BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023022
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGU7|RNZN_ARATH Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3
Length = 280
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/276 (75%), Positives = 240/276 (86%)
Query: 13 RGMQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLP 72
+ MQ++GY +EGLSI GHETCIIFPSL +AFDIGRCP RA+SQ+FLFISH+HMDHIGGLP
Sbjct: 5 KAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLP 64
Query: 73 MYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDL 132
MYVATRGLY+MKPPTIIVP+ IKE VE LFEVHR++D SEL H LVGLD+GEEF +RKDL
Sbjct: 65 MYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDL 124
Query: 133 FVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTG 192
VKAFKT+HVIQSQGYVVYS K KLK+EY+GL G+EIK LK SG EIT ++ TPEVAFTG
Sbjct: 125 KVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEVAFTG 184
Query: 193 DTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAI 252
DT SDF+VDE N D L+A++LVMEST++DDS +VE ARDYGH H+SEIV +AEKFENKAI
Sbjct: 185 DTTSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEIVNHAEKFENKAI 244
Query: 253 LLIHFSARHKVDEIRRAVDAVPAPLAGRVFALTEGF 288
LLIHFSAR+ V EI AV A+P PL GRVFALT+GF
Sbjct: 245 LLIHFSARYTVKEIEDAVSALPPPLEGRVFALTQGF 280
>sp|Q8L633|RNZC_ARATH Ribonuclease Z, chloroplastic OS=Arabidopsis thaliana GN=CPZ PE=2
SV=1
Length = 354
Score = 338 bits (867), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 150/276 (54%), Positives = 211/276 (76%)
Query: 13 RGMQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLP 72
+G++L+ Y +EG+S+ GHETC+I P L FDIGRCPSRA+ Q FLFI+HAH+DHIGGLP
Sbjct: 74 KGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLP 133
Query: 73 MYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDL 132
MYVA+RGLY ++PP I VP IKEDVE+L E+HR M ELN L+ L VGE + +R D+
Sbjct: 134 MYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRNDI 193
Query: 133 FVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTG 192
V+ F T+HVI SQGYV+YSV++KL+++Y L G +I+K+K SG EIT T+ +PE+AFTG
Sbjct: 194 VVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFTG 253
Query: 193 DTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAI 252
DT S++++D N D LRA++L+ E+T++D+S + E A+ GHTH+S+I+E A+ +K +
Sbjct: 254 DTTSEYMLDPRNADALRAKVLITEATFLDESFSTEHAQALGHTHISQIIENAKWIRSKTV 313
Query: 253 LLIHFSARHKVDEIRRAVDAVPAPLAGRVFALTEGF 288
LL HFS+R+ V+EIR AV + + ++ +V LTEGF
Sbjct: 314 LLTHFSSRYHVEEIREAVLKLQSKVSAKVIPLTEGF 349
>sp|P60193|RNZN_WHEAT Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum GN=ELAC PE=1
SV=1
Length = 176
Score = 277 bits (709), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 151/170 (88%)
Query: 15 MQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMY 74
++++GY VEG+SI GHETC+IFP+L LAFDIGRCP RA++Q+FLFISHAH+DHIGGLPMY
Sbjct: 7 LEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVAQDFLFISHAHLDHIGGLPMY 66
Query: 75 VATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFV 134
VATRGLYR++PPTI VP ++E VE+LF+VHR MD SELNHTLV LD+GEE+ +R+DL V
Sbjct: 67 VATRGLYRLRPPTIFVPKYLRELVERLFDVHRAMDQSELNHTLVPLDIGEEYELRRDLKV 126
Query: 135 KAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVT 184
+AFKTYH I SQGYV+YSVKQKLKQ+YLGLPG EIK+LK SG EIT TVT
Sbjct: 127 RAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT 176
>sp|B9LQT0|RNZ_HALLT Ribonuclease Z OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM
5036 / JCM 8891 / ACAM 34) GN=rnz PE=3 SV=1
Length = 310
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 111/258 (43%), Gaps = 38/258 (14%)
Query: 41 LAFDIGRCPSRALSQ-------NFLFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPS 92
L FD G R + + + LF+SH H DH+ G+P V T G R +P TI P
Sbjct: 33 LLFDCGEGTQRGMMRFGTGFGIDHLFVSHLHGDHVLGIPGLVQTLGFNDRAEPLTIHCPP 92
Query: 93 CIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYS 152
++D+ L VH + + GE V+AF+T H +SQGYV+
Sbjct: 93 GTEDDLHDL--VHAVGHDPAFQIRIESVAPGEVALDADGYEVRAFETVHRTKSQGYVLEE 150
Query: 153 VKQ-----KLKQEYLGLP----------GDEIKKLKSSGTEITYTVTTPEVA----FTGD 193
+ + K E LG+P G+ ++ S E V P +T D
Sbjct: 151 DDRPGRFDRPKAEELGVPVGPKFGRLHEGEPVEAEDGSIVEPDQVVGPPRPGRKFVYTAD 210
Query: 194 TMSDFIVDEANIDVLR-ARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAI 252
T E + V A +LV ++T+ DD ++ARD H+ E AE+ K +
Sbjct: 211 TRP----REGTVAVAEDADLLVHDATFADDME--DRARDTAHSTGREAGSVAERAGAKRL 264
Query: 253 LLIHFSARHKVD--EIRR 268
L+H S+R+ D IRR
Sbjct: 265 ALVHISSRYAADASPIRR 282
>sp|Q49XV1|RNZ_STAS1 Ribonuclease Z OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=rnz PE=3 SV=1
Length = 306
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP + +R KP T+I P IK +E R+ S+LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLTSRSFQGGEGKPLTLIGPKGIKAYIETTL----RLSESKLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVKQKLKQEYLGL------PGDE 168
+ +++ + + F V+A H I S GY + + K + L PG +
Sbjct: 115 PITYIEIENHLSYQNNGFNVEAHMLNHGIPSFGYRIEAPYTSGKIDVSALKEIGLEPGPK 174
Query: 169 IKKLKSSGT----EITYT--------VTTPEVAFTGDTM----SDFIVDEANIDVLRARI 212
+ +K++ T I Y V P +A GDTM + I D AN +
