Query 023022
Match_columns 288
No_of_seqs 169 out of 1830
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 14:59:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwf_A Zinc phosphodiesterase 100.0 2.5E-38 8.5E-43 289.2 20.0 262 20-287 3-352 (368)
2 2e7y_A TRNAse Z; tRNA maturati 100.0 1.2E-35 4.2E-40 260.9 22.0 256 22-288 3-276 (280)
3 2cbn_A Ribonuclease Z; phospho 100.0 6E-35 2.1E-39 260.0 24.1 259 20-288 4-302 (306)
4 1y44_A Ribonuclease Z; zinc-de 100.0 6E-34 2E-38 255.3 22.1 255 20-288 3-300 (320)
5 3md7_A Beta-lactamase-like; ss 100.0 9.1E-30 3.1E-34 225.7 17.3 203 32-288 64-287 (293)
6 1zkp_A Hypothetical protein BA 100.0 4E-29 1.4E-33 218.5 20.6 218 20-288 27-264 (268)
7 3g1p_A Protein PHNP; C-P lyase 100.0 2.8E-29 9.6E-34 218.6 12.9 200 30-287 38-246 (258)
8 3jxp_A Coenzyme PQQ synthesis 99.9 1.8E-28 6.2E-33 219.8 8.0 215 31-287 41-300 (321)
9 3kl7_A Putative metal-dependen 99.9 5.7E-22 1.9E-26 170.1 17.6 170 31-270 37-222 (235)
10 2az4_A Hypothetical protein EF 99.9 1.6E-22 5.4E-27 188.2 15.3 201 20-262 9-265 (429)
11 3iek_A Ribonuclease TTHA0252; 99.9 4.4E-22 1.5E-26 185.3 17.4 221 20-286 3-250 (431)
12 3bk2_A RNAse J, metal dependen 99.9 2.1E-21 7.3E-26 186.2 21.3 214 19-273 18-264 (562)
13 3af5_A Putative uncharacterize 99.9 1.6E-20 5.6E-25 182.9 18.4 211 20-272 191-445 (651)
14 2ycb_A Beta-CAsp RNAse, cleava 99.8 4.9E-21 1.7E-25 186.2 13.5 170 20-223 182-384 (636)
15 3rpc_A Possible metal-dependen 99.8 2E-20 7E-25 163.1 16.0 206 19-287 6-259 (264)
16 2xr1_A Cleavage and polyadenyl 99.8 1.8E-20 6.2E-25 182.2 16.4 223 20-287 186-449 (640)
17 2i7t_A Cleavage and polyadenyl 99.8 8.8E-20 3E-24 171.1 20.2 198 20-264 14-248 (459)
18 2wyl_A L-ascorbate-6-phosphate 99.8 1.8E-19 6.1E-24 164.0 21.6 181 54-287 109-318 (360)
19 3bv6_A Metal-dependent hydrola 99.8 1.8E-19 6.2E-24 165.0 20.5 181 54-287 133-343 (379)
20 3zq4_A Ribonuclease J 1, RNAse 99.8 2.9E-19 1E-23 170.9 20.5 195 28-273 21-248 (555)
21 2i7x_A Protein CFT2; polyadeny 99.8 9.8E-20 3.3E-24 178.6 16.2 173 20-223 3-220 (717)
22 4b87_A DNA cross-LINK repair 1 99.8 3.3E-18 1.1E-22 155.7 17.3 149 37-242 35-183 (367)
23 1vjn_A Zn-dependent hydrolase 99.8 1.9E-18 6.6E-23 146.6 14.4 160 31-275 20-195 (220)
24 3zdk_A 5' exonuclease apollo; 99.8 2.3E-18 7.7E-23 154.9 12.8 183 34-274 5-199 (336)
25 3adr_A Putative uncharacterize 99.6 3.7E-15 1.3E-19 128.8 16.1 170 29-261 18-212 (261)
26 2p4z_A Metal-dependent hydrola 99.6 1.8E-15 6.3E-20 133.1 10.8 208 28-288 30-280 (284)
27 2xf4_A Hydroxyacylglutathione 99.5 1.8E-14 6.2E-19 120.6 10.1 114 31-151 13-142 (210)
28 3m8t_A 'BLR6230 protein; subcl 99.5 7.3E-14 2.5E-18 122.8 12.1 115 31-153 55-189 (294)
29 3l6n_A Metallo-beta-lactamase; 99.5 4E-13 1.4E-17 113.0 13.4 103 31-151 31-149 (219)
30 2zo4_A Metallo-beta-lactamase 99.5 5E-13 1.7E-17 118.8 13.6 173 29-262 20-239 (317)
31 3hnn_A Putative diflavin flavo 99.5 1.4E-13 4.7E-18 119.5 9.4 108 30-150 42-164 (262)
32 4efz_A Metallo-beta-lactamase 99.5 2.2E-13 7.7E-18 120.4 10.7 118 28-153 14-159 (298)
33 2zwr_A Metallo-beta-lactamase 99.5 1.7E-13 6E-18 114.5 9.3 111 30-151 12-135 (207)
34 1xm8_A Glyoxalase II; structur 99.5 2E-13 6.9E-18 118.1 9.8 101 29-151 10-122 (254)
35 2r2d_A AGR_PTI_140P, Zn-depend 99.5 2.3E-13 7.9E-18 118.5 10.1 170 31-258 43-261 (276)
36 4ad9_A Lactb2, beta-lactamase- 99.5 1.7E-12 5.7E-17 114.0 15.7 111 29-151 30-156 (289)
37 1k07_A FEZ-1 beta-lactamase; m 99.4 3.8E-13 1.3E-17 116.5 11.3 118 29-153 23-161 (263)
38 2bib_A CBPE, teichoic acid pho 99.4 7.6E-13 2.6E-17 126.5 13.4 186 29-272 16-272 (547)
39 1a7t_A Metallo-beta-lactamase; 99.4 1.8E-12 6.1E-17 110.2 14.4 103 31-151 37-155 (232)
40 4ax1_B Metallo-beta-lactamase 99.4 1.1E-12 3.9E-17 115.4 13.0 118 29-153 56-194 (303)
41 2p18_A Glyoxalase II; metallop 99.4 1.5E-12 5.1E-17 115.9 13.3 107 28-152 37-166 (311)
42 2gcu_A Putative hydroxyacylglu 99.4 1.1E-13 3.9E-18 119.0 5.7 101 28-152 12-128 (245)
43 1e5d_A Rubredoxin\:oxygen oxid 99.4 4.6E-13 1.6E-17 122.9 10.2 109 28-150 32-155 (402)
44 1m2x_A Class B carbapenemase B 99.4 1.5E-12 5.3E-17 109.9 12.5 103 31-151 27-145 (223)
45 3tp9_A Beta-lactamase and rhod 99.4 1.8E-13 6.2E-18 128.6 7.5 119 15-153 4-135 (474)
46 1qh5_A Glyoxalase II, protein 99.4 5.5E-13 1.9E-17 115.7 9.5 98 29-150 10-119 (260)
47 2qed_A Hydroxyacylglutathione 99.4 9.1E-13 3.1E-17 114.2 10.5 99 28-149 16-125 (258)
48 3r2u_A Metallo-beta-lactamase 99.4 8.4E-13 2.9E-17 123.8 9.9 117 15-152 25-154 (466)
49 1ycg_A Nitric oxide reductase; 99.4 7.1E-13 2.4E-17 121.5 8.8 108 29-150 34-156 (398)
50 3q6v_A Beta-lactamase; metallo 99.4 7.1E-12 2.4E-16 106.1 13.0 173 30-270 25-225 (233)
51 2ohh_A Type A flavoprotein FPR 99.4 2.5E-12 8.5E-17 118.1 10.8 109 30-151 34-161 (404)
52 1sml_A Protein (penicillinase) 99.4 2.2E-12 7.7E-17 112.0 9.8 117 29-152 36-171 (269)
53 1mqo_A Beta-lactamase II; alph 99.4 9.4E-13 3.2E-17 111.5 7.0 103 31-151 41-159 (227)
54 3dha_A N-acyl homoserine lacto 99.3 2.4E-12 8.2E-17 110.8 8.6 99 55-197 101-199 (254)
55 2vw8_A PA1000, PQSE; quinolone 99.3 2E-12 6.9E-17 114.3 8.3 117 30-151 23-171 (303)
56 2fhx_A SPM-1; metallo-beta-lac 99.3 4.2E-11 1.4E-15 102.4 16.2 170 30-267 29-231 (246)
57 4hl2_A Beta-lactamase NDM-1; s 99.3 4E-12 1.4E-16 108.7 7.8 107 31-151 48-172 (243)
58 2q9u_A A-type flavoprotein; fl 99.3 7.1E-12 2.4E-16 115.5 9.4 106 31-150 41-161 (414)
59 1ztc_A Hypothetical protein TM 99.3 4.4E-13 1.5E-17 113.3 1.0 111 29-153 33-164 (221)
60 4dik_A Flavoprotein; TM0755, e 99.3 3E-11 1E-15 111.3 12.6 104 32-150 53-172 (410)
61 3aj3_A MLR6805 protein, 4-pyri 99.2 1.1E-11 3.7E-16 107.8 7.6 168 31-259 35-255 (274)
62 3esh_A Protein similar to meta 99.2 4.6E-12 1.6E-16 110.8 4.9 129 31-197 48-210 (280)
63 3iog_A Beta-lactamase; hydrola 99.2 4.4E-11 1.5E-15 100.8 10.7 113 29-151 21-157 (227)
64 2y8b_A Metallo-B-lactamase; hy 99.2 2.1E-11 7.4E-16 105.8 7.7 106 31-151 68-188 (265)
65 1jjt_A IMP-1 metallo beta-lact 99.2 5.5E-11 1.9E-15 100.8 10.1 103 30-151 32-149 (228)
66 1p9e_A Methyl parathion hydrol 99.2 1.4E-11 4.7E-16 110.6 5.3 127 31-197 97-259 (331)
67 2cfu_A SDSA1; SDS-hydrolase, l 99.1 4.2E-10 1.4E-14 109.6 11.9 120 30-151 122-290 (658)
68 4eyb_A Beta-lactamase NDM-1; m 99.0 5.3E-11 1.8E-15 103.6 0.0 108 31-151 75-199 (270)
69 2p97_A Hypothetical protein; p 99.0 6.4E-10 2.2E-14 92.4 5.7 97 31-151 24-129 (201)
70 2yhe_A SEC-alkyl sulfatase; hy 98.5 9.6E-11 3.3E-15 113.9 0.0 122 29-152 131-302 (668)
71 3h3e_A Uncharacterized protein 98.6 1.9E-07 6.7E-12 80.8 11.4 56 28-94 29-92 (267)
72 3zdk_A 5' exonuclease apollo; 36.2 24 0.00081 30.8 3.2 25 232-256 275-299 (336)
73 4b87_A DNA cross-LINK repair 1 26.4 42 0.0014 29.6 3.2 27 233-259 320-346 (367)
74 2az4_A Hypothetical protein EF 25.9 47 0.0016 29.5 3.5 29 232-260 380-408 (429)
75 2i7t_A Cleavage and polyadenyl 25.6 50 0.0017 29.8 3.6 28 232-259 394-421 (459)
76 3e8x_A Putative NAD-dependent 25.3 2.1E+02 0.007 22.5 7.1 62 188-255 68-129 (236)
77 3lg3_A Isocitrate lyase; conse 23.4 62 0.0021 29.3 3.6 63 206-283 280-351 (435)
No 1
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=289.22 Aligned_cols=262 Identities=25% Similarity=0.336 Sum_probs=166.8
Q ss_pred eEEEEeeec-----CceeEEEeC--CceEEEeCCCCCccc--------cCcCEEEEecCChhhhCcHHHHHHHhCCCC--
Q 023022 20 YKVEGLSIA-----GHETCIIFP--SLDLAFDIGRCPSRA--------LSQNFLFISHAHMDHIGGLPMYVATRGLYR-- 82 (288)
Q Consensus 20 ~~v~g~~~~-----~~~s~~~i~--~~~iLiD~G~~~~~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~-- 82 (288)
++|+|.+.+ .+.+|+++. +..+|||||.+.+.+ .+|++|||||.|.||++|++.|+..+...+
T Consensus 3 l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~ 82 (368)
T 3zwf_A 3 VTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGS 82 (368)
T ss_dssp EEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC--
T ss_pred EEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhcccc
Confidence 677775432 346788775 569999999987532 269999999999999999999987643221
Q ss_pred ---CCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCC---------------------------CCeEEe----
Q 023022 83 ---MKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDV---------------------------GEEFCM---- 128 (288)
Q Consensus 83 ---~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~---------------------------g~~~~i---- 128 (288)
..++.||+|+.+.+.+...+..... ....++.++.+.+ |+.+.+
T Consensus 83 ~~~~~~l~iygp~~~~~~l~~~l~~~~~--~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 160 (368)
T 3zwf_A 83 MVSKQPIEIYGPVGLRDFIWRTMELSHT--ELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEE 160 (368)
T ss_dssp ----CCEEEEEETTHHHHHHHHHHHTTC--CCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTT
T ss_pred ccCCCCeEEEEcHHHHHHHHHHHHhhCc--CCCceEEEEEeecCccccccccccccccccccccCccccccccccccccc
Confidence 3588999999999998876654321 1123345555533 333322
Q ss_pred -------cCCeEEEEEEcCCcCCcceEEEEEecc--cc---chhhcCCC-hHHHHHHHhcCceecc--------------
Q 023022 129 -------RKDLFVKAFKTYHVIQSQGYVVYSVKQ--KL---KQEYLGLP-GDEIKKLKSSGTEITY-------------- 181 (288)
Q Consensus 129 -------~~~~~i~~~~~~H~~~~~g~~i~~~~~--~~---~~~~~g~~-~~~l~~l~~~G~~i~~-------------- 181 (288)
.++++|+++++.|+++|+||+|.+.++ ++ |.+.+|+| ||++++||+ |..++.
T Consensus 161 ~~~~~~~~~~~~V~a~~~~H~vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~-G~~v~~~dG~~i~~~~v~~~ 239 (368)
T 3zwf_A 161 NSYLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKN-GISVVLENGVTISPQDVLKK 239 (368)
T ss_dssp TBEEEEECSSEEEEEEEEESSSCEEEEEEEECC-----------------------------------------------
T ss_pred CceeEEeCCCEEEEEEeccCCCceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCC-CCeEEecCCEEEEhHHhccc
Confidence 158999999999999999999998765 34 55689997 899999996 766652
Q ss_pred eEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCCC
Q 023022 182 TVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARH 261 (288)
Q Consensus 182 ~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~~ 261 (288)
+..+.+++|+|||++. ........++++|+||+||||.+.+ ...+..+.|+++++|.+++++.++++++++||++||
T Consensus 240 ~~~g~~v~~~GDT~~~-~~~~~~~~~~~~Dlli~Eat~~~~~--~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry 316 (368)
T 3zwf_A 240 PIVGRKICILGDCSGV-VGDGGVKLCFEADLLIHEATLDDAQ--MDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRY 316 (368)
T ss_dssp --CCCEEEEECSCSEE-CSSHHHHHTTTCSEEEEECCSCGGG--HHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC
T ss_pred cccceEEEEEecCCcc-cchhHHHHhcCCCEEEEecCCChHH--HhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCccc
Confidence 1237789999999871 1223345678999999999999876 567788999999999999999999999999999999
Q ss_pred Chh---------HHHHHHHhCCCcccc-eeeecccC
Q 023022 262 KVD---------EIRRAVDAVPAPLAG-RVFALTEG 287 (288)
Q Consensus 262 ~~~---------~~~~~~~~~~~~~~~-~~~~~~~g 287 (288)
+.+ .+.+++++......+ .+.+|.||
T Consensus 317 ~~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~a~dg 352 (368)
T 3zwf_A 317 KPVALAREGETDGIAELKKQAESVLDLQEVTLAEDF 352 (368)
T ss_dssp ---------------------------CEEEECCTT
T ss_pred CccccccccccchHHHHHHHHHHhcCCCceEEecCC
Confidence 832 233444444444433 67788887
No 2
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=100.00 E-value=1.2e-35 Score=260.89 Aligned_cols=256 Identities=26% Similarity=0.439 Sum_probs=188.5
Q ss_pred EEEeeecCceeEEEeCCceEEEeCCCCCcc-----ccCcCEEEEecCChhhhCcHHHHHHHhC--CC-CCCCCEEeCCcc
Q 023022 22 VEGLSIAGHETCIIFPSLDLAFDIGRCPSR-----ALSQNFLFISHAHMDHIGGLPMYVATRG--LY-RMKPPTIIVPSC 93 (288)
Q Consensus 22 v~g~~~~~~~s~~~i~~~~iLiD~G~~~~~-----~~~i~~I~iTH~H~DH~~gl~~ll~~~~--~~-~~~~~~i~~p~~ 93 (288)
|..++.|++++|+.+.+..+|||||.+... ..++++|||||.|.||++|++.|+..+. +. +..+++||+|+.
T Consensus 3 i~~~~~g~~~~~~~i~~~~iLiD~G~~~~~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~ 82 (280)
T 2e7y_A 3 IIGFSKALFSTWIYYSPERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEG 82 (280)
T ss_dssp EEEEEETTTEEEEEEGGGTEEEEECTTHHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETT
T ss_pred EEEEecCCceEEEEECCcEEEEECCcchHHHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECcc
Confidence 344567888999999777999999988642 2469999999999999999999974321 11 245689999998
Q ss_pred hHHHHHHHHHhhhhcC-CCCCceEEEEcCCCCeEEecC----CeEEEEEEcCCcCC--cceEEEEEeccccchhhcCCCh
Q 023022 94 IKEDVEQLFEVHRRMD-HSELNHTLVGLDVGEEFCMRK----DLFVKAFKTYHVIQ--SQGYVVYSVKQKLKQEYLGLPG 166 (288)
Q Consensus 94 ~~~~l~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~i~~----~~~i~~~~~~H~~~--~~g~~i~~~~~~~~~~~~g~~~ 166 (288)
.. .+...+....... ......+++.+++|+++.+++ +++|++++++|+++ ++||++...+++++++..|+|+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~~~~g~~~ 161 (280)
T 2e7y_A 83 NR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQGLDS 161 (280)
T ss_dssp CH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGGTTCCH
T ss_pred HH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCHhhcCCCH
Confidence 87 6665443322111 011234678899999999964 89999999999999 9999999888899999999999
Q ss_pred HHHHHHH-hcCce-ecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHH
Q 023022 167 DEIKKLK-SSGTE-ITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYA 244 (288)
Q Consensus 167 ~~l~~l~-~~G~~-i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~ 244 (288)
+++.+|+ ..|.+ ++....+++++|+||+++. ....++++|+||+||||.+... .....|++++++++++
T Consensus 162 ~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~-----~~~~~~~~d~li~e~t~~~~~~----~~~~~H~t~~~a~~~~ 232 (280)
T 2e7y_A 162 KEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL-----DPEEIRGTELLIHECTFLDARD----RRYKNHAAIDEVMESV 232 (280)
T ss_dssp HHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC-----CHHHHTTCSCEEEECCBC------------CCCBHHHHHHHH
T ss_pred HHHHHHHhhcCCceecCCccCCEEEEECCCChH-----HHHhhcCCCEEEEeCCcCChhh----HHhcCCCCHHHHHHHH
Confidence 9999998 23532 3333345689999999985 1234679999999999987641 1267899999999999
Q ss_pred HHcCCCeEEEEeccCCCChhHHHHHHHhCCCccc-ceeeecccCC
Q 023022 245 EKFENKAILLIHFSARHKVDEIRRAVDAVPAPLA-GRVFALTEGF 288 (288)
Q Consensus 245 ~~~~~~~~~l~H~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~ 288 (288)
++.++++++++||+++|+. ++.++.++...... ..|.++.+|.
T Consensus 233 ~~~~~~~lvl~H~~~~~~~-~~~~~~~~~~~~~~~~~v~~a~~G~ 276 (280)
T 2e7y_A 233 KAAGVKKVILYHISTRYIR-QLKSVIKKYREEMPDVEILYMDPRK 276 (280)
T ss_dssp HHHTCCEEEEESCCGGGHH-HHHHHHHHHHHHCTTSEEEECCTTS
T ss_pred HHcCCCEEEEEeecCcCcc-hHHHHHHHHHHhCCCceEEEeCCCc
Confidence 9999999999999999864 23322222222222 3788888873
No 3
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=100.00 E-value=6e-35 Score=260.03 Aligned_cols=259 Identities=23% Similarity=0.246 Sum_probs=193.2
Q ss_pred eEEEEeeec-----CceeEEEeC------CceEEEeCCCCCccc--------cCcCEEEEecCChhhhCcHHHHHHHhCC
Q 023022 20 YKVEGLSIA-----GHETCIIFP------SLDLAFDIGRCPSRA--------LSQNFLFISHAHMDHIGGLPMYVATRGL 80 (288)
Q Consensus 20 ~~v~g~~~~-----~~~s~~~i~------~~~iLiD~G~~~~~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~ 80 (288)
++++|.+.+ .+++|+++. +..+|||||.+..++ .++++|||||.|.||++|++.++..+.+
T Consensus 4 i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~ 83 (306)
T 2cbn_A 4 LIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSM 83 (306)
T ss_dssp EEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHh
Confidence 667776543 246777774 358999999986421 3589999999999999999999875432
Q ss_pred C-CCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEeccc--c
Q 023022 81 Y-RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQK--L 157 (288)
Q Consensus 81 ~-~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~~--~ 157 (288)
. +..+++||+|+...+.++..+..... ......+++.+++++.+.++ +++|+++++.|+.+++||++...+++ +
T Consensus 84 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~-~~~v~~~~~~H~~~~~gy~i~~~~~~~~~ 160 (306)
T 2cbn_A 84 SGIIQPLTIYGPQGIREFVETALRISGS--WTDYPLEIVEIGAGEILDDG-LRKVTAYPLEHPLECYGYRIEEHDAPGAL 160 (306)
T ss_dssp TTCCSCEEEEESTTHHHHHHHHHHHTTC--CCSSCEEEEECCSEEEEECS-SEEEEEEECBSSSCCEEEEEEECCCCCCB
T ss_pred cCCCCCeEEEcCccHHHHHHHHHHhhcc--CCCceEEEEEcCCCcEeecC-CEEEEEEEccCCCCccEEEEEecCccCcc
Confidence 2 23578999999998888765543211 11233578889999999985 99999999999999999999875442 3
Q ss_pred ---chhhcCCC-hHHHHHHHhcCceecc--------------eEeCCeEEEecCCCCCccccccccccCCCCEEEEeccc
Q 023022 158 ---KQEYLGLP-GDEIKKLKSSGTEITY--------------TVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTY 219 (288)
Q Consensus 158 ---~~~~~g~~-~~~l~~l~~~G~~i~~--------------~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~ 219 (288)
+...+|+| +|++.+|+. |..++- ...+++++|+||+++.. ......+++|+||+||||
T Consensus 161 ~~~~~~~~gv~~~~~~~~l~~-g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~---~~~~~~~~~D~li~E~t~ 236 (306)
T 2cbn_A 161 NAQALKAAGVPPGPLFQELKA-GKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCD---AALDLAKGVDVMVHEATL 236 (306)
T ss_dssp CHHHHHHTTCCSSHHHHHHHH-TCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCS---THHHHHTTCSEEEEECCB
T ss_pred CHHHHHHcCCCCchHHHHhcC-CCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHH---HHHHHhcCCCEEEEECcC
Confidence 45678998 899999986 543321 12457899999999842 223456799999999999
Q ss_pred CCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCCCChhHHHHHHHhCCCcccceeeecccCC
Q 023022 220 VDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEIRRAVDAVPAPLAGRVFALTEGF 288 (288)
Q Consensus 220 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 288 (288)
.+.. .+.+...+|++++++++++++.++++++++||+++|+..++.++.++..+.. ..|.+|.||.
T Consensus 237 ~~~~--~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~-~~~~~a~Dg~ 302 (306)
T 2cbn_A 237 DITM--EAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIF-PATELANDFT 302 (306)
T ss_dssp CGGG--HHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTC-SCEEECCTTC
T ss_pred Chhh--HhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhC-CCcEEccccc
Confidence 8765 4556789999999999999999999999999999998654433332222222 2488999884
No 4
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=100.00 E-value=6e-34 Score=255.34 Aligned_cols=255 Identities=24% Similarity=0.329 Sum_probs=175.0
Q ss_pred eEEEEeeec-----CceeEEEeC-----CceEEEeCCCCCccc--------cCcCEEEEecCChhhhCcHHHHHHHhCCC
Q 023022 20 YKVEGLSIA-----GHETCIIFP-----SLDLAFDIGRCPSRA--------LSQNFLFISHAHMDHIGGLPMYVATRGLY 81 (288)
Q Consensus 20 ~~v~g~~~~-----~~~s~~~i~-----~~~iLiD~G~~~~~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~ 81 (288)
++|+|.+.+ .+++|+++. +..+|||||.+..++ .+|++|||||.|+||++|++.++..+.+.
