Query 023025
Match_columns 288
No_of_seqs 117 out of 498
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 07:53:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023025.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023025hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03619 Solute_trans_a: Organ 100.0 3.6E-77 7.8E-82 548.8 28.8 265 4-275 1-274 (274)
2 KOG2641 Predicted seven transm 100.0 4.1E-71 8.8E-76 521.7 27.7 273 3-283 32-309 (386)
3 KOG3979 FGF receptor activatin 53.8 93 0.002 29.3 8.7 83 4-94 173-258 (296)
4 COG2864 FdnI Cytochrome b subu 40.8 1.2E+02 0.0025 27.4 7.0 58 2-62 111-168 (218)
5 COG1006 MnhC Multisubunit Na+/ 39.3 50 0.0011 26.7 4.0 78 210-287 25-113 (115)
6 PF00558 Vpu: Vpu protein; In 37.3 47 0.001 25.2 3.4 25 19-45 18-42 (81)
7 PF04544 Herpes_UL20: Herpesvi 34.9 2.2E+02 0.0048 24.8 7.6 70 140-211 28-98 (179)
8 PRK10764 potassium-tellurite e 25.9 3.3E+02 0.0073 25.5 7.9 57 5-61 163-219 (324)
9 KOG3088 Secretory carrier memb 23.0 2.8E+02 0.0061 26.1 6.5 19 214-232 201-219 (313)
10 PF13850 ERGIC_N: Endoplasmic 22.7 63 0.0014 24.9 2.0 29 11-39 22-50 (96)
11 PF14333 DUF4389: Domain of un 22.5 1.1E+02 0.0025 22.7 3.3 24 38-61 2-25 (80)
12 COG5264 VTC1 Vacuolar transpor 22.1 1.5E+02 0.0032 24.4 4.0 30 3-32 56-85 (126)
13 PRK11056 hypothetical protein; 21.4 4.5E+02 0.0098 21.4 8.8 53 13-65 38-90 (120)
No 1
>PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function.
Probab=100.00 E-value=3.6e-77 Score=548.76 Aligned_cols=265 Identities=39% Similarity=0.688 Sum_probs=244.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q 023025 4 ARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEAL 83 (288)
Q Consensus 4 ~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~~~~s~~~~~y~~~ird~YeA~ 83 (288)
|++++++||+|+++|+++|+++|++|++||++|++||+++||++|+|+||++||+|+++||++ +|+|++||+|||+
T Consensus 1 ~~~~~~ia~~~~~~~~~is~~~i~~hl~~y~~P~~Qr~iirIl~m~Piyai~S~~sl~~p~~~----~~~~~ir~~Yea~ 76 (274)
T PF03619_consen 1 HTWAWIIAGIFALLTILISLFLIYQHLRNYSKPEEQRYIIRILLMVPIYAICSLLSLLFPRAA----IYLDFIRDCYEAF 76 (274)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999865 6999999999999
Q ss_pred HHHHHHHHHHHhcCCccccccccccccCc-ccccCCccc--cccccccccChhhHHHHhhHhhhhHHHHHHHHHHHHHHH
Q 023025 84 VIAKFLALLYSYLNISISKNIVPDEIKGR-EIHHSFPMT--LFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ 160 (288)
Q Consensus 84 vly~Ff~Ll~~ylGg~~~~~~~~~~~~~~-~~~~~~P~~--~~~p~~~~~~~~~l~~~k~~vlQy~ivkPl~~i~~ii~~ 160 (288)
++|+|+.|+++|+||+++ ..+.++++ +++|+||+| ||++++.+.|++++|+||+||+||+++||++++++++++
T Consensus 77 ~ly~F~~Ll~~y~gg~~~---~~~~l~~~~~~~~~~P~~~~~~c~~~~~~~~~~l~~~k~~VlQ~~vvrpl~~~i~iil~ 153 (274)
T PF03619_consen 77 VLYSFFSLLLNYLGGEEA---LVEVLSGKPPIKHPWPCCCCCCCLPPWPMTKRFLRRCKWGVLQYVVVRPLLSIISIILE 153 (274)
T ss_pred HHHHHHHHHHHHhCCHHH---HHHHhhcCCCCCCCCcccccccCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999742 33444444 467999983 344445788999999999999999999999999999999
Q ss_pred HhCcCCC------chHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHcCcc
Q 023025 161 LLGLYSN------WISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVALGVI 234 (288)
Q Consensus 161 ~~g~Y~~------~~~~~i~ii~niS~~~Aly~L~~Fy~~~k~~L~~~~P~~KFl~iK~vvflsfwQ~~ii~iL~~~g~i 234 (288)
..|.|++ .+..|+++++|+|+++|+|||.+||+++|++|+|+||++||+|+|+|+|++|||+++++++.+.|++
T Consensus 154 ~~g~y~~~~~~~~~~~~~l~ii~~iS~~~Aly~L~~fy~~~~~~L~~~~p~~KF~~iK~vvfl~f~Q~~ii~iL~~~g~i 233 (274)
T PF03619_consen 154 AFGVYCEGSFSPHSAYLYLTIINNISVTLALYGLVIFYRATKEELKPYRPLLKFLCIKLVVFLSFWQGFIISILASFGVI 233 (274)
T ss_pred HHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9999985 2467899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHhhHHHHHHHHHHHHHhhhccccccC
Q 023025 235 KSHHFWLDVEHVEEALQNALVCVEMVFFAAFQRYAYSAKPY 275 (288)
Q Consensus 235 ~~~~~~~~~~~~~~~i~~~Lic~EM~~~ai~~~~aF~~~~Y 275 (288)
++++++.+.+|+++++||+|+|+||+++|++|++|||++||
T Consensus 234 ~~~~~~~~~~~~~~~i~~~LicvEM~i~ai~~~~af~~~~y 274 (274)
T PF03619_consen 234 PCTPPWSSPEDIASGIQNFLICVEMFIFAILHRYAFPYSPY 274 (274)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99998544459999999999999999999999999999998
No 2
>KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-71 Score=521.71 Aligned_cols=273 Identities=40% Similarity=0.673 Sum_probs=250.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhHHHHHHHHHHhhccccchhHHHHHHHHHHHHHH
Q 023025 3 PARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEA 82 (288)
Q Consensus 3 ~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~~~~s~~~~~y~~~ird~YeA 82 (288)
.+.+++.+|+.++++++.+|+.||++|++||++|++||+|+||++|+||||+.||+|+..|+. ++|+|++||||||
T Consensus 32 ~~~~~~~~a~~f~vit~~ls~~~I~~HL~~y~~P~~qr~iv~il~mvPIys~~S~vsl~~p~~----~~~~~~vr~~Yea 