Query 023021
Match_columns 288
No_of_seqs 159 out of 2001
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 14:58:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 6.8E-55 2.3E-59 394.0 17.1 256 30-286 38-293 (304)
2 3iyz_A Aquaporin-4; water tran 100.0 4.2E-50 1.4E-54 364.8 23.5 246 29-284 23-273 (340)
3 3gd8_A Aquaporin-4; proton exc 100.0 1.1E-49 3.7E-54 346.9 20.2 221 51-281 2-222 (223)
4 3llq_A Aquaporin Z 2; aquapori 100.0 2.1E-49 7.1E-54 350.2 18.6 223 50-281 27-254 (256)
5 1j4n_A Aquaporin 1; membrane p 100.0 1.3E-48 4.5E-53 349.2 23.5 230 45-283 3-236 (271)
6 2zz9_A Aquaporin-4; water tran 100.0 7.2E-49 2.5E-53 353.9 21.3 229 46-284 6-234 (301)
7 2b6o_A Aquaporin-0, lens fiber 100.0 5E-48 1.7E-52 344.0 24.6 225 46-284 3-227 (263)
8 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 2.6E-48 8.7E-53 346.0 20.6 226 45-284 4-230 (266)
9 2o9g_A Aquaporin Z; integral m 100.0 4.6E-48 1.6E-52 339.1 18.9 222 52-282 4-232 (234)
10 2f2b_A Aquaporin AQPM; protein 100.0 1.2E-47 4.3E-52 339.0 19.1 226 51-281 3-245 (246)
11 2w2e_A AQY1, aquaporin, aquapo 100.0 6.6E-47 2.2E-51 338.8 21.9 221 50-282 42-266 (279)
12 1ldf_A Glycerol uptake facilit 100.0 1.2E-47 4E-52 345.1 16.8 226 51-283 6-258 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 1.1E-47 3.8E-52 341.3 13.1 225 51-282 8-244 (258)
14 2f2b_A Aquaporin AQPM; protein 99.8 1.4E-20 4.8E-25 165.9 8.2 136 13-156 101-244 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.8 2.1E-18 7.2E-23 153.2 10.8 137 14-158 88-225 (263)
16 2o9g_A Aquaporin Z; integral m 99.8 1.9E-18 6.5E-23 151.0 9.2 135 14-157 86-231 (234)
17 3iyz_A Aquaporin-4; water tran 99.7 4.3E-18 1.5E-22 154.7 10.3 138 14-159 134-272 (340)
18 2w2e_A AQY1, aquaporin, aquapo 99.7 3.2E-18 1.1E-22 153.0 9.2 134 14-157 132-265 (279)
19 3d9s_A Aquaporin-5, AQP-5; aqu 99.7 2.5E-18 8.6E-23 152.7 7.6 137 14-158 90-228 (266)
20 2zz9_A Aquaporin-4; water tran 99.7 4.6E-18 1.6E-22 153.1 8.8 138 13-158 94-232 (301)
21 3gd8_A Aquaporin-4; proton exc 99.7 3E-18 1E-22 148.7 7.0 135 14-156 86-221 (223)
22 3llq_A Aquaporin Z 2; aquapori 99.7 4.3E-18 1.5E-22 150.1 8.1 134 14-156 111-253 (256)
23 1j4n_A Aquaporin 1; membrane p 99.7 4.6E-18 1.6E-22 151.6 7.7 137 14-158 98-235 (271)
24 3cn5_A Aquaporin; membrane pro 99.7 1.9E-18 6.5E-23 155.9 4.1 143 14-159 144-290 (304)
25 1ldf_A Glycerol uptake facilit 99.7 3.2E-17 1.1E-21 147.0 5.6 139 14-158 88-257 (281)
26 3c02_A Aquaglyceroporin; membr 99.6 9E-17 3.1E-21 142.4 5.3 139 14-157 90-243 (258)
27 3kcu_A Probable formate transp 70.5 54 0.0018 28.6 12.1 103 93-199 72-183 (285)
28 3tds_E Formate/nitrite transpo 62.4 43 0.0015 28.9 9.2 178 93-284 68-260 (268)
29 4fc4_A Nitrite transporter NIR 55.4 61 0.0021 27.8 8.9 180 93-286 62-255 (261)
30 3kly_A Putative formate transp 54.5 1.1E+02 0.0036 26.5 13.0 103 93-199 71-182 (280)
31 3s2u_A UDP-N-acetylglucosamine 36.4 6.1 0.00021 35.4 -0.6 21 108-128 9-29 (365)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=6.8e-55 Score=394.02 Aligned_cols=256 Identities=77% Similarity=1.320 Sum_probs=207.3
Q ss_pred cccccCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccC
Q 023021 30 GKDYVEPPPAPLFEEEELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAG 109 (288)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~ 109 (288)
.|++++|++.+..+.++.++++++|++++||+|||+|+|.+++++++.....++....+++.+++++|+++++.++++++
T Consensus 38 ~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~ 117 (304)
T 3cn5_A 38 GKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAG 117 (304)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeec
Confidence 48888887777788888899999999999999999999999988776543333334567788999999999999999999
Q ss_pred ccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHH
Q 023021 110 ISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTF 189 (288)
Q Consensus 110 ~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~ 189 (288)
+||||+|||||++.++.|+++|.+.+.|+++|++|+++|+.+++.++ ++.++..+.+.+.+.++.+..++|+.|+++|+
T Consensus 118 iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~-~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf 196 (304)
T 3cn5_A 118 ISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTALGAEIIGTF 196 (304)
T ss_dssp TTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccCcccccCCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 44455444445555667888999999999999
Q ss_pred HHHHHHHhhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHH
Q 023021 190 VLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGA 269 (288)
Q Consensus 190 iLv~~vl~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Ga 269 (288)
+|+++++.++|+++....++.+.+.|+.||+++.++.++++++||++|||||||||+++++++..|+++|+||+||++|+
T Consensus 197 iLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa 276 (304)
T 3cn5_A 197 VLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGA 276 (304)
T ss_dssp HHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHH
Confidence 99999998888766543333345899999999999999999999999999999999999654568999999999999999
Q ss_pred HHHHHHHHHHhccCCCC
Q 023021 270 ALAALYHQVVIRAIPFK 286 (288)
Q Consensus 270 i~a~~~~~~~~~~~~~~ 286 (288)
++|+++|++++...+.+
T Consensus 277 ~laa~~y~~l~~~~~~~ 293 (304)
T 3cn5_A 277 AVAAAYHQYVLRAAAIK 293 (304)
T ss_dssp HHHHHHHHTTSCCCC--
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 99999999999877755
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-50 Score=364.83 Aligned_cols=246 Identities=38% Similarity=0.608 Sum_probs=202.8
Q ss_pred ccccccCCCCCCCcc-----cccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHH
Q 023021 29 DGKDYVEPPPAPLFE-----EEELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFAL 103 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~-----~~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~ 103 (288)
..|++.+|.+.+... .++....+++|++++||+|||+|+|.+++++++.. ..++....+++.+++++|+++++.
