Query 023020
Match_columns 288
No_of_seqs 278 out of 1841
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 07:51:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023020.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023020hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2183 Prolylcarboxypeptidase 100.0 1.1E-57 2.5E-62 426.1 21.0 219 66-288 43-261 (492)
2 PF05577 Peptidase_S28: Serine 100.0 2.1E-56 4.6E-61 433.3 21.7 203 75-288 1-204 (434)
3 KOG2182 Hydrolytic enzymes of 100.0 4.5E-53 9.8E-58 403.9 18.8 213 65-288 48-263 (514)
4 PF05576 Peptidase_S37: PS-10 99.9 2.8E-23 6.1E-28 196.1 12.3 171 68-268 31-203 (448)
5 PLN02385 hydrolase; alpha/beta 99.6 6.7E-15 1.5E-19 138.7 14.2 109 104-227 86-195 (349)
6 PLN02298 hydrolase, alpha/beta 99.6 8.8E-15 1.9E-19 136.4 14.0 111 105-229 59-169 (330)
7 KOG1455 Lysophospholipase [Lip 99.6 1.4E-14 3.1E-19 132.7 14.1 141 75-234 27-168 (313)
8 COG2267 PldB Lysophospholipase 99.6 4.4E-14 9.5E-19 131.4 13.8 108 106-229 35-142 (298)
9 PRK10749 lysophospholipase L2; 99.6 4.3E-14 9.2E-19 132.5 13.4 113 104-228 53-165 (330)
10 TIGR02240 PHA_depoly_arom poly 99.6 3.3E-14 7.1E-19 129.0 11.8 101 106-229 26-126 (276)
11 PLN02824 hydrolase, alpha/beta 99.5 5.8E-14 1.2E-18 128.4 12.1 109 105-229 29-137 (294)
12 PRK00870 haloalkane dehalogena 99.5 1.2E-13 2.6E-18 127.1 13.7 103 105-227 46-148 (302)
13 PHA02857 monoglyceride lipase; 99.5 2.4E-13 5.3E-18 122.9 14.4 109 105-230 25-133 (276)
14 TIGR01250 pro_imino_pep_2 prol 99.5 1.3E-13 2.9E-18 122.1 12.0 105 105-227 25-129 (288)
15 PF12697 Abhydrolase_6: Alpha/ 99.5 1.3E-13 2.7E-18 117.2 11.2 102 108-230 1-102 (228)
16 PRK10673 acyl-CoA esterase; Pr 99.5 1.7E-13 3.6E-18 121.7 12.1 102 104-229 15-117 (255)
17 PLN02965 Probable pheophorbida 99.5 1.3E-13 2.7E-18 124.0 10.6 103 106-228 4-106 (255)
18 PRK03592 haloalkane dehalogena 99.5 1.5E-13 3.2E-18 125.7 10.5 102 105-229 27-128 (295)
19 TIGR03343 biphenyl_bphD 2-hydr 99.5 2.6E-13 5.6E-18 122.4 10.4 106 105-228 30-135 (282)
20 TIGR01607 PST-A Plasmodium sub 99.5 7.1E-13 1.5E-17 124.8 12.7 117 103-229 19-185 (332)
21 TIGR01249 pro_imino_pep_1 prol 99.4 4.2E-13 9E-18 124.2 9.3 104 105-229 27-130 (306)
22 TIGR03056 bchO_mg_che_rel puta 99.4 9.9E-13 2.1E-17 117.5 10.9 103 105-229 28-130 (278)
23 PRK06489 hypothetical protein; 99.4 3E-12 6.5E-17 121.4 14.7 111 105-227 69-187 (360)
24 PRK11126 2-succinyl-6-hydroxy- 99.4 1.1E-12 2.4E-17 115.7 10.9 99 106-229 3-102 (242)
25 PRK10349 carboxylesterase BioH 99.4 1.1E-12 2.4E-17 117.3 10.2 93 107-227 15-107 (256)
26 TIGR03611 RutD pyrimidine util 99.4 1.1E-12 2.5E-17 114.7 9.9 100 106-227 14-113 (257)
27 PLN02211 methyl indole-3-aceta 99.4 1.9E-12 4.2E-17 118.4 11.7 103 106-228 19-121 (273)
28 PRK03204 haloalkane dehalogena 99.4 2.2E-12 4.8E-17 118.5 11.6 103 105-229 34-136 (286)
29 TIGR02427 protocat_pcaD 3-oxoa 99.4 1.3E-12 2.8E-17 113.1 8.9 100 107-229 15-114 (251)
30 PRK08775 homoserine O-acetyltr 99.4 1.1E-12 2.3E-17 123.5 8.7 104 105-227 57-171 (343)
31 TIGR03695 menH_SHCHC 2-succiny 99.4 2.4E-12 5.1E-17 110.9 10.0 102 106-228 2-104 (251)
32 PLN02679 hydrolase, alpha/beta 99.4 2.7E-12 5.8E-17 121.9 10.8 101 106-228 89-190 (360)
33 PLN02578 hydrolase 99.4 3.6E-12 7.7E-17 120.7 11.0 99 105-226 86-184 (354)
34 PLN03087 BODYGUARD 1 domain co 99.4 4E-12 8.6E-17 125.3 11.3 107 105-230 201-310 (481)
35 PLN02652 hydrolase; alpha/beta 99.4 1.1E-11 2.4E-16 119.6 14.1 106 105-229 136-245 (395)
36 TIGR03101 hydr2_PEP hydrolase, 99.4 1.8E-11 3.8E-16 112.3 14.6 109 105-229 25-134 (266)
37 PLN02511 hydrolase 99.3 6.1E-12 1.3E-16 120.9 11.7 108 106-230 101-211 (388)
38 PLN02894 hydrolase, alpha/beta 99.3 1.2E-11 2.6E-16 119.5 13.3 109 98-228 98-210 (402)
39 TIGR01738 bioH putative pimelo 99.3 4.3E-12 9.4E-17 109.6 9.3 93 106-226 5-97 (245)
40 PLN03084 alpha/beta hydrolase 99.3 8.9E-12 1.9E-16 119.8 11.6 107 105-230 127-233 (383)
41 KOG2564 Predicted acetyltransf 99.3 1E-11 2.2E-16 112.9 11.0 131 70-224 44-177 (343)
42 KOG4178 Soluble epoxide hydrol 99.2 5.7E-11 1.2E-15 110.3 11.5 117 90-230 32-149 (322)
43 TIGR01392 homoserO_Ac_trn homo 99.2 4.9E-11 1.1E-15 112.6 10.8 118 106-229 32-162 (351)
44 TIGR01840 esterase_phb esteras 99.2 6.9E-11 1.5E-15 103.9 11.1 116 107-229 15-130 (212)
45 KOG4409 Predicted hydrolase/ac 99.2 4.8E-11 1E-15 111.5 9.4 104 104-227 89-193 (365)
46 PRK14875 acetoin dehydrogenase 99.2 9.3E-11 2E-15 110.1 10.8 101 105-228 131-231 (371)
47 PRK10985 putative hydrolase; P 99.2 1.8E-10 3.8E-15 107.8 11.4 109 106-230 59-169 (324)
48 PRK07581 hypothetical protein; 99.2 1.2E-10 2.6E-15 109.0 9.8 87 135-227 70-157 (339)
49 PLN02980 2-oxoglutarate decarb 99.2 2E-10 4.4E-15 127.6 13.0 122 91-227 1357-1478(1655)
50 KOG2382 Predicted alpha/beta h 99.2 5.5E-10 1.2E-14 103.8 13.6 145 105-272 52-201 (315)
51 PF00561 Abhydrolase_1: alpha/ 99.2 9.9E-11 2.1E-15 101.1 8.2 78 137-228 1-78 (230)
52 PRK10566 esterase; Provisional 99.2 2.8E-10 6.2E-15 101.3 11.2 107 106-223 28-136 (249)
53 TIGR03100 hydr1_PEP hydrolase, 99.1 5.7E-10 1.2E-14 102.1 12.8 108 106-230 27-135 (274)
54 PRK05855 short chain dehydroge 99.1 2.7E-10 5.9E-15 112.9 9.8 104 105-228 25-130 (582)
55 PRK00175 metX homoserine O-ace 99.0 1.8E-09 3.8E-14 103.4 10.9 117 106-228 49-181 (379)
56 TIGR01836 PHA_synth_III_C poly 99.0 2E-09 4.3E-14 101.7 10.6 109 105-231 62-173 (350)
57 PRK05077 frsA fermentation/res 99.0 3.8E-09 8.2E-14 102.6 11.6 108 105-230 193-301 (414)
58 KOG1454 Predicted hydrolase/ac 99.0 3.6E-09 7.9E-14 99.7 10.6 109 104-231 57-168 (326)
59 PF12695 Abhydrolase_5: Alpha/ 99.0 6E-09 1.3E-13 84.5 10.2 93 107-227 1-93 (145)
60 TIGR03230 lipo_lipase lipoprot 98.9 1E-08 2.3E-13 100.0 12.8 109 105-226 41-151 (442)
61 TIGR02821 fghA_ester_D S-formy 98.9 3.1E-08 6.7E-13 90.7 14.0 120 106-229 42-173 (275)
62 COG0596 MhpC Predicted hydrola 98.9 5.2E-09 1.1E-13 88.9 8.3 101 106-229 22-123 (282)
63 PRK13604 luxD acyl transferase 98.9 2.2E-08 4.8E-13 93.4 12.7 103 105-228 37-140 (307)
64 KOG1552 Predicted alpha/beta h 98.9 2.2E-08 4.7E-13 90.5 10.8 101 106-227 61-161 (258)
65 cd00707 Pancreat_lipase_like P 98.8 1.6E-08 3.4E-13 93.1 9.9 107 106-225 37-143 (275)
66 PLN02872 triacylglycerol lipas 98.8 8.8E-09 1.9E-13 99.5 7.7 111 105-225 74-193 (395)
67 COG1647 Esterase/lipase [Gener 98.8 1.9E-07 4E-12 82.8 13.3 107 106-233 16-122 (243)
68 TIGR00976 /NonD putative hydro 98.7 4.7E-08 1E-12 98.1 10.0 109 106-229 22-132 (550)
69 KOG4391 Predicted alpha/beta h 98.7 1.1E-08 2.3E-13 90.5 4.6 102 106-225 79-180 (300)
70 PF12146 Hydrolase_4: Putative 98.7 3.8E-08 8.1E-13 74.1 6.6 66 99-183 9-79 (79)
71 TIGR03502 lipase_Pla1_cef extr 98.7 6.2E-08 1.3E-12 100.2 10.4 103 107-214 451-575 (792)
72 PLN02442 S-formylglutathione h 98.7 6.4E-07 1.4E-11 82.6 14.5 120 105-229 46-178 (283)
73 PRK10162 acetyl esterase; Prov 98.6 2.6E-07 5.6E-12 86.6 10.9 104 107-229 83-195 (318)
74 PRK11071 esterase YqiA; Provis 98.6 1.6E-07 3.4E-12 81.7 8.5 89 107-229 3-93 (190)
75 PF10503 Esterase_phd: Esteras 98.6 6.3E-07 1.4E-11 80.1 12.2 116 106-229 16-132 (220)
76 PLN00021 chlorophyllase 98.6 4E-07 8.6E-12 85.4 10.9 98 106-226 53-163 (313)
77 PF07859 Abhydrolase_3: alpha/ 98.6 1.9E-07 4.1E-12 81.1 8.1 103 108-229 1-110 (211)
78 PRK11460 putative hydrolase; P 98.6 7.8E-07 1.7E-11 79.7 11.9 116 106-228 17-137 (232)
79 COG0429 Predicted hydrolase of 98.6 9.1E-07 2E-11 82.7 12.4 123 88-230 61-186 (345)
80 PF07819 PGAP1: PGAP1-like pro 98.5 2.4E-06 5.1E-11 76.6 13.5 40 192-231 83-125 (225)
81 TIGR01838 PHA_synth_I poly(R)- 98.5 8.8E-07 1.9E-11 88.6 10.7 108 105-230 188-303 (532)
82 PF00326 Peptidase_S9: Prolyl 98.4 3.8E-07 8.2E-12 79.7 6.5 91 131-229 9-99 (213)
83 COG1506 DAP2 Dipeptidyl aminop 98.4 1.1E-06 2.5E-11 89.5 10.8 110 107-230 395-508 (620)
84 PF00975 Thioesterase: Thioest 98.4 1.2E-06 2.7E-11 76.8 9.3 97 106-228 1-103 (229)
85 PRK06765 homoserine O-acetyltr 98.3 3.9E-06 8.4E-11 81.1 9.2 86 136-227 99-194 (389)
86 PF05677 DUF818: Chlamydia CHL 98.3 5.7E-06 1.2E-10 77.8 9.9 98 104-216 136-237 (365)
87 PRK07868 acyl-CoA synthetase; 98.2 7.5E-06 1.6E-10 87.7 11.6 109 105-230 67-178 (994)
88 PF10230 DUF2305: Uncharacteri 98.2 1.8E-05 3.8E-10 72.6 12.3 114 107-229 4-122 (266)
89 COG3509 LpqC Poly(3-hydroxybut 98.1 3.7E-05 8.1E-10 71.0 12.3 113 106-224 61-174 (312)
90 PRK10115 protease 2; Provision 98.1 1.1E-05 2.4E-10 83.2 9.5 110 106-229 445-559 (686)
91 KOG1838 Alpha/beta hydrolase [ 98.1 2.9E-05 6.3E-10 74.8 10.6 108 106-230 125-236 (409)
92 COG2021 MET2 Homoserine acetyl 98.0 5.8E-05 1.2E-09 71.7 11.9 129 107-250 53-200 (368)
93 KOG1553 Predicted alpha/beta h 98.0 6.9E-05 1.5E-09 70.6 10.8 83 126-225 259-341 (517)
94 PLN02733 phosphatidylcholine-s 98.0 3.4E-05 7.4E-10 75.7 9.2 85 128-230 114-202 (440)
95 PTZ00472 serine carboxypeptida 98.0 0.00011 2.5E-09 72.5 13.0 84 136-229 121-216 (462)
96 COG0657 Aes Esterase/lipase [L 98.0 7.5E-05 1.6E-09 69.3 11.0 105 106-229 80-191 (312)
97 PF00756 Esterase: Putative es 97.9 0.00018 3.9E-09 64.1 12.4 49 180-228 101-149 (251)
98 PF06500 DUF1100: Alpha/beta h 97.9 2.2E-05 4.9E-10 75.9 6.2 110 105-231 189-298 (411)
99 PRK10252 entF enterobactin syn 97.9 9.1E-05 2E-09 80.8 11.5 96 105-226 1068-1168(1296)
100 PF06342 DUF1057: Alpha/beta h 97.8 0.00033 7.2E-09 64.6 12.9 102 105-228 35-136 (297)
101 PF01674 Lipase_2: Lipase (cla 97.8 5.1E-05 1.1E-09 67.8 7.2 92 106-215 2-96 (219)
102 PF02129 Peptidase_S15: X-Pro 97.8 7.2E-05 1.6E-09 68.2 8.4 85 131-230 53-137 (272)
103 KOG4667 Predicted esterase [Li 97.8 0.00011 2.3E-09 65.3 8.5 107 105-229 33-139 (269)
104 KOG2281 Dipeptidyl aminopeptid 97.7 0.00014 3E-09 73.2 8.9 117 103-230 639-762 (867)
105 PF05448 AXE1: Acetyl xylan es 97.7 0.00025 5.4E-09 66.8 9.9 115 106-226 83-206 (320)
106 PF01738 DLH: Dienelactone hyd 97.7 6.9E-05 1.5E-09 65.8 5.8 112 106-227 15-130 (218)
107 PF09752 DUF2048: Uncharacteri 97.6 0.00096 2.1E-08 63.2 12.9 140 67-220 52-201 (348)
108 KOG2984 Predicted hydrolase [G 97.6 4E-05 8.7E-10 67.5 3.2 104 106-226 43-146 (277)
109 TIGR01839 PHA_synth_II poly(R) 97.6 0.00044 9.5E-09 69.5 10.3 108 105-230 215-329 (560)
110 COG0400 Predicted esterase [Ge 97.6 0.0003 6.6E-09 62.3 8.2 55 173-227 78-132 (207)
111 KOG1515 Arylacetamide deacetyl 97.5 0.00094 2E-08 63.4 11.6 139 71-231 62-209 (336)
112 COG0412 Dienelactone hydrolase 97.5 0.00078 1.7E-08 60.7 10.3 113 107-225 28-142 (236)
113 PF08538 DUF1749: Protein of u 97.5 0.0028 6.2E-08 59.1 13.3 110 106-235 33-153 (303)
114 COG3319 Thioesterase domains o 97.4 0.00052 1.1E-08 62.8 8.1 96 107-226 2-100 (257)
115 COG4099 Predicted peptidase [G 97.4 0.00084 1.8E-08 62.3 9.3 43 184-226 259-301 (387)
116 cd00312 Esterase_lipase Estera 97.4 0.00047 1E-08 68.0 8.2 110 105-230 94-214 (493)
117 PF06821 Ser_hydrolase: Serine 97.4 0.0014 3E-08 56.3 9.5 53 178-230 39-92 (171)
118 PRK05371 x-prolyl-dipeptidyl a 97.3 0.0014 3E-08 68.7 10.8 81 134-227 277-371 (767)
119 PF11144 DUF2920: Protein of u 97.3 0.0034 7.3E-08 60.7 12.0 54 177-230 165-220 (403)
120 COG4757 Predicted alpha/beta h 97.3 0.0011 2.3E-08 59.6 8.0 73 130-212 51-123 (281)
121 PF00450 Peptidase_S10: Serine 97.3 0.0022 4.7E-08 61.4 10.7 86 136-230 85-182 (415)
122 KOG4627 Kynurenine formamidase 97.2 0.0027 5.9E-08 56.2 9.5 102 105-228 66-171 (270)
123 COG2945 Predicted hydrolase of 97.1 0.0047 1E-07 54.0 9.7 106 105-230 27-138 (210)
124 COG3208 GrsT Predicted thioest 97.1 0.0022 4.8E-08 57.9 8.0 76 137-229 34-114 (244)
125 PF03403 PAF-AH_p_II: Platelet 97.0 0.0018 4E-08 62.4 7.3 119 106-229 100-262 (379)
126 PF12715 Abhydrolase_7: Abhydr 97.0 0.0042 9.1E-08 59.7 9.5 95 128-228 153-259 (390)
127 PF12740 Chlorophyllase2: Chlo 97.0 0.0049 1.1E-07 56.4 9.5 102 106-230 17-131 (259)
128 KOG2100 Dipeptidyl aminopeptid 97.0 0.0016 3.4E-08 68.2 7.0 117 105-230 525-644 (755)
129 PF03096 Ndr: Ndr family; Int 96.9 0.0037 7.9E-08 57.9 8.1 105 105-226 22-131 (283)
130 PF05057 DUF676: Putative seri 96.9 0.0032 6.9E-08 55.9 7.5 44 170-213 54-97 (217)
131 COG2819 Predicted hydrolase of 96.9 0.011 2.4E-07 54.1 11.0 44 187-230 130-173 (264)
132 KOG2565 Predicted hydrolases o 96.9 0.0027 5.9E-08 60.6 6.7 106 105-230 152-265 (469)
133 PF02230 Abhydrolase_2: Phosph 96.8 0.0035 7.6E-08 55.1 6.6 59 171-230 83-141 (216)
134 smart00824 PKS_TE Thioesterase 96.6 0.021 4.6E-07 48.1 9.9 72 136-226 25-99 (212)
135 PF06028 DUF915: Alpha/beta hy 96.5 0.011 2.4E-07 54.0 8.2 61 170-232 81-146 (255)
136 PF06259 Abhydrolase_8: Alpha/ 96.5 0.008 1.7E-07 52.0 6.7 58 171-229 87-144 (177)
137 PF00135 COesterase: Carboxyle 96.5 0.033 7.1E-07 54.8 11.8 113 105-230 124-246 (535)
138 cd00741 Lipase Lipase. Lipase 96.5 0.01 2.3E-07 49.2 7.1 54 174-229 10-67 (153)
139 PF00151 Lipase: Lipase; Inte 96.4 0.0043 9.3E-08 58.8 5.1 107 106-225 72-183 (331)
140 PF06057 VirJ: Bacterial virul 96.4 0.012 2.7E-07 51.4 7.5 81 126-226 20-104 (192)
141 COG1075 LipA Predicted acetylt 96.4 0.0075 1.6E-07 57.2 6.7 101 106-230 60-165 (336)
142 COG3571 Predicted hydrolase of 96.4 0.026 5.6E-07 48.4 9.1 104 106-231 15-126 (213)
143 PLN03016 sinapoylglucose-malat 96.4 0.11 2.4E-06 51.0 15.0 84 136-229 115-210 (433)
144 KOG2931 Differentiation-relate 96.4 0.055 1.2E-06 50.3 11.8 82 129-226 73-154 (326)
145 PF03583 LIP: Secretory lipase 96.4 0.029 6.4E-07 52.0 10.2 82 134-229 24-113 (290)
146 PF02450 LCAT: Lecithin:choles 96.4 0.0072 1.6E-07 58.4 6.4 57 171-230 99-161 (389)
147 PRK10439 enterobactin/ferric e 96.4 0.0092 2E-07 58.2 7.0 48 182-229 274-323 (411)
148 PF05728 UPF0227: Uncharacteri 96.3 0.019 4E-07 50.1 8.1 46 170-223 41-86 (187)
149 PF01764 Lipase_3: Lipase (cla 96.3 0.012 2.6E-07 47.6 6.2 38 177-216 49-86 (140)
150 PF10340 DUF2424: Protein of u 96.2 0.043 9.3E-07 52.8 10.5 122 89-231 105-237 (374)
151 PLN02209 serine carboxypeptida 96.2 0.08 1.7E-06 52.1 12.7 85 136-230 117-213 (437)
152 cd00519 Lipase_3 Lipase (class 96.2 0.013 2.7E-07 52.0 6.5 56 172-229 108-168 (229)
153 COG4188 Predicted dienelactone 96.1 0.019 4.1E-07 54.8 7.5 102 106-217 71-182 (365)
154 KOG2624 Triglyceride lipase-ch 96.1 0.014 3.1E-07 56.7 6.8 118 104-229 72-199 (403)
155 KOG3724 Negative regulator of 96.1 0.059 1.3E-06 56.0 11.2 36 195-231 183-222 (973)
156 PF05990 DUF900: Alpha/beta hy 96.0 0.039 8.6E-07 49.6 8.8 92 105-212 18-111 (233)
157 PLN02454 triacylglycerol lipas 96.0 0.026 5.7E-07 54.9 7.8 42 173-214 207-248 (414)
158 PRK04940 hypothetical protein; 95.9 0.051 1.1E-06 47.2 8.7 56 171-231 39-94 (180)
159 COG3458 Acetyl esterase (deace 95.8 0.038 8.2E-07 51.0 7.7 115 106-226 83-207 (321)
160 COG1770 PtrB Protease II [Amin 95.7 0.08 1.7E-06 54.0 10.3 145 71-230 402-563 (682)
161 COG2272 PnbA Carboxylesterase 95.5 0.025 5.4E-07 55.8 5.9 112 105-229 93-217 (491)
162 COG0627 Predicted esterase [Ge 95.5 0.057 1.2E-06 50.9 8.1 122 105-231 53-189 (316)
163 KOG3847 Phospholipase A2 (plat 95.5 0.054 1.2E-06 50.9 7.6 37 193-230 240-276 (399)
164 KOG3101 Esterase D [General fu 95.5 0.015 3.2E-07 51.8 3.7 121 104-230 42-176 (283)
165 PF11187 DUF2974: Protein of u 95.3 0.035 7.6E-07 49.8 5.7 51 177-230 70-124 (224)
166 PF08840 BAAT_C: BAAT / Acyl-C 95.3 0.038 8.3E-07 48.8 5.9 46 183-229 11-56 (213)
167 PF07224 Chlorophyllase: Chlor 95.3 0.1 2.2E-06 48.0 8.5 88 106-216 46-142 (307)
168 PLN02571 triacylglycerol lipas 95.1 0.078 1.7E-06 51.7 7.8 39 172-214 208-246 (413)
169 KOG2369 Lecithin:cholesterol a 95.0 0.025 5.4E-07 55.5 4.1 58 171-230 161-226 (473)
170 COG3150 Predicted esterase [Ge 94.8 0.14 3E-06 44.1 7.3 91 108-230 2-92 (191)
171 KOG4840 Predicted hydrolases o 94.6 0.077 1.7E-06 47.7 5.7 107 106-230 36-144 (299)
172 COG4814 Uncharacterized protei 94.4 0.32 7E-06 44.5 9.4 116 106-230 46-177 (288)
173 PLN02310 triacylglycerol lipas 94.4 0.097 2.1E-06 50.9 6.4 57 171-229 188-248 (405)
174 COG4782 Uncharacterized protei 94.3 0.22 4.9E-06 47.6 8.4 42 169-212 168-209 (377)
175 COG2939 Carboxypeptidase C (ca 94.3 0.13 2.9E-06 50.9 7.1 84 136-229 146-236 (498)
176 PLN02213 sinapoylglucose-malat 94.2 0.15 3.3E-06 47.8 7.3 84 137-230 2-97 (319)
177 PLN02324 triacylglycerol lipas 94.1 0.19 4.1E-06 49.0 7.6 38 172-213 197-234 (415)
178 COG3545 Predicted esterase of 93.9 0.12 2.6E-06 44.7 5.2 38 193-230 58-95 (181)
179 TIGR01849 PHB_depoly_PhaZ poly 93.7 0.51 1.1E-05 46.1 9.9 104 106-232 103-211 (406)
180 PLN02162 triacylglycerol lipas 93.7 0.18 4E-06 49.7 6.8 21 192-212 276-296 (475)
181 PLN03037 lipase class 3 family 93.6 0.16 3.5E-06 50.7 6.3 40 172-213 298-337 (525)
182 KOG1282 Serine carboxypeptidas 93.3 0.74 1.6E-05 45.6 10.4 85 136-229 117-213 (454)
183 PLN02517 phosphatidylcholine-s 93.2 0.14 3.1E-06 52.0 5.3 57 172-230 193-264 (642)
184 COG2936 Predicted acyl esteras 93.1 0.19 4E-06 50.8 6.0 83 134-230 78-160 (563)
185 PLN00413 triacylglycerol lipas 93.0 0.27 5.9E-06 48.7 6.9 22 192-213 282-303 (479)
186 PLN02761 lipase class 3 family 92.9 0.23 4.9E-06 49.7 6.1 21 193-213 293-313 (527)
187 PF07519 Tannase: Tannase and 92.8 0.2 4.3E-06 49.9 5.8 56 174-230 94-150 (474)
188 PLN02408 phospholipase A1 92.7 0.23 5E-06 47.7 5.7 39 172-214 182-220 (365)
189 PLN02633 palmitoyl protein thi 92.6 1.7 3.7E-05 40.9 11.2 110 105-235 25-137 (314)
190 KOG2237 Predicted serine prote 92.2 0.19 4.2E-06 51.2 4.6 109 106-229 470-584 (712)
191 PF12048 DUF3530: Protein of u 92.1 4.1 8.9E-05 38.2 13.3 135 91-230 73-230 (310)
192 PF11339 DUF3141: Protein of u 91.9 2 4.4E-05 43.1 11.3 62 170-232 117-178 (581)
193 PLN02753 triacylglycerol lipas 91.8 0.37 8.1E-06 48.2 6.2 41 172-213 291-331 (531)
194 PLN02802 triacylglycerol lipas 91.8 0.3 6.5E-06 48.7 5.4 26 188-213 324-349 (509)
195 PF03959 FSH1: Serine hydrolas 91.6 1.5 3.3E-05 38.4 9.3 116 106-229 5-145 (212)
196 PLN02934 triacylglycerol lipas 91.1 0.36 7.9E-06 48.1 5.3 21 192-212 319-339 (515)
197 KOG3967 Uncharacterized conser 90.9 2.3 5.1E-05 38.2 9.5 119 93-230 91-228 (297)
198 PLN02719 triacylglycerol lipas 90.8 0.51 1.1E-05 47.2 6.0 20 194-213 298-317 (518)
199 PLN02606 palmitoyl-protein thi 90.0 3.6 7.7E-05 38.7 10.5 110 106-236 27-139 (306)
200 PF07082 DUF1350: Protein of u 89.9 2.4 5.2E-05 38.7 9.1 100 108-226 19-122 (250)
201 PF02089 Palm_thioest: Palmito 89.8 1 2.2E-05 41.8 6.8 114 105-235 5-122 (279)
202 COG2382 Fes Enterochelin ester 89.2 0.28 6.1E-06 45.7 2.6 50 181-230 162-213 (299)
203 KOG4569 Predicted lipase [Lipi 89.1 0.62 1.3E-05 44.3 4.9 20 193-212 170-189 (336)
204 PLN02847 triacylglycerol lipas 89.1 0.62 1.3E-05 47.4 5.1 22 192-213 249-270 (633)
205 KOG4388 Hormone-sensitive lipa 88.8 1.3 2.8E-05 45.1 7.0 117 98-230 387-509 (880)
206 COG4947 Uncharacterized protei 88.6 1.8 4E-05 37.6 6.9 37 195-231 102-138 (227)
207 PF01083 Cutinase: Cutinase; 88.6 1.2 2.6E-05 38.4 5.9 60 170-231 59-124 (179)
208 COG3243 PhaC Poly(3-hydroxyalk 88.4 1.7 3.8E-05 42.4 7.4 108 105-230 107-218 (445)
209 KOG4540 Putative lipase essent 88.2 0.84 1.8E-05 42.6 4.9 33 182-216 266-298 (425)
210 COG5153 CVT17 Putative lipase 88.2 0.84 1.8E-05 42.6 4.9 33 182-216 266-298 (425)
211 KOG1516 Carboxylesterase and r 87.4 1.7 3.6E-05 43.5 7.0 112 106-230 112-233 (545)
212 KOG2541 Palmitoyl protein thio 85.2 13 0.00029 34.4 10.9 112 106-237 24-136 (296)
213 PF11288 DUF3089: Protein of u 84.7 2.5 5.5E-05 37.5 6.0 43 172-215 74-116 (207)
214 KOG3975 Uncharacterized conser 84.5 16 0.00035 33.6 11.0 108 87-213 15-129 (301)
215 KOG2112 Lysophospholipase [Lip 83.8 2.8 6.2E-05 37.1 5.8 56 172-228 72-127 (206)
216 COG1505 Serine proteases of th 83.4 0.99 2.1E-05 45.9 3.1 87 134-229 448-534 (648)
217 KOG1283 Serine carboxypeptidas 80.2 3.8 8.3E-05 38.9 5.5 71 136-216 71-144 (414)
218 PF02273 Acyl_transf_2: Acyl t 77.7 44 0.00096 30.8 11.3 104 106-230 30-135 (294)
219 COG3946 VirJ Type IV secretory 77.0 9.5 0.00021 37.3 7.3 57 134-210 285-342 (456)
220 KOG1202 Animal-type fatty acid 76.1 55 0.0012 36.8 13.1 79 105-214 2123-2202(2376)
221 KOG1551 Uncharacterized conser 75.3 3 6.5E-05 38.7 3.3 121 85-220 99-221 (371)
222 PLN02748 tRNA dimethylallyltra 71.6 18 0.0004 36.0 8.1 87 105-202 21-120 (468)
223 TIGR03712 acc_sec_asp2 accesso 71.3 16 0.00035 36.5 7.5 94 103-217 286-381 (511)
224 PRK00091 miaA tRNA delta(2)-is 69.9 25 0.00054 33.0 8.2 88 106-202 4-102 (307)
225 PF08237 PE-PPE: PE-PPE domain 66.5 18 0.00039 32.4 6.3 46 169-214 23-68 (225)
226 PF05705 DUF829: Eukaryotic pr 66.0 70 0.0015 28.1 10.1 103 107-230 1-113 (240)
227 PF05277 DUF726: Protein of un 62.5 18 0.0004 34.6 5.9 40 192-231 218-262 (345)
228 PLN02840 tRNA dimethylallyltra 61.1 48 0.001 32.7 8.5 88 105-202 20-119 (421)
229 COG0324 MiaA tRNA delta(2)-iso 60.2 41 0.00088 31.7 7.6 89 107-204 4-103 (308)
230 TIGR00174 miaA tRNA isopenteny 55.6 48 0.001 30.9 7.3 87 108-203 1-98 (287)
231 KOG3043 Predicted hydrolase re 52.3 7 0.00015 35.3 1.1 90 128-224 60-149 (242)
232 KOG2029 Uncharacterized conser 51.1 22 0.00047 36.6 4.4 39 192-230 524-573 (697)
233 PRK08118 topology modulation p 48.3 94 0.002 26.1 7.4 35 109-148 4-38 (167)
234 KOG3253 Predicted alpha/beta h 48.2 50 0.0011 34.2 6.4 63 169-231 223-288 (784)
235 PLN02165 adenylate isopentenyl 46.2 92 0.002 29.7 7.6 89 106-203 43-143 (334)
236 PF03283 PAE: Pectinacetyleste 43.8 1.1E+02 0.0025 29.3 8.0 50 180-230 142-197 (361)
237 PF11713 Peptidase_C80: Peptid 42.1 28 0.0006 29.4 3.1 42 165-206 73-116 (157)
238 PF04083 Abhydro_lipase: Parti 40.4 24 0.00051 25.2 2.1 18 104-121 42-59 (63)
239 PRK14729 miaA tRNA delta(2)-is 39.9 2E+02 0.0043 27.0 8.8 85 106-202 4-101 (300)
240 PF02419 PsbL: PsbL protein; 34.5 48 0.001 21.1 2.5 21 8-28 13-33 (37)
241 PRK00753 psbL photosystem II r 33.2 46 0.00099 21.3 2.3 20 8-27 15-34 (39)
242 CHL00038 psbL photosystem II p 32.7 45 0.00098 21.3 2.2 21 8-28 14-34 (38)
243 PHA02595 tk.4 hypothetical pro 32.0 24 0.00053 29.5 1.2 20 201-220 29-48 (154)
244 PF08484 Methyltransf_14: C-me 28.4 1.6E+02 0.0035 24.8 5.7 49 171-223 50-98 (160)
245 PRK02399 hypothetical protein; 27.8 3E+02 0.0064 27.1 8.0 72 195-268 98-172 (406)
246 PF03489 SapB_2: Saposin-like 27.8 1.4E+02 0.0031 17.9 4.0 34 254-287 2-35 (35)
247 PRK14905 triosephosphate isome 24.1 6.5E+02 0.014 24.2 9.8 122 136-283 168-294 (355)
248 COG3887 Predicted signaling pr 22.0 2.2E+02 0.0047 29.5 6.0 17 194-210 338-360 (655)
249 PF13207 AAA_17: AAA domain; P 21.5 1.3E+02 0.0027 23.0 3.5 32 108-144 1-32 (121)
250 PF07992 Pyr_redox_2: Pyridine 21.4 88 0.0019 26.0 2.8 20 195-214 1-20 (201)
251 PF08874 DUF1835: Domain of un 21.0 4.1E+02 0.0088 20.7 6.8 35 197-231 3-40 (124)
No 1
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=1.1e-57 Score=426.13 Aligned_cols=219 Identities=65% Similarity=1.175 Sum_probs=209.9
Q ss_pred CcceeeEEEeecCCCCCCCCCeEEEEEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc
Q 023020 66 YRYETRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR 145 (288)
Q Consensus 66 ~~~~~~~f~Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR 145 (288)
.++++.||.|+||||++.+..||.|||++|++||++++ +|||||+|+||+++++..|+||+.++|.++++.+|+.|||
T Consensus 43 ~~ye~~yf~q~LDHFsF~~~~tF~qRylin~~fw~~g~--gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHR 120 (492)
T KOG2183|consen 43 YNYETRYFQQPLDHFSFTDNKTFDQRYLINDDFWKKGE--GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHR 120 (492)
T ss_pred ccceeEEeecccccccccCccceeeEEEEecccccCCC--CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehh
Confidence 46899999999999999988999999999999998744 8999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEe
Q 023020 146 YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALAS 225 (288)
Q Consensus 146 gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vas 225 (288)
|||+|.|+++. ++++.+.|.|||+|||++|.+.+++++|.+......|+|+||||||||||||||+||||.|.|++++
T Consensus 121 yYGeS~PFG~~--s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAa 198 (492)
T KOG2183|consen 121 YYGESLPFGSQ--SYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAA 198 (492)
T ss_pred ccccCCCCcch--hccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhc
Confidence 99999999974 6778889999999999999999999999988777889999999999999999999999999999999
Q ss_pred cCccccccCCCChhhHHHHHHHHhhhcCcchHHHHHHHHHHHHHHhcCcccHHHHHHhcCCCC
Q 023020 226 SAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFHLCR 288 (288)
Q Consensus 226 Sapv~~~~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~f~~C~ 288 (288)
||||..+++.++...|+.+|+++|+..+++|...|++++++|+++..+++|++.|++.|++|.
T Consensus 199 SAPvl~f~d~vp~~~f~~ivT~~F~~as~~C~~~I~~sW~ai~~l~~~~nG~q~Ls~~f~lc~ 261 (492)
T KOG2183|consen 199 SAPVLYFEDTVPKDVFYRIVTRDFKDASPNCRNTIRKSWDAIDRLAAKDNGLQILSKAFKLCK 261 (492)
T ss_pred cCceEeecCCCCcchhhhHHHHHHHhhcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999994
No 2
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=100.00 E-value=2.1e-56 Score=433.25 Aligned_cols=203 Identities=46% Similarity=0.845 Sum_probs=171.1
Q ss_pred eecCCCCCCCCCeEEEEEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCC
Q 023020 75 QRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG 154 (288)
Q Consensus 75 Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~ 154 (288)
|+||||++.+.+||+||||+|++||+++ +||||+.|||++++.+....+++.++|+++|+.||++||||||+|.|++
T Consensus 1 Q~lDHf~~~~~~tf~qRY~~n~~~~~~~---gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~ 77 (434)
T PF05577_consen 1 QPLDHFNPSNNGTFSQRYWVNDQYYKPG---GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFG 77 (434)
T ss_dssp EES-SS-SSTT-EEEEEEEEE-TT--TT---SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTG
T ss_pred CCCCCCCCCCCCeEEEEEEEEhhhcCCC---CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCcc
Confidence 8999999988899999999999999753 8999999999999987777889999999999999999999999999999
Q ss_pred CccccccccccCCccCHHHHHHHHHHHHHHHHHhc-CCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccccc
Q 023020 155 STEVAYQNATTLSYLTAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE 233 (288)
Q Consensus 155 ~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~-~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~~~ 233 (288)
++ +++||+|||++|||+|+++|+++++.++ ..++.|||++||||||+||+|+|+||||+|+|+|+|||||.+
T Consensus 78 ~~-----s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a-- 150 (434)
T PF05577_consen 78 DL-----STENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA-- 150 (434)
T ss_dssp GG-----GGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH--
T ss_pred cc-----chhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee--
Confidence 87 8999999999999999999999999776 346679999999999999999999999999999999999986
Q ss_pred CCCChhhHHHHHHHHhhhcCcchHHHHHHHHHHHHHHhcCcccHHHHHHhcCCCC
Q 023020 234 DIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFHLCR 288 (288)
Q Consensus 234 ~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~f~~C~ 288 (288)
+.||++|+++|++++...+++|+++|++++++|++++.++.++++|+++|++|.