Sbjct: 175 YQDVKNNETFEYNGIIYNSKDFKGDAVKGPVIAIFGDTMPCQNEEIIADHAN-------V 227
Query: 213 LVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDE---IRRA 269
+V ESTY++ ++ A +Y H+H+ ++ E L+ H S R+ ++E I ++
Sbjct: 228 MVHESTYIEGDKSL--ANNYHHSHIEDVFTLIENAHVDYSLITHMSNRYTIEEVETISKS 285
Query: 270 VDAVPA 275
+ ++P
Sbjct: 286 LKSLPT 291
>sp|B9DNT1|RNZ_STACT Ribonuclease Z OS=Staphylococcus carnosus (strain TM300) GN=rnz
PE=3 SV=1
Length = 306
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 56 NFLFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSEL 113
N +FI+H H DHI GLP + +R KP TI+ P IK VE + S L
Sbjct: 57 NHIFITHMHGDHIYGLPGLLTSRSFQGGENKPLTIVGPRGIKNYVETTLQASL----SRL 112
Query: 114 NHTLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVKQKLKQEYLGL------PG 166
N+ + +++ ++ + F V A+ H + S GY + + K + L PG
Sbjct: 113 NYPVTFIEIDDQLHYHHEGFTVSAYNLNHGVPSFGYRIEAPTTSGKIDVASLREIGMEPG 172
Query: 167 DEIKKLKSSGTEI----TYTVTT--------PEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++K+S + I Y + P++A GDTM +E + A +LV
Sbjct: 173 PKYQEVKNSDSFIFNDKVYQSSDFKGEEKVGPKIAIFGDTMP--CENELKL-ADNADLLV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEI 266
E+TY+D ++ A + H+H+++++ E +K LL H S R+ + +I
Sbjct: 230 HEATYIDGDRSL--ADSHHHSHINDVLHLLEATNSKQALLNHISNRYNLSDI 279
>sp|A4YHP1|RNZ_METS5 Ribonuclease Z OS=Metallosphaera sedula (strain ATCC 51363 / DSM
5348) GN=rnz PE=3 SV=1
Length = 291
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 64/282 (22%)
Query: 11 SGRGMQLQGYKVEGLSI-----AGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHM 65
S RG+ + EGLSI G + +I SL++ ++ N + I+H H
Sbjct: 15 SRRGLPAYLVRREGLSILMDCGEGTQITMIRNSLNI-----------MNVNVIAITHLHA 63
Query: 66 DHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGE 124
DH+ GLP + T G+Y R + I+ P +K+ + + FE T +
Sbjct: 64 DHVLGLPSLIQTMGMYDRKERLYILGPEGLKDLLTETFE-----------RTYFSPNFPI 112
Query: 125 EFCM---RKDLFVKAFKTYHVIQSQGYVVYSV------KQKLKQEYLGLPGDEIKKLKSS 175
EF + + V+ F+T HV+ SQGY+V ++L++E G+ + ++
Sbjct: 113 EFVSSYESQGIRVRPFRTCHVVPSQGYLVEEKDTANLDAERLRRE--GVTDWRVMRMLKE 170
Query: 176 GTEITY--TVTTPE----------VAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDS 223
G E+ + V PE +A+TGDT E I+ ++ L++
Sbjct: 171 GKEVPWGDRVLKPEDYLIVKRGIRIAYTGDTRP----CETVINSVKGVDLLLH------D 220
Query: 224 TTVEQ---ARDYGHTHLSEIVEYAEKFENKAILLIHFSARHK 262
+T EQ A +YGH+ +E A + E K + LIH SAR++
Sbjct: 221 STFEQGIDASEYGHSTSTEAATVAREAEVKRLALIHISARYR 262
>sp|Q973F1|RNZ_SULTO Ribonuclease Z OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545
/ NBRC 100140 / 7) GN=rnz PE=3 SV=1
Length = 293
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 38 SLDLAFDIGR-CPSRALSQNFLF-------ISHAHMDHIGGLPMYVATRGLYRMKPPTII 89
D FD G R + N F I+H H DH+ GLP + T G+Y K ++
Sbjct: 28 GFDALFDCGEGTQWRMMEHNLSFMKIKLIGITHMHGDHVLGLPGMIETMGMYSRKESLLL 87
Query: 90 V-PSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGY 148
+ P +KE +E +F + + N + +D E+ +++ + F+T H I+SQGY
Sbjct: 88 MGPKELKEFLEDIF----KKTYFYPNFEIQIIDKYED----ENIKISTFETCHTIESQGY 139
Query: 149 VVYSVKQKLKQEYLGLPGDEIKKLK-------SSGTEITYTVTTPE----------VAFT 191
++ K +LK + L + IK + EI V PE +A+T
Sbjct: 140 -LFEEKDRLKIDIDKLRKEGIKDWRIIRMLKEGKRVEINGKVLLPEDYLIVKKGIRIAYT 198
Query: 192 GDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKA 251
GDT V A DV +L+ +ST++D+ ++A YGH++ + A K K
Sbjct: 199 GDTGPCEKVINAVKDV---DLLIHDSTFIDE----KEAYKYGHSNSYDAAYVALKANVKR 251
Query: 252 ILLIHFSARH 261
+ L H S R+
Sbjct: 252 LALFHISPRY 261
>sp|Q4J9A4|RNZ_SULAC Ribonuclease Z OS=Sulfolobus acidocaldarius (strain ATCC 33909 /
DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rnz
PE=3 SV=1
Length = 292
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 56 NFLFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELN 114
N + ISH H DH+ GLP + T +Y R + ++ P+ +++ ++ S
Sbjct: 54 NLIGISHLHGDHVLGLPGIIQTMAMYSRQQKLLLMGPTTLQDYLK-----------SSSK 102
Query: 115 HTLVGLDVGEEFCMR---KDLFVKAFKTYHVIQSQGYVVYSV-KQKLKQEYLGLPGDE-- 168
HT EF ++L + F+T H I+S G+++ K K+ E L G
Sbjct: 103 HTYFKPGFETEFIQSYEDQNLTITTFRTCHTIESYGFLIKEKDKTKVDAERLKKEGITDW 162
Query: 169 --IKKLKSSG-TEITYTVTTPE----------VAFTGDTMSDFIVDEANIDVLRARILVM 215
I+KLK EI V PE +A+TGDT D + +L+
Sbjct: 163 RIIRKLKEGKRVEIDTKVFLPEDYLYVKKGLSIAYTGDTAP---CDSVLNAIKGVDLLIH 219
Query: 216 ESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDE 265
+ST++++ +A DYGH++ ++ E A K + K + L H S R++ E
Sbjct: 220 DSTFLNE----REAHDYGHSNCTDAAEIASKADVKRLALYHISGRYQTTE 265
>sp|Q9HN60|RNZ_HALSA Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=rnz PE=3 SV=1
Length = 308
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 60/262 (22%)
Query: 43 FDIGRCPSRALSQ-------NFLFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCI 94
FD G R + + + +FI+H H DH+ GLP V T R P TI VP +
Sbjct: 35 FDAGEATQRQMMRYKTGFGVSDVFITHGHGDHVFGLPGLVHTWDFNDRTDPLTIHVPRGL 94
Query: 95 KEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRK-----------DLFVKAFKTYHVI 143
+ D+E L G DVG + + D V+AF+T H
Sbjct: 95 RGDIEDLV-------------FSAGGDVGYPVRITEATPGAVVRSHDDYEVRAFETAHST 141
Query: 144 QSQGYVVYSVKQ-----KLKQEYLGLP-GDEIKKLKSSGTEITY---TVTTPE------- 187
S GY + + + + E LG+P G + L G + TV +PE