T Consensus 23 ~~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~-~~~~~~~~g~l~Iala~GlaV~~~ 101 (340)
T 3iyz_A 23 GRDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWG-GSENPLPVDMVLISLCFGLSIATM 101 (340)
T ss_pred CCCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCcchHHHHHHHHHHHHHh
Confidence 356676665554322 23334557899999999999999999999877542 222233456778899999999999
Q ss_pred HHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhH
Q 023021 104 VYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGA 183 (288)
Q Consensus 104 ~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 183 (288)
+++++++||||+|||||++.++.|+++|.+++.|+++|++|+++|+.+++.++ ++... ...+.+.+.++.+..++|+.
T Consensus 102 v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~-~~~~~-~~lg~~~~~~~~s~~~~f~~ 179 (340)
T 3iyz_A 102 VQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVT-PPSVV-GGLGVTTVHGNLTAGHGLLV 179 (340)
T ss_pred eeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc-chhhc-CceeeccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 33321 11233445667788899999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeeh
Q 023021 184 EIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWV 263 (288)
Q Consensus 184 E~i~T~iLv~~vl~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~v 263 (288)
|+++||+|+++++...++++... ....|+.||+++.+..+.+++.||++|||||||||+++.+ .|+++||||+
T Consensus 180 E~i~Tf~Lv~~Ila~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywv 252 (340)
T 3iyz_A 180 ELIITFQLVFTIFASCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWV 252 (340)
T ss_pred HHHHHHHHHHHHHHhhcCccCCc----ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhH
Confidence 99999999999999988766432 2467999999998888888899999999999999999864 7999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCC
Q 023021 264 GPFIGAALAALYHQVVIRAIP 284 (288)
Q Consensus 264 ap~~Gai~a~~~~~~~~~~~~ 284 (288)
||++|+++|+++|++++.+.+
T Consensus 253 gPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 253 GPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred HHHHHHHHHHHHHHHHhCCCh
Confidence 999999999999999986544
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=346.90 Aligned_cols=221 Identities=41% Similarity=0.691 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCc
Q 023021 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (288)
Q Consensus 51 ~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~ 130 (288)
+++|++++||+|||+|++.+++++.+. ..+++....++..+++++|++++..+++++++||+|+|||||++.++.|+++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~-~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 80 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCT-TTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCC
Confidence 468999999999999999999887654 2222333456788899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHHhhccccccCCCCCC
Q 023021 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 210 (288)
Q Consensus 131 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~~~~~~ 210 (288)
|++.+.|+++|++|+++|+.+++.++ ++.... ..+.+.+.++.+..++++.|+++|++|+++++...|+++...
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~-~~~~~~-~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~---- 154 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVT-PPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDV---- 154 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-cccccc-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCc----
Confidence 99999999999999999999999998 333211 223344566778889999999999999999999988776432
Q ss_pred CccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHhc
Q 023021 211 PILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIR 281 (288)
Q Consensus 211 ~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~~ 281 (288)
+...|+.||+.+......+++.||++|||||||+|+++.+ .|+++|+||++|++|+++|+++||+++.
T Consensus 155 ~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 155 TGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 2467999999988777777789999999999999999974 7999999999999999999999999875
No 4
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.1e-49 Score=350.18 Aligned_cols=223 Identities=30% Similarity=0.516 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCC
Q 023021 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKL 129 (288)
Q Consensus 50 ~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~ 129 (288)
.+++|++++||+|||+|++.+++++...... +....+++.+++++|+++++.+++++++||+|+|||||++.++.|++
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~--~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 104 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAF--PELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRF 104 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCC
Confidence 3568999999999999999999876433222 12345678889999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHhHHHHHHHHHHHHHhcC-ccccccCC---Ccc-cccCCCCCcchhhHHHHHHHHHHHHHHhhcccccc
Q 023021 130 SLTRALFYMVMQCLGAICGAGVVKGFMGA-GQYGRLGG---GAN-AVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (288)
Q Consensus 130 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~-~~~~~~~~---~~~-~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~ 204 (288)
+|.+.+.|+++|++|+++|+.+++.++.. ..++..+. +.. +.....+..++|+.|+++|++|+++++..+|+++.
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~~ 184 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVP 184 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999832 22322111 111 11224677889999999999999999998876542
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHhc
Q 023021 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIR 281 (288)
Q Consensus 205 ~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~~ 281 (288)
+.+.|+.||+.+..+.+..++.||++|||||||||+++.+ +..|+++||||+||++|+++|+++|+++.+
T Consensus 185 ------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~ 254 (256)
T 3llq_A 185 ------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGAAGAVIWKLFGE 254 (256)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHHHHHHHHHHHHhcc
Confidence 2478999999999999999999999999999999999873 345779999999999999999999999863
No 5
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.3e-48 Score=349.17 Aligned_cols=230 Identities=43% Similarity=0.719 Sum_probs=193.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccC----CCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHH
Q 023021 45 EELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS----NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVT 120 (288)
Q Consensus 45 ~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavT 120 (288)
+|.++.+++|++++||+|||+|+|.++++..+.... +.+....+.+.+++++|+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 355667889999999999999999999877654321 1112223567889999999999999999999999999999
Q ss_pred HHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHHhhcc
Q 023021 121 FGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (288)
Q Consensus 121 l~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~ 200 (288)
++.++.|+++|.+.+.|+++|++|+++|+.+++.++.+.. . ...+.+...++.+..++++.|+++|++|+++++...|
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d 160 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLP-D-NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCT-T-CCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCc-c-cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999983221 1 1123344566778889999999999999999999887
Q ss_pred ccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHh
Q 023021 201 AKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 280 (288)
Q Consensus 201 ~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~ 280 (288)
+++... +.+.|+.||+.+....+.+++.||++|||||||||+++.+ .|+++|+||+||++|+++|+++|++++
T Consensus 161 ~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~~ 233 (271)
T 1j4n_A 161 RRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFIL 233 (271)
T ss_dssp SSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHHh
Confidence 765421 3478999999999888887889999999999999999863 799999999999999999999999998
Q ss_pred ccC
Q 023021 281 RAI 283 (288)
Q Consensus 281 ~~~ 283 (288)
..+
T Consensus 234 ~~~ 236 (271)
T 1j4n_A 234 APR 236 (271)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 6
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=7.2e-49 Score=353.89 Aligned_cols=229 Identities=40% Similarity=0.651 Sum_probs=192.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHH
Q 023021 46 ELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 125 (288)
Q Consensus 46 ~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~ 125 (288)
+..+.+++|++++||+|||+|+|++++++++...+ .+....+++.+++++|+++++.+++++++||||+|||||++.++
T Consensus 6 ~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~-~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 84 (301)
T 2zz9_A 6 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 84 (301)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHH
Confidence 34456889999999999999999999876654322 22234567788999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHHhhccccccC
Q 023021 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (288)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~ 205 (288)
.|+++|.+.+.|+++|++|+++|+.+++.++++ ... ...+.+.+.++.+..++|+.|+++||+|+++++...++++..