T Consensus 151 -~~df~~y~~~v~~~~~~~~~~C~~~i~~a~~~i~~~~~~~~~~~~l~~~f~~~~ 204 (434)
T PF05577_consen 151 -KVDFWEYFEVVTESLRKYGPNCYDAIRAAFDQIDKLLKTGNGRQQLKKKFKLCF 204 (434)
T ss_dssp -CCTTTHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHCCTCHHHHHHHHHCTBSS
T ss_pred -ecccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhhcccHHHHHHHHhhhcc
Confidence 567999999999998877778999999999999999999999999999999995
No 3
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=4.5e-53 Score=403.91 Aligned_cols=213 Identities=36% Similarity=0.627 Sum_probs=191.0
Q ss_pred cCcceeeEEEeecCCCCCCCCCeEEEEEEEeccccCCCCCCccEEEEeCCCCCch--hhhhhcchHHHHHHHhCCEEEee
Q 023020 65 QYRYETRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIE--WFAVNSGFVWDIAPRFGAMLVFP 142 (288)
Q Consensus 65 ~~~~~~~~f~Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~--~~~~~~~~~~~lA~~~g~~Vi~l 142 (288)
.+..++.||+|++|||+.. ++.|.||||++..+|.. +++||||++||||++. |.....+.+..+|+++|+.|+.+
T Consensus 48 ~~~~~~~~~~Q~lDhF~~~-~~~~~Qq~~y~n~~~~~--~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~l 124 (514)
T KOG2182|consen 48 PANVEQSTFTQKLDHFDSS-NGKFFQQRFYNNNQWAK--PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQL 124 (514)
T ss_pred cccccccchhhhhhhhhcc-hhhhhhhheeecccccc--CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEe
Confidence 4567899999999999554 56666666666667754 3599999999999987 33344457889999999999999
Q ss_pred eccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCC-CEEEeecChhHHHHHHHHHhcccccce
Q 023020 143 EHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEAS-PVVLFGGSYGGMLAAWMRLKYPHIAIG 221 (288)
Q Consensus 143 EhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~-~~il~G~SyGG~lAa~~~~kyP~~v~g 221 (288)
||||||+|.|.+++ +++||+|||++|||+|+++||+.++.+++..+. |||.||+||.|+||||+|++|||++.|
T Consensus 125 EHRFYG~S~P~~~~-----st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~G 199 (514)
T KOG2182|consen 125 EHRFYGQSSPIGDL-----STSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVG 199 (514)
T ss_pred eeeccccCCCCCCC-----cccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhhee
Confidence 99999999999998 889999999999999999999999998876554 999999999999999999999999999
Q ss_pred eEEecCccccccCCCChhhHHHHHHHHhhhcCcchHHHHHHHHHHHHHHhcCcccHHHHHHhcCCCC
Q 023020 222 ALASSAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELVSVGQKENGLLELTKTFHLCR 288 (288)
Q Consensus 222 ~vasSapv~~~~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~f~~C~ 288 (288)
+|+|||||.+ .+||++|.++|+++++..+.+|.++|+++|..|+.++.+.+|++.|++.|++|+
T Consensus 200 svASSapv~A---~~DF~EY~~VVe~s~~~~~~~C~~ai~~~f~~~~~l~~t~~gr~~Lk~~Fnl~~ 263 (514)
T KOG2182|consen 200 SVASSAPVLA---KVDFYEYLMVVEESLRRYSPECADAIKEGFKSMEELLLTKGGRQALKSLFNLCP 263 (514)
T ss_pred ecccccceeE---EecHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccCC
Confidence 9999999996 567999999999999999999999999999999999999999999999999996
No 4
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=99.90 E-value=2.8e-23 Score=196.12 Aligned_cols=171 Identities=26% Similarity=0.300 Sum_probs=139.2
Q ss_pred ceeeEEEeecCCCCCCCCCeEEEEEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecccc
Q 023020 68 YETRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYY 147 (288)
Q Consensus 68 ~~~~~f~Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgy 147 (288)
+...+|+||+||.+|+ .+||+||..+.++-. ..|.||++.|-+-... . ...++.+-++++.+.+|||||
T Consensus 31 ffvl~y~QPvDH~~P~-~gtF~QRvtLlHk~~-----drPtV~~T~GY~~~~~----p-~r~Ept~Lld~NQl~vEhRfF 99 (448)
T PF05576_consen 31 FFVLRYTQPVDHRHPE-KGTFQQRVTLLHKDF-----DRPTVLYTEGYNVSTS----P-RRSEPTQLLDGNQLSVEHRFF 99 (448)
T ss_pred EEEEeeecCCCCCCCC-CCceEEEEEEEEcCC-----CCCeEEEecCcccccC----c-cccchhHhhccceEEEEEeec
Confidence 4467899999999998 899999999987643 3799999887653321 1 134788888999999999999
Q ss_pred ccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 148 GESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 148 G~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
|.|.|.+ .++++||++|+.+|.+.+++.+|.-|. .+||-.|+|-||+.|+.+|..||+.|++.|+.+|
T Consensus 100 ~~SrP~p---------~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 100 GPSRPEP---------ADWSYLTIWQAASDQHRIVQAFKPIYP---GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred cCCCCCC---------CCcccccHhHhhHHHHHHHHHHHhhcc---CCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 9999955 378999999999999999999998773 5899999999999999999999999999999999
Q ss_pred ccccc--cCCCChhhHHHHHHHHhhhcCcchHHHHHHHHHHHH
Q 023020 228 PILQF--EDIVPPETFYNIVSSDFKRESASCFNTIKESWGELV 268 (288)
Q Consensus 228 pv~~~--~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~ 268 (288)
|.... ++ ..+..|++.|. .++|.+.|++.-+++-
T Consensus 168 P~~~~~~eD-~~y~~Fl~~VG------t~eCR~~l~~~Qre~L 203 (448)
T PF05576_consen 168 PNDVVNRED-SRYDRFLEKVG------TAECRDKLNDFQREAL 203 (448)
T ss_pred ccccCcccc-hhHHHHHHhcC------CHHHHHHHHHHHHHHH
Confidence 98632 11 12445665443 5789999988766654
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.62 E-value=6.7e-15 Score=138.68 Aligned_cols=109 Identities=23% Similarity=0.285 Sum_probs=83.1
Q ss_pred CCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCc-cCHHHHHHHHHHHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY-LTAEQALADFAVFI 182 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~y-lt~~qal~Dl~~fi 182 (288)
++++|+|+||..+....++. .+...|++ .|+.|+++|+||||+|.... .+ .+.++.++|+..++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~--~~~~~l~~-~g~~v~~~D~~G~G~S~~~~------------~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFE--GIARKIAS-SGYGVFAMDYPGFGLSEGLH------------GYIPSFDDLVDDVIEHY 150 (349)
T ss_pred CCeEEEEECCCCCccchHHH--HHHHHHHh-CCCEEEEecCCCCCCCCCCC------------CCcCCHHHHHHHHHHHH
Confidence 34678999997665443322 23445554 48999999999999996311 12 36788999999999
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
+.++.+...+..|++++||||||++|+.++.++|+.+.|+|+.++
T Consensus 151 ~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p 195 (349)
T PLN02385 151 SKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAP 195 (349)
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecc
Confidence 988754333345899999999999999999999999999999764
No 6
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.61 E-value=8.8e-15 Score=136.38 Aligned_cols=111 Identities=22% Similarity=0.260 Sum_probs=82.9
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
++.|||+||..++..+.+ ..+...|++ .|+.|+++|+||||+|..... ...+.++.+.|+..+++.
T Consensus 59 ~~~VvllHG~~~~~~~~~--~~~~~~L~~-~Gy~V~~~D~rGhG~S~~~~~-----------~~~~~~~~~~D~~~~i~~ 124 (330)
T PLN02298 59 RALIFMVHGYGNDISWTF--QSTAIFLAQ-MGFACFALDLEGHGRSEGLRA-----------YVPNVDLVVEDCLSFFNS 124 (330)
T ss_pred ceEEEEEcCCCCCcceeh--hHHHHHHHh-CCCEEEEecCCCCCCCCCccc-----------cCCCHHHHHHHHHHHHHH
Confidence 345899999864443222 122334553 589999999999999953111 123678899999999999
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
++......+.|++++||||||++|+.++.++|+.|.++|+.+++.
T Consensus 125 l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 125 VKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 986433334589999999999999999999999999999977654
No 7
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.60 E-value=1.4e-14 Score=132.69 Aligned_cols=141 Identities=21% Similarity=0.283 Sum_probs=101.0
Q ss_pred eecCCCCCCCCCeEEEEEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCC
Q 023020 75 QRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYG 154 (288)
Q Consensus 75 Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~ 154 (288)
+...+|.+.++...--++|... + ++.+.+-|+++||..+..++.. ..+...+++ .|+.|+++||+|||.|.-
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~--~-~~~pr~lv~~~HG~g~~~s~~~--~~~a~~l~~-~g~~v~a~D~~GhG~SdG-- 98 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPL--S-GTEPRGLVFLCHGYGEHSSWRY--QSTAKRLAK-SGFAVYAIDYEGHGRSDG-- 98 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccC--C-CCCCceEEEEEcCCcccchhhH--HHHHHHHHh-CCCeEEEeeccCCCcCCC--
Confidence 3344455444534444444332 1 1134577999999776554432 133445554 599999999999999962
Q ss_pred CccccccccccCCcc-CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccccc
Q 023020 155 STEVAYQNATTLSYL-TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE 233 (288)
Q Consensus 155 ~~~~~~~~~~~l~yl-t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~~~ 233 (288)
- -.|. +++..++|+..|.+.++.+-..++.|.+++||||||++++.+..+.|+..+|+|+ +||++.+.
T Consensus 99 l----------~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~il-vaPmc~i~ 167 (313)
T KOG1455|consen 99 L----------HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAIL-VAPMCKIS 167 (313)
T ss_pred C----------cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCccccccee-eecccccC
Confidence 1 1355 4889999999999998876555678999999999999999999999999999999 67887643
Q ss_pred C
Q 023020 234 D 234 (288)
Q Consensus 234 ~ 234 (288)
+
T Consensus 168 ~ 168 (313)
T KOG1455|consen 168 E 168 (313)
T ss_pred C
Confidence 3
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.56 E-value=4.4e-14 Score=131.40 Aligned_cols=108 Identities=23% Similarity=0.299 Sum_probs=81.4
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
+.|+++||.......|. .++..++. .|+.|+++||||||.|.. +.. ...-+.++.+.|+..|++.+
T Consensus 35 g~Vvl~HG~~Eh~~ry~---~la~~l~~-~G~~V~~~D~RGhG~S~r-~~r---------g~~~~f~~~~~dl~~~~~~~ 100 (298)
T COG2267 35 GVVVLVHGLGEHSGRYE---ELADDLAA-RGFDVYALDLRGHGRSPR-GQR---------GHVDSFADYVDDLDAFVETI 100 (298)
T ss_pred cEEEEecCchHHHHHHH---HHHHHHHh-CCCEEEEecCCCCCCCCC-CCc---------CCchhHHHHHHHHHHHHHHH
Confidence 78999999754333221 12333333 499999999999999963 111 01124889999999999998
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
... ....|++++||||||.||+.+...+|+.|+|+|++|+-+
T Consensus 101 ~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 101 AEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred hcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccc
Confidence 764 236799999999999999999999999999999965443
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=99.56 E-value=4.3e-14 Score=132.47 Aligned_cols=113 Identities=14% Similarity=0.101 Sum_probs=82.3
Q ss_pred CCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
++++|+|+||..+....|. .+...++ +.|+.|+++|+||||.|.+..+ ........+.++.++|+..+++
T Consensus 53 ~~~~vll~HG~~~~~~~y~---~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~~~~~~d~~~~~~ 122 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYA---ELAYDLF-HLGYDVLIIDHRGQGRSGRLLD------DPHRGHVERFNDYVDDLAAFWQ 122 (330)
T ss_pred CCcEEEEECCccchHHHHH---HHHHHHH-HCCCeEEEEcCCCCCCCCCCCC------CCCcCccccHHHHHHHHHHHHH
Confidence 4467899999765443322 2233344 3599999999999999964211 0111112378999999999999
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
.+.... +..|++++||||||.+|+.++.++|+.+.++|+++++
T Consensus 123 ~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 123 QEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 875442 2468999999999999999999999999999987654
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.55 E-value=3.3e-14 Score=129.04 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=79.4
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.||||+||..++...|. .++..+++ ++.|+++|+||||+|... . ...+.+...+|+..|++.+
T Consensus 26 ~plvllHG~~~~~~~w~---~~~~~L~~--~~~vi~~Dl~G~G~S~~~-~-----------~~~~~~~~~~~~~~~i~~l 88 (276)
T TIGR02240 26 TPLLIFNGIGANLELVF---PFIEALDP--DLEVIAFDVPGVGGSSTP-R-----------HPYRFPGLAKLAARMLDYL 88 (276)
T ss_pred CcEEEEeCCCcchHHHH---HHHHHhcc--CceEEEECCCCCCCCCCC-C-----------CcCcHHHHHHHHHHHHHHh
Confidence 58999999776655331 23344443 689999999999999631 1 1247888889999999887
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.. .+++++||||||++|+.++.++|+.|.++|+.+++.
T Consensus 89 ~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 89 DY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred Cc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 42 489999999999999999999999999999877554
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.54 E-value=5.8e-14 Score=128.43 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=83.6
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||..++...|. ..+..+++ .+.|+++|+||||.|.+.... ..+.-...++++...|+..+++.
T Consensus 29 ~~~vlllHG~~~~~~~w~---~~~~~L~~--~~~vi~~DlpG~G~S~~~~~~-----~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 29 GPALVLVHGFGGNADHWR---KNTPVLAK--SHRVYAIDLLGYGYSDKPNPR-----SAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred CCeEEEECCCCCChhHHH---HHHHHHHh--CCeEEEEcCCCCCCCCCCccc-----cccccccCCHHHHHHHHHHHHHH
Confidence 368999999887665432 23456665 369999999999999742210 00111356899999999999997
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+.. .+++++||||||++|+.++.++|+.|.++|+.+++.
T Consensus 99 l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 99 VVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred hcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 752 489999999999999999999999999999876544
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.53 E-value=1.2e-13 Score=127.07 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=78.8
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||..++...|. .++..|++ .|+.|+++|+||||+|.+... ....+.++.++|++.++++
T Consensus 46 ~~~lvliHG~~~~~~~w~---~~~~~L~~-~gy~vi~~Dl~G~G~S~~~~~----------~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 46 GPPVLLLHGEPSWSYLYR---KMIPILAA-AGHRVIAPDLIGFGRSDKPTR----------REDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred CCEEEEECCCCCchhhHH---HHHHHHHh-CCCEEEEECCCCCCCCCCCCC----------cccCCHHHHHHHHHHHHHH
Confidence 457999999765444321 23344543 389999999999999964221 1235788899999999887
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
+. ..+++++||||||.+|..++.+||+.|.++++.++
T Consensus 112 l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 112 LD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred cC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 53 24899999999999999999999999999998764
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.52 E-value=2.4e-13 Score=122.89 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=79.5
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
++.|||+||..++...|. .+...+++ .|+.|+++|+||||.|.+... ..-+..+.+.|+..++..
T Consensus 25 ~~~v~llHG~~~~~~~~~---~~~~~l~~-~g~~via~D~~G~G~S~~~~~-----------~~~~~~~~~~d~~~~l~~ 89 (276)
T PHA02857 25 KALVFISHGAGEHSGRYE---ELAENISS-LGILVFSHDHIGHGRSNGEKM-----------MIDDFGVYVRDVVQHVVT 89 (276)
T ss_pred CEEEEEeCCCccccchHH---HHHHHHHh-CCCEEEEccCCCCCCCCCccC-----------CcCCHHHHHHHHHHHHHH
Confidence 334555599765544332 23444554 489999999999999964211 122556778888888887
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
++..+ +..|++++||||||++|+.++.++|+.++++|+.++++.
T Consensus 90 ~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 90 IKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred HHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 76543 246899999999999999999999999999999876543
No 14
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.51 E-value=1.3e-13 Score=122.15 Aligned_cols=105 Identities=21% Similarity=0.211 Sum_probs=80.6
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||||+||+.++...++. .+..+.++.|+.|+.+|+||||.|..... .-++.+.++.++|+..+++.
T Consensus 25 ~~~vl~~hG~~g~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLE---NLRELLKEEGREVIMYDQLGCGYSDQPDD---------SDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CCeEEEEcCCCCccHHHHH---HHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------ccccccHHHHHHHHHHHHHH
Confidence 4689999998766543332 23455555589999999999999964221 11246889999999888876
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
+. ..+++++||||||.++.+++.++|+.+.++++.++
T Consensus 93 ~~------~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 93 LG------LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred cC------CCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 53 24699999999999999999999999999998654
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.51 E-value=1.3e-13 Score=117.17 Aligned_cols=102 Identities=25% Similarity=0.306 Sum_probs=81.3
Q ss_pred EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHH
Q 023020 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ 187 (288)
Q Consensus 108 I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~ 187 (288)
|||+||..++...|. .+...++ .|+.|+++|.||||.|.+..+ ....+.++.++|+.++++.+..
T Consensus 1 vv~~hG~~~~~~~~~---~~~~~l~--~~~~v~~~d~~G~G~s~~~~~----------~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD---PLAEALA--RGYRVIAFDLPGHGRSDPPPD----------YSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGGH---HHHHHHH--TTSEEEEEECTTSTTSSSHSS----------GSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHHH---HHHHHHh--CCCEEEEEecCCccccccccc----------cCCcchhhhhhhhhhccccccc
Confidence 789999988775442 3455564 499999999999999974221 1346789999999999987643
Q ss_pred hcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 188 NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 188 ~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
.|++++|||+||.+++.++.++|+.|.++|+.+++..
T Consensus 66 ------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 ------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp ------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ------ccccccccccccccccccccccccccccceeeccccc
Confidence 5899999999999999999999999999999776663
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.50 E-value=1.7e-13 Score=121.69 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=80.1
Q ss_pred CCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.+.||||+||..++...+. .+...+++ ++.|+++|.||||.|.+.. .++.++.++|+.++++
T Consensus 15 ~~~~iv~lhG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~s~~~~-------------~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLG---VLARDLVN--DHDIIQVDMRNHGLSPRDP-------------VMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCCEEEECCCCCchhHHH---HHHHHHhh--CCeEEEECCCCCCCCCCCC-------------CCCHHHHHHHHHHHHH
Confidence 3568999999887665432 23445554 6899999999999997422 2578899999999998
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec-Ccc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS-API 229 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS-apv 229 (288)
.+. ..+++++||||||++|+.++.++|+.|.++++.+ +|.
T Consensus 77 ~l~------~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~ 117 (255)
T PRK10673 77 ALQ------IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPV 117 (255)
T ss_pred HcC------CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCC
Confidence 763 2479999999999999999999999999998763 443
No 17
>PLN02965 Probable pheophorbidase
Probab=99.49 E-value=1.3e-13 Score=123.95 Aligned_cols=103 Identities=15% Similarity=0.078 Sum_probs=78.6
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
..|+|+||...+...| ...+..|++ .++.|+++|+||||+|..... ...+.++..+|+..+++.+
T Consensus 4 ~~vvllHG~~~~~~~w---~~~~~~L~~-~~~~via~Dl~G~G~S~~~~~-----------~~~~~~~~a~dl~~~l~~l 68 (255)
T PLN02965 4 IHFVFVHGASHGAWCW---YKLATLLDA-AGFKSTCVDLTGAGISLTDSN-----------TVSSSDQYNRPLFALLSDL 68 (255)
T ss_pred eEEEEECCCCCCcCcH---HHHHHHHhh-CCceEEEecCCcCCCCCCCcc-----------ccCCHHHHHHHHHHHHHhc
Confidence 5699999987655432 123445543 379999999999999952111 1357889999999999875
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
.. ..+++++||||||+++..++.++|+.|.++|+.++.
T Consensus 69 ~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 69 PP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred CC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 31 148999999999999999999999999999976543
No 18
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.49 E-value=1.5e-13 Score=125.74 Aligned_cols=102 Identities=19% Similarity=0.148 Sum_probs=81.3
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||..++...|. .++..|++. +.|+++|+||||.|.+... ..+.+..++|+..+++.
T Consensus 27 g~~vvllHG~~~~~~~w~---~~~~~L~~~--~~via~D~~G~G~S~~~~~------------~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWR---NIIPHLAGL--GRCLAPDLIGMGASDKPDI------------DYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEECCCCCCHHHHH---HHHHHHhhC--CEEEEEcCCCCCCCCCCCC------------CCCHHHHHHHHHHHHHH
Confidence 468999999876665332 345566664 4999999999999964221 24788889999999988
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+.. .+++++|||+||.+|+.++.+||+.|.++|+.+++.
T Consensus 90 l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 90 LGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred hCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 642 589999999999999999999999999999877644
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.47 E-value=2.6e-13 Score=122.41 Aligned_cols=106 Identities=12% Similarity=0.076 Sum_probs=73.6
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||||+||..++...+......+..+++ .|+.|+++|+||||.|.+.... . ..+. ....|+.++++.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~-------~---~~~~-~~~~~l~~~l~~ 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMD-------E---QRGL-VNARAVKGLMDA 97 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCc-------c---cccc-hhHHHHHHHHHH
Confidence 46899999976655432111111233443 4899999999999999743210 0 0111 235777788776
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+. ..+++++||||||+++..++.+||+.|.++|+.+++
T Consensus 98 l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 98 LD------IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred cC------CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 53 248999999999999999999999999999987643
No 20
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.45 E-value=7.1e-13 Score=124.76 Aligned_cols=117 Identities=18% Similarity=0.204 Sum_probs=81.3
Q ss_pred CCCccEEEEeCCCCCch-hhhh---------------------h-cchHHHHHHHhCCEEEeeeccccccCCCCCCcccc
Q 023020 103 NRLGPIFLYCGNEGDIE-WFAV---------------------N-SGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVA 159 (288)
Q Consensus 103 ~~~~pI~l~~Ggeg~~~-~~~~---------------------~-~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~ 159 (288)
++++.|+++||-.+... .+.. . ..+...|++ .|+.|+++||||||+|.....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~-~G~~V~~~D~rGHG~S~~~~~---- 93 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK-NGYSVYGLDLQGHGESDGLQN---- 93 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH-CCCcEEEecccccCCCccccc----
Confidence 35688999999655443 1111 0 122334443 499999999999999963211
Q ss_pred ccccccCCc-cCHHHHHHHHHHHHHHHHHhc-----------------CCC-CCCEEEeecChhHHHHHHHHHhccc---
Q 023020 160 YQNATTLSY-LTAEQALADFAVFITNLKQNL-----------------SAE-ASPVVLFGGSYGGMLAAWMRLKYPH--- 217 (288)
Q Consensus 160 ~~~~~~l~y-lt~~qal~Dl~~fi~~l~~~~-----------------~~~-~~~~il~G~SyGG~lAa~~~~kyP~--- 217 (288)
...+ -+.++.++|+..+++.++.+. ..+ +.|++++||||||++++.+..++++
T Consensus 94 -----~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~ 168 (332)
T TIGR01607 94 -----LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNE 168 (332)
T ss_pred -----cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccc
Confidence 1122 368999999999999886520 112 5699999999999999999887764
Q ss_pred -----ccceeEEecCcc
Q 023020 218 -----IAIGALASSAPI 229 (288)
Q Consensus 218 -----~v~g~vasSapv 229 (288)
.+.|+|++|+++
T Consensus 169 ~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 169 NNDKLNIKGCISLSGMI 185 (332)
T ss_pred cccccccceEEEeccce
Confidence 588998877664
No 21
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.43 E-value=4.2e-13 Score=124.19 Aligned_cols=104 Identities=21% Similarity=0.212 Sum_probs=77.1
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||+.++.... .....+ ...++.|+++|+||||+|.+.... .-.+.++..+|+..++++
T Consensus 27 ~~~lvllHG~~~~~~~~----~~~~~~-~~~~~~vi~~D~~G~G~S~~~~~~----------~~~~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP----GCRRFF-DPETYRIVLFDQRGCGKSTPHACL----------EENTTWDLVADIEKLREK 91 (306)
T ss_pred CCEEEEECCCCCCCCCH----HHHhcc-CccCCEEEEECCCCCCCCCCCCCc----------ccCCHHHHHHHHHHHHHH
Confidence 46899999987754321 111112 224789999999999999743211 123677888999888876
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
++ ..+++++||||||++++.++.+||+.|.++|+.++.+
T Consensus 92 l~------~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 92 LG------IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred cC------CCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 53 2479999999999999999999999999999876543
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.42 E-value=9.9e-13 Score=117.46 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=79.1
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.+|+|+||..++...|. .+...+++ ++.|+++|+||||.|.+... ...+.+..++|+..+++.
T Consensus 28 ~~~vv~~hG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSWR---DLMPPLAR--SFRVVAPDLPGHGFTRAPFR-----------FRFTLPSMAEDLSALCAA 91 (278)
T ss_pred CCeEEEEcCCCCCHHHHH---HHHHHHhh--CcEEEeecCCCCCCCCCccc-----------cCCCHHHHHHHHHHHHHH
Confidence 357899999877655432 33455654 68999999999999964221 124788899999998876
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+. ..+++++||||||++++.++.++|+.+.++++.+++.
T Consensus 92 ~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 92 EG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred cC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 43 2478999999999999999999999999988766543
No 23
>PRK06489 hypothetical protein; Provisional
Probab=99.42 E-value=3e-12 Score=121.36 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=74.6
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHH------HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAP------RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADF 178 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~------~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl 178 (288)
+.||||+||+.++...+.. ..+...+.. ..++.||++|+||||+|....+. ...+....++++.++|+
T Consensus 69 gpplvllHG~~~~~~~~~~-~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~-----~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLS-PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG-----LRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCCchhhhcc-chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC-----CCCCCCcccHHHHHHHH
Confidence 3579999998876543321 122222210 13689999999999999632110 00111235778888887
Q ss_pred HHHH-HHHHHhcCCCCCCE-EEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 179 AVFI-TNLKQNLSAEASPV-VLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 179 ~~fi-~~l~~~~~~~~~~~-il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
..++ +.+.. .++ +++||||||++|+.++.+||+.|.++|+.++
T Consensus 143 ~~~l~~~lgi------~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 143 YRLVTEGLGV------KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HHHHHHhcCC------CceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 7754 44321 366 5899999999999999999999999997643
No 24
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.42 E-value=1.1e-12 Score=115.69 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=75.8
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.||+|+||..++...|. ..+..+ + ++.|+++|+||||.|.+... .+.++..+|+..+++.+
T Consensus 3 p~vvllHG~~~~~~~w~---~~~~~l-~--~~~vi~~D~~G~G~S~~~~~-------------~~~~~~~~~l~~~l~~~ 63 (242)
T PRK11126 3 PWLVFLHGLLGSGQDWQ---PVGEAL-P--DYPRLYIDLPGHGGSAAISV-------------DGFADVSRLLSQTLQSY 63 (242)
T ss_pred CEEEEECCCCCChHHHH---HHHHHc-C--CCCEEEecCCCCCCCCCccc-------------cCHHHHHHHHHHHHHHc
Confidence 46999999887665332 223333 2 68999999999999964211 26788899999998865
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccc-cceeEEecCcc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI-AIGALASSAPI 229 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~-v~g~vasSapv 229 (288)
. ..+++++||||||.+|+.++.+||+. |.++++.+++.
T Consensus 64 ~------~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 64 N------ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred C------CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 3 35899999999999999999999765 99998866543
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.41 E-value=1.1e-12 Score=117.30 Aligned_cols=93 Identities=16% Similarity=0.211 Sum_probs=68.8
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
||+|+||..++...|. .....|.+ ++.|+++|+||||.|.... ..+.++.+.|+.++
T Consensus 15 ~ivllHG~~~~~~~w~---~~~~~L~~--~~~vi~~Dl~G~G~S~~~~-------------~~~~~~~~~~l~~~----- 71 (256)
T PRK10349 15 HLVLLHGWGLNAEVWR---CIDEELSS--HFTLHLVDLPGFGRSRGFG-------------ALSLADMAEAVLQQ----- 71 (256)
T ss_pred eEEEECCCCCChhHHH---HHHHHHhc--CCEEEEecCCCCCCCCCCC-------------CCCHHHHHHHHHhc-----
Confidence 4999999776655331 23445544 5899999999999996311 24666666665431
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
. ..+++++||||||.+|..++.++|+.|.++|+.++
T Consensus 72 ---~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 72 ---A--PDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred ---C--CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 1 25899999999999999999999999999987643
No 26
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.41 E-value=1.1e-12 Score=114.68 Aligned_cols=100 Identities=18% Similarity=0.218 Sum_probs=77.0
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.+|||+||..++...+. ..+..+.+ ++.|+++|+||||.|..... ...+.++.+.|+..+++.+
T Consensus 14 ~~iv~lhG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~~-----------~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 14 PVVVLSSGLGGSGSYWA---PQLDVLTQ--RFHVVTYDHRGTGRSPGELP-----------PGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEEcCCCcchhHHH---HHHHHHHh--ccEEEEEcCCCCCCCCCCCc-----------ccCCHHHHHHHHHHHHHHh
Confidence 46888999877654332 22333433 79999999999999963211 1257899999999999876
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
+ ..+++++||||||++|..++.++|+.|.++|+.++
T Consensus 78 ~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 78 N------IERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred C------CCcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 4 24799999999999999999999999999997654
No 27
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.40 E-value=1.9e-12 Score=118.41 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=76.9
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.+|+|+||..++...| ..+...|++ .|+.|+++|+||||+|.+... ...+.++.++|+..+++.+
T Consensus 19 p~vvliHG~~~~~~~w---~~~~~~L~~-~g~~vi~~dl~g~G~s~~~~~-----------~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 19 PHFVLIHGISGGSWCW---YKIRCLMEN-SGYKVTCIDLKSAGIDQSDAD-----------SVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred CeEEEECCCCCCcCcH---HHHHHHHHh-CCCEEEEecccCCCCCCCCcc-----------cCCCHHHHHHHHHHHHHhc
Confidence 4699999977655432 122333443 489999999999999853221 2357888888888888764
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
.. ..+++++||||||+++..++.++|+.|.++|..++.
T Consensus 84 ~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 84 PE-----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CC-----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 21 258999999999999999999999999999987553
No 28
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.40 E-value=2.2e-12 Score=118.47 Aligned_cols=103 Identities=15% Similarity=0.149 Sum_probs=75.4
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||||+||.......| ..++..+++ ++.|+++|+||||.|....+. ..+.++..+|+..+++.
T Consensus 34 ~~~iv~lHG~~~~~~~~---~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~-----------~~~~~~~~~~~~~~~~~ 97 (286)
T PRK03204 34 GPPILLCHGNPTWSFLY---RDIIVALRD--RFRCVAPDYLGFGLSERPSGF-----------GYQIDEHARVIGEFVDH 97 (286)
T ss_pred CCEEEEECCCCccHHHH---HHHHHHHhC--CcEEEEECCCCCCCCCCCCcc-----------ccCHHHHHHHHHHHHHH
Confidence 46899999976433222 122333443 689999999999999632210 23677778888888776
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+. ..+++++||||||++|..++.++|+.|.++|+.+++.
T Consensus 98 ~~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 98 LG------LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred hC------CCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 42 2579999999999999999999999999999866543
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.39 E-value=1.3e-12 Score=113.09 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=74.8
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
+|||+||..++...+ ..+...++ .|+.|+++|+||||.|.+.. ...+.++.++|+..+++.+.
T Consensus 15 ~li~~hg~~~~~~~~---~~~~~~l~--~~~~v~~~d~~G~G~s~~~~------------~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 15 VLVFINSLGTDLRMW---DPVLPALT--PDFRVLRYDKRGHGLSDAPE------------GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred eEEEEcCcccchhhH---HHHHHHhh--cccEEEEecCCCCCCCCCCC------------CCCCHHHHHHHHHHHHHHhC
Confidence 467778765444322 12333443 38999999999999995321 13478889999999988763
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
..+++++|||+||++++.++.++|+.|.++++.+++.
T Consensus 78 ------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 78 ------IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred ------CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 2479999999999999999999999999999876543
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.38 E-value=1.1e-12 Score=123.55 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=74.6
Q ss_pred CccEEEEeCCCCCchhhhh-----hcchHHHHHH------HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAV-----NSGFVWDIAP------RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQ 173 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~-----~~~~~~~lA~------~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~q 173 (288)
+.|+||+|||.++...+.. ..++|..+.. .-++.||++|+||||.|.+. ..+.+.
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--------------~~~~~~ 122 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--------------PIDTAD 122 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--------------CCCHHH
Confidence 4689999988776542000 0012322221 12689999999999988431 135677
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 174 ALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 174 al~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
.++|+..+++.+.. +.+++++||||||++|..++.+||+.|.++|+.++
T Consensus 123 ~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s 171 (343)
T PRK08775 123 QADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSG 171 (343)
T ss_pred HHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEECc
Confidence 89999999987642 12458999999999999999999999999998754
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.38 E-value=2.4e-12 Score=110.91 Aligned_cols=102 Identities=21% Similarity=0.239 Sum_probs=75.5
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHH-HHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALAD-FAVFITN 184 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~D-l~~fi~~ 184 (288)
.+|+++||..++...+. .+...|+ .|+.|+.+|+||||.|..... ....+.++.+.| +..+++.
T Consensus 2 ~~vv~~hG~~~~~~~~~---~~~~~L~--~~~~v~~~d~~g~G~s~~~~~----------~~~~~~~~~~~~~~~~~~~~ 66 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQ---ALIELLG--PHFRCLAIDLPGHGSSQSPDE----------IERYDFEEAAQDILATLLDQ 66 (251)
T ss_pred CEEEEEcCCCCchhhHH---HHHHHhc--ccCeEEEEcCCCCCCCCCCCc----------cChhhHHHHHHHHHHHHHHH
Confidence 57999999876655432 2344454 389999999999999953211 123567778877 5566554
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+. ..+++++|||+||.+|+.++.++|+.|.++++.+++
T Consensus 67 ~~------~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 67 LG------IEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred cC------CCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 32 358999999999999999999999999999886543
No 32
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.37 E-value=2.7e-12 Score=121.94 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=77.4
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.||+|+||..++...|. ..+..+++ ++.|+++|+||||+|.+..+ ...+.++..+|+..+++.+
T Consensus 89 p~lvllHG~~~~~~~w~---~~~~~L~~--~~~via~Dl~G~G~S~~~~~-----------~~~~~~~~a~~l~~~l~~l 152 (360)
T PLN02679 89 PPVLLVHGFGASIPHWR---RNIGVLAK--NYTVYAIDLLGFGASDKPPG-----------FSYTMETWAELILDFLEEV 152 (360)
T ss_pred CeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCCCC-----------ccccHHHHHHHHHHHHHHh
Confidence 57999999876655332 23444554 78999999999999964221 1247888889999998875
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHH-hcccccceeEEecCc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRL-KYPHIAIGALASSAP 228 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~-kyP~~v~g~vasSap 228 (288)
.. .+++++||||||.++..++. .+|+.|.++|+.+++
T Consensus 153 ~~------~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 153 VQ------KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred cC------CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 42 48999999999999988876 589999999987654
No 33
>PLN02578 hydrolase
Probab=99.36 E-value=3.6e-12 Score=120.66 Aligned_cols=99 Identities=21% Similarity=0.163 Sum_probs=76.9
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||..++...|. .....+++ ++.|+++|+||||.|.... ..++.+...+|+..|++.
T Consensus 86 g~~vvliHG~~~~~~~w~---~~~~~l~~--~~~v~~~D~~G~G~S~~~~------------~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWR---YNIPELAK--KYKVYALDLLGFGWSDKAL------------IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CCeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCcc------------cccCHHHHHHHHHHHHHH
Confidence 468999999776543321 22445654 6899999999999996311 124677788899999887
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
+.. .+++++||||||.+|..++.++|+.|.++++.+
T Consensus 149 ~~~------~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~ 184 (354)
T PLN02578 149 VVK------EPAVLVGNSLGGFTALSTAVGYPELVAGVALLN 184 (354)
T ss_pred hcc------CCeEEEEECHHHHHHHHHHHhChHhcceEEEEC
Confidence 642 589999999999999999999999999998754
No 34
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.36 E-value=4e-12 Score=125.31 Aligned_cols=107 Identities=14% Similarity=0.129 Sum_probs=79.7
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHH--HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHH-HH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAP--RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFA-VF 181 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~--~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~-~f 181 (288)
+.||||+||..++...|.. ..+..+++ +.++.|+++|+||||+|....+ ...+.++.++|+. .+
T Consensus 201 k~~VVLlHG~~~s~~~W~~--~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-----------~~ytl~~~a~~l~~~l 267 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTE--TLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-----------SLYTLREHLEMIERSV 267 (481)
T ss_pred CCeEEEECCCCccHHHHHH--HHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-----------CcCCHHHHHHHHHHHH
Confidence 3689999999877654321 11233442 2489999999999999963221 2357888888884 67
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
++.+. ..+++++||||||++|..++.+||+.|.++|+.++|..
T Consensus 268 l~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 268 LERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 66543 35899999999999999999999999999999876643
No 35
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.35 E-value=1.1e-11 Score=119.56 Aligned_cols=106 Identities=19% Similarity=0.277 Sum_probs=79.0
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCc-cCHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY-LTAEQALADFAVFIT 183 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~y-lt~~qal~Dl~~fi~ 183 (288)
.++|+|+||..++...+ ..+...+++ .|+.|+++|+||||+|.... .| .+.++.++|+..+++
T Consensus 136 ~~~Vl~lHG~~~~~~~~---~~~a~~L~~-~Gy~V~~~D~rGhG~S~~~~------------~~~~~~~~~~~Dl~~~l~ 199 (395)
T PLN02652 136 RGILIIIHGLNEHSGRY---LHFAKQLTS-CGFGVYAMDWIGHGGSDGLH------------GYVPSLDYVVEDTEAFLE 199 (395)
T ss_pred ceEEEEECCchHHHHHH---HHHHHHHHH-CCCEEEEeCCCCCCCCCCCC------------CCCcCHHHHHHHHHHHHH
Confidence 45788999976544322 123445553 49999999999999996321 12 257889999999999
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc---ccceeEEecCcc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH---IAIGALASSAPI 229 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~---~v~g~vasSapv 229 (288)
.+..+. +..|++++||||||.+++.++ .+|+ .+.++|+.|+.+
T Consensus 200 ~l~~~~--~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 200 KIRSEN--PGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHhC--CCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECccc
Confidence 998654 245899999999999999876 4675 799999977554
No 36
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.35 E-value=1.8e-11 Score=112.29 Aligned_cols=109 Identities=14% Similarity=-0.018 Sum_probs=78.1
Q ss_pred CccEEEEeCCCCCchhhh-hhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFA-VNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~-~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.++|+|+||..+....+. ....+...|+ +.|+.|+.+|+||||+|..... ..+.++.++|+...++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La-~~Gy~Vl~~Dl~G~G~S~g~~~------------~~~~~~~~~Dv~~ai~ 91 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFA-AGGFGVLQIDLYGCGDSAGDFA------------AARWDVWKEDVAAAYR 91 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCccc------------cCCHHHHHHHHHHHHH
Confidence 356888998654332211 0011123344 3589999999999999953111 1356788899999888
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.++.. . ..|++++||||||.+++.++.++|+.+.++|+.++++
T Consensus 92 ~L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 92 WLIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 88753 2 3589999999999999999999999999999876444
No 37
>PLN02511 hydrolase
Probab=99.35 E-value=6.1e-12 Score=120.92 Aligned_cols=108 Identities=14% Similarity=0.096 Sum_probs=79.5
Q ss_pred ccEEEEeCCCCCchh-hhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEW-FAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~-~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
.+|+|+||.+|+... |.. .+... +.+.|+.|+++|+||||.|..... ++. .....+|+..++++
T Consensus 101 p~vvllHG~~g~s~~~y~~--~~~~~-~~~~g~~vv~~d~rG~G~s~~~~~-----------~~~-~~~~~~Dl~~~i~~ 165 (388)
T PLN02511 101 PVLILLPGLTGGSDDSYVR--HMLLR-ARSKGWRVVVFNSRGCADSPVTTP-----------QFY-SASFTGDLRQVVDH 165 (388)
T ss_pred CEEEEECCCCCCCCCHHHH--HHHHH-HHHCCCEEEEEecCCCCCCCCCCc-----------CEE-cCCchHHHHHHHHH
Confidence 348889998876542 221 12222 234699999999999999964221 111 13456799999999
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccc--cceeEEecCccc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI--AIGALASSAPIL 230 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~--v~g~vasSapv~ 230 (288)
++.++. +.+++++|+||||++++.+..++|+. |.++++.++|..