Sbjct: 142 ASVGYALVEDDRTGRFDRARAEELGVPVGPKFSTLH-DGQPVELDDGTVVSPEQVVGDPR 200
Query: 188 ----VAFTGDTMS-DFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVE 242
+ +TGDT D +V A A +L+ ++T+ +D++ E+A + GH+ E +
Sbjct: 201 PGRTLVYTGDTRPHDPVVSAAE----DADLLIHDATFANDAS--ERAAETGHSTAGEAAD 254
Query: 243 YAEKFENKAILLIHFSARHKVD 264
A + KA+ L H S+R+ D
Sbjct: 255 VATEAGAKALALTHVSSRYAGD 276
>sp|B0R7E2|RNZ_HALS3 Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 29341 / DSM
671 / R1) GN=rnz PE=3 SV=1
Length = 308
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 60/262 (22%)
Query: 43 FDIGRCPSRALSQ-------NFLFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCI 94
FD G R + + + +FI+H H DH+ GLP V T R P TI VP +
Sbjct: 35 FDAGEATQRQMMRYKTGFGVSDVFITHGHGDHVFGLPGLVHTWDFNDRTDPLTIHVPRGL 94
Query: 95 KEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRK-----------DLFVKAFKTYHVI 143
+ D+E L G DVG + + D V+AF+T H
Sbjct: 95 RGDIEDLV-------------FSAGGDVGYPVRITEATPGAVVRSHDDYEVRAFETAHST 141
Query: 144 QSQGYVVYSVKQ-----KLKQEYLGLP-GDEIKKLKSSGTEITY---TVTTPE------- 187
S GY + + + + E LG+P G + L G + TV +PE
Sbjct: 142 ASVGYALVEDDRTGRFDRARAEELGVPVGPKFSTLH-DGQPVELDDGTVVSPEQVVGDPR 200
Query: 188 ----VAFTGDTMS-DFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVE 242
+ +TGDT D +V A A +L+ ++T+ +D++ E+A + GH+ E +
Sbjct: 201 PGRTLVYTGDTRPHDPVVSAAE----DADLLIHDATFANDAS--ERAAETGHSTAGEAAD 254
Query: 243 YAEKFENKAILLIHFSARHKVD 264
A + KA+ L H S+R+ D
Sbjct: 255 VATEAGAKALALTHVSSRYAGD 276
>sp|Q8Q032|RNZ_METMA Ribonuclease Z OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM
3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=rnz PE=3 SV=1
Length = 305
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 41 LAFDIG--------RCPSRALSQNFLFISHAHMDHIGGLPMYVATRG-LYRMKPPTIIVP 91
L FD G R + +S + +F+SH H DH G+P + T L R +P TI P
Sbjct: 32 LLFDCGEGTQQQMMRAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFLGRKEPLTIYGP 91
Query: 92 SCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGE-EFCMRKDLFVKAFKTYHVIQSQGYVV 150
KE EV + + + L + + G+++ + K+ V+A KT H S GY +
Sbjct: 92 EGTKE----FTEVFKVLGYCNLKYEVRGVELSPGDIVEGKNYVVRALKTEHSTPSLGYSL 147
Query: 151 YSVKQ-----KLKQEYLG-LPGDEIKKL-KSSGTEITYTVTTPE-----------VAFTG 192
+ + K LG LPG KL K + E+ + PE V ++G
Sbjct: 148 IENPRPGRFNREKAVELGVLPGPLFAKLQKGNPVEVNGKLVKPEEVVGAPRPGRTVVYSG 207
Query: 193 DTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAI 252
DT V EA+ D A +L+ + ++ D+ A + H+ E+ A++ + +
Sbjct: 208 DTRPCEAVLEASRD---ADVLIHDGSFADEMAG--WAEESMHSTAGEVASLAKEAGVRQL 262
Query: 253 LLIHFSARHKVD 264
+L H S+R+ D
Sbjct: 263 VLTHISSRYTDD 274
>sp|A8Z2D7|RNZ_STAAT Ribonuclease Z OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=rnz PE=3 SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|A6QH51|RNZ_STAAE Ribonuclease Z OS=Staphylococcus aureus (strain Newman) GN=rnz PE=3
SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q5HFR8|RNZ_STAAC Ribonuclease Z OS=Staphylococcus aureus (strain COL) GN=rnz PE=3
SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q2FY67|RNZ_STAA8 Ribonuclease Z OS=Staphylococcus aureus (strain NCTC 8325) GN=rnz
PE=3 SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q2FGM9|RNZ_STAA3 Ribonuclease Z OS=Staphylococcus aureus (strain USA300) GN=rnz PE=3
SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|P60197|RNZ_STAAN Ribonuclease Z OS=Staphylococcus aureus (strain N315) GN=rnz PE=3
SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|P60196|RNZ_STAAM Ribonuclease Z OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=rnz PE=3 SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|A5IT32|RNZ_STAA9 Ribonuclease Z OS=Staphylococcus aureus (strain JH9) GN=rnz PE=3
SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|A6U1X3|RNZ_STAA2 Ribonuclease Z OS=Staphylococcus aureus (strain JH1) GN=rnz PE=3
SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|A7X2M2|RNZ_STAA1 Ribonuclease Z OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=rnz PE=3 SV=1
Length = 306
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q6GGJ4|RNZ_STAAR Ribonuclease Z OS=Staphylococcus aureus (strain MRSA252) GN=rnz
PE=3 SV=1
Length = 306
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPIVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q2YYA2|RNZ_STAAB Ribonuclease Z OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=rnz PE=3 SV=1
Length = 306
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H I S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPIVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q8NWE6|RNZ_STAAW Ribonuclease Z OS=Staphylococcus aureus (strain MW2) GN=rnz PE=3
SV=1
Length = 306
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H + S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGVPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q6G960|RNZ_STAAS Ribonuclease Z OS=Staphylococcus aureus (strain MSSA476) GN=rnz
PE=3 SV=1
Length = 306