T Consensus 3 i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~ 82 (320)
T 1y44_A 3 LLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQ 82 (320)
T ss_dssp EEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHT
T ss_pred EEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhc
Confidence 667776543 346778774 358999999876421 25899999999999999999998754322
Q ss_pred -CCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEecc--cc-
Q 023022 82 -RMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQ--KL- 157 (288)
Q Consensus 82 -~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~--~~- 157 (288)
+..+++||+|+...+.++..+..... ......+++.+++|+.+.++ +++|+++|+.|+.+++||++...++ ++
T Consensus 83 ~~~~~~~v~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~-~~~v~~~p~~H~~~~~gy~i~~~~~~~~~~ 159 (320)
T 1y44_A 83 GGEDELTVYGPKGIKAFIETSLAVTKT--HLTYPLAIQEIEEGIVFEDD-QFIVTAVSVIHGVEAFGYRVQEKDVPGSLK 159 (320)
T ss_dssp TCCSCEEEEESTTHHHHHHHHHHHTTC--CCSSCEEEEECCSEEEEECS-SEEEEEEECBSSSSBEEEEEEECCBCCCC-
T ss_pred CCCCCEEEEeCHHHHHHHHHHHHhhcc--CCCCceEEEEcCCCceEecC-CEEEEEEEccCCCCcceEEEecCCCcCccC
Confidence 23578999999998888765543211 11223577889999999985 8999999999999999999986543 23
Q ss_pred --chhhcCCC-hHHHHHHHhcCceecc--------------eEeCCeEEEecCCCCCccccccccccCCCCEEEEecccC
Q 023022 158 --KQEYLGLP-GDEIKKLKSSGTEITY--------------TVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYV 220 (288)
Q Consensus 158 --~~~~~g~~-~~~l~~l~~~G~~i~~--------------~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~ 220 (288)
+...+|+| +|++.+|++ |..++- ...+++++|+||+++.. ......+++|+||+||||.
T Consensus 160 ~~~~~~~g~~~g~~~~~l~~-g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~---~~~~~~~~~D~li~E~t~~ 235 (320)
T 1y44_A 160 ADVLKEMNIPPGPVYQKIKK-GETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSD---KLKELARDCDVMVHEATFA 235 (320)
T ss_dssp --------------------------------------CCCCBCCCEEEECCSCBCCH---HHHHHTTTCSEEEEECCBC
T ss_pred HHHHHHcCCCCchhHHHhhC-CCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHH---HHHHHhCCCCEEEEeccCC
Confidence 44578887 799999985 544331 12357899999999852 2234567999999999999
Q ss_pred CCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCCCChhHH---HH-HHHhCCCcccceeeecccCC
Q 023022 221 DDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHKVDEI---RR-AVDAVPAPLAGRVFALTEGF 288 (288)
Q Consensus 221 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~g~ 288 (288)
+.. .+.+...+|++++++++++++.++++++++||+++|+..++ .+ +.+.++ .+.++.||.
T Consensus 236 ~~~--~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~~-----~~~~a~dg~ 300 (320)
T 1y44_A 236 KED--RKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP-----NSVAAYDFL 300 (320)
T ss_dssp TTC--HHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCS-----SEEECCTTC
T ss_pred cch--HhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhCC-----CcEeccCCC
Confidence 876 45567899999999999999999999999999999986433 22 233332 477888873
No 5
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.97 E-value=9.1e-30 Score=225.71 Aligned_cols=203 Identities=15% Similarity=0.175 Sum_probs=155.6
Q ss_pred eEEEeC----C---ceEEEeCCCCCccc------cCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHH
Q 023022 32 TCIIFP----S---LDLAFDIGRCPSRA------LSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDV 98 (288)
Q Consensus 32 s~~~i~----~---~~iLiD~G~~~~~~------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l 98 (288)
+|++++ + ..+|||||++.+.+ .+|++|||||.|.||++|++.|..... ....+++||+++...+.+
T Consensus 64 ~s~li~~~~~~g~~~~iLID~G~~~~~~l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~-~~~~~~~vy~~~~~~~~l 142 (293)
T 3md7_A 64 ASLLVERYDAEGNNTVVVIDTGPDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVV-DNGRLMDVYANRLTRNRL 142 (293)
T ss_dssp CEEEEEEECTTCCEEEEEECCCTTHHHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHH-HHTSCEEEEECHHHHHHH
T ss_pred cEEEEEecCCCCceeEEEEECCccHHHHHHhcCCCcccEEEEcCCCchhhCCHHHHHHHhh-cCCCceEEEECHHHHHHH
Confidence 677775 4 49999999987543 369999999999999999998865321 124578999999988888
Q ss_pred HHHHHhhhhcC-CCC--CceEEEEcCCCCeEEecCC----eEEEEEEcCCc-CCcceEEEEEeccccchhhcCCChHHHH
Q 023022 99 EQLFEVHRRMD-HSE--LNHTLVGLDVGEEFCMRKD----LFVKAFKTYHV-IQSQGYVVYSVKQKLKQEYLGLPGDEIK 170 (288)
Q Consensus 99 ~~~~~~~~~~~-~~~--~~~~~~~l~~g~~~~i~~~----~~i~~~~~~H~-~~~~g~~i~~~~~~~~~~~~g~~~~~l~ 170 (288)
...+....... ... ...+++.+++|+++.++ + ++|+++++.|. .+++||++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~g-~~~~~~~v~~~~~~H~~~~~~g~~i~------------------- 202 (293)
T 3md7_A 143 YDTFGYCFETPVGSSYPPILSMHDIAPETPFSIE-GAGGAIRFEPFSQVHGDIESLGFRIG------------------- 202 (293)
T ss_dssp HHHCGGGTSCCTTCCCCCCEEEEECCTTCCEEEC-CTTCCEEEEEEEEEETTEEEEEEEET-------------------
T ss_pred HHhhhhhhccccccCCCCceEEEEcCCCCcEEEC-CCCCcEEEEEEEecCCCCCEEEEEEe-------------------
Confidence 76554332110 011 12478889999999995 7 99999999998 699999993
Q ss_pred HHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCC
Q 023022 171 KLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENK 250 (288)
Q Consensus 171 ~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 250 (288)
+++|+||+... .+.....++++|+||+||++... ...|++++++++++++++++
T Consensus 203 ----------------~~~y~gDt~~~--~~~~~~~~~~~Dlli~e~~~~~~--------~~~H~~~~~a~~~~~~~~~k 256 (293)
T 3md7_A 203 ----------------SVVYCTDVSAF--PEQSLQYIKDADVLIIGALQYRP--------HPSHFSLGEALEWIEKLSPK 256 (293)
T ss_dssp ----------------TEEEECSCSBC--CGGGHHHHTTCSEEEEECCCSSC--------BTTBCCHHHHHHHHHHHCCS
T ss_pred ----------------EEEEECCCCCC--CHHHHHHhcCCCEEEEeCccCCC--------CCCCCCHHHHHHHHHHcCCC
Confidence 49999999841 12334567899999999987654 36799999999999999999
Q ss_pred eEEEEeccCCCChhHHHHHHHhCCCcccceeeecccCC
Q 023022 251 AILLIHFSARHKVDEIRRAVDAVPAPLAGRVFALTEGF 288 (288)
Q Consensus 251 ~~~l~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 288 (288)
+++++|++++++.+++. +.+ ...|.+|.||.
T Consensus 257 ~lvl~H~~~~~~~~~~~---~~~----~~~v~~a~DG~ 287 (293)
T 3md7_A 257 RAILTHMHVPLDYETVM---RET----PHHVEPGYDGL 287 (293)
T ss_dssp EEEEESBCTTCCHHHHH---HHS----CTTEEECCTTC
T ss_pred EEEEECCCCCCCHHHHH---hhc----CCCcEEeeCCc
Confidence 99999999999865432 333 34688888883
No 6
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.97 E-value=4e-29 Score=218.50 Aligned_cols=218 Identities=16% Similarity=0.182 Sum_probs=164.3
Q ss_pred eEEEEeee-----cCceeEEEeC--CceEEEeCCCCCcc-------ccCcCEEEEecCChhhhCcHHHHHHHhCC-----
Q 023022 20 YKVEGLSI-----AGHETCIIFP--SLDLAFDIGRCPSR-------ALSQNFLFISHAHMDHIGGLPMYVATRGL----- 80 (288)
Q Consensus 20 ~~v~g~~~-----~~~~s~~~i~--~~~iLiD~G~~~~~-------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~----- 80 (288)
++++|.+. +++++|++++ +..+|||||.+... ..+|++|||||.|.||++|++.+...+.+
T Consensus 27 i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~~~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~ 106 (268)
T 1zkp_A 27 MTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATK 106 (268)
T ss_dssp EEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHHHHHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHHhccccc
Confidence 55555432 2357788875 56999999987532 23589999999999999999998764221
Q ss_pred CCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEeccccchh
Q 023022 81 YRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQE 160 (288)
Q Consensus 81 ~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~~~~~~ 160 (288)
....+++||+|+...+.+.... + .....+..+++++++.++ +++|+++++.|++++++|++..+
T Consensus 107 ~~~~~~~i~~~~~~~~~l~~~~-----~---~~~~~~~~~~~g~~~~~g-~~~v~~~~~~H~~~~~~~~i~~~------- 170 (268)
T 1zkp_A 107 GQLPELPIYGHTFDENGFHSLT-----H---EPHTKGIPYNPEETLQIG-PFSISFLKTVHPVTCFAMRITAG------- 170 (268)
T ss_dssp CCCCCEEEEECSSSHHHHHTTC-----B---TTTEEEEECCTTSCEEET-TEEEEEEECCSSSCCEEEEEEET-------
T ss_pred CCCCceEEEeCccHHHHHHhcc-----c---CCccceEEecCCCeEEEC-CEEEEEEECCCCCCceEEEEEEC-------
Confidence 1234678999998877664321 1 112357788999999995 99999999999999999999754
Q ss_pred hcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHH
Q 023022 161 YLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEI 240 (288)
Q Consensus 161 ~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~ 240 (288)
| .+++|+||+.+.. ......+++|++++||+|.+... ....+|++++++
T Consensus 171 ---------------~---------~~i~~~GD~~~~~---~~~~~~~~~d~li~e~~~~~~~~----~~~~~H~~~~~a 219 (268)
T 1zkp_A 171 ---------------N---------DIVVYSADSSYIP---EFIPFTKDADLFICECNMYAHQE----AAKAGHMNSTEV 219 (268)
T ss_dssp ---------------T---------EEEEECCSCCCCT---THHHHHTTCSEEEEECCBCTTSC----CGGGTCCBHHHH
T ss_pred ---------------C---------eEEEEeCCCCCCH---HHHHHHcCCCEEEEECCCCcccc----ccCCCCCCHHHH
Confidence 2 4799999999732 22234578999999999987542 135679999999
Q ss_pred HHHHHHcCCCeEEEEeccCCCChhHHHHHH-HhCCCcccceeeecccCC
Q 023022 241 VEYAEKFENKAILLIHFSARHKVDEIRRAV-DAVPAPLAGRVFALTEGF 288 (288)
Q Consensus 241 ~~~~~~~~~~~~~l~H~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 288 (288)
.+++++.++++++++|++++++.+++.... +.++ .+|.++.||.
T Consensus 220 ~~~~~~~~~~~lil~H~~~~~~~~~~~~~~~~~~~----~~v~~a~dg~ 264 (268)
T 1zkp_A 220 ASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFS----GHITLAHSGY 264 (268)
T ss_dssp HHHHHHTTCSEEEEESBCSSSCTHHHHHHHHTTCC----SEEEECCTTC
T ss_pred HHHHHHcCCCEEEEECCCCCCChHHHHHHHHHhCC----CCEEEEeCCc
Confidence 999999999999999999999877665443 3343 3689999984
No 7
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.96 E-value=2.8e-29 Score=218.55 Aligned_cols=200 Identities=17% Similarity=0.184 Sum_probs=148.6
Q ss_pred ceeEEEeC--CceEEEeCCCCCc-c---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHH
Q 023022 30 HETCIIFP--SLDLAFDIGRCPS-R---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFE 103 (288)
Q Consensus 30 ~~s~~~i~--~~~iLiD~G~~~~-~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~ 103 (288)
+++|++++ +..+|||||.... . ..+|++|||||.|.||++|++.+.. ....+++||+++.... +...
T Consensus 38 ~~s~~li~~~~~~iLiD~G~~~~~~~~~~~~id~IliTH~H~DHi~gl~~l~~----~~~~~~~v~~~~~~~~-~~~~-- 110 (258)
T 3g1p_A 38 QPCSGVVKFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRW----GVGDPIPVYGPPDEQG-CDDL-- 110 (258)
T ss_dssp CBSEEEEEETTEEEEECCCCTTHHHHCCTTSSCEEECSCCCHHHHGGGTTTTT----CSSSCEEEEECCCSSC-STTT--
T ss_pred cCceEEEEECCcEEEEECCchHHHhhcCcccCCEEEEccCchhHhCCHHHHhc----cCCCCeEEEeChhhhh-HHHH--
Confidence 46777775 5699999995432 2 2369999999999999999977632 2234688999987651 1111
Q ss_pred hhhhcCCCCCceEE-EEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecce
Q 023022 104 VHRRMDHSELNHTL-VGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYT 182 (288)
Q Consensus 104 ~~~~~~~~~~~~~~-~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~ 182 (288)
+..... ..+ ..+.+|+++.++ +++|+++++.|+.+++||+++.+ |
T Consensus 111 ----~~~~~~-~~~~~~~~~g~~~~~g-~~~v~~~~~~H~~~~~g~~i~~~----------------------~------ 156 (258)
T 3g1p_A 111 ----FKHPGL-LDFSHTVEPFVVFDLQ-GLQVTPLPLNHSKLTFGYLLETA----------------------H------ 156 (258)
T ss_dssp ----TTSCTT-EEEEEECCTTCCEEET-TEEEEEEECCSSSCCEEEEEECS----------------------S------
T ss_pred ----hcCCCc-cccccccCCCCeEEEC-CEEEEEEECCCCCCceEEEEEeC----------------------C------
Confidence 111111 233 588999999995 99999999999999999999754 2
Q ss_pred EeCCeEEEecCCCCCcccccccccc--CCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCC
Q 023022 183 VTTPEVAFTGDTMSDFIVDEANIDV--LRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSAR 260 (288)
Q Consensus 183 ~~~~~i~y~gD~~~~~~~~~~~~~~--~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~ 260 (288)
++++|+||+.+.. +.....+ +++|+||+||+|.+... ....|++++++.+++++.++++++++|++++
T Consensus 157 ---~~i~~~GDt~~~~--~~~~~~l~~~~~Dlli~e~t~~~~~~-----~~~~H~~~~~a~~~~~~~~~k~lil~H~s~~ 226 (258)
T 3g1p_A 157 ---SRVAWLSDTAGLP--EKTLKFLRNNQPQVMVMDCSHPPRAD-----APRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 (258)
T ss_dssp ---CEEEEECSCSSCC--HHHHHHHHHTCCSEEEEECCBSSCSS-----CCSSSCBHHHHHHHHHHHCCSCEEEESCCHH
T ss_pred ---cEEEEECCCCCCC--HHHHHHHHhCCCCEEEEeCCCCCccc-----cCCCCCCHHHHHHHHHHcCCCEEEEECccCc
Confidence 5799999999731 1112233 68999999999987641 3578999999999999999999999999998
Q ss_pred CChhHHHHHHHhCCCcccceeeecccC
Q 023022 261 HKVDEIRRAVDAVPAPLAGRVFALTEG 287 (288)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~g 287 (288)
++.+.+ .......|.+|.||
T Consensus 227 ~~~~~~-------~~~~~~~v~~a~Dg 246 (258)
T 3g1p_A 227 FDAWLM-------ENALPSGFEVGFDG 246 (258)
T ss_dssp HHHHHT-------TCCCCTTEEECCTT
T ss_pred cchhhh-------hhhCCCCeEEccCC
Confidence 764321 22445678888888
No 8
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.95 E-value=1.8e-28 Score=219.85 Aligned_cols=215 Identities=14% Similarity=0.214 Sum_probs=151.2
Q ss_pred eeEEEeC--Cce-EEEeCCCCCcc---------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCc
Q 023022 31 ETCIIFP--SLD-LAFDIGRCPSR---------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPS 92 (288)
Q Consensus 31 ~s~~~i~--~~~-iLiD~G~~~~~---------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~ 92 (288)
.+|++++ +.. +|||||++... ..+|++|||||.|.||++|++.|.. ..+++||+++
T Consensus 41 ~ss~li~~~~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~------~~~~~vy~~~ 114 (321)
T 3jxp_A 41 QSSIALSDDGVHWILCNASPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLRE------GCPHQVWCTD 114 (321)
T ss_dssp BCEEEEESSSSSEEEECCCTTHHHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGG------GCCEEEEECH
T ss_pred ceEEEEEeCCceEEEEeCCchHHHHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHh------cCCCeEEECH
Confidence 5788876 344 99999997632 1258999999999999999998842 3468899999
Q ss_pred chHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEe---cCCeEEEEEEcC--------Cc-----CCcceEEEEEeccc
Q 023022 93 CIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCM---RKDLFVKAFKTY--------HV-----IQSQGYVVYSVKQK 156 (288)
Q Consensus 93 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i---~~~~~i~~~~~~--------H~-----~~~~g~~i~~~~~~ 156 (288)
.+.+.+...+............++++.+++++++.+ + +++|+++++. |+ .+++||+|+.+.
T Consensus 115 ~~~~~l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~-~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~-- 191 (321)
T 3jxp_A 115 MVHQDLTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACP-NLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTR-- 191 (321)
T ss_dssp HHHHHTTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTST-TEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETT--
T ss_pred HHHHHHHhhCccccccccccCceeEEEcCCCCeEEeccCC-CeEEEEEEecCCccccccccccccCCCcEEEEEEecC--
Confidence 887776632211010011111257889999999999 6 9999999997 66 489999997311
Q ss_pred cchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcH------HHHh
Q 023022 157 LKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTV------EQAR 230 (288)
Q Consensus 157 ~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~------~~~~ 230 (288)
.| ++++|+||+++. .+.....++++|+||+||||.....-. +.+.
T Consensus 192 ------------------~g---------~~i~y~~Dt~~~--~~~~~~~~~~~D~li~eat~~~d~e~~~~glk~r~~~ 242 (321)
T 3jxp_A 192 ------------------TG---------GKLFYAPGLGQV--DEKLLAMMHGADCLLVDGTLWEDDEMQRRGVGTRTGR 242 (321)
T ss_dssp ------------------TC---------CEEEEESSCCCC--CHHHHHHHHHCSEEEEECCCSSTTHHHHHTSCSCCCC
T ss_pred ------------------CC---------cEEEEECCCCCC--CHHHHHHhcCCCEEEEeCCCCCcHHHhhccccccccC
Confidence 13 589999999862 223345667899999999987643100 1123
Q ss_pred hcCCCcHH---HHHHHHHHcCCCeEEEEeccCCCChhH--HHHHHHhCCCcccceeeecccC
Q 023022 231 DYGHTHLS---EIVEYAEKFENKAILLIHFSARHKVDE--IRRAVDAVPAPLAGRVFALTEG 287 (288)
Q Consensus 231 ~~~H~~~~---~~~~~~~~~~~~~~~l~H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g 287 (288)
.++|++.+ +++++++++++|+++|+|+|++++.-. ..+..+.+ ...|.+|.||
T Consensus 243 ~~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~np~l~~~~~e~~~~~----~~~v~~A~DG 300 (321)
T 3jxp_A 243 EMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVL----RRGVEVAFDG 300 (321)
T ss_dssp -CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTCGGGSTTCHHHHHHH----HTTEEECCTT
T ss_pred CCcccCCCCHHHHHHHHHhCCCCeEEEEEeCCCCcccccchHHHHHhh----cCCcEEecCC
Confidence 56899999 999999999999999999999875221 11222222 2356777776
No 9
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.89 E-value=5.7e-22 Score=170.14 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=130.6
Q ss_pred eeEEEeC--CceEEEeCCCCCcc---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhh
Q 023022 31 ETCIIFP--SLDLAFDIGRCPSR---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVH 105 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~ 105 (288)
.+|++++ +.++|||||..... ..++|+||+||.|.||+ |+..+... ....+++|+++...+.+.
T Consensus 37 ~s~~li~~~~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~-~~~~l~~~----~~~~~~v~~~~~~~~~l~------ 105 (235)
T 3kl7_A 37 HGSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHEHGDHL-DPKAIQAV----EKSDTEIIANENSQKKLG------ 105 (235)
T ss_dssp TTEEEEEETTEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTC-CHHHHHHH----CCTTCEEEECHHHHHHHT------
T ss_pred ceEEEEEECCEEEEECCCCCccchhhCCCCCEEEECCCccccC-CHHHHHHh----hcCCCEEEEcHHHHHHhc------
Confidence 4577765 56999999986532 23799999999999999 77766542 134678999987765542
Q ss_pred hhcCCCCCceEEEEcCCCC-eEEecCCeEEEEEEcCCcCC----------cceEEEEEeccccchhhcCCChHHHHHHHh
Q 023022 106 RRMDHSELNHTLVGLDVGE-EFCMRKDLFVKAFKTYHVIQ----------SQGYVVYSVKQKLKQEYLGLPGDEIKKLKS 174 (288)
Q Consensus 106 ~~~~~~~~~~~~~~l~~g~-~~~i~~~~~i~~~~~~H~~~----------~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~ 174 (288)
+...+++|+ ++.++ +++|+++|+.|+.+ +.||++..+
T Consensus 106 ----------~~~~l~~g~~~~~~g-~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~--------------------- 153 (235)
T 3kl7_A 106 ----------KGKVLKNGDTDTSIS-YMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFD--------------------- 153 (235)
T ss_dssp ----------CSEECCTTCEECCST-TCEEEEEECCCCSTTGGGTSCTTTSEEEEEEET---------------------
T ss_pred ----------CcEEecCCCEEEEEC-CEEEEEEEeecCCCccccccCCCCceEEEEEeC---------------------
Confidence 135788899 89995 99999999999763 589999763
Q ss_pred cCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEE
Q 023022 175 SGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILL 254 (288)
Q Consensus 175 ~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l 254 (288)
| .+++|+||+.+..- .....++|++++|+.. ..|++++++.+++++.+++++++
T Consensus 154 -g---------~~i~~~GDt~~~~~----~~~l~~~Dv~il~~~~------------~~h~~~~ea~~~~~~l~~k~vip 207 (235)
T 3kl7_A 154 -G---------LRVYIAGDTEDIPE----MKDLKDIDIAFLPVNQ------------PYTMTVSQAAKAARMFSPKILYP 207 (235)
T ss_dssp -T---------EEEEECCSCCSCGG----GGGCCSCSEEEEECCT------------TTSCCHHHHHHHHHHHCCSEEEE
T ss_pred -C---------eEEEEECCCCchhh----HHhhcCCCEEEECCCC------------CcccCHHHHHHHHHHcCCCEEEE
Confidence 3 57999999998421 2335689999999852 35999999999999999999999
Q ss_pred EeccCCCChhHHHHHH
Q 023022 255 IHFSARHKVDEIRRAV 270 (288)
Q Consensus 255 ~H~~~~~~~~~~~~~~ 270 (288)
+|+++ .+.+++++.+
T Consensus 208 ~H~~~-~~~~~~~~~l 222 (235)
T 3kl7_A 208 YHYGD-TKIGELKDAL 222 (235)
T ss_dssp ESCTT-CCTTHHHHHT
T ss_pred EcCCC-CCHHHHHHHH
Confidence 99999 5555555443
No 10
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.89 E-value=1.6e-22 Score=188.17 Aligned_cols=201 Identities=12% Similarity=0.135 Sum_probs=133.7
Q ss_pred eEEEEee--ecCceeEEEeCCceEEEeCCCCCcc---------------------------------------ccCcCEE
Q 023022 20 YKVEGLS--IAGHETCIIFPSLDLAFDIGRCPSR---------------------------------------ALSQNFL 58 (288)
Q Consensus 20 ~~v~g~~--~~~~~s~~~i~~~~iLiD~G~~~~~---------------------------------------~~~i~~I 58 (288)
++++|.. .++|+..+...+..+|||||.+... ..+|++|
T Consensus 9 i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v 88 (429)
T 2az4_A 9 VTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAV 88 (429)
T ss_dssp EEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEE
T ss_pred EEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccCCEE
Confidence 5666643 3454433333467999999976510 1258999
Q ss_pred EEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhhh-hcCCC----CCceEEEEcCCCCeEEecCCeE
Q 023022 59 FISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHR-RMDHS----ELNHTLVGLDVGEEFCMRKDLF 133 (288)
Q Consensus 59 ~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~-~~~~~----~~~~~~~~l~~g~~~~i~~~~~ 133 (288)
||||+|.||++|++.|.. +++||+++.+.+.+........ +.... ....+++.+++|+++.++ +++
T Consensus 89 ~lTH~H~DHiggl~~l~~--------~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~ 159 (429)
T 2az4_A 89 FLSHAHLDHSRMINYLDP--------AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVG-EIS 159 (429)
T ss_dssp ECSCSCHHHHTTGGGBCT--------TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEET-TEE
T ss_pred EECCchHHHhCcHhHhcC--------CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEEC-CEE
Confidence 999999999999998742 4679999988877765332110 00000 012356788999999995 999
Q ss_pred EEEEEcCCc-CCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccc----cccccccC
Q 023022 134 VKAFKTYHV-IQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIV----DEANIDVL 208 (288)
Q Consensus 134 i~~~~~~H~-~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~----~~~~~~~~ 208 (288)
|++++++|+ +++++|++..++ .+++|+||+...... .......+
T Consensus 160 v~~~~~~H~~~gs~~~~i~~~~-------------------------------~~i~~tGD~~~~~~~~~~~~~~~~~~~ 208 (429)
T 2az4_A 160 VEIVPVDHDAYGASALLIRTPD-------------------------------HFITYTGDLRLHGHNREETLAFCEKAK 208 (429)
T ss_dssp EEEEECCCSSTTCEEEEEEETT-------------------------------EEEEECCSCCSSSTTHHHHHHHHHHHT
T ss_pred EEEEECCCCChhhEEEEEEeCC-------------------------------cEEEECCCcccCCCchHHHHHHHHhcc
Confidence 999999994 679999997642 479999999763211 11223456
Q ss_pred CCCEEEEecccCCCCC-cHHHHhhcCCCcHHHHHH----HHHHcCCCeEEEEeccCCCC
Q 023022 209 RARILVMESTYVDDST-TVEQARDYGHTHLSEIVE----YAEKFENKAILLIHFSARHK 262 (288)
Q Consensus 209 ~~d~li~E~t~~~~~~-~~~~~~~~~H~~~~~~~~----~~~~~~~~~~~l~H~~~~~~ 262 (288)
++|+||+||||..... .... ...+|.+..++.+ ++++ .+++++++|+++++.