T Consensus 166 l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 166 VAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred HHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 987653 46899999999999999999999987 888887787763
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.34 E-value=1.2e-11 Score=119.52 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=73.9
Q ss_pred ccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHH----
Q 023020 98 HWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQ---- 173 (288)
Q Consensus 98 ~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~q---- 173 (288)
+|.+++.+.||||+||..++...+.. .+..+++ ++.|+++|+||||.|..... .+.+.++
T Consensus 98 ~~~~~~~~p~vvllHG~~~~~~~~~~---~~~~L~~--~~~vi~~D~rG~G~S~~~~~-----------~~~~~~~~~~~ 161 (402)
T PLN02894 98 TFDSKEDAPTLVMVHGYGASQGFFFR---NFDALAS--RFRVIAIDQLGWGGSSRPDF-----------TCKSTEETEAW 161 (402)
T ss_pred EecCCCCCCEEEEECCCCcchhHHHH---HHHHHHh--CCEEEEECCCCCCCCCCCCc-----------ccccHHHHHHH
Confidence 34433334679999998765544322 2455664 58999999999999963211 1122333
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 174 ALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 174 al~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
.++|+..+++.+ + ..+++++||||||.+|+.++.+||+.|.++|+.+++
T Consensus 162 ~~~~i~~~~~~l----~--~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 162 FIDSFEEWRKAK----N--LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HHHHHHHHHHHc----C--CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 344444554432 1 248999999999999999999999999999987543
No 39
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.34 E-value=4.3e-12 Score=109.57 Aligned_cols=93 Identities=19% Similarity=0.215 Sum_probs=68.5
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.||+|+||..++...|. .+...+++ ++.|+++|+||||.|.+.. ..+.++.++|+..++
T Consensus 5 ~~iv~~HG~~~~~~~~~---~~~~~l~~--~~~vi~~d~~G~G~s~~~~-------------~~~~~~~~~~~~~~~--- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFR---CLDEELSA--HFTLHLVDLPGHGRSRGFG-------------PLSLADAAEAIAAQA--- 63 (245)
T ss_pred ceEEEEcCCCCchhhHH---HHHHhhcc--CeEEEEecCCcCccCCCCC-------------CcCHHHHHHHHHHhC---
Confidence 47999999766554321 23334443 6899999999999986421 235666666654432
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
..+++++||||||.+++.++.++|+.+.++|+.+
T Consensus 64 -------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~ 97 (245)
T TIGR01738 64 -------PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVA 97 (245)
T ss_pred -------CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEec
Confidence 2489999999999999999999999999998754
No 40
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.33 E-value=8.9e-12 Score=119.81 Aligned_cols=107 Identities=13% Similarity=0.041 Sum_probs=83.0
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||..++...|. ..+..|++ ++.|+++|+||||.|.+.... .....+.++.+.|+..|++.
T Consensus 127 ~~~ivllHG~~~~~~~w~---~~~~~L~~--~~~Via~DlpG~G~S~~p~~~--------~~~~ys~~~~a~~l~~~i~~ 193 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYR---KVLPVLSK--NYHAIAFDWLGFGFSDKPQPG--------YGFNYTLDEYVSSLESLIDE 193 (383)
T ss_pred CCeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCCccc--------ccccCCHHHHHHHHHHHHHH
Confidence 457999999876655332 23445554 799999999999999642210 01235889999999999988
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
+.. .+++++|||+||++|..++.+||+.|.++|+.+++..
T Consensus 194 l~~------~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 194 LKS------DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred hCC------CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 742 4799999999999999999999999999999887653
No 41
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.32 E-value=1e-11 Score=112.86 Aligned_cols=131 Identities=23% Similarity=0.301 Sum_probs=91.6
Q ss_pred eeEEEeecCCCCCCCCCeEEEEEEEeccccCCCCCCccEEEE-eCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccc
Q 023020 70 TRYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGPIFLY-CGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYG 148 (288)
Q Consensus 70 ~~~f~Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~pI~l~-~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG 148 (288)
..||+.+.|---.....||+--+-.+. .+.+||+++ |||..+.-.|. -+..++.......++++|.||||
T Consensus 44 s~yFdekedv~i~~~~~t~n~Y~t~~~------~t~gpil~l~HG~G~S~LSfA---~~a~el~s~~~~r~~a~DlRgHG 114 (343)
T KOG2564|consen 44 SDYFDEKEDVSIDGSDLTFNVYLTLPS------ATEGPILLLLHGGGSSALSFA---IFASELKSKIRCRCLALDLRGHG 114 (343)
T ss_pred HHhhccccccccCCCcceEEEEEecCC------CCCccEEEEeecCcccchhHH---HHHHHHHhhcceeEEEeeccccC
Confidence 358999888766554457764442221 234788775 66655544332 34567777778899999999999
Q ss_pred cCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH--hcccccceeEE
Q 023020 149 ESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL--KYPHIAIGALA 224 (288)
Q Consensus 149 ~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~--kyP~~v~g~va 224 (288)
+|+-... ..++.|..+.|+..+++.+-.+ ...+++++||||||+||++.+. .-|. +.|++.
T Consensus 115 eTk~~~e-----------~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~v 177 (343)
T KOG2564|consen 115 ETKVENE-----------DDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVV 177 (343)
T ss_pred ccccCCh-----------hhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceEE
Confidence 9973221 3488999999999998877543 3568999999999999988763 3566 556554
No 42
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.24 E-value=5.7e-11 Score=110.33 Aligned_cols=117 Identities=22% Similarity=0.301 Sum_probs=87.3
Q ss_pred EEEEEeccccCCCCCCcc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCc
Q 023020 90 QRYLINTDHWVGPNRLGP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY 168 (288)
Q Consensus 90 qry~~~~~~~~~~~~~~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~y 168 (288)
.|+++... + ++ ++| |+++||....--.+ .--+..++. .|+.|+++|.||||.|..-.. ...
T Consensus 32 I~~h~~e~-g--~~-~gP~illlHGfPe~wysw---r~q~~~la~-~~~rviA~DlrGyG~Sd~P~~----------~~~ 93 (322)
T KOG4178|consen 32 IRLHYVEG-G--PG-DGPIVLLLHGFPESWYSW---RHQIPGLAS-RGYRVIAPDLRGYGFSDAPPH----------ISE 93 (322)
T ss_pred EEEEEEee-c--CC-CCCEEEEEccCCccchhh---hhhhhhhhh-cceEEEecCCCCCCCCCCCCC----------cce
Confidence 56777665 2 22 356 56678876432211 122445665 469999999999999974222 234
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 169 lt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
.|++..+.|+..+++++. ..+++++||+||+++|-++++.||++|+|.|..+.|..
T Consensus 94 Yt~~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 94 YTIDELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred eeHHHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 689999999999999987 25899999999999999999999999999998776554
No 43
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.23 E-value=4.9e-11 Score=112.62 Aligned_cols=118 Identities=16% Similarity=0.241 Sum_probs=78.2
Q ss_pred ccEEEEeCCCCCch--hhhh--hcchHHHHH---H---HhCCEEEeeeccc--cccCCCCCCccccccccccCCccCHHH
Q 023020 106 GPIFLYCGNEGDIE--WFAV--NSGFVWDIA---P---RFGAMLVFPEHRY--YGESMPYGSTEVAYQNATTLSYLTAEQ 173 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~--~~~~--~~~~~~~lA---~---~~g~~Vi~lEhRg--yG~S~P~~~~~~~~~~~~~l~ylt~~q 173 (288)
.+|+|+||-.++.. .+.. +.|+|..+. + ..++.||++|+|| ||.|.|......+..-..+....++++
T Consensus 32 ~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~ 111 (351)
T TIGR01392 32 NAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRD 111 (351)
T ss_pred CEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHH
Confidence 57999999766542 1111 123444442 1 2478999999999 677765221000000000112368899
Q ss_pred HHHHHHHHHHHHHHhcCCCCCC-EEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 174 ALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 174 al~Dl~~fi~~l~~~~~~~~~~-~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
..+|+..+++.+.. .+ ++++||||||++|+.++.+||+.|.++|+.+++.
T Consensus 112 ~~~~~~~~~~~l~~------~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 112 DVKAQKLLLDHLGI------EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHcCC------CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 99999999887632 35 9999999999999999999999999999876543
No 44
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.23 E-value=6.9e-11 Score=103.93 Aligned_cols=116 Identities=21% Similarity=0.277 Sum_probs=82.0
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
.||++||+.++...+....+ +..++++.|+.|+++|+|++|.+...-+. + .... +. .......|+..+++.++
T Consensus 15 ~vv~lHG~~~~~~~~~~~~~-~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~---~-~~~~-~~-~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 15 LVLALHGCGQTASAYVIDWG-WKAAADRYGFVLVAPEQTSYNSSNNCWDW---F-FTHH-RA-RGTGEVESLHQLIDAVK 87 (212)
T ss_pred EEEEeCCCCCCHHHHhhhcC-hHHHHHhCCeEEEecCCcCccccCCCCCC---C-Cccc-cC-CCCccHHHHHHHHHHHH
Confidence 47778998877665432223 56788888999999999999865321000 0 0000 00 01234677888888888
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.++..+..+++++|+|+||.+++.++.++|+.+.++++.|++.
T Consensus 88 ~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 88 ANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 7766666799999999999999999999999999988777665
No 45
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.21 E-value=4.8e-11 Score=111.53 Aligned_cols=104 Identities=22% Similarity=0.259 Sum_probs=71.7
Q ss_pred CCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccC-HHHHHHHHHHHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLT-AEQALADFAVFI 182 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt-~~qal~Dl~~fi 182 (288)
...|+||+||-++...-|..| +..||+ ...|+++|..|+|.|+. +.. +. +..+ .++.++-+++..
T Consensus 89 ~~~plVliHGyGAg~g~f~~N---f~~La~--~~~vyaiDllG~G~SSR-P~F-----~~---d~~~~e~~fvesiE~WR 154 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRN---FDDLAK--IRNVYAIDLLGFGRSSR-PKF-----SI---DPTTAEKEFVESIEQWR 154 (365)
T ss_pred CCCcEEEEeccchhHHHHHHh---hhhhhh--cCceEEecccCCCCCCC-CCC-----CC---CcccchHHHHHHHHHHH
Confidence 357999999966554433222 567887 67899999999999863 111 10 1122 223333333333
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
... + -.|.+|+|||+||.||+-|++|||+.|.-+|+.|+
T Consensus 155 ~~~----~--L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP 193 (365)
T KOG4409|consen 155 KKM----G--LEKMILVGHSFGGYLAAKYALKYPERVEKLILVSP 193 (365)
T ss_pred HHc----C--CcceeEeeccchHHHHHHHHHhChHhhceEEEecc
Confidence 322 2 24899999999999999999999999999999663
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.20 E-value=9.3e-11 Score=110.12 Aligned_cols=101 Identities=19% Similarity=0.164 Sum_probs=76.5
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||+|+||..++...|. .+...|++ ++.|+++|+||||.|.+... ..+.++..+|+..+++.
T Consensus 131 ~~~vl~~HG~~~~~~~~~---~~~~~l~~--~~~v~~~d~~g~G~s~~~~~------------~~~~~~~~~~~~~~~~~ 193 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNWL---FNHAALAA--GRPVIALDLPGHGASSKAVG------------AGSLDELAAAVLAFLDA 193 (371)
T ss_pred CCeEEEECCCCCccchHH---HHHHHHhc--CCEEEEEcCCCCCCCCCCCC------------CCCHHHHHHHHHHHHHh
Confidence 467999999877655432 12334444 58999999999999954221 24677888888888765
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+. ..+++++|||+||.+|+.++.++|+.+.++++.+++
T Consensus 194 ~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 194 LG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred cC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 42 247999999999999999999999999999987654
No 47
>PRK10985 putative hydrolase; Provisional
Probab=99.17 E-value=1.8e-10 Score=107.81 Aligned_cols=109 Identities=20% Similarity=0.193 Sum_probs=74.9
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.+|+++||..++...... ..+...++ +.|+.|+.+|+||||.|..... +..+. ..+.|+..+++.+
T Consensus 59 p~vll~HG~~g~~~~~~~-~~~~~~l~-~~G~~v~~~d~rG~g~~~~~~~-----------~~~~~-~~~~D~~~~i~~l 124 (324)
T PRK10985 59 PRLVLFHGLEGSFNSPYA-HGLLEAAQ-KRGWLGVVMHFRGCSGEPNRLH-----------RIYHS-GETEDARFFLRWL 124 (324)
T ss_pred CEEEEeCCCCCCCcCHHH-HHHHHHHH-HCCCEEEEEeCCCCCCCccCCc-----------ceECC-CchHHHHHHHHHH
Confidence 458888998765432111 12233344 4699999999999997742111 01111 1357888888888
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccc--cceeEEecCccc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI--AIGALASSAPIL 230 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~--v~g~vasSapv~ 230 (288)
+..++ ..|++++||||||.+++.+..++++. +.++++.++|..
T Consensus 125 ~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 125 QREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred HHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 87653 45899999999999999888888754 788888788864
No 48
>PRK07581 hypothetical protein; Validated
Probab=99.17 E-value=1.2e-10 Score=109.03 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=54.2
Q ss_pred hCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCC-EEEeecChhHHHHHHHHH
Q 023020 135 FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 135 ~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~-~il~G~SyGG~lAa~~~~ 213 (288)
.++.||++|+||||.|.+..+....+ +.+.....+ ..+|++.....+...++ -.+ ++++||||||++|..++.
T Consensus 70 ~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~l~~~lg--i~~~~~lvG~S~GG~va~~~a~ 143 (339)
T PRK07581 70 EKYFIIIPNMFGNGLSSSPSNTPAPF-NAARFPHVT---IYDNVRAQHRLLTEKFG--IERLALVVGWSMGAQQTYHWAV 143 (339)
T ss_pred CceEEEEecCCCCCCCCCCCCCCCCC-CCCCCCcee---HHHHHHHHHHHHHHHhC--CCceEEEEEeCHHHHHHHHHHH
Confidence 37899999999999996322100000 111111122 33444442222222222 247 589999999999999999
Q ss_pred hcccccceeEEecC
Q 023020 214 KYPHIAIGALASSA 227 (288)
Q Consensus 214 kyP~~v~g~vasSa 227 (288)
+||+.|.++|+.++
T Consensus 144 ~~P~~V~~Lvli~~ 157 (339)
T PRK07581 144 RYPDMVERAAPIAG 157 (339)
T ss_pred HCHHHHhhheeeec
Confidence 99999999987643
No 49
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.16 E-value=2e-10 Score=127.65 Aligned_cols=122 Identities=20% Similarity=0.162 Sum_probs=84.7
Q ss_pred EEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccC
Q 023020 91 RYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLT 170 (288)
Q Consensus 91 ry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt 170 (288)
+||+.-..+.....+.||+|+||..++...|. .++..+++ ++.|+++|+||||.|....... ....-..++
T Consensus 1357 ~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~---~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~----~~~~~~~~s 1427 (1655)
T PLN02980 1357 SCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWI---PIMKAISG--SARCISIDLPGHGGSKIQNHAK----ETQTEPTLS 1427 (1655)
T ss_pred EEEEEEEecCCCCCCCeEEEECCCCCCHHHHH---HHHHHHhC--CCEEEEEcCCCCCCCCCccccc----cccccccCC
Confidence 45554333322112457999999887766432 23445544 5899999999999996422100 000112457
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
++...+|+..+++.+. ..+++++||||||++|..++.+||+.|.++|+.++
T Consensus 1428 i~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1428 VELVADLLYKLIEHIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred HHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 8888889988887653 24899999999999999999999999999987654
No 50
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.16 E-value=5.5e-10 Score=103.76 Aligned_cols=145 Identities=21% Similarity=0.206 Sum_probs=102.0
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
..|++++||--|+..++ .++-..|++..+..|+++|.|-||.|.... -++.+.+.+|+..|++.
T Consensus 52 ~Pp~i~lHGl~GS~~Nw---~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-------------~h~~~~ma~dv~~Fi~~ 115 (315)
T KOG2382|consen 52 APPAIILHGLLGSKENW---RSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-------------VHNYEAMAEDVKLFIDG 115 (315)
T ss_pred CCceEEecccccCCCCH---HHHHHHhcccccCceEEEecccCCCCcccc-------------ccCHHHHHHHHHHHHHH
Confidence 46899999999888754 356678898999999999999999995322 24577899999999999
Q ss_pred HHHhcCCCCCCEEEeecChhH-HHHHHHHHhcccccceeEEe-cCccccccCCCChhhHHHHHHHHhhhcCcch---HHH
Q 023020 185 LKQNLSAEASPVVLFGGSYGG-MLAAWMRLKYPHIAIGALAS-SAPILQFEDIVPPETFYNIVSSDFKRESASC---FNT 259 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG-~lAa~~~~kyP~~v~g~vas-Sapv~~~~~~~~~~~y~~~v~~~~~~~~~~C---~~~ 259 (288)
++... ...|+++.|||||| .+++....++|+.+.-+|.- .+|-..-.....+.+++..+.+ .+.| ...
T Consensus 116 v~~~~--~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~-----~d~~~~~~~~ 188 (315)
T KOG2382|consen 116 VGGST--RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQ-----LDLSIGVSRG 188 (315)
T ss_pred ccccc--ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHh-----cccccccccc
Confidence 87542 24589999999999 88888999999998888764 5664221122224444444432 2333 344
Q ss_pred HHHHHHHHHHHhc
Q 023020 260 IKESWGELVSVGQ 272 (288)
Q Consensus 260 i~~~~~~i~~l~~ 272 (288)
.+++.+.+.++..
T Consensus 189 rke~~~~l~~~~~ 201 (315)
T KOG2382|consen 189 RKEALKSLIEVGF 201 (315)
T ss_pred HHHHHHHHHHHhc
Confidence 4555555555443
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.16 E-value=9.9e-11 Score=101.07 Aligned_cols=78 Identities=26% Similarity=0.309 Sum_probs=64.3
Q ss_pred CEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 137 AMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 137 ~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
+.|+++|+||+|.|.|.... .+...+.++..+|+..+++.+.. .+++++||||||+++..++.+||
T Consensus 1 f~vi~~d~rG~g~S~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~------~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDP--------DFPDYTTDDLAADLEALREALGI------KKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGS--------GSCTHCHHHHHHHHHHHHHHHTT------SSEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCCCCCCCCCccC--------CcccccHHHHHHHHHHHHHHhCC------CCeEEEEECCChHHHHHHHHHCc
Confidence 47999999999999861111 23456788888898888887653 36999999999999999999999
Q ss_pred cccceeEEecCc
Q 023020 217 HIAIGALASSAP 228 (288)
Q Consensus 217 ~~v~g~vasSap 228 (288)
+.|.++|+.+++
T Consensus 67 ~~v~~lvl~~~~ 78 (230)
T PF00561_consen 67 ERVKKLVLISPP 78 (230)
T ss_dssp GGEEEEEEESES
T ss_pred hhhcCcEEEeee
Confidence 999999998775
No 52
>PRK10566 esterase; Provisional
Probab=99.15 E-value=2.8e-10 Score=101.28 Aligned_cols=107 Identities=19% Similarity=0.247 Sum_probs=72.0
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCc--cCHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSY--LTAEQALADFAVFIT 183 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~y--lt~~qal~Dl~~fi~ 183 (288)
..||++||+.++...+. .+...+++ .|+.|+++|+||||.|.+... ...+.. -...+.++|+..+++
T Consensus 28 p~vv~~HG~~~~~~~~~---~~~~~l~~-~G~~v~~~d~~g~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 96 (249)
T PRK10566 28 PTVFFYHGFTSSKLVYS---YFAVALAQ-AGFRVIMPDAPMHGARFSGDE-------ARRLNHFWQILLQNMQEFPTLRA 96 (249)
T ss_pred CEEEEeCCCCcccchHH---HHHHHHHh-CCCEEEEecCCcccccCCCcc-------ccchhhHHHHHHHHHHHHHHHHH
Confidence 35788899877654331 22344554 599999999999998743111 111111 112456788888888
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeE
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGAL 223 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~v 223 (288)
.+......+..+++++|||+||.+|++++.++|+...+++
T Consensus 97 ~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~ 136 (249)
T PRK10566 97 AIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVAS 136 (249)
T ss_pred HHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEE
Confidence 8765432345689999999999999999999998654443
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.14 E-value=5.7e-10 Score=102.06 Aligned_cols=108 Identities=15% Similarity=0.037 Sum_probs=76.7
Q ss_pred ccEEEEeCCCCCc-hhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDI-EWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~pI~l~~Ggeg~~-~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
.+|+++|||.+.. .++.....+...+++ .|+.|+++|+||||+|.+ . ..+.++...|+..+++.
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~-~G~~v~~~Dl~G~G~S~~--~------------~~~~~~~~~d~~~~~~~ 91 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAE-AGFPVLRFDYRGMGDSEG--E------------NLGFEGIDADIAAAIDA 91 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHH-CCCEEEEeCCCCCCCCCC--C------------CCCHHHHHHHHHHHHHH
Confidence 5788888876432 222111122334443 489999999999999853 1 12456788999999999
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
++.+.. ...+++++|||+||.+++.++.. ++.|.++|+.++++.
T Consensus 92 l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 92 FREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 986531 12469999999999999998765 467999999887765
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=99.11 E-value=2.7e-10 Score=112.93 Aligned_cols=104 Identities=19% Similarity=0.134 Sum_probs=73.7
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
+.||||+||..++...|. .+...++ .++.|+++|+||||.|.+... ....+.++.++|+..+++.
T Consensus 25 ~~~ivllHG~~~~~~~w~---~~~~~L~--~~~~Vi~~D~~G~G~S~~~~~----------~~~~~~~~~a~dl~~~i~~ 89 (582)
T PRK05855 25 RPTVVLVHGYPDNHEVWD---GVAPLLA--DRFRVVAYDVRGAGRSSAPKR----------TAAYTLARLADDFAAVIDA 89 (582)
T ss_pred CCeEEEEcCCCchHHHHH---HHHHHhh--cceEEEEecCCCCCCCCCCCc----------ccccCHHHHHHHHHHHHHH
Confidence 467999999876654331 2334443 378999999999999964222 1245889999999999998
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHh--cccccceeEEecCc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLK--YPHIAIGALASSAP 228 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~k--yP~~v~g~vasSap 228 (288)
+.. ..|++++||||||+++..++.. +|+.+..+++.++|
T Consensus 90 l~~-----~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 90 VSP-----DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred hCC-----CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 642 2479999999999999777655 45555555544444
No 55
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.02 E-value=1.8e-09 Score=103.42 Aligned_cols=117 Identities=16% Similarity=0.166 Sum_probs=76.7
Q ss_pred ccEEEEeCCCCCchhhh------hhcchHHHHHH------HhCCEEEeeecccc-ccC-CCCCCccccccc-cccCCccC
Q 023020 106 GPIFLYCGNEGDIEWFA------VNSGFVWDIAP------RFGAMLVFPEHRYY-GES-MPYGSTEVAYQN-ATTLSYLT 170 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~------~~~~~~~~lA~------~~g~~Vi~lEhRgy-G~S-~P~~~~~~~~~~-~~~l~ylt 170 (288)
.||||+||..++...+. ...|+|..+.. ..++.||++|+||+ |.| .|.......-+. ..+....|
T Consensus 49 p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~ 128 (379)
T PRK00175 49 NAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVIT 128 (379)
T ss_pred CEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCC
Confidence 46999999887765221 00123444321 23789999999983 444 442110000000 00011368
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCC-EEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~-~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+++..+|+..+++++.. .+ .+++||||||++|..++.+||+.|.++|+.++.
T Consensus 129 ~~~~~~~~~~~l~~l~~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 129 IRDWVRAQARLLDALGI------TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred HHHHHHHHHHHHHHhCC------CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 99999999999988653 35 589999999999999999999999999987543
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.01 E-value=2e-09 Score=101.70 Aligned_cols=109 Identities=13% Similarity=0.162 Sum_probs=78.7
Q ss_pred CccEEEEeCCCCCch--hhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHH-HHHHH
Q 023020 105 LGPIFLYCGNEGDIE--WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALA-DFAVF 181 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~--~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~-Dl~~f 181 (288)
+.||+++||--.... ......++...+++ .|+.|+++|+|++|.|.. ..+.++.+. |+...
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~-~G~~V~~~D~~g~g~s~~---------------~~~~~d~~~~~~~~~ 125 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLE-RGQDVYLIDWGYPDRADR---------------YLTLDDYINGYIDKC 125 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHH-CCCeEEEEeCCCCCHHHh---------------cCCHHHHHHHHHHHH
Confidence 368888887421110 01112345555554 599999999999998742 235566654 47788
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~ 231 (288)
++.+.+..+ ..+++++||||||++++.+..++|+.|.++++.++|+..
T Consensus 126 v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 126 VDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 888876543 358999999999999999999999999999998888753
No 57
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.98 E-value=3.8e-09 Score=102.60 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=71.4
Q ss_pred CccEEEEeCCCCCc-hhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDI-EWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~-~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
..|+|++|||.++. +.++. .+...++ +.|+.|+.+|.||||.|..... .. ..+... ..+++
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~--~~~~~La-~~Gy~vl~~D~pG~G~s~~~~~-------~~-----d~~~~~---~avld 254 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYR--LFRDYLA-PRGIAMLTIDMPSVGFSSKWKL-------TQ-----DSSLLH---QAVLN 254 (414)
T ss_pred CccEEEEeCCcccchhhhHH--HHHHHHH-hCCCEEEEECCCCCCCCCCCCc-------cc-----cHHHHH---HHHHH
Confidence 36888888886543 22211 1223444 4599999999999999964211 00 111111 23444
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
.+......+..++.++|+||||.+|+.++..+|+.++++|+.++++.
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 44433222346899999999999999999999999999999877764
No 58
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.96 E-value=3.6e-09 Score=99.71 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=76.2
Q ss_pred CCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.+.||+++||-.++...|. ..+..+++..|..|.++|..|||.|.+.+.. ..++.. |....+.
T Consensus 57 ~~~pvlllHGF~~~~~~w~---~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~----------~~y~~~----~~v~~i~ 119 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWR---RVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG----------PLYTLR----ELVELIR 119 (326)
T ss_pred CCCcEEEeccccCCcccHh---hhccccccccceEEEEEecCCCCcCCCCCCC----------Cceehh----HHHHHHH
Confidence 4578999999776554332 2355777777899999999999976554331 113333 2233333
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeE---EecCcccc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGAL---ASSAPILQ 231 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~v---asSapv~~ 231 (288)
.+-.++. ..|++++||||||.+|..++..||+.|++++ ...+|...
T Consensus 120 ~~~~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 120 RFVKEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS 168 (326)
T ss_pred HHHHhhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccccccc
Confidence 3333322 3579999999999999999999999999999 66666654
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.95 E-value=6e-09 Score=84.47 Aligned_cols=93 Identities=22% Similarity=0.259 Sum_probs=66.7
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
|||++||+.++...+ ..+...++++ |+.|+.+|+|++|.+.. . + ..+++++++.
T Consensus 1 ~vv~~HG~~~~~~~~---~~~~~~l~~~-G~~v~~~~~~~~~~~~~--~--------~-----~~~~~~~~~~------- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY---QPLAEALAEQ-GYAVVAFDYPGHGDSDG--A--------D-----AVERVLADIR------- 54 (145)
T ss_dssp EEEEECTTTTTTHHH---HHHHHHHHHT-TEEEEEESCTTSTTSHH--S--------H-----HHHHHHHHHH-------
T ss_pred CEEEECCCCCCHHHH---HHHHHHHHHC-CCEEEEEecCCCCccch--h--------H-----HHHHHHHHHH-------
Confidence 689999988765543 2345566665 99999999999998821 0 0 1233333332
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
.+.. +..+++++|||+||.+++.+..++ ..+.++|+.++
T Consensus 55 ~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 55 AGYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred hhcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 2222 346999999999999999999999 66999998665
No 60
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.93 E-value=1e-08 Score=99.97 Aligned_cols=109 Identities=16% Similarity=0.035 Sum_probs=75.4
Q ss_pred CccEEEEeCCCCCchh-hhhhcchHHHHHHH-hCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEW-FAVNSGFVWDIAPR-FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~-~~~~~~~~~~lA~~-~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
+.|+|++||..++..+ .+. ..+...+... -+++||++|.|++|.|..... . ..++.+.+|++.|+
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~-~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-------~-----~~t~~vg~~la~lI 107 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWV-PKLVAALYEREPSANVIVVDWLSRAQQHYPTS-------A-----AYTKLVGKDVAKFV 107 (442)
T ss_pred CCeEEEECCCCcCCcchhhH-HHHHHHHHhccCCCEEEEEECCCcCCCCCccc-------c-----ccHHHHHHHHHHHH
Confidence 3678999997643311 111 0112222222 268999999999998752111 1 12466778899999
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
+.+......+-.+++++||||||.+|..++..+|+.|..+++..
T Consensus 108 ~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLD 151 (442)
T TIGR03230 108 NWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLD 151 (442)
T ss_pred HHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEc
Confidence 98875544445689999999999999999999999999888753
No 61
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.90 E-value=3.1e-08 Score=90.67 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=71.5
Q ss_pred cc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeec--cccccCCCCCCc----ccc-cc--ccccCC-ccCHH-H
Q 023020 106 GP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEH--RYYGESMPYGST----EVA-YQ--NATTLS-YLTAE-Q 173 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEh--RgyG~S~P~~~~----~~~-~~--~~~~l~-ylt~~-q 173 (288)
.| |+++||..++.+.+. +.+.+..++.+.|+.||++|. ||+|.+.-.... ..+ |. +....+ ..+.+ .
T Consensus 42 ~P~vvllHG~~~~~~~~~-~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFM-IKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCEEEEccCCCCCccHHH-hhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 45 677788776665432 223355788778999999997 666643200000 000 00 000000 11222 2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 174 ALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 174 al~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.+.|+..+++ ..+..+..+++++|+||||.+|++++.++|+.+.++++.++..
T Consensus 121 ~~~~l~~~~~---~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVA---AQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHH---hhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 2344544443 3333445689999999999999999999999999988866543
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.90 E-value=5.2e-09 Score=88.91 Aligned_cols=101 Identities=23% Similarity=0.257 Sum_probs=72.5
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHh-CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRF-GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~-g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
.||+++||+.++...+.. ....+.... .+.|+++|.||||.|.+. ..+.....+|+..+++.
T Consensus 22 ~~i~~~hg~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~g~g~s~~~--------------~~~~~~~~~~~~~~~~~ 84 (282)
T COG0596 22 PPLVLLHGFPGSSSVWRP---VFKVLPALAARYRVIAPDLRGHGRSDPA--------------GYSLSAYADDLAALLDA 84 (282)
T ss_pred CeEEEeCCCCCchhhhHH---HHHHhhccccceEEEEecccCCCCCCcc--------------cccHHHHHHHHHHHHHH
Confidence 489999999876654322 112222221 179999999999999610 01122337888888875
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+.. .+++++||||||.++..++.++|+.+.++++.+++.
T Consensus 85 ~~~------~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 85 LGL------EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred hCC------CceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 542 359999999999999999999999999999877654
No 63
>PRK13604 luxD acyl transferase; Provisional
Probab=98.89 E-value=2.2e-08 Score=93.41 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=70.7
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecccc-ccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYY-GESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgy-G~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
...|++.||-.+....+ ..+...|+ +.|+.|+.+|.|++ |+|. ++. +..++.....|+...++
T Consensus 37 ~~~vIi~HGf~~~~~~~---~~~A~~La-~~G~~vLrfD~rg~~GeS~--G~~----------~~~t~s~g~~Dl~aaid 100 (307)
T PRK13604 37 NNTILIASGFARRMDHF---AGLAEYLS-SNGFHVIRYDSLHHVGLSS--GTI----------DEFTMSIGKNSLLTVVD 100 (307)
T ss_pred CCEEEEeCCCCCChHHH---HHHHHHHH-HCCCEEEEecCCCCCCCCC--Ccc----------ccCcccccHHHHHHHHH
Confidence 35678889876643221 12233344 46999999999998 9994 321 22333345799999999
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+++.+. ..++.++||||||++|...+...| +.++|+-++.
T Consensus 101 ~lk~~~---~~~I~LiG~SmGgava~~~A~~~~--v~~lI~~sp~ 140 (307)
T PRK13604 101 WLNTRG---INNLGLIAASLSARIAYEVINEID--LSFLITAVGV 140 (307)
T ss_pred HHHhcC---CCceEEEEECHHHHHHHHHhcCCC--CCEEEEcCCc
Confidence 998642 358999999999999877766444 8888875533
No 64
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.85 E-value=2.2e-08 Score=90.47 Aligned_cols=101 Identities=18% Similarity=0.246 Sum_probs=81.4
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
..+++.||+..+.. +...+...++..++..|+.+|.+|||.|.-.+. -....+|+.+..+.+
T Consensus 61 ~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps---------------E~n~y~Di~avye~L 122 (258)
T KOG1552|consen 61 PTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS---------------ERNLYADIKAVYEWL 122 (258)
T ss_pred eEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCcc---------------cccchhhHHHHHHHH
Confidence 34666788866665 233456678888899999999999999963221 114678999999999
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
+.+++ ++.+++++|+|+|...+..++.++| +.|+|+-|+
T Consensus 123 r~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SP 161 (258)
T KOG1552|consen 123 RNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSP 161 (258)
T ss_pred HhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEecc
Confidence 99987 6789999999999999999999999 899998664
No 65
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.84 E-value=1.6e-08 Score=93.13 Aligned_cols=107 Identities=15% Similarity=0.025 Sum_probs=74.4
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.++|++||..++....+. ..+...+.++.++.|+++|.++++.+.. .. ...+++....|++.+++.+
T Consensus 37 p~vilIHG~~~~~~~~~~-~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~~-----------a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 37 PTRFIIHGWTSSGEESWI-SDLRKAYLSRGDYNVIVVDWGRGANPNY-PQ-----------AVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred CcEEEEcCCCCCCCCcHH-HHHHHHHHhcCCCEEEEEECccccccCh-HH-----------HHHhHHHHHHHHHHHHHHH
Confidence 568999997765521111 1112234444579999999998843321 10 1124566677888999988
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEe
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALAS 225 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vas 225 (288)
.........+++++||||||.+|..++..+|+.|..+++.
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~L 143 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGL 143 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEe
Confidence 7654334468999999999999999999999999998875
No 66
>PLN02872 triacylglycerol lipase
Probab=98.82 E-value=8.8e-09 Score=99.51 Aligned_cols=111 Identities=17% Similarity=0.093 Sum_probs=73.2
Q ss_pred CccEEEEeCCCCCchhhhh---hcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCC--ccCHH-HHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAV---NSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLS--YLTAE-QALADF 178 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~---~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~--ylt~~-qal~Dl 178 (288)
+.||+|+||..++...|.. ..++...||+ .|+.|++.|.||+|.|...... +..+-+ ..+.+ .+..|+
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~-~GydV~l~n~RG~~~s~gh~~~-----~~~~~~fw~~s~~e~a~~Dl 147 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD-HGFDVWVGNVRGTRWSYGHVTL-----SEKDKEFWDWSWQELALYDL 147 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHh-CCCCcccccccccccccCCCCC-----CccchhccCCcHHHHHHHHH
Confidence 4579999998766554321 1233344564 5999999999999877421111 111111 13554 445899
Q ss_pred HHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc---ccceeEEe
Q 023020 179 AVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH---IAIGALAS 225 (288)
Q Consensus 179 ~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~---~v~g~vas 225 (288)
.++++++... ...+++++|||+||.++. .+..+|+ .|..+++.
T Consensus 148 ~a~id~i~~~---~~~~v~~VGhS~Gg~~~~-~~~~~p~~~~~v~~~~~l 193 (395)
T PLN02872 148 AEMIHYVYSI---TNSKIFIVGHSQGTIMSL-AALTQPNVVEMVEAAALL 193 (395)
T ss_pred HHHHHHHHhc---cCCceEEEEECHHHHHHH-HHhhChHHHHHHHHHHHh
Confidence 9999998643 235899999999999997 4446887 46666663
No 67
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.76 E-value=1.9e-07 Score=82.77 Aligned_cols=107 Identities=18% Similarity=0.156 Sum_probs=82.4
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
..|+|+||.-|+.... ..+.+..++.|+.|.++-.||||-.. .+ +---+.++=+.|+..-.+++
T Consensus 16 ~AVLllHGFTGt~~Dv----r~Lgr~L~e~GyTv~aP~ypGHG~~~--e~----------fl~t~~~DW~~~v~d~Y~~L 79 (243)
T COG1647 16 RAVLLLHGFTGTPRDV----RMLGRYLNENGYTVYAPRYPGHGTLP--ED----------FLKTTPRDWWEDVEDGYRDL 79 (243)
T ss_pred EEEEEEeccCCCcHHH----HHHHHHHHHCCceEecCCCCCCCCCH--HH----------HhcCCHHHHHHHHHHHHHHH
Confidence 7899999988876543 23444555669999999999999763 11 11235677788888777888
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccccc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFE 233 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~~~ 233 (288)
++. ....+.++|-||||.+|++++..|| +.+++..+||+..+.
T Consensus 80 ~~~---gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~ 122 (243)
T COG1647 80 KEA---GYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS 122 (243)
T ss_pred HHc---CCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccccc
Confidence 743 1247999999999999999999999 899999999998643
No 68
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.73 E-value=4.7e-08 Score=98.09 Aligned_cols=109 Identities=15% Similarity=0.042 Sum_probs=75.6
Q ss_pred cc-EEEEeCCCCCchh-hhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 106 GP-IFLYCGNEGDIEW-FAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~-~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.| |+++||....... ..........+++ .|+.|+.+|+||+|.|.. .. ...+ .+.++|+..+++
T Consensus 22 ~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~-~Gy~vv~~D~RG~g~S~g--~~----------~~~~-~~~~~D~~~~i~ 87 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLRWGLDKTEPAWFVA-QGYAVVIQDTRGRGASEG--EF----------DLLG-SDEAADGYDLVD 87 (550)
T ss_pred CCEEEEecCCCCchhhccccccccHHHHHh-CCcEEEEEeccccccCCC--ce----------EecC-cccchHHHHHHH
Confidence 45 5557775443220 0001112334444 599999999999999962 21 1122 467889999999
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.+..+. ..+.++.++|+||||.++..++..+|+.+++++..++..