T Consensus 85 ~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~-~~~-~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 85 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPP-SVV-GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp TSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCS-CGG-GTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccc-CceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999999999843 221 122344455677888999999999999999999988776542
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHhccCC
Q 023021 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIP 284 (288)
Q Consensus 206 ~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~~~~~ 284 (288)
. +.+.|+.||+.+....+.+++.||++|||||||||+++.+ .|.++|+||+||++|+++|+++|++++.+++
T Consensus 163 ~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 163 V----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp C----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred c----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 1 3478999999998888888889999999999999999974 7999999999999999999999999986443
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=5e-48 Score=344.01 Aligned_cols=225 Identities=35% Similarity=0.577 Sum_probs=192.4
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHH
Q 023021 46 ELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 125 (288)
Q Consensus 46 ~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~ 125 (288)
|.++.+++|++++||+|||+|+++++++.... +....+.+.+++++|+++++.++.++++||+|+|||||+++++
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-----~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~ 77 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLV 77 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-----CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHH
Confidence 45567889999999999999999998876422 1223356678999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHHhhccccccC
Q 023021 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (288)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~ 205 (288)
.|+++|.+++.|+++|++|+++|+.+++.++++ .... ..+.+.+.++.+..++|+.|+++|++|+++++...|+++..
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~-~~~~-~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 155 (263)
T 2b6o_A 78 GSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNG 155 (263)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCT-TTCS-SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc-cccc-ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999999999999999999999943 3221 12334456777888999999999999999999998766532
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHhccCC
Q 023021 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIP 284 (288)
Q Consensus 206 ~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~~~~~ 284 (288)
. ..+.|+.||+.+.+..+.++++||++|||||||||+++.+ .|+++|+||+||++|+++|+++|++++.+.+
T Consensus 156 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 156 R----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp S----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred C----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 2 3478999999999999999999999999999999999874 8999999999999999999999999986543
No 8
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-48 Score=346.00 Aligned_cols=226 Identities=38% Similarity=0.614 Sum_probs=193.3
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHH
Q 023021 45 EELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLF 124 (288)
Q Consensus 45 ~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~ 124 (288)
+|.++.+++|++++||+|||+|+|.+++++... + ....+.+.+++++|+++++.+++++++||||+|||||++.+
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~--~---~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~ 78 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW--P---SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALL 78 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC--S---SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC--C---CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHH
Confidence 355667889999999999999999999876421 1 12246778899999999999999999999999999999999
Q ss_pred HhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHHhhcccccc
Q 023021 125 LARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (288)
Q Consensus 125 ~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~ 204 (288)
+.|+++|.+.+.|+++|++|+++|+.+++.++ ++... ...+.+.+.++.+..++|+.|+++|++|+++++..+|+++.
T Consensus 79 ~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~-~~~~~-~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~ 156 (266)
T 3d9s_A 79 VGNQISLLRAFFYVAAQLVGAIAGAGILYGVA-PLNAR-GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRT 156 (266)
T ss_dssp HTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHH-TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccc-CceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999 33221 12223344566778899999999999999999999876654
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCc-ceeeehhhHHHHHHHHHHHHHHhccC
Q 023021 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDD-HWIFWVGPFIGAALAALYHQVVIRAI 283 (288)
Q Consensus 205 ~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~-~wvy~vap~~Gai~a~~~~~~~~~~~ 283 (288)
.. +.+.|+.||+.+....+.++++||++|||||||||+++.+ .|++ +|+||++|++|+++|+++|++++.+.