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 34/233 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP +++R KP T++ P IK V E+ + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYV----EMSMNLSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ + D F V+A H + S GY V + + + LK +GL PG
Sbjct: 115 PITYIEIDDHLTYHHDGFTVEAHLLNHGVPSYGYRVMAPETTGTINVEALKN--IGLEPG 172
Query: 167 DEIKKLKSSGT-EITYTV-----------TTPEVAFTGDTMSDFIVDEANIDVLRARILV 214
+ +++KS T E V P VA GDT + A ++V
Sbjct: 173 PKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKP---CSNERVISRDADVMV 229
Query: 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
E+TY+D + A +Y H+H+ ++ ++ K L+ H S R+ ++I
Sbjct: 230 HEATYIDGEKHL--ANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDIN 280
>sp|Q5UZJ9|RNZ_HALMA Ribonuclease Z OS=Haloarcula marismortui (strain ATCC 43049 / DSM
3752 / JCM 8966 / VKM B-1809) GN=rnz PE=3 SV=1
Length = 311
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 43/277 (15%)
Query: 32 TCIIFPSLD---LAFDIGRCPSRALSQ-------NFLFISHAHMDHIGGLPMYVATRGLY 81
T IF + D L FD G R + + + LF++H H DH+ G+P + T
Sbjct: 21 TSSIFVNRDGDYLLFDCGEGTQRQMMRYGTGFAIDHLFVTHLHGDHVLGIPGLLQTWDFN 80
Query: 82 -RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTY 140
R + I P+ + +++QL + + + + + G+ R + ++A +T
Sbjct: 81 ERERAIAIHTPAGTRGNIKQLIQANGTTPSFPVR--INEVSAGDVVLDRSEYEIRAIETA 138
Query: 141 HVIQSQGYVVYSVKQKLK------QEYLGL-PGDEIKKL-KSSGTEITYTVTTPEV---- 188
H S GYV+ +K K +E G+ PG + KL + E PE
Sbjct: 139 HRCASVGYVLDEDDRKGKFDREKAEEEFGIPPGPKYSKLHRGEAVEHEGETIQPEAVVGP 198
Query: 189 -------AFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIV 241
+TGDT+ V EA+ D A +LV ++T+ +D E+A+ H+ E
Sbjct: 199 ARPGRRFVYTGDTLPTESVIEASED---ADLLVHDATFAEDRK--ERAKATAHSTAREAA 253
Query: 242 EYAEKFENKAILLIHFSARHK------VDEIRRAVDA 272
+ A + + L H S R+ VDE R A D
Sbjct: 254 DVARQAGASTLALTHISTRYAASADELVDEARDAFDG 290
>sp|Q65HN6|RNZ_BACLD Ribonuclease Z OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=rnz PE=3 SV=1
Length = 307
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLYRMKPP-TIIVPSCIKEDVEQLFEVHRRMDHSELNHT 116
+FI+H H DH+ GLP V++R + P T+ P IK +E +V + + +
Sbjct: 59 IFITHLHGDHVYGLPGLVSSRSFQGGEGPLTVYGPQGIKTFLETALDV----SGTHVTYP 114
Query: 117 LVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVY--SVKQKLKQEYL---GL-PGDEI 169
LV ++GE D F V A H I + GY V V L E L G+ PG
Sbjct: 115 LVIKEIGEGTVFEDDQFIVTARSVSHGIPAFGYRVQEKDVPGALDAEALKEIGVSPGPVY 174
Query: 170 KKLKSSGTEITYT----------VTTPE----VAFTGDTMSDFIVDEANIDVL--RARIL 213
+KLK+ G +T + P+ VAF+GDT N+ L +A +L
Sbjct: 175 QKLKN-GETVTLEDGRTIHGADFIGPPKKGRIVAFSGDTRPC-----ENVKRLAEKADVL 228
Query: 214 VMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIRRAVDAV 273
+ E+T+ E A DY H+ + E A + K ++L H SAR++ + + VD
Sbjct: 229 IHEATFAKGDR--ELAGDYYHSTSEQAAETAREACAKKLILTHISARYQGENVLELVDEA 286
Query: 274 PA 275
A
Sbjct: 287 KA 288
>sp|Q3IRM5|RNZ_NATPD Ribonuclease Z OS=Natronomonas pharaonis (strain DSM 2160 / ATCC
35678) GN=rnz PE=3 SV=1
Length = 308
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 59 FISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTL 117
FI+H H DHI GLP + T R +P ++ VPS + ++ L + ++ +
Sbjct: 58 FITHLHGDHILGLPGLLQTMDFNDREEPLSVYVPSGKQAELRDLIDTAAGAPSFPVH--V 115
Query: 118 VGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQK-----LKQEYLGLP-GDEIKK 171
G+ G+ D ++AF+T H +S GY + +K + E LG+P G + ++
Sbjct: 116 NGVSDGQVVVDADDYEIRAFETDHDARSLGYALIEASRKGRFDRERAEELGVPVGPKFQQ 175
Query: 172 LKSS-GTEI-TYTVTTPE-----------VAFTGDTMSDFIVDEANIDVLRARILVMEST 218
L + E+ TV PE V +TGDT D A +L+ ++T
Sbjct: 176 LHAGEAVELEDGTVVEPEQVVGDPRPGRRVVYTGDTRP---TDRTVTVAENADLLIHDAT 232
Query: 219 YVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVD 264
+ D+ ++A H+ +E + A + + + + L+H S+R+ D
Sbjct: 233 FATDN--ADRAARTAHSTAAEAADIASRADARRLALVHISSRYAGD 276
>sp|A4FXT9|RNZ_METM5 Ribonuclease Z OS=Methanococcus maripaludis (strain C5 / ATCC
BAA-1333) GN=rnz PE=3 SV=1
Length = 314
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 43 FDIGRCPSR--------ALSQNFLFISHAHMDHIGGLP---MYVATRGLYRMKPPTIIVP 91
FD G R + N +FISH H DH+ G+P +A +G R KP I P
Sbjct: 33 FDCGENTQRQIIFTDVSPMKINNIFISHLHGDHVLGIPGLLQSIAFQG--RTKPLNIYGP 90
Query: 92 SCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151
+ ++ + V +N + E+ + V +F H + + YV
Sbjct: 91 EETAKMIKNILNVGYHSIDYPINVYEISSKTSEKIISTDNYDVFSFPVVHSVPAVAYVFR 150
Query: 152 SVKQKL----KQEYLGLP-GDEIKKLKSS-GTEITYTVTTPE-----------VAFTGDT 194
VK+ K LG+ G ++K+LK E+ + TPE V ++GDT
Sbjct: 151 QVKKPRMDLEKVNKLGIEIGPDLKRLKDGYNVELNGKIITPEDVTLPPKKGICVGYSGDT 210
Query: 195 M-----SDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFEN 249
+ +DF+ + L+ IL+ E+T+ D T + A++ H+ + + + A++
Sbjct: 211 IPLNEFADFLKE------LKCTILIHEATF--DKTMDKNAKETLHSTVHDALNIAKRSGA 262
Query: 250 KAILLIHFSARH 261
++L H SAR+
Sbjct: 263 NTVILTHISARY 274
>sp|B9E6P2|RNZ_MACCJ Ribonuclease Z OS=Macrococcus caseolyticus (strain JCSC5402) GN=rnz
PE=3 SV=1
Length = 306
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 36/249 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FISH H DHI GLP + +R + K T+ P+ +K+ V+ + + S LN+
Sbjct: 59 IFISHLHGDHIFGLPGVLTSRSFQGGQDKKLTLYGPTGLKQFVDTVLTI----SCSHLNY 114