T Consensus 88 ~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 88 WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 997652 224599999999999999999999999999999865544
No 69
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.73 E-value=1.1e-08 Score=90.48 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=74.8
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.+++.+|++.|+...... ...-+-..++.+|+.+|.||||+|.-.+. .+- ..-|....++++
T Consensus 79 pTlLyfh~NAGNmGhr~~---i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-------E~G--------L~lDs~avldyl 140 (300)
T KOG4391|consen 79 PTLLYFHANAGNMGHRLP---IARVFYVNLKMNVLIVSYRGYGKSEGSPS-------EEG--------LKLDSEAVLDYL 140 (300)
T ss_pred ceEEEEccCCCcccchhh---HHHHHHHHcCceEEEEEeeccccCCCCcc-------ccc--------eeccHHHHHHHH
Confidence 457778999987754322 12334456799999999999999973221 111 123444556777
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEe
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALAS 225 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vas 225 (288)
..+...++.|.+++|.|.||++|...+.+.-+.+.++|+-
T Consensus 141 ~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivE 180 (300)
T KOG4391|consen 141 MTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVE 180 (300)
T ss_pred hcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeee
Confidence 6655556789999999999999999999999999999874
No 70
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.71 E-value=3.8e-08 Score=74.07 Aligned_cols=66 Identities=21% Similarity=0.245 Sum_probs=46.1
Q ss_pred cCCCCC-CccEEEEeCCCCCchhhhhhcchHHHHHHH---hCCEEEeeeccccccCCCCCCccccccccccCCcc-CHHH
Q 023020 99 WVGPNR-LGPIFLYCGNEGDIEWFAVNSGFVWDIAPR---FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL-TAEQ 173 (288)
Q Consensus 99 ~~~~~~-~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~---~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~yl-t~~q 173 (288)
|.++++ ++.|+++||... +.+.+.++|+. .|+.|+++||||||+|.. .. .+. +.++
T Consensus 9 w~p~~~~k~~v~i~HG~~e-------h~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g--~r----------g~~~~~~~ 69 (79)
T PF12146_consen 9 WKPENPPKAVVVIVHGFGE-------HSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEG--KR----------GHIDSFDD 69 (79)
T ss_pred ecCCCCCCEEEEEeCCcHH-------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCCC--cc----------cccCCHHH
Confidence 554443 677888999643 33444445443 599999999999999973 11 233 5899
Q ss_pred HHHHHHHHHH
Q 023020 174 ALADFAVFIT 183 (288)
Q Consensus 174 al~Dl~~fi~ 183 (288)
.++|+..|++
T Consensus 70 ~v~D~~~~~~ 79 (79)
T PF12146_consen 70 YVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 71
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.71 E-value=6.2e-08 Score=100.18 Aligned_cols=103 Identities=21% Similarity=0.272 Sum_probs=68.7
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccc--cccccCCcc----------CHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAY--QNATTLSYL----------TAEQA 174 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~--~~~~~l~yl----------t~~qa 174 (288)
+|+++||-.+....|. .+...+++ .|+.|+++||||||+|....+.+ .. .+...+.|+ +.+|+
T Consensus 451 ~VVllHG~~g~~~~~~---~lA~~La~-~Gy~VIaiDlpGHG~S~~~~~~~-~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 451 VVIYQHGITGAKENAL---AFAGTLAA-AGVATIAIDHPLHGARSFDANAS-GVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred EEEEeCCCCCCHHHHH---HHHHHHHh-CCcEEEEeCCCCCCccccccccc-cccccccCccceeccccccccccCHHHH
Confidence 5788899776665432 23344443 48999999999999994321100 00 001112332 46999
Q ss_pred HHHHHHHHHHHH------Hhc----CCCCCCEEEeecChhHHHHHHHHHh
Q 023020 175 LADFAVFITNLK------QNL----SAEASPVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 175 l~Dl~~fi~~l~------~~~----~~~~~~~il~G~SyGG~lAa~~~~k 214 (288)
+.|+..++..++ .++ ..+..|++++||||||.+++.+...
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 999999999987 221 1345799999999999999999864
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=98.66 E-value=6.4e-07 Score=82.55 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=70.3
Q ss_pred Ccc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCC-------cccccc--cccc---CCccCH
Q 023020 105 LGP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGS-------TEVAYQ--NATT---LSYLTA 171 (288)
Q Consensus 105 ~~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~-------~~~~~~--~~~~---l~ylt~ 171 (288)
+.| |+|+||+.++...+....+ +..++...|+.||++|-.++|.-.+... ....|. ..+. .++.
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~-~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 122 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSG-AQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMY-- 122 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhh-HHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchh--
Confidence 356 5668987766554332222 3456566799999999877662110000 000000 0001 1222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+..++++...++...... +..+++++|+||||.+|++++.+||+.+.++++.++..
T Consensus 123 ~~~~~~l~~~i~~~~~~~--~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 123 DYVVKELPKLLSDNFDQL--DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred hhHHHHHHHHHHHHHHhc--CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 224445554544432222 24579999999999999999999999999888766554
No 73
>PRK10162 acetyl esterase; Provisional
Probab=98.62 E-value=2.6e-07 Score=86.56 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=67.4
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
.|+++|||.........+..+...++++.|+.|+.+|+|.-.+. ++ ..++.|+...++++.
T Consensus 83 ~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-~~------------------p~~~~D~~~a~~~l~ 143 (318)
T PRK10162 83 TLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-RF------------------PQAIEEIVAVCCYFH 143 (318)
T ss_pred EEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-CC------------------CCcHHHHHHHHHHHH
Confidence 36778998743322111223456788888999999999843221 11 124566665555554
Q ss_pred H---hcCCCCCCEEEeecChhHHHHHHHHHhc------ccccceeEEecCcc
Q 023020 187 Q---NLSAEASPVVLFGGSYGGMLAAWMRLKY------PHIAIGALASSAPI 229 (288)
Q Consensus 187 ~---~~~~~~~~~il~G~SyGG~lAa~~~~ky------P~~v~g~vasSapv 229 (288)
. +++.+..+++++|+|+||.||++++.+. |..+.+.++.++.+
T Consensus 144 ~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 144 QHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 3 3444456899999999999999998764 35677877765443
No 74
>PRK11071 esterase YqiA; Provisional
Probab=98.61 E-value=1.6e-07 Score=81.74 Aligned_cols=89 Identities=15% Similarity=0.248 Sum_probs=60.4
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHH--hCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPR--FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~--~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
||+++||..++...+.. ..+.++..+ .++.|+++|.|+||. ++.+++..+++.
T Consensus 3 ~illlHGf~ss~~~~~~--~~~~~~l~~~~~~~~v~~~dl~g~~~-----------------------~~~~~l~~l~~~ 57 (190)
T PRK11071 3 TLLYLHGFNSSPRSAKA--TLLKNWLAQHHPDIEMIVPQLPPYPA-----------------------DAAELLESLVLE 57 (190)
T ss_pred eEEEECCCCCCcchHHH--HHHHHHHHHhCCCCeEEeCCCCCCHH-----------------------HHHHHHHHHHHH
Confidence 69999998877664321 112233322 278999999998852 245566666654
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+. ..+++++|+||||.+|+.++.++|. . +|+.++++
T Consensus 58 ~~------~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~ 93 (190)
T PRK11071 58 HG------GDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAV 93 (190)
T ss_pred cC------CCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCC
Confidence 32 2489999999999999999999994 3 34444443
No 75
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.60 E-value=6.3e-07 Score=80.08 Aligned_cols=116 Identities=23% Similarity=0.293 Sum_probs=78.1
Q ss_pred cc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
.| ||++||..++.+.+...++ +.++|++.|+.|+.+|.-.-.... . ++.-.+....-... -...++.+++.
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~-~~~lAd~~GfivvyP~~~~~~~~~--~----cw~w~~~~~~~g~~-d~~~i~~lv~~ 87 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSG-WNALADREGFIVVYPEQSRRANPQ--G----CWNWFSDDQQRGGG-DVAFIAALVDY 87 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcC-HHHHhhcCCeEEEcccccccCCCC--C----cccccccccccCcc-chhhHHHHHHh
Confidence 46 5668998888877655444 678999999999999964221110 0 00000000000111 13446677777
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+..+++.+..++.+.|.|.||+++..++..|||+|.++...|++.
T Consensus 88 v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 88 VAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 888888888899999999999999999999999998876655443
No 76
>PLN00021 chlorophyllase
Probab=98.58 E-value=4e-07 Score=85.45 Aligned_cols=98 Identities=19% Similarity=0.191 Sum_probs=60.5
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.+|+++||+.+....| ..+...+++ .|+.|+++|+++++.+.. . ..+.|..++++.+
T Consensus 53 PvVv~lHG~~~~~~~y---~~l~~~Las-~G~~VvapD~~g~~~~~~--~-----------------~~i~d~~~~~~~l 109 (313)
T PLN00021 53 PVLLFLHGYLLYNSFY---SQLLQHIAS-HGFIVVAPQLYTLAGPDG--T-----------------DEIKDAAAVINWL 109 (313)
T ss_pred CEEEEECCCCCCcccH---HHHHHHHHh-CCCEEEEecCCCcCCCCc--h-----------------hhHHHHHHHHHHH
Confidence 3478889987655433 234455664 499999999998643211 0 0112222222322
Q ss_pred HHh--------cCCCCCCEEEeecChhHHHHHHHHHhccc-----ccceeEEec
Q 023020 186 KQN--------LSAEASPVVLFGGSYGGMLAAWMRLKYPH-----IAIGALASS 226 (288)
Q Consensus 186 ~~~--------~~~~~~~~il~G~SyGG~lAa~~~~kyP~-----~v~g~vasS 226 (288)
... ...+..+++++|||+||.+|+.++.++|+ .+.++++..
T Consensus 110 ~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ld 163 (313)
T PLN00021 110 SSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLD 163 (313)
T ss_pred HhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeec
Confidence 211 11223589999999999999999999986 356766543
No 77
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.58 E-value=1.9e-07 Score=81.11 Aligned_cols=103 Identities=23% Similarity=0.201 Sum_probs=71.4
Q ss_pred EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHH
Q 023020 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ 187 (288)
Q Consensus 108 I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~ 187 (288)
||++|||......-.....+...+|.+.|+.|+.+|+|-- |.. +..+.+.|+...++.+.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p~~---------------~~p~~~~D~~~a~~~l~~ 61 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----PEA---------------PFPAALEDVKAAYRWLLK 61 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----TTS---------------STTHHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----ccc---------------cccccccccccceeeecc
Confidence 6899999865432222234566888888999999999943 211 235788888888888876
Q ss_pred h---cCCCCCCEEEeecChhHHHHHHHHHhcccc----cceeEEecCcc
Q 023020 188 N---LSAEASPVVLFGGSYGGMLAAWMRLKYPHI----AIGALASSAPI 229 (288)
Q Consensus 188 ~---~~~~~~~~il~G~SyGG~lAa~~~~kyP~~----v~g~vasSapv 229 (288)
+ ++.+..+++++|+|-||.||+.+.....+. +.++++.++..
T Consensus 62 ~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 62 NADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp THHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 5 334456999999999999999998776653 78888877643
No 78
>PRK11460 putative hydrolase; Provisional
Probab=98.56 E-value=7.8e-07 Score=79.66 Aligned_cols=116 Identities=18% Similarity=0.098 Sum_probs=68.3
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHh-CCEEEeeeccccccCCCCCCccccccc----cccCCccCHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRF-GAMLVFPEHRYYGESMPYGSTEVAYQN----ATTLSYLTAEQALADFAV 180 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~-g~~Vi~lEhRgyG~S~P~~~~~~~~~~----~~~l~ylt~~qal~Dl~~ 180 (288)
..||++||..++...+. .+...+++.. ++.++.+ |++..+...... ++-+ .+.-..-.+++.++++..
T Consensus 17 ~~vIlLHG~G~~~~~~~---~l~~~l~~~~~~~~~i~~--~g~~~~~~~~g~--~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 17 QLLLLFHGVGDNPVAMG---EIGSWFAPAFPDALVVSV--GGPEPSGNGAGR--QWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred cEEEEEeCCCCChHHHH---HHHHHHHHHCCCCEEECC--CCCCCcCCCCCc--ccccCCCCCccchHHHHHHHHHHHHH
Confidence 45888999887766432 2344555442 3444444 454322110000 0000 000011124455666666
Q ss_pred HHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 181 FITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 181 fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+++.+..+++.+..+++++|+|+||.+|++++.++|+.+.++++.++.
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 677766665555568999999999999999999999988877765543
No 79
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.56 E-value=9.1e-07 Score=82.69 Aligned_cols=123 Identities=24% Similarity=0.292 Sum_probs=82.3
Q ss_pred EEEEEEEeccccCCCCCCcc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccC
Q 023020 88 FSQRYLINTDHWVGPNRLGP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTL 166 (288)
Q Consensus 88 f~qry~~~~~~~~~~~~~~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l 166 (288)
|..-.|..+.. .+..| ||++||-+|+...-.. .+++..+. +.|+.||+++-||+|.+.-... .
T Consensus 61 ~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~-r~L~~~~~-~rg~~~Vv~~~Rgcs~~~n~~p----------~ 124 (345)
T COG0429 61 FIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYA-RGLMRALS-RRGWLVVVFHFRGCSGEANTSP----------R 124 (345)
T ss_pred EEEEeeccCcc----ccCCceEEEEeccCCCCcCHHH-HHHHHHHH-hcCCeEEEEecccccCCcccCc----------c
Confidence 44445554421 23455 7889999998764322 24444444 4589999999999998853221 1
Q ss_pred CccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhH-HHHHHHHHhccc-ccceeEEecCccc
Q 023020 167 SYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGG-MLAAWMRLKYPH-IAIGALASSAPIL 230 (288)
Q Consensus 167 ~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG-~lAa~~~~kyP~-~v~g~vasSapv~ 230 (288)
-|.+-+- +|++.|++.++.... ..|...+|.|+|| +|+-|+..+--+ .+.++++.|+|+-
T Consensus 125 ~yh~G~t--~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 125 LYHSGET--EDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred eecccch--hHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 1222121 899999999987643 5799999999999 777777655333 3578888888874
No 80
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.51 E-value=2.4e-06 Score=76.57 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=32.6
Q ss_pred CCCCEEEeecChhHHHHHHHHHhcc---cccceeEEecCcccc
Q 023020 192 EASPVVLFGGSYGGMLAAWMRLKYP---HIAIGALASSAPILQ 231 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~~kyP---~~v~g~vasSapv~~ 231 (288)
+..+++++||||||.+|..+....+ +.|.++|.-++|...
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4569999999999999988776544 478999888888864
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.47 E-value=8.8e-07 Score=88.63 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=70.5
Q ss_pred CccEEEEeCCCCCch--hhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHH-HHHHHH
Q 023020 105 LGPIFLYCGNEGDIE--WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQAL-ADFAVF 181 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~--~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal-~Dl~~f 181 (288)
+.||+|+||--.... .....++++..+++ .|+.|+++|.|++|.|... .+.++.+ .++...
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~---------------~~~ddY~~~~i~~a 251 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVE-QGHTVFVISWRNPDASQAD---------------KTFDDYIRDGVIAA 251 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHH-CCcEEEEEECCCCCccccc---------------CChhhhHHHHHHHH
Confidence 479999998532111 11112355656665 4999999999999988421 1222333 345555
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHH----HHHHHhc-ccccceeEEecCccc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLA----AWMRLKY-PHIAIGALASSAPIL 230 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lA----a~~~~ky-P~~v~g~vasSapv~ 230 (288)
++.+....+ ..+++++|||+||.++ ++++... |+.|.++++.++|+.
T Consensus 252 l~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 252 LEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred HHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 565554332 3589999999999985 3455555 888999998888864
No 82
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.44 E-value=3.8e-07 Score=79.74 Aligned_cols=91 Identities=19% Similarity=0.197 Sum_probs=64.0
Q ss_pred HHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHH
Q 023020 131 IAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAW 210 (288)
Q Consensus 131 lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~ 210 (288)
+..+.|+.|+.++.||.+.... + + .+....-.-...+.|+...++.+.++...+..++.++|+|+||.++++
T Consensus 9 ~la~~Gy~v~~~~~rGs~g~g~--~----~--~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 9 LLASQGYAVLVPNYRGSGGYGK--D----F--HEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp HHHTTT-EEEEEE-TTSSSSHH--H----H--HHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred HHHhCCEEEEEEcCCCCCccch--h----H--HHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 3335699999999998763210 0 0 000111123467899999999998765445569999999999999999
Q ss_pred HHHhcccccceeEEecCcc
Q 023020 211 MRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 211 ~~~kyP~~v~g~vasSapv 229 (288)
+...+|+.+.++++.+++.
T Consensus 81 ~~~~~~~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVS 99 (213)
T ss_dssp HHHHTCCGSSEEEEESE-S
T ss_pred hhcccceeeeeeeccceec
Confidence 9999999999998866554
No 83
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.44 E-value=1.1e-06 Score=89.47 Aligned_cols=110 Identities=20% Similarity=0.228 Sum_probs=70.1
Q ss_pred c-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc---ccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 107 P-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR---YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 107 p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR---gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
| |+++|||+.....+ .....+..++. .|+.|+.++.| |||+.-.... ...+.. ..++|+...+
T Consensus 395 P~i~~~hGGP~~~~~~-~~~~~~q~~~~-~G~~V~~~n~RGS~GyG~~F~~~~-------~~~~g~----~~~~D~~~~~ 461 (620)
T COG1506 395 PLIVYIHGGPSAQVGY-SFNPEIQVLAS-AGYAVLAPNYRGSTGYGREFADAI-------RGDWGG----VDLEDLIAAV 461 (620)
T ss_pred CEEEEeCCCCcccccc-ccchhhHHHhc-CCeEEEEeCCCCCCccHHHHHHhh-------hhccCC----ccHHHHHHHH
Confidence 5 66689997443321 11223445554 59999999999 4665521110 011122 3456666666
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
+.+.+.-..+..++.++||||||.+++|...+.| .++++++..+.+.
T Consensus 462 ~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 462 DALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred HHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 6554432234468999999999999999999999 7888887665554
No 84
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.43 E-value=1.2e-06 Score=76.84 Aligned_cols=97 Identities=22% Similarity=0.235 Sum_probs=68.0
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhC---CEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFG---AMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g---~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
.|||++|++.|+...| ..||+..+ ..|+.+++++.+...+ ...++++.+++++.-|
T Consensus 1 ~~lf~~p~~gG~~~~y-------~~la~~l~~~~~~v~~i~~~~~~~~~~--------------~~~si~~la~~y~~~I 59 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY-------RPLARALPDDVIGVYGIEYPGRGDDEP--------------PPDSIEELASRYAEAI 59 (229)
T ss_dssp -EEEEESSTTCSGGGG-------HHHHHHHTTTEEEEEEECSTTSCTTSH--------------EESSHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHH-------HHHHHhCCCCeEEEEEEecCCCCCCCC--------------CCCCHHHHHHHHHHHh
Confidence 3899999999977654 35555543 5699999999984332 1246888888877666
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhc---ccccceeEEecCc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY---PHIAIGALASSAP 228 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ky---P~~v~g~vasSap 228 (288)
+... +..|++++|||+||.||..++.+- -..+..+++..+|
T Consensus 60 ~~~~-----~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 60 RARQ-----PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHT-----SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred hhhC-----CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 5432 234999999999999998887543 3447777766543
No 85
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.26 E-value=3.9e-06 Score=81.05 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=59.9
Q ss_pred CCEEEeeeccccccCC-CC----CCccccccccc----cCCccCHHHHHHHHHHHHHHHHHhcCCCCCCE-EEeecChhH
Q 023020 136 GAMLVFPEHRYYGESM-PY----GSTEVAYQNAT----TLSYLTAEQALADFAVFITNLKQNLSAEASPV-VLFGGSYGG 205 (288)
Q Consensus 136 g~~Vi~lEhRgyG~S~-P~----~~~~~~~~~~~----~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~-il~G~SyGG 205 (288)
.+-||..+.-|=|.|. |. +..+..-.+.+ +-..+|+++.++|+..+++++.. .++ +++||||||
T Consensus 99 ~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi------~~~~~vvG~SmGG 172 (389)
T PRK06765 99 KYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI------ARLHAVMGPSMGG 172 (389)
T ss_pred ceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC------CCceEEEEECHHH
Confidence 6789999999876532 20 00000000011 12236899999999999887542 356 499999999
Q ss_pred HHHHHHHHhcccccceeEEecC
Q 023020 206 MLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 206 ~lAa~~~~kyP~~v~g~vasSa 227 (288)
++|..++.+||+.|.++|+.++
T Consensus 173 ~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 173 MQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred HHHHHHHHHChHhhheEEEEec
Confidence 9999999999999999987643
No 86
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.26 E-value=5.7e-06 Score=77.78 Aligned_cols=98 Identities=21% Similarity=0.237 Sum_probs=72.7
Q ss_pred CCccEEEEeCCCCCchhhhh---hcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAV---NSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~---~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~ 180 (288)
+++-|++..|+.+..+.... ....+.++|++.|++|+.+.+||+|.|. + ..+.++.+.|...
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~--G-------------~~s~~dLv~~~~a 200 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST--G-------------PPSRKDLVKDYQA 200 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC--C-------------CCCHHHHHHHHHH
Confidence 34667777776655443111 1234779999999999999999999995 2 2356889999999
Q ss_pred HHHHHHHhc-CCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 181 FITNLKQNL-SAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 181 fi~~l~~~~-~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
.++++..+. +.....+++.|||.||++++....+.+
T Consensus 201 ~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 201 CVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 999998643 333457999999999999998665554
No 87
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.23 E-value=7.5e-06 Score=87.73 Aligned_cols=109 Identities=14% Similarity=0.072 Sum_probs=72.5
Q ss_pred CccEEEEeCCCCCchhhh--hhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFA--VNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~--~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
+.||+|+||.......|- ...+++..|++ .|+.|+++| ||.|.+... ....+..+.+.++...+
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~-~g~~v~~~d---~G~~~~~~~----------~~~~~l~~~i~~l~~~l 132 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHR-AGLDPWVID---FGSPDKVEG----------GMERNLADHVVALSEAI 132 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHH-CCCEEEEEc---CCCCChhHc----------CccCCHHHHHHHHHHHH
Confidence 468999999765443221 12234555554 489999999 576643111 01246666666666666
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhc-ccccceeEEecCccc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY-PHIAIGALASSAPIL 230 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ky-P~~v~g~vasSapv~ 230 (288)
+.++..- ..+++++||||||++++.++..+ |+.|.++++.++|+.
T Consensus 133 ~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 133 DTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 6554321 24899999999999998887655 568999998777763
No 88
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.22 E-value=1.8e-05 Score=72.62 Aligned_cols=114 Identities=16% Similarity=0.178 Sum_probs=85.1
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHh--CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRF--GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~--g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
-|+++.|++|-.+.|. .|+..|.+.+ ++.|++..|.||-.+...... ..+-+..+.++-++--..|++.
T Consensus 4 li~~IPGNPGlv~fY~---~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~------~~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 4 LIVFIPGNPGLVEFYE---EFLSALYEKLNPQFEILGISHAGHSTSPSNSKF------SPNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred EEEEECCCCChHHHHH---HHHHHHHHhCCCCCeeEEecCCCCcCCcccccc------cCCCCccCHHHHHHHHHHHHHH
Confidence 3667788898777653 4666777663 789999999999877543211 1245678999888888888888
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcc---cccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP---HIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP---~~v~g~vasSapv 229 (288)
+..+...++.++|++|||.|+.+++.+..++| ..|.++++--+.+
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 77654324679999999999999999999999 6677777644433
No 89
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=3.7e-05 Score=70.99 Aligned_cols=113 Identities=17% Similarity=0.249 Sum_probs=77.1
Q ss_pred cc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
.| ||++||+.++...+..-+| |..+|++.|+.|+++| ++.++.+....-..| .++-+-... +=+.++..++..
T Consensus 61 apLvv~LHG~~~sgag~~~~sg-~d~lAd~~gFlV~yPd--g~~~~wn~~~~~~~~--~p~~~~~g~-ddVgflr~lva~ 134 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTG-WDALADREGFLVAYPD--GYDRAWNANGCGNWF--GPADRRRGV-DDVGFLRALVAK 134 (312)
T ss_pred CCEEEEEecCCCChHHhhcccc-hhhhhcccCcEEECcC--ccccccCCCcccccC--CcccccCCc-cHHHHHHHHHHH
Confidence 35 5668999988876543334 7899999999999995 444443111000000 000001112 235677778888
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEE
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALA 224 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~va 224 (288)
+..+++.+..++.+.|-|-||.++.+++-.||+++.++-.
T Consensus 135 l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~ 174 (312)
T COG3509 135 LVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAP 174 (312)
T ss_pred HHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceee
Confidence 8888888888999999999999999999999999876543
No 90
>PRK10115 protease 2; Provisional
Probab=98.11 E-value=1.1e-05 Score=83.23 Aligned_cols=110 Identities=19% Similarity=0.145 Sum_probs=72.7
Q ss_pred ccEEE-EeCCCCCch-hhhhhcchHHHHHHHhCCEEEeeecccc---ccCCCCCCccccccccccCCccCHHHHHHHHHH
Q 023020 106 GPIFL-YCGNEGDIE-WFAVNSGFVWDIAPRFGAMLVFPEHRYY---GESMPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (288)
Q Consensus 106 ~pI~l-~~Ggeg~~~-~~~~~~~~~~~lA~~~g~~Vi~lEhRgy---G~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~ 180 (288)
.|+++ .|||.+... +.+ ...+..|+. .|+.|+....||- |+.-.... +...=.+...|+..
T Consensus 445 ~P~ll~~hGg~~~~~~p~f--~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g-----------~~~~k~~~~~D~~a 510 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADF--SFSRLSLLD-RGFVYAIVHVRGGGELGQQWYEDG-----------KFLKKKNTFNDYLD 510 (686)
T ss_pred CCEEEEEECCCCCCCCCCc--cHHHHHHHH-CCcEEEEEEcCCCCccCHHHHHhh-----------hhhcCCCcHHHHHH
Confidence 47555 699876543 211 122345555 5999999999984 44321110 00111145677777
Q ss_pred HHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 181 FITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 181 fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.++++..+--.+..++.++|+||||.|++|....+|+++.++|+..+.+
T Consensus 511 ~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 511 ACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred HHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 7777765422345699999999999999999999999999999865444
No 91
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.06 E-value=2.9e-05 Score=74.80 Aligned_cols=108 Identities=22% Similarity=0.228 Sum_probs=75.5
Q ss_pred cc-EEEEeCCCCCch-hhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 106 GP-IFLYCGNEGDIE-WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~-~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.| |+|+||-.|... .|. ..+...|++.|+.|+.+.|||.|.|.-..+. ..+.- -..|+.++++
T Consensus 125 ~P~vvilpGltg~S~~~YV---r~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr-----------~f~ag-~t~Dl~~~v~ 189 (409)
T KOG1838|consen 125 DPIVVILPGLTGGSHESYV---RHLVHEAQRKGYRVVVFNHRGLGGSKLTTPR-----------LFTAG-WTEDLREVVN 189 (409)
T ss_pred CcEEEEecCCCCCChhHHH---HHHHHHHHhCCcEEEEECCCCCCCCccCCCc-----------eeecC-CHHHHHHHHH
Confidence 36 566777655443 332 2244667778999999999999988643331 22211 2479999999
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc--ccceeEEecCccc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH--IAIGALASSAPIL 230 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~--~v~g~vasSapv~ 230 (288)
+++.++. ..|...+|-||||++-.-|.-+--+ .+.|+++.+.|..
T Consensus 190 ~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 190 HIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred HHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 9998864 6799999999999999988755443 2566666677775
No 92
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.04 E-value=5.8e-05 Score=71.67 Aligned_cols=129 Identities=15% Similarity=0.173 Sum_probs=75.8
Q ss_pred cEEEEeCCCCCchhhh----hhcchHHHHHH------HhCCEEEeeeccccc--cCCCCCCccccccccc------cCCc
Q 023020 107 PIFLYCGNEGDIEWFA----VNSGFVWDIAP------RFGAMLVFPEHRYYG--ESMPYGSTEVAYQNAT------TLSY 168 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~----~~~~~~~~lA~------~~g~~Vi~lEhRgyG--~S~P~~~~~~~~~~~~------~l~y 168 (288)
.|+++|+--|+..... ...|+|..+.- -..+-||..+--|.+ .|.|... ..+ ..--
T Consensus 53 aVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~------~p~g~~yg~~FP~ 126 (368)
T COG2021 53 AVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI------NPGGKPYGSDFPV 126 (368)
T ss_pred eEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc------CCCCCccccCCCc
Confidence 4667787666443111 12256665542 125789999999875 4445332 111 1123
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCCCCCCE-EEeecChhHHHHHHHHHhcccccceeEEecCccccccCCCChhhHHHHHHH
Q 023020 169 LTAEQALADFAVFITNLKQNLSAEASPV-VLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSS 247 (288)
Q Consensus 169 lt~~qal~Dl~~fi~~l~~~~~~~~~~~-il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~~~~~~~~~~y~~~v~~ 247 (288)
+|+++.+.-...+++++.. .++ .++|+|||||.|...+..|||.|..++..++..... ..--.|.++.++
T Consensus 127 ~ti~D~V~aq~~ll~~LGI------~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s---~~~ia~~~~~r~ 197 (368)
T COG2021 127 ITIRDMVRAQRLLLDALGI------KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLS---AQNIAFNEVQRQ 197 (368)
T ss_pred ccHHHHHHHHHHHHHhcCc------ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCC---HHHHHHHHHHHH
Confidence 4666555554555555543 244 589999999999999999999998776544333321 112345555556
Q ss_pred Hhh
Q 023020 248 DFK 250 (288)
Q Consensus 248 ~~~ 250 (288)
++.
T Consensus 198 AI~ 200 (368)
T COG2021 198 AIE 200 (368)
T ss_pred HHH
Confidence 554
No 93
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.96 E-value=6.9e-05 Score=70.56 Aligned_cols=83 Identities=22% Similarity=0.306 Sum_probs=58.8
Q ss_pred chHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhH
Q 023020 126 GFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGG 205 (288)
Q Consensus 126 ~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG 205 (288)
|.+..-+ +.|+.|+.+.|+||+.|.-.+-. .+...|++-+.+|. .+.++.....+|++|.|.||
T Consensus 259 G~m~tP~-~lgYsvLGwNhPGFagSTG~P~p------------~n~~nA~DaVvQfA---I~~Lgf~~edIilygWSIGG 322 (517)
T KOG1553|consen 259 GVMNTPA-QLGYSVLGWNHPGFAGSTGLPYP------------VNTLNAADAVVQFA---IQVLGFRQEDIILYGWSIGG 322 (517)
T ss_pred eeecChH-HhCceeeccCCCCccccCCCCCc------------ccchHHHHHHHHHH---HHHcCCCccceEEEEeecCC
Confidence 4444334 46999999999999999622210 11223444444443 33445556789999999999
Q ss_pred HHHHHHHHhcccccceeEEe
Q 023020 206 MLAAWMRLKYPHIAIGALAS 225 (288)
Q Consensus 206 ~lAa~~~~kyP~~v~g~vas 225 (288)
.-++|.+..||+ |+|+|+.
T Consensus 323 F~~~waAs~YPd-VkavvLD 341 (517)
T KOG1553|consen 323 FPVAWAASNYPD-VKAVVLD 341 (517)
T ss_pred chHHHHhhcCCC-ceEEEee
Confidence 999999999998 8898884
No 94
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.96 E-value=3.4e-05 Score=75.66 Aligned_cols=85 Identities=12% Similarity=0.128 Sum_probs=63.3
Q ss_pred HHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHH
Q 023020 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (288)
Q Consensus 128 ~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~l 207 (288)
+..|++ .|+ +...|++|+|.+..... ..++.+++++.+++.+....+ ..|++++||||||.+
T Consensus 114 i~~L~~-~GY-~~~~dL~g~gYDwR~~~--------------~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlv 175 (440)
T PLN02733 114 IEQLIK-WGY-KEGKTLFGFGYDFRQSN--------------RLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLL 175 (440)
T ss_pred HHHHHH-cCC-ccCCCcccCCCCccccc--------------cHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHH
Confidence 334443 465 45889999998853211 246678899999988876543 469999999999999
Q ss_pred HHHHHHhcccc----cceeEEecCccc
Q 023020 208 AAWMRLKYPHI----AIGALASSAPIL 230 (288)
Q Consensus 208 Aa~~~~kyP~~----v~g~vasSapv~ 230 (288)
+..+...+|+. |...|+.++|..
T Consensus 176 a~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 176 VKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 99999999974 566677677765
No 95
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.96 E-value=0.00011 Score=72.45 Aligned_cols=84 Identities=15% Similarity=0.163 Sum_probs=58.8
Q ss_pred CCEEEeeec-cccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEeecChhHHHHHHHHH
Q 023020 136 GAMLVFPEH-RYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 136 g~~Vi~lEh-RgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~-~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
.+.|+.+|+ +|+|.|..... + ...+.+++.+|+.+|++.+.+++. ..+.|++++|+||||..+..++.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~---------~-~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA---------D-YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC---------C-CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 468999995 79999963211 1 123568999999999998766543 24579999999999998876664
Q ss_pred hc---c-------cccceeEEecCcc
Q 023020 214 KY---P-------HIAIGALASSAPI 229 (288)
Q Consensus 214 ky---P-------~~v~g~vasSapv 229 (288)
+- . =.++|+++..+-+
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHhhccccCCceeeeEEEEEecccc
Confidence 42 1 1367777655544
No 96
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.95 E-value=7.5e-05 Score=69.29 Aligned_cols=105 Identities=22% Similarity=0.255 Sum_probs=68.6
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
..||++|||......-..+......++...|+.|+.+|+|---+- ++ ..++.|+..-++.+
T Consensus 80 p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~------------------p~~~~d~~~a~~~l 140 (312)
T COG0657 80 PVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-PF------------------PAALEDAYAAYRWL 140 (312)
T ss_pred cEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-CC------------------CchHHHHHHHHHHH
Confidence 346667998765443323334567888889999999999954332 11 23555555555555
Q ss_pred HH---hcCCCCCCEEEeecChhHHHHHHHHHhccc----ccceeEEecCcc
Q 023020 186 KQ---NLSAEASPVVLFGGSYGGMLAAWMRLKYPH----IAIGALASSAPI 229 (288)
Q Consensus 186 ~~---~~~~~~~~~il~G~SyGG~lAa~~~~kyP~----~v~g~vasSapv 229 (288)
.. +++.+..+++++|+|-||.||+.+.+.-.+ ...+.++.++.+
T Consensus 141 ~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 141 RANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred HhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 43 355566799999999999999998866443 345555555433
No 97
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.92 E-value=0.00018 Score=64.09 Aligned_cols=49 Identities=22% Similarity=0.340 Sum_probs=39.2
Q ss_pred HHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 180 VFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 180 ~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+++..+..+++....++.+.|+||||..|++++.+||+.+.++++.|+.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 4455555666543344999999999999999999999999999988854
No 98
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=97.88 E-value=2.2e-05 Score=75.85 Aligned_cols=110 Identities=18% Similarity=0.169 Sum_probs=64.2
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
..|+|++.||........ ...+.+.....|..++.+|.+|-|.|...+ + + ++ +-...|++ ++.
T Consensus 189 p~P~VIv~gGlDs~qeD~--~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l-----~-~D--~~~l~~aV------Ld~ 251 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDL--YRLFRDYLAPRGIAMLTVDMPGQGESPKWP-L-----T-QD--SSRLHQAV------LDY 251 (411)
T ss_dssp -EEEEEEE--TTS-GGGG--HHHHHCCCHHCT-EEEEE--TTSGGGTTT--S-------S---CCHHHHHH------HHH
T ss_pred CCCEEEEeCCcchhHHHH--HHHHHHHHHhCCCEEEEEccCCCcccccCC-C-----C-cC--HHHHHHHH------HHH
Confidence 468999999976654211 122333333469999999999999985322 1 1 11 11122333 444
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~ 231 (288)
+...--.+..++.++|-|+||.+|..++...++.++|+|+.+|++..
T Consensus 252 L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 252 LASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH 298 (411)
T ss_dssp HHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SC
T ss_pred HhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhh
Confidence 44322223458999999999999999999999999999998888753
No 99
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.87 E-value=9.1e-05 Score=80.81 Aligned_cols=96 Identities=11% Similarity=-0.024 Sum_probs=71.5
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHh--CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRF--GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~--g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
+.|+|++||..|.... +..+++.+ ++.|+.++.+|+|.+.+. ..++++.++|+...+
T Consensus 1068 ~~~l~~lh~~~g~~~~-------~~~l~~~l~~~~~v~~~~~~g~~~~~~~--------------~~~l~~la~~~~~~i 1126 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-------FSVLSRYLDPQWSIYGIQSPRPDGPMQT--------------ATSLDEVCEAHLATL 1126 (1296)
T ss_pred CCCeEEecCCCCchHH-------HHHHHHhcCCCCcEEEEECCCCCCCCCC--------------CCCHHHHHHHHHHHH
Confidence 3689999998876543 23444433 678999999999876431 236888999988888
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHh---cccccceeEEec
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK---YPHIAIGALASS 226 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k---yP~~v~g~vasS 226 (288)
+.+. ...|++++||||||.+|..++.+ .|+.+..+++..
T Consensus 1127 ~~~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~ 1168 (1296)
T PRK10252 1127 LEQQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLD 1168 (1296)
T ss_pred HhhC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEec
Confidence 7542 13589999999999999999885 577788877654
No 100
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.85 E-value=0.00033 Score=64.55 Aligned_cols=102 Identities=20% Similarity=0.298 Sum_probs=72.7
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
-++||=+||-+|+-..| -.+...-.+.|.++|.+..+|+|.+....+ +.|-..| -..|...
T Consensus 35 ~gTVv~~hGsPGSH~DF----kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~----------~~~~n~e-----r~~~~~~ 95 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDF----KYIRPPLDEAGIRFIGINYPGFGFTPGYPD----------QQYTNEE-----RQNFVNA 95 (297)
T ss_pred ceeEEEecCCCCCccch----hhhhhHHHHcCeEEEEeCCCCCCCCCCCcc----------cccChHH-----HHHHHHH
Confidence 45688899999876554 234555667799999999999999864333 2343322 2345555
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+-.+++.. .+++.+|||.|+-.|+.++...| ..|+++.++|
T Consensus 96 ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 96 LLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred HHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 54444433 58999999999999999999997 5688776654
No 101
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.83 E-value=5.1e-05 Score=67.82 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=49.0
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCE---EEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAM---LVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~---Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
.||||+||..++...-| ..+...|. +.|+. |++++.-....+. .. .+.. .+ .+.++.++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w--~~~~~~l~-~~GY~~~~vya~tyg~~~~~~---~~-------~~~~-~~-~~~~~~l~~fI 66 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNW--STLAPYLK-AAGYCDSEVYALTYGSGNGSP---SV-------QNAH-MS-CESAKQLRAFI 66 (219)
T ss_dssp --EEEE--TTTTTCGGC--CHHHHHHH-HTT--CCCEEEE--S-CCHHT---HH-------HHHH-B--HHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCH--HHHHHHHH-HcCCCcceeEeccCCCCCCCC---cc-------cccc-cc-hhhHHHHHHHH
Confidence 69999999876332211 22333444 45777 7887753222211 10 0001 12 34458999999
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ky 215 (288)
+.+...- ..||-++|||+||+++.|+.+..
T Consensus 67 ~~Vl~~T---GakVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 67 DAVLAYT---GAKVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHH---T--EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHhh---CCEEEEEEcCCcCHHHHHHHHHc
Confidence 9987543 34999999999999999997644
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.83 E-value=7.2e-05 Score=68.25 Aligned_cols=85 Identities=20% Similarity=0.124 Sum_probs=62.6
Q ss_pred HHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHH
Q 023020 131 IAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAW 210 (288)
Q Consensus 131 lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~ 210 (288)
++ +.||.||..|.||.|.|. +.. ... .++-..|....|+.+..+ .-.+.+|-++|.||+|..+..