T Consensus 157 ~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 157 SP----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp SC----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred Cc----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 21 2478999999999999999999999999999999999874 7998 99999999999999999999998654
Q ss_pred C
Q 023021 284 P 284 (288)
Q Consensus 284 ~ 284 (288)
+
T Consensus 230 ~ 230 (266)
T 3d9s_A 230 S 230 (266)
T ss_dssp S
T ss_pred c
Confidence 4
No 9
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=4.6e-48 Score=339.12 Aligned_cols=222 Identities=28% Similarity=0.497 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCcc
Q 023021 52 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSL 131 (288)
Q Consensus 52 ~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~ 131 (288)
++|++++||+|||+|+|.+++++..... .++...+.+.+++++|+++++.+++++++||+|+|||||++.++.|+++|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~--~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAG--FPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTT--CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccC--CCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCH
Confidence 5789999999999999999887532221 11223467788999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHhcCc-ccccc-----CCCccc-ccCCCCCcchhhHHHHHHHHHHHHHHhhcccccc
Q 023021 132 TRALFYMVMQCLGAICGAGVVKGFMGAG-QYGRL-----GGGANA-VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (288)
Q Consensus 132 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-~~~~~-----~~~~~~-~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~ 204 (288)
++.+.|+++|++|+++|+.+++.++++. +++.. ..+... ...+.+..++|+.|+++|++|+++++..+|+++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~ 161 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAP 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999998432 23221 111111 1224677889999999999999999998875431
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHhcc
Q 023021 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRA 282 (288)
Q Consensus 205 ~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~~~ 282 (288)
+.+.|+.||+.+..+.+..++.||++|||||||||++++ ++..|+++|+||++|++|+++|+++|++++++
T Consensus 162 ------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~-g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 162 ------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQ-GGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHH-CSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHh-CCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 347899999999999999999999999999999999997 34457799999999999999999999999864
No 10
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.2e-47 Score=339.03 Aligned_cols=226 Identities=31% Similarity=0.441 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhcc-cCCC--------CC-----CCcchhHHHHHHHHHHHHHHHhccCccccccc
Q 023021 51 SFYRAGIAEFIATFLFLYISVLTVMGVV-KSNT--------KC-----STVGIQGIAWAFGGMIFALVYCTAGISGGHIN 116 (288)
Q Consensus 51 ~~~r~~~~EfigTf~lv~~~~~~~~~~~-~~~~--------~~-----~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~N 116 (288)
+++|++++||+|||+|+|.+++++.... .+++ .. ...+++.+++++|+++++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 3689999999999999999998766543 1110 01 11234558999999999999999999999999
Q ss_pred hHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHH
Q 023021 117 PAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVF 196 (288)
Q Consensus 117 PavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl 196 (288)
||||++.++.|+++|++.+.|+++|++|+++|+.+++.+++++.........+.+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999995422211222233344567888999999999999999999
Q ss_pred hhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHH--Hh-CCCCCCCcceeeehhhHHHHHHHH
Q 023021 197 SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI--IY-NKDHGWDDHWIFWVGPFIGAALAA 273 (288)
Q Consensus 197 ~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l--~~-~~~~~w~~~wvy~vap~~Gai~a~ 273 (288)
...++++.. +.+.|+.+|+.+....++.+++||+++||||||+|++ .. +++..|++.|+||++|++|+++|+
T Consensus 163 ~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa 237 (246)
T 2f2b_A 163 GIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAA 237 (246)
T ss_dssp HHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHH
T ss_pred EEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHH
Confidence 876554432 3478999999999999999999999999999999999 33 456789999999999999999999
Q ss_pred HHHHHHhc
Q 023021 274 LYHQVVIR 281 (288)
Q Consensus 274 ~~~~~~~~ 281 (288)
++|+++++
T Consensus 238 ~~y~~l~~ 245 (246)
T 2f2b_A 238 LTYQYLTS 245 (246)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999875
No 11
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=6.6e-47 Score=338.84 Aligned_cols=221 Identities=33% Similarity=0.519 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhh--hcccC--CCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHH
Q 023021 50 WSFYRAGIAEFIATFLFLYISVLTVM--GVVKS--NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 125 (288)
Q Consensus 50 ~~~~r~~~~EfigTf~lv~~~~~~~~--~~~~~--~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~ 125 (288)
++.+|++++||+|||+|+|.++++.. +...+ +......+++.+++++|+++++.+++++++||||+|||||++.++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 36789999999999999999887532 11111 112223456778999999999999999999999999999999999
Q ss_pred hcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcccccCCCCCcchhhHHHHHHHHHHHHHHhhccccccC
Q 023021 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (288)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~ 205 (288)
.|+++|.+.+.|+++|++|+++|+.+++.++ ++... ..+.+.++.+..++|+.|+++|++|+++++...++++..
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~-~~~~~----~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~ 196 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMT-PGEIA----FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA 196 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CSSCC----CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc-cccce----eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999999999999999998 33321 123344567778999999999999999999987655431
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhCCCCCCCcceeeehhhHHHHHHHHHHHHHHhcc
Q 023021 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRA 282 (288)
Q Consensus 206 ~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~~~~~w~~~wvy~vap~~Gai~a~~~~~~~~~~ 282 (288)
+.+.|+.||+.+.++.+++++.||++|||||||||+++.+ ..|+++|+||+||++|+++|+++|++++..
T Consensus 197 -----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiGa~la~~ly~~l~~~ 266 (279)
T 2w2e_A 197 -----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266 (279)
T ss_dssp -----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3578999999999999999999999999999999999974 245789999999999999999999999754
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.2e-47 Score=345.08 Aligned_cols=226 Identities=27% Similarity=0.387 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCc
Q 023021 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (288)
Q Consensus 51 ~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~ 130 (288)
+++|++++||+|||+|+|.+++++.....++. ..+...+++++|+++++.+++++++||+|+|||||++.++.|+++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~---~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 82 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFD 82 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCC
Confidence 56899999999999999999987665444322 223445899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhcCcccccc-----------------CCCcccccCCCCCcchhhHHHHHHHHHHH
Q 023021 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRL-----------------GGGANAVAHGYTKGDGLGAEIIGTFVLVY 193 (288)
Q Consensus 131 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~s~~~~~~~E~i~T~iLv~ 193 (288)
|.+.+.|+++|++|+++|+.+++.++++ .++.. ...++.+.++.+..++|+.|+++|++|++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~ 161 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYN-LFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMG 161 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999843 22110 01122244556788999999999999999
Q ss_pred HHHhhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhC----CCC------CCCcceeeeh
Q 023021 194 TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN----KDH------GWDDHWIFWV 263 (288)
Q Consensus 194 ~vl~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~----~~~------~w~~~wvy~v 263 (288)
+++...|+++... .+.+.|+.||+.+.++.++.++.||++|||||||||++++. ++. +|.++||||+
T Consensus 162 ~il~~~d~~~~~~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~v 238 (281)
T 1ldf_A 162 LILALTDDGNGVP---RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLF 238 (281)
T ss_dssp HHHHHHCTTSSSC---CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHH
T ss_pred HHHHHhccCCCCc---ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhH
Confidence 9999988765421 13588999999999999999999999999999999999851 112 2338999999
Q ss_pred hhHHHHHHHHHHHHHHhccC
Q 023021 264 GPFIGAALAALYHQVVIRAI 283 (288)
Q Consensus 264 ap~~Gai~a~~~~~~~~~~~ 283 (288)
+|++|+++|+++|+++++.+
T Consensus 239 gPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 239 GPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999998654
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-47 Score=341.27 Aligned_cols=225 Identities=22% Similarity=0.336 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCc
Q 023021 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (288)
Q Consensus 51 ~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~ 130 (288)
+++|++++||+|||+|+|.+++++.+...++ ...+.+.+++++|+++++.+++++++||+|+|||||++.++.|+++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 84 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFD 84 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCC---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCc
Confidence 5689999999999999999998766543222 1346778899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCC----CcccccCCCCCcchhhHHHHHHHHHHHHHHhhccccccCC
Q 023021 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGG----GANAVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 206 (288)
Q Consensus 131 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~~ 206 (288)
|++.+.|+++|++|+++|+.+++.+++ +.++.... +......+.+..++++.|+++|++|+++++..+|++|...