Query: 116 TL--VGLDVGEEFCMRK-DLFVKAFKTYHVIQSQGYVVYS-------VKQKLKQEYLGLP 165
L + +D G+EF + ++ V A K H I S GY + +K+KL E + P
Sbjct: 115 PLEIIEIDHGDEFVINDIEITVGALK--HGIPSFGYRIVMPDTAGNLIKEKLIAEGIA-P 171
Query: 166 GDEIKKLK------------SSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARIL 213
G K+ K ++ T ++ F GDTM +E ++ A ++
Sbjct: 172 GPVYKEFKLHEQVTLNGKIYNTKDFKTAGKKGKKLVFFGDTMP--CENEVSL-AENADVV 228
Query: 214 VMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIRRAVDAV 273
V E TY+D VE + Y H+H+ +++ K +++ H S R+ +I R + +
Sbjct: 229 VHECTYLDGD--VELSHKYCHSHIDDVLSLVSSGSVKKLIINHVSNRYTTKDINRLLAEI 286
Query: 274 PAPLAGRVF 282
VF
Sbjct: 287 NTKTECEVF 295
>sp|Q4L6K4|RNZ_STAHJ Ribonuclease Z OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=rnz PE=3 SV=1
Length = 306
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP + +R KP T+I P + +Q E R+ S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLTSRSFQGGEDKPLTVIGPRGL----QQFIETTLRLSESHLNY 114
Query: 116 TLVGLDVGEEFCMR-KDLFVKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGL-PG 166
+ +++ F K + A H I S GY + S + LK +GL PG
Sbjct: 115 PITYIEIDNHFTYHHKGFSISAHLLNHGIPSYGYRIESPTTPGTIDVEALKS--IGLYPG 172
Query: 167 DEIKKLKS------------SGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLR-ARIL 213
+ +++KS S P ++ GDT ++ + + + + ++
Sbjct: 173 PKYQEVKSYDNFEHEGQVYNSDDFKGPAKPGPIISIFGDTKPC----QSELSIAKDSDVM 228
Query: 214 VMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR 267
+ E+TY++ T+ A +Y H+H+ ++ E ++ K L+ H S R+ + I+
Sbjct: 229 IHEATYIEGEKTL--ANNYHHSHIEDVFELIKQANVKRCLITHLSNRYNHENIQ 280
>sp|Q97Z88|RNZ_SULSO Ribonuclease Z OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM
1617 / JCM 11322 / P2) GN=rnz PE=3 SV=1
Length = 291
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 36/222 (16%)
Query: 60 ISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLV 118
ISH H DH+ GL +A+ GL R + I+ P +K+ + FE +S+ N +
Sbjct: 59 ISHMHGDHVFGLLGVIASMGLLDRKETLYILGPRKLKDFLYTSFE------YSKFNPSF- 111
Query: 119 GLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDE------IKKL 172
++ + + +++ + FKT H I+SQGY++ K ++K + L ++ I+KL
Sbjct: 112 KIEFIDNYN-DENITISTFKTCHTIESQGYLIME-KDRVKIDEEKLEKEKIRDWRVIRKL 169
Query: 173 KSSGT-EITYTVTTPE----------VAFTGDTM-SDFIVDEANIDVLRARILVMESTYV 220
K T E + PE VA+TGDTM +VD V IL+ +ST++
Sbjct: 170 KEGKTVEYNGKLLKPEDYLVIKRGSKVAYTGDTMPCQSVVDS----VKGVDILIHDSTFL 225
Query: 221 DDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHK 262
D+ + A YGH+++++ + A + K + L H S R++
Sbjct: 226 DEPS----AYTYGHSNVTDAAKIALEASVKLLALTHISPRYE 263
>sp|B1YLU8|RNZ_EXIS2 Ribonuclease Z OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=rnz PE=3 SV=1
Length = 301
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 39/269 (14%)
Query: 33 CIIFPSLDLAFDIGRC--------PSRALSQNFLFISHAHMDHIGGLPMYVATR-GLYRM 83
++ P + FD G P + + +FI+H H DHI GLP +++TR L
Sbjct: 23 ALLHPKMTWLFDCGEATQHQMLHSPIKPRKVSTIFITHLHGDHIFGLPGFISTRAALEGT 82
Query: 84 KPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLF---VKAFKTY 140
TI P IKE +E R+ + L + L ++V ++ F V+A +
Sbjct: 83 TLLTIFGPKGIKEWLEATL----RITGTYLRYPLDVIEVEAGQTYEQEGFHIHVEALE-- 136
Query: 141 HVIQSQGYVVYSVKQK-------LKQEYLGLP-GDEIKKLKSS------GTEITYT--VT 184
H + GY + ++K LKQ LG+P G +++K GTE T +
Sbjct: 137 HRFLAYGYRIEGQEEKGALHVEALKQ--LGVPSGPLYRQIKQKETFVFEGTEYQSTDFLG 194
Query: 185 TPEVAFTGDTMSDFIVDEANIDVL-RARILVMESTYVDDSTTVEQARDYGHTHLSEIVEY 243
P+ + D + E ++ + + +LV E+T+ D + A +GH+ + E
Sbjct: 195 EPKPGIKLAVLGDTVPCEGSLRLAEKVDVLVHEATFADSEQ--DHAGRFGHSTARQAAEI 252
Query: 244 AEKFENKAILLIHFSARHKVDEIRRAVDA 272
A K K +LL H SAR+ E R +A
Sbjct: 253 ALKAGVKKLLLTHISARYVDQEQRLEAEA 281
>sp|O58883|RNZ_PYRHO Ribonuclease Z OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rnz PE=3 SV=1
Length = 307
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 110/245 (44%), Gaps = 30/245 (12%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLYRMKPPT-IIVPSCIKEDVEQLFEVHRRMDHSELNHT 116
+FI+H H DH GLP + T L++ K P I P ++ L ++
Sbjct: 57 VFITHFHGDHYLGLPALIQTMSLWKRKDPLHIYGPEGSSTFLQNLLNSGYFAPSFDI--- 113
Query: 117 LVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQK----LKQ-EYLGL-PGDEIK 170
LV G+ K+ V AF+ H + + GYV ++ LK+ + LGL PG +K
Sbjct: 114 LVHEISGKSRLKFKEYEVWAFEVSHGVPALGYVFKEKDKRGNFNLKKIKELGLEPGPWMK 173
Query: 171 KLKSSG-TEIT------YTVTTP-----EVAFTGDTMSDFIVDEANIDVLRARILVMEST 218
+L+ EI VT P +V ++GDT DE R +L+ E+T
Sbjct: 174 ELERQKIIEINGKIVRLLEVTGPKKRGAKVVYSGDTEP---CDEVIEFSRRGTLLIHEAT 230
Query: 219 YVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIR-RAVDAVPAPL 277
YV++ E +D HT + E E +K + + ++L H S R+ E + +A+ P +
Sbjct: 231 YVNE----EDRKDSYHTTIEEACEIWKKSKARKLVLFHRSPRYSFKEYKEKALSICPQAI 286
Query: 278 AGRVF 282
R F
Sbjct: 287 IPRDF 291
>sp|Q03W55|RNZ_LEUMM Ribonuclease Z OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=rnz PE=3 SV=1
Length = 318
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 44/253 (17%)
Query: 43 FDIGRCPSRALSQNFL--------FISHAHMDHIGGLPMYVATR---GLYRMKPPTIIVP 91
FD+G + + L FI+H H DHI GLP ++++R G + +P TI P
Sbjct: 36 FDVGEATQHQILKTTLRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQGADKNEPLTIYGP 95
Query: 92 SCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVV 150
+KE V+ R+ + L++ + +D+ E F V A H I++ G+ V
Sbjct: 96 KGVKEFVQTAL----RISETRLSYPIEYVDLTEGVIFEDHTFQVVAAPMRHRIETWGFRV 151
Query: 151 YS-------VKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVA------FTGDTMSD 197
+ KLKQ +P + +G TVT P+ F G
Sbjct: 152 IEKDHPGELLVDKLKQG--NIPSGPVYGQLKAGK----TVTLPDGRIVNGHDFIGKAQKG 205
Query: 198 ----FIVD---EANIDVL--RARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFE 248
FI+D N++ L A +LV ESTY + A+ + H+ + A +
Sbjct: 206 RIVTFILDTRPNDNVEWLAKNADVLVHESTYGSSEEEAKMAKAHAHSTSANAASVARRAH 265
Query: 249 NKAILLIHFSARH 261
++L H SAR+
Sbjct: 266 VNKLVLTHLSARY 278
>sp|Q58897|RNZ_METJA Ribonuclease Z OS=Methanocaldococcus jannaschii (strain ATCC 43067
/ DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rnz
PE=1 SV=2
Length = 317
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 30/233 (12%)
Query: 56 NFLFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELN 114
N +FI+H H DHI G+P + + G + R K I P KE +E ++ + E
Sbjct: 57 NHIFITHLHGDHILGIPGLLQSMGFFGREKELKIFGPEGTKEIIENSLKLGTH--YIEFP 114
Query: 115 HTLVGLDVGEEFCMRK--DLFVKAFKTYHVIQSQGYVVYSVKQKL----KQEYLGLP-GD 167
+ + E + K + + A+ T H I S Y+ +K+ K + LG+ G
Sbjct: 115 IKVYEIYTKEPITIYKEENYEIIAYPTEHGIPSYAYIFKEIKKPRLDIEKAKKLGVKIGP 174
Query: 168 EIKKLKSSGT--EITYTVTTPE-----------VAFTGDT--MSDFIVDEANIDVLRARI 212
++KKLK+ I + PE +A++GDT + DF + L +
Sbjct: 175 DLKKLKNGEAVKNIYGEIIKPEYVLLPPKKGFCLAYSGDTLPLEDF---GKYLKELGCDV 231
Query: 213 LVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDE 265
L+ E+T+ D + + A++ H+ + + V A+ KA++L H SAR+ +E
Sbjct: 232 LIHEATF--DDSAKDAAKENMHSTIGDAVNIAKLANVKALILTHISARYDKEE 282
>sp|Q8TLK5|RNZ_METAC Ribonuclease Z OS=Methanosarcina acetivorans (strain ATCC 35395 /
DSM 2834 / JCM 12185 / C2A) GN=rnz PE=3 SV=1
Length = 305
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 27/237 (11%)
Query: 47 RCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHR 106
R + +S + +F+SH H DH G+P + T K P +I + +LF +
Sbjct: 46 RAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFMGRKDPLMIYGPAGTREFTELF---K 102
Query: 107 RMDHSELNHTLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYSVKQ-----KLKQE 160
+ + L + + G+++ + + + V+A +T H S GY + + + K
Sbjct: 103 ALGYFNLKYEIHGMELKPGDVVEGEGYVVRALETEHSTPSLGYALIENPRPGRFNREKAV 162
Query: 161 YLGL-PGDEIKKL-KSSGTEITYTVTTPE-----------VAFTGDTMSDFIVDEANIDV 207
LG+ PG KL K + E V PE + ++GDT V EA+ D
Sbjct: 163 ALGVPPGPLFSKLQKGNPVEAGGKVVRPEEVMGTPRPGRTIVYSGDTRPCEAVLEASRD- 221
Query: 208 LRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVD 264
A +L+ + ++ D+ E A + H+ E+ A++ + ++L H S+R+ D
Sbjct: 222 --ADLLIHDGSFADE--MAEWAEESMHSTAGEVAALAKEAGVRKLVLTHISSRYTDD 274
>sp|A6VFJ7|RNZ_METM7 Ribonuclease Z OS=Methanococcus maripaludis (strain C7 / ATCC
BAA-1331) GN=rnz PE=3 SV=1
Length = 310
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 45/257 (17%)
Query: 43 FDIGRCPSR--------ALSQNFLFISHAHMDHIGGLP---MYVATRGLYRMKPPTIIVP 91
FD G R + N +FISH H DHI G+P +A +G R KP I P
Sbjct: 33 FDCGENTQRQIIFTDVSPMKINNIFISHLHGDHILGIPGLMQSIAFQG--RTKPLNIYGP 90
Query: 92 SCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151
+ +E + V +N + E+ + V +F H + + YV
Sbjct: 91 KETAKMIENILNVGYHSIDYPINVYEISAKSPEKIISSDNYEVFSFPVVHSVPALAYVFK 150
Query: 152 SVKQKL----KQEYLGLP-GDEIKKLKSS-GTEITYTVTTPE-----------VAFTGDT 194
VK+ K LG+ G ++K+LK E+ + TP+ V ++GDT
Sbjct: 151 QVKKPRMDLEKVNKLGIEIGPDLKRLKDGFNIELNGKIITPDDVTVPPKKGICVGYSGDT 210
Query: 195 M-----SDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFEN 249
+ ++F+ + L+ L+ E+T+ D + + A++ H+ +S+ + A+
Sbjct: 211 IPLNEFAEFLKE------LKCTTLIHEATF--DKSMDKNAKETLHSTVSDALNIAKLSGV 262
Query: 250 KAILLIHFSARHKVDEI 266
++L H SAR+ DEI
Sbjct: 263 NTVILTHISARY--DEI 277
>sp|Q8CSG7|RNZ_STAES Ribonuclease Z OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=rnz PE=3 SV=1
Length = 306
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 30/230 (13%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP + +R KP TII P I+ +E + + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPKGIQNYIETSLQ----LSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYS--VKQKLKQEYL---GL-PGDE 168
+ +++ ++ + F V+A H I S GY + + + + E L GL PG +
Sbjct: 115 PITYIEINQQLAYHHNGFTVQAEMLNHGIPSFGYRIEAPIMPGTINVEALRGIGLEPGPK 174
Query: 169 IKKLKSSGT----EITYTV--------TTPEVAFTGDTMSDFIVDEANIDVLRARILVME 216
+++K T + Y P ++ GDT +E + + +++ E
Sbjct: 175 YQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGDTKP--CENEYEL-AKNSDLMIHE 231
Query: 217 STYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEI 266
+TY++ + A +Y H+H+ ++ ++ L+ H S R+ +DE+
Sbjct: 232 ATYIEGDKKL--ANNYHHSHIDDVFNLIKQANVNKSLITHISNRYNIDEV 279
>sp|Q5HP47|RNZ_STAEQ Ribonuclease Z OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=rnz PE=3 SV=1
Length = 306
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 48/239 (20%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNH 115
+FI+H H DHI GLP + +R KP TII P I+ +E + + S LN+
Sbjct: 59 IFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPKGIQNYIETSLQ----LSESHLNY 114