T Consensus 209 ~~d~Li~Est~~~~~~~~~~~-~~~~~~s~~~~~~~i~~~~~~-~~~rlil~h~~~~~~ 265 (429)
T 2az4_A 209 HTELLMMEGVSISFPEREPDP-AQIAVVSEEDLVQHLVRLELE-NPNRQITFNGYPANV 265 (429)
T ss_dssp TCSEEEEECCGGGSCCCCCCT-TBCCCCSHHHHHHHHHHHHHT-CSSSCEEEEECTTCH
T ss_pred CCCEEEECCCCcCcccccccc-cCCCCCCHHHHHHHHHHHHHh-CCCcEEEEEeccchH
Confidence 9999999999976220 0000 0234887777643 3433 367899999998655
No 11
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.88 E-value=4.4e-22 Score=185.32 Aligned_cols=221 Identities=17% Similarity=0.156 Sum_probs=143.3
Q ss_pred eEEEEeeecCceeEEEe--CCceEEEeCCCCCcc------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCC
Q 023022 20 YKVEGLSIAGHETCIIF--PSLDLAFDIGRCPSR------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKP 85 (288)
Q Consensus 20 ~~v~g~~~~~~~s~~~i--~~~~iLiD~G~~~~~------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~ 85 (288)
++++|....-..+|+++ .+..+|||||..... ..+||+|||||+|.||++|++.|.+. ...
T Consensus 3 i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~-----~~~ 77 (431)
T 3iek_A 3 IVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE-----GYR 77 (431)
T ss_dssp EEECSCSSSSSCCCEEEEETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT-----TCC
T ss_pred EEEeCCCCCCCCcEEEEEECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc-----CCC
Confidence 45666543333355655 467999999983321 12589999999999999999999762 124
Q ss_pred CEEeCCcchHHHHHHHHHhhhhcCCC-CCc--------eEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEeccc
Q 023022 86 PTIIVPSCIKEDVEQLFEVHRRMDHS-ELN--------HTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQK 156 (288)
Q Consensus 86 ~~i~~p~~~~~~l~~~~~~~~~~~~~-~~~--------~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~~ 156 (288)
.+||+++.+.+.+...+......... .+. ..++++++++++.+ ++++|++++++|++++++|.+..+
T Consensus 78 ~~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l-~g~~v~~~~agH~~Gs~~~~i~~~--- 153 (431)
T 3iek_A 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRL-GALSLAFGQAGHLPGSAFVVAQGE--- 153 (431)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEE-TTEEEEEEECCSSTTCEEEEEEET---
T ss_pred CeEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEe-CCEEEEEEeCCCCcCceEEEEEEC---
Confidence 57999999988777555433222110 000 24788999999999 599999999999999999999753
Q ss_pred cchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCC--ccccccccccCCCCEEEEecccCCCCCcHHHHhhcCC
Q 023022 157 LKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSD--FIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGH 234 (288)
Q Consensus 157 ~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~--~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H 234 (288)
+ .+++|+||+... .... ......++|+||+||||.+.... ..+
T Consensus 154 -------------------~---------~~ilfsGD~~~~~~~~l~-~~~~~~~~D~LI~EsTy~~~~h~------~~~ 198 (431)
T 3iek_A 154 -------------------G---------RTLVYSGDLGNREKDVLP-DPSLPPLADLVLAEGTYGDRPHR------PYR 198 (431)
T ss_dssp -------------------T---------EEEEECCCCCCTTSSSSC-CCCBCCCCSEEEEECTTTTCCCC------CHH
T ss_pred -------------------C---------EEEEEeCCCCCCCCcccC-CccccCCccEEEEEcccCCcCCC------ChH
Confidence 2 479999999873 2211 12356789999999999986520 001
Q ss_pred CcHHHHHHHHHHc--CCCeEEEEeccCCCChhHHHHHHHhCCCcccceeeeccc
Q 023022 235 THLSEIVEYAEKF--ENKAILLIHFSARHKVDEIRRAVDAVPAPLAGRVFALTE 286 (288)
Q Consensus 235 ~~~~~~~~~~~~~--~~~~~~l~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (288)
...+++.+.+++. ...+++++.|+..... |+...++.+.+. ...++++.+
T Consensus 199 ~~~~~l~~~i~~~~~~gg~vlIp~fa~gR~q-ell~~l~~~~~~-~~~~pi~~~ 250 (431)
T 3iek_A 199 ETVREFLEILEKTLSQGGKVLIPTFAVERAQ-EILYVLYTHGHR-LPRAPIYLD 250 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCTTTHHH-HHHHHHHHHGGG-SCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeccchHHH-HHHHHHHHHHHh-ccCCCEEEe
Confidence 1222333333222 3568888888865543 455444433322 234444443
No 12
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.88 E-value=2.1e-21 Score=186.23 Aligned_cols=214 Identities=15% Similarity=0.141 Sum_probs=142.2
Q ss_pred ceEEEEe--eecCceeEEEeCCceEEEeCCCCCcc-------------------ccCcCEEEEecCChhhhCcHHHHHHH
Q 023022 19 GYKVEGL--SIAGHETCIIFPSLDLAFDIGRCPSR-------------------ALSQNFLFISHAHMDHIGGLPMYVAT 77 (288)
Q Consensus 19 ~~~v~g~--~~~~~~s~~~i~~~~iLiD~G~~~~~-------------------~~~i~~I~iTH~H~DH~~gl~~ll~~ 77 (288)
.++++|. +.|+|+.++...+..+|||||..... ..+|++|||||+|.||++|+++|+..
T Consensus 18 ~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~ 97 (562)
T 3bk2_A 18 EIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPM 97 (562)
T ss_dssp EEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHH
T ss_pred EEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHh
Confidence 3556664 45666555555577999999953210 12589999999999999999999875
Q ss_pred hCCCCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCc-CCcceEEEEEeccc
Q 023022 78 RGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHV-IQSQGYVVYSVKQK 156 (288)
Q Consensus 78 ~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~-~~~~g~~i~~~~~~ 156 (288)
.. ....+++||+++.+.+.+...+.... . ......++.+++++++.++++++|++++++|+ +++++|++..++
T Consensus 98 ~~-~~~~~~pIy~~~~t~~~l~~~l~~~~-~--~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~-- 171 (562)
T 3bk2_A 98 IF-GKESPVPIYGARLTLGLLRGKLEEFG-L--RPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPI-- 171 (562)
T ss_dssp HH-CSCCCSEEEEEHHHHHHHHHHHHHTT-C--CSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETT--
T ss_pred hc-cccCCceEEeCHHHHHHHHHHHHHcC-C--CcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEECC--
Confidence 42 12346789999998887776554321 1 11024678899999999963399999999885 689999997642
Q ss_pred cchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccc-----cc--ccc-cc-CCCCEEEEecccCCCCCcHH
Q 023022 157 LKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIV-----DE--ANI-DV-LRARILVMESTYVDDSTTVE 227 (288)
Q Consensus 157 ~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~-----~~--~~~-~~-~~~d~li~E~t~~~~~~~~~ 227 (288)
.+++|+||+..+..+ .. ... .. +++|+|++|+||.....
T Consensus 172 -----------------------------~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g--- 219 (562)
T 3bk2_A 172 -----------------------------GTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPG--- 219 (562)
T ss_dssp -----------------------------EEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCS---
T ss_pred -----------------------------eEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCC---
Confidence 479999999763111 00 011 11 58999999999985431
Q ss_pred HHhhcCCCcHH-HHHHHHHHcCCCeEEEEeccCCCChhH-HHHHHHhC
Q 023022 228 QARDYGHTHLS-EIVEYAEKFENKAILLIHFSARHKVDE-IRRAVDAV 273 (288)
Q Consensus 228 ~~~~~~H~~~~-~~~~~~~~~~~~~~~l~H~~~~~~~~~-~~~~~~~~ 273 (288)
....+.++. ++.+.+++.+ ++++++||++++...+ +..+.+.+
T Consensus 220 --~~~~e~~v~~~l~~~~~~~~-grvii~~fas~~~r~q~il~~a~~~ 264 (562)
T 3bk2_A 220 --YTPSEMEIAKELDRVIGRAP-GRVFVTTFASHIHRIQSVIWAAEKY 264 (562)
T ss_dssp --CCCCHHHHHHHHHHHHHHCS-SCEEEECCTTCHHHHHHHHHHHHHT
T ss_pred --CCChHHHHHHHHHHHHHhCC-CEEEEEEccccchHHHHHHHHHHHh
Confidence 011122232 3345555544 8999999998775433 44444443
No 13
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.85 E-value=1.6e-20 Score=182.91 Aligned_cols=211 Identities=18% Similarity=0.170 Sum_probs=136.8
Q ss_pred eEEEEeeecCceeEEEeC--CceEEEeCCCCCc-------------------cc--cCcCEEEEecCChhhhCcHHHHHH
Q 023022 20 YKVEGLSIAGHETCIIFP--SLDLAFDIGRCPS-------------------RA--LSQNFLFISHAHMDHIGGLPMYVA 76 (288)
Q Consensus 20 ~~v~g~~~~~~~s~~~i~--~~~iLiD~G~~~~-------------------~~--~~i~~I~iTH~H~DH~~gl~~ll~ 76 (288)
++++|.+..-..+|++++ +..+|||||.... .. .+||+|||||+|.||++|++.|+.
T Consensus 191 i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~ 270 (651)
T 3af5_A 191 ITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFR 270 (651)
T ss_dssp EEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHH
T ss_pred EEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHh
Confidence 566665432234566664 6799999997642 11 348999999999999999999986
Q ss_pred HhCCCCCCCCEEeCCcchHHHHHHHHHhhhhc---C--CCCC--------ceEEEEcCCCCeEEecCCeEEEEEEcCCcC
Q 023022 77 TRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRM---D--HSEL--------NHTLVGLDVGEEFCMRKDLFVKAFKTYHVI 143 (288)
Q Consensus 77 ~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~---~--~~~~--------~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~ 143 (288)
.. ....+||+++.+.+.+...+...... . ...+ ...++.+++++++.+.++++|++++++|++
T Consensus 271 ~~----~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~ 346 (651)
T 3af5_A 271 YN----LFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHIL 346 (651)
T ss_dssp TT----CCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSST
T ss_pred cC----CCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCc
Confidence 21 01357999998877766443321100 0 0000 013678899999999449999999999999
Q ss_pred CcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCc--cccccccccCCCCEEEEecccCC
Q 023022 144 QSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDF--IVDEANIDVLRARILVMESTYVD 221 (288)
Q Consensus 144 ~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~--~~~~~~~~~~~~d~li~E~t~~~ 221 (288)
++++|.+..++ + ..+++|+||+..+. +.........++|+|++||||.+
T Consensus 347 Gs~~~~i~~~~---------------------~--------~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~ 397 (651)
T 3af5_A 347 GSAIVHLHIGN---------------------G--------LHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGG 397 (651)
T ss_dssp TCEEEEEEETT---------------------T--------TTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCS
T ss_pred CcEEEEEEECC---------------------C--------ceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCC
Confidence 99999997642 1 02799999998732 22211123578999999999987
Q ss_pred CCCcHHHHhhcCCCcH----HHHHHHHHHc--CCCeEEEEeccCCCChhHHHHHHHh
Q 023022 222 DSTTVEQARDYGHTHL----SEIVEYAEKF--ENKAILLIHFSARHKVDEIRRAVDA 272 (288)
Q Consensus 222 ~~~~~~~~~~~~H~~~----~~~~~~~~~~--~~~~~~l~H~~~~~~~~~~~~~~~~ 272 (288)
.. ..|.+- +++.+.+.+. ..+++++..|+.... .++..+++.
T Consensus 398 ~~--------~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~favgR~-qell~~l~~ 445 (651)
T 3af5_A 398 AN--------DIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMAVGRA-QEVMMVLEE 445 (651)
T ss_dssp TT--------CCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTTTHH-HHHHHHHHH
T ss_pred CC--------CCCCCHHHHHHHHHHHHHHHHhCCCEEEEeccCccHH-HHHHHHHHH
Confidence 54 123332 2333333332 457888888885433 345544433
No 14
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.85 E-value=4.9e-21 Score=186.25 Aligned_cols=170 Identities=22% Similarity=0.233 Sum_probs=117.2
Q ss_pred eEEEEeeecCceeEEEeC--CceEEEeCCCCCcc----------------ccCcCEEEEecCChhhhCcHHHHHHHhCCC
Q 023022 20 YKVEGLSIAGHETCIIFP--SLDLAFDIGRCPSR----------------ALSQNFLFISHAHMDHIGGLPMYVATRGLY 81 (288)
Q Consensus 20 ~~v~g~~~~~~~s~~~i~--~~~iLiD~G~~~~~----------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~ 81 (288)
++++|....-..+|++++ +..+|||||..... ..+|++|||||+|.||++|++.|+..
T Consensus 182 i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~---- 257 (636)
T 2ycb_A 182 LTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY---- 257 (636)
T ss_dssp EEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT----
T ss_pred EEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhc----
Confidence 566665432235566664 56999999976421 12589999999999999999999762
Q ss_pred CCCCCEEeCCcchHHHHHHHHHhhhhc----C-CCCC--------ceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceE
Q 023022 82 RMKPPTIIVPSCIKEDVEQLFEVHRRM----D-HSEL--------NHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGY 148 (288)
Q Consensus 82 ~~~~~~i~~p~~~~~~l~~~~~~~~~~----~-~~~~--------~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~ 148 (288)
....+||+++.+.+.+...+...... . ...+ ...+..+.+++++.+.++++|++++++|++++++|
T Consensus 258 -~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~ 336 (636)
T 2ycb_A 258 -GYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMA 336 (636)
T ss_dssp -TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEE
T ss_pred -CCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEE
Confidence 12357999998877665443321100 0 0000 01367889999999944999999999999999999
Q ss_pred EEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCc--cccccccccCCCCEEEEecccCCCC
Q 023022 149 VVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDF--IVDEANIDVLRARILVMESTYVDDS 223 (288)
Q Consensus 149 ~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~--~~~~~~~~~~~~d~li~E~t~~~~~ 223 (288)
.+..++ +. .+++|+||+.++. +.........++|+|++||||.+..
T Consensus 337 ~i~~~~---------------------~~--------~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~ 384 (636)
T 2ycb_A 337 HLHIGD---------------------GQ--------HNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHE 384 (636)
T ss_dssp EEEETT---------------------TT--------TCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGG
T ss_pred EEEECC---------------------Ce--------EEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCC
Confidence 997642 10 1699999998742 2221112356899999999998643
No 15
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.85 E-value=2e-20 Score=163.07 Aligned_cols=206 Identities=15% Similarity=0.183 Sum_probs=138.7
Q ss_pred ceEEEEeeecCceeEEEeC--CceEEEeCCCCC----------------c---------cc-c-CcCEEEEecCChhhhC
Q 023022 19 GYKVEGLSIAGHETCIIFP--SLDLAFDIGRCP----------------S---------RA-L-SQNFLFISHAHMDHIG 69 (288)
Q Consensus 19 ~~~v~g~~~~~~~s~~~i~--~~~iLiD~G~~~----------------~---------~~-~-~i~~I~iTH~H~DH~~ 69 (288)
.++++| .+|++++ +.+|||||+-.. . .. . ++|+|+|||.|.||++
T Consensus 6 ~it~lG------ha~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~ 79 (264)
T 3rpc_A 6 QYTHIR------NATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWD 79 (264)
T ss_dssp EEEEEE------TTEEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSC
T ss_pred EEEEEe------CcEEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCC
Confidence 466676 4566664 669999995321 0 01 1 6899999999999999
Q ss_pred cHHHHHHHhCCCCCCCCEEeCC-cchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCC----
Q 023022 70 GLPMYVATRGLYRMKPPTIIVP-SCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQ---- 144 (288)
Q Consensus 70 gl~~ll~~~~~~~~~~~~i~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~---- 144 (288)
++..+.. ....++|++ ....+.+... .+. ++..+ ++++.++ +++|+++|+.|+.+
T Consensus 80 ~~~~~~~------~~~~~v~~~~~~~~~~l~~~----------g~~-~~~~~--~~~~~~~-~~~i~~~pa~H~~~~~~~ 139 (264)
T 3rpc_A 80 DTAINSI------PKSLPIFVQNTADKELITSQ----------GFI-DVRII--FESLEFN-GITLRKTGGSHGTVEMYA 139 (264)
T ss_dssp HHHHHHS------CTTSCEEESSHHHHHHHHHT----------TCS-CEEEC--SSEEEET-TEEEEEECCCSSCHHHHT
T ss_pred CHHHHhh------ccCCeEEEeCHHHHHHHHhc----------CCC-eeEEe--cccEEEC-CEEEEEeccccCCccccc
Confidence 9876643 234678988 6655554321 111 23344 5789995 99999999999863
Q ss_pred ----------cceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEE
Q 023022 145 ----------SQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILV 214 (288)
Q Consensus 145 ----------~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li 214 (288)
++||+++.++ | ++++|+|||.+..-... .....++|+++
T Consensus 140 ~p~~~~~~~~~~g~~i~~~~---------------------~---------~~i~~~GDt~~~~~~~~-~~~~~~~Dv~i 188 (264)
T 3rpc_A 140 NPVLAPLAGDAMGVIFEAAD---------------------E---------PTVYLVGDTVWTSDVEK-ALLRFDPNVII 188 (264)
T ss_dssp STTHHHHHCCCCEEEEECTT---------------------S---------CCEEECCSCCSCHHHHH-HHHHHCCSEEE
T ss_pred cccccccccccEEEEEEeCC---------------------c---------cEEEEECCcCchHHHHH-HHHHhCCCEEE
Confidence 5899997531 2 57999999998421111 11123699999
Q ss_pred EecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccC----CCChhHHHHHHHhCCCcccceeeecccC
Q 023022 215 MESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSA----RHKVDEIRRAVDAVPAPLAGRVFALTEG 287 (288)
Q Consensus 215 ~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g 287 (288)
+|+...... ......|++++++.++++.+++++++++|++. .-+.+++.+..+... ...++..+.+|
T Consensus 189 l~~g~~~~~----~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g--~~~~~~~~~~G 259 (264)
T 3rpc_A 189 MNTGYAQIL----GFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNN--IESHVAVPEDG 259 (264)
T ss_dssp EECSCBCBT----TCSSCSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTT--CTTTEECCCTT
T ss_pred EecCccccc----cccCCcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHcC--CCCcEEecCCC
Confidence 999855322 11246799999999999999999999999996 233344444444332 22567777766
No 16
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.84 E-value=1.8e-20 Score=182.23 Aligned_cols=223 Identities=16% Similarity=0.148 Sum_probs=137.3
Q ss_pred eEEEEeeecCceeEEEeC--CceEEEeCCCCCc---------------cccCcCEEEEecCChhhhCcHHHHHHHhCCCC
Q 023022 20 YKVEGLSIAGHETCIIFP--SLDLAFDIGRCPS---------------RALSQNFLFISHAHMDHIGGLPMYVATRGLYR 82 (288)
Q Consensus 20 ~~v~g~~~~~~~s~~~i~--~~~iLiD~G~~~~---------------~~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~ 82 (288)
++++|.+..-..+|++++ +..+|||||.... ...+||+|||||+|.||++|++.|+..
T Consensus 186 I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~----- 260 (640)
T 2xr1_A 186 VTALGGCKEVGRSCFLLSTPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY----- 260 (640)
T ss_dssp EEEEECSSSSBCCEEEEECSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT-----
T ss_pred EEEEecCCCCCCcEEEEEECCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhc-----
Confidence 566664432224566664 5699999997532 112489999999999999999999862
Q ss_pred CCCCEEeCCcchHHHHHHHHHhhhhc----C-CCCCc--------eEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEE
Q 023022 83 MKPPTIIVPSCIKEDVEQLFEVHRRM----D-HSELN--------HTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYV 149 (288)
Q Consensus 83 ~~~~~i~~p~~~~~~l~~~~~~~~~~----~-~~~~~--------~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~ 149 (288)
....+||+++.+.+.+...+...... . ...+. ..+..+.+++++.+.++++|++++++|++++++|.
T Consensus 261 ~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~ 340 (640)
T 2xr1_A 261 GYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISH 340 (640)
T ss_dssp TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEE
T ss_pred CCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEE
Confidence 12357999998877665443321100 0 00000 13678899999999449999999999999999999
Q ss_pred EEEeccccchhhcCCChHHHHHHHhcCceecceEeCC--eEEEecCCCCCc--cccccccccCCCCEEEEecccCCCCCc
Q 023022 150 VYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTP--EVAFTGDTMSDF--IVDEANIDVLRARILVMESTYVDDSTT 225 (288)
Q Consensus 150 i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~--~i~y~gD~~~~~--~~~~~~~~~~~~d~li~E~t~~~~~~~ 225 (288)
+..++ . +++|+||+..+. +.........++|+|++||||.+..
T Consensus 341 i~~~~-------------------------------~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~-- 387 (640)
T 2xr1_A 341 FHIGD-------------------------------GLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNAN-- 387 (640)
T ss_dssp EEETT-------------------------------TTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTT--
T ss_pred EEECC-------------------------------ceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCc--
Confidence 97542 3 799999998732 2221112356899999999998753
Q ss_pred HHHHhhcCCCcH----HHHHHHHHHc--CCCeEEEEeccCCCChhHHHHHHHhCC-CcccceeeecccC
Q 023022 226 VEQARDYGHTHL----SEIVEYAEKF--ENKAILLIHFSARHKVDEIRRAVDAVP-APLAGRVFALTEG 287 (288)
Q Consensus 226 ~~~~~~~~H~~~----~~~~~~~~~~--~~~~~~l~H~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g 287 (288)
..|.+. ++..+.+++. ...++++..|+....+ ++...++.+. +.....+.++.+|
T Consensus 388 ------~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~favGR~q-ell~~l~~~~~~~~~~~~~V~~dg 449 (640)
T 2xr1_A 388 ------AFQPALKDAEKHLQMVVKNTIERGGIAVIPAFAVGRSQ-EVMIVLEESIRKGLIPEVPVYLDG 449 (640)
T ss_dssp ------CCCCCHHHHHHHHHHHC--------CEEEECCTTTHHH-HHHHHHHHHHHHTSSCCCCEEEES
T ss_pred ------cCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecccchHH-HHHHHHHHHHHhCCCCCCcEEEEh
Confidence 124433 3333333332 2356777777754433 3444333222 2222334555444
No 17
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.84 E-value=8.8e-20 Score=171.13 Aligned_cols=198 Identities=20% Similarity=0.297 Sum_probs=131.0
Q ss_pred eEEEEeeecCceeEEEeC--CceEEEeCCCCCc----c---------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCC
Q 023022 20 YKVEGLSIAGHETCIIFP--SLDLAFDIGRCPS----R---------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMK 84 (288)
Q Consensus 20 ~~v~g~~~~~~~s~~~i~--~~~iLiD~G~~~~----~---------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~ 84 (288)
++++|.+..-..+|++++ +..+|||||.... . ..+||+|||||+|.||++|++.+....++
T Consensus 14 i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~---- 89 (459)
T 2i7t_A 14 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSF---- 89 (459)
T ss_dssp EEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSC----
T ss_pred EEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCC----
Confidence 666775544345677764 6799999997421 1 12589999999999999999999865432
Q ss_pred CCEEeCCcchHHHHHHHHHhhhhcCC--------C--CC---ceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEE
Q 023022 85 PPTIIVPSCIKEDVEQLFEVHRRMDH--------S--EL---NHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151 (288)
Q Consensus 85 ~~~i~~p~~~~~~l~~~~~~~~~~~~--------~--~~---~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~ 151 (288)
+.++|+++.+.+.+...+........ . .+ ..++..++.++++.++ ++++++++++|++++++|++.
T Consensus 90 ~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gi~v~~~~~GH~~Gs~~~~i~ 168 (459)
T 2i7t_A 90 KGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVA-GIKFWCYHAGHVLGAAMFMIE 168 (459)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEET-TEEEEEEECCSSTTCEEEEEE
T ss_pred CCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEEC-CEEEEEEeCCCccCcEEEEEE
Confidence 35799988877665544432110000 0 00 0146788899999995 999999999999999999997
Q ss_pred EeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCcc--ccccccccCCCCEEEEecccCCCCCcHHHH
Q 023022 152 SVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFI--VDEANIDVLRARILVMESTYVDDSTTVEQA 229 (288)
Q Consensus 152 ~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~--~~~~~~~~~~~d~li~E~t~~~~~~~~~~~ 229 (288)
.+ | .+++|+||+....- .........++|+||+|+||.+..