T Consensus 53 ~~-~~GY~vV~~D~RG~g~S~--G~~----------~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~ 117 (272)
T PF02129_consen 53 FA-ERGYAVVVQDVRGTGGSE--GEF----------DPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWA 117 (272)
T ss_dssp HH-HTT-EEEEEE-TTSTTS---S-B-----------TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHH
T ss_pred HH-hCCCEEEEECCcccccCC--Ccc----------ccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHH
Confidence 44 469999999999999995 321 111 567788999999999876 334458999999999999999
Q ss_pred HHHhcccccceeEEecCccc
Q 023020 211 MRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 211 ~~~kyP~~v~g~vasSapv~ 230 (288)
.+..-|..+++++..+++.-
T Consensus 118 ~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 118 AAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHTTT-TTEEEEEEESE-SB
T ss_pred HHhcCCCCceEEEecccCCc
Confidence 99977777899887665554
No 103
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.79 E-value=0.00011 Score=65.30 Aligned_cols=107 Identities=17% Similarity=0.117 Sum_probs=71.6
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
...++|.||.......... ..+...+ ++.|+.++-+|-||-|+|.- .. .|-...--++|+..++++
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~-~~vA~~~-e~~gis~fRfDF~GnGeS~g--sf----------~~Gn~~~eadDL~sV~q~ 98 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIM-KNVAKAL-EKEGISAFRFDFSGNGESEG--SF----------YYGNYNTEADDLHSVIQY 98 (269)
T ss_pred ceEEEEeeccccccchHHH-HHHHHHH-HhcCceEEEEEecCCCCcCC--cc----------ccCcccchHHHHHHHHHH
Confidence 3678899998765543211 1112222 24699999999999999962 11 111111233999999999
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+.... ..--+++|||-||.++..++.||++ +.-+|..|+-.
T Consensus 99 ~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRy 139 (269)
T KOG4667|consen 99 FSNSN---RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRY 139 (269)
T ss_pred hccCc---eEEEEEEeecCccHHHHHHHHhhcC-chheEEccccc
Confidence 87521 1234789999999999999999998 55566555543
No 104
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.72 E-value=0.00014 Score=73.18 Aligned_cols=117 Identities=23% Similarity=0.301 Sum_probs=72.7
Q ss_pred CCCccEEE-EeCCCCCch---hh-hhhcchHHHHHHHhCCEEEeeeccccccCC-CCCCccccccccccCCccCHHHHHH
Q 023020 103 NRLGPIFL-YCGNEGDIE---WF-AVNSGFVWDIAPRFGAMLVFPEHRYYGESM-PYGSTEVAYQNATTLSYLTAEQALA 176 (288)
Q Consensus 103 ~~~~pI~l-~~Ggeg~~~---~~-~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~-P~~~~~~~~~~~~~l~ylt~~qal~ 176 (288)
+++-|.++ +-||++--. .| +...=.+..|| ..|+.|+.+|-||--.-- .+... -..++++..+++-+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~La-slGy~Vv~IDnRGS~hRGlkFE~~-----ik~kmGqVE~eDQVe 712 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLA-SLGYVVVFIDNRGSAHRGLKFESH-----IKKKMGQVEVEDQVE 712 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhh-hcceEEEEEcCCCccccchhhHHH-----HhhccCeeeehhhHH
Confidence 34456544 568775311 11 11111123445 469999999999864321 11110 123556666665555
Q ss_pred HHHHHHHHHHHhcCC-CCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 177 DFAVFITNLKQNLSA-EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~-~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
-+. .+..+++. +-.++.+-|.||||.|++....+||+.+..+|+ .|||.
T Consensus 713 glq----~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA-GapVT 762 (867)
T KOG2281|consen 713 GLQ----MLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA-GAPVT 762 (867)
T ss_pred HHH----HHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEec-cCcce
Confidence 544 44444432 335899999999999999999999999999998 78885
No 105
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.69 E-value=0.00025 Score=66.84 Aligned_cols=115 Identities=18% Similarity=0.105 Sum_probs=65.0
Q ss_pred cc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecccccc-CCCCCCcc----ccc--ccccc-CCccCHHHHHH
Q 023020 106 GP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGE-SMPYGSTE----VAY--QNATT-LSYLTAEQALA 176 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~-S~P~~~~~----~~~--~~~~~-l~ylt~~qal~ 176 (288)
-| ||.+||..+....+.. ...+| ..|+.|+.+|-||.|. |....... ..+ ...++ ..-+-...++.
T Consensus 83 ~Pavv~~hGyg~~~~~~~~----~~~~a-~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~ 157 (320)
T PF05448_consen 83 LPAVVQFHGYGGRSGDPFD----LLPWA-AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYL 157 (320)
T ss_dssp EEEEEEE--TT--GGGHHH----HHHHH-HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHH
T ss_pred cCEEEEecCCCCCCCCccc----ccccc-cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHH
Confidence 45 5667987665332211 12345 3599999999999993 32111000 000 00111 11112456778
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
|+..-++.+......+..++.+.|+|.||.++++.+...|. |.++++..
T Consensus 158 D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~v 206 (320)
T PF05448_consen 158 DAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADV 206 (320)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEES
T ss_pred HHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecC
Confidence 99888888886433345689999999999999999999986 88887754
No 106
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.69 E-value=6.9e-05 Score=65.78 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=67.8
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccC-CCCCCccccccccccCCcc---CHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGES-MPYGSTEVAYQNATTLSYL---TAEQALADFAVF 181 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S-~P~~~~~~~~~~~~~l~yl---t~~qal~Dl~~f 181 (288)
..||++|+-.|-... ...+...||+ .|+.|+++|. |+|.. .|.... . ....+..+ ..++..+|+...
T Consensus 15 ~~Vvv~~d~~G~~~~---~~~~ad~lA~-~Gy~v~~pD~-f~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~aa 85 (218)
T PF01738_consen 15 PAVVVIHDIFGLNPN---IRDLADRLAE-EGYVVLAPDL-FGGRGAPPSDPE-E---AFAAMRELFAPRPEQVAADLQAA 85 (218)
T ss_dssp EEEEEE-BTTBS-HH---HHHHHHHHHH-TT-EEEEE-C-CCCTS--CCCHH-C---HHHHHHHCHHHSHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCchH---HHHHHHHHHh-cCCCEEeccc-ccCCCCCccchh-h---HHHHHHHHHhhhHHHHHHHHHHH
Confidence 447888876553321 1233456665 4999999997 44444 232211 0 01111111 156788999899
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
++.++.+......++.++|.|+||.+|..++... ..++++++.-+
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 9999875433346999999999999999998887 55788776544
No 107
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.63 E-value=0.00096 Score=63.24 Aligned_cols=140 Identities=19% Similarity=0.319 Sum_probs=93.9
Q ss_pred cceeeEEEeecCCCC----CCCCCeEEEEEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcch-HHHHHHHhCCEEEe
Q 023020 67 RYETRYFEQRLDHFS----FADLPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGF-VWDIAPRFGAMLVF 141 (288)
Q Consensus 67 ~~~~~~f~Q~lDHf~----~~~~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~-~~~lA~~~g~~Vi~ 141 (288)
...++.|+-|+++.- |...++=.-++..- +-|.. +.+||.+...|-|+.. |+--..+ ...|+++ |..-+.
T Consensus 52 ~~~eG~F~SP~~~~~~~~lP~es~~a~~~~~~P-~~~~~--~~rp~~IhLagTGDh~-f~rR~~l~a~pLl~~-gi~s~~ 126 (348)
T PF09752_consen 52 KIREGEFRSPLAFYLPGLLPEESRTARFQLLLP-KRWDS--PYRPVCIHLAGTGDHG-FWRRRRLMARPLLKE-GIASLI 126 (348)
T ss_pred EEEEeEeCCchhhhccccCChhHhheEEEEEEC-Ccccc--CCCceEEEecCCCccc-hhhhhhhhhhHHHHc-CcceEE
Confidence 466899999977653 33223322223332 33532 3478877766676644 3322233 4577777 999999
Q ss_pred eeccccccCCCCCCccccccccccCCccC-----HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 142 PEHRYYGESMPYGSTEVAYQNATTLSYLT-----AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 142 lEhRgyG~S~P~~~~~~~~~~~~~l~ylt-----~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
+|.+|||.=+|.... ...+...+ ..+.+.+...++..++.+ + ..|+.+.|-||||.+|+..+..+|
T Consensus 127 le~Pyyg~RkP~~Q~------~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p 197 (348)
T PF09752_consen 127 LENPYYGQRKPKDQR------RSSLRNVSDLFVMGRATILESRALLHWLERE-G--YGPLGLTGISMGGHMAALAASNWP 197 (348)
T ss_pred EecccccccChhHhh------cccccchhHHHHHHhHHHHHHHHHHHHHHhc-C--CCceEEEEechhHhhHHhhhhcCC
Confidence 999999998885432 12222222 256778888888888876 3 359999999999999999999999
Q ss_pred cccc
Q 023020 217 HIAI 220 (288)
Q Consensus 217 ~~v~ 220 (288)
..+.
T Consensus 198 ~pv~ 201 (348)
T PF09752_consen 198 RPVA 201 (348)
T ss_pred Ccee
Confidence 8654
No 108
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=97.62 E-value=4e-05 Score=67.46 Aligned_cols=104 Identities=16% Similarity=0.105 Sum_probs=68.8
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
..|+++.|.-|+...-+- --+..+-+.....||++|-||||.|.|... -...+-...|..+-++-+
T Consensus 43 ~~iLlipGalGs~~tDf~--pql~~l~k~l~~TivawDPpGYG~SrPP~R------------kf~~~ff~~Da~~avdLM 108 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFP--PQLLSLFKPLQVTIVAWDPPGYGTSRPPER------------KFEVQFFMKDAEYAVDLM 108 (277)
T ss_pred ceeEecccccccccccCC--HHHHhcCCCCceEEEEECCCCCCCCCCCcc------------cchHHHHHHhHHHHHHHH
Confidence 357888887776542110 012233333457899999999999997432 233444555555544444
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
+. .+-.|+.++|.|-||..|...+.|+|+.|+.++.-.
T Consensus 109 ~a---Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwg 146 (277)
T KOG2984|consen 109 EA---LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWG 146 (277)
T ss_pred HH---hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeec
Confidence 32 113589999999999999999999999998776543
No 109
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.58 E-value=0.00044 Score=69.46 Aligned_cols=108 Identities=9% Similarity=-0.004 Sum_probs=77.0
Q ss_pred CccEEEEeCCCC--CchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEG--DIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 105 ~~pI~l~~Ggeg--~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
+.||+|+.+--. -+-......+++..+. +.|..|+++|.|.=|.+ .+.+++++.+..+...+
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv-~qG~~VflIsW~nP~~~---------------~r~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCL-KNQLQVFIISWRNPDKA---------------HREWGLSTYVDALKEAV 278 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHH-HcCCeEEEEeCCCCChh---------------hcCCCHHHHHHHHHHHH
Confidence 468999886321 0001111234444444 46999999999884433 15688899998888888
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHH----HHHhccc-ccceeEEecCccc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAW----MRLKYPH-IAIGALASSAPIL 230 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~----~~~kyP~-~v~g~vasSapv~ 230 (288)
+.++...+ ..++.++|+|+||.+++. ++.++|+ .|..+++..+|+-
T Consensus 279 d~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 279 DAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred HHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 88876533 358999999999999986 8899996 7999998788885
No 110
>COG0400 Predicted esterase [General function prediction only]
Probab=97.58 E-value=0.0003 Score=62.33 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecC
Q 023020 173 QALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 173 qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
.....+++|++.+..+++.+..++|++|.|-|+++++....++|+.+.++++.|+
T Consensus 78 ~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g 132 (207)
T COG0400 78 LETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG 132 (207)
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCC
Confidence 3444555666666677777778999999999999999999999999999998664
No 111
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.55 E-value=0.00094 Score=63.37 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=85.8
Q ss_pred eEEEeecCCCCCCCCCeEEEEEEEeccccCCCCCCcc-EEEEeCCCCCchh--hhhhcchHHHHHHHhCCEEEeeecccc
Q 023020 71 RYFEQRLDHFSFADLPTFSQRYLINTDHWVGPNRLGP-IFLYCGNEGDIEW--FAVNSGFVWDIAPRFGAMLVFPEHRYY 147 (288)
Q Consensus 71 ~~f~Q~lDHf~~~~~~tf~qry~~~~~~~~~~~~~~p-I~l~~Ggeg~~~~--~~~~~~~~~~lA~~~g~~Vi~lEhRgy 147 (288)
...+..++.++.-.-+.|....-... .+-| ||++|||+..... ...+.++...+|.+.++.|+.+|+|==
T Consensus 62 ~~~dv~~~~~~~l~vRly~P~~~~~~-------~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA 134 (336)
T KOG1515|consen 62 TSKDVTIDPFTNLPVRLYRPTSSSSE-------TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA 134 (336)
T ss_pred eeeeeEecCCCCeEEEEEcCCCCCcc-------cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC
Confidence 34566677766553344443331111 2345 6778999876542 222345677899999999999999943
Q ss_pred ccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhc------ccccce
Q 023020 148 GESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY------PHIAIG 221 (288)
Q Consensus 148 G~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ky------P~~v~g 221 (288)
=+. |++. ..++.++-+..|.++.-.++..+-.++++.|-|-||.||..++++- +-.+.|
T Consensus 135 PEh-~~Pa--------------~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g 199 (336)
T KOG1515|consen 135 PEH-PFPA--------------AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKG 199 (336)
T ss_pred CCC-CCCc--------------cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEE
Confidence 222 1221 2455666666666642223344456899999999999998887552 356889
Q ss_pred eEEecCcccc
Q 023020 222 ALASSAPILQ 231 (288)
Q Consensus 222 ~vasSapv~~ 231 (288)
.|+..+-+..
T Consensus 200 ~ili~P~~~~ 209 (336)
T KOG1515|consen 200 QILIYPFFQG 209 (336)
T ss_pred EEEEecccCC
Confidence 9986654443
No 112
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.52 E-value=0.00078 Score=60.75 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=73.1
Q ss_pred c-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccc-cccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 107 P-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRY-YGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 107 p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRg-yG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
| ||++|+-.|-.. .. ..+...+|+ .|+.|+++|.-+ .|.+.+..+........ ...-.+..+.+.|+...++.
T Consensus 28 P~VIv~hei~Gl~~-~i--~~~a~rlA~-~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~a~~~~ 102 (236)
T COG0412 28 PGVIVLHEIFGLNP-HI--RDVARRLAK-AGYVVLAPDLYGRQGDPTDIEDEPAELETG-LVERVDPAEVLADIDAALDY 102 (236)
T ss_pred CEEEEEecccCCch-HH--HHHHHHHHh-CCcEEEechhhccCCCCCcccccHHHHhhh-hhccCCHHHHHHHHHHHHHH
Confidence 5 666787544222 11 123345554 499999999876 46655433210000000 00123348999999999999
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEe
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALAS 225 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vas 225 (288)
+..+......++.++|.||||.++..++.+.| .|+++++-
T Consensus 103 L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~f 142 (236)
T COG0412 103 LARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAF 142 (236)
T ss_pred HHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEe
Confidence 98764334468999999999999999999998 57777764
No 113
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.46 E-value=0.0028 Score=59.14 Aligned_cols=110 Identities=19% Similarity=0.175 Sum_probs=65.1
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHH---hCCEEEeeeccc-cccCCCCCCccccccccccCCccCHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPR---FGAMLVFPEHRY-YGESMPYGSTEVAYQNATTLSYLTAEQALADFAVF 181 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~---~g~~Vi~lEhRg-yG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~f 181 (288)
..++++.||-++.-- ...+...||+. .++.|+-+..+- |+ -+++-+.++=++|+..+
T Consensus 33 ~~~llfIGGLtDGl~---tvpY~~~La~aL~~~~wsl~q~~LsSSy~----------------G~G~~SL~~D~~eI~~~ 93 (303)
T PF08538_consen 33 PNALLFIGGLTDGLL---TVPYLPDLAEALEETGWSLFQVQLSSSYS----------------GWGTSSLDRDVEEIAQL 93 (303)
T ss_dssp SSEEEEE--TT--TT----STCHHHHHHHHT-TT-EEEEE--GGGBT----------------TS-S--HHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCC---CCchHHHHHHHhccCCeEEEEEEecCccC----------------CcCcchhhhHHHHHHHH
Confidence 447888888765321 11234556554 488999888763 21 12334678889999999
Q ss_pred HHHHHHhcC--CCCCCEEEeecChhHHHHHHHHHhcc-----cccceeEEecCccccccCC
Q 023020 182 ITNLKQNLS--AEASPVVLFGGSYGGMLAAWMRLKYP-----HIAIGALASSAPILQFEDI 235 (288)
Q Consensus 182 i~~l~~~~~--~~~~~~il~G~SyGG~lAa~~~~kyP-----~~v~g~vasSapv~~~~~~ 235 (288)
+++++..-. ....+++|+|||-|-.-++.|..+.. ..|+|+|+ -|||.-.+.+
T Consensus 94 v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~IL-QApVSDREa~ 153 (303)
T PF08538_consen 94 VEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAIL-QAPVSDREAI 153 (303)
T ss_dssp HHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEE-EEE---TTST
T ss_pred HHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEE-eCCCCChhHh
Confidence 999987521 13469999999999999999987653 56999999 6788644443
No 114
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.44 E-value=0.00052 Score=62.78 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=64.3
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
|+|++|+..|....|. .+...+.. -..|+.++-|++|.-.+ ..-+.+++++.+..-|+.+.
T Consensus 2 pLF~fhp~~G~~~~~~---~L~~~l~~--~~~v~~l~a~g~~~~~~--------------~~~~l~~~a~~yv~~Ir~~Q 62 (257)
T COG3319 2 PLFCFHPAGGSVLAYA---PLAAALGP--LLPVYGLQAPGYGAGEQ--------------PFASLDDMAAAYVAAIRRVQ 62 (257)
T ss_pred CEEEEcCCCCcHHHHH---HHHHHhcc--CceeeccccCccccccc--------------ccCCHHHHHHHHHHHHHHhC
Confidence 7999999888765442 22223332 25689999999985221 12367888877776666542
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHHh---cccccceeEEec
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRLK---YPHIAIGALASS 226 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~k---yP~~v~g~vasS 226 (288)
+..|++|.|+|+||.+|.-.+.+ --+.|.-+++.-
T Consensus 63 -----P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD 100 (257)
T COG3319 63 -----PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLD 100 (257)
T ss_pred -----CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEec
Confidence 35699999999999999887755 334566555543
No 115
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.43 E-value=0.00084 Score=62.30 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=38.2
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
.+...++.+.+++.++|.|+||+-+..+..||||.+.|++..+
T Consensus 259 vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ia 301 (387)
T COG4099 259 VLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIA 301 (387)
T ss_pred HHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeec
Confidence 4556788888899999999999999999999999999998765
No 116
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.42 E-value=0.00047 Score=67.96 Aligned_cols=110 Identities=17% Similarity=0.108 Sum_probs=68.7
Q ss_pred CccE-EEEeCCCCCchhhhhhcchHHHHHHHhC-CEEEeeecc----ccccCCCCCCccccccccccCCccCHHHHHHHH
Q 023020 105 LGPI-FLYCGNEGDIEWFAVNSGFVWDIAPRFG-AMLVFPEHR----YYGESMPYGSTEVAYQNATTLSYLTAEQALADF 178 (288)
Q Consensus 105 ~~pI-~l~~Ggeg~~~~~~~~~~~~~~lA~~~g-~~Vi~lEhR----gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl 178 (288)
+.|| |++|||......... .....++.+.+ ..||.+++| ||+.+. ... ..-...+.|.
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~--~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~-~~~-------------~~~n~g~~D~ 157 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSL--YPGDGLAREGDNVIVVSINYRLGVLGFLSTG-DIE-------------LPGNYGLKDQ 157 (493)
T ss_pred CCCEEEEEcCCccccCCCCC--CChHHHHhcCCCEEEEEecccccccccccCC-CCC-------------CCcchhHHHH
Confidence 4575 557888532221101 12345666555 899999999 333221 111 1112356677
Q ss_pred HHHHHHHHHh---cCCCCCCEEEeecChhHHHHHHHHHh--cccccceeEEecCccc
Q 023020 179 AVFITNLKQN---LSAEASPVVLFGGSYGGMLAAWMRLK--YPHIAIGALASSAPIL 230 (288)
Q Consensus 179 ~~fi~~l~~~---~~~~~~~~il~G~SyGG~lAa~~~~k--yP~~v~g~vasSapv~ 230 (288)
...++.++.. ++.+..+++++|+|.||.++.++... .+.+++++|+.|++..
T Consensus 158 ~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 158 RLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 7666666643 44556799999999999999988776 4568999998776554
No 117
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.38 E-value=0.0014 Score=56.33 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHH-HhcccccceeEEecCccc
Q 023020 178 FAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR-LKYPHIAIGALASSAPIL 230 (288)
Q Consensus 178 l~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~-~kyP~~v~g~vasSapv~ 230 (288)
+...++.+.......+.+++++|||.|...++.+. ...+..|.|+++.+++-.
T Consensus 39 ~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 39 LDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 34455556555444456899999999999999999 888889999999776643
No 118
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.33 E-value=0.0014 Score=68.66 Aligned_cols=81 Identities=17% Similarity=0.048 Sum_probs=61.4
Q ss_pred HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCC--------------CCCCEEEe
Q 023020 134 RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA--------------EASPVVLF 199 (288)
Q Consensus 134 ~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~--------------~~~~~il~ 199 (288)
..|+.|+..|.||.|.|.-... .. ..+-..|....|+.+..+... .+.++-++
T Consensus 277 ~rGYaVV~~D~RGtg~SeG~~~------------~~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~ 343 (767)
T PRK05371 277 PRGFAVVYVSGIGTRGSDGCPT------------TG-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMT 343 (767)
T ss_pred hCCeEEEEEcCCCCCCCCCcCc------------cC-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEE
Confidence 4599999999999999963111 11 145667888888888743110 24699999
Q ss_pred ecChhHHHHHHHHHhcccccceeEEecC
Q 023020 200 GGSYGGMLAAWMRLKYPHIAIGALASSA 227 (288)
Q Consensus 200 G~SyGG~lAa~~~~kyP~~v~g~vasSa 227 (288)
|.||||.++.+.+...|..++++|..++
T Consensus 344 G~SY~G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 344 GKSYLGTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred EEcHHHHHHHHHHhhCCCcceEEEeeCC
Confidence 9999999999999999988999887543
No 119
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.29 E-value=0.0034 Score=60.67 Aligned_cols=54 Identities=26% Similarity=0.343 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhcCCC--CCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 177 DFAVFITNLKQNLSAE--ASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~--~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
|+...+.++++.+... +.|+|++|+||||.||...+.--|..|++++=-|+.+.
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 4444444555444322 25999999999999999999999999999996555443
No 120
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.29 E-value=0.0011 Score=59.65 Aligned_cols=73 Identities=26% Similarity=0.399 Sum_probs=55.6
Q ss_pred HHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHH
Q 023020 130 DIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAA 209 (288)
Q Consensus 130 ~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa 209 (288)
..|.+.|+.|..+|+||-|+|.|... +...++|+ +-+-.|+...+..+++.. +..|...+||||||.+.-
T Consensus 51 ~~a~~~Gf~Vlt~dyRG~g~S~p~~~------~~~~~~~~--DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~g 120 (281)
T COG4757 51 AAAAKAGFEVLTFDYRGIGQSRPASL------SGSQWRYL--DWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALG 120 (281)
T ss_pred HHhhccCceEEEEecccccCCCcccc------ccCccchh--hhhhcchHHHHHHHHhhC--CCCceEEeeccccceeec
Confidence 45556799999999999999998654 33445554 567788888888887643 467999999999998765
Q ss_pred HHH
Q 023020 210 WMR 212 (288)
Q Consensus 210 ~~~ 212 (288)
.+.
T Consensus 121 L~~ 123 (281)
T COG4757 121 LLG 123 (281)
T ss_pred ccc
Confidence 443
No 121
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.28 E-value=0.0022 Score=61.41 Aligned_cols=86 Identities=21% Similarity=0.199 Sum_probs=57.5
Q ss_pred CCEEEeeecc-ccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCC-CCCCEEEeecChhHHHHHHHH-
Q 023020 136 GAMLVFPEHR-YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA-EASPVVLFGGSYGGMLAAWMR- 212 (288)
Q Consensus 136 g~~Vi~lEhR-gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~-~~~~~il~G~SyGG~lAa~~~- 212 (288)
.+.|+.+|++ |.|-|..... +....+.+++..|+..|++..-.++.. ...|+.|+|-||||..+..++
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~---------~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDP---------SDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp TSEEEEE--STTSTT-EESSG---------GGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred ccceEEEeecCceEEeecccc---------ccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 5799999966 8999964222 113457899999999999988766542 445999999999998765544
Q ss_pred ---Hhc------ccccceeEEecCccc
Q 023020 213 ---LKY------PHIAIGALASSAPIL 230 (288)
Q Consensus 213 ---~ky------P~~v~g~vasSapv~ 230 (288)
... +=.++|+++.++-+.
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred hhhhccccccccccccccceecCcccc
Confidence 223 223778887665543
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.20 E-value=0.0027 Score=56.22 Aligned_cols=102 Identities=19% Similarity=0.083 Sum_probs=66.8
Q ss_pred CccE-EEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 105 LGPI-FLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 105 ~~pI-~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
..|+ +|+|||-+.......-. -+...|.+.|+.|... |||.+. +-.|.+|.+.|..++++
T Consensus 66 ~~klfIfIHGGYW~~g~rk~cl-siv~~a~~~gY~vasv---gY~l~~---------------q~htL~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCL-SIVGPAVRRGYRVASV---GYNLCP---------------QVHTLEQTMTQFTHGVN 126 (270)
T ss_pred CccEEEEEecchhhcCchhccc-chhhhhhhcCeEEEEe---ccCcCc---------------ccccHHHHHHHHHHHHH
Confidence 3555 55799865443211111 1345666779988876 466663 12478899999999988
Q ss_pred HHHHhcCCCCCCEE-EeecChhHHHHHHH--HHhcccccceeEEecCc
Q 023020 184 NLKQNLSAEASPVV-LFGGSYGGMLAAWM--RLKYPHIAIGALASSAP 228 (288)
Q Consensus 184 ~l~~~~~~~~~~~i-l~G~SyGG~lAa~~--~~kyP~~v~g~vasSap 228 (288)
.+-+.+. +.+.+ +-|||-|.-||+.. |++.| .|+|++++++.
T Consensus 127 filk~~~--n~k~l~~gGHSaGAHLa~qav~R~r~p-rI~gl~l~~Gv 171 (270)
T KOG4627|consen 127 FILKYTE--NTKVLTFGGHSAGAHLAAQAVMRQRSP-RIWGLILLCGV 171 (270)
T ss_pred HHHHhcc--cceeEEEcccchHHHHHHHHHHHhcCc-hHHHHHHHhhH
Confidence 8766543 34444 45789999999875 45555 58999887654
No 123
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.09 E-value=0.0047 Score=54.04 Aligned_cols=106 Identities=21% Similarity=0.179 Sum_probs=69.0
Q ss_pred CccE-EEEeCCCCCchhhhhhcchHHHHHH---HhCCEEEeeeccccccCCC-CCCccccccccccCCccCHHHHHHHHH
Q 023020 105 LGPI-FLYCGNEGDIEWFAVNSGFVWDIAP---RFGAMLVFPEHRYYGESMP-YGSTEVAYQNATTLSYLTAEQALADFA 179 (288)
Q Consensus 105 ~~pI-~l~~Ggeg~~~~~~~~~~~~~~lA~---~~g~~Vi~lEhRgyG~S~P-~~~~~~~~~~~~~l~ylt~~qal~Dl~ 179 (288)
..|| ++.|..+-.... .+.-....+++ +.|+.++-++.||-|+|.- ++.. ---++|.+
T Consensus 27 ~~~iAli~HPHPl~gGt--m~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G---------------iGE~~Da~ 89 (210)
T COG2945 27 AAPIALICHPHPLFGGT--MNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG---------------IGELEDAA 89 (210)
T ss_pred CCceEEecCCCccccCc--cCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC---------------cchHHHHH
Confidence 3565 445654321111 22234444544 4599999999999999962 1110 01357888
Q ss_pred HHHHHHHHhcCCCCCCE-EEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 180 VFITNLKQNLSAEASPV-VLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 180 ~fi~~l~~~~~~~~~~~-il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
..+++++.+. ++.+. .+.|.|+|+.+|+..+++.|+ ....++.++|+.
T Consensus 90 aaldW~~~~h--p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 90 AALDWLQARH--PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred HHHHHHHhhC--CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 8889998764 34554 778999999999999999998 334444456654
No 124
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.09 E-value=0.0022 Score=57.88 Aligned_cols=76 Identities=21% Similarity=0.164 Sum_probs=47.0
Q ss_pred CEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 137 AMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 137 ~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
..++.++.+|.|.-.-.+- .-++++.++.++.-+.. ...+.||.++||||||+||-.++.++-
T Consensus 34 iel~avqlPGR~~r~~ep~------------~~di~~Lad~la~el~~-----~~~d~P~alfGHSmGa~lAfEvArrl~ 96 (244)
T COG3208 34 IELLAVQLPGRGDRFGEPL------------LTDIESLADELANELLP-----PLLDAPFALFGHSMGAMLAFEVARRLE 96 (244)
T ss_pred hheeeecCCCcccccCCcc------------cccHHHHHHHHHHHhcc-----ccCCCCeeecccchhHHHHHHHHHHHH
Confidence 5799999999986431111 11344444444433321 134679999999999999987775543
Q ss_pred c---ccceeEEe--cCcc
Q 023020 217 H---IAIGALAS--SAPI 229 (288)
Q Consensus 217 ~---~v~g~vas--Sapv 229 (288)
. ...++++| +||.
T Consensus 97 ~~g~~p~~lfisg~~aP~ 114 (244)
T COG3208 97 RAGLPPRALFISGCRAPH 114 (244)
T ss_pred HcCCCcceEEEecCCCCC
Confidence 2 25566655 4773
No 125
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.02 E-value=0.0018 Score=62.41 Aligned_cols=119 Identities=17% Similarity=0.142 Sum_probs=54.6
Q ss_pred cc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccC--CCCCCccc-ccc-----ccc--c--CCcc---
Q 023020 106 GP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGES--MPYGSTEV-AYQ-----NAT--T--LSYL--- 169 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S--~P~~~~~~-~~~-----~~~--~--l~yl--- 169 (288)
-| |||-||..|.-..| +.+..+||. .|+.|+++|||..=-+ ....+... ... ..+ . ++..
T Consensus 100 ~PvvIFSHGlgg~R~~y---S~~~~eLAS-~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSY---SAICGELAS-HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp EEEEEEE--TT--TTTT---HHHHHHHHH-TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCEEEEeCCCCcchhhH---HHHHHHHHh-CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 46 45568877766654 356678996 5999999999974211 11000000 000 000 0 0000
Q ss_pred -----C---HHHHHHHHHHHHHHHHHh-cC-------------------CCCCCEEEeecChhHHHHHHHHHhcccccce
Q 023020 170 -----T---AEQALADFAVFITNLKQN-LS-------------------AEASPVVLFGGSYGGMLAAWMRLKYPHIAIG 221 (288)
Q Consensus 170 -----t---~~qal~Dl~~fi~~l~~~-~~-------------------~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g 221 (288)
. +++=++|+...++.+..- .+ .+-.++.++|||+||+.++....+.+. +.+
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r-~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTR-FKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT---E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccC-cce
Confidence 0 123355666666555420 00 012368999999999999998777744 666
Q ss_pred eEEecCcc
Q 023020 222 ALASSAPI 229 (288)
Q Consensus 222 ~vasSapv 229 (288)
+|+--+.+
T Consensus 255 ~I~LD~W~ 262 (379)
T PF03403_consen 255 GILLDPWM 262 (379)
T ss_dssp EEEES---
T ss_pred EEEeCCcc
Confidence 66654433
No 126
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.00 E-value=0.0042 Score=59.66 Aligned_cols=95 Identities=16% Similarity=0.113 Sum_probs=52.7
Q ss_pred HHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCcc-----------C-HHHHHHHHHHHHHHHHHhcCCCCCC
Q 023020 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYL-----------T-AEQALADFAVFITNLKQNLSAEASP 195 (288)
Q Consensus 128 ~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~yl-----------t-~~qal~Dl~~fi~~l~~~~~~~~~~ 195 (288)
-.+||+ .|+.|+++|-+|+|+..+..... ...+..+. | .-...-|....++.+...-..+..+
T Consensus 153 g~~LAk-~GYVvla~D~~g~GER~~~e~~~----~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~R 227 (390)
T PF12715_consen 153 GDQLAK-RGYVVLAPDALGFGERGDMEGAA----QGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDR 227 (390)
T ss_dssp HHHHHT-TTSEEEEE--TTSGGG-SSCCCT----TTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEE
T ss_pred HHHHHh-CCCEEEEEccccccccccccccc----cccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccc
Confidence 346665 59999999999999975432210 01111111 1 0112233344556665433334568
Q ss_pred EEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 196 VVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 196 ~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
+-++|.||||..+.|++..-+. |.++++++..
T Consensus 228 IG~~GfSmGg~~a~~LaALDdR-Ika~v~~~~l 259 (390)
T PF12715_consen 228 IGCMGFSMGGYRAWWLAALDDR-IKATVANGYL 259 (390)
T ss_dssp EEEEEEGGGHHHHHHHHHH-TT---EEEEES-B
T ss_pred eEEEeecccHHHHHHHHHcchh-hHhHhhhhhh
Confidence 9999999999999999988875 6777765443
No 127
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.00 E-value=0.0049 Score=56.42 Aligned_cols=102 Identities=25% Similarity=0.254 Sum_probs=62.6
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
=||+++++|-.....+ .+.+...+|. +|+.||.+|....+. + .+ ..-+++++++++.+
T Consensus 17 yPVv~f~~G~~~~~s~--Ys~ll~hvAS-hGyIVV~~d~~~~~~--~-~~----------------~~~~~~~~~vi~Wl 74 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSW--YSQLLEHVAS-HGYIVVAPDLYSIGG--P-DD----------------TDEVASAAEVIDWL 74 (259)
T ss_pred cCEEEEeCCcCCCHHH--HHHHHHHHHh-CceEEEEecccccCC--C-Cc----------------chhHHHHHHHHHHH
Confidence 4776665555433222 2355666664 699999999555332 1 11 11234444445544
Q ss_pred HHh----c----CCCCCCEEEeecChhHHHHHHHHHhc-----ccccceeEEecCccc
Q 023020 186 KQN----L----SAEASPVVLFGGSYGGMLAAWMRLKY-----PHIAIGALASSAPIL 230 (288)
Q Consensus 186 ~~~----~----~~~~~~~il~G~SyGG~lAa~~~~ky-----P~~v~g~vasSapv~ 230 (288)
.+. + ..+-.++-+.|||-||-+|..++..+ +..+.++++.. ||-
T Consensus 75 ~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD-PVd 131 (259)
T PF12740_consen 75 AKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLD-PVD 131 (259)
T ss_pred HhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEec-ccc
Confidence 332 1 12335899999999999999998887 66788888754 443
No 128
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.99 E-value=0.0016 Score=68.15 Aligned_cols=117 Identities=18% Similarity=0.120 Sum_probs=70.8
Q ss_pred CccE-EEEeCCCCCchhhhh-hcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 105 LGPI-FLYCGNEGDIEWFAV-NSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 105 ~~pI-~l~~Ggeg~~~~~~~-~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
+-|+ |..|||+++...... ..++...++...|+.|+.+|-||-|-.-+.-.. + -..+++...+ .|....+
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~--~--~~~~lG~~ev----~D~~~~~ 596 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS--A--LPRNLGDVEV----KDQIEAV 596 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH--H--hhhhcCCcch----HHHHHHH
Confidence 4565 446898874321110 123334456677999999999997654221000 0 1123343333 4444444
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccccc-ceeEEecCccc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIA-IGALASSAPIL 230 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v-~g~vasSapv~ 230 (288)
+.+.+..-.+..++.++|+||||.++++...++|+.+ +.+++ -+||.
T Consensus 597 ~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgva-vaPVt 644 (755)
T KOG2100|consen 597 KKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVA-VAPVT 644 (755)
T ss_pred HHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEE-eccee
Confidence 5444433345568999999999999999999999544 44455 67775
No 129
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.92 E-value=0.0037 Score=57.87 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=67.3
Q ss_pred CccEEE-EeCCCCCch----hhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHH
Q 023020 105 LGPIFL-YCGNEGDIE----WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFA 179 (288)
Q Consensus 105 ~~pI~l-~~Ggeg~~~----~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~ 179 (288)
++|+|+ ||--+-+-. .+.. ..-+.++.+ ++.++-+|.+|+..-.+.- .++..|.|++|..+++.
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~-~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~--------p~~y~yPsmd~LAe~l~ 90 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFN-FEDMQEILQ--NFCIYHIDAPGQEEGAATL--------PEGYQYPSMDQLAEMLP 90 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHC-SHHHHHHHT--TSEEEEEE-TTTSTT-------------TT-----HHHHHCTHH
T ss_pred CCceEEEeccccccchHHHHHHhc-chhHHHHhh--ceEEEEEeCCCCCCCcccc--------cccccccCHHHHHHHHH
Confidence 367666 786332222 1221 223445554 6799999999997643311 23457899999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 180 VFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 180 ~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
.++++++.+ .+|-+|-.-|+.+-+.|+.+||+.|.|+|+.+
T Consensus 91 ~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn 131 (283)
T PF03096_consen 91 EVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVN 131 (283)
T ss_dssp HHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred HHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEe
Confidence 999998753 69999999999999999999999999999965
No 130
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.92 E-value=0.0032 Score=55.91 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 170 t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
.++.....++.-+.....+......|++++|||+||.++.++..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 34555555554444333333222358999999999999976543
No 131
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.91 E-value=0.011 Score=54.07 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=37.0
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
.++..+..+-.++||||||.+++..-+++|+.+..+++.|+-+.
T Consensus 130 ~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 130 ARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred cccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 44555566799999999999999999999999999998775554
No 132
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.86 E-value=0.0027 Score=60.58 Aligned_cols=106 Identities=20% Similarity=0.300 Sum_probs=74.9
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHH--------HHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIA--------PRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALA 176 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA--------~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~ 176 (288)
-.|++++||-+|+...+.. ++.-|. .+.-+.||++-.+|||-|..... .-++ + +
T Consensus 152 v~PlLl~HGwPGsv~EFyk---fIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-----------~GFn---~-~ 213 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYK---FIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-----------TGFN---A-A 213 (469)
T ss_pred ccceEEecCCCchHHHHHh---hhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-----------CCcc---H-H
Confidence 4699999999998865532 222222 12346899999999999963222 1122 1 2
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
-+|.+++.+--+++ -.+..+=|+-||..|+..++..||+.|.|+.++..++.
T Consensus 214 a~ArvmrkLMlRLg--~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 214 ATARVMRKLMLRLG--YNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred HHHHHHHHHHHHhC--cceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 34566666655554 35899999999999999999999999999998765554
No 133
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=96.78 E-value=0.0035 Score=55.07 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
+++++.-+..+|+...+. ..+..+++++|.|.||++|+.+..++|+.+.|+++-|+.+.