T Consensus 85 ~~~~~~Yi~AQ~lGa~~ga~l~~~~~~-~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~ 163 (258)
T 3c02_A 85 LKKIPVYFFAQLLGAFVGTSTVYGLYH-GFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGK 163 (258)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHTH-HHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc-hhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCc
Confidence 999999999999999999999999983 33322111 1111222334456899999999999999999988765421
Q ss_pred CCCCCccc-hHHHHHHHHHHHHHhcCCCCCccchHhhHHHHHHhC---CCCCC----CcceeeehhhHHHHHHHHHHHHH
Q 023021 207 DSHVPILA-PLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN---KDHGW----DDHWIFWVGPFIGAALAALYHQV 278 (288)
Q Consensus 207 ~~~~~~l~-~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~~l~~~---~~~~w----~~~wvy~vap~~Gai~a~~~~~~ 278 (288)
. +.+. |+.||+.+..+.++.++.||++|||||||||+++++ ++..| +++|+||++|++|+++|+++|++
T Consensus 164 ~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~ 240 (258)
T 3c02_A 164 F---HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDK 240 (258)
T ss_dssp C---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred c---cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHH
Confidence 1 3477 999999999999999999999999999999999862 23345 56999999999999999999999
Q ss_pred Hhcc
Q 023021 279 VIRA 282 (288)
Q Consensus 279 ~~~~ 282 (288)
++..
T Consensus 241 ~~~~ 244 (258)
T 3c02_A 241 VICP 244 (258)
T ss_dssp THHH
T ss_pred Hhcc
Confidence 9864
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.82 E-value=1.4e-20 Score=165.88 Aligned_cols=136 Identities=21% Similarity=0.201 Sum_probs=103.5
Q ss_pred ccchhhhhhhhhhcccccccccCCCC--CCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcch
Q 023021 13 NKFTERQPIGTAAQSQDGKDYVEPPP--APLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGI 89 (288)
Q Consensus 13 ~~y~~~q~~G~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~ 89 (288)
=.|+++|++|+++++...+...+++. ........+ ...+..|.++.|+++||+|++.++++... .+. . .+
T Consensus 101 ~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~-~~~---~--~~- 173 (246)
T 2f2b_A 101 VPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVD-ERA---P--KG- 173 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTS-TTS---C--TT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecC-CCC---C--Cc-
Confidence 35999999999999987655544311 011111111 23457899999999999999998764321 111 1 11
Q ss_pred hHHHHHHHHHHHHHHHhccCccccccchHHHHHHHH-----hcCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023021 90 QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL-----ARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (288)
Q Consensus 90 ~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~-----~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 156 (288)
..++++|+.+...++..+++||+|+|||||+++++ -++..|.+.|+||++|++|+++|+.+++.+.
T Consensus 174 -~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~ 244 (246)
T 2f2b_A 174 -FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLT 244 (246)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHc
Confidence 24899999999999999999999999999999999 3466899999999999999999999998876
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.76 E-value=2.1e-18 Score=153.17 Aligned_cols=137 Identities=20% Similarity=0.176 Sum_probs=104.8
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
.|+++|++|+++++...+...+++.....+...+ ...+..+.++.|+++||+|+++++.+. +.+++. ..+ ..
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~--d~~~~~---~~~--~~ 160 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATY--DERRNG---RLG--SV 160 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS--CTTSCS---SCC--CH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHh--cccCCC---Ccc--cH
Confidence 5999999999999987655554332222222111 123568899999999999999887642 222111 111 13
Q ss_pred HHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 023021 93 AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 158 (288)
++.+|+.+.+.++..++.||+.+||||++++++..+ +|.++|+||++|++|+++|+.+++.++.+
T Consensus 161 pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 225 (263)
T 2b6o_A 161 ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 (263)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTTCTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-CccceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 788999999999999999999999999999999876 79999999999999999999999988744
No 16
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.75 E-value=1.9e-18 Score=151.04 Aligned_cols=135 Identities=15% Similarity=0.157 Sum_probs=102.2
Q ss_pred cchhhhhhhhhhcccccccccCCCC----------CCCcccccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCC
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPP----------APLFEEEELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~ 83 (288)
.|+++|++|+++++...+...++.+ ............+..+.++.|+++||+|+++++... +++. .
T Consensus 86 ~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~--d~~~--~ 161 (234)
T 2o9g_A 86 GYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT--DKFA--P 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT--STTS--C
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc--CCCC--c
Confidence 5999999999999886544332211 001111112234578899999999999999887643 2111 1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhc-CCccchhHHHHHHHhHHHHHHHHHHHHHhc
Q 023021 84 CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR-KLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (288)
Q Consensus 84 ~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g-~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 157 (288)
.+ ..++.+|+.+....+..++.||+.+||||++++++.. +.+|.++|+||++|++|+++|+.+++.++.
T Consensus 162 ---~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~ 231 (234)
T 2o9g_A 162 ---AG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 231 (234)
T ss_dssp ---TT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ---cc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcC
Confidence 11 2388999999999999999999999999999999974 446779999999999999999999998873
No 17
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.74 E-value=4.3e-18 Score=154.69 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=103.5
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
.|+++|++|+++|+..++...++......+.... ...+..+.++.|+++||+|+++++.+. +.++... .+ ..
T Consensus 134 ~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~--d~~~~~~---~~--~~ 206 (340)
T 3iyz_A 134 FYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC--DDKRTDV---TG--SV 206 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhh--cCccCCc---cc--ch
Confidence 5999999999999987665544322111111111 234568899999999999999887643 2111111 11 13
Q ss_pred HHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCc
Q 023021 93 AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 159 (288)
++++|+++.+.+...++.||+.+||||++++++... .|.++|+||++|++|+++|+++++.++.++
T Consensus 207 pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~~WVywvgPiiGailaallY~~l~~p~ 272 (340)
T 3iyz_A 207 ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCPD 272 (340)
T ss_pred hhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCcEeehhHHHHHHHHHHHHHHHHHhCCC
Confidence 788888888777877899999999999999999865 699999999999999999999999988543
No 18
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.74 E-value=3.2e-18 Score=153.02 Aligned_cols=134 Identities=15% Similarity=0.069 Sum_probs=103.0
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHHH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (288)
.|+++|++|+++|+..++...+++..-...+. ...+..+.++.|+++||+|+++++..... ++ .. . ...+
T Consensus 132 ~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~--~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~--~~--~~--~--~~~p 201 (279)
T 2w2e_A 132 LMAFTQIVAGMAAAGAASAMTPGEIAFANALG--GGASRTRGLFLEAFGTAILCLTVLMLAVE--KH--RA--T--WFAP 201 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHTTS--CS--TT--G--GGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccccceeeccCC--ccccHHHHHHHHHHHHHHHHHHHHHHccC--CC--CC--c--CcHH
Confidence 59999999999999876655543321111111 12356789999999999999988764321 11 11 1 1238
Q ss_pred HHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc
Q 023021 94 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (288)
Q Consensus 94 ~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 157 (288)
+.+|+++++..+..++.||+.+||||++++++....-+.++|+||++|++|+++|+++++.+..