T Consensus 169 ~~----------------------~---------~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~------ 211 (459)
T 2i7t_A 169 IA----------------------G---------VKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHI------ 211 (459)
T ss_dssp ET----------------------T---------EEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCC------
T ss_pred EC----------------------C---------cEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCC------
Confidence 53 2 47999999987421 111111235899999999999754
Q ss_pred hhcCCCcHH-------HHHHHHHHcCCCeEEEEeccCCCChh
Q 023022 230 RDYGHTHLS-------EIVEYAEKFENKAILLIHFSARHKVD 264 (288)
Q Consensus 230 ~~~~H~~~~-------~~~~~~~~~~~~~~~l~H~~~~~~~~ 264 (288)
|...+ +.++...+ ...++++.-|+.-...+
T Consensus 212 ----~~~~~~~~~~l~~~i~~~~~-~~g~vlip~fa~gr~qe 248 (459)
T 2i7t_A 212 ----HEKREEREARFCNTVHDIVN-RGGRGLIPVFALGRAQE 248 (459)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHH-TTCEEEEECCSSSSHHH
T ss_pred ----CCChHHHHHHHHHHHHHHHH-CCCEEEEEecchhHHHH
Confidence 22222 22222222 34678888888655533
No 18
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.84 E-value=1.8e-19 Score=163.98 Aligned_cols=181 Identities=12% Similarity=0.144 Sum_probs=121.9
Q ss_pred CcCEEEEecCChhhhC--cHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCC
Q 023022 54 SQNFLFISHAHMDHIG--GLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKD 131 (288)
Q Consensus 54 ~i~~I~iTH~H~DH~~--gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~ 131 (288)
+||+|||||.|.||++ ++..+... ....++||+|+...+.+... . + . ..+++.+++|+.+.++ +
T Consensus 109 ~id~VliTH~H~DHig~~~l~~l~~~----~~~~~~v~~p~~~~~~l~~~---g--~--~--~~~~~~l~~g~~~~~g-~ 174 (360)
T 2wyl_A 109 QIDAVLATHDHNDHIDVNVAAAVMQN----CADDVPFIGPKTCVDLWIGW---G--V--P--KERCIVVKPGDVVKVK-D 174 (360)
T ss_dssp CCSEEECSBSCTTTCCHHHHHHHHHH----SCTTCCEEECHHHHHHHHHH---T--C--C--GGGEEECCTTCEEEET-T
T ss_pred CCCEEEECCCchhcCCHHHHHHHHhc----CCCCCEEEEcHHHHHHHHHc---C--C--C--hheEEEcCCCCEEEEC-C
Confidence 4899999999999995 23334331 12257899998877665431 0 1 0 1257789999999995 9
Q ss_pred eEEEEEEcCCcC---------------------CcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEE
Q 023022 132 LFVKAFKTYHVI---------------------QSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAF 190 (288)
Q Consensus 132 ~~i~~~~~~H~~---------------------~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y 190 (288)
++|+++++.|+. .++||+++.+ | .+++|
T Consensus 175 ~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~----------------------g---------~~i~~ 223 (360)
T 2wyl_A 175 IEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTP----------------------G---------GSLYH 223 (360)
T ss_dssp EEEEEEECCCC------------------CCTTTBEEEEEEET----------------------T---------EEEEE
T ss_pred EEEEEEeccCcccccccccccccccccccccCcccEEEEEEEC----------------------C---------cEEEE
Confidence 999999998852 3788988753 2 47999
Q ss_pred ecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCCC----ChhHH
Q 023022 191 TGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARH----KVDEI 266 (288)
Q Consensus 191 ~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~~----~~~~~ 266 (288)
+||+.+...... .....++|++++.+..... ....|+++++++++++++++++++++|+++.. +.+++
T Consensus 224 sGDt~~~~~~~~-i~~~~~~Dv~il~~g~~~~-------~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~ 295 (360)
T 2wyl_A 224 SGDSHYSNYYAK-HGNEHQIDVALGSYGENPR-------GITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEI 295 (360)
T ss_dssp CTTCCCCTTHHH-HHHHSCCCEEEEEBCCCCT-------TCCCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHH
T ss_pred eCCCCcCHHHHH-HhhCCCCCEEEecCCCCcc-------cccCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHH
Confidence 999987421111 1112378999997653111 12579999999999999999999999999842 34455
Q ss_pred HHHHHhCC--CcccceeeecccC
Q 023022 267 RRAVDAVP--APLAGRVFALTEG 287 (288)
Q Consensus 267 ~~~~~~~~--~~~~~~~~~~~~g 287 (288)
++..+... .++..++.++.+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~G 318 (360)
T 2wyl_A 296 RVLWEMKKDRLKYGFKPFIWQVG 318 (360)
T ss_dssp HHHHHHHTTTTTCCCEECBCCTT
T ss_pred HHHHHhhhhhhcCCcceEEccCC
Confidence 55444221 1233456566555
No 19
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.84 E-value=1.8e-19 Score=164.99 Aligned_cols=181 Identities=13% Similarity=0.149 Sum_probs=122.4
Q ss_pred CcCEEEEecCChhhhC--cHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCC
Q 023022 54 SQNFLFISHAHMDHIG--GLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKD 131 (288)
Q Consensus 54 ~i~~I~iTH~H~DH~~--gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~ 131 (288)
++|+|||||.|.||++ ++..+... ..+.++||+|+...+.+... . . . ..+++.+++|+.+.++ +
T Consensus 133 ~iD~IliTH~H~DHig~~~l~~l~~~----~~~~~~v~~~~~~~~~l~~~---g--~--~--~~~~~~l~~g~~~~~g-~ 198 (379)
T 3bv6_A 133 EIDAVLASHDHADHIDVNVAAAVLQN----CGEHVKFIGPQACVDLWLGW---G--V--P--QERCIVAKVGDVLEIG-D 198 (379)
T ss_dssp CCSEEECSBCSGGGCCHHHHHHHHHH----SCTTCEEEECHHHHHHHHHH---T--C--C--GGGEEECCTTCEEEET-T
T ss_pred CCCEEEECCCCcccCChHHHHHHHhc----CCCCcEEEecHHHHHHHHHc---C--C--C--hhhEEEeCCCCEEEEC-C
Confidence 4899999999999994 33333321 11367899998877666531 0 1 0 1257789999999995 9
Q ss_pred eEEEEEEcCCcC----------------------CcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEE
Q 023022 132 LFVKAFKTYHVI----------------------QSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVA 189 (288)
Q Consensus 132 ~~i~~~~~~H~~----------------------~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~ 189 (288)
++|+++++.|+. .++||+++.+ | .+++
T Consensus 199 ~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~----------------------g---------~~i~ 247 (379)
T 3bv6_A 199 VKIRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETS----------------------G---------GSVY 247 (379)
T ss_dssp EEEEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEET----------------------T---------EEEE
T ss_pred EEEEEEecccccccccccccccccccccccccCCceEEEEEEeC----------------------C---------eEEE
Confidence 999999998852 2789999753 2 5799
Q ss_pred EecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCCC----ChhH
Q 023022 190 FTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARH----KVDE 265 (288)
Q Consensus 190 y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~~----~~~~ 265 (288)
|+||+.+...... .....++|++++.+..... ....|+++++++++++++++++++++|+++.. +.++
T Consensus 248 ~sGDt~~~~~~~~-i~~~~~~Dv~il~~g~~~~-------~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e 319 (379)
T 3bv6_A 248 HSGDSHYSNYYAK-HGNDYQIDVALLSYGENPR-------GVTDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPRE 319 (379)
T ss_dssp ECTTCCCCTTHHH-HHHHSCCSEEEEEBCCCCT-------TCCCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHH
T ss_pred EeCCCCccHHHHH-HhhcCCCCEEEecCCCCcc-------cccccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHH
Confidence 9999987421111 1112278999997643111 12579999999999999999999999999853 3345
Q ss_pred HHHHHHhC-C-CcccceeeecccC
Q 023022 266 IRRAVDAV-P-APLAGRVFALTEG 287 (288)
Q Consensus 266 ~~~~~~~~-~-~~~~~~~~~~~~g 287 (288)
+.+..++. . .++..++.++.+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~G 343 (379)
T 3bv6_A 320 IEVLWNMKKDRLQYQFAPFFWQVG 343 (379)
T ss_dssp HHHHHHHHTTTTTCCCEECBCCTT
T ss_pred HHHHHHhhhhhhcCCCceEEccCC
Confidence 54444321 1 1234556666665
No 20
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.83 E-value=2.9e-19 Score=170.92 Aligned_cols=195 Identities=19% Similarity=0.191 Sum_probs=132.5
Q ss_pred cCceeEEEeCCceEEEeCCCCCcc-------------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEE
Q 023022 28 AGHETCIIFPSLDLAFDIGRCPSR-------------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTI 88 (288)
Q Consensus 28 ~~~~s~~~i~~~~iLiD~G~~~~~-------------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i 88 (288)
|+|+.++...+..+|||||..... ..+|++|||||+|.||++|+++++..+ .++|
T Consensus 21 G~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~------~~pI 94 (555)
T 3zq4_A 21 GKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQV------NIPV 94 (555)
T ss_dssp SCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTC------CCCE
T ss_pred CCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhc------CceE
Confidence 455555555577999999964311 125899999999999999999997532 4569
Q ss_pred eCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCC-cCCcceEEEEEeccccchhhcCCChH
Q 023022 89 IVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYH-VIQSQGYVVYSVKQKLKQEYLGLPGD 167 (288)
Q Consensus 89 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H-~~~~~g~~i~~~~~~~~~~~~g~~~~ 167 (288)
|+++.+.+.+...+...... ....++.+.+++++.++ +++|++++++| .+++++|.+..++
T Consensus 95 y~t~~t~~ll~~~l~~~~~~----~~~~~~~v~~g~~~~ig-~~~v~~~~~~H~~pgs~~~~i~~~~------------- 156 (555)
T 3zq4_A 95 YGGKLAIGLLRNKLEEHGLL----RQTKLNIIGEDDIVKFR-KTAVSFFRTTHSIPDSYGIVVKTPP------------- 156 (555)
T ss_dssp EECHHHHHHHHHHHHHHSTT----TTCCEEECCTTCCEEET-TEEEEEEEEBCSSSSEEEEEEEETT-------------
T ss_pred EECHHHHHHHHHHHHHcCcc----CCCceEEeCCCCEEEEC-CEEEEEEeCCCCCcCcEEEEEEECC-------------
Confidence 99999988887655432211 12367889999999995 99999999987 6789999998652
Q ss_pred HHHHHHhcCceecceEeCCeEEEecCCCCCccc--c-cccccc-----CCCCEEEEecccCCCCCcHHHHhhcCCCcHHH
Q 023022 168 EIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIV--D-EANIDV-----LRARILVMESTYVDDSTTVEQARDYGHTHLSE 239 (288)
Q Consensus 168 ~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~--~-~~~~~~-----~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~ 239 (288)
.+++|+||+..+..+ . .....+ +++|+|++||||..... ...+-++
T Consensus 157 ------------------~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~--------~~~se~~ 210 (555)
T 3zq4_A 157 ------------------GNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPE--------FTMSERR 210 (555)
T ss_dssp ------------------EEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCS--------CCCCHHH
T ss_pred ------------------cEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCC--------CCCCHHH
Confidence 479999999863211 0 011111 57999999999998541 1233333
Q ss_pred HH----HHHHHcCCCeEEEEeccCCCChh-HHHHHHHhC
Q 023022 240 IV----EYAEKFENKAILLIHFSARHKVD-EIRRAVDAV 273 (288)
Q Consensus 240 ~~----~~~~~~~~~~~~l~H~~~~~~~~-~~~~~~~~~ 273 (288)
+. +.+++ ..+++++++|+...... ++..+.+++
T Consensus 211 v~~~i~~~~~~-~~grvii~~fasnv~R~q~il~~a~~~ 248 (555)
T 3zq4_A 211 VGESIHDIFRK-VDGRIIFATFASNIHRLQQVIEAAVQN 248 (555)
T ss_dssp HHHHHHHHHHH-CCSCEEEECCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-CCCEEEEEEChhHHHHHHHHHHHHHHH
Confidence 33 23333 25799999999643322 334444444
No 21
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.82 E-value=9.8e-20 Score=178.56 Aligned_cols=173 Identities=10% Similarity=0.082 Sum_probs=117.6
Q ss_pred eEEEEeee-cCceeEEEeC--CceEEEeCCCCCcc-------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCC
Q 023022 20 YKVEGLSI-AGHETCIIFP--SLDLAFDIGRCPSR-------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRM 83 (288)
Q Consensus 20 ~~v~g~~~-~~~~s~~~i~--~~~iLiD~G~~~~~-------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~ 83 (288)
+++++.+. ....+|++++ +..||||||..... ..+|++|||||+|.||++|+++|+..+.....
T Consensus 3 ~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~ 82 (717)
T 2i7x_A 3 YKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFI 82 (717)
T ss_dssp EEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHH
T ss_pred EEEEeecCCCCCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhccc
Confidence 56665442 3456677765 56999999977510 12689999999999999999999864210001
Q ss_pred CCCEEeCCcchHHHHHHHHHhhhhcCC--CCC-----c--------eEEEEcCCCCeEEe---cCCeEEEEEEcCCcCCc
Q 023022 84 KPPTIIVPSCIKEDVEQLFEVHRRMDH--SEL-----N--------HTLVGLDVGEEFCM---RKDLFVKAFKTYHVIQS 145 (288)
Q Consensus 84 ~~~~i~~p~~~~~~l~~~~~~~~~~~~--~~~-----~--------~~~~~l~~g~~~~i---~~~~~i~~~~~~H~~~~ 145 (288)
..++||+++.+...+...+........ ..+ . ..++.+.+++++.+ .++++|++++++|++++
T Consensus 83 ~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~Gs 162 (717)
T 2i7x_A 83 SRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGG 162 (717)
T ss_dssp HTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTC
T ss_pred CCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCCc
Confidence 246799998877665543322110000 000 0 13577889999999 34999999999999999
Q ss_pred ceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCC--ccccc---------cccccCCCCEEE
Q 023022 146 QGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSD--FIVDE---------ANIDVLRARILV 214 (288)
Q Consensus 146 ~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~--~~~~~---------~~~~~~~~d~li 214 (288)
++|.|..+. .+++|+||+... .++.. ....+.++|+||
T Consensus 163 ~~~~I~~~~-------------------------------~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI 211 (717)
T 2i7x_A 163 SIWCISTYS-------------------------------EKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAII 211 (717)
T ss_dssp EEEEEECSS-------------------------------CEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEE
T ss_pred EEEEEEeCC-------------------------------CEEEEECCCCCCcccccCccccccccchhHHhccCCcEEE
Confidence 999997542 479999999762 22211 112356899999
Q ss_pred EecccCCCC
Q 023022 215 MESTYVDDS 223 (288)
Q Consensus 215 ~E~t~~~~~ 223 (288)
+||||....
T Consensus 212 ~EsTy~~~~ 220 (717)
T 2i7x_A 212 TTLDRFGSS 220 (717)
T ss_dssp ECCSCCCCS
T ss_pred EcCCCCCCC
Confidence 999998754
No 22
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.79 E-value=3.3e-18 Score=155.67 Aligned_cols=149 Identities=16% Similarity=0.231 Sum_probs=109.1
Q ss_pred CCceEEEeCCCCCccccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceE
Q 023022 37 PSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHT 116 (288)
Q Consensus 37 ~~~~iLiD~G~~~~~~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (288)
.+..++||+... ....+|++|||||+|.||++|++. ....+||+++.+.+.+...+. . ....
T Consensus 35 pG~~ilVD~f~~-~~~~~IdaI~lTH~H~DHiggl~~---------~~~~pIy~s~~t~~ll~~~l~------~--~~~~ 96 (367)
T 4b87_A 35 PGTGFTVDAFQY-GVVEGCTAYFLTHFHSDHYAGLSK---------HFTFPVYCSEITGNLLKNKLH------V--QEQY 96 (367)
T ss_dssp TTSSEEESCCSS-SSCTTCCEEECCCCCHHHHTTCST---------TCCSCEEECHHHHHHHHHHSC------C--CGGG
T ss_pred CCCeEEEeCCCc-CCccCCcEEEECcChHHHhCCccc---------ccCCcEEECHHHHHHHHHHhc------c--ccce
Confidence 466899998754 234579999999999999999982 124569999988877764331 1 1124
Q ss_pred EEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCC
Q 023022 117 LVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMS 196 (288)
Q Consensus 117 ~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~ 196 (288)
+++++.++++.++ +++|++++++|.+++++|.+..++ | .+++|+||+..
T Consensus 97 ~~~l~~g~~~~ig-~~~v~~~~agH~~gs~~~~i~~~~---------------------g---------~~il~tGD~~~ 145 (367)
T 4b87_A 97 IHPLPLDTECIVN-GVKVVLLDANHCPGAVMILFYLPN---------------------G---------TVILHTGDFRA 145 (367)
T ss_dssp EEECCBTSCEEET-TEEEEEEECSSSTTCEEEEEECTT---------------------S---------CEEEECCSCCC
T ss_pred EEEeCCCCEEEEC-CEEEEEEeCCCcCCcEEEEEEcCC---------------------C---------cEEEEecCccc
Confidence 6788999999995 999999999999999999997532 3 46999999998
Q ss_pred CccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHH
Q 023022 197 DFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVE 242 (288)
Q Consensus 197 ~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~ 242 (288)
............++|+||+||||.+.. ..|.+.+++.+
T Consensus 146 ~~~~~~~~l~~~~~D~Li~EsTy~~~~--------~~~ps~~~~~~ 183 (367)
T 4b87_A 146 DPSMERSLLADQKVHMLYLDTTYCSPE--------YTFPSQQEVIR 183 (367)
T ss_dssp CGGGGGSGGGTSCCCEEEECCTTCSTT--------CCCCCHHHHHH
T ss_pred CcccchhhhccCCCCEEEEecccCCCC--------CCCCCHHHHHH
Confidence 432211111235899999999999754 34666655544
No 23
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.78 E-value=1.9e-18 Score=146.65 Aligned_cols=160 Identities=15% Similarity=0.163 Sum_probs=107.9
Q ss_pred eeEEEeC--CceEEEeCCCCCc----cccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHh
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS----RALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEV 104 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~----~~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~ 104 (288)
++|++++ +..||||||.+.. ...++|+|||||.|.||++ ++.+. ....++
T Consensus 20 ~~~~li~~~~~~iLiD~g~~~~~~~~~~~~id~VliTH~H~DH~~-~~~l~--------~~~~vi--------------- 75 (220)
T 1vjn_A 20 HACFALEMEGKTIVTDPFDESVGYPIPNVTADVVTESHQHFDHNA-HHLVK--------GNFRVI--------------- 75 (220)
T ss_dssp TTEEEEEETTEEEEESCCC-----CCCCCBCSEEECSSCC---CG-GGGCB--------SSCEEE---------------
T ss_pred CCEEEEEECCEEEEEcCCCCcCCCCcCCCCcCEEEECCCCCCCCC-chHhc--------CCCEEE---------------
Confidence 4556664 5699999997631 1246999999999999987 55321 112232
Q ss_pred hhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCC-------cceEEEEEeccccchhhcCCChHHHHHHHhcCc
Q 023022 105 HRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQ-------SQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGT 177 (288)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~-------~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~ 177 (288)
..+..+.++ +++|+++++.|+.+ ++||+++.+ |
T Consensus 76 ----------------~~~g~~~~~-~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~----------------------g- 115 (220)
T 1vjn_A 76 ----------------DRPGAYTVN-GVKIKGVETFHDPSHGRERGKNIVFVFEGE----------------------G- 115 (220)
T ss_dssp ----------------CSSEEEEET-TEEEEEEEEEEC-------CEEEEEEEEET----------------------T-
T ss_pred ----------------cCCCeEEEC-CEEEEEEeeecCCCCCccCCCcEEEEEEEC----------------------C-
Confidence 112256774 89999999999863 589999754 3
Q ss_pred eecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEec
Q 023022 178 EITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHF 257 (288)
Q Consensus 178 ~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~ 257 (288)
.+++|+||+.+.... .....+.++|++++|+.. ..|++++++.+++++.++++++++|+
T Consensus 116 --------~~i~~~GDt~~~~~~-~~~~~~~~~Dvlil~~g~------------~~h~~~~~a~~~~~~~~~k~vi~~H~ 174 (220)
T 1vjn_A 116 --------IKVCHLGDLGHVLTP-AQVEEIGEIDVLLVPVGG------------TYTIGPKEAKEVADLLNAKVIIPMHY 174 (220)
T ss_dssp --------EEEEECTTCCSCCCH-HHHHHHCCCSEEEEECCS------------SSSCCHHHHHHHHHHTTCSEEEEESC
T ss_pred --------eEEEEeCCCCCcchH-HHHHhhCCCCEEEEcCCC------------cCcCCHHHHHHHHHhcCCCEEEEEec
Confidence 479999999974211 122345689999999831 35999999999999999999999999
Q ss_pred cCCCChhH---HHHHHHhCCC
Q 023022 258 SARHKVDE---IRRAVDAVPA 275 (288)
Q Consensus 258 ~~~~~~~~---~~~~~~~~~~ 275 (288)
++.+.... ..++++.+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~ 195 (220)
T 1vjn_A 175 KTKYLKFNLLPVDDFLKLFDS 195 (220)
T ss_dssp CCSSCCTTCCCTHHHHTTSSC
T ss_pred ccccccCCchhHHHHHHHHHh
Confidence 99753222 3445444433
No 24
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.77 E-value=2.3e-18 Score=154.90 Aligned_cols=183 Identities=17% Similarity=0.210 Sum_probs=126.8
Q ss_pred EEeCCceEEEeCCCCCccccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCC
Q 023022 34 IIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSEL 113 (288)
Q Consensus 34 ~~i~~~~iLiD~G~~~~~~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~ 113 (288)
..+.+..+.||+-.. ....+|++|||||+|.||++|++.++ ..+||+++.+...+...+... .
T Consensus 5 ~~i~g~~i~vD~f~~-~~~~~i~ai~lTH~H~DHiggl~~l~---------~~pVy~s~~t~~ll~~~l~~~------~- 67 (336)
T 3zdk_A 5 VLIPHTPIAVDFWSL-RRAGTARLFFLSHMHSDHTVGLSSTW---------ARPLYCSPITAHLLHRHLQVS------K- 67 (336)
T ss_dssp EECTTSSEEESCCCH-HHHCSSCEEECCCCCGGGSTTCSTTC---------CSCEEECHHHHHHHHHHHCCC------T-
T ss_pred eEeCCCCEeecCCcc-cCCCCCCEEEECCChHHHHCchHHHc---------CCCEEecHHHHHHHHHhhhhc------c-
Confidence 445566888887643 12357999999999999999999762 357999999988887654211 1
Q ss_pred ceEEEEcCCCCeEEe-----c-CCeEEEEEEcCCcCCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCe
Q 023022 114 NHTLVGLDVGEEFCM-----R-KDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPE 187 (288)
Q Consensus 114 ~~~~~~l~~g~~~~i-----~-~~~~i~~~~~~H~~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~ 187 (288)
..+.+++.++.+.+ + ++++|++++++|.+++++|.++.++ ++
T Consensus 68 -~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~-------------------------------~~ 115 (336)
T 3zdk_A 68 -QWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYF-------------------------------GT 115 (336)
T ss_dssp -TTEEECCTTSEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETT-------------------------------EE
T ss_pred -cceEecCCCCeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCC-------------------------------ce
Confidence 13456777777655 1 4899999999999999999997642 47
Q ss_pred EEEecCCCCCcc-cc-ccccccCCCCEEEEecccCCCCCcHHHHhhcCCCc----HHHHHHHHHHcCCCeEEEEeccCCC
Q 023022 188 VAFTGDTMSDFI-VD-EANIDVLRARILVMESTYVDDSTTVEQARDYGHTH----LSEIVEYAEKFENKAILLIHFSARH 261 (288)
Q Consensus 188 i~y~gD~~~~~~-~~-~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~----~~~~~~~~~~~~~~~~~l~H~~~~~ 261 (288)
++|+||++.+.- .. ......+++|+|++||||.+... .+.+ .+++.+++++...+++++++|+-..
T Consensus 116 i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~--------~~pse~~v~~~l~~~i~~~~~g~vii~~f~vgR 187 (336)
T 3zdk_A 116 ILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPAL--------VLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGK 187 (336)
T ss_dssp EEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTC--------CCCCHHHHHHHHHHHHHTCTTSEEEEEECSSSC
T ss_pred EEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCC--------CCCCHHHHHHHHHHHHHhCCCCcEEEeecchHH
Confidence 999999987421 11 11123578999999999998641 2233 3445666666555699999996543
Q ss_pred ChhHHHHHHHhCC
Q 023022 262 KVDEIRRAVDAVP 274 (288)
Q Consensus 262 ~~~~~~~~~~~~~ 274 (288)
. .++..+.+++.
T Consensus 188 ~-q~i~~~a~~~g 199 (336)
T 3zdk_A 188 E-SLLEQLALEFQ 199 (336)
T ss_dssp H-HHHHHHHHHHT
T ss_pred H-HHHHHHHHHcC
Confidence 3 34555544443
No 25
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.65 E-value=3.7e-15 Score=128.84 Aligned_cols=170 Identities=19% Similarity=0.255 Sum_probs=113.0
Q ss_pred CceeEEEeC--CceEEEeCCCCCcc-----ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHH
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPSR-----ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQL 101 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~~-----~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~ 101 (288)
+..+|+++. +..+|||||..... ..+|++|++||.|.||++|+..+...+ ..+||+++...+.+...