T Consensus 83 i~~s~~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~ 141 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T
T ss_pred HHHHHHHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc
Confidence 455666666677665433 34456899999999999999999999999999998776543
No 134
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.58 E-value=0.021 Score=48.05 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=48.4
Q ss_pred CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh-
Q 023020 136 GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK- 214 (288)
Q Consensus 136 g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k- 214 (288)
+..|+.+|.+++|.+.+... +.+..+.++...+.. .. ...|++++|||+||.++..++.+
T Consensus 25 ~~~v~~~~~~g~~~~~~~~~--------------~~~~~~~~~~~~l~~---~~--~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 25 RRDVSALPLPGFGPGEPLPA--------------SADALVEAQAEAVLR---AA--GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred CccEEEecCCCCCCCCCCCC--------------CHHHHHHHHHHHHHH---hc--CCCCeEEEEECHHHHHHHHHHHHH
Confidence 46899999999987654221 344555444443332 11 24589999999999999888775
Q ss_pred --cccccceeEEec
Q 023020 215 --YPHIAIGALASS 226 (288)
Q Consensus 215 --yP~~v~g~vasS 226 (288)
.++.+.+++...
T Consensus 86 ~~~~~~~~~l~~~~ 99 (212)
T smart00824 86 EARGIPPAAVVLLD 99 (212)
T ss_pred HhCCCCCcEEEEEc
Confidence 455677777653
No 135
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.53 E-value=0.011 Score=54.00 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc-----ccceeEEecCccccc
Q 023020 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH-----IAIGALASSAPILQF 232 (288)
Q Consensus 170 t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~-----~v~g~vasSapv~~~ 232 (288)
+..+-..=+..++..|+++|.. .++-++||||||+.++.|...|-. .+.-.|...+|+.-.
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred CHHHHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 4555666777888888888764 478999999999999999988543 367788888898753
No 136
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.50 E-value=0.008 Score=52.02 Aligned_cols=58 Identities=16% Similarity=0.207 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
.+....+|..|++.|.... .++....++|||||+.++.......+..++.+|+..+|=
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 6788899999999998654 456789999999999999998877677888888776663
No 137
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.47 E-value=0.033 Score=54.83 Aligned_cols=113 Identities=18% Similarity=0.157 Sum_probs=62.7
Q ss_pred CccEEE-EeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccc--cccC-CCCCCccccccccccCCccCHHHHHHHHHH
Q 023020 105 LGPIFL-YCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRY--YGES-MPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (288)
Q Consensus 105 ~~pI~l-~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRg--yG~S-~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~ 180 (288)
+-||++ +|||.-..............++.+.+..||.+.+|= +|-- .+.... . +-...+.|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~------~------~gN~Gl~Dq~~ 191 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDA------P------SGNYGLLDQRL 191 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTS------H------BSTHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccccccccccc------C------chhhhhhhhHH
Confidence 358655 688753222110001112356666799999999992 3421 111110 1 11246777777
Q ss_pred HHHHHHHh---cCCCCCCEEEeecChhHHHHHHHHHhcc---cccceeEEecCccc
Q 023020 181 FITNLKQN---LSAEASPVVLFGGSYGGMLAAWMRLKYP---HIAIGALASSAPIL 230 (288)
Q Consensus 181 fi~~l~~~---~~~~~~~~il~G~SyGG~lAa~~~~kyP---~~v~g~vasSapv~ 230 (288)
-++.+++. ++.+..+|.|+|+|-||+.+.....- | .+++.+|+.|+...
T Consensus 192 AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 192 ALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--TT
T ss_pred HHHHHHhhhhhcccCCcceeeeeecccccccceeeec-cccccccccccccccccc
Confidence 77777753 44455689999999998888776655 5 48999999887443
No 138
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.46 E-value=0.01 Score=49.16 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc----ccceeEEecCcc
Q 023020 174 ALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH----IAIGALASSAPI 229 (288)
Q Consensus 174 al~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~----~v~g~vasSapv 229 (288)
...++...++....++ +..+++++|||+||++|..++..++. ....++.-++|-
T Consensus 10 ~~~~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 10 LANLVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 3344444444443332 35799999999999999998877765 455555555554
No 139
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.44 E-value=0.0043 Score=58.82 Aligned_cols=107 Identities=11% Similarity=0.075 Sum_probs=59.8
Q ss_pred ccEEEEeCCCCCc-hhhhhhcchHHHHHHH--hCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDI-EWFAVNSGFVWDIAPR--FGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 106 ~pI~l~~Ggeg~~-~~~~~~~~~~~~lA~~--~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
..+|++||-.+.. +..+. ..+...+.++ .+++||++|....-.. .... . -..++..-.-++.|+
T Consensus 72 pt~iiiHGw~~~~~~~~~~-~~~~~all~~~~~d~NVI~VDWs~~a~~-~Y~~------a-----~~n~~~vg~~la~~l 138 (331)
T PF00151_consen 72 PTVIIIHGWTGSGSSESWI-QDMIKALLQKDTGDYNVIVVDWSRGASN-NYPQ------A-----VANTRLVGRQLAKFL 138 (331)
T ss_dssp EEEEEE--TT-TT-TTTHH-HHHHHHHHCC--S-EEEEEEE-HHHHSS--HHH------H-----HHHHHHHHHHHHHHH
T ss_pred CeEEEEcCcCCcccchhHH-HHHHHHHHhhccCCceEEEEcchhhccc-cccc------h-----hhhHHHHHHHHHHHH
Confidence 4477789976655 22221 1223334444 4789999998643221 0000 0 012345556667777
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc--ccceeEEe
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH--IAIGALAS 225 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~--~v~g~vas 225 (288)
+.|....+.+..++.++|||+|+-+|......... .+..+++-
T Consensus 139 ~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgL 183 (331)
T PF00151_consen 139 SFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGL 183 (331)
T ss_dssp HHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEE
T ss_pred HHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEec
Confidence 77775544555799999999999999999888777 66555543
No 140
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.43 E-value=0.012 Score=51.39 Aligned_cols=81 Identities=25% Similarity=0.230 Sum_probs=59.4
Q ss_pred chHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhH
Q 023020 126 GFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGG 205 (288)
Q Consensus 126 ~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG 205 (288)
++...|++ .|+.|+.+|-+-|=-+.. |.+|..+|++.++++...+.+ ..+++|+|.|+|+
T Consensus 20 ~~a~~l~~-~G~~VvGvdsl~Yfw~~r-----------------tP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGA 79 (192)
T PF06057_consen 20 QIAEALAK-QGVPVVGVDSLRYFWSER-----------------TPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGA 79 (192)
T ss_pred HHHHHHHH-CCCeEEEechHHHHhhhC-----------------CHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCc
Confidence 44455554 499999999866655532 467999999999999887654 4689999999999
Q ss_pred HHHHHHHHhccc----ccceeEEec
Q 023020 206 MLAAWMRLKYPH----IAIGALASS 226 (288)
Q Consensus 206 ~lAa~~~~kyP~----~v~g~vasS 226 (288)
-+.-...-+-|. .|..+++.+
T Consensus 80 DvlP~~~nrLp~~~r~~v~~v~Ll~ 104 (192)
T PF06057_consen 80 DVLPFIYNRLPAALRARVAQVVLLS 104 (192)
T ss_pred hhHHHHHhhCCHHHHhheeEEEEec
Confidence 777776666675 355555533
No 141
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.43 E-value=0.0075 Score=57.19 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=60.0
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCE---EEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAM---LVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~---Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
-|++++||+.+....+.. +...+ ...|+. +..+++.+- +.+.+. ....+|..+=+...+
T Consensus 60 ~pivlVhG~~~~~~~~~~---~~~~~-~~~g~~~~~~~~~~~~~~--~~~~~~------------~~~~~ql~~~V~~~l 121 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLP---LDYRL-AILGWLTNGVYAFELSGG--DGTYSL------------AVRGEQLFAYVDEVL 121 (336)
T ss_pred ceEEEEccCcCCcchhhh---hhhhh-cchHHHhccccccccccc--CCCccc------------cccHHHHHHHHHHHH
Confidence 699999997443332211 11112 223444 777776644 211111 123445443333333
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc--cccceeEEecCccc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP--HIAIGALASSAPIL 230 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP--~~v~g~vasSapv~ 230 (288)
... + ..++.++|||+||.++.++...++ ..|..++.-+.|-.
T Consensus 122 ~~~----g--a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 122 AKT----G--AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred hhc----C--CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 321 1 258999999999999999999999 77888877676654
No 142
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.43 E-value=0.026 Score=48.36 Aligned_cols=104 Identities=19% Similarity=0.237 Sum_probs=63.8
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHH---hCCEEEeeeccc-----cccCCCCCCccccccccccCCccCHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPR---FGAMLVFPEHRY-----YGESMPYGSTEVAYQNATTLSYLTAEQALAD 177 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~---~g~~Vi~lEhRg-----yG~S~P~~~~~~~~~~~~~l~ylt~~qal~D 177 (288)
..|+|-||..++.++ .++...|.+ .|..|.-+|..| +|.-+|-+.. ..++ ...+..
T Consensus 15 ~tilLaHGAGasmdS-----t~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~----------~t~~-~~~~~~ 78 (213)
T COG3571 15 VTILLAHGAGASMDS-----TSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS----------GTLN-PEYIVA 78 (213)
T ss_pred EEEEEecCCCCCCCC-----HHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc----------ccCC-HHHHHH
Confidence 457778997776653 234433332 499999999876 4544443321 1111 122222
Q ss_pred HHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccc
Q 023020 178 FAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (288)
Q Consensus 178 l~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~ 231 (288)
+++ +... ....|.|+=|+||||-++...+..--..|+++++-+-|+.+
T Consensus 79 ~aq----l~~~--l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp 126 (213)
T COG3571 79 IAQ----LRAG--LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP 126 (213)
T ss_pred HHH----HHhc--ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC
Confidence 222 2222 22459999999999999998876554459999988878764
No 143
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.43 E-value=0.11 Score=51.05 Aligned_cols=84 Identities=15% Similarity=0.154 Sum_probs=52.8
Q ss_pred CCEEEeeec-cccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCC-CCCCEEEeecChhHHHHHHHHH
Q 023020 136 GAMLVFPEH-RYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA-EASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 136 g~~Vi~lEh-RgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~-~~~~~il~G~SyGG~lAa~~~~ 213 (288)
.+.|+.+|. -|.|-|....+. .+.+-++.++|+..|++..-..+.. ...|+.++|.||||..+..++.
T Consensus 115 ~anllfiDqPvGtGfSy~~~~~----------~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTPI----------DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred cCcEEEecCCCCCCccCCCCCC----------CccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 478999995 599999632210 1222223348888888876554432 4579999999999975544432
Q ss_pred ----hc------ccccceeEEecCcc
Q 023020 214 ----KY------PHIAIGALASSAPI 229 (288)
Q Consensus 214 ----ky------P~~v~g~vasSapv 229 (288)
.. +=.++|+.+..+.+
T Consensus 185 ~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 185 EISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHhhcccccCCcccceeeEecCCCc
Confidence 22 12467887766544
No 144
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.39 E-value=0.055 Score=50.30 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=65.7
Q ss_pred HHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHH
Q 023020 129 WDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLA 208 (288)
Q Consensus 129 ~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lA 208 (288)
.++.+ .+-|+-+|-+|+=.-.|.- .++..|-|+|+..+|+..+++++.-+ -+|-+|-.-|..|-
T Consensus 73 ~ei~~--~fcv~HV~~PGqe~gAp~~--------p~~y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL 136 (326)
T KOG2931|consen 73 AEILE--HFCVYHVDAPGQEDGAPSF--------PEGYPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYIL 136 (326)
T ss_pred HHHHh--heEEEecCCCccccCCccC--------CCCCCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHH
Confidence 34444 4789999999985443311 22446889999999999999987642 58999999999999
Q ss_pred HHHHHhcccccceeEEec
Q 023020 209 AWMRLKYPHIAIGALASS 226 (288)
Q Consensus 209 a~~~~kyP~~v~g~vasS 226 (288)
+.|++++|++|.|+|+.+
T Consensus 137 ~rFAl~hp~rV~GLvLIn 154 (326)
T KOG2931|consen 137 ARFALNHPERVLGLVLIN 154 (326)
T ss_pred HHHHhcChhheeEEEEEe
Confidence 999999999999999875
No 145
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.38 E-value=0.029 Score=52.04 Aligned_cols=82 Identities=30% Similarity=0.401 Sum_probs=52.2
Q ss_pred HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCC-CCCCEEEeecChhHHHHHHHH
Q 023020 134 RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSA-EASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 134 ~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~-~~~~~il~G~SyGG~lAa~~~ 212 (288)
..|+.|++.|+.|.|. |+... .+.-.++-|...-.+.+....+. .+.+|.++|+|=||.=+.|.+
T Consensus 24 ~~GyaVv~pDY~Glg~--~y~~~------------~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 24 ARGYAVVAPDYEGLGT--PYLNG------------RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HCCCEEEecCCCCCCC--cccCc------------HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 4599999999999997 44321 12234455555444444332222 346999999999999888876
Q ss_pred Hh----cccc---cceeEEecCcc
Q 023020 213 LK----YPHI---AIGALASSAPI 229 (288)
Q Consensus 213 ~k----yP~~---v~g~vasSapv 229 (288)
.. -||+ +.|+++.+.|.
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHhHHhCcccccceeEEeccCCcc
Confidence 44 4554 66777654443
No 146
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.38 E-value=0.0072 Score=58.41 Aligned_cols=57 Identities=18% Similarity=0.279 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc------ccceeEEecCccc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH------IAIGALASSAPIL 230 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~------~v~g~vasSapv~ 230 (288)
.++....+...|+.+.... +.|++|+||||||.++..|....+. .|++.|..++|..
T Consensus 99 ~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 3466777777777765432 5799999999999999999888864 4889998888875
No 147
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.36 E-value=0.0092 Score=58.20 Aligned_cols=48 Identities=23% Similarity=0.389 Sum_probs=37.3
Q ss_pred HHHHHHhcCC--CCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 182 ITNLKQNLSA--EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 182 i~~l~~~~~~--~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+-.+.+++.. +..+.++.|+||||..|++++++||+.|.++++-|+-+
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3344444432 34578999999999999999999999999988877654
No 148
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=96.33 E-value=0.019 Score=50.11 Aligned_cols=46 Identities=35% Similarity=0.566 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeE
Q 023020 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGAL 223 (288)
Q Consensus 170 t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~v 223 (288)
..+++++.+...++... ...++++|.|+||..|.|++.+|+ +.+++
T Consensus 41 ~p~~a~~~l~~~i~~~~------~~~~~liGSSlGG~~A~~La~~~~--~~avL 86 (187)
T PF05728_consen 41 FPEEAIAQLEQLIEELK------PENVVLIGSSLGGFYATYLAERYG--LPAVL 86 (187)
T ss_pred CHHHHHHHHHHHHHhCC------CCCeEEEEEChHHHHHHHHHHHhC--CCEEE
Confidence 35677777766666442 234999999999999999999997 44433
No 149
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.27 E-value=0.012 Score=47.61 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
.+..-++.+..+++ +.++++.|||+||++|..++....
T Consensus 49 ~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhh
Confidence 33344444444443 468999999999999988876643
No 150
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.21 E-value=0.043 Score=52.80 Aligned_cols=122 Identities=19% Similarity=0.195 Sum_probs=62.0
Q ss_pred EEEEEEeccccC-CCCCCccEEE-EeCCCCCchhhhhhcchHHHHHHHh-CCEEEeeeccccc---cCCCCCCccccccc
Q 023020 89 SQRYLINTDHWV-GPNRLGPIFL-YCGNEGDIEWFAVNSGFVWDIAPRF-GAMLVFPEHRYYG---ESMPYGSTEVAYQN 162 (288)
Q Consensus 89 ~qry~~~~~~~~-~~~~~~pI~l-~~Ggeg~~~~~~~~~~~~~~lA~~~-g~~Vi~lEhRgyG---~S~P~~~~~~~~~~ 162 (288)
.|.||+...--+ .|+ ..||++ +|||+-........-.++..+.+.+ ...++++|.---. ++.+.+.
T Consensus 105 ~~s~Wlvk~P~~~~pk-~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPt------- 176 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPK-SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPT------- 176 (374)
T ss_pred cceEEEEeCCcccCCC-CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCch-------
Confidence 456777762111 222 247655 5888644332211111222222222 4578888865332 2211111
Q ss_pred cccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH--hccc---ccceeEEecCcccc
Q 023020 163 ATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL--KYPH---IAIGALASSAPILQ 231 (288)
Q Consensus 163 ~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~--kyP~---~v~g~vasSapv~~ 231 (288)
-..|+++ ..+++.+..+ ..+++|+|-|-||.|++-+.+ +.++ .=+.+|+.|+-+..
T Consensus 177 -------QL~qlv~----~Y~~Lv~~~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 177 -------QLRQLVA----TYDYLVESEG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred -------HHHHHHH----HHHHHHhccC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 1334444 4444442222 358999999999999987653 2211 12578887876654
No 151
>PLN02209 serine carboxypeptidase
Probab=96.21 E-value=0.08 Score=52.10 Aligned_cols=85 Identities=15% Similarity=0.181 Sum_probs=54.1
Q ss_pred CCEEEeeecc-ccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEeecChhHHHH----H
Q 023020 136 GAMLVFPEHR-YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGMLA----A 209 (288)
Q Consensus 136 g~~Vi~lEhR-gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~-~~~~~~il~G~SyGG~lA----a 209 (288)
.+.|+.+|.+ |.|-|....+ ..+.+.++.+.|+..|++..-..+. ....|+.++|.||||.-+ .
T Consensus 117 ~anllfiDqPvGtGfSy~~~~----------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTP----------IERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred cCcEEEecCCCCCCccCCCCC----------CCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHH
Confidence 4689999954 8999853221 1123344556999999888765543 234699999999999744 4
Q ss_pred HHHHhc-----c-cccceeEEecCccc
Q 023020 210 WMRLKY-----P-HIAIGALASSAPIL 230 (288)
Q Consensus 210 ~~~~ky-----P-~~v~g~vasSapv~ 230 (288)
.+.... | =.++|+++.++-+.
T Consensus 187 ~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 187 EISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHhhcccccCCceeeeeEEecCcccC
Confidence 443322 1 13668777665443
No 152
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.19 E-value=0.013 Score=52.00 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhc-----ccccceeEEecCcc
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY-----PHIAIGALASSAPI 229 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ky-----P~~v~g~vasSapv 229 (288)
.....++...++.+..++ ++.++++.|||+||++|..++... +..+..+...++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 108 KSLYNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 444555555555555443 457899999999999998877543 33455555544444
No 153
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.12 E-value=0.019 Score=54.84 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=59.9
Q ss_pred ccEEEE-eCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccc--cccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 106 GPIFLY-CGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRY--YGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 106 ~pI~l~-~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRg--yG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
-||+++ ||..+..+.+- -....+| +.|+.|.++||.| .|.....-.. .....-.-..+=..|+..++
T Consensus 71 ~PlvvlshG~Gs~~~~f~---~~A~~lA-s~Gf~Va~~~hpgs~~~~~~~~~~~------~~~~~p~~~~erp~dis~lL 140 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFA---WLAEHLA-SYGFVVAAPDHPGSNAGGAPAAYAG------PGSYAPAEWWERPLDISALL 140 (365)
T ss_pred CCeEEecCCCCCCccchh---hhHHHHh-hCceEEEeccCCCcccccCChhhcC------CcccchhhhhcccccHHHHH
Confidence 576665 77665544321 1123444 4699999999998 4555421110 00101111233456777777
Q ss_pred HHHHHh-----c--CCCCCCEEEeecChhHHHHHHHHHhccc
Q 023020 183 TNLKQN-----L--SAEASPVVLFGGSYGGMLAAWMRLKYPH 217 (288)
Q Consensus 183 ~~l~~~-----~--~~~~~~~il~G~SyGG~lAa~~~~kyP~ 217 (288)
+.+.+. + ..+..|+.++||||||..++...--..+
T Consensus 141 d~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 141 DALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 777655 1 1233589999999999999887644443
No 154
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.11 E-value=0.014 Score=56.66 Aligned_cols=118 Identities=13% Similarity=0.086 Sum_probs=81.0
Q ss_pred CCccEEEEeCCCCCchhhhhh---cchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccc-cCCcc--CHHH-HHH
Q 023020 104 RLGPIFLYCGNEGDIEWFAVN---SGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNAT-TLSYL--TAEQ-ALA 176 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~~~~---~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~-~l~yl--t~~q-al~ 176 (288)
++.||++.||-.++...|..+ .+...-||. .|+.|-.-.-||---|..--.. +.. +.++. +.++ +..
T Consensus 72 ~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~Lad-aGYDVWLgN~RGn~ySr~h~~l-----~~~~~~~FW~FS~~Em~~y 145 (403)
T KOG2624|consen 72 KRPVVLLQHGLLASSSSWVLNGPEQSLAFLLAD-AGYDVWLGNNRGNTYSRKHKKL-----SPSSDKEFWDFSWHEMGTY 145 (403)
T ss_pred CCCcEEEeeccccccccceecCccccHHHHHHH-cCCceeeecCcCcccchhhccc-----CCcCCcceeecchhhhhhc
Confidence 346788889988776655433 455556665 5999999999997667532222 221 22233 4444 788
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc---ccceeEEecCcc
Q 023020 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH---IAIGALASSAPI 229 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~---~v~g~vasSapv 229 (288)
|+.+.|+++-..-+ ..+...+|||-|++..-.+....|+ .|..+++-++++
T Consensus 146 DLPA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 146 DLPAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred CHHHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 99999999876532 4689999999999998888777776 577777744333
No 155
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.08 E-value=0.059 Score=55.95 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=24.9
Q ss_pred CEEEeecChhHHHHHHHHHhcccccceeE----EecCcccc
Q 023020 195 PVVLFGGSYGGMLAAWMRLKYPHIAIGAL----ASSAPILQ 231 (288)
Q Consensus 195 ~~il~G~SyGG~lAa~~~~kyP~~v~g~v----asSapv~~ 231 (288)
.+|++||||||.+|..+. .+|+.+.|.| --|+|..+
T Consensus 183 sVILVGHSMGGiVAra~~-tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATL-TLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred eEEEEeccchhHHHHHHH-hhhhhccchhhhhhhhcCcccC
Confidence 499999999999986653 4666566654 22556544
No 156
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.02 E-value=0.039 Score=49.58 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=58.3
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhC--CEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFG--AMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFI 182 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g--~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi 182 (288)
+..+||+||...+.+... ....++....+ ..+|.+..+..|.-. + |.. .--+.+.+..+++.|+
T Consensus 18 ~~vlvfVHGyn~~f~~a~---~r~aql~~~~~~~~~~i~FsWPS~g~~~--~-----Y~~----d~~~a~~s~~~l~~~L 83 (233)
T PF05990_consen 18 KEVLVFVHGYNNSFEDAL---RRAAQLAHDLGFPGVVILFSWPSDGSLL--G-----YFY----DRESARFSGPALARFL 83 (233)
T ss_pred CeEEEEEeCCCCCHHHHH---HHHHHHHHHhCCCceEEEEEcCCCCChh--h-----hhh----hhhhHHHHHHHHHHHH
Confidence 356788899765544221 22334554443 368888877766521 1 100 0114667888888999
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHH
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~ 212 (288)
+.+.... ...++.+++||||+.+.+...
T Consensus 84 ~~L~~~~--~~~~I~ilaHSMG~rv~~~aL 111 (233)
T PF05990_consen 84 RDLARAP--GIKRIHILAHSMGNRVLLEAL 111 (233)
T ss_pred HHHHhcc--CCceEEEEEeCchHHHHHHHH
Confidence 8887642 346899999999999987764
No 157
>PLN02454 triacylglycerol lipase
Probab=95.95 E-value=0.026 Score=54.87 Aligned_cols=42 Identities=26% Similarity=0.312 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh
Q 023020 173 QALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 173 qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k 214 (288)
.+..++...++.+.+++.....++++.|||+||+||+..+..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 355555666666666664333359999999999999998744
No 158
>PRK04940 hypothetical protein; Provisional
Probab=95.92 E-value=0.051 Score=47.17 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcccc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~ 231 (288)
.+++++-+...+..+.... ...++.++|.|+||.-|.|++.+|. +.++++ .+.|.+
T Consensus 39 P~~a~~~l~~~i~~~~~~~--~~~~~~liGSSLGGyyA~~La~~~g--~~aVLi-NPAv~P 94 (180)
T PRK04940 39 PKHDMQHLLKEVDKMLQLS--DDERPLICGVGLGGYWAERIGFLCG--IRQVIF-NPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHHHhhhcc--CCCCcEEEEeChHHHHHHHHHHHHC--CCEEEE-CCCCCh
Confidence 4556655555554322210 1247999999999999999999997 566655 555543
No 159
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.80 E-value=0.038 Score=50.95 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=66.4
Q ss_pred cc-EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCC------CCCccccccc---cccCCccCHHHHH
Q 023020 106 GP-IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMP------YGSTEVAYQN---ATTLSYLTAEQAL 175 (288)
Q Consensus 106 ~p-I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P------~~~~~~~~~~---~~~l~ylt~~qal 175 (288)
-| ||-+||-.|....+. + +..++. .|+.|+..|-||-|.|.- .++.-.++-+ .++-+.+=.....
T Consensus 83 ~P~vV~fhGY~g~~g~~~---~-~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~ 157 (321)
T COG3458 83 LPAVVQFHGYGGRGGEWH---D-MLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVF 157 (321)
T ss_pred cceEEEEeeccCCCCCcc---c-cccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeeh
Confidence 34 777999665443110 1 223443 499999999999998832 1100000000 0001111122345
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 176 ADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 176 ~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
.|+...++.+..-..-+..++.+.|+|-||.||+..+...|. ++++++.-
T Consensus 158 ~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r-ik~~~~~~ 207 (321)
T COG3458 158 LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR-IKAVVADY 207 (321)
T ss_pred HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh-hhcccccc
Confidence 566666666543222344689999999999999998887775 67766643
No 160
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.71 E-value=0.08 Score=53.98 Aligned_cols=145 Identities=20% Similarity=0.206 Sum_probs=83.4
Q ss_pred eEEEeecCC-CCCCCCCeEEEEEEEecc---------ccCCC---CCCccEEEEe-CCCCCc-hhhhhhcchHHHHHHHh
Q 023020 71 RYFEQRLDH-FSFADLPTFSQRYLINTD---------HWVGP---NRLGPIFLYC-GNEGDI-EWFAVNSGFVWDIAPRF 135 (288)
Q Consensus 71 ~~f~Q~lDH-f~~~~~~tf~qry~~~~~---------~~~~~---~~~~pI~l~~-Ggeg~~-~~~~~~~~~~~~lA~~~ 135 (288)
.-.+|++=- ||++ ..+.+|.|+... .|+.. ...+|++|+- |.-|.. ...+.. . ...|..
T Consensus 402 ~LkqqeV~~g~dp~--~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~-~-~lSLlD-- 475 (682)
T COG1770 402 LLKQQEVPGGFDPE--DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSI-A-RLSLLD-- 475 (682)
T ss_pred EEEeccCCCCCChh--HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCccc-c-eeeeec--
Confidence 445666655 7765 678899988742 12110 1235666653 333322 211110 0 112333
Q ss_pred CCEEEeeec-cccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHh-cCCCCCCEEEeecChhHHHHHHHHH
Q 023020 136 GAMLVFPEH-RYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQN-LSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 136 g~~Vi~lEh-RgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~-~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
.+.|+++=| ||=|.=- .. --++-+.++=.....|..+..++|.++ +. +...+++.|||-||+|....+-
T Consensus 476 RGfiyAIAHVRGGgelG---~~-----WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~-~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 476 RGFVYAIAHVRGGGELG---RA-----WYEDGKLLNKKNTFTDFIAAARHLVKEGYT-SPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred CceEEEEEEeecccccC---hH-----HHHhhhhhhccccHHHHHHHHHHHHHcCcC-CccceEEeccCchhHHHHHHHh
Confidence 356777777 6644321 00 011223344444555666666666543 32 3358999999999999999999
Q ss_pred hcccccceeEEecCccc
Q 023020 214 KYPHIAIGALASSAPIL 230 (288)
Q Consensus 214 kyP~~v~g~vasSapv~ 230 (288)
..|+++.|+|+-++-|-
T Consensus 547 ~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 547 MAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hChhhhhheeecCCccc
Confidence 99999999999776543
No 161
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.53 E-value=0.025 Score=55.84 Aligned_cols=112 Identities=20% Similarity=0.108 Sum_probs=65.5
Q ss_pred CccEEE-EeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccc--ccc---CCCC-CCccccccccccCCccCHHHHHHH
Q 023020 105 LGPIFL-YCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRY--YGE---SMPY-GSTEVAYQNATTLSYLTAEQALAD 177 (288)
Q Consensus 105 ~~pI~l-~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRg--yG~---S~P~-~~~~~~~~~~~~l~ylt~~qal~D 177 (288)
+.||++ +|||.-..........--..||++-+..||.+.||= +|- |.-. .+. ..+| -.+.|
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~-----~~~n-------~Gl~D 160 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDA-----FASN-------LGLLD 160 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccc-----cccc-------ccHHH
Confidence 458655 688853222111100113578887669999999992 232 1100 010 1122 34556
Q ss_pred HHHHHHHHHHh---cCCCCCCEEEeecChhHHHHHHHHHhccc---ccceeEEecCcc
Q 023020 178 FAVFITNLKQN---LSAEASPVVLFGGSYGGMLAAWMRLKYPH---IAIGALASSAPI 229 (288)
Q Consensus 178 l~~fi~~l~~~---~~~~~~~~il~G~SyGG~lAa~~~~kyP~---~v~g~vasSapv 229 (288)
+..-++.++++ ++.+...|.|+|+|-|++.++++. ..|+ +++.+|+-|++.
T Consensus 161 qilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Ll-a~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 161 QILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLL-AVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhh-cCccchHHHHHHHHhCCCC
Confidence 65556665543 455667899999999999888864 4565 677777766555
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=95.51 E-value=0.057 Score=50.91 Aligned_cols=122 Identities=19% Similarity=0.169 Sum_probs=65.8
Q ss_pred CccEEEEeCCCCCch-hhhhhcchHHHHHHHhCCEEEee--eccccccCCC----CCCccccc-cc--cccCCc--cCHH
Q 023020 105 LGPIFLYCGNEGDIE-WFAVNSGFVWDIAPRFGAMLVFP--EHRYYGESMP----YGSTEVAY-QN--ATTLSY--LTAE 172 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~-~~~~~~~~~~~lA~~~g~~Vi~l--EhRgyG~S~P----~~~~~~~~-~~--~~~l~y--lt~~ 172 (288)
.-||+++.+|..+.. .+....| +...+.+.|..++.. +-||+|+-.+ .+.. .+| .+ -+.... ...+
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g-~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~-~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDG-LRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGG-ASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccc-hhhhhhhcCeEEecCCCCcccCCCCccccccCCCc-cceecccccCccccCccchh
Confidence 357777776665442 2222223 567777888888884 4566655432 1211 111 00 000000 1122
Q ss_pred HHH-HHHHHHHHHHHHhcCCCC--CCEEEeecChhHHHHHHHHHhcccccceeEEecCcccc
Q 023020 173 QAL-ADFAVFITNLKQNLSAEA--SPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (288)
Q Consensus 173 qal-~Dl~~fi~~l~~~~~~~~--~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~ 231 (288)
..| .++-..+ .+.++... ..--++||||||.=|+.++.++|+.+..+.+-|+.+..
T Consensus 131 tfl~~ELP~~~---~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 131 TFLTQELPALW---EAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHHHhhhhHHH---HHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 222 2222222 22222222 26789999999999999999999988877766655543
No 163
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=95.50 E-value=0.054 Score=50.88 Aligned_cols=37 Identities=22% Similarity=0.199 Sum_probs=27.5
Q ss_pred CCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 193 ASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 193 ~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
..+++++|||+||+.++......-+ +..+|+--+-+.
T Consensus 240 ~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 240 TSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAWMF 276 (399)
T ss_pred hhhhhheeccccchhhhhhhccccc-eeeeeeeeeeec
Confidence 3578999999999999988766554 666666555443
No 164
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.47 E-value=0.015 Score=51.84 Aligned_cols=121 Identities=23% Similarity=0.298 Sum_probs=67.1
Q ss_pred CCccEEEEeCCCCCc-hhhhhhcchHHHHHHHhCCEEEeeeccccccCC-------CCCCccccc---cccccCCc-cCH
Q 023020 104 RLGPIFLYCGNEGDI-EWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESM-------PYGSTEVAY---QNATTLSY-LTA 171 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~-~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~-------P~~~~~~~~---~~~~~l~y-lt~ 171 (288)
...|++++..|-.+. +.+.+.+| +..-|.++|..||++|--=-|--. -++.. .+| .+.|.+.- ..+
T Consensus 42 k~~P~lf~LSGLTCT~~Nfi~Ksg-~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~G-AGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 42 KRCPVLFYLSGLTCTHENFIEKSG-FQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQG-AGFYVNATQEPWAKHYRM 119 (283)
T ss_pred CcCceEEEecCCcccchhhHhhhh-HHHhHhhcCeEEECCCCCCCccccCCCcccccccCC-ceeEEecccchHhhhhhH
Confidence 347998888776554 34555444 677888899999999963333221 11110 001 00011100 011
Q ss_pred -HHHHHHHHHHHHHHH-HhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 172 -EQALADFAVFITNLK-QNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 172 -~qal~Dl~~fi~~l~-~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
+-... ++.+.+. .....+..++-++||||||-=|+...+|.|.....+-+ -||+.
T Consensus 120 YdYv~k---ELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSA-FAPI~ 176 (283)
T KOG3101|consen 120 YDYVVK---ELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSA-FAPIC 176 (283)
T ss_pred HHHHHH---HHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceec-ccccc
Confidence 11111 2222222 12223445789999999999999999999997665433 46765
No 165
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.33 E-value=0.035 Score=49.76 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc----cccceeEEecCccc
Q 023020 177 DFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP----HIAIGALASSAPIL 230 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP----~~v~g~vasSapv~ 230 (288)
....+++.+...++ .++++.|||.||+||...+...+ +.|..++.-.+|=.
T Consensus 70 ~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 70 SALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 33455555555442 36999999999999999988744 45777776666643
No 166
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=95.32 E-value=0.038 Score=48.84 Aligned_cols=46 Identities=22% Similarity=0.265 Sum_probs=33.6
Q ss_pred HHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 183 TNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 183 ~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
+.|+........++.++|.|.||-+|+.++.++| .|.++|+.+++.
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 4454433333468999999999999999999999 588888776443
No 167
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.30 E-value=0.1 Score=48.02 Aligned_cols=88 Identities=28% Similarity=0.328 Sum_probs=52.7
Q ss_pred ccEEE-EeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GPIFL-YCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~pI~l-~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
-||++ +||-.-....| ..++..+| .+|+.||+++.-. ...|.+ .+-+++.+.+++.
T Consensus 46 yPVilF~HG~~l~ns~Y---s~lL~HIA-SHGfIVVAPQl~~--~~~p~~-----------------~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFY---SQLLAHIA-SHGFIVVAPQLYT--LFPPDG-----------------QDEIKSAASVINW 102 (307)
T ss_pred ccEEEEeechhhhhHHH---HHHHHHHh-hcCeEEEechhhc--ccCCCc-----------------hHHHHHHHHHHHH
Confidence 46544 56643222222 12344444 3699999988652 222311 1345666677776
Q ss_pred HHHhc--------CCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 185 LKQNL--------SAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 185 l~~~~--------~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
+.+.+ ...-.+..++|||.||-.|-.+++.|-
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 65432 123358999999999999988888874
No 168
>PLN02571 triacylglycerol lipase
Probab=95.13 E-value=0.078 Score=51.66 Aligned_cols=39 Identities=21% Similarity=0.369 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k 214 (288)
+|.++++..+++. +.....++++.|||+||+||+..+..
T Consensus 208 ~qvl~eV~~L~~~----y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEK----YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHh----cCcccccEEEeccchHHHHHHHHHHH
Confidence 5677777666543 32223479999999999999998764
No 169
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.05 E-value=0.025 Score=55.51 Aligned_cols=58 Identities=21% Similarity=0.208 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc--------ccceeEEecCccc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH--------IAIGALASSAPIL 230 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~--------~v~g~vasSapv~ 230 (288)
.+|.+..++..|+.+-+..+ ..|+++++|||||.+..+|...+|+ .+++.+..+||..
T Consensus 161 rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhc
Confidence 46888899999888766442 3699999999999999999999988 3566666666654
No 170
>COG3150 Predicted esterase [General function prediction only]
Probab=94.76 E-value=0.14 Score=44.14 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=59.6
Q ss_pred EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHH
Q 023020 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQ 187 (288)
Q Consensus 108 I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~ 187 (288)
|+.+||..++..+. -..+-++ -+.-|.|..+.|.|... ....|+++.+...+.....
T Consensus 2 ilYlHGFnSSP~sh------ka~l~~q----~~~~~~~~i~y~~p~l~-------------h~p~~a~~ele~~i~~~~~ 58 (191)
T COG3150 2 ILYLHGFNSSPGSH------KAVLLLQ----FIDEDVRDIEYSTPHLP-------------HDPQQALKELEKAVQELGD 58 (191)
T ss_pred eEEEecCCCCcccH------HHHHHHH----HHhccccceeeecCCCC-------------CCHHHHHHHHHHHHHHcCC
Confidence 67788876543321 1122222 24456788888887443 3578899888887765432
Q ss_pred hcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 188 NLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 188 ~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
....++|-|.||..|.|+...+- +.+++. .+.+.
T Consensus 59 ------~~p~ivGssLGGY~At~l~~~~G--irav~~-NPav~ 92 (191)
T COG3150 59 ------ESPLIVGSSLGGYYATWLGFLCG--IRAVVF-NPAVR 92 (191)
T ss_pred ------CCceEEeecchHHHHHHHHHHhC--Chhhhc-CCCcC
Confidence 23689999999999999998875 566555 44443
No 171
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.61 E-value=0.077 Score=47.72 Aligned_cols=107 Identities=18% Similarity=0.176 Sum_probs=68.5
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
+-.+++.||-|+.-..............+.++.+|.+-.| |.+.+ ++..|..+-..|+..+++|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~----Ssy~G-----------~Gt~slk~D~edl~~l~~Hi 100 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLR----SSYNG-----------YGTFSLKDDVEDLKCLLEHI 100 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecc----ccccc-----------cccccccccHHHHHHHHHHh
Confidence 3467788887764311111111223334568888888776 22211 12335667788999999987
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHH--HhcccccceeEEecCccc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMR--LKYPHIAIGALASSAPIL 230 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~--~kyP~~v~g~vasSapv~ 230 (288)
...- ...+++++|||-|..-.++|. ..-|..+.++|+ -|||.