Query: 116 TLVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVYS---------------------- 152
+ +++ ++ + F V+A H I S GY + +
Sbjct: 115 PITYIEINQQLAYHHNGFTVQAEMLNHGIPSFGYRIEAPITPGTINVEALRGIGLEPGPK 174
Query: 153 ---VKQKLKQEYLGL--PGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDV 207
VK + EY GL D+ K G P ++ GDT +E +
Sbjct: 175 YQEVKLQETFEYKGLIYNSDDFKGKAKPG---------PIISIFGDTKP--CENEYEL-A 222
Query: 208 LRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEI 266
+ +++ E+TY++ + A +Y H+H+ ++ ++ L+ H S R+ +DE+
Sbjct: 223 KNSDLMIHEATYIEGDKKL--ANNYHHSHIDDVFNLIKQANVNKSLITHISNRYNIDEV 279
>sp|C5A5S2|RNZ_THEGJ Ribonuclease Z OS=Thermococcus gammatolerans (strain DSM 15229 /
JCM 11827 / EJ3) GN=rnz PE=3 SV=1
Length = 314
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 108/262 (41%), Gaps = 58/262 (22%)
Query: 41 LAFDIGRCPSRALSQNFL--------FISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVP 91
+ FD+G R ++ L FI+H H DH GL + T L+ R KP I P
Sbjct: 32 ILFDVGEGTIRQMNSAKLSPMRVEKIFITHFHGDHYLGLGGLIQTMNLWNREKPLHIYGP 91
Query: 92 SCIKEDVEQL---------FEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHV 142
E V+ FEVH ++GE KD + +FK H
Sbjct: 92 KYTFEFVQNFLNSGFFRPGFEVHVH-------------ELGETRLKFKDYEIWSFKVEHG 138
Query: 143 IQSQGYVVYSVKQKLK------QEYLGLPGDEIKKLKSSGTEITYT--------VTTP-- 186
I + GYV ++ K +Y PG + KL+ G +I + VT P
Sbjct: 139 IPALGYVFKEKDKRGKFLPEKLAQYGLRPGPILGKLEKDG-KIEWNGQVIRLEDVTGPRR 197
Query: 187 ---EVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEY 243
+V +TGDT + + RA +L+ ++TY+ D ++ Y H+ + E E
Sbjct: 198 RGVKVVYTGDTEP---CERVRLFAERADLLIHDATYLSDG---DRGDSY-HSTVEEACET 250
Query: 244 AEKFENKAILLIHFSARHKVDE 265
A + + K + L H + R+ DE
Sbjct: 251 ARRAKVKLLALFHRAFRYTYDE 272
>sp|B2G6S0|RNZ_LACRJ Ribonuclease Z OS=Lactobacillus reuteri (strain JCM 1112) GN=rnz
PE=3 SV=1
Length = 309
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHT 116
+FI+H H DHI GLP +++R +P TI P IK V+ +V S L++
Sbjct: 59 IFITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGPVGIKRYVQTSLQV----SESRLSYP 114
Query: 117 LVGLDVGEEFCMRKD--LFVKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGLPGD 167
L +++ ++ + D V A K H I GY + +KL+++ +P
Sbjct: 115 LHFVEITDDGELFNDHGFRVIARKLDHKIACFGYRIEEADHPGELQVEKLREQK--VPSG 172
Query: 168 EIKKLKSSGTEITYT----------VTTPE----VAFTGDTMSDFIVDEANIDVLRARIL 213
I +G +T + TP+ +A GDT A + A +L
Sbjct: 173 PIYGQLKAGKTVTLPDGRVLDGHDFIGTPQPGRIIAILGDTRQ---TKNAILLAQNADVL 229
Query: 214 VMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARH 261
V EST+ D T + A +Y H+ + E A+K K +LL H SAR+
Sbjct: 230 VHESTFAKDETKM--AHNYYHSTSKQAAEIAKKAGVKKLLLNHISARY 275
>sp|A5VJA0|RNZ_LACRD Ribonuclease Z OS=Lactobacillus reuteri (strain DSM 20016) GN=rnz
PE=3 SV=1
Length = 309
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLY-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHT 116
+FI+H H DHI GLP +++R +P TI P IK V+ +V S L++
Sbjct: 59 IFITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGPVGIKRYVQTSLQV----SESRLSYP 114
Query: 117 LVGLDVGEEFCMRKD--LFVKAFKTYHVIQSQGYVVYSVK-------QKLKQEYLGLPGD 167
L +++ ++ + D V A K H I GY + +KL+++ +P
Sbjct: 115 LHFVEITDDGELFNDHGFRVIARKLDHKIACFGYRIEEADHPGELQVEKLREQK--VPSG 172
Query: 168 EIKKLKSSGTEITYT----------VTTPE----VAFTGDTMSDFIVDEANIDVLRARIL 213
I +G +T + TP+ +A GDT A + A +L
Sbjct: 173 PIYGQLKAGKTVTLPDGRVLDGHDFIGTPQPGRIIAILGDTRQ---TKNAILLAQNADVL 229
Query: 214 VMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARH 261
V EST+ D T + A +Y H+ + E A+K K +LL H SAR+
Sbjct: 230 VHESTFAKDETKM--AHNYYHSTSKQAAEIAKKAGVKKLLLNHISARY 275
>sp|A7MHT9|RBN_CROS8 Ribonuclease BN OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=rbn PE=3 SV=1
Length = 304
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 44/239 (18%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLYRMKPP-TIIVPSCIKEDVEQLFEVHRRMDHSELN-H 115
+FI+H H DHI GLP + +R + + P I P I E VE + LN H
Sbjct: 59 IFITHLHGDHIFGLPGLLCSRSMAGCETPLEIYGPKGIAEFVETTLRLSGSWTSYPLNVH 118
Query: 116 TLVG---LDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQ-------KLKQEYLGLP 165
+ LD GE L V A+ H ++ GY + + +LK + +P
Sbjct: 119 EITEGQLLDDGE-------LTVTAYPLTHPVECYGYRIEEQDKPGALDAARLKAAGV-MP 170
Query: 166 GDEIKKLKSSGTEITYT----------VTTP----EVAFTGDT--MSDFIVDEANIDVLR 209
G ++LK G +T ++ P ++A GDT + ++DV+
Sbjct: 171 GPLFQQLKR-GETVTLADGRTVCGADYLSAPRPGKKIAIFGDTGPTPQAVTLARDVDVM- 228
Query: 210 ARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIRR 268
V E+T ++ E+A GH+ + E A K +L+ HFS+R+ +E +R
Sbjct: 229 ----VHETTL--EAAMAEKANGRGHSTTQQAAEVARDAGAKRLLMTHFSSRYSAEECQR 281
>sp|Q8ZTJ7|RNZ_PYRAE Ribonuclease Z OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 /
DSM 7523 / JCM 9630 / NBRC 100827) GN=rnz PE=3 SV=1
Length = 287
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 45/236 (19%)
Query: 43 FDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLY--RMKPPTIIVPSCIKEDVEQ 100
IG PS S + ++H H DHI GLP V T R+K ++ P + + +
Sbjct: 48 LQIGISPS---SLTLIAVTHMHEDHILGLPGLVITSKFLGGRLK---VLAPKSMHGALSK 101
Query: 101 LFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVV-YSVKQKLK- 158