T Consensus 18 ~~~~~~li~~~~~~iLiD~G~~~~~~~l~~~~~i~~vi~TH~H~DH~gg~~~l~~~~------~~~i~~~~~~~~~l~~~ 91 (261)
T 3adr_A 18 EIATVYVMCGEKLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQVY------KAKVLVKSGFKKYLTSE 91 (261)
T ss_dssp GGSEEEEEECSSCEEEECCCCTTCCCCCTTCSCCCEEECSCCSGGGTTTHHHHHHHS------CCEEEEETTCTHHHHSH
T ss_pred CceEEEEEEcCCcEEEEeCCCCCChhhcCCCCCCcEEEECCCCccccCCHHHHHHHh------CCeEEECHHHHHHhcCc
Confidence 345677775 46899999986531 236899999999999999999987643 35788877655444310
Q ss_pred ------H----Hhh----hhcCC--CCCc-eEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEeccccchhhcC
Q 023022 102 ------F----EVH----RRMDH--SELN-HTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSVKQKLKQEYLG 163 (288)
Q Consensus 102 ------~----~~~----~~~~~--~~~~-~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~~~~~~~~~~g 163 (288)
. ... ..+.. ...+ .++..+++|+.+.++ +++++++++ +|++++++|.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pGHt~~~~~~~~------------- 157 (261)
T 3adr_A 92 DGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLG-GYRMRLIYTPGHARHHMSVLV------------- 157 (261)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECS-SSEEEEEECTTSCTTCEEEEE-------------
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEEC-CEEEEEEECCCCCCccEEEEE-------------
Confidence 0 000 00110 1111 246778899999995 999999998 69999999965
Q ss_pred CChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHH
Q 023022 164 LPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEY 243 (288)
Q Consensus 164 ~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~ 243 (288)
.+++|+||+..... ...+..+.... . .+..+.++++.
T Consensus 158 ----------------------~~~lf~GD~~~~~~----------~~~~~~~~~~~-~----------~~~~~~~sl~~ 194 (261)
T 3adr_A 158 ----------------------DDFLFTGDSAGAYF----------NGVVIPTTPPV-I----------DYKMYMESLKR 194 (261)
T ss_dssp ----------------------TTEEEEETSSCEEE----------TTEEECCCCSC-C----------CHHHHHHHHHH
T ss_pred ----------------------CCEEEEcCcccccc----------cccccCCCCCC-C----------CHHHHHHHHHH
Confidence 24999999976311 11222221111 1 12345677777
Q ss_pred HHHcCCCeEEEEeccCCC
Q 023022 244 AEKFENKAILLIHFSARH 261 (288)
Q Consensus 244 ~~~~~~~~~~l~H~~~~~ 261 (288)
+.+.+++.+++.|.++..
T Consensus 195 l~~l~~~~v~~~H~~~~~ 212 (261)
T 3adr_A 195 QIELKPKVVGFAHGGLVS 212 (261)
T ss_dssp HHHTCCSEEEETTTEEEC
T ss_pred HHcCCCCEEEeCCCCccC
Confidence 888899999999999865
No 26
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.61 E-value=1.8e-15 Score=133.07 Aligned_cols=208 Identities=16% Similarity=0.122 Sum_probs=124.2
Q ss_pred cCceeEEEeC--CceEEEeCCCCCc--c---c-----cCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchH
Q 023022 28 AGHETCIIFP--SLDLAFDIGRCPS--R---A-----LSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIK 95 (288)
Q Consensus 28 ~~~~s~~~i~--~~~iLiD~G~~~~--~---~-----~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~ 95 (288)
+.+++|++++ +..+|||||.+.. . . .+|++|++||.|+||++|++.+...+ ..+++|+++...
T Consensus 30 ~~~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~-----~~~~v~~~~~~~ 104 (284)
T 2p4z_A 30 AEHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERN-----PEVKIYTHKEIL 104 (284)
T ss_dssp BCSSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHC-----TTCEEEEEGGGG
T ss_pred cCCEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHc-----CCCceecCHHHH
Confidence 4556677775 5689999998752 1 1 14899999999999999999887532 246788876653
Q ss_pred H-HHHHHHHhhhhcCC--CC----CceEEEEcCCCCeEEecCC-eEEEEEEcCCcCCc-c--eEEEEEeccccchhhcCC
Q 023022 96 E-DVEQLFEVHRRMDH--SE----LNHTLVGLDVGEEFCMRKD-LFVKAFKTYHVIQS-Q--GYVVYSVKQKLKQEYLGL 164 (288)
Q Consensus 96 ~-~l~~~~~~~~~~~~--~~----~~~~~~~l~~g~~~~i~~~-~~i~~~~~~H~~~~-~--g~~i~~~~~~~~~~~~g~ 164 (288)
+ .+.........+.. .. ...++..++ +++.+.++ +.+..+|..|+.++ . +|++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~~gi~~i~~~~~~h~~~~~~g~~~~~~------------- 169 (284)
T 2p4z_A 105 NKKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID--KDAEIEEGFYVITNTDITYDNEFTTKNFFVEK------------- 169 (284)
T ss_dssp SCEEEECSSSCEEECSCCHHHHHHHGGGEEEES--SCEEEETTEEEECSCCCCSCCHHHHTTEEEEE-------------
T ss_pred HHHhccCccccccccccccchhhhcCceEEEeC--CCeEEeCCEEEEeeeCCccccccCCCceEEEc-------------
Confidence 2 00000000000000 00 011334443 23556545 55556777776543 2 36663
Q ss_pred ChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCC--EEEEecccCCCCCcHHHH------------h
Q 023022 165 PGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRAR--ILVMESTYVDDSTTVEQA------------R 230 (288)
Q Consensus 165 ~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d--~li~E~t~~~~~~~~~~~------------~ 230 (288)
.+.|++|+-+ +.....++++| +|+.+|++..-......+ .
T Consensus 170 ----------------------~~~y~~D~~~----de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~i 223 (284)
T 2p4z_A 170 ----------------------EGKRIPDKFL----DEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLI 223 (284)
T ss_dssp ----------------------TTEEEECCCT----TCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEE
T ss_pred ----------------------CCCEecCCCC----CceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEE
Confidence 1578999533 22233567789 778888755311000000 1
Q ss_pred hcCCC------cHHHHHHHHHHcCCCeEEEEeccCCCChhHHHHHHHhCCCcccceeeecccCC
Q 023022 231 DYGHT------HLSEIVEYAEKFENKAILLIHFSARHKVDEIRRAVDAVPAPLAGRVFALTEGF 288 (288)
Q Consensus 231 ~~~H~------~~~~~~~~~~~~~~~~~~l~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 288 (288)
...|+ +++++++++++.++++++++|+++..+. .++.+.++ ..|.+|.+|.
T Consensus 224 gg~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H~~~~~~~---~~~~~~~~----~~v~~a~~G~ 280 (284)
T 2p4z_A 224 GGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGIDEY---GFLKSVLK----DKISYLTTSS 280 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHHHHTTBCCEEECGGGCHHHH---HHHHHHHG----GGEEECCTTC
T ss_pred EcccCCCCCHHHHHHHHHHHHcCCCCEEEeeCcCcHHHH---HHHHHHhC----CCEEEcCCCc
Confidence 25599 9999999999999999999999996543 23333343 4577777773
No 27
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.55 E-value=1.8e-14 Score=120.60 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=78.7
Q ss_pred eeEEEeC----CceEEEeCCCCCccc--------cCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHH
Q 023022 31 ETCIIFP----SLDLAFDIGRCPSRA--------LSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDV 98 (288)
Q Consensus 31 ~s~~~i~----~~~iLiD~G~~~~~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l 98 (288)
.+|+++. +..+|||||...... .++++|++||.|.||++|+..+.... +++||+++...+.+
T Consensus 13 ~n~~li~~~~~~~~iLiD~G~~~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~~~~~ 86 (210)
T 2xf4_A 13 QNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHY------GVPVIGPEKEDEFW 86 (210)
T ss_dssp EEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHH------TCCEECCCGGGHHH
T ss_pred cEEEEEEecCCCcEEEEcCCCCHHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHc------CCcEEEecchHHHH
Confidence 5567763 458999999654221 35899999999999999999987643 25689988776655
Q ss_pred HHHHHhhh-hcCCC--CCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEE
Q 023022 99 EQLFEVHR-RMDHS--ELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVY 151 (288)
Q Consensus 99 ~~~~~~~~-~~~~~--~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~ 151 (288)
........ .+... ........+++|+.+.++ +.+++++++ +|++++++|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pgHt~g~~~~~~~ 142 (210)
T 2xf4_A 87 LQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVG-NVTLQVLHCPGHTPGHVVFFDE 142 (210)
T ss_dssp HHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEET-TEEEEEEECCSSSTTCEEEEET
T ss_pred hccchhhhhhcCCcccCCCCCceEECCCCEEEEC-CeEEEEEECCCCCCCcEEEEeC
Confidence 43221110 11110 000123457789999995 899999987 799999999983
No 28
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.52 E-value=7.3e-14 Score=122.77 Aligned_cols=115 Identities=14% Similarity=0.152 Sum_probs=80.5
Q ss_pred eeEEEeC--CceEEEeCCCCCc-----c---c--c---CcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS-----R---A--L---SQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIK 95 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~-----~---~--~---~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~ 95 (288)
.+|+++. ++.+|||||.... . . . +|++||+||.|.||++|+..+.... .++||+++...
T Consensus 55 ~n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~~ 128 (294)
T 3m8t_A 55 IAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET------GAQLVAGERDK 128 (294)
T ss_dssp SCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH------CCEEEEEGGGH
T ss_pred eEEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc------CCEEEEChHHH
Confidence 4455554 5699999997421 0 0 1 4899999999999999999997632 35799998887
Q ss_pred HHHHHHHHhhh----hcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEe
Q 023022 96 EDVEQLFEVHR----RMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSV 153 (288)
Q Consensus 96 ~~l~~~~~~~~----~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~ 153 (288)
+.+........ ....... .....+..|+.+.++ +.+|+++++ +|++++++|++..+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~g-~~~i~~~~~pgHt~g~~~~~~~~~ 189 (294)
T 3m8t_A 129 PLLEGGYYPGDEKNEDLAFPAV-KVDRAVKEGDRVTLG-DTTLTAHATPGHSPGCTSWEMTVK 189 (294)
T ss_dssp HHHHHTCBTTBTTCGGGCCCCC-CCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEEE
T ss_pred HHHhcccccCccccccCCCCCC-CCceEeCCCCEEEeC-CEEEEEEeCCCCCccCEEEEEEcc
Confidence 77654311000 0000000 123567889999995 999999987 79999999999764
No 29
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.48 E-value=4e-13 Score=113.02 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=78.2
Q ss_pred eeEEEeC--CceEEEeCCCCCcc------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPSR------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~~------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
++|+++. +..+|||||..... ..+|++||+||.|.||++|+..+.+ . .++||+++...+
T Consensus 31 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~~~ 103 (219)
T 3l6n_A 31 ANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN-K------GIKTYATAKTNE 103 (219)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH-T------TCEEEECHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh-C------CCEEEEcHHHHH
Confidence 5666664 56999999975421 1368999999999999999999864 1 468999987766
Q ss_pred HHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEE--cCCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFK--TYHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~--~~H~~~~~g~~i~ 151 (288)
.+... ........+..++.+.++ +.++++++ .+|++++++|++.
T Consensus 104 ~~~~~----------~~~~~~~~~~~g~~~~~g-~~~i~~~~~~pgHt~g~~~~~~~ 149 (219)
T 3l6n_A 104 FLKKD----------GKATSTEIIKTGKPYRIG-GEEFVVDFLGEGHTADNVVVWFP 149 (219)
T ss_dssp HHHHT----------TCCCCSEECCTTSEEEET-TEEEEEECCCCSSSSSCCEEEET
T ss_pred HHHhc----------CCCCCcEecCCCCEEEEC-CEEEEEEeCCCCCCCCCEEEEEC
Confidence 65431 111234678889999995 99999987 4999999999984
No 30
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.47 E-value=5e-13 Score=118.77 Aligned_cols=173 Identities=10% Similarity=0.095 Sum_probs=110.7
Q ss_pred CceeEEEeC--CceEEEeCCCCCcc-------c-----c---CcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCC
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPSR-------A-----L---SQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVP 91 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~~-------~-----~---~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p 91 (288)
+..+|+++. ++.+|||||.+... . . +|++|++||.|.||++|+..+... .++||++
T Consensus 20 ~~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~-------~~~v~~~ 92 (317)
T 2zo4_A 20 KTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL-------GARVFLH 92 (317)
T ss_dssp CEEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT-------TCEEEEE
T ss_pred CcEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC-------CCEEEEc
Confidence 456777775 46899999987521 1 1 389999999999999999988752 4678988
Q ss_pred cchHHHHHHHHHh-----------hh--hcCC----------------CCCceEEEEcCCCCeEEecCCeEEEEEEc-CC
Q 023022 92 SCIKEDVEQLFEV-----------HR--RMDH----------------SELNHTLVGLDVGEEFCMRKDLFVKAFKT-YH 141 (288)
Q Consensus 92 ~~~~~~l~~~~~~-----------~~--~~~~----------------~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H 141 (288)
+...+.+...... .. .... .........+.+|+.+.++ +.+++++++ +|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-g~~~~~i~tpGH 171 (317)
T 2zo4_A 93 EEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVA-GKRLRVLWTPGH 171 (317)
T ss_dssp GGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEET-TEEEEEEECCSS
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeC-CceEEEEECCCC
Confidence 7765554432110 00 0000 0011234678889999995 999999998 89
Q ss_pred cCCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCC
Q 023022 142 VIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVD 221 (288)
Q Consensus 142 ~~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~ 221 (288)
++++++|++.. .+++|+||+-...... +... ....+.+
T Consensus 172 t~g~~~~~~~~---------------------------------~~~lf~GD~~~~~~~~-------~~~~--~~~~~~~ 209 (317)
T 2zo4_A 172 ADGHAAFYLEE---------------------------------EGVLLAGDALLEKVSP-------NVGL--WAYTREN 209 (317)
T ss_dssp STTCEEEEETT---------------------------------TTEEEEETSCCSSSCC-------CCCC--CTTSCSC
T ss_pred CcccEEEEeCC---------------------------------CCEEEECCEecCCCCC-------CCcc--cCCCCCc
Confidence 99999998721 3599999997631110 0000 0000111
Q ss_pred CCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccCCCC
Q 023022 222 DSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSARHK 262 (288)
Q Consensus 222 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~~~~ 262 (288)
. -..+.++++..++.+++.++..|-.+-.+
T Consensus 210 -~----------~~~~~~sl~~l~~l~~~~v~pgHg~~~~~ 239 (317)
T 2zo4_A 210 -P----------LKDFLRSLDRLADLGARVAYAGHFGPIAD 239 (317)
T ss_dssp -H----------HHHHHHHHHHHHTSCCSEEEESSSSCBSC
T ss_pred -h----------HHHHHHHHHHHhcCCCCEEECCCCCccCC
Confidence 1 01344556666677889999999888554
No 31
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.46 E-value=1.4e-13 Score=119.50 Aligned_cols=108 Identities=9% Similarity=0.037 Sum_probs=81.1
Q ss_pred ceeEEEeC-CceEEEeCCCCCc---------c---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 30 HETCIIFP-SLDLAFDIGRCPS---------R---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 30 ~~s~~~i~-~~~iLiD~G~~~~---------~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
..+|+++. ++.+|||||.... + ..+|++|++||.|.||++|+..+.+.. ...+||+++....
T Consensus 42 ~~N~yli~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~~ 116 (262)
T 3hnn_A 42 TSNSYVIEGDKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELA-----PQITFVCSLPAAG 116 (262)
T ss_dssp EEEEEEEESSSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHC-----TTCEEEECHHHHH
T ss_pred EEEEEEEECCCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHHC-----CCCEEEECHHHHH
Confidence 34677776 5699999997521 0 135899999999999999999997632 2468999988877
Q ss_pred HHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-C-CcCCcceEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-Y-HVIQSQGYVV 150 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~-H~~~~~g~~i 150 (288)
.+...+. . .....+.+++|+++.++++.+++++++ + |+++++.+++
T Consensus 117 ~l~~~~~------~--~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~ 164 (262)
T 3hnn_A 117 DLRAAFP------D--DNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD 164 (262)
T ss_dssp HHHHHSS------S--SCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE
T ss_pred HHHHHhC------C--CCCceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe
Confidence 6654321 1 123578889999999954788888887 5 9999988876
No 32
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.46 E-value=2.2e-13 Score=120.41 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=81.9
Q ss_pred cCceeEEEeC----CceEEEeCCCCCc------------c--------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCC
Q 023022 28 AGHETCIIFP----SLDLAFDIGRCPS------------R--------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRM 83 (288)
Q Consensus 28 ~~~~s~~~i~----~~~iLiD~G~~~~------------~--------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~ 83 (288)
+..++||++. +..+|||||.... . .++|++||+||.|.||++|+..|....
T Consensus 14 ~~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~----- 88 (298)
T 4efz_A 14 ATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRV----- 88 (298)
T ss_dssp TTCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHHHHHH-----
T ss_pred CcccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHHHHHh-----
Confidence 3446677773 3489999996311 1 136999999999999999999997644
Q ss_pred CCCEEeCCcchHHHHHHHHHhhhhcC---CCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEe
Q 023022 84 KPPTIIVPSCIKEDVEQLFEVHRRMD---HSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSV 153 (288)
Q Consensus 84 ~~~~i~~p~~~~~~l~~~~~~~~~~~---~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~ 153 (288)
..+|++++.....+........... ...... ...+.+|+.+.++ +.+++++.+ +|++++++|++...
T Consensus 89 -~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~l~~g-~~~i~vi~tPGHT~g~~~~~~~~~ 159 (298)
T 4efz_A 89 -GGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQF-DRLLDDGDTLALG-ALSIRAMHTPGHTPACMTYVVTEA 159 (298)
T ss_dssp -CCEEEEETTHHHHHHHHHHHTTCCTTSCSSSTTS-SEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEET
T ss_pred -CCcEEEChhHHHHHHHHHHhcCCcccccccccCC-CEEeCCCCEEEEC-CEEEEEEECCCCCcccEEEEECCC
Confidence 3568888776655543222211100 011111 2568899999995 999999998 79999999999753
No 33
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.46 E-value=1.7e-13 Score=114.51 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=73.1
Q ss_pred ceeEEEeC--CceEEEeCCCCCcc--------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHH
Q 023022 30 HETCIIFP--SLDLAFDIGRCPSR--------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVE 99 (288)
Q Consensus 30 ~~s~~~i~--~~~iLiD~G~~~~~--------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~ 99 (288)
..+|+++. +..+|||||..... ..+|++|++||.|.||++|+..+.... ..+||+++...+.+.
T Consensus 12 ~~n~~li~~~~~~iliD~G~~~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~------~~~v~~~~~~~~~~~ 85 (207)
T 2zwr_A 12 QENAYLVETGEGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEAL------DLPVYLHPLDLPLYE 85 (207)
T ss_dssp TEEEEEEEETTEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHH------CCCEEECGGGHHHHH
T ss_pred ccEEEEEEeCCcEEEEeCCCCHHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHh------CCcEEECHHHHHHHh
Confidence 35677775 46999999975421 135999999999999999999887633 356999998877776
Q ss_pred HHHHhhhhcC--CCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEE
Q 023022 100 QLFEVHRRMD--HSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVY 151 (288)
Q Consensus 100 ~~~~~~~~~~--~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~ 151 (288)
........+. ..........+.+|+.+. + ++++++ +|++++++|++.
T Consensus 86 ~~~~~~~~~g~~~~~~~~~~~~~~~g~~i~---~--~~~~~~pGHt~g~~~~~~~ 135 (207)
T 2zwr_A 86 GADLAARAWGLAIPKPPLPVRPLEEGMRLF---G--FQVLHLPGHSPGHVAFYDP 135 (207)
T ss_dssp THHHHHHHTTCCCCCCCSCCEECCTTCEET---T--EEEEECCSSSTTCEEEEET
T ss_pred CchhhhhhcCCCCCcCCCCceEeCCCCEEE---E--EEEEeCCCCCCCcEEEEEC
Confidence 4322110011 111111234567777653 3 555555 799999999984
No 34
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.45 E-value=2e-13 Score=118.08 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=74.9
Q ss_pred CceeEEEeC----CceEEEeCCCCCc-------cccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHH
Q 023022 29 GHETCIIFP----SLDLAFDIGRCPS-------RALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKED 97 (288)
Q Consensus 29 ~~~s~~~i~----~~~iLiD~G~~~~-------~~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~ 97 (288)
+.++||++. +..+|||||.... ...+|++|++||.|.||++|+..|.... +.+||+++.....
T Consensus 10 ~~n~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~------~~~v~~~~~~~~~ 83 (254)
T 1xm8_A 10 KDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY------GAKVIGSAMDKDR 83 (254)
T ss_dssp TTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHH------CCEEEEEGGGGGG
T ss_pred CCeEEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHc------CCeEEEchhhhhc
Confidence 445567664 2489999995321 1246999999999999999999987643 3578888654321
Q ss_pred HHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEE
Q 023022 98 VEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVY 151 (288)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~ 151 (288)
+ . .....+.+|+.+.++ +.+++++++ +|++++++|++.
T Consensus 84 ~----------~-----~~~~~~~~g~~~~lg-~~~~~vi~tPGHt~g~~~~~~~ 122 (254)
T 1xm8_A 84 I----------P-----GIDMALKDGDKWMFA-GHEVHVMDTPGHTKGHISLYFP 122 (254)
T ss_dssp S----------T-----TEEEEECTTCEEEET-TEEEEEEECCSSSSSCEEEEEG
T ss_pred C----------C-----CCceeeCCCCEEEEC-CEEEEEEECCCCCCCcEEEEEC
Confidence 1 0 124567889999995 899999987 899999999984
No 35
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.45 E-value=2.3e-13 Score=118.53 Aligned_cols=170 Identities=17% Similarity=0.141 Sum_probs=107.6
Q ss_pred eeEEEeC--CceEEEeCCCCCcc---------------------------c-----c---CcCEEEEecCChhhhCcHHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPSR---------------------------A-----L---SQNFLFISHAHMDHIGGLPM 73 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~~---------------------------~-----~---~i~~I~iTH~H~DH~~gl~~ 73 (288)
.+|+++. +..+|||||.+... . + +|++|++||.|.||++|+..
T Consensus 43 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~ 122 (276)
T 2r2d_A 43 VSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEY 122 (276)
T ss_dssp EEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGG
T ss_pred eEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhh
Confidence 5677775 56999999976531 1 1 48999999999999999986
Q ss_pred HHHHhCCCCCCCCEEeCCcchHHHHHHHHHhh---hhc-----CC-CCCceEEEEcC-CCCeEEecCCeEEEEE-EcCCc
Q 023022 74 YVATRGLYRMKPPTIIVPSCIKEDVEQLFEVH---RRM-----DH-SELNHTLVGLD-VGEEFCMRKDLFVKAF-KTYHV 142 (288)
Q Consensus 74 ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~---~~~-----~~-~~~~~~~~~l~-~g~~~~i~~~~~i~~~-~~~H~ 142 (288)
| ...+||+++...+.+....... ..+ .. .....++..++ .++.+.+++++++... | +|+
T Consensus 123 ~---------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt 192 (276)
T 2r2d_A 123 F---------GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHA 192 (276)
T ss_dssp C---------SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSS
T ss_pred C---------CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCC
Confidence 5 2467999887766554332210 000 00 00023466777 4888999667888888 6 999
Q ss_pred CCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccc-cCCCCEEEEecccCC
Q 023022 143 IQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANID-VLRARILVMESTYVD 221 (288)
Q Consensus 143 ~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~-~~~~d~li~E~t~~~ 221 (288)
+++++|++..++ + .+++|+||+.+... .... ...++ +..
T Consensus 193 ~g~~~~~~~~~~---------------------~---------~~vl~~GD~~~~~~---~~~~~~~~~~-------~~~ 232 (276)
T 2r2d_A 193 SGMLGLAVRLEK---------------------Q---------PGFLLVSDACYTAT---NYGPPARRAG-------VLH 232 (276)
T ss_dssp SSEEEEEEECSS---------------------S---------CEEEEEETTSCCHH---HHSSSCCCCS-------SCS
T ss_pred ceeEEEEEEcCC---------------------C---------ceEEEEechhhhHH---HhcccCCCCc-------ccc
Confidence 999999997431 1 36999999987321 0000 01111 111
Q ss_pred CCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEecc
Q 023022 222 DSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFS 258 (288)
Q Consensus 222 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~ 258 (288)
+ ....|.+++.+.+++.+.. ..+++.|..
T Consensus 233 -d------~~~~~~sl~~l~~l~~~~~-~~v~~~H~~ 261 (276)
T 2r2d_A 233 -D------TIGYDRTVSHIRQYAESRS-LTVLFGHDR 261 (276)
T ss_dssp -C------HHHHHHHHHHHHHHHHHTT-CEEEESSCH
T ss_pred -C------HHHHHHHHHHHHHHHhcCC-CEEEeCCCH
Confidence 1 1123567777777766544 489999954
No 36
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.45 E-value=1.7e-12 Score=114.04 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=78.8
Q ss_pred CceeEEEeC--CceEEEeCCCCCc--------c-----ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPS--------R-----ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~--------~-----~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
..++|+++. ++.+|||||.... . ..+|++||+||.|.||++|+..|...... ...+.+++++.
T Consensus 30 ~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~--~~~~~v~~~~~ 107 (289)
T 4ad9_A 30 QGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINN--DTTYCIKKLPR 107 (289)
T ss_dssp TCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHSCC--SSCCCEEECCC
T ss_pred CceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhhcc--CCCceEEecCC
Confidence 346788885 4699999996531 0 13699999999999999999999875421 23445666543
Q ss_pred hHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEE
Q 023022 94 IKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVY 151 (288)
Q Consensus 94 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~ 151 (288)
.... ... .......+..+.+|+++.++ +.+++++++ +|++++++|++.
T Consensus 108 ~~~~--------~~~-~~~~~~~~~~~~~g~~~~~g-g~~~~~~~~pGHt~~~~~~~~~ 156 (289)
T 4ad9_A 108 NPQR--------EEI-IGNGEQQYVYLKDGDVIKTE-GATLRVLYTPGHTDDHMALLLE 156 (289)
T ss_dssp SSCC--------CCC-BTTTTBCEEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEET
T ss_pred Ccch--------hhh-ccCCCCceEEcCCCCEEEeC-CeEEEEEECCCCCCCCEEEEEc
Confidence 2100 000 01122457889999999995 999999988 999999999994
No 37
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.45 E-value=3.8e-13 Score=116.52 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=81.0
Q ss_pred CceeEEEeC--CceEEEeCCCCCc--------cc--c---CcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPS--------RA--L---SQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~--------~~--~---~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
...+|+++. +..+|||||.+.. +. + +|++|++||.|.||++|+..+.... .++||+++.