T Consensus 101 ~~~~--fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIl-qApVS 144 (299)
T KOG4840|consen 101 QLCG--FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAIL-QAPVS 144 (299)
T ss_pred hccC--cccceEEEecCccchHHHHHHHhccchHHHHHHHH-hCccc
Confidence 6421 124899999999999888876 346777888887 67775
No 172
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=94.43 E-value=0.32 Score=44.50 Aligned_cols=116 Identities=13% Similarity=0.184 Sum_probs=68.6
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHh----CCEEEeeeccc----cccCCC---CCCccccccccccCCccCHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRF----GAMLVFPEHRY----YGESMP---YGSTEVAYQNATTLSYLTAEQA 174 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~----g~~Vi~lEhRg----yG~S~P---~~~~~~~~~~~~~l~ylt~~qa 174 (288)
-|.+|+||..|.++.. .+...++.++. ...++..|--| -|+=.. .+-.+-.| ++-+- +..+-
T Consensus 46 iPTIfIhGsgG~asS~---~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gf---e~n~~-s~~~~ 118 (288)
T COG4814 46 IPTIFIHGSGGTASSL---NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGF---EDNTA-SGLDQ 118 (288)
T ss_pred cceEEEecCCCChhHH---HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEE---ecCcC-chhhH
Confidence 5899999999888753 24455565543 35666666655 122100 00000000 11111 22222
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc-----ccceeEEecCccc
Q 023020 175 LADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH-----IAIGALASSAPIL 230 (288)
Q Consensus 175 l~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~-----~v~g~vasSapv~ 230 (288)
-.=+...+..|+..|+. .++-++||||||.-.+.|...|-+ .+.-.|+..+|..
T Consensus 119 s~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 44455666777777764 367899999999999999988765 2666666677766
No 173
>PLN02310 triacylglycerol lipase
Probab=94.40 E-value=0.097 Score=50.90 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh----cccccceeEEecCcc
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK----YPHIAIGALASSAPI 229 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k----yP~~v~g~vasSapv 229 (288)
.+|+++.+..+++..+.+ .+..++++.|||+||+||+..+.. .|+.-..++...+|-
T Consensus 188 ~~qVl~eV~~L~~~y~~~--~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPR 248 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRGK--GEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHHhhccc--CCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCC
Confidence 366776666665543211 124589999999999999887742 444322344445553
No 174
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.27 E-value=0.22 Score=47.56 Aligned_cols=42 Identities=12% Similarity=0.101 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHH
Q 023020 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 169 lt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~ 212 (288)
-+++++..+++.+++.+..+.. ..++.+++||||..+.+...
T Consensus 168 eS~~~Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~L 209 (377)
T COG4782 168 ESTNYSRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEAL 209 (377)
T ss_pred hhhhhhHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHH
Confidence 3688999999999999987532 45899999999999998764
No 175
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.27 E-value=0.13 Score=50.93 Aligned_cols=84 Identities=25% Similarity=0.206 Sum_probs=54.0
Q ss_pred CCEEEeeec-cccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhc---CCCCCCEEEeecChhHHHHHHH
Q 023020 136 GAMLVFPEH-RYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNL---SAEASPVVLFGGSYGGMLAAWM 211 (288)
Q Consensus 136 g~~Vi~lEh-RgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~---~~~~~~~il~G~SyGG~lAa~~ 211 (288)
.+.+|++|+ -|.|-|.-.++. +-.+.+.+-+|+..|.+.+...+ .....|++|+|-||||.-+..+
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e----------~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~ 215 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDE----------KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVF 215 (498)
T ss_pred CCceEEEecCcccCcccccccc----------cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHH
Confidence 478999995 588998632221 12345667788888877765432 1223589999999999998887
Q ss_pred HHhccc---ccceeEEecCcc
Q 023020 212 RLKYPH---IAIGALASSAPI 229 (288)
Q Consensus 212 ~~kyP~---~v~g~vasSapv 229 (288)
+..-=+ ...+.+.-++.+
T Consensus 216 A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 216 AHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred HHHHHHhccccCCceEeeeee
Confidence 744322 245555444433
No 176
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.21 E-value=0.15 Score=47.83 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=53.4
Q ss_pred CEEEeeecc-ccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEeecChhHHHHHHHHH-
Q 023020 137 AMLVFPEHR-YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGGMLAAWMRL- 213 (288)
Q Consensus 137 ~~Vi~lEhR-gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~-~~~~~~il~G~SyGG~lAa~~~~- 213 (288)
+.|+.+|.+ |-|-|....+. .+-+-++.+.|+..|++.+-..+. ..+.++.++|-||||.-+-.++.
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~----------~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPI----------DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCC----------CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 479999998 99999632211 122223334899998888765543 35679999999999975444432
Q ss_pred ---hc-----c-cccceeEEecCccc
Q 023020 214 ---KY-----P-HIAIGALASSAPIL 230 (288)
Q Consensus 214 ---ky-----P-~~v~g~vasSapv~ 230 (288)
.. | =.++|++...+.+.
T Consensus 72 I~~~n~~~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 72 ISQGNYICCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred HHhhcccccCCceeeeEEEeCCCCCC
Confidence 22 1 14667777655443
No 177
>PLN02324 triacylglycerol lipase
Probab=94.09 E-value=0.19 Score=49.04 Aligned_cols=38 Identities=16% Similarity=0.268 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
+|.++++..+++ .+...+..+++.|||+||+||+..+.
T Consensus 197 eqVl~eV~~L~~----~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLE----LYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHH----HCCCCCceEEEecCcHHHHHHHHHHH
Confidence 455555555443 34333357999999999999998874
No 178
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=93.87 E-value=0.12 Score=44.65 Aligned_cols=38 Identities=29% Similarity=0.314 Sum_probs=32.1
Q ss_pred CCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 193 ASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 193 ~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
..|+++++||.|+.+++.++...-..|.|+++.++|-.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 45799999999999999998777778999999766654
No 179
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=93.69 E-value=0.51 Score=46.09 Aligned_cols=104 Identities=10% Similarity=-0.008 Sum_probs=69.3
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.||+++-.--+.. +...+++...+.. |..|+.+|.+.=+.... . -+.+++++.+.=+..+++++
T Consensus 103 ~pvLiV~Pl~g~~--~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~-~-----------~~~f~ldDYi~~l~~~i~~~ 166 (406)
T TIGR01849 103 PAVLIVAPMSGHY--ATLLRSTVEALLP--DHDVYITDWVNARMVPL-S-----------AGKFDLEDYIDYLIEFIRFL 166 (406)
T ss_pred CcEEEEcCCchHH--HHHHHHHHHHHhC--CCcEEEEeCCCCCCCch-h-----------cCCCCHHHHHHHHHHHHHHh
Confidence 4777776533222 2123455555554 89999999887664421 1 14678889986555666554
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHh-----cccccceeEEecCccccc
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLK-----YPHIAIGALASSAPILQF 232 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~k-----yP~~v~g~vasSapv~~~ 232 (288)
+.++.++|.++||.+++.+... .|+.+..+++..+|+-..
T Consensus 167 -------G~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 167 -------GPDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred -------CCCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 2358999999999996655444 477799999889998643
No 180
>PLN02162 triacylglycerol lipase
Probab=93.67 E-value=0.18 Score=49.74 Aligned_cols=21 Identities=38% Similarity=0.488 Sum_probs=18.3
Q ss_pred CCCCEEEeecChhHHHHHHHH
Q 023020 192 EASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~ 212 (288)
++.++++.|||+||+||+.++
T Consensus 276 p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred CCceEEEEecChHHHHHHHHH
Confidence 356899999999999998874
No 181
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.58 E-value=0.16 Score=50.69 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
+|.++++..+++..+.. .++.++++.|||+||+||+..+.
T Consensus 298 eQVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHH
Confidence 67777777776654421 12357999999999999988774
No 182
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.34 E-value=0.74 Score=45.58 Aligned_cols=85 Identities=18% Similarity=0.160 Sum_probs=55.7
Q ss_pred CCEEEeeecc-ccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEeecChhH----HHHH
Q 023020 136 GAMLVFPEHR-YYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLS-AEASPVVLFGGSYGG----MLAA 209 (288)
Q Consensus 136 g~~Vi~lEhR-gyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~-~~~~~~il~G~SyGG----~lAa 209 (288)
-++++++|.+ |-|-|--... ..+. .+-+....|...|++..-+++. ....++.+.|-||+| +||.
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~--------~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTS--------SDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred cccEEEEecCCcCCccccCCC--------CcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 3689999997 8898852111 1112 3456778888888876655543 345699999999999 6666
Q ss_pred HHHHhc-----c-cccceeEEecCcc
Q 023020 210 WMRLKY-----P-HIAIGALASSAPI 229 (288)
Q Consensus 210 ~~~~ky-----P-~~v~g~vasSapv 229 (288)
...... | =-++|+++..+-+
T Consensus 188 ~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 188 EILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HHHhccccccCCcccceEEEecCccc
Confidence 665543 2 2467877755444
No 183
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=93.20 E-value=0.14 Score=51.97 Aligned_cols=57 Identities=16% Similarity=0.115 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc---------------cccceeEEecCccc
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP---------------HIAIGALASSAPIL 230 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP---------------~~v~g~vasSapv~ 230 (288)
++....+...|+.+.... .+.|++|+||||||.++..|...-+ ..|+..|..++|+.
T Consensus 193 d~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 193 DQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 566777777777765432 1469999999999999998865321 24677788788765
No 184
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=93.14 E-value=0.19 Score=50.83 Aligned_cols=83 Identities=17% Similarity=0.007 Sum_probs=62.5
Q ss_pred HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 134 RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 134 ~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
..||.||..|-||-|.|.-.-+ .+.+ |-++|-...|+.+.++ .-.+.+|-++|-||+|....+.+.
T Consensus 78 a~GYavV~qDvRG~~~SeG~~~-----------~~~~--~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa 143 (563)
T COG2936 78 AQGYAVVNQDVRGRGGSEGVFD-----------PESS--REAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAA 143 (563)
T ss_pred cCceEEEEecccccccCCcccc-----------eecc--ccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHh
Confidence 4599999999999999963221 1223 4567888888887764 234579999999999999999998
Q ss_pred hcccccceeEEecCccc
Q 023020 214 KYPHIAIGALASSAPIL 230 (288)
Q Consensus 214 kyP~~v~g~vasSapv~ 230 (288)
..|.-+++++..++.+-
T Consensus 144 ~~pPaLkai~p~~~~~D 160 (563)
T COG2936 144 LQPPALKAIAPTEGLVD 160 (563)
T ss_pred cCCchheeecccccccc
Confidence 88877887776555553
No 185
>PLN00413 triacylglycerol lipase
Probab=93.05 E-value=0.27 Score=48.66 Aligned_cols=22 Identities=36% Similarity=0.472 Sum_probs=19.1
Q ss_pred CCCCEEEeecChhHHHHHHHHH
Q 023020 192 EASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~~ 213 (288)
++.++++.|||+||++|..++.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 3568999999999999998873
No 186
>PLN02761 lipase class 3 family protein
Probab=92.87 E-value=0.23 Score=49.72 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=18.3
Q ss_pred CCCEEEeecChhHHHHHHHHH
Q 023020 193 ASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 193 ~~~~il~G~SyGG~lAa~~~~ 213 (288)
..++++.|||+||+||...+.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAY 313 (527)
T ss_pred CceEEEeccchHHHHHHHHHH
Confidence 457999999999999998774
No 187
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.84 E-value=0.2 Score=49.85 Aligned_cols=56 Identities=27% Similarity=0.301 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 174 ALADFAVFITNLKQN-LSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 174 al~Dl~~fi~~l~~~-~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
++.+.+.+.+.+.+. |+.....-...|+|-||--++..+++||+.++|+|+ .||-.
T Consensus 94 a~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlA-gaPA~ 150 (474)
T PF07519_consen 94 ALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILA-GAPAI 150 (474)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEe-CCchH
Confidence 444444445555444 344445678899999999999999999999999999 55543
No 188
>PLN02408 phospholipase A1
Probab=92.66 E-value=0.23 Score=47.74 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k 214 (288)
+|.++++..+++ ++.....++++.|||+||+||+..+..
T Consensus 182 ~qVl~eI~~ll~----~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQ----SYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHH----hcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345555444443 343223469999999999999887754
No 189
>PLN02633 palmitoyl protein thioesterase family protein
Probab=92.64 E-value=1.7 Score=40.92 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=67.9
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHh-CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRF-GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~-g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.-|+|+.||-+.++..... +-+.+++.+. |.-|..++. |.+. .+ +| +.++.+-++.+.+-++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~--~~~~~l~~~~~g~~~~~i~i---g~~~--~~---s~-------~~~~~~Qve~vce~l~ 87 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATN--ANFTQLLTNLSGSPGFCLEI---GNGV--GD---SW-------LMPLTQQAEIACEKVK 87 (314)
T ss_pred CCCeEEecCCCcccCCchH--HHHHHHHHhCCCCceEEEEE---CCCc--cc---cc-------eeCHHHHHHHHHHHHh
Confidence 3799999997655543211 2244555543 556665553 4441 11 11 2244444555544444
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc--ccceeEEecCccccccCC
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH--IAIGALASSAPILQFEDI 235 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~--~v~g~vasSapv~~~~~~ 235 (288)
...+ + + .=+.++|+|-||.++.-+.++.|+ -|+-.|.-++|..-..++
T Consensus 88 ~~~~-l--~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~ 137 (314)
T PLN02633 88 QMKE-L--S-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSL 137 (314)
T ss_pred hchh-h--h-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCC
Confidence 4322 1 1 248999999999999999999997 499999888887654443
No 190
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=92.17 E-value=0.19 Score=51.16 Aligned_cols=109 Identities=23% Similarity=0.337 Sum_probs=68.1
Q ss_pred ccEEEE-eCCCC-CchhhhhhcchHHHHHHHhCCEEEeeeccc---cccCCCCCCccccccccccCCccCHHHHHHHHHH
Q 023020 106 GPIFLY-CGNEG-DIEWFAVNSGFVWDIAPRFGAMLVFPEHRY---YGESMPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (288)
Q Consensus 106 ~pI~l~-~Ggeg-~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRg---yG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~ 180 (288)
.|.+|+ +||-+ ++...+-.+. ..|.+ .|+.+.+.+-|| ||++...+. +...=.+.++|..+
T Consensus 470 ~P~LLygYGay~isl~p~f~~sr--l~lld-~G~Vla~a~VRGGGe~G~~WHk~G-----------~lakKqN~f~Dfia 535 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASR--LSLLD-RGWVLAYANVRGGGEYGEQWHKDG-----------RLAKKQNSFDDFIA 535 (712)
T ss_pred CceEEEEecccceeeccccccce--eEEEe-cceEEEEEeeccCcccccchhhcc-----------chhhhcccHHHHHH
Confidence 576554 66644 3333221111 12233 577778888898 455543222 11223345666666
Q ss_pred HHHHHHHh-cCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCcc
Q 023020 181 FITNLKQN-LSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPI 229 (288)
Q Consensus 181 fi~~l~~~-~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv 229 (288)
=+++|..+ +. ...+..+.|+|-||.|++...-..|+++.++|+-.+.|
T Consensus 536 ~AeyLve~gyt-~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 536 CAEYLVENGYT-QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred HHHHHHHcCCC-CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 66666543 33 34689999999999999999999999999999855443
No 191
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=92.14 E-value=4.1 Score=38.22 Aligned_cols=135 Identities=14% Similarity=0.054 Sum_probs=69.4
Q ss_pred EEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccc--cccCCCC--C------Cccccc
Q 023020 91 RYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRY--YGESMPY--G------STEVAY 160 (288)
Q Consensus 91 ry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRg--yG~S~P~--~------~~~~~~ 160 (288)
+|..-.+-|..+.+.|.|||+||-..+.+|-.. .+....-..+.|+..+.+..+. ...+... . ..+...
T Consensus 73 ~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~-i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~ 151 (310)
T PF12048_consen 73 RFLALWRPANSAKPQGAVIILPDWGEHPDWPGL-IAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQL 151 (310)
T ss_pred EEEEEEecccCCCCceEEEEecCCCCCCCcHhH-HHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCc
Confidence 444443445454566889999985545543211 1222222234699999988776 2211100 0 000000
Q ss_pred ccccc-----------CCcc-CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc-ccceeEEecC
Q 023020 161 QNATT-----------LSYL-TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH-IAIGALASSA 227 (288)
Q Consensus 161 ~~~~~-----------l~yl-t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~-~v~g~vasSa 227 (288)
+.++ -.+. ..+...+=+...+..++.+ ...+++++||+.|+.+++.+..+.|. .++++|+.++
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 152 -SQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred -CCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 0000 0000 0122233333333333322 12349999999999999999888775 4889998776
Q ss_pred ccc
Q 023020 228 PIL 230 (288)
Q Consensus 228 pv~ 230 (288)
...
T Consensus 228 ~~p 230 (310)
T PF12048_consen 228 YWP 230 (310)
T ss_pred CCC
Confidence 553
No 192
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=91.93 E-value=2 Score=43.11 Aligned_cols=62 Identities=21% Similarity=0.295 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccccc
Q 023020 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQF 232 (288)
Q Consensus 170 t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~~ 232 (288)
|+++.+.-.+.|++.+...-.. ..|.+++|-.-||..++.++..+|+++.-+|+..||+...
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~-~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPD-APKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYW 178 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCC-CCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcccc
Confidence 6777777788899888765332 2389999999999999999999999999999989998643
No 193
>PLN02753 triacylglycerol lipase
Probab=91.85 E-value=0.37 Score=48.23 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
+|.++.+..+++..+.+ ..++.++++.|||+||+||+..+.
T Consensus 291 eQVl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccc-cCCCceEEEEccCHHHHHHHHHHH
Confidence 45555555544322211 112468999999999999998874
No 194
>PLN02802 triacylglycerol lipase
Probab=91.77 E-value=0.3 Score=48.69 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=19.6
Q ss_pred hcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 188 NLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 188 ~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
++.....++++.|||+||+||+..+.
T Consensus 324 ~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 324 KYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred hCCCCcceEEEeccchHHHHHHHHHH
Confidence 44333357999999999999987664
No 195
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=91.56 E-value=1.5 Score=38.45 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=51.2
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccc---cCCC-C----------CCccccc-c-ccccCCcc
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYG---ESMP-Y----------GSTEVAY-Q-NATTLSYL 169 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG---~S~P-~----------~~~~~~~-~-~~~~l~yl 169 (288)
.-|+.+||...+.+-+....+-+....++.++..+++|=+.-= ...+ . .....++ . ......+.
T Consensus 5 ~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 84 (212)
T PF03959_consen 5 PRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEYE 84 (212)
T ss_dssp -EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG-
T ss_pred ceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccccc
Confidence 3488899999888766443333333333335778887765432 1100 0 0000000 0 00011244
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCC-EEEeecChhHHHHHHHHHhcc--------cccceeEEecCcc
Q 023020 170 TAEQALADFAVFITNLKQNLSAEASP-VVLFGGSYGGMLAAWMRLKYP--------HIAIGALASSAPI 229 (288)
Q Consensus 170 t~~qal~Dl~~fi~~l~~~~~~~~~~-~il~G~SyGG~lAa~~~~kyP--------~~v~g~vasSapv 229 (288)
..+++++.+..+++.- .| .-++|.|-||++|+.+..... ..++-+|+.|++.
T Consensus 85 ~~~~sl~~l~~~i~~~--------GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 85 GLDESLDYLRDYIEEN--------GPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp --HHHHHHHHHHHHHH-----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred CHHHHHHHHHHHHHhc--------CCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 4666766666665541 35 359999999999998875422 2356677666544
No 196
>PLN02934 triacylglycerol lipase
Probab=91.14 E-value=0.36 Score=48.14 Aligned_cols=21 Identities=33% Similarity=0.477 Sum_probs=18.8
Q ss_pred CCCCEEEeecChhHHHHHHHH
Q 023020 192 EASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~ 212 (288)
++.++++.|||+||+||+.++
T Consensus 319 p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred CCCeEEEeccccHHHHHHHHH
Confidence 357999999999999999886
No 197
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.88 E-value=2.3 Score=38.17 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=65.3
Q ss_pred EEeccccCCCCCCccEEEEeCCCCCc--hhh---hh----hcc---hHHHHHHHhCCEEEeeecc----cccc-CCCCCC
Q 023020 93 LINTDHWVGPNRLGPIFLYCGNEGDI--EWF---AV----NSG---FVWDIAPRFGAMLVFPEHR----YYGE-SMPYGS 155 (288)
Q Consensus 93 ~~~~~~~~~~~~~~pI~l~~Ggeg~~--~~~---~~----~~~---~~~~lA~~~g~~Vi~lEhR----gyG~-S~P~~~ 155 (288)
+++...-.. ++.-++|+||.+--- .|. .. ++| .+.+-|.+.|+.|+.+.-- +|-+ -.|
T Consensus 91 F~s~~~lt~--~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np--- 165 (297)
T KOG3967|consen 91 FMSEDALTN--PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNP--- 165 (297)
T ss_pred EEChhHhcC--ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCc---
Confidence 444444333 346789999864311 111 01 112 1224466678988887543 4432 222
Q ss_pred ccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccc--cceeEEecCccc
Q 023020 156 TEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI--AIGALASSAPIL 230 (288)
Q Consensus 156 ~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~--v~g~vasSapv~ 230 (288)
++|.. ..+.-...+-.++... .....+.++.|||||.+.+-+..++|+. |.++-+.-+|+.
T Consensus 166 ----------~kyir--t~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 166 ----------QKYIR--TPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred ----------chhcc--chHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 23432 2233333444444322 2235799999999999999999999974 444444455554
No 198
>PLN02719 triacylglycerol lipase
Probab=90.84 E-value=0.51 Score=47.17 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=17.8
Q ss_pred CCEEEeecChhHHHHHHHHH
Q 023020 194 SPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 194 ~~~il~G~SyGG~lAa~~~~ 213 (288)
.++++.|||+||+||+..+.
T Consensus 298 ~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 47999999999999998774
No 199
>PLN02606 palmitoyl-protein thioesterase
Probab=90.04 E-value=3.6 Score=38.68 Aligned_cols=110 Identities=15% Similarity=0.117 Sum_probs=64.7
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHh-CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRF-GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITN 184 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~-g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~ 184 (288)
-|||+.||-..++.... -+-+.+++++. +.-+..++ -|.. ...+| +.++.+-++.+.+-++.
T Consensus 27 ~PvViwHGlgD~~~~~~--~~~~~~~i~~~~~~pg~~v~---ig~~-----~~~s~-------~~~~~~Qv~~vce~l~~ 89 (306)
T PLN02606 27 VPFVLFHGFGGECSNGK--VSNLTQFLINHSGYPGTCVE---IGNG-----VQDSL-------FMPLRQQASIACEKIKQ 89 (306)
T ss_pred CCEEEECCCCcccCCch--HHHHHHHHHhCCCCCeEEEE---ECCC-----ccccc-------ccCHHHHHHHHHHHHhc
Confidence 69999999764333211 12244555433 55455554 2211 00011 13444444444444444
Q ss_pred HHHhcCCCCCCEEEeecChhHHHHHHHHHhccc--ccceeEEecCccccccCCC
Q 023020 185 LKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH--IAIGALASSAPILQFEDIV 236 (288)
Q Consensus 185 l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~--~v~g~vasSapv~~~~~~~ 236 (288)
..+ + + .=+.++|.|-||.++.-+.+++|+ -|+-.|.-++|..-..++.
T Consensus 90 ~~~-L--~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p 139 (306)
T PLN02606 90 MKE-L--S-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIP 139 (306)
T ss_pred chh-h--c-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCc
Confidence 222 1 1 248999999999999999999998 4999998888886544433
No 200
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=89.93 E-value=2.4 Score=38.65 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=56.9
Q ss_pred EEEEeCCCCCch-hhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccC-HHHHHHHHHHHHHHH
Q 023020 108 IFLYCGNEGDIE-WFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLT-AEQALADFAVFITNL 185 (288)
Q Consensus 108 I~l~~Ggeg~~~-~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt-~~qal~Dl~~fi~~l 185 (288)
||-+.||..-.. +-.....+...|+++ |+.||+.=... | .++.. ..++......-++.+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~-Gy~ViAtPy~~-t-----------------fDH~~~A~~~~~~f~~~~~~L 79 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADR-GYAVIATPYVV-T-----------------FDHQAIAREVWERFERCLRAL 79 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhC-CcEEEEEecCC-C-----------------CcHHHHHHHHHHHHHHHHHHH
Confidence 677778764222 222234566778864 99999864321 0 11111 222333233333333
Q ss_pred HHhcCC--CCCCEEEeecChhHHHHHHHHHhcccccceeEEec
Q 023020 186 KQNLSA--EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASS 226 (288)
Q Consensus 186 ~~~~~~--~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasS 226 (288)
...... ...|++=+|||+|.-+-+.+...|+..-.|-++.|
T Consensus 80 ~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 80 QKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred HHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 332221 23588899999999999999988876666655543
No 201
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=89.83 E-value=1 Score=41.75 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=54.2
Q ss_pred CccEEEEeCCCCCch-hhhhhcchHHHHHHHh--CCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHH
Q 023020 105 LGPIFLYCGNEGDIE-WFAVNSGFVWDIAPRF--GAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVF 181 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~-~~~~~~~~~~~lA~~~--g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~f 181 (288)
..|||+.||-..++. ... -+.+.++.++. |.-|..++. |-|.+ .+. ++-=+.++.+.++.+...
T Consensus 5 ~~PvViwHGmGD~~~~~~~--m~~i~~~i~~~~PG~yV~si~i-g~~~~---~D~-------~~s~f~~v~~Qv~~vc~~ 71 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSS--MGSIKELIEEQHPGTYVHSIEI-GNDPS---EDV-------ENSFFGNVNDQVEQVCEQ 71 (279)
T ss_dssp S--EEEE--TT--S--TTT--HHHHHHHHHHHSTT--EEE--S-SSSHH---HHH-------HHHHHSHHHHHHHHHHHH
T ss_pred CCcEEEEEcCccccCChhH--HHHHHHHHHHhCCCceEEEEEE-CCCcc---hhh-------hhhHHHHHHHHHHHHHHH
Confidence 479999999765432 211 13355666554 444555443 11110 010 010123344555555444
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc-ccceeEEecCccccccCC
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH-IAIGALASSAPILQFEDI 235 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~-~v~g~vasSapv~~~~~~ 235 (288)
++... ... .=+.++|.|=||.++..+.+++|+ .|+-+|.-++|..-..++
T Consensus 72 l~~~p---~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~ 122 (279)
T PF02089_consen 72 LANDP---ELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGL 122 (279)
T ss_dssp HHH-G---GGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-
T ss_pred HhhCh---hhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccC
Confidence 44322 111 359999999999999999999986 588888888887644343
No 202
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=89.17 E-value=0.28 Score=45.72 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=36.4
Q ss_pred HHHHHHHhcCC--CCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 181 FITNLKQNLSA--EASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 181 fi~~l~~~~~~--~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
++=.++..+.. ....-+|.|.|+||.+|.+.++.||+.|--++..|+-+.
T Consensus 162 LlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 162 LLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred hhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 34445555432 123569999999999999999999999877776665554
No 203
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.13 E-value=0.62 Score=44.25 Aligned_cols=20 Identities=30% Similarity=0.396 Sum_probs=18.0
Q ss_pred CCCEEEeecChhHHHHHHHH
Q 023020 193 ASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 193 ~~~~il~G~SyGG~lAa~~~ 212 (288)
+..+++.|||+||+||..++
T Consensus 170 ~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred CcEEEEecCChHHHHHHHHH
Confidence 57899999999999998776
No 204
>PLN02847 triacylglycerol lipase
Probab=89.10 E-value=0.62 Score=47.40 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=18.9
Q ss_pred CCCCEEEeecChhHHHHHHHHH
Q 023020 192 EASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~~ 213 (288)
++-+++++|||+||++|+.+..
T Consensus 249 PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHH
Confidence 4579999999999999988654
No 205
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=88.84 E-value=1.3 Score=45.05 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=65.7
Q ss_pred ccCCCCCCcc--EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHH
Q 023020 98 HWVGPNRLGP--IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQAL 175 (288)
Q Consensus 98 ~~~~~~~~~p--I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal 175 (288)
-|.+|-|..+ ||-+|||+--+...-.+.....+||+++|.-|+.+|+---=+ .|++. -.+...
T Consensus 387 ~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-aPFPR--------------aleEv~ 451 (880)
T KOG4388|consen 387 LWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-APFPR--------------ALEEVF 451 (880)
T ss_pred cCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-CCCCc--------------HHHHHH
Confidence 4655433333 444688765443322344567899999999999999532111 12322 123333
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhccc----ccceeEEecCccc
Q 023020 176 ADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH----IAIGALASSAPIL 230 (288)
Q Consensus 176 ~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~----~v~g~vasSapv~ 230 (288)
--+-..|.+-. -++....++++.|-|-||.|..-.+++-=+ .-+|+++.-.|..
T Consensus 452 fAYcW~inn~a-llG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 452 FAYCWAINNCA-LLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred HHHHHHhcCHH-HhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 33333333221 234466799999999999988666554211 2256666554543
No 206
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.63 E-value=1.8 Score=37.58 Aligned_cols=37 Identities=24% Similarity=0.263 Sum_probs=33.5
Q ss_pred CEEEeecChhHHHHHHHHHhcccccceeEEecCcccc
Q 023020 195 PVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQ 231 (288)
Q Consensus 195 ~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~~ 231 (288)
..++-|+||||..|+.+-.++|+++.++|+-|+.-.+
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 4688999999999999999999999999998887654
No 207
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=88.57 E-value=1.2 Score=38.39 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh------cccccceeEEecCcccc
Q 023020 170 TAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK------YPHIAIGALASSAPILQ 231 (288)
Q Consensus 170 t~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k------yP~~v~g~vasSapv~~ 231 (288)
+..+..+++...++....+ -++.+++|.|.|-|++++...... ..+.|.++++.+-|...
T Consensus 59 S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 4677888888888876654 246799999999999999988766 44678898888888764
No 208
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=88.39 E-value=1.7 Score=42.45 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=74.3
Q ss_pred CccEEEEeCCCCCc--hhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHH-HHHHHH
Q 023020 105 LGPIFLYCGNEGDI--EWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQAL-ADFAVF 181 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~--~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal-~Dl~~f 181 (288)
+.|+++++.--... -.-..+.+++. ++-+.|..|+.++.|+=.++. +-.+.++.+ .++.+-
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~-~l~~~g~~vfvIsw~nPd~~~---------------~~~~~edYi~e~l~~a 170 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVR-WLLEQGLDVFVISWRNPDASL---------------AAKNLEDYILEGLSEA 170 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHH-HHHHcCCceEEEeccCchHhh---------------hhccHHHHHHHHHHHH
Confidence 47888888743211 11112334443 444569999999988755553 234677777 777777
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccc-cceeEEecCccc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHI-AIGALASSAPIL 230 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~-v~g~vasSapv~ 230 (288)
++.++...+ ..++-++|++.||++++.+...+|.. |+.+++-.+|+-
T Consensus 171 id~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 171 IDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 777765432 25799999999999999999999987 888777677764
No 209
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.22 E-value=0.84 Score=42.62 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=26.0
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
+..+++.| ++..+.+.|||.||++|+.+-..|.
T Consensus 266 ~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 266 LGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhC--CCceEEEeccccchHHHHHhccccC
Confidence 33444444 4789999999999999999988875
No 210
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.22 E-value=0.84 Score=42.62 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=26.0
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYP 216 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP 216 (288)
+..+++.| ++..+.+.|||.||++|+.+-..|.
T Consensus 266 ~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 266 LGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhC--CCceEEEeccccchHHHHHhccccC
Confidence 33444444 4789999999999999999988875
No 211
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=87.45 E-value=1.7 Score=43.52 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=58.1
Q ss_pred ccE-EEEeCCCCCchhhhh-hcchHHHHHHHhCCEEEeeeccc--ccc-CCCCCCccccccccccCCccCHHHHHHHHHH
Q 023020 106 GPI-FLYCGNEGDIEWFAV-NSGFVWDIAPRFGAMLVFPEHRY--YGE-SMPYGSTEVAYQNATTLSYLTAEQALADFAV 180 (288)
Q Consensus 106 ~pI-~l~~Ggeg~~~~~~~-~~~~~~~lA~~~g~~Vi~lEhRg--yG~-S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~ 180 (288)
-|| +++|||+-....... +......++...+..||.+.+|= .|- |. ++.. ...|+... |...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st--~d~~----~~gN~gl~-------Dq~~ 178 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLST--GDSA----APGNLGLF-------DQLL 178 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeec--CCCC----CCCcccHH-------HHHH
Confidence 464 557888632221000 00111233334467788888882 231 11 1100 12344443 4444
Q ss_pred HHHHHHH---hcCCCCCCEEEeecChhHHHHHHHHHh--cccccceeEEecCccc
Q 023020 181 FITNLKQ---NLSAEASPVVLFGGSYGGMLAAWMRLK--YPHIAIGALASSAPIL 230 (288)
Q Consensus 181 fi~~l~~---~~~~~~~~~il~G~SyGG~lAa~~~~k--yP~~v~g~vasSapv~ 230 (288)
-++.++. .++.+..++.++|||.||+.+..+... --++++.+|.-|+...
T Consensus 179 AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 179 ALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 4444443 344456799999999999998776531 1156777776665543
No 212
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=85.20 E-value=13 Score=34.42 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=64.5
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNL 185 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l 185 (288)
.|+|++||-...+.... ...+...+-+.-|..|+.+|. |=| . .+ +. +....+-+.-..+-+..+
T Consensus 24 ~P~ii~HGigd~c~~~~-~~~~~q~l~~~~g~~v~~lei-g~g--~--~~--------s~--l~pl~~Qv~~~ce~v~~m 87 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLS-MANLTQLLEELPGSPVYCLEI-GDG--I--KD--------SS--LMPLWEQVDVACEKVKQM 87 (296)
T ss_pred CCEEEEeccCcccccch-HHHHHHHHHhCCCCeeEEEEe-cCC--c--ch--------hh--hccHHHHHHHHHHHHhcc
Confidence 69999999776665421 122333334434888888884 222 1 11 01 122323222222222222
Q ss_pred HHhcCCCCCCEEEeecChhHHHHHHHHHhccc-ccceeEEecCccccccCCCC
Q 023020 186 KQNLSAEASPVVLFGGSYGGMLAAWMRLKYPH-IAIGALASSAPILQFEDIVP 237 (288)
Q Consensus 186 ~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~-~v~g~vasSapv~~~~~~~~ 237 (288)
++ + ..-+.++|-|-||.++..+.+.-|+ -|+-.|.-++|-.-+.++.+
T Consensus 88 ~~-l---sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~ 136 (296)
T KOG2541|consen 88 PE-L---SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPR 136 (296)
T ss_pred hh-c---cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCC
Confidence 21 1 2358999999999999999988775 47777777788765444443
No 213
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.71 E-value=2.5 Score=37.49 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhc
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKY 215 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ky 215 (288)
+-+-.|+..-.++.-+..+ .+.|+||.|||-|+++...+...+
T Consensus 74 ~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 4455666643333322332 356999999999999999987765
No 214
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.51 E-value=16 Score=33.65 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=59.2
Q ss_pred eEEEEEEEeccccCCCCCCccEEE-EeCCCCCchhhhhhcchHHHHHH----HhC--CEEEeeeccccccCCCCCCcccc
Q 023020 87 TFSQRYLINTDHWVGPNRLGPIFL-YCGNEGDIEWFAVNSGFVWDIAP----RFG--AMLVFPEHRYYGESMPYGSTEVA 159 (288)
Q Consensus 87 tf~qry~~~~~~~~~~~~~~pI~l-~~Ggeg~~~~~~~~~~~~~~lA~----~~g--~~Vi~lEhRgyG~S~P~~~~~~~ 159 (288)
.|.-.+|+.... ...++++ +.|++|.. |++.++|+ .++ ..+..+-|-+|-.- |..-.+.+
T Consensus 15 i~~~~~~v~~~~-----~~~~li~~IpGNPG~~-------gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~-P~sl~~~~ 81 (301)
T KOG3975|consen 15 ILTLKPWVTKSG-----EDKPLIVWIPGNPGLL-------GFYTEFARHLHLNLIDRLPVWTISHAGHALM-PASLREDH 81 (301)
T ss_pred ceeeeeeeccCC-----CCceEEEEecCCCCch-------hHHHHHHHHHHHhcccccceeEEeccccccC-Cccccccc
Confidence 456667765432 2356655 55667643 34444444 333 33666667776432 21110000
Q ss_pred ccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 160 YQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 160 ~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
+..|-.-.+.+.-+.--.+|++ ++-.++.+++++|||-|..+.+.+..
T Consensus 82 --s~~~~eifsL~~QV~HKlaFik----~~~Pk~~ki~iiGHSiGaYm~Lqil~ 129 (301)
T KOG3975|consen 82 --SHTNEEIFSLQDQVDHKLAFIK----EYVPKDRKIYIIGHSIGAYMVLQILP 129 (301)
T ss_pred --ccccccccchhhHHHHHHHHHH----HhCCCCCEEEEEecchhHHHHHHHhh
Confidence 1223334465555554445554 33356779999999999999888764
No 215
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=83.84 E-value=2.8 Score=37.10 Aligned_cols=56 Identities=29% Similarity=0.295 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCc
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAP 228 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSap 228 (288)
.++.+-++.+++.--. .+.+..++++-|-|+||++|++.+..||..+.|....++-
T Consensus 72 ~~aa~~i~~Li~~e~~-~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 72 HRAADNIANLIDNEPA-NGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHHHHHHHH-cCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 3444455555554332 2334457889999999999999999999988888765543
No 216
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=83.45 E-value=0.99 Score=45.88 Aligned_cols=87 Identities=22% Similarity=0.260 Sum_probs=61.3
Q ss_pred HhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHH
Q 023020 134 RFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRL 213 (288)
Q Consensus 134 ~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~ 213 (288)
+.|+.-+....||=|+=-|.=.. . - .-.+-+.+.+|..++.+.|..+--.+..++-+.|+|-||.|..-...
T Consensus 448 erGg~~v~ANIRGGGEfGp~WH~------A-a-~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alT 519 (648)
T COG1505 448 ERGGVFVLANIRGGGEFGPEWHQ------A-G-MKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALT 519 (648)
T ss_pred hcCCeEEEEecccCCccCHHHHH------H-H-hhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeec
Confidence 45888889999997765431000 0 0 01123568889999999887652123347889999999999999999
Q ss_pred hcccccceeEEecCcc
Q 023020 214 KYPHIAIGALASSAPI 229 (288)
Q Consensus 214 kyP~~v~g~vasSapv 229 (288)
.+||++.++|.-. |+
T Consensus 520 QrPelfgA~v~ev-Pl 534 (648)
T COG1505 520 QRPELFGAAVCEV-PL 534 (648)
T ss_pred cChhhhCceeecc-ch
Confidence 9999998887755 44
No 217
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=80.24 E-value=3.8 Score=38.92 Aligned_cols=71 Identities=28% Similarity=0.388 Sum_probs=52.0
Q ss_pred CCEEEeeecc-ccccCCCCCCccccccccccCCcc-CHHHHHHHHHHHHHHHHHhc-CCCCCCEEEeecChhHHHHHHHH
Q 023020 136 GAMLVFPEHR-YYGESMPYGSTEVAYQNATTLSYL-TAEQALADFAVFITNLKQNL-SAEASPVVLFGGSYGGMLAAWMR 212 (288)
Q Consensus 136 g~~Vi~lEhR-gyG~S~P~~~~~~~~~~~~~l~yl-t~~qal~Dl~~fi~~l~~~~-~~~~~~~il~G~SyGG~lAa~~~ 212 (288)
.+.++++|.+ |-|-|-..+.. .|- +.+|+..|+..+++.+-... .....|..+|-.||||-+|+.++
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~----------~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~a 140 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSS----------AYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFA 140 (414)
T ss_pred hccEEEecCCCcCceeeecCcc----------cccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhh
Confidence 4678888876 88888643321 233 37899999999988765422 23467999999999999999987
Q ss_pred Hhcc
Q 023020 213 LKYP 216 (288)
Q Consensus 213 ~kyP 216 (288)
+.--
T Consensus 141 l~l~ 144 (414)
T KOG1283|consen 141 LELD 144 (414)
T ss_pred hhHH
Confidence 6543
No 218
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=77.67 E-value=44 Score=30.84 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=52.3
Q ss_pred ccEEEEeCCCCC-chhhhhhcchHHHHHHHhCCEEEeeecccc-ccCCCCCCccccccccccCCccCHHHHHHHHHHHHH
Q 023020 106 GPIFLYCGNEGD-IEWFAVNSGFVWDIAPRFGAMLVFPEHRYY-GESMPYGSTEVAYQNATTLSYLTAEQALADFAVFIT 183 (288)
Q Consensus 106 ~pI~l~~Ggeg~-~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgy-G~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~ 183 (288)
.|.+++-.|-+. ...+ .|+...++ ..|+.|+-+|+-.| |.|.- . ..-+|++...+|+..+++
T Consensus 30 ~~tiliA~Gf~rrmdh~---agLA~YL~-~NGFhViRyDsl~HvGlSsG--~----------I~eftms~g~~sL~~V~d 93 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHF---AGLAEYLS-ANGFHVIRYDSLNHVGLSSG--D----------INEFTMSIGKASLLTVID 93 (294)
T ss_dssp S-EEEEE-TT-GGGGGG---HHHHHHHH-TTT--EEEE---B-------------------------HHHHHHHHHHHHH
T ss_pred CCeEEEecchhHHHHHH---HHHHHHHh-hCCeEEEeccccccccCCCC--C----------hhhcchHHhHHHHHHHHH
Confidence 455666554432 2221 23333333 35999999999988 88852 2 345789999999999999
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeEEecCccc
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPIL 230 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~vasSapv~ 230 (288)
+++.. + ..+.=++.-|..|-+|...+. .++ +.-+|...+.|.