T Consensus 202 l~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 202 FVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999999987644568999999999999999999998873
No 19
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.73 E-value=2.5e-18 Score=152.73 Aligned_cols=137 Identities=17% Similarity=0.122 Sum_probs=103.1
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
.|+++|++|+++|+...+...+++.....+...+ ...+..+.++.|+++||+|+++++.+. +.+++.. .+ ..
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~--d~~~~~~---~~--~~ 162 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAST--DSRRTSP---VG--SP 162 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH--CTTCCSC---CC--CH
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHh--cccCCCc---cc--hH
Confidence 5999999999999987655443211111111111 123567899999999999999987653 2222111 11 13
Q ss_pred HHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccch-hHHHHHHHhHHHHHHHHHHHHHhcC
Q 023021 93 AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTR-ALFYMVMQCLGAICGAGVVKGFMGA 158 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~-~~~yi~aQ~~Ga~~g~~~~~~~~~~ 158 (288)
++++|+.+.+.++..++.||+.+||||++++++..+ +|.+ +|+||++|++|+++|+.+++.+..+
T Consensus 163 pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 163 ALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-CcccCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 788999998888988999999999999999999866 7988 9999999999999999999988744
No 20
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.73 E-value=4.6e-18 Score=153.09 Aligned_cols=138 Identities=16% Similarity=0.150 Sum_probs=103.1
Q ss_pred ccchhhhhhhhhhcccccccccCCCCCCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhH
Q 023021 13 NKFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (288)
Q Consensus 13 ~~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (288)
=.|+++|++|+++|+..++...++......+.... ...+..+.++.|+++||+|+++++.+. +.+++.. .+ .
T Consensus 94 ~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~--d~~~~~~---~~--~ 166 (301)
T 2zz9_A 94 VFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC--DDKRTDV---TG--S 166 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHS--CSSSSCC---SS--C
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhc--CCCCCCc---cc--h
Confidence 35999999999999987666554322111111111 233568899999999999999887642 2211111 11 1
Q ss_pred HHHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 023021 92 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (288)
Q Consensus 92 ~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 158 (288)
.++++|+.+.+.+...++.||+.+||||++++++... .|.++|+||++|++|+++|+++++.++.+
T Consensus 167 ~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 167 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred HhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 3788999888777877799999999999999999875 79999999999999999999999988743
No 21
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.73 E-value=3e-18 Score=148.72 Aligned_cols=135 Identities=18% Similarity=0.175 Sum_probs=99.1
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
.|+++|++|+++++...+...+++.....+.... ...+..+.++.|+++||+|+++++... +.+++.. .+. .
T Consensus 86 ~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~--~~~~~~~---~~~--~ 158 (223)
T 3gd8_A 86 FYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASC--DSKRTDV---TGS--I 158 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT--CTTCSCC---CSC--H
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHh--ccccCCc---cCC--c
Confidence 5999999999999886554433211101111111 123567899999999999999887642 2221111 111 3
Q ss_pred HHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023021 93 AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 156 (288)
++++|+.+.+.+...++.||+.+||||++++++..+ +|.++|+||++|++|+++|+.+++.++
T Consensus 159 pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 159 ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 788888887777777789999999999999999876 799999999999999999999998876
No 22
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=4.3e-18 Score=150.11 Aligned_cols=134 Identities=18% Similarity=0.171 Sum_probs=100.3
Q ss_pred cchhhhhhhhhhcccccccccCC-CCC-------CCcccccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCC
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEP-PPA-------PLFEEEELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCS 85 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~ 85 (288)
.|+++|++|+++|+..++...+. +.. ...........+..+.++.|+++||+|+++++.+. +.+. . .
T Consensus 111 ~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~--d~~~--~-~ 185 (256)
T 3llq_A 111 PYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGST--HGRV--P-A 185 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHH--STTS--C-T
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhc--CCCC--C-c
Confidence 59999999999999865443211 000 00111112234678899999999999999877542 2211 1 1
Q ss_pred CcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHh-cCCccchhHHHHHHHhHHHHHHHHHHHHHh
Q 023021 86 TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLA-RKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (288)
Q Consensus 86 ~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~-g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 156 (288)
+ ..++++|+++.++.+..++.||+.+||||++++.+. ++..|.++|+||++|++|+++|+.+++.+.
T Consensus 186 --~--~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 186 --G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp --T--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred --c--chhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 1 238899999999999999999999999999999986 445677999999999999999999998875
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.72 E-value=4.6e-18 Score=151.61 Aligned_cols=137 Identities=15% Similarity=0.105 Sum_probs=101.1
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCCcccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhHH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPLFEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
.|+++|++|+++|+..++...++.+....+.... ...+..+.++.|+++||+|+++++... +.++... .+ ..
T Consensus 98 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~--d~~~~~~---~~--~~ 170 (271)
T 1j4n_A 98 MYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT--DRRRRDL---GG--SG 170 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHT--CSSCCCC---CS--CH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhc--cccCCCc---cc--cH
Confidence 5999999999999987655543322222221111 122346678999999999999877532 2221111 11 13
Q ss_pred HHHHHHHHHHHHHhccCccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 023021 93 AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 158 (288)
++.+|+.+.+.+...++.||+.+||||++++++..+ +|.++|+||++|++|+++|+.+++.++.+
T Consensus 171 pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 171 PLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDHWIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCcceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 788999988777777789999999999999999875 79999999999999999999999988743
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.72 E-value=1.9e-18 Score=155.93 Aligned_cols=143 Identities=22% Similarity=0.231 Sum_probs=103.0
Q ss_pred cchhhhhhhhhhcccccccccCCCCCCC-cccccc-cchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCcchhH
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPPPAPL-FEEEEL-TSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (288)
.|+++|++|+++|+..++...++..... .+...+ ...+..+.++.|+++||+|+++++.. .+.++..........