T Consensus 23 ~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~------~~~v~~~~~ 96 (263)
T 1k07_A 23 DDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT------KAKYMVMDE 96 (263)
T ss_dssp SSBCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH------CCEEEEEHH
T ss_pred CCeEEEEEEeCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc------CCEEEEcHH
Confidence 345667664 5699999997521 01 1 4899999999999999999987632 357999887
Q ss_pred hHHHHHHHHHhhhhcCCC---CC-c-eEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEe
Q 023022 94 IKEDVEQLFEVHRRMDHS---EL-N-HTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSV 153 (288)
Q Consensus 94 ~~~~l~~~~~~~~~~~~~---~~-~-~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~ 153 (288)
..+.+.........+... .. . .....+.+|+.+.++ +.+++++++ +|++++++|++...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~i~~pGHt~g~~~~~~~~~ 161 (263)
T 1k07_A 97 DVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELG-GTVLTAHLTPGHTRGCTTWTMKLK 161 (263)
T ss_dssp HHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEEE
T ss_pred HHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEEC-CeEEEEEECCCCCCCcEEEEEecc
Confidence 766665321100000000 01 0 123567889999995 899999887 79999999999753
No 38
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.44 E-value=7.6e-13 Score=126.53 Aligned_cols=186 Identities=15% Similarity=0.189 Sum_probs=110.9
Q ss_pred CceeEEEeC--CceEEEeCCCCCc----------------------------cc------cCcCEEEEecCChhhhCcHH
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPS----------------------------RA------LSQNFLFISHAHMDHIGGLP 72 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~----------------------------~~------~~i~~I~iTH~H~DH~~gl~ 72 (288)
+..+|++|+ +..+|||||.... .. .+||+|||||.|.||++|++
T Consensus 16 gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl~ 95 (547)
T 2bib_A 16 GGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVD 95 (547)
T ss_dssp SBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHH
T ss_pred CCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCHH
Confidence 345566664 5699999997521 00 14899999999999999999
Q ss_pred HHHHHhCCCCCCCCEEeCCcchHHHH-------------HHHHHhhhhcCCCCCceEEE--EcCCCCeEEecCCeEEEEE
Q 023022 73 MYVATRGLYRMKPPTIIVPSCIKEDV-------------EQLFEVHRRMDHSELNHTLV--GLDVGEEFCMRKDLFVKAF 137 (288)
Q Consensus 73 ~ll~~~~~~~~~~~~i~~p~~~~~~l-------------~~~~~~~~~~~~~~~~~~~~--~l~~g~~~~i~~~~~i~~~ 137 (288)
.|+.... ..+|++++.....+ ..++.... ... ..+. .+..++.+.++ +++|+++
T Consensus 96 ~l~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g--~~~~~~~~~~g~~~~~g-~~~i~~l 164 (547)
T 2bib_A 96 ELLSTYP-----VDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTAT---ETG--VSVIQNITQGDAHFQFG-DMDIQLY 164 (547)
T ss_dssp HHHHHSC-----BSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHH---HTT--CEEECSCCTTTTEEEET-TEEEEEE
T ss_pred HHHHhCC-----ccEEEECcccccccCChHHHHhHHHHHHHHHHHHH---HhC--CeEEEeecCCCceEecC-CeeEEEe
Confidence 9987543 22577765432211 11111110 011 1222 35678899995 9999999
Q ss_pred Ec---CCc-----------CCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCcccc-c
Q 023022 138 KT---YHV-----------IQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVD-E 202 (288)
Q Consensus 138 ~~---~H~-----------~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~-~ 202 (288)
+. .|+ ..+++|++..+ + .+++|+||+....... .
T Consensus 165 ~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~----------------------~---------~~iLftGD~~~~~~~e~~ 213 (547)
T 2bib_A 165 NYENETDSSGELKKIWDDNSNSLISVVKVN----------------------G---------KKIYLGGDLDNVHGAEDK 213 (547)
T ss_dssp SCSCCBCTTSCBCCBSSGGGGCCEEEEEET----------------------T---------EEEEECTTCCSTTSHHHH
T ss_pred cCccccCccccccccCCCCCCcEEEEEEEC----------------------C---------EEEEecCCccchhhhhhh
Confidence 73 232 46889999764 2 4799999998631111 1
Q ss_pred cccccCCCCEEEEecccCCCCCcHHHHhhcCC--CcHHHHHHHHHHcCCCeEEEEeccC-C--CChhHHHHHHHh
Q 023022 203 ANIDVLRARILVMESTYVDDSTTVEQARDYGH--THLSEIVEYAEKFENKAILLIHFSA-R--HKVDEIRRAVDA 272 (288)
Q Consensus 203 ~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H--~~~~~~~~~~~~~~~~~~~l~H~~~-~--~~~~~~~~~~~~ 272 (288)
.......+|+|+.- +| +......+++++++|+.++++.-.. + .+.++.++.++.
T Consensus 214 l~~~~~~~DvLkv~----------------HHG~S~~s~s~~fl~~v~P~~aiiS~g~~n~~~hP~~evl~~l~~ 272 (547)
T 2bib_A 214 YGPLIGKVDLMKFN----------------HHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKE 272 (547)
T ss_dssp HHHHHCCCSEEECT----------------TTTBCSSSSCHHHHHHHCCSEEEESBSSCSBSSSBCHHHHHHHHT
T ss_pred hcccccceeEEEec----------------cccCcccCChHHHHHhcCCcEEEEcCCcccccCCCCHHHHHHHHh
Confidence 11123578998851 12 1122345677777888888766432 2 234445544443
No 39
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.44 E-value=1.8e-12 Score=110.24 Aligned_cols=103 Identities=12% Similarity=0.038 Sum_probs=76.4
Q ss_pred eeEEEeC--CceEEEeCCCCCc----------c--ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS----------R--ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~----------~--~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
.+|+++. +..+|||||.+.. + ..+|++|++||.|.||++|+..+.. ..++||+++...+
T Consensus 37 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~~~ 109 (232)
T 1a7t_A 37 SNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR-------KGVQSYANQMTID 109 (232)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred ceEEEEEeCCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh-------CCCeEEEcHHHHH
Confidence 5677774 5689999997521 0 1258999999999999999998865 1468999887766
Q ss_pred HHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEE-c-CCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFK-T-YHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~-~-~H~~~~~g~~i~ 151 (288)
.+... .+ ......+..++.+.++ +.+++++. + +|++++++|++.
T Consensus 110 ~~~~~-----~~-----~~~~~~~~~g~~~~~g-~~~i~~~~~~pgHt~g~~~~~~~ 155 (232)
T 1a7t_A 110 LAKEK-----GL-----PVPEHGFTDSLTVSLD-GMPLQCYYLGGGHATDNIVVWLP 155 (232)
T ss_dssp HHHHH-----TC-----CCCSEEESSEEEEEET-TEEEEEECCCCSSSTTCCEEEET
T ss_pred HHHhc-----CC-----CCCceecCCCCEEEEC-CeEEEEEeCCCCCCCCCEEEEEC
Confidence 65432 01 1123456788889995 89999985 5 999999999983
No 40
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.43 E-value=1.1e-12 Score=115.41 Aligned_cols=118 Identities=13% Similarity=0.135 Sum_probs=82.6
Q ss_pred CceeEEEeC--CceEEEeCCCCCcc--------c--c---CcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPSR--------A--L---SQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~~--------~--~---~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
++.+|+++. +..+|||||..... . + +|++|++||.|.||++|+..+.... .++||+++.
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~------~~~v~~~~~ 129 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT------GAPVYARAP 129 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH------CCCEEEEHH
T ss_pred CCceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc------CCEEEEcHH
Confidence 345667765 56999999964210 1 2 3899999999999999999997643 356899887
Q ss_pred hHHHHHHHHHhhh--hcC---CCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEe
Q 023022 94 IKEDVEQLFEVHR--RMD---HSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSV 153 (288)
Q Consensus 94 ~~~~l~~~~~~~~--~~~---~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~ 153 (288)
....+........ .+. ........+.+++|+++.++ +.+|+++++ +|++++++|++...
T Consensus 130 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~v~~~~~pgHt~g~~~~~~~~~ 194 (303)
T 4ax1_B 130 AIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVG-PLALTAVASPGHTPGGTSWTWRSC 194 (303)
T ss_dssp HHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEEE
T ss_pred HHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEEC-CeEEEEEeCCCCCccceEEEEEec
Confidence 7776654311000 000 00011246788999999995 999999987 79999999999764
No 41
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.42 E-value=1.5e-12 Score=115.87 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=75.6
Q ss_pred cCceeEEEeC----CceEEEeCCCCCc-------cc----------cCcCEEEEecCChhhhCcHHHHHHHhCCC-CCCC
Q 023022 28 AGHETCIIFP----SLDLAFDIGRCPS-------RA----------LSQNFLFISHAHMDHIGGLPMYVATRGLY-RMKP 85 (288)
Q Consensus 28 ~~~~s~~~i~----~~~iLiD~G~~~~-------~~----------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~-~~~~ 85 (288)
.+.++||++. +..+|||||.... .. .+|++||+||.|.||++|+..|....... ....
T Consensus 37 ~~~n~~ylI~~~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~ 116 (311)
T 2p18_A 37 LKDNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVP 116 (311)
T ss_dssp TTTEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CC
T ss_pred CCCcEEEEEEeCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCC
Confidence 3444466664 3489999975431 11 45899999999999999999998754211 1124
Q ss_pred CEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEE
Q 023022 86 PTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYS 152 (288)
Q Consensus 86 ~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~ 152 (288)
++||+++... .. .....+.+|+.+.++ +.+++++++ +|++++++|++..
T Consensus 117 ~~v~~~~~~~------------~~-----~~~~~l~~g~~l~lg-~~~l~vi~tPGHT~g~i~~~~~~ 166 (311)
T 2p18_A 117 VVVVGGANDS------------IP-----AVTKPVREGDRVQVG-DLSVEVIDAPCHTRGHVLYKVQH 166 (311)
T ss_dssp CEEEEEGGGT------------CT-----TCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEC
T ss_pred CEEEEechhc------------CC-----CCceEeCCCCEEEEC-CeEEEEEECCCCCcccEEEEEec
Confidence 6788876431 00 123467889999995 899999988 9999999999963
No 42
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.42 E-value=1.1e-13 Score=119.01 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=75.5
Q ss_pred cCceeEEEeC------CceEEEeCCCCCc-c--------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCc
Q 023022 28 AGHETCIIFP------SLDLAFDIGRCPS-R--------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPS 92 (288)
Q Consensus 28 ~~~~s~~~i~------~~~iLiD~G~~~~-~--------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~ 92 (288)
+..++||++. +..+|||||.... . ..+|++|++||.|.||++|+..|...+ ...+||+++
T Consensus 12 ~~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~~v~~~~ 86 (245)
T 2gcu_A 12 ESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKL-----PGVKSVISK 86 (245)
T ss_dssp TTTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHS-----TTCEEEEEG
T ss_pred CCceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhC-----CCCeEEecc
Confidence 3456677764 3589999998521 1 135899999999999999999987532 245788876
Q ss_pred chHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEE
Q 023022 93 CIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYS 152 (288)
Q Consensus 93 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~ 152 (288)
.... .....+..|+.+.++ +.+|+++.+ +|++++++|++..
T Consensus 87 ~~~~------------------~~~~~~~~g~~~~~g-~~~i~v~~tpGHt~g~~~~~~~~ 128 (245)
T 2gcu_A 87 ASGS------------------KADLFLEPGDKVSIG-DIYLEVRATPGHTAGCVTYVTGE 128 (245)
T ss_dssp GGCC------------------CCSEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEECC
T ss_pred cccc------------------cCCEEcCCCCEEEEC-CEEEEEEECCCCCCCCEEEEECC
Confidence 5411 012467889999995 899999988 8999999999964
No 43
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.42 E-value=4.6e-13 Score=122.88 Aligned_cols=109 Identities=19% Similarity=0.272 Sum_probs=82.9
Q ss_pred cCceeEEEeC-CceEEEeCCCCCc---------c---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcch
Q 023022 28 AGHETCIIFP-SLDLAFDIGRCPS---------R---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCI 94 (288)
Q Consensus 28 ~~~~s~~~i~-~~~iLiD~G~~~~---------~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~ 94 (288)
|...+|+++. +..+|||||.... . ..+|++||+||.|.||++|++.+.... ...+||+++..
T Consensus 32 g~~~n~~li~~~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~ 106 (402)
T 1e5d_A 32 GTTYNAYLVEDEKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEAC-----QPEKIFTSSLG 106 (402)
T ss_dssp CEEEEEEEECSSSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHH-----CCSEEEEEHHH
T ss_pred CcceEEEEEECCCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHC-----CCCEEEEChHH
Confidence 3356788886 4689999997621 1 136899999999999999999997643 24679999888
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcC--CcCCcceEEE
Q 023022 95 KEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTY--HVIQSQGYVV 150 (288)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~--H~~~~~g~~i 150 (288)
.+.+...+. . . ...+..+++|+.+.++ +.+++++++. |+++++++++
T Consensus 107 ~~~~~~~~~----~--~--~~~~~~~~~g~~~~~g-~~~~~~~~~p~gH~~~~~~~~~ 155 (402)
T 1e5d_A 107 QKAMESHFH----Y--K--DWPVQVVKHGETLSLG-KRTVTFYETRMLHWPDSMVSWF 155 (402)
T ss_dssp HHHHHHHHC----C--S--SCCEEEECTTCEEECS-SCEEEEEECTTSSSTTCEEEEE
T ss_pred HHHHHHHhC----C--C--CCceEEcCCCCEEEEC-CCEEEEEeCCCCCCCCcEEEEE
Confidence 777765431 1 1 1346778899999995 8999999884 9999999877
No 44
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.42 E-value=1.5e-12 Score=109.92 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=76.1
Q ss_pred eeEEEeC--CceEEEeCCCCCc----------c--ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS----------R--ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~----------~--~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
.+|+++. +..+|||||.+.. . ..+|++|++||.|.||++|+..+.. ..++||+++...+
T Consensus 27 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~~~ 99 (223)
T 1m2x_A 27 ANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK-------IGAKTYSTKMTDS 99 (223)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred ccEEEEEeCCEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh-------CCCeEEEcHHHHH
Confidence 5667764 5699999997531 1 1368999999999999999998865 1467999887766
Q ss_pred HHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEE-c-CCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFK-T-YHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~-~-~H~~~~~g~~i~ 151 (288)
.+.... . . .....+.+|+.+.++ +.+++++. + +|++++++|++.
T Consensus 100 ~~~~~~-----~--~---~~~~~~~~g~~~~~g-~~~i~~~~~~pgHt~~~~~~~~~ 145 (223)
T 1m2x_A 100 ILAKEN-----K--P---RAQYTFDNNKSFKVG-KSEFQVYYPGKGHTADNVVVWFP 145 (223)
T ss_dssp HHHHTT-----C--C---CCSEEESSCEEEEET-TEEEEEECCCSSSSSSCCEEEET
T ss_pred HHHhcC-----c--c---CCceecCCCceEEEC-CEEEEEEecCCCCCCCCEEEEEC
Confidence 554211 0 0 112457789999995 89999984 4 999999999983
No 45
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=1.8e-13 Score=128.61 Aligned_cols=119 Identities=17% Similarity=0.149 Sum_probs=84.5
Q ss_pred eeEeceEEEEeeecCceeEEEe--C--CceEEEeCCCCCccc--------cCcCEEEEecCChhhhCcHHHHHHHhCCCC
Q 023022 15 MQLQGYKVEGLSIAGHETCIIF--P--SLDLAFDIGRCPSRA--------LSQNFLFISHAHMDHIGGLPMYVATRGLYR 82 (288)
Q Consensus 15 ~~~~~~~v~g~~~~~~~s~~~i--~--~~~iLiD~G~~~~~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~ 82 (288)
|.+..+...+ ..++||++ . +..+|||||...... ++|++||+||.|.||++|+..|....
T Consensus 4 m~i~~~~~~~----~~~n~yli~~~~~~~~ilID~g~~~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~---- 75 (474)
T 3tp9_A 4 MYLRRFYDEG----LAHASYLVGCQETGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRA---- 75 (474)
T ss_dssp EEEEEEEETT----TTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH----
T ss_pred eEEEEEecCC----ceeEEEEEEECCCCEEEEEcCCCChHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHH----
Confidence 5555554432 34778888 4 469999999775422 36999999999999999999997643
Q ss_pred CCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEe
Q 023022 83 MKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSV 153 (288)
Q Consensus 83 ~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~ 153 (288)
..++|+++.....+.. .. ........+.+|+.+.++ +++|+++++ +|++++++|++...
T Consensus 76 --~~~i~~~~~~~~~~~~------~~---~~~~~~~~~~~g~~~~~g-~~~i~~i~tPGHt~g~~~~~~~~~ 135 (474)
T 3tp9_A 76 --GAAICVSDEGPPEWKS------EY---VKAYPHRLLKDGDELHFG-NVRIVVMHTPGHTPEHVSYLLYDG 135 (474)
T ss_dssp --CCEEEEECCSCGGGCC------GG---GGGSSEEEECTTCEEEET-TEEEEEEECCSSSSSCEEEEEEET
T ss_pred --CCcEEEcCcchhhhcc------cc---cccccceECCCCCEEEEC-CEEEEEEECCCCCCCCEEEEEecC
Confidence 3567776654322210 00 011234678899999995 999999998 89999999999753
No 46
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.41 E-value=5.5e-13 Score=115.74 Aligned_cols=98 Identities=15% Similarity=0.079 Sum_probs=72.3
Q ss_pred CceeEEEeC----CceEEEeCCCCCc--c-----ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHH
Q 023022 29 GHETCIIFP----SLDLAFDIGRCPS--R-----ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKED 97 (288)
Q Consensus 29 ~~~s~~~i~----~~~iLiD~G~~~~--~-----~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~ 97 (288)
...+||++. +..+|||||.... . .+++++|++||.|.||++|+..|.... ...+||+++...
T Consensus 10 ~~n~~yli~~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~-- 82 (260)
T 1qh5_A 10 TDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLE-----SGLKVYGGDDRI-- 82 (260)
T ss_dssp TTEEEEEEEETTTTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHS-----TTCEEEESCTTS--
T ss_pred CceEEEEEEECCCCEEEEEcCCCHHHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHC-----CCCEEEECcccC--
Confidence 445566664 2589999995311 1 136899999999999999999987643 135788875310
Q ss_pred HHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEE
Q 023022 98 VEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVV 150 (288)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i 150 (288)
. .....+..|+.+.++ +.+++++++ +|++++++|++
T Consensus 83 -----------~-----~~~~~~~~g~~~~~g-~~~~~vi~tPGHt~g~~~~~~ 119 (260)
T 1qh5_A 83 -----------G-----ALTHKITHLSTLQVG-SLNVKCLATPCHTSGHICYFV 119 (260)
T ss_dssp -----------T-----TCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEE
T ss_pred -----------C-----CCCEEeCCCCEEEEC-CEEEEEEECCCCCCCCEEEEE
Confidence 0 012457889999995 899999988 89999999998
No 47
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.41 E-value=9.1e-13 Score=114.22 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=73.3
Q ss_pred cCceeEEEeC---CceEEEeCCCCCc--c-----ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHH
Q 023022 28 AGHETCIIFP---SLDLAFDIGRCPS--R-----ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKED 97 (288)
Q Consensus 28 ~~~~s~~~i~---~~~iLiD~G~~~~--~-----~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~ 97 (288)
+..++||++. +..+|||||.... . .++|++|++||.|.||++|+..+....+ ..+||+++...
T Consensus 16 ~~~n~~yli~~~~~~~vlID~G~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~-----~~~v~~~~~~~-- 88 (258)
T 2qed_A 16 FQDNYIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFP-----QMTVYGPAETQ-- 88 (258)
T ss_dssp TTTEEEEEEECTTSEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCT-----TCEEEECGGGG--
T ss_pred cCceEEEEEEECCCcEEEEeCCCcHHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCC-----CCEEEeccccc--
Confidence 3445566664 3489999996421 1 1368999999999999999999876432 26789886541
Q ss_pred HHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEE
Q 023022 98 VEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYV 149 (288)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~ 149 (288)
.. .....+.+|+.+.++ +.+++++++ +|++++++|+
T Consensus 89 ----------~~-----~~~~~~~~g~~~~~g-~~~~~vi~tPGHt~g~~~~~ 125 (258)
T 2qed_A 89 ----------DK-----GATHLVGDGDTIRVL-GEKFTLFATPGHTLGHVCYF 125 (258)
T ss_dssp ----------GG-----TCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEE
T ss_pred ----------CC-----CCcEEeCCCCEEEEC-CcEEEEEECCCCCCCCeEEE
Confidence 00 023567889999995 899999988 8999999998
No 48
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.39 E-value=8.4e-13 Score=123.84 Aligned_cols=117 Identities=13% Similarity=0.134 Sum_probs=83.4
Q ss_pred eeEeceEEEEeeecCceeEEEe--C--CceEEEeCCCCCccc--------cCcCEEEEecCChhhhCcHHHHHHHhCCCC
Q 023022 15 MQLQGYKVEGLSIAGHETCIIF--P--SLDLAFDIGRCPSRA--------LSQNFLFISHAHMDHIGGLPMYVATRGLYR 82 (288)
Q Consensus 15 ~~~~~~~v~g~~~~~~~s~~~i--~--~~~iLiD~G~~~~~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~ 82 (288)
|.+..+... ...++||++ + ++.+|||||...... .+|++|++||.|.||++|+..|....
T Consensus 25 m~i~~~~~~----~~~~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~---- 96 (466)
T 3r2u_A 25 MFFKQFYDK----HLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL---- 96 (466)
T ss_dssp EEEEEEEET----TTTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH----
T ss_pred eEEEEEecC----CccceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhh----
Confidence 444444432 244678887 3 469999999765432 36999999999999999999997644
Q ss_pred CCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEE
Q 023022 83 MKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYS 152 (288)
Q Consensus 83 ~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~ 152 (288)
..++|+++.....+. ....+.....+.+|+.+.++ +++++++++ +|++++++|++..
T Consensus 97 --~a~v~~~~~~~~~~~----------~~~~~~~~~~~~~g~~l~~g-~~~l~vi~tPGHT~g~~~~~~~~ 154 (466)
T 3r2u_A 97 --NANIYVSGESDDTLG----------YKNMPNHTHFVQHNDDIYVG-NIKLKVLHTPGHTPESISFLLTD 154 (466)
T ss_dssp --CCEEEEECCSCTTTS----------CCSCCTTCEEECTTCEEEET-TEEEEEEECCSSSTTCEEEEEEC
T ss_pred --CCeEEECcchhhhhc----------cccCCCCCEEeCCCCEEEEC-CEEEEEEECCCCCCCCEEEEEcC
Confidence 356777765322110 00111135678899999995 999999998 7999999999975
No 49
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.38 E-value=7.1e-13 Score=121.49 Aligned_cols=108 Identities=12% Similarity=0.174 Sum_probs=81.4
Q ss_pred CceeEEEeC-CceEEEeCCCCCc---------c---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchH
Q 023022 29 GHETCIIFP-SLDLAFDIGRCPS---------R---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIK 95 (288)
Q Consensus 29 ~~~s~~~i~-~~~iLiD~G~~~~---------~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~ 95 (288)
...+|+++. ++.+|||||.... . ..+|++||+||.|.||++|+..+.... ...+||+++...
T Consensus 34 ~~~n~~li~~~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~~~~v~~~~~~~ 108 (398)
T 1ycg_A 34 TTYNAYLIVDDKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELC-----PDAHVLCTQRAF 108 (398)
T ss_dssp EEECCEEECSSSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHC-----TTCEEEECHHHH
T ss_pred eeEEEEEEECCCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHC-----CCCEEEEcHHHH
Confidence 345677776 4699999998621 1 136899999999999999999997643 246899998877
Q ss_pred HHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcC--CcCCcceEEE
Q 023022 96 EDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTY--HVIQSQGYVV 150 (288)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~--H~~~~~g~~i 150 (288)
+.+...+. .. ......+.+|+.+.++ +.+++++++. |+++++++++
T Consensus 109 ~~l~~~~~------~~--~~~~~~~~~g~~~~~g-~~~~~~~~~p~gH~~~~~~~~~ 156 (398)
T 1ycg_A 109 DSLKAHYS------HI--DFNYTIVKTGTSVSLG-KRSLTFIEAPMLHWPDSMFTYV 156 (398)
T ss_dssp HHHHHHTC------SC--CCEEEECCTTCEEECS-SCEEEEEECTTSSSTTCEEEEE
T ss_pred HHHHHHhC------CC--CcceEEeCCCCEEeeC-CcEEEEEeCCCCCCCCcEEEEE
Confidence 76654321 11 2356788999999995 8999998874 9999998876
No 50
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.36 E-value=7.1e-12 Score=106.15 Aligned_cols=173 Identities=12% Similarity=0.058 Sum_probs=104.6
Q ss_pred ceeEEEeC--CceEEEeCCCCCcc------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchH
Q 023022 30 HETCIIFP--SLDLAFDIGRCPSR------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIK 95 (288)
Q Consensus 30 ~~s~~~i~--~~~iLiD~G~~~~~------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~ 95 (288)
..+|+++. ++.+|||||.+... ..+|++|++||.|.||++|+..+.+ ...+||+++...