T Consensus 94 wl~~~-g--~~~~GLIAaSLSaRIAy~Va~-~i~-lsfLitaVGVVn 135 (294)
T PF02273_consen 94 WLATR-G--IRRIGLIAASLSARIAYEVAA-DIN-LSFLITAVGVVN 135 (294)
T ss_dssp HHHHT-T-----EEEEEETTHHHHHHHHTT-TS---SEEEEES--S-
T ss_pred HHHhc-C--CCcchhhhhhhhHHHHHHHhh-ccC-cceEEEEeeeee
Confidence 99843 2 346889999999999998877 344 444555455554
No 219
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=77.01 E-value=9.5 Score=37.32 Aligned_cols=57 Identities=30% Similarity=0.388 Sum_probs=42.6
Q ss_pred HhCCEEEeeec-cccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHH
Q 023020 134 RFGAMLVFPEH-RYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAW 210 (288)
Q Consensus 134 ~~g~~Vi~lEh-RgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~ 210 (288)
+.|..||.+|- |||= |. -|.+|..+|+..++++-..+-+ ..+++|+|.|.|.=+--.
T Consensus 285 ~~gvpVvGvdsLRYfW-~~-----------------rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADvlP~ 342 (456)
T COG3946 285 KQGVPVVGVDSLRYFW-SE-----------------RTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADVLPF 342 (456)
T ss_pred HCCCceeeeehhhhhh-cc-----------------CCHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchhhHH
Confidence 35999999985 4443 21 2568999999999998876543 458999999999865433
No 220
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=76.11 E-value=55 Score=36.77 Aligned_cols=79 Identities=27% Similarity=0.365 Sum_probs=50.9
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHH-HHHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFA-VFIT 183 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~-~fi~ 183 (288)
+.|+||+|.-||.... ...+|.+. |-+-||.- ++++.- + +.+.|++ .+|+
T Consensus 2123 ~~~~Ffv~pIEG~tt~-------l~~la~rl-------e~PaYglQ-----------~T~~vP-~---dSies~A~~yir 2173 (2376)
T KOG1202|consen 2123 EPPLFFVHPIEGFTTA-------LESLASRL-------EIPAYGLQ-----------CTEAVP-L---DSIESLAAYYIR 2173 (2376)
T ss_pred CCceEEEeccccchHH-------HHHHHhhc-------CCcchhhh-----------ccccCC-c---chHHHHHHHHHH
Confidence 4789999998875543 45677653 45566642 222221 1 2455555 5677
Q ss_pred HHHHhcCCCCCCEEEeecChhHHHHHHHHHh
Q 023020 184 NLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 184 ~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k 214 (288)
.+++- .+..|.-+.|.|||..++-.++..
T Consensus 2174 qirkv--QP~GPYrl~GYSyG~~l~f~ma~~ 2202 (2376)
T KOG1202|consen 2174 QIRKV--QPEGPYRLAGYSYGACLAFEMASQ 2202 (2376)
T ss_pred HHHhc--CCCCCeeeeccchhHHHHHHHHHH
Confidence 77653 245699999999999999877643
No 221
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.31 E-value=3 Score=38.69 Aligned_cols=121 Identities=18% Similarity=0.183 Sum_probs=64.2
Q ss_pred CCeEEEEEEEeccccCCCCCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccc
Q 023020 85 LPTFSQRYLINTDHWVGPNRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNAT 164 (288)
Q Consensus 85 ~~tf~qry~~~~~~~~~~~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~ 164 (288)
.+|=.-|+++-. +-+|+-+...+.|+-..+.- --+-..+-+ .+..-+.+|-+|||+-.|.... ..
T Consensus 99 ~~~A~~~~liPQ-------K~~~KOG~~a~tgdh~y~rr-~~L~~p~~k-~~i~tmvle~pfYgqr~p~~q~------~~ 163 (371)
T KOG1551|consen 99 SRTARVAWLIPQ-------KMADLCLSWALTGDHVYTRR-LVLSKPINK-REIATMVLEKPFYGQRVPEEQI------IH 163 (371)
T ss_pred ccceeeeeeccc-------CcCCeeEEEeecCCceeEee-eeecCchhh-hcchheeeecccccccCCHHHH------HH
Confidence 355555555532 22577666655554432110 001123333 3667788999999999874421 12
Q ss_pred cCCccC--HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccc
Q 023020 165 TLSYLT--AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAI 220 (288)
Q Consensus 165 ~l~ylt--~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~ 220 (288)
.|.|.| +---.+-++++.+.+.-.....-.|.-++|-||||-+|...-..+|.-|.
T Consensus 164 ~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva 221 (371)
T KOG1551|consen 164 MLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVA 221 (371)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCcc
Confidence 223332 00111122333332221111122488999999999999999987776543
No 222
>PLN02748 tRNA dimethylallyltransferase
Probab=71.62 E-value=18 Score=36.04 Aligned_cols=87 Identities=15% Similarity=0.171 Sum_probs=55.1
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeee--ccccccCC----CCCCc-------cccccccccCCccCH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPE--HRYYGESM----PYGST-------EVAYQNATTLSYLTA 171 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lE--hRgyG~S~----P~~~~-------~~~~~~~~~l~ylt~ 171 (288)
+++|+++.|--|+... .+...||+.+++.||..| +-|=|... |.... ..++.+ --..+|+
T Consensus 21 ~~~~i~i~GptgsGKs-----~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~--p~e~ysv 93 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS-----KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVIS--PSVEFTA 93 (468)
T ss_pred CCCEEEEECCCCCCHH-----HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecC--CCCcCcH
Confidence 3678888886665543 456789999999999999 44555432 21100 000001 1145678
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEeecC
Q 023020 172 EQALADFAVFITNLKQNLSAEASPVVLFGGS 202 (288)
Q Consensus 172 ~qal~Dl~~fi~~l~~~~~~~~~~~il~G~S 202 (288)
.+...|....|+.+..+ +...|++|||
T Consensus 94 ~~F~~~A~~~I~~I~~r----gk~PIlVGGT 120 (468)
T PLN02748 94 KDFRDHAVPLIEEILSR----NGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHHHhc----CCCeEEEcCh
Confidence 88888888888887654 3456888886
No 223
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=71.35 E-value=16 Score=36.54 Aligned_cols=94 Identities=24% Similarity=0.356 Sum_probs=58.8
Q ss_pred CCCccEEEEeCCCCCchhhhhhcchHHHHHHHhCC-EEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHH
Q 023020 103 NRLGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGA-MLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVF 181 (288)
Q Consensus 103 ~~~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~-~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~f 181 (288)
+-+.|+.+|-.|-=.++.+- | .-+-+.+|+ -+++-|.|=-|-+- |+.++..=.-+...
T Consensus 286 D~KPPL~VYFSGyR~aEGFE---g--y~MMk~Lg~PfLL~~DpRleGGaF----------------YlGs~eyE~~I~~~ 344 (511)
T TIGR03712 286 DFKPPLNVYFSGYRPAEGFE---G--YFMMKRLGAPFLLIGDPRLEGGAF----------------YLGSDEYEQGIINV 344 (511)
T ss_pred CCCCCeEEeeccCcccCcch---h--HHHHHhcCCCeEEeecccccccee----------------eeCcHHHHHHHHHH
Confidence 34678777665544455432 2 234455666 35667888777553 33333333344455
Q ss_pred HHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh-ccc
Q 023020 182 ITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK-YPH 217 (288)
Q Consensus 182 i~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k-yP~ 217 (288)
|+.--..++.+....||.|-|||..=|+++..+ .|+
T Consensus 345 I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 345 IQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 555545566677789999999999999999766 554
No 224
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=69.86 E-value=25 Score=33.02 Aligned_cols=88 Identities=13% Similarity=0.232 Sum_probs=48.6
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc--ccccCC----CCCCcccc----ccc-cccCCccCHHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YYGESM----PYGSTEVA----YQN-ATTLSYLTAEQA 174 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR--gyG~S~----P~~~~~~~----~~~-~~~l~ylt~~qa 174 (288)
.+++++.|.-|+... .+...||+++++.+|..|.+ |.|.+. |....... +-+ .+--..++..+.
T Consensus 4 ~~~i~i~GptgsGKt-----~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f 78 (307)
T PRK00091 4 PKVIVIVGPTASGKT-----ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADF 78 (307)
T ss_pred ceEEEEECCCCcCHH-----HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHH
Confidence 468888887665543 45678999999999999985 445443 21110000 000 000123456666
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEeecC
Q 023020 175 LADFAVFITNLKQNLSAEASPVVLFGGS 202 (288)
Q Consensus 175 l~Dl~~fi~~l~~~~~~~~~~~il~G~S 202 (288)
+.|....++.+..+ +...|++|||
T Consensus 79 ~~~a~~~i~~i~~~----gk~pIlvGGt 102 (307)
T PRK00091 79 QRDALAAIADILAR----GKLPILVGGT 102 (307)
T ss_pred HHHHHHHHHHHHhC----CCCEEEECcH
Confidence 67766666655432 2345666653
No 225
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=66.52 E-value=18 Score=32.41 Aligned_cols=46 Identities=24% Similarity=0.289 Sum_probs=27.8
Q ss_pred cCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHh
Q 023020 169 LTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 169 lt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~k 214 (288)
++.++++++=+.-+...-......+.+++++|.|.|+.++.....+
T Consensus 23 ~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 23 PTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 3455555554433333222211246799999999999999776544
No 226
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=66.01 E-value=70 Score=28.10 Aligned_cols=103 Identities=17% Similarity=0.104 Sum_probs=54.4
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLK 186 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~ 186 (288)
|++++.|-.|...... .-+.++-++-|+.++.+-.+.--...|. -....+++.+... +.
T Consensus 1 plvvl~gW~gA~~~hl---~KY~~~Y~~~g~~il~~~~~~~~~~~~~---------------~~~~~~~~~l~~~---l~ 59 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHL---AKYSDLYQDPGFDILLVTSPPADFFWPS---------------KRLAPAADKLLEL---LS 59 (240)
T ss_pred CEEEEEeCCCCCHHHH---HHHHHHHHhcCCeEEEEeCCHHHHeeec---------------cchHHHHHHHHHH---hh
Confidence 6888888665443221 1122333335888887654433222221 1123343333333 33
Q ss_pred HhcCCCCCCEEEeecChhHHHHHHHHH---------hccc-ccceeEEecCccc
Q 023020 187 QNLSAEASPVVLFGGSYGGMLAAWMRL---------KYPH-IAIGALASSAPIL 230 (288)
Q Consensus 187 ~~~~~~~~~~il~G~SyGG~lAa~~~~---------kyP~-~v~g~vasSapv~ 230 (288)
........++++-..|.||......-. ..+- .+.|.|.-|+|-.
T Consensus 60 ~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 60 DSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred hhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCc
Confidence 221111138999999998877765533 1111 2899999999964
No 227
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=62.55 E-value=18 Score=34.58 Aligned_cols=40 Identities=23% Similarity=0.352 Sum_probs=28.8
Q ss_pred CCCCEEEeecChhHHHHHHHHHhcc-----cccceeEEecCcccc
Q 023020 192 EASPVVLFGGSYGGMLAAWMRLKYP-----HIAIGALASSAPILQ 231 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~~kyP-----~~v~g~vasSapv~~ 231 (288)
.+.|+.|+|||+|+-+--...+.-+ ..|.-+++.++|+..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 3569999999999987654433322 357888888899853
No 228
>PLN02840 tRNA dimethylallyltransferase
Probab=61.07 E-value=48 Score=32.68 Aligned_cols=88 Identities=13% Similarity=0.172 Sum_probs=52.9
Q ss_pred CccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc--ccc----cCCCCCCcccc-----c-cccccCCccCHH
Q 023020 105 LGPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YYG----ESMPYGSTEVA-----Y-QNATTLSYLTAE 172 (288)
Q Consensus 105 ~~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR--gyG----~S~P~~~~~~~-----~-~~~~~l~ylt~~ 172 (288)
..+++++.|..|+... .+...||+++++.+|..|-. |.| -..|.... .. + --.+.-..+|+.
T Consensus 20 ~~~vi~I~GptgsGKT-----tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE-~~~V~Hhlidil~p~e~ySv~ 93 (421)
T PLN02840 20 KEKVIVISGPTGAGKS-----RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSE-RKEVPHHLIDILHPSDDYSVG 93 (421)
T ss_pred CCeEEEEECCCCCCHH-----HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHH-HcCCCeEeEeecCCCCceeHH
Confidence 3567778887665543 45678999999999999963 233 22332110 00 0 000111345778
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEeecC
Q 023020 173 QALADFAVFITNLKQNLSAEASPVVLFGGS 202 (288)
Q Consensus 173 qal~Dl~~fi~~l~~~~~~~~~~~il~G~S 202 (288)
+...|....++.+..+ +...|++||+
T Consensus 94 ~F~~~A~~~I~~i~~r----gkiPIvVGGT 119 (421)
T PLN02840 94 AFFDDARRATQDILNR----GRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHHHhc----CCCEEEEcCc
Confidence 8888888888877653 3345888886
No 229
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=60.23 E-value=41 Score=31.73 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=51.2
Q ss_pred cEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc--ccccC----CCCCCcccc-----ccccccCCccCHHHHH
Q 023020 107 PIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YYGES----MPYGSTEVA-----YQNATTLSYLTAEQAL 175 (288)
Q Consensus 107 pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR--gyG~S----~P~~~~~~~-----~~~~~~l~ylt~~qal 175 (288)
+++++.|=-++.. +.+..+||+++|+-||..|-. |-|.. +|....-.+ +--.+--..+|+.+..
T Consensus 4 ~~i~I~GPTAsGK-----T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~ 78 (308)
T COG0324 4 KLIVIAGPTASGK-----TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQ 78 (308)
T ss_pred cEEEEECCCCcCH-----HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHH
Confidence 5666766333222 245679999999999999964 33432 331110000 0000111356777888
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEeecChh
Q 023020 176 ADFAVFITNLKQNLSAEASPVVLFGGSYG 204 (288)
Q Consensus 176 ~Dl~~fi~~l~~~~~~~~~~~il~G~SyG 204 (288)
.|+...++.+..+ +...|++|||+-
T Consensus 79 ~~a~~~i~~i~~r----gk~pIlVGGTgl 103 (308)
T COG0324 79 RDALAAIDDILAR----GKLPILVGGTGL 103 (308)
T ss_pred HHHHHHHHHHHhC----CCCcEEEccHHH
Confidence 8888888777653 335688998753
No 230
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=55.64 E-value=48 Score=30.88 Aligned_cols=87 Identities=13% Similarity=0.116 Sum_probs=48.7
Q ss_pred EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc--ccccCC----CCCCcccc----cc-ccccCCccCHHHHHH
Q 023020 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YYGESM----PYGSTEVA----YQ-NATTLSYLTAEQALA 176 (288)
Q Consensus 108 I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR--gyG~S~----P~~~~~~~----~~-~~~~l~ylt~~qal~ 176 (288)
|+++.|-.|+... .+...||+++++.+|..|-+ |-|.+. |....... +- ..+--..++..+...
T Consensus 1 vi~i~G~t~~GKs-----~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~ 75 (287)
T TIGR00174 1 VIFIMGPTAVGKS-----QLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQT 75 (287)
T ss_pred CEEEECCCCCCHH-----HHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHH
Confidence 4566675554432 35678999999999999974 334332 32110000 00 001113456667777
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEeecCh
Q 023020 177 DFAVFITNLKQNLSAEASPVVLFGGSY 203 (288)
Q Consensus 177 Dl~~fi~~l~~~~~~~~~~~il~G~Sy 203 (288)
+....++.+..+ +...|++|||.
T Consensus 76 ~a~~~i~~~~~~----g~~pi~vGGTg 98 (287)
T TIGR00174 76 LALNAIADITAR----GKIPLLVGGTG 98 (287)
T ss_pred HHHHHHHHHHhC----CCCEEEEcCcH
Confidence 777777766543 34568899873
No 231
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=52.30 E-value=7 Score=35.30 Aligned_cols=90 Identities=13% Similarity=0.196 Sum_probs=59.7
Q ss_pred HHHHHHHhCCEEEeeeccccccCCCCCCccccccccccCCccCHHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHH
Q 023020 128 VWDIAPRFGAMLVFPEHRYYGESMPYGSTEVAYQNATTLSYLTAEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGML 207 (288)
Q Consensus 128 ~~~lA~~~g~~Vi~lEhRgyG~S~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~l 207 (288)
...+|.. |+.|+.+|.- -| .|...........+-++-++.+-...|+..+++.++... ...++=++|--+||.+
T Consensus 60 Adk~A~~-Gy~v~vPD~~-~G--dp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~ 133 (242)
T KOG3043|consen 60 ADKVALN-GYTVLVPDFF-RG--DPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKV 133 (242)
T ss_pred HHHHhcC-CcEEEcchhh-cC--CCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceE
Confidence 3445543 9999999962 23 221110000001233456678888999999999999542 3458889999999999
Q ss_pred HHHHHHhcccccceeEE
Q 023020 208 AAWMRLKYPHIAIGALA 224 (288)
Q Consensus 208 Aa~~~~kyP~~v~g~va 224 (288)
+..+-.++|+ +.+++.
T Consensus 134 vv~~~~~~~~-f~a~v~ 149 (242)
T KOG3043|consen 134 VVTLSAKDPE-FDAGVS 149 (242)
T ss_pred EEEeeccchh-heeeeE
Confidence 9999999994 555543
No 232
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.06 E-value=22 Score=36.56 Aligned_cols=39 Identities=33% Similarity=0.500 Sum_probs=27.3
Q ss_pred CCCCEEEeecChhHHHHHHHHHh-----ccc------ccceeEEecCccc
Q 023020 192 EASPVVLFGGSYGGMLAAWMRLK-----YPH------IAIGALASSAPIL 230 (288)
Q Consensus 192 ~~~~~il~G~SyGG~lAa~~~~k-----yP~------~v~g~vasSapv~ 230 (288)
.+.|++-+||||||.++-.+.++ .|+ -..|.+..+-|..
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred CCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 35689999999999998766543 244 2456776666654
No 233
>PRK08118 topology modulation protein; Reviewed
Probab=48.32 E-value=94 Score=26.05 Aligned_cols=35 Identities=6% Similarity=0.193 Sum_probs=26.7
Q ss_pred EEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeeccccc
Q 023020 109 FLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHRYYG 148 (288)
Q Consensus 109 ~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhRgyG 148 (288)
++++|..|+... .+...|++..|..++-+|...+.
T Consensus 4 I~I~G~~GsGKS-----Tlak~L~~~l~~~~~~lD~l~~~ 38 (167)
T PRK08118 4 IILIGSGGSGKS-----TLARQLGEKLNIPVHHLDALFWK 38 (167)
T ss_pred EEEECCCCCCHH-----HHHHHHHHHhCCCceecchhhcc
Confidence 677887766543 45678999999999999987764
No 234
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=48.21 E-value=50 Score=34.20 Aligned_cols=63 Identities=14% Similarity=0.150 Sum_probs=45.1
Q ss_pred cCHHHHHHHHHHHHHHHHHhc--CCCCCCEEEeecChhHHHHHHHHHhcc-cccceeEEecCcccc
Q 023020 169 LTAEQALADFAVFITNLKQNL--SAEASPVVLFGGSYGGMLAAWMRLKYP-HIAIGALASSAPILQ 231 (288)
Q Consensus 169 lt~~qal~Dl~~fi~~l~~~~--~~~~~~~il~G~SyGG~lAa~~~~kyP-~~v~g~vasSapv~~ 231 (288)
.++.++++-+..|.++...+. ..+..++||+|-|||..++.......- ..|.++|..+=|+..
T Consensus 223 ~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~ 288 (784)
T KOG3253|consen 223 ANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT 288 (784)
T ss_pred cchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccC
Confidence 467788888888877544332 245679999999999888877654433 347888887777654
No 235
>PLN02165 adenylate isopentenyltransferase
Probab=46.19 E-value=92 Score=29.72 Aligned_cols=89 Identities=17% Similarity=0.228 Sum_probs=48.1
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc--ccccCCCCCCcccc-ccc---------cccCCccCHHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YYGESMPYGSTEVA-YQN---------ATTLSYLTAEQ 173 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR--gyG~S~P~~~~~~~-~~~---------~~~l~ylt~~q 173 (288)
++++++.|-.|+... .+...||+.+++.++..|-+ |-|....+...+.. ... .......+..+
T Consensus 43 g~iivIiGPTGSGKS-----tLA~~LA~~l~~eIIsaDs~QvYkgldIgTakpt~~er~gv~Hhli~~~~~~~~~~sv~~ 117 (334)
T PLN02165 43 DKVVVIMGATGSGKS-----RLSVDLATRFPSEIINSDKMQVYDGLKITTNQITIQDRRGVPHHLLGELNPDDGELTASE 117 (334)
T ss_pred CCEEEEECCCCCcHH-----HHHHHHHHHcCCceecCChheeECCcccccCCCCHHHHcCCChhhhheeccccceeeHHH
Confidence 568888886665543 35668999989888888876 33444311110000 000 00111234445
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEeecCh
Q 023020 174 ALADFAVFITNLKQNLSAEASPVVLFGGSY 203 (288)
Q Consensus 174 al~Dl~~fi~~l~~~~~~~~~~~il~G~Sy 203 (288)
...+....++.+..+ +...|++|||.
T Consensus 118 F~~~a~~~I~~i~~~----~~~PI~vGGTg 143 (334)
T PLN02165 118 FRSLASLSISEITSR----QKLPIVAGGSN 143 (334)
T ss_pred HHHHHHHHHHHHHHC----CCcEEEECChH
Confidence 555555555554432 34678888875
No 236
>PF03283 PAE: Pectinacetylesterase
Probab=43.79 E-value=1.1e+02 Score=29.28 Aligned_cols=50 Identities=30% Similarity=0.378 Sum_probs=28.8
Q ss_pred HHHHHHHHh-cCCCCCCEEEeecChhHHHHH----HHHHhcccccceeE-EecCccc
Q 023020 180 VFITNLKQN-LSAEASPVVLFGGSYGGMLAA----WMRLKYPHIAIGAL-ASSAPIL 230 (288)
Q Consensus 180 ~fi~~l~~~-~~~~~~~~il~G~SyGG~lAa----~~~~kyP~~v~g~v-asSapv~ 230 (288)
++++.+..+ +. ...+++|.|.|-||.=+. +++..+|..+.-.. .-|+...
T Consensus 142 avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 142 AVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred HHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 444555444 22 124788888888886553 45778886444333 3355654
No 237
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=42.15 E-value=28 Score=29.43 Aligned_cols=42 Identities=24% Similarity=0.291 Sum_probs=28.6
Q ss_pred cCCccCHHHHHHHHHHHHHHHHHhcCC--CCCCEEEeecChhHH
Q 023020 165 TLSYLTAEQALADFAVFITNLKQNLSA--EASPVVLFGGSYGGM 206 (288)
Q Consensus 165 ~l~ylt~~qal~Dl~~fi~~l~~~~~~--~~~~~il~G~SyGG~ 206 (288)
.+.-.+.++...=+..|-+.++.++.. ...++.|+|+|++..
T Consensus 73 ~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 73 TLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 455667777777777777888866532 234899999999887
No 238
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=40.42 E-value=24 Score=25.17 Aligned_cols=18 Identities=17% Similarity=0.230 Sum_probs=8.5
Q ss_pred CCccEEEEeCCCCCchhh
Q 023020 104 RLGPIFLYCGNEGDIEWF 121 (288)
Q Consensus 104 ~~~pI~l~~Ggeg~~~~~ 121 (288)
++.||||.||-.++...|
T Consensus 42 ~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp T--EEEEE--TT--GGGG
T ss_pred CCCcEEEECCcccChHHH
Confidence 356788899987766554
No 239
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=39.92 E-value=2e+02 Score=26.95 Aligned_cols=85 Identities=14% Similarity=0.177 Sum_probs=50.3
Q ss_pred ccEEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeecc--cc----ccCCCCCCc-------cccccccccCCccCHH
Q 023020 106 GPIFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEHR--YY----GESMPYGST-------EVAYQNATTLSYLTAE 172 (288)
Q Consensus 106 ~pI~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEhR--gy----G~S~P~~~~-------~~~~~~~~~l~ylt~~ 172 (288)
.+|+++.|--++..+ .+..+||++ ++-+|..|-+ |= |-..|.... -.++ .+--..+|+.
T Consensus 4 ~~ii~I~GpTasGKS-----~LAl~LA~~-~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~--~~p~e~~sv~ 75 (300)
T PRK14729 4 NKIVFIFGPTAVGKS-----NILFHFPKG-KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDF--LEPIKEYNLG 75 (300)
T ss_pred CcEEEEECCCccCHH-----HHHHHHHHh-CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeec--cCCCCceeHH
Confidence 468888885544432 456789988 5689999965 22 333332110 0000 0111345777
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEeecC
Q 023020 173 QALADFAVFITNLKQNLSAEASPVVLFGGS 202 (288)
Q Consensus 173 qal~Dl~~fi~~l~~~~~~~~~~~il~G~S 202 (288)
+...|....++.+..+ +...|++|||
T Consensus 76 ~f~~~a~~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 76 IFYKEALKIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHHHHHHHC----CCCEEEEeCc
Confidence 8888888888877543 3456888886
No 240
>PF02419 PsbL: PsbL protein; InterPro: IPR003372 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbL found in PSII. PsbL is located in a gene cluster with PsbE, PsbF and PsbJ (PsbEFJL). Both PsbL and PsbJ (IPR002682 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbL prevent the formation of both PSII core dimers and PSII-light harvesting complex []. In addition, both PsbL and PsbJ are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_L 3A0B_l 3ARC_l 1S5L_l 2AXT_l 3BZ2_L 4FBY_L 3PRQ_L 3PRR_L 3KZI_L ....
Probab=34.54 E-value=48 Score=21.12 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=15.2
Q ss_pred cccchhhhHHHHHHHHHHHHH
Q 023020 8 NQNSLYLSPVITIVIISILSP 28 (288)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ 28 (288)
|.-||||.+++++++-.+++.
T Consensus 13 NRTSLY~GLllifvl~vLFss 33 (37)
T PF02419_consen 13 NRTSLYWGLLLIFVLAVLFSS 33 (37)
T ss_dssp -CCHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHhhh
Confidence 456999999988876666543
No 241
>PRK00753 psbL photosystem II reaction center L; Provisional
Probab=33.24 E-value=46 Score=21.34 Aligned_cols=20 Identities=35% Similarity=0.574 Sum_probs=15.2
Q ss_pred cccchhhhHHHHHHHHHHHH
Q 023020 8 NQNSLYLSPVITIVIISILS 27 (288)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (288)
|.-||||-+++++++-.+++
T Consensus 15 NRTSLy~GlLlifvl~vLFs 34 (39)
T PRK00753 15 NRTSLYLGLLLVFVLGILFS 34 (39)
T ss_pred chhhHHHHHHHHHHHHHHHH
Confidence 45699999998887666554
No 242
>CHL00038 psbL photosystem II protein L
Probab=32.71 E-value=45 Score=21.29 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=15.5
Q ss_pred cccchhhhHHHHHHHHHHHHH
Q 023020 8 NQNSLYLSPVITIVIISILSP 28 (288)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ 28 (288)
|.-||||-+++++++-.+++.
T Consensus 14 NRTSLy~GLLlifvl~vlfss 34 (38)
T CHL00038 14 NRTSLYWGLLLIFVLAVLFSN 34 (38)
T ss_pred hhhhHHHHHHHHHHHHHHHHH
Confidence 456999999988876665543
No 243
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=32.01 E-value=24 Score=29.52 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=17.5
Q ss_pred cChhHHHHHHHHHhcccccc
Q 023020 201 GSYGGMLAAWMRLKYPHIAI 220 (288)
Q Consensus 201 ~SyGG~lAa~~~~kyP~~v~ 220 (288)
+.||+.+|..++.+||+...
T Consensus 29 g~mG~GIA~~~k~~~P~~~~ 48 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQILE 48 (154)
T ss_pred CcCChHHHHHHHHHcChHHH
Confidence 69999999999999997543
No 244
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=28.39 E-value=1.6e+02 Score=24.78 Aligned_cols=49 Identities=16% Similarity=0.112 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEeecChhHHHHHHHHHhcccccceeE
Q 023020 171 AEQALADFAVFITNLKQNLSAEASPVVLFGGSYGGMLAAWMRLKYPHIAIGAL 223 (288)
Q Consensus 171 ~~qal~Dl~~fi~~l~~~~~~~~~~~il~G~SyGG~lAa~~~~kyP~~v~g~v 223 (288)
+++..+++..+++.++.+ ..++.++|.|-.|..-+.+.-.-++.+..++
T Consensus 50 ~~~~~~~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 566777777777777654 4589999999999987777665566665554
No 245
>PRK02399 hypothetical protein; Provisional
Probab=27.81 E-value=3e+02 Score=27.09 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=40.1
Q ss_pred CEEEeecChhHHHHHHHHHhcccccceeEEe---cCccccccCCCChhhHHHHHHHHhhhcCcchHHHHHHHHHHHH
Q 023020 195 PVVLFGGSYGGMLAAWMRLKYPHIAIGALAS---SAPILQFEDIVPPETFYNIVSSDFKRESASCFNTIKESWGELV 268 (288)
Q Consensus 195 ~~il~G~SyGG~lAa~~~~kyP~~v~g~vas---Sapv~~~~~~~~~~~y~~~v~~~~~~~~~~C~~~i~~~~~~i~ 268 (288)
=+|-+|||.|..|++-..+.-|=-+=.++.| |.++.......|-.-.+.++. +.+.+.-|...+.+|-..|-
T Consensus 98 gviglGGs~GT~lat~aMr~LPiG~PKlmVSTmAsg~~~~yvg~sDI~mm~SV~D--iaGlN~isr~vl~NAA~aia 172 (406)
T PRK02399 98 GVIGLGGSGGTALATPAMRALPIGVPKLMVSTMASGDVSPYVGASDIAMMYSVTD--IAGLNRISRQVLSNAAGAIA 172 (406)
T ss_pred EEEEecCcchHHHHHHHHHhCCCCCCeEEEEccccCCCcCccccCCEEEeccccc--cccchHHHHHHHHHHHHHHH
Confidence 5889999999999999887777555444443 445443322222111122211 22334445556665555553
No 246
>PF03489 SapB_2: Saposin-like type B, region 2; InterPro: IPR008138 Saposins are small lysosomal proteins that serve as activators of various lysosomal lipid-degrading enzymes []. They probably act by isolating the lipid substrate from the membrane surroundings, thus making it more accessible to the soluble degradative enzymes. All mammalian saposins are synthesized as a single precursor molecule (prosaposin) which contains four Saposin-B domains, yielding the active saposins after proteolytic cleavage, and two Saposin-A domains that are removed in the activation reaction. The Saposin-B domains also occur in other proteins, many of them active in the lysis of membranes [, ].; PDB: 3BQQ_A 2RB3_B 2R0R_A 3BQP_A 2R1Q_A 1NKL_A 1L9L_A 1QDM_C 3RFI_A 4DDJ_A ....
Probab=27.79 E-value=1.4e+02 Score=17.92 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=27.3
Q ss_pred cchHHHHHHHHHHHHHHhcCcccHHHHHHhcCCC
Q 023020 254 ASCFNTIKESWGELVSVGQKENGLLELTKTFHLC 287 (288)
Q Consensus 254 ~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~f~~C 287 (288)
..|..-+..-...|-+++.+....+.+-...++|
T Consensus 2 ~~C~~~V~~y~~~ii~~l~~~~~p~~iC~~i~~C 35 (35)
T PF03489_consen 2 DECKNFVDQYGPQIIQLLEKQLDPQQICTKIGLC 35 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTHHHHHHHTTSS
T ss_pred cHHHHHHHHHHHHHHHHHHhcCChHHHHHHcCCC
Confidence 3588888888888888887777788888888888
No 247
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=24.07 E-value=6.5e+02 Score=24.17 Aligned_cols=122 Identities=18% Similarity=0.193 Sum_probs=63.8
Q ss_pred CCEEEeeecccc-ccC-CCCCCccccccccccCCccCHHHHHHHHHHHHHH-HHHhcCCCC-CCEEEeecChhHHHHHHH
Q 023020 136 GAMLVFPEHRYY-GES-MPYGSTEVAYQNATTLSYLTAEQALADFAVFITN-LKQNLSAEA-SPVVLFGGSYGGMLAAWM 211 (288)
Q Consensus 136 g~~Vi~lEhRgy-G~S-~P~~~~~~~~~~~~~l~ylt~~qal~Dl~~fi~~-l~~~~~~~~-~~~il~G~SyGG~lAa~~ 211 (288)
.-.+|++|-..= |.. .+ -|.++ +.+...+++. +...+.... .--||+|||---.-+..+
T Consensus 168 ~~~vIAYEPvWAIGTgg~~----------------as~~~-~~~~~~~Ir~~l~~~~~~~~~~v~ILYGGSV~~~N~~~l 230 (355)
T PRK14905 168 PHLFIAYEPVWAIGEGGIP----------------ASAEY-ADEKHAIIKQCLFELFAEESKKIPVLYGGSVNLENANEL 230 (355)
T ss_pred CceEEEECChHHhCCCCCC----------------CCHHH-HHHHHHHHHHHHHHHhccccCceeEEEeCcCCHHHHHHH
Confidence 347899998743 421 11 12333 3444555554 343332211 225999999988888877
Q ss_pred HHhcccccceeEEecCccccccCCCChhhHHHHHHHHhhhc-CcchHHHHHHHHHHHHHHhcCcccHHHHHHh
Q 023020 212 RLKYPHIAIGALASSAPILQFEDIVPPETFYNIVSSDFKRE-SASCFNTIKESWGELVSVGQKENGLLELTKT 283 (288)
Q Consensus 212 ~~kyP~~v~g~vasSapv~~~~~~~~~~~y~~~v~~~~~~~-~~~C~~~i~~~~~~i~~l~~~~~~~~~l~~~ 283 (288)
.. -|+ ++|+...+|-+. ...|.+.+....... +.+-...|++--+...+++..-.|.+.+...
T Consensus 231 ~~-~~~-iDG~LVG~asl~-------~~~f~~Ii~~~~~~~~~~~~~~~~~~~~~~a~~ii~~lGG~~NI~~v 294 (355)
T PRK14905 231 IM-KPH-IDGLFIGRSAWD-------AQCFHALIADALKALAGSKIDPIIHKFSEIAIQLIDHLGGKDNISAL 294 (355)
T ss_pred hc-CCC-CCEEEechhhcc-------HHHHHHHHHHHHHhccCCcccHHHHhHHHHHHHHHHHhCCHHhhccc
Confidence 54 454 899988777764 234555554332222 2223333343222334444444566655543
No 248
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=22.02 E-value=2.2e+02 Score=29.52 Aligned_cols=17 Identities=18% Similarity=0.393 Sum_probs=12.8
Q ss_pred CCEEEeec------ChhHHHHHH
Q 023020 194 SPVVLFGG------SYGGMLAAW 210 (288)
Q Consensus 194 ~~~il~G~------SyGG~lAa~ 210 (288)
.+|+++|| +.|+++++.
T Consensus 338 d~VfImGHk~pDmDalGsAig~~ 360 (655)
T COG3887 338 DNVFIMGHKFPDMDALGSAIGMQ 360 (655)
T ss_pred CcEEEEccCCCChHHHHHHHHHH
Confidence 48999999 456666655
No 249
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=21.46 E-value=1.3e+02 Score=22.98 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=25.0
Q ss_pred EEEEeCCCCCchhhhhhcchHHHHHHHhCCEEEeeec
Q 023020 108 IFLYCGNEGDIEWFAVNSGFVWDIAPRFGAMLVFPEH 144 (288)
Q Consensus 108 I~l~~Ggeg~~~~~~~~~~~~~~lA~~~g~~Vi~lEh 144 (288)
||++.|-.|+..+ .+...||+++|+.++..|.
T Consensus 1 vI~I~G~~gsGKS-----T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS-----TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH-----HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH-----HHHHHHHHHHCCeEEEecc
Confidence 5777887776543 4567899989999999999
No 250
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=21.42 E-value=88 Score=26.01 Aligned_cols=20 Identities=35% Similarity=0.494 Sum_probs=17.5
Q ss_pred CEEEeecChhHHHHHHHHHh
Q 023020 195 PVVLFGGSYGGMLAAWMRLK 214 (288)
Q Consensus 195 ~~il~G~SyGG~lAa~~~~k 214 (288)
+++++|++++|+.|+....+
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~ 20 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELAR 20 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHH
T ss_pred CEEEEecHHHHHHHHHHHhc
Confidence 47999999999999998773
No 251
>PF08874 DUF1835: Domain of unknown function (DUF1835); InterPro: IPR014973 This group of proteins are functionally uncharacterised.
Probab=21.02 E-value=4.1e+02 Score=20.70 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=24.9
Q ss_pred EEeecChhHHHHHHHHHh-ccccccee--EEecCcccc
Q 023020 197 VLFGGSYGGMLAAWMRLK-YPHIAIGA--LASSAPILQ 231 (288)
Q Consensus 197 il~G~SyGG~lAa~~~~k-yP~~v~g~--vasSapv~~ 231 (288)
|++|.|-+|.|-..+++. .++.|... .+|-+|+..
T Consensus 3 I~~g~s~a~sLk~a~~~~g~~~~Vi~~~d~lsiGPi~~ 40 (124)
T PF08874_consen 3 IVFGDSAAGSLKQALKQSGFEGDVICFRDDLSIGPISD 40 (124)
T ss_pred EecCcchHHHHHHHHHhcCCCCcEEEEeCCCcccCCCC
Confidence 789999999999988653 44444444 255688864
Done!