T Consensus 144 ~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~--~d~~~~~~~~~~~~l- 220 (304)
T 3cn5_A 144 VYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSA--TDPKRSARDSHVPIL- 220 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT--EEEEEESTTSCCEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhe--ecCccCCCCcccccc-
Confidence 5999999999999886554432210000 000111 12456789999999999999988743 222221111111111
Q ss_pred HHHHHHHHHHHHHHhccCccccccchHHHHHHHHh--cCCccchhHHHHHHHhHHHHHHHHHHHHHhcCc
Q 023021 92 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLA--RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (288)
Q Consensus 92 ~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~--g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 159 (288)
.++.+|+++++..+..++.||+.+||||++++++. +...|.++|+||++|++|+++|+++++.++.++
T Consensus 221 apl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 221 APLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred hHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 28899999999999999999999999999999997 234799999999999999999999999887443
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.67 E-value=3.2e-17 Score=147.01 Aligned_cols=139 Identities=18% Similarity=0.154 Sum_probs=99.7
Q ss_pred cchhhhhhhhhhcccccccccCCC--------C---C--------CCcccccccchHHHHHHHHHHHHHHHHHHHHhHhh
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEPP--------P---A--------PLFEEEELTSWSFYRAGIAEFIATFLFLYISVLTV 74 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~~--------~---~--------~~~~~~~~~~~~~~r~~~~EfigTf~lv~~~~~~~ 74 (288)
.|+++|++|+++|+..++...++. . . ....+......+..+.++.|+++||+|+++++...
T Consensus 88 ~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~ 167 (281)
T 1ldf_A 88 PFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALT 167 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 599999999999988643332110 0 0 00001011123578899999999999999887643
Q ss_pred hhcccCCCCCCCcchhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhc------CCccc------hhHHHHHHHh
Q 023021 75 MGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR------KLSLT------RALFYMVMQC 142 (288)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g------~~~~~------~~~~yi~aQ~ 142 (288)
+.++... .+ ...++.+|+++....+..++.||+.+||||++++++.. +..|. ++|+||++|+
T Consensus 168 --d~~~~~~---~~-~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi 241 (281)
T 1ldf_A 168 --DDGNGVP---RG-PLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPI 241 (281)
T ss_dssp --CTTSSSC---CG-GGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHH
T ss_pred --ccCCCCc---cc-chHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHH
Confidence 2221110 01 12389999999999999999999999999999999863 22333 7999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q 023021 143 LGAICGAGVVKGFMGA 158 (288)
Q Consensus 143 ~Ga~~g~~~~~~~~~~ 158 (288)
+|+++|+.+++.+..+
T Consensus 242 ~Ga~la~~~y~~l~~~ 257 (281)
T 1ldf_A 242 VGAIVGAFAYRKLIGR 257 (281)
T ss_dssp HHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999999998743
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.64 E-value=9e-17 Score=142.37 Aligned_cols=139 Identities=17% Similarity=0.128 Sum_probs=98.7
Q ss_pred cchhhhhhhhhhcccccccccCC-----CCCCCccc-ccccchHHHHHHHHHHHHHHHHHHHHhHhhhhcccCCCCCCCc
Q 023021 14 KFTERQPIGTAAQSQDGKDYVEP-----PPAPLFEE-EELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV 87 (288)
Q Consensus 14 ~y~~~q~~G~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~r~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~ 87 (288)
.|+++|++|+++++...+...++ ......+. .........+.++.|+++||+|+++++... +.++.. ..
T Consensus 90 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~--d~~~~~---~~ 164 (258)
T 3c02_A 90 VYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVV--DENICG---KF 164 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH--CHHHHC---SC
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHh--CcccCC---cc
Confidence 59999999999998864333221 00000000 001122345689999999999999987643 222110 11
Q ss_pred chhHHHHHHHHHHHHHHHhccCccccccchHHHHHHHHhc-----CCcc----chhHHHHHHHhHHHHHHHHHHHHHhc
Q 023021 88 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR-----KLSL----TRALFYMVMQCLGAICGAGVVKGFMG 157 (288)
Q Consensus 88 ~~~~~~~a~g~~v~~~~~~~~~~sGah~NPavTl~~~~~g-----~~~~----~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 157 (288)
....+++.+|+++....+..++.||+.+||||++++++.. +.+| .++|+||++|++|+++|+.+++.+..
T Consensus 165 ~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~ 243 (258)
T 3c02_A 165 HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVIC 243 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhc
Confidence 1222388999999999999999999999999999999974 2345 45899999999999999999998873
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=70.54 E-value=54 Score=28.55 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhccCc-cccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc-CccccccCCC--c
Q 023021 93 AWAFGGMIFALVYCTAGI-SGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG-AGQYGRLGGG--A 168 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~-sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~-~~~~~~~~~~--~ 168 (288)
++.+.+.+.++++.-+.. || |--.+ -..+.+|.+|.+..--|.-=.+|=++|+.++-.+.. .......++. .
T Consensus 72 g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T 3kcu_A 72 GICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_dssp HHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHH
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHH
Confidence 445555555555554443 44 32223 234467888876654444444444444444333320 0111110000 0
Q ss_pred c--cc---cCCCCCcchhhHHHHHHHHHHHHHHhhc
Q 023021 169 N--AV---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (288)
Q Consensus 169 ~--~~---~~~~s~~~~~~~E~i~T~iLv~~vl~~~ 199 (288)
. .. -.+.+..+.|+-=.+|-++..+.++...
T Consensus 148 ~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 183 (285)
T 3kcu_A 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 1123445666666777777777666654
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=62.40 E-value=43 Score=28.92 Aligned_cols=178 Identities=12% Similarity=0.081 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHhccCc-cccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCc--c
Q 023021 93 AWAFGGMIFALVYCTAGI-SGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGA--N 169 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~-sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~--~ 169 (288)
++.+.+.+.++++.-+.. || |-.......+.++.+|.+..--|.--.+|=++|+.++-.++...... .++.. .
T Consensus 68 g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~-~~~~~~~~ 143 (268)
T 3tds_E 68 GLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLV-DKGPVAEF 143 (268)
T ss_dssp HHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-SSSHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC-CCcHHHHH
Confidence 444444444455443332 22 43323345567888988887666666666666666555444111100 00000 0
Q ss_pred --ccc---CCCCCcchhhHHHHHHHHHHHHHHhhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHH
Q 023021 170 --AVA---HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 244 (288)
Q Consensus 170 --~~~---~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~ 244 (288)
... .+.+..+.|+-=.+|-++..+.++.....+... -+-+.+-+-++..+..+.-. ...|= --+.