T Consensus 25 ~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~-------~~~~v~~~~~~~ 97 (233)
T 3q6v_A 25 QENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT-------LGAKIVATQMTY 97 (233)
T ss_dssp CEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHHH
T ss_pred CCcEEEEEeCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh-------CCCEEEEcHHHH
Confidence 34455554 56999999986421 1368999999999999999998863 246799998877
Q ss_pred HHHHHHHHhhh--------hcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEeccccchhhcCCChH
Q 023022 96 EDVEQLFEVHR--------RMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGD 167 (288)
Q Consensus 96 ~~l~~~~~~~~--------~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~~~~~~~~~~g~~~~ 167 (288)
+.+........ .+...........++.+..+.. +++++...+.+|+++++++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~v~~~~pGHt~g~~~~~~~~--------------- 161 (233)
T 3q6v_A 98 DLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQN-GSIRAMYLGEAHTKDGIFVYFPA--------------- 161 (233)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETT-TTEEEECCCCSSSSSCCEEEETT---------------
T ss_pred HHHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcC-ceEEEEECCCCCCcCcEEEEecc---------------
Confidence 76654322110 0110011111224455544443 35665555469999999999842
Q ss_pred HHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHc
Q 023022 168 EIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKF 247 (288)
Q Consensus 168 ~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 247 (288)
.+++| ||+-..... .. .... ....+.++++.+++.
T Consensus 162 ------------------~~~lf-gD~~~~~~~-------~~---------~~~~----------~~~~~~~sl~~l~~l 196 (233)
T 3q6v_A 162 ------------------ERVLY-GNCILKENL-------GN---------MSFA----------NRTEYPKTLEKLKGL 196 (233)
T ss_dssp ------------------TTEEE-CTTTSCSSC-------CC---------CTTC----------CTTHHHHHHHHHHHH
T ss_pred ------------------CCEEE-CceeccccC-------CC---------CCcC----------CHHHHHHHHHHHHHh
Confidence 24888 998652100 00 0111 134556666666666
Q ss_pred ------CCCeEEEEeccCCCChhHHHHHH
Q 023022 248 ------ENKAILLIHFSARHKVDEIRRAV 270 (288)
Q Consensus 248 ------~~~~~~l~H~~~~~~~~~~~~~~ 270 (288)
+++.++..|-.+-...+.+...+
T Consensus 197 ~~~~~~~~~~i~pgHg~~~~~~~~i~~~~ 225 (233)
T 3q6v_A 197 IEQGELKVDSIIAGHDTPIHDVGLIDHYL 225 (233)
T ss_dssp HHTTSSCCSEEECSSSSSEECTHHHHHHH
T ss_pred hhcccCCCeEEECCCCCccCCHHHHHHHH
Confidence 78899999987755545554443
No 51
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.36 E-value=2.5e-12 Score=118.08 Aligned_cols=109 Identities=10% Similarity=0.022 Sum_probs=80.9
Q ss_pred ceeEEEeC--CceEEEeCCCCCc---------------cccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCc
Q 023022 30 HETCIIFP--SLDLAFDIGRCPS---------------RALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPS 92 (288)
Q Consensus 30 ~~s~~~i~--~~~iLiD~G~~~~---------------~~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~ 92 (288)
..+|+++. +..+|||||.... ...+|++|++||.|.||++|+..+...+ ...+||+++
T Consensus 34 ~~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----p~~~v~~~~ 108 (404)
T 2ohh_A 34 TYNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRF-----PEAPIYCTE 108 (404)
T ss_dssp EECCEEEECSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS-----TTCCEEECH
T ss_pred eEEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHC-----CCCEEEECH
Confidence 34566664 3489999998621 1136899999999999999999987643 235799998
Q ss_pred chHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcC--CcCCcceEEEE
Q 023022 93 CIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTY--HVIQSQGYVVY 151 (288)
Q Consensus 93 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~--H~~~~~g~~i~ 151 (288)
...+.+...+.. . ....+..+.+|+.+.++ +.+++++++. |++++++|++.
T Consensus 109 ~~~~~~~~~~~~----~---~~~~~~~~~~g~~~~~g-~~~i~~~~~p~gH~~~~~~~~~~ 161 (404)
T 2ohh_A 109 VAVKGLLKHYPS----L---REAEFMTVKTGDVLDLG-GKTLTFLETPLLHWPDSMFTLLD 161 (404)
T ss_dssp HHHHHHHHHCGG----G---GGSCEEECCTTCEEECS-SCEEEEEECTTSSSTTCEEEEEE
T ss_pred HHHHHHHHHhcc----c---ccCCceEcCCCCEEEEC-CEEEEEEeCCCCCCCCceEEEEC
Confidence 877766543211 0 01246788899999995 8999999884 99999999884
No 52
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.35 E-value=2.2e-12 Score=112.01 Aligned_cols=117 Identities=14% Similarity=0.069 Sum_probs=80.4
Q ss_pred CceeEEEeC--CceEEEeCCCCCcc--------c--c---CcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPSR--------A--L---SQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~~--------~--~---~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
++.+|+++. ++.+|||||..... . + +|++||+||.|.||++|+..|.... .++||+++.
T Consensus 36 ~~~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~------~~~v~~~~~ 109 (269)
T 1sml_A 36 EDLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT------GAKVAANAE 109 (269)
T ss_dssp TTBCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS------SCEEEECHH
T ss_pred CCcEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc------CCeEEECHH
Confidence 345666665 56999999975210 1 2 4899999999999999999987642 467999887
Q ss_pred hHHHHHHHHHhhhhcCC-CCC-c-eEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEE
Q 023022 94 IKEDVEQLFEVHRRMDH-SEL-N-HTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYS 152 (288)
Q Consensus 94 ~~~~l~~~~~~~~~~~~-~~~-~-~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~ 152 (288)
....+.........+.. ... + .....+.+|+.+.++ +++++++++ +|++++++|++..
T Consensus 110 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g-~~~i~~~~~pGHt~g~~~~~~~~ 171 (269)
T 1sml_A 110 SAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVG-GIVFTAHFMAGHTPGSTAWTWTD 171 (269)
T ss_dssp HHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEET-TEEEEEEECCSSSTTCEEEEEEE
T ss_pred HHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEEC-CEEEEEEECCCCCcccEEEEEec
Confidence 76665432100000000 000 1 123567889999995 999999988 7999999999865
No 53
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.35 E-value=9.4e-13 Score=111.55 Aligned_cols=103 Identities=15% Similarity=0.103 Sum_probs=75.0
Q ss_pred eeEEEeC--CceEEEeCCCCCc----------c--ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS----------R--ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~----------~--~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
.+|+++. ++.+|||||.... . ..+|++|++||.|.||++|+..+... .+++|+++...+
T Consensus 41 ~n~~li~~~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~-------~~~v~~~~~~~~ 113 (227)
T 1mqo_A 41 SNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER-------GIKAHSTALTAE 113 (227)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH-------TCEEECBHHHHH
T ss_pred ceEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC-------CcEEEeccchHH
Confidence 4667665 5689999998742 1 14689999999999999999988752 367999877655
Q ss_pred HHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEE-Ec-CCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAF-KT-YHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~-~~-~H~~~~~g~~i~ 151 (288)
.+... .+ ...+..+..++.+.++ +++++++ ++ +|++++++|++.
T Consensus 114 ~~~~~-----~~-----~~~~~~~~~~~~~~~g-~~~i~~~~~~pgHt~g~~~~~~~ 159 (227)
T 1mqo_A 114 LAKKN-----GY-----EEPLGDLQTVTNLKFG-NMKVETFYPGKGHTEDNIVVWLP 159 (227)
T ss_dssp HHHHT-----TC-----CCCCCCBCSEEEEEET-TEEEEEECCCCSSSSSCCEEEET
T ss_pred HHHhc-----CC-----CCCccccCCCCeeeEC-CEEEEEEecCCCCCCCCEEEEEC
Confidence 44321 01 1122346677889995 8999987 44 999999999983
No 54
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.33 E-value=2.4e-12 Score=110.76 Aligned_cols=99 Identities=18% Similarity=0.129 Sum_probs=63.9
Q ss_pred cCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEE
Q 023022 55 QNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFV 134 (288)
Q Consensus 55 i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i 134 (288)
|++|++||.|.||++|++.|. ..+||+++...+.+............ ....+..++ ++...++ ++++
T Consensus 101 I~~VilTH~H~DH~gg~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~-~i~~ 167 (254)
T 3dha_A 101 LLYIISSHLHFDHAGGNGAFT---------NTPIIVQRTEYEAALHREEYMKECIL--PHLNYKIIE-GDYEVVP-GVQL 167 (254)
T ss_dssp CSEEECSCCSHHHHTTGGGCS---------SSCEEEEHHHHHHHHHCTTSCGGGSC--TTSCEEEEC-SSEEEET-TEEE
T ss_pred CCEEEcCCChhhcCCChHHCC---------CCEEEECHHHHHHhhccccccccccC--cccceEEec-CCccccC-CEEE
Confidence 899999999999999987652 35689987776655421111000000 112333333 5555564 7655
Q ss_pred EEEEcCCcCCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCC
Q 023022 135 KAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSD 197 (288)
Q Consensus 135 ~~~~~~H~~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~ 197 (288)
...| +|++++++|++...+ + ++++|+||+.+.
T Consensus 168 ~~~p-GHt~g~~~~~~~~~~---------------------~---------~~vl~~GD~~~~ 199 (254)
T 3dha_A 168 LYTP-GHSPGHQSLFIETEQ---------------------S---------GSVLLTIDASYT 199 (254)
T ss_dssp EECC-SSSTTCEEEEEEETT---------------------T---------EEEEEEETTCSS
T ss_pred EECC-CCCCCCEEEEEEeCC---------------------C---------CEEEEEecccch
Confidence 5444 899999999997641 2 379999999873
No 55
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.33 E-value=2e-12 Score=114.31 Aligned_cols=117 Identities=11% Similarity=0.073 Sum_probs=78.9
Q ss_pred ceeEEEe--C-CceEEEeCCCCCc---------c----ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 30 HETCIIF--P-SLDLAFDIGRCPS---------R----ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 30 ~~s~~~i--~-~~~iLiD~G~~~~---------~----~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
.++|+++ . ++.+|||||.+.. + ..+|++|++||.|.||++|+..+...+ ...+|++++.
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~-----~~a~v~~~~~ 97 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRL-----PNVQVLASER 97 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGC-----TTCEEEEEHH
T ss_pred CceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHhC-----CCCeEEECHH
Confidence 4556666 3 5689999998531 1 135899999999999999999886422 3468999887
Q ss_pred hHHHHHHHHH-----hhh-----hcCC----CC-CceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEE
Q 023022 94 IKEDVEQLFE-----VHR-----RMDH----SE-LNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVY 151 (288)
Q Consensus 94 ~~~~l~~~~~-----~~~-----~~~~----~~-~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~ 151 (288)
..+.+..... ... .+.. .. .......+.+|+.+.+++|.+++++++ +|++++++|++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~ 171 (303)
T 2vw8_A 98 TCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV 171 (303)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEET
T ss_pred HHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEEC
Confidence 6654432110 000 0000 00 012347788999999964499999887 899999999984
No 56
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.33 E-value=4.2e-11 Score=102.37 Aligned_cols=170 Identities=11% Similarity=0.053 Sum_probs=108.3
Q ss_pred ceeEEEeC--C-ceEEEeCCCCCc----------cc--cCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcch
Q 023022 30 HETCIIFP--S-LDLAFDIGRCPS----------RA--LSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCI 94 (288)
Q Consensus 30 ~~s~~~i~--~-~~iLiD~G~~~~----------~~--~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~ 94 (288)
.++|+++. + ..+|||||.... +. .+..+|++||.|.||++|+..+.. . ..+||+++..
T Consensus 29 ~~n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~ 101 (246)
T 2fhx_A 29 SSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK-M------GAETWSSDLT 101 (246)
T ss_dssp TEEEEEEECTTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH-T------TCEEEEEHHH
T ss_pred CCCEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhh-c------CCEEEEcHHH
Confidence 45667663 3 489999997521 11 123489999999999999998854 1 4689999887
Q ss_pred HHHHHHHHHhh-----hhcC----------CCCC-ceEEEEcCCCCeEEecCCeEEEEEE-c-CCcCCcceEEEEEeccc
Q 023022 95 KEDVEQLFEVH-----RRMD----------HSEL-NHTLVGLDVGEEFCMRKDLFVKAFK-T-YHVIQSQGYVVYSVKQK 156 (288)
Q Consensus 95 ~~~l~~~~~~~-----~~~~----------~~~~-~~~~~~l~~g~~~~i~~~~~i~~~~-~-~H~~~~~g~~i~~~~~~ 156 (288)
.+.+....... ..+. .... +..+..+.+|+.+.++ +.+++++. + +|++++++|++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g-~~~i~~~~~~pGHt~g~~~~~~~~---- 176 (246)
T 2fhx_A 102 KQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFS-NELVEVSFPGPAHSPDNVVVYFPK---- 176 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEET-TEEEEEECCCCSSSTTCCEEEETT----
T ss_pred HHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEEC-CEEEEEEeCCCCCCCCCEEEEEcC----
Confidence 76664322110 0000 0111 1245568889999995 89999984 5 8999999999831
Q ss_pred cchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCc
Q 023022 157 LKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTH 236 (288)
Q Consensus 157 ~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~ 236 (288)
.+++|+||+-..... . + +.... -..
T Consensus 177 -----------------------------~~~lf~GD~~~~~~~-------~--~-------~~~~~----------~~~ 201 (246)
T 2fhx_A 177 -----------------------------KKLLFGGCMIKPKEL-------G--Y-------LGDAN----------VKA 201 (246)
T ss_dssp -----------------------------TTEEEEETTCCSSCC-------C--C-------CTTCC----------TTT
T ss_pred -----------------------------CCEEEECCEeccCCC-------C--C-------CCCCC----------HHH
Confidence 259999999763110 0 0 11111 134
Q ss_pred HHHHHHHHHHcCCCeEEEEeccCCCChhHHH
Q 023022 237 LSEIVEYAEKFENKAILLIHFSARHKVDEIR 267 (288)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~H~~~~~~~~~~~ 267 (288)
+.+.++.+.+..++.++..|-.+ ++.+.+.
T Consensus 202 ~~~sl~~l~~l~~~~i~pgHg~~-~~~~~l~ 231 (246)
T 2fhx_A 202 WPDSARRLKKFDAKIVIPGHGEW-GGPEMVN 231 (246)
T ss_dssp HHHHHHHGGGSCCSEEEESBSCC-BSTHHHH
T ss_pred HHHHHHHHHhCCCCEEECCCCCc-CCHHHHH
Confidence 56666666677888999999766 4444443
No 57
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.30 E-value=4e-12 Score=108.73 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=72.7
Q ss_pred eeEEEeC--CceEEEeCCCCCc-----------c-ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS-----------R-ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~-----------~-~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
++|+++. +..+|||||.... . ..+|++||+||.|.||++|+..+... .++||+++...+
T Consensus 48 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~-------~~~v~~~~~~~~ 120 (243)
T 4hl2_A 48 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA-------GIATYANALSNQ 120 (243)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT-------TCEEEEEHHHHH
T ss_pred ceEEEEEECCcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhC-------CCeEEECHHHHH
Confidence 5777775 4699999995321 1 23689999999999999999998651 567999877665
Q ss_pred HHHHHHHhhhhcCCCCCce---EEEEcCCCCeEEecCCeEEEEE-EcCCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNH---TLVGLDVGEEFCMRKDLFVKAF-KTYHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~---~~~~l~~g~~~~i~~~~~i~~~-~~~H~~~~~g~~i~ 151 (288)
.+..... . .....+ ....+..|+.+.++ ++++ .+ ..+|++++++|++.
T Consensus 121 ~~~~~~~----~-~~~~~~~~~~~~~~~~g~~~~~g-~~~v-~~~~pGHt~g~~~~~~~ 172 (243)
T 4hl2_A 121 LAPQEGM----V-AAQHSLTFAANGWVEPATAPNFG-PLKV-FYPGPGHTSDNITVGID 172 (243)
T ss_dssp HGGGTTC----C-CCSEEECBCTTSBBCGGGSTTCT-TEEE-ECCCSSSSTTCCEEEET
T ss_pred HHhcccc----c-ccccccccccceEecCCCeEEEC-CEEE-EeCCCCCCcCCEEEEEc
Confidence 5432110 0 000000 01235677888885 8988 54 44899999999984
No 58
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.28 E-value=7.1e-12 Score=115.53 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=78.6
Q ss_pred eeEEEeC-CceEEEeCCCCCc---------c---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHH
Q 023022 31 ETCIIFP-SLDLAFDIGRCPS---------R---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKED 97 (288)
Q Consensus 31 ~s~~~i~-~~~iLiD~G~~~~---------~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~ 97 (288)
.+|+++. ++.+|||||.... + ..+|++|++||.|.||++|+..+... ....+||+++...+.
T Consensus 41 ~n~~li~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~-----~~~~~v~~~~~~~~~ 115 (414)
T 2q9u_A 41 YNSYFIDDECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHK-----FTNATFVCTKKCQEH 115 (414)
T ss_dssp ECCEEECSSSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGG-----STTCEEEECHHHHHH
T ss_pred eeEEEEECCCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHH-----CCCCEEEECHHHHHH
Confidence 5677776 5689999998421 0 13689999999999999999988642 235689999888776
Q ss_pred HHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc--CCcCCcceEEE
Q 023022 98 VEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT--YHVIQSQGYVV 150 (288)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~--~H~~~~~g~~i 150 (288)
+...+. .. ......+++|+.+.++ +.+++++++ +|++++++++.
T Consensus 116 ~~~~~~------~~--~~~~~~~~~g~~~~lg-~~~~~~~~~p~gHt~~~~~~~~ 161 (414)
T 2q9u_A 116 LKILYG------ME--KATWLIVDDKYTLKIG-KRTLKFIPVPLLHWPDSTFTYC 161 (414)
T ss_dssp HHHHHC------CT--TCCEEECCTTCCEECS-SCEEEEEECTTSSSTTCEEEEE
T ss_pred HHHHhC------CC--CCeeEEeCCCCEEEEC-CeEEEEEeCCCCCCCCceEEEE
Confidence 654331 11 1245678899999995 888888877 59999988766
No 59
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.28 E-value=4.4e-13 Score=113.31 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=69.2
Q ss_pred CceeEEEeC--CceEEEeCCCCCc-----cc--------cCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPS-----RA--------LSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~-----~~--------~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
+.++|+++. +..+|||||.... .. .+|++||+||.|.||++|+..+. ..+||+++.
T Consensus 33 ~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~---------~~~v~~~~~ 103 (221)
T 1ztc_A 33 HFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFE---------NATFYVHEV 103 (221)
T ss_dssp CBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCT---------TCEEEEEGG
T ss_pred CceEEEEEEeCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCC---------CCEEEEeHH
Confidence 556777775 4689999997421 11 15899999999999999987652 356777765
Q ss_pred hHHHHHHHHHhhhh-----cC-CCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEEEe
Q 023022 94 IKEDVEQLFEVHRR-----MD-HSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSV 153 (288)
Q Consensus 94 ~~~~l~~~~~~~~~-----~~-~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~~~ 153 (288)
. +...+..... +. ......++..+++++.+. ++++++...| +|++++++|++..+
T Consensus 104 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~v~~~p-GHt~g~~~~~~~~~ 164 (221)
T 1ztc_A 104 Y---KTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLF-DEKVKVFHTP-WHAREHLSFLLDTE 164 (221)
T ss_dssp G---GGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEET-TTTEEEEECC-SSSTTCEEEEEEET
T ss_pred H---hhhhhhhhccchhhhhhhccccccceEEeCCCCEEE-CCeEEEEEcC-CCCcccEEEEEEcC
Confidence 1 1100000000 00 000012456777887764 2366666655 99999999999753
No 60
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.27 E-value=3e-11 Score=111.25 Aligned_cols=104 Identities=17% Similarity=0.176 Sum_probs=79.5
Q ss_pred eEEEeC--CceEEEeCCCCCc---------c---ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHH
Q 023022 32 TCIIFP--SLDLAFDIGRCPS---------R---ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKED 97 (288)
Q Consensus 32 s~~~i~--~~~iLiD~G~~~~---------~---~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~ 97 (288)
+||++. ++.+|||+|.... + ..+|++|++||.|.||++|++.+++..+ ..++|++++.....
T Consensus 53 NsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~----~~~~v~~s~~~~~~ 128 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIG----HDVEIIASNFGKRL 128 (410)
T ss_dssp EEEEEECSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHC----SCCEEEECHHHHHH
T ss_pred EEEEEEECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcC----CCCEEEeCHHHHHH
Confidence 678884 4689999996432 1 1259999999999999999999987442 35689999887777
Q ss_pred HHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEc-C-CcCCcceEEE
Q 023022 98 VEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKT-Y-HVIQSQGYVV 150 (288)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~-H~~~~~g~~i 150 (288)
+...+. . ..+..++.|++++++ +.+++++++ + |++++..++.
T Consensus 129 l~~~~~------~----~~~~~v~dGd~l~lG-~~~L~~i~tPg~H~p~~~~~y~ 172 (410)
T 4dik_A 129 LEGFYG------I----KDVTVVKDGEEREIG-GKKFKFVMTPWLHWPDTMVTYL 172 (410)
T ss_dssp HHHHHC------C----CCEEECCTTCEEEET-TEEEEEEECTTSSSTTCEEEEE
T ss_pred HHhhcC------c----cceeEecCCCEEeec-ceEEEEecCCCCCCCCCeeEEe
Confidence 765431 1 146789999999995 899999887 4 8898887764
No 61
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.24 E-value=1.1e-11 Score=107.83 Aligned_cols=168 Identities=18% Similarity=0.152 Sum_probs=97.9
Q ss_pred eeEEEeC--CceEEEeCCCCCcc--------------------c-----c---CcCEEEEecCChhhhCcHHHHHHHhCC
Q 023022 31 ETCIIFP--SLDLAFDIGRCPSR--------------------A-----L---SQNFLFISHAHMDHIGGLPMYVATRGL 80 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~~--------------------~-----~---~i~~I~iTH~H~DH~~gl~~ll~~~~~ 80 (288)
.+|+++. ++.+|||||.+... . + +|++|++||.|.||++|+..|
T Consensus 35 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~------ 108 (274)
T 3aj3_A 35 VYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF------ 108 (274)
T ss_dssp EEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC------
T ss_pred EEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC------
Confidence 4777775 56899999986421 1 1 389999999999999999765
Q ss_pred CCCCCCEEeCCcchHHHHHHHHHh----hhh--c--------C-----CCC---CceEEEEcCCCCeEEecCCeEEEEEE
Q 023022 81 YRMKPPTIIVPSCIKEDVEQLFEV----HRR--M--------D-----HSE---LNHTLVGLDVGEEFCMRKDLFVKAFK 138 (288)
Q Consensus 81 ~~~~~~~i~~p~~~~~~l~~~~~~----~~~--~--------~-----~~~---~~~~~~~l~~g~~~~i~~~~~i~~~~ 138 (288)
...+||+++...+.+...... +.. + . ... ...++..++ +.+.++ + ++++++
T Consensus 109 ---~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~-g-~~~v~~ 181 (274)
T 3aj3_A 109 ---PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGID--GDVDLA-R-GVKLIS 181 (274)
T ss_dssp ---TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEEC--SSEEEE-T-TEEEEE
T ss_pred ---CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcC--CccccC-C-EEEEEE
Confidence 135788887776655421110 000 0 0 000 022445554 247774 6 455555
Q ss_pred c-CCcCCcceEEEEEeccccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCCccccccccccCCCCEEEEec
Q 023022 139 T-YHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVLRARILVMES 217 (288)
Q Consensus 139 ~-~H~~~~~g~~i~~~~~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~~~~~~~~~~~~~~d~li~E~ 217 (288)
+ +|++++++|++..++ + .+++|+||+.+... ......-.
T Consensus 182 ~pGHt~g~~~~~~~~~~---------------------~---------~~~lf~GD~~~~~~---~~~~~~~~------- 221 (274)
T 3aj3_A 182 TPGHSIGHYSLLVEFPR---------------------R---------KPILFTIDAAYTQK---SLETLCQA------- 221 (274)
T ss_dssp CTTSSTTCEEEEECCSS---------------------S---------CCEEEEETTCSSHH---HHHHTCCC-------
T ss_pred CCCCCceeeEEEEECCC---------------------C---------CEEEEEechhhhHH---HhcCCCCC-------
Confidence 5 799999999996421 1 36999999876310 00000000
Q ss_pred ccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEEeccC
Q 023022 218 TYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLIHFSA 259 (288)
Q Consensus 218 t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~H~~~ 259 (288)
.+. .+ . ...+.+++.+.++..+.+. .+++.|..+
T Consensus 222 ~~~-~d--~----~~~~~sl~~l~~l~~~~~~-~i~pgH~~~ 255 (274)
T 3aj3_A 222 AFH-ID--P----VAGVNSMRKVKKLAEDHGA-ELMYSHDMD 255 (274)
T ss_dssp SCC-SC--H----HHHHHHHHHHHHHHHHHTC-EEEESSCHH
T ss_pred cee-cC--H----HHHHHHHHHHHHHHhcCCC-EEEecCCHH
Confidence 011 11 0 1124466677776665554 888899754
No 62
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.23 E-value=4.6e-12 Score=110.77 Aligned_cols=129 Identities=15% Similarity=0.171 Sum_probs=79.1
Q ss_pred eeEEEeC--CceEEEeCCCCCc----------------c------c-----cCcCEEEEecCChhhhCcHHHHHHHhCCC
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS----------------R------A-----LSQNFLFISHAHMDHIGGLPMYVATRGLY 81 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~----------------~------~-----~~i~~I~iTH~H~DH~~gl~~ll~~~~~~ 81 (288)
.+|+++. ++.+|||||.+.. . . .+|++|++||.|.||++|++.+....