L G++V + + + +K + H + + G+++ + V KL
Sbjct: 102 L-----------------GVEVADSY-EEERFKIKCVEVCHTVDACGWLIQWDVGYKLDL 143
Query: 159 QEYLGLPGDEIKKL-KSSGTEITYTVTTPE------------VAFTGDTMSDFIVDEANI 205
+ GLP + +L K +I + TPE + +TGDT E
Sbjct: 144 SKTSGLPKWALTELIKGKPVKIGDRIITPEEVADPAHKRFKYLLYTGDTAP---CPEMWK 200
Query: 206 DVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARH 261
V +L+ E+T+ DD + +A + GH+ +++ +E A + ++L H SAR+
Sbjct: 201 KVGSVDVLIHEATFADD-VSPSKAHEEGHSTVADAIEAARALNAQVLILTHVSARY 255
>sp|P54548|RNZ_BACSU Ribonuclease Z OS=Bacillus subtilis (strain 168) GN=rnz PE=1 SV=1
Length = 307
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 36/251 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLYRMKPP-TIIVPSCIKEDVEQLFEVHRRMDHSELNHT 116
+FI+H H DH+ GLP + +R + T+ P IK +E V + + L +
Sbjct: 59 IFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTK----THLTYP 114
Query: 117 LVGLDVGEEFCMRKDLF-VKAFKTYHVIQSQGYVVY------SVKQKLKQEYLGLPGDEI 169
L ++ E D F V A H +++ GY V S+K + +E PG
Sbjct: 115 LAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVY 174
Query: 170 KKLKSSGTEITYT----------VTTPE----VAFTGDTMSDFIVDEANIDVLRARILVM 215
+K+K G +T + P+ V F+GDT + E D +LV
Sbjct: 175 QKIK-KGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLKELARD---CDVLVH 230
Query: 216 ESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVD---EIRR-AVD 271
E+T+ + + A DY H+ + A++ K ++L H SAR++ D E+++ AVD
Sbjct: 231 EATFAKEDRKL--AYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVD 288
Query: 272 AVPAPLAGRVF 282
P +A F
Sbjct: 289 VFPNSVAAYDF 299
>sp|A7GSG2|RNZ_BACCN Ribonuclease Z OS=Bacillus cereus subsp. cytotoxis (strain NVH
391-98) GN=rnz PE=3 SV=1
Length = 307
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 40/246 (16%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLYRMKPP-TIIVPSCIKEDVEQLFEVHRRMDHSELNHT 116
+FI+H H DHI GLP + +R P T+ P I EQ EV + + + +
Sbjct: 59 IFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGI----EQFIEVALSVSTTHVKYP 114
Query: 117 LVGLDVGEEFCMRKD--LFVKAFKTYHVIQSQGYVVYS-------VKQKLKQEYLGLPGD 167
L +++ EE + +D +V+ + H I+ GY + + +KL++ + PG
Sbjct: 115 LEIVEITEEGIVFEDKQFYVETKRLSHGIECFGYRIVEKDIQGPLLVEKLREANVK-PGP 173
Query: 168 EIKKLKSSGTEITYT-----------VTTPE----VAFTGDTMSDFIVDEANIDVLRARI 212
K+LK EI + P+ + GDT D + I A +
Sbjct: 174 IFKRLKDG--EIVELEDGRVLDGKDFIGPPQKGRIITILGDTR---YCDASRILAQDADV 228
Query: 213 LVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVD---EIRRA 269
LV E+T+ T QA DY H+ + A + K ++L H S+R++ D E+ R
Sbjct: 229 LVHEATFAAADQT--QAHDYFHSTTEQAARIALEANVKRLILTHISSRYQGDMYKELLRE 286
Query: 270 VDAVPA 275
AV A
Sbjct: 287 AKAVFA 292
>sp|A9AB37|RNZ_METM6 Ribonuclease Z OS=Methanococcus maripaludis (strain C6 / ATCC
BAA-1332) GN=rnz PE=3 SV=1
Length = 308
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 43 FDIGRCPSR--------ALSQNFLFISHAHMDHIGGLP---MYVATRGLYRMKPPTIIVP 91
FD G R + N +FISH H DHI GLP VA +G R KP I P
Sbjct: 33 FDCGENTQRQIIFTDVSPMKINNIFISHLHGDHILGLPGLLQSVAFQG--RTKPLNIYGP 90
Query: 92 SCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151
+ +E + V +N + E+ + V +F H + + YV
Sbjct: 91 EETAKMLENILNVGYHSIDYPINVYEISSKTPEKIISTDNYEVYSFPVVHSVPALAYVFR 150
Query: 152 SVKQKL----KQEYLGLP-GDEIKKLKS------SGTEITY-TVTTPE-----VAFTGDT 194
VK+ K LG+ G ++K+LK +G IT VT P V ++GDT
Sbjct: 151 QVKKPRMDLEKVNKLGIEIGPDLKRLKDGFSVELNGKIITLEDVTLPPKKGICVGYSGDT 210
Query: 195 M-----SDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFEN 249
+ ++F+ + L+ L+ E+T+ D T + A++ H+ + + + A+
Sbjct: 211 IPLNEFAEFLRE------LKCTTLIHEATF--DKTMDKNAKETLHSTVHDALNIAKLSGV 262
Query: 250 KAILLIHFSARH 261
++L H SAR+
Sbjct: 263 NTVILTHISARY 274
>sp|Q9PK48|RNZ_CHLMU Ribonuclease Z OS=Chlamydia muridarum (strain MoPn / Nigg) GN=rnz
PE=3 SV=1
Length = 304
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 37/253 (14%)
Query: 58 LFISHAHMDHIGGLPMYVATRGLYRMKPPT-IIVPSCIKEDVEQLFEVHRRMDHSELN-- 114
+FISH H DH GL + L ++ P P+ K+ ++L + + H +
Sbjct: 59 IFISHFHGDHCLGLGSMLMRLNLDKVSHPIHCYYPASGKKYFDRL--RYSTIYHETIKVV 116
Query: 115 -HTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYS------VKQKLKQEYLGLPGD 167
H + + E+F + ++A + H++ + G+ + + +K+K GL G
Sbjct: 117 EHPISSEGIVEDF---GNFRIEARQLDHLVDTLGWRITEPDTTKFISEKIKAA--GLKGP 171
Query: 168 EIKKLKSSGT-----------EITYTVTTPEVAFTGDTM-SDFIVDEANIDVLRARILVM 215
+++L + G +++YT +A D++ IVD A ARIL+
Sbjct: 172 IMQELINKGIIKVNNNIIRLEDVSYTRKGDSIAVVADSLPCQAIVDLAK----NARILLC 227
Query: 216 ESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDE--IRRAVDAV 273
ESTY+++ + A+++ H + E A++ E + ++L HFSAR+ E ++ A +
Sbjct: 228 ESTYLEEHAHL--AKNHYHMTAKQAAEQAKRAEAQQLILTHFSARYNTTEQFVQEAGEIF 285
Query: 274 PAPLAGRVFALTE 286
P A F E
Sbjct: 286 PNVFAAEEFCSYE 298
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,646,548
Number of Sequences: 539616
Number of extensions: 4390874
Number of successful extensions: 12334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 290
Number of HSP's that attempted gapping in prelim test: 12059
Number of HSP's gapped (non-prelim): 372
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)