T Consensus 144 ~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~~~k~~~-------gKi~~i~~pi~~Fv~~GfEH--~VANm-~~~~ 213 (268)
T 3tds_E 144 FANTAASKASMPFTALFFRGILCNILVCVSVLCSFRTNSDT-------AKIIMIFLCLFAIITSGFEH--SVANM-TIYS 213 (268)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHSCSCHH-------HHHHHHHHHHHHHHHHTCCC--HHHHH-HHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcCchh-------hHHHHHHHHHHHHHHccchH--HHHHH-HHHH
Confidence 000 123345566666666677666666543222110 11222223333333322222 22332 1222
Q ss_pred HHHHhCC--CCCCCcce---ee-ehhhHHHHH-HHHHHHHHHhccCC
Q 023021 245 AAIIYNK--DHGWDDHW---IF-WVGPFIGAA-LAALYHQVVIRAIP 284 (288)
Q Consensus 245 ~~l~~~~--~~~w~~~w---vy-~vap~~Gai-~a~~~~~~~~~~~~ 284 (288)
..++.+. +..|.+.+ ++ .+|.++|+. +-++.|.++++.+.
T Consensus 214 ~~~~~~~~~~~t~~~~~~nlipvtlGNiiGG~~fvgl~y~~~~~~~~ 260 (268)
T 3tds_E 214 VSLFSPTISTVTIGGAIYNLVAVTLGNIVGGALFMGLGTYILGKEKL 260 (268)
T ss_dssp HHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHCCC-
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3333321 33444322 22 268888874 56677777776543
No 29
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=55.36 E-value=61 Score=27.82 Aligned_cols=180 Identities=11% Similarity=0.042 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHhccCc-cccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhcCccccccCCCcc--
Q 023021 93 AWAFGGMIFALVYCTAGI-SGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLGGGAN-- 169 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~~-sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~-- 169 (288)
++.+...+.++++.-+.. || |-.......+.++.+|.+..--|.-=.+|=++|+.++-.++........+....
T Consensus 62 g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~~ 138 (261)
T 4fc4_A 62 GATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (261)
T ss_dssp HHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSHH
T ss_pred HHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHHH
Confidence 444444444445443322 22 433333445568889888877776656666666555544431111100000000
Q ss_pred -ccc---CCCCCcchhhHHHHHHHHHHHHHHhhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchHhhHHH
Q 023021 170 -AVA---HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 245 (288)
Q Consensus 170 -~~~---~~~s~~~~~~~E~i~T~iLv~~vl~~~~~~~~~~~~~~~~l~~~~igl~v~~~~~~~~~~sG~~lNPAr~~~~ 245 (288)
... ...+..+.|+-=.+|-++..+.++.....+.. -+-+.+-+-++.-+..+ ..=...|= --+..
T Consensus 139 ~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~~~~~~--------gKi~~i~~pi~~Fv~~G--fEH~VANm-~~~~~ 207 (261)
T 4fc4_A 139 HSVALAKTTAPATVLFFKGALCNWLVCLAIWMAIRTEGT--------AKFLAIWWCLLAFIASG--YEHSVANM-TLFAL 207 (261)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCHH--------HHHHHHHHHHHHHHHHT--CCCHHHHH-HHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhccch--------hhhhHHHHHHHHHHHcc--chHHHHhH-HHHHH
Confidence 011 01233455666666666666666554322111 11222222233222222 22223332 12333
Q ss_pred HHHhCC--CCCCCcce---ee-ehhhHHHHH-HHHHHHHHHhccCCCC
Q 023021 246 AIIYNK--DHGWDDHW---IF-WVGPFIGAA-LAALYHQVVIRAIPFK 286 (288)
Q Consensus 246 ~l~~~~--~~~w~~~w---vy-~vap~~Gai-~a~~~~~~~~~~~~~~ 286 (288)
.++.+. +..|.+.+ ++ .+|.++|+. +-++.|.+.++.+..|
T Consensus 208 ~~~~g~~~~~t~~~~~~nlipvtlGNiiGG~~fvgl~y~~~~~~~~~~ 255 (261)
T 4fc4_A 208 SWFGHHSDAYTLAGIGHNLLWVTLGNTLSGVVFMGLGYWYATPKSELE 255 (261)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHC------
T ss_pred HHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 333322 13444322 22 278888764 5667777777655544
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=54.47 E-value=1.1e+02 Score=26.54 Aligned_cols=103 Identities=16% Similarity=0.174 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHhccC-ccccccchHHHHHHHHhcCCccchhHHHHHHHhHHHHHHHHHHHHHhc-CccccccCCC--c
Q 023021 93 AWAFGGMIFALVYCTAG-ISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG-AGQYGRLGGG--A 168 (288)
Q Consensus 93 ~~a~g~~v~~~~~~~~~-~sGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~-~~~~~~~~~~--~ 168 (288)
++.+.+.+.++++.-+. .||--+- ++ ..+.+|.+|.+..--|.-=.+|=++|+.++-.+.. ...+...++. .
T Consensus 71 g~~F~vGL~lVvl~g~ELFTgn~l~---~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~ 146 (280)
T 3kly_A 71 GLAFSLGLILVVITGGELFTSSVLI---LV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGL 146 (280)
T ss_dssp HHHHHHHHHHHHHHTCCCTTTTCCC---CS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHH
T ss_pred HHHHHHHHHHHHHccccccccchHH---HH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHHH
Confidence 45555555555555444 3443332 22 23457888887776666655666655555544421 0111110000 0
Q ss_pred c--cc---cCCCCCcchhhHHHHHHHHHHHHHHhhc
Q 023021 169 N--AV---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (288)
Q Consensus 169 ~--~~---~~~~s~~~~~~~E~i~T~iLv~~vl~~~ 199 (288)
. .. -.+.+..+.|+-=.+|-++..+.++...
T Consensus 147 ~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 182 (280)
T 3kly_A 147 NAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTF 182 (280)
T ss_dssp HHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 1123445666666677777776666654
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.42 E-value=6.1 Score=35.38 Aligned_cols=21 Identities=33% Similarity=0.558 Sum_probs=17.3
Q ss_pred cCccccccchHHHHHHHHhcC
Q 023021 108 AGISGGHINPAVTFGLFLARK 128 (288)
Q Consensus 108 ~~~sGah~NPavTl~~~~~g~ 128 (288)
+.=||||++||++++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 444789999999999999753
Done!