T Consensus 48 ~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~--- 124 (280)
T 3esh_A 48 THPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHA--- 124 (280)
T ss_dssp CCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCC---
T ss_pred EEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCccccccccc---
Confidence 3456654 5799999997642 0 0 14789999999999999998775310
Q ss_pred CCCCCEEeCCcchHHHHHHHHHhh-hhcC---CCCCceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEeccc
Q 023022 82 RMKPPTIIVPSCIKEDVEQLFEVH-RRMD---HSELNHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSVKQK 156 (288)
Q Consensus 82 ~~~~~~i~~p~~~~~~l~~~~~~~-~~~~---~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~~~~ 156 (288)
.....++|+++.....+....... ..+. ......++..++.+ ..+.+++ +++++ +|++++++|++..+
T Consensus 125 ~fp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~gi--~~~~~pGHt~g~~~~~i~~~--- 197 (280)
T 3esh_A 125 IFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKH--FEPVPGI--KMQHSGGHSFGHTIITIESQ--- 197 (280)
T ss_dssp SSTTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSE--ECSSTTE--EEEECCSSSTTCEEEEEEET---
T ss_pred CCCCCEEEECHHHHHHhhCcccccccchhhhhhhhhhheEEEeCCC--CeEcCCE--EEEEcCCCCcccEEEEEEEC---
Confidence 113568999877665554210000 0000 00111234444433 3344454 44555 89999999999753
Q ss_pred cchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCC
Q 023022 157 LKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSD 197 (288)
Q Consensus 157 ~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~ 197 (288)
+ .+++|+||+-+.
T Consensus 198 -------------------~---------~~vlftGD~~~~ 210 (280)
T 3esh_A 198 -------------------G---------DKAVHMGDIFPT 210 (280)
T ss_dssp -------------------T---------EEEEECGGGSCS
T ss_pred -------------------C---------cEEEEEEccCCc
Confidence 2 479999999873
No 63
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.23 E-value=4.4e-11 Score=100.83 Aligned_cols=113 Identities=12% Similarity=0.075 Sum_probs=71.6
Q ss_pred CceeEEEeC--CceEEEeCCCCCcc------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcch
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPSR------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCI 94 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~~------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~ 94 (288)
...+|+++. ++.+|||||.+... ..+|++|++||.|.||++|+..+.. ...+||+++..
T Consensus 21 ~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-------~~~~v~~~~~~ 93 (227)
T 3iog_A 21 VQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS-------IGAKVVSTRQT 93 (227)
T ss_dssp SCEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH-------TTCEEEEEHHH
T ss_pred ccCcEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh-------CCCeEEECHHH
Confidence 456677764 46999999975310 1358999999999999999998753 24679999888
Q ss_pred HHHHHHHHHhhh-----hcC-CC--CCceEEEEcCCCCeEEecCCeEEEEEE--cCCcCCcceEEEE
Q 023022 95 KEDVEQLFEVHR-----RMD-HS--ELNHTLVGLDVGEEFCMRKDLFVKAFK--TYHVIQSQGYVVY 151 (288)
Q Consensus 95 ~~~l~~~~~~~~-----~~~-~~--~~~~~~~~l~~g~~~~i~~~~~i~~~~--~~H~~~~~g~~i~ 151 (288)
...+........ ... .. ........+ .+ .+.++ +..++++. .+|+++++++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~-~~~~~~~~~~pGHt~g~~~~~~~ 157 (227)
T 3iog_A 94 RDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVH-DG-DFTLQ-EGKVRAFYAGPAHTPDGIFVYFP 157 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEE-SS-CEEET-TTTEEEECCCCSSSSSCCEEEET
T ss_pred HHHHHHhhHHHHHHhhcCCCCCCCccccCCCEee-cC-eEEEc-CcEEEEEecCCCCCCCcEEEEec
Confidence 776654322110 000 00 111111112 23 47775 44566665 4999999999984
No 64
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.21 E-value=2.1e-11 Score=105.81 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=72.1
Q ss_pred eeEEEeC--CceEEEeCCCCCc----------c--ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPS----------R--ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~----------~--~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
.+|+++. ++.+|||||.+.. + ..+|++|++||.|.||++|+..+.. ...++|+++...+
T Consensus 68 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~-------~~a~v~~~~~~~~ 140 (265)
T 2y8b_A 68 SNGLIVRDADELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRA-------AGVATYTSPLTRQ 140 (265)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHH-------TTCEEEECHHHHH
T ss_pred ceEEEEEECCeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhh-------CCCeEEECHHHHH
Confidence 5666664 5699999997521 1 2368999999999999999998764 1467999987766
Q ss_pred HHHHHHHhhhhcCCCCCceEEEE-cCCCCeEEecCCeEEEEEEcCCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVG-LDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~ 151 (288)
.+..... ... ...+.. .++++.+.++ ++++.....+|++++++|++.
T Consensus 141 ~~~~~~~-----~~~--~~~~~~~~~~~~~~~~g-~~~v~~~~pGHt~g~~~~~~~ 188 (265)
T 2y8b_A 141 LAEAAGN-----EVP--AHSLKALSSSGDVVRFG-PVEVFYPGAAHSGDNLVVYVP 188 (265)
T ss_dssp HHHHTTC-----CCC--SEECSSCSSTTEEEEET-TEEEEECCSSSSTTCCEEEET
T ss_pred HHHhccc-----ccc--cccccccCCCCcEEeec-CEEEEecCCCCCCCCEEEEec
Confidence 6543110 000 111111 2567778875 787764445999999999984
No 65
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.21 E-value=5.5e-11 Score=100.76 Aligned_cols=103 Identities=12% Similarity=0.065 Sum_probs=69.6
Q ss_pred ceeEEEeC--CceEEEeCCCCCc---c--------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 30 HETCIIFP--SLDLAFDIGRCPS---R--------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 30 ~~s~~~i~--~~~iLiD~G~~~~---~--------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
..+|+++. ++.+|||||.... . ..+|++|++||.|.||++|+..+.. . .++||+++...+
T Consensus 32 ~~n~~li~~~~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~-~------~~~v~~~~~~~~ 104 (228)
T 1jjt_A 32 PKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNS-R------SIPTYASELTNE 104 (228)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHH-T------TCCEEEEHHHHH
T ss_pred cceEEEEEECCcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHh-C------CCEEEEChHHHH
Confidence 35677765 4689999997531 0 1268999999999999999998865 1 356899877766
Q ss_pred HHHHHHHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEE-Ec-CCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAF-KT-YHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~-~~-~H~~~~~g~~i~ 151 (288)
.+.... .... . ..+ .++.+.++ +..++++ ++ +|++++++|++.
T Consensus 105 ~~~~~~-----~~~~--~---~~~-~g~~~~l~-~~~i~~~~~~pGHt~g~~~~~~~ 149 (228)
T 1jjt_A 105 LLKKDG-----KVQA--T---NSF-SGVNYWLV-KNKIEVFYPGPGHTPDNVVVWLP 149 (228)
T ss_dssp HHHHTT-----CCCC--S---EEE-CSSCCEEE-TTTEEEECCCCSSSTTCCEEEET
T ss_pred HHHhcC-----CcCc--c---ccc-cCcceEec-CceEEEEecCCCCCCCcEEEEEC
Confidence 554211 0000 1 112 25566674 6677776 54 999999999984
No 66
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.18 E-value=1.4e-11 Score=110.55 Aligned_cols=127 Identities=18% Similarity=0.203 Sum_probs=78.9
Q ss_pred eeEEEeC--CceEEEeCCCCC-----cc----c-----c---CcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCC
Q 023022 31 ETCIIFP--SLDLAFDIGRCP-----SR----A-----L---SQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVP 91 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~-----~~----~-----~---~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p 91 (288)
.+|++++ +..||||||.+. .. . + +|++|++||.|.||++|+..+.. ......++|++
T Consensus 97 ~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~----~~fp~a~v~~~ 172 (331)
T 1p9e_A 97 VTGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQ----LAFPNAVVRAD 172 (331)
T ss_dssp EEEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTE----ESSTTCEEECB
T ss_pred EEEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCccccccc----ccCCCCEEEEC
Confidence 3578775 469999999763 11 1 1 48999999999999999873311 01234689998
Q ss_pred cchHHHHHHHHHhhhhcCC--------------CCC--ceEEEEcCCCCeEEecCCeEEEEEEc-CCcCCcceEEEEEec
Q 023022 92 SCIKEDVEQLFEVHRRMDH--------------SEL--NHTLVGLDVGEEFCMRKDLFVKAFKT-YHVIQSQGYVVYSVK 154 (288)
Q Consensus 92 ~~~~~~l~~~~~~~~~~~~--------------~~~--~~~~~~l~~g~~~~i~~~~~i~~~~~-~H~~~~~g~~i~~~~ 154 (288)
+...+.+....... .... ..+ ..+++.++.++.+. .+ |+++++ +|++++++|++..+
T Consensus 173 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~--~g--i~vi~tpGHtpG~~~~~i~~~- 246 (331)
T 1p9e_A 173 QKEADFWLSQTNLD-KAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV--PG--IKALASHGHTPGHTTYVVESQ- 246 (331)
T ss_dssp HHHHHHHSCHHHHT-TCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS--TT--EEEEECTTSSTTCEEEEEEET-
T ss_pred HHHHHHHhCchhhc-cCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc--cc--EEEEEcCCCChhCEEEEEEEC-
Confidence 87765543211000 0000 000 11234566665543 35 555555 89999999999753
Q ss_pred cccchhhcCCChHHHHHHHhcCceecceEeCCeEEEecCCCCC
Q 023022 155 QKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSD 197 (288)
Q Consensus 155 ~~~~~~~~g~~~~~l~~l~~~G~~i~~~~~~~~i~y~gD~~~~ 197 (288)
+ .+++|+||+.+.
T Consensus 247 ---------------------~---------~~vlf~GD~~~~ 259 (331)
T 1p9e_A 247 ---------------------G---------QKLALLGDLILV 259 (331)
T ss_dssp ---------------------T---------EEEEECTTSCCC
T ss_pred ---------------------C---------cEEEEEECccCc
Confidence 2 479999999873
No 67
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.10 E-value=4.2e-10 Score=109.62 Aligned_cols=120 Identities=17% Similarity=0.153 Sum_probs=74.6
Q ss_pred ceeEEEeC--CceEEEeCCCCCcc-------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcch
Q 023022 30 HETCIIFP--SLDLAFDIGRCPSR-------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCI 94 (288)
Q Consensus 30 ~~s~~~i~--~~~iLiD~G~~~~~-------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~ 94 (288)
..+|+++. ++.+|||+|..... ...|++|++||.|.||++|+..|...... ....++||+++..
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~-~~~~a~V~a~~~~ 200 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQV-ASGAVQIIAPAGF 200 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHH-HTTSSEEEEETTH
T ss_pred CeEEEEEEECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhc-cCCCCEEEEchhH
Confidence 34566664 46899999986521 13589999999999999999877421000 0235689998876
Q ss_pred HHHHHH-----------H--HHhhhhcCCC----------------CC--ceEEEEc-CCCCeEEecCCeEEEEEEc-CC
Q 023022 95 KEDVEQ-----------L--FEVHRRMDHS----------------EL--NHTLVGL-DVGEEFCMRKDLFVKAFKT-YH 141 (288)
Q Consensus 95 ~~~l~~-----------~--~~~~~~~~~~----------------~~--~~~~~~l-~~g~~~~i~~~~~i~~~~~-~H 141 (288)
.+.+.. . +.....+... .. ......+ ++|+++.++ |.+++++.+ +|
T Consensus 201 ~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lg-g~~l~vi~tPGH 279 (658)
T 2cfu_A 201 MEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLD-GVPFTFQNTPGT 279 (658)
T ss_dssp HHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEET-TEEEEEEECTTS
T ss_pred HHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEEC-CEEEEEEeCCCC
Confidence 554310 0 0000000000 00 0011234 578889995 899999887 78
Q ss_pred -cCCcceEEEE
Q 023022 142 -VIQSQGYVVY 151 (288)
Q Consensus 142 -~~~~~g~~i~ 151 (288)
++++++|++.
T Consensus 280 hTpg~i~~~~p 290 (658)
T 2cfu_A 280 ESPAEMNIWLP 290 (658)
T ss_dssp SSSSBEEEEET
T ss_pred CCCCcEEEEEC
Confidence 8999999984
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.98 E-value=5.3e-11 Score=103.64 Aligned_cols=108 Identities=15% Similarity=0.058 Sum_probs=65.4
Q ss_pred eeEEEeC--CceEEEeCCCCCcc------------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPSR------------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKE 96 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~~------------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~ 96 (288)
++||++. ++.+|||+|.+... ...|++|++||.|.||++|+..|.. ..+++|+.+...+
T Consensus 75 ~N~ylv~~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~-------~~~~v~~~~~~~~ 147 (270)
T 4eyb_A 75 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHA-------AGIATYANALSNQ 147 (270)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHH-------TTCEEEEEHHHHH
T ss_pred eEEEEEEECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHH-------CCCeEEECHHHHH
Confidence 4566664 56999999975421 1358999999999999999998864 1467888776655
Q ss_pred HHHHHHHhhhhcCCCCCceE---EEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEE
Q 023022 97 DVEQLFEVHRRMDHSELNHT---LVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151 (288)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~---~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~ 151 (288)
.+... ... ....... ...++++..+..+ ++.+.....+|+++++.+++.
T Consensus 148 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~pgHT~g~~~~~~~ 199 (270)
T 4eyb_A 148 LAPQE----GMV-AAQHSLTFAANGWVEPATAPNFG-PLKVFYPGPGHTSDNITVGID 199 (270)
T ss_dssp HGGGG----TCC-CCSEEECBCTTSBBCGGGSTTCT-TEEEECCCSSSSSSCCEEEET
T ss_pred HHHhc----Ccc-ccccccCCCCceeecCceeeecC-ceeEEecccccCCCCEEEEec
Confidence 44311 000 0000000 0112333334442 555444445899999988884
No 69
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.95 E-value=6.4e-10 Score=92.37 Aligned_cols=97 Identities=12% Similarity=0.068 Sum_probs=67.5
Q ss_pred eeEEEeC--CceEEEeCCCCCcc-------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcchHHHHHHH
Q 023022 31 ETCIIFP--SLDLAFDIGRCPSR-------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQL 101 (288)
Q Consensus 31 ~s~~~i~--~~~iLiD~G~~~~~-------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~~~~l~~~ 101 (288)
.+|+++. ++.+|||||..... .-+|++|++||. ||++|+..+.+.. +.++|+++...+.+.
T Consensus 24 ~n~~li~~~~~~iliD~g~~~~~~~~~l~~~g~i~~ii~TH~--DH~gg~~~~~~~~------~a~v~~~~~~~~~~~-- 93 (201)
T 2p97_A 24 FNGFAWIRPEGNILIDPVALSNHDWKHLESLGGVVWIVLTNS--DHVRSAKEIADQT------YTKIAGPVAEKENFP-- 93 (201)
T ss_dssp EEEEEECCTTCCEEESCCCCCHHHHHHHHHTTCCSEEECSSG--GGCTTHHHHHHHS------CCEEEEEGGGTTSCS--
T ss_pred eeEEEEEeCCeeEEEECCCCcHHHHHHHHhcCCCCEEEECCc--hhhhhHHHHHHhc------CCEEEEcHhHhhhhc--
Confidence 6677775 46999999954321 127999999999 9999999887632 367888876533221
Q ss_pred HHhhhhcCCCCCceEEEEcCCCCeEEecCCeEEEEEEcCCcCCcceEEEE
Q 023022 102 FEVHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVY 151 (288)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~l~~g~~~~i~~~~~i~~~~~~H~~~~~g~~i~ 151 (288)
.. ....+.+|+.+. .++++...|.+|++++++|++.
T Consensus 94 --------~~----~~~~~~~g~~~~--~~~~~~~~p~gHt~g~~~~~~~ 129 (201)
T 2p97_A 94 --------IY----CDRWLSDGDELV--PGLKVMELQGSKTPGELALLLE 129 (201)
T ss_dssp --------SC----CSEEECTTCBSS--TTEEEEEECSSSSTTEEEEEET
T ss_pred --------cc----CceecCCCCEEc--ceEEEEECCCCCCCCcEEEEEc
Confidence 00 024566676553 3677777777899999999883
No 70
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.47 E-value=9.6e-11 Score=113.87 Aligned_cols=122 Identities=13% Similarity=0.110 Sum_probs=73.5
Q ss_pred CceeEEEeC--CceEEEeCCCCCc---c----------ccCcCEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcc
Q 023022 29 GHETCIIFP--SLDLAFDIGRCPS---R----------ALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSC 93 (288)
Q Consensus 29 ~~~s~~~i~--~~~iLiD~G~~~~---~----------~~~i~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~ 93 (288)
+..+|+++. ++.+|||||.... . ...|++|++||.|.||++|+..+...... ....++||+++.
T Consensus 131 ~~~N~~lI~~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~-~~~~a~I~a~~~ 209 (668)
T 2yhe_A 131 DPANMTIIEGDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADV-KAGKVKVFAPSG 209 (668)
Confidence 345677775 4589999997542 1 12488999999999999999988642100 112456787776
Q ss_pred hHHH--HHHHH---------Hhhhh--cCC-----------------C--C-CceEEEEcCCCCeEEecCCeEEEEEEc-
Q 023022 94 IKED--VEQLF---------EVHRR--MDH-----------------S--E-LNHTLVGLDVGEEFCMRKDLFVKAFKT- 139 (288)
Q Consensus 94 ~~~~--l~~~~---------~~~~~--~~~-----------------~--~-~~~~~~~l~~g~~~~i~~~~~i~~~~~- 139 (288)
..+. ..... ..... +.. . . .......+++|+++.++ |.+++++.+
T Consensus 210 ~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lg-g~~l~vi~tP 288 (668)
T 2yhe_A 210 FMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVD-GVELEFQLTL 288 (668)
Confidence 4221 11100 00000 000 0 0 00122234578889995 899999877
Q ss_pred C-CcCCcceEEEEE
Q 023022 140 Y-HVIQSQGYVVYS 152 (288)
Q Consensus 140 ~-H~~~~~g~~i~~ 152 (288)
+ |+++++++++..
T Consensus 289 G~Htpg~i~~~~p~ 302 (668)
T 2yhe_A 289 GSEAPSDMNIYLPQ 302 (668)
Confidence 5 999999999853
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.65 E-value=1.9e-07 Score=80.78 Aligned_cols=56 Identities=25% Similarity=0.440 Sum_probs=40.1
Q ss_pred cCceeEEEeCCceEEEeCCCCCc--c---c--cCc-CEEEEecCChhhhCcHHHHHHHhCCCCCCCCEEeCCcch
Q 023022 28 AGHETCIIFPSLDLAFDIGRCPS--R---A--LSQ-NFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCI 94 (288)
Q Consensus 28 ~~~~s~~~i~~~~iLiD~G~~~~--~---~--~~i-~~I~iTH~H~DH~~gl~~ll~~~~~~~~~~~~i~~p~~~ 94 (288)
+....|++++. +|||||.... + . +++ ++|++||.|.||++|++.+ ...+||+++..
T Consensus 29 ~~~G~s~lie~--iLiD~G~~~~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l---------~~~~v~~~~~~ 92 (267)
T 3h3e_A 29 SEHGFSVLVDS--VLFDTGKSDVFLKNARKLGIDLPKDVLISHGHYDHAGGLLYL---------SGKRVWLRKEA 92 (267)
T ss_dssp CCSSCEEEETT--EEECCCSSSHHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC---------CSCEEEEEGGG
T ss_pred eCcEeHHeeee--EEEECCCcHHHHHHHHHCCcCcCCEEEECCCChhhhCCHHHh---------cCCEEEECHHH
Confidence 34566788866 9999998742 1 1 233 9999999999999999877 23456665543
No 72
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=36.17 E-value=24 Score=30.83 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=24.0
Q ss_pred cCCCcHHHHHHHHHHcCCCeEEEEe
Q 023022 232 YGHTHLSEIVEYAEKFENKAILLIH 256 (288)
Q Consensus 232 ~~H~~~~~~~~~~~~~~~~~~~l~H 256 (288)
.+|++.+|+.++.+..+++.++.+|
T Consensus 275 S~Ha~~~EL~~~~~~~~P~~~iPvh 299 (336)
T 3zdk_A 275 SDHSSYSELRAFVAALKPCQVVPIV 299 (336)
T ss_dssp CSSCBHHHHHHHHHHHCCSCEEESC
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 5799999999999999999999999
No 73
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=26.38 E-value=42 Score=29.59 Aligned_cols=27 Identities=11% Similarity=0.179 Sum_probs=25.1
Q ss_pred CCCcHHHHHHHHHHcCCCeEEEEeccC
Q 023022 233 GHTHLSEIVEYAEKFENKAILLIHFSA 259 (288)
Q Consensus 233 ~H~~~~~~~~~~~~~~~~~~~l~H~~~ 259 (288)
.|+++.|+.+++..+++++++.||-..
T Consensus 320 eHss~~EL~~fv~~l~p~~iiptv~~~ 346 (367)
T 4b87_A 320 EHSSYLEMKRFVQWLKPQKIIPTVNVG 346 (367)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECSSCS
T ss_pred CCCCHHHHHHHHHhcCCCeEECeecCC
Confidence 599999999999999999999999764
No 74
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=25.91 E-value=47 Score=29.54 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=26.7
Q ss_pred cCCCcHHHHHHHHHHcCCCeEEEEeccCC
Q 023022 232 YGHTHLSEIVEYAEKFENKAILLIHFSAR 260 (288)
Q Consensus 232 ~~H~~~~~~~~~~~~~~~~~~~l~H~~~~ 260 (288)
++|.+.+++.++.+..+|+.++++|=..+
T Consensus 380 SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~ 408 (429)
T 2az4_A 380 SGHAIPEDLDKIIALIEPQVLVPIHTLKP 408 (429)
T ss_dssp CSSCCHHHHHHHHHHHCCSEEEEESCSCG
T ss_pred cCCCCHHHHHHHHHhhCCCEEEECCCCch
Confidence 57999999999999999999999998765
No 75
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=25.65 E-value=50 Score=29.83 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=25.2
Q ss_pred cCCCcHHHHHHHHHHcCCCeEEEEeccC
Q 023022 232 YGHTHLSEIVEYAEKFENKAILLIHFSA 259 (288)
Q Consensus 232 ~~H~~~~~~~~~~~~~~~~~~~l~H~~~ 259 (288)
..|....++.++++..++++++++|=.+
T Consensus 394 S~Had~~~l~~~i~~~~p~~v~~vHGe~ 421 (459)
T 2i7t_A 394 SAHTDYQQTSEFIRALKPPHVILVHGEQ 421 (459)
T ss_dssp SCCCCHHHHHHHHHHHCCSEEEEESSCH
T ss_pred cccCCHHHHHHHHHhcCCCeEEEeCCCH
Confidence 5799999999999999999999999544
No 76
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=25.25 E-value=2.1e+02 Score=22.48 Aligned_cols=62 Identities=8% Similarity=0.010 Sum_probs=38.4
Q ss_pred EEEecCCCCCccccccccccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcCCCeEEEE
Q 023022 188 VAFTGDTMSDFIVDEANIDVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFENKAILLI 255 (288)
Q Consensus 188 i~y~gD~~~~~~~~~~~~~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~l~ 255 (288)
.++.+|.. + .....+.++|.+|+-+....... ........-.....+++.+++.+.++++.+
T Consensus 68 ~~~~~Dl~-~----~~~~~~~~~D~vi~~ag~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 129 (236)
T 3e8x_A 68 DIVVANLE-E----DFSHAFASIDAVVFAAGSGPHTG-ADKTILIDLWGAIKTIQEAEKRGIKRFIMV 129 (236)
T ss_dssp EEEECCTT-S----CCGGGGTTCSEEEECCCCCTTSC-HHHHHHTTTHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEcccH-H----HHHHHHcCCCEEEECCCCCCCCC-ccccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 56678887 2 22345678999999887654321 233333333345567777777787887764
No 77
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=23.42 E-value=62 Score=29.33 Aligned_cols=63 Identities=16% Similarity=0.104 Sum_probs=40.2
Q ss_pred ccCCCCEEEEecccCCCCCcHHHHhhcCCCcHHHHHHHHHHcC---CCeEEEEeccCCCC------hhHHHHHHHhCCCc
Q 023022 206 DVLRARILVMESTYVDDSTTVEQARDYGHTHLSEIVEYAEKFE---NKAILLIHFSARHK------VDEIRRAVDAVPAP 276 (288)
Q Consensus 206 ~~~~~d~li~E~t~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~---~~~~~l~H~~~~~~------~~~~~~~~~~~~~~ 276 (288)
+..++|++++|+.- .+++++.+++++.+ +.+++.+-.+|.|+ ++++.++.+++..-
T Consensus 280 Y~~GAD~if~E~~~---------------~~~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~l 344 (435)
T 3lg3_A 280 YAPYADLVWCETST---------------PDLALAKRFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAM 344 (435)
T ss_dssp HGGGCSEEEECCSS---------------CCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHT
T ss_pred HHccCCEEEecCCC---------------CCHHHHHHHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHc
Confidence 45589999998732 35666666666554 56677777888765 55666655555544
Q ss_pred ccceeee
Q 023022 277 LAGRVFA 283 (288)
Q Consensus 277 ~~~~~~~ 283 (288)
....++.
T Consensus 345 G~~~v~~ 351 (435)
T 3lg3_A 345 GYKYQFI 351 (435)
T ss_dssp TEEEEEE
T ss_pred CCcEEEe
Confidence 4444443
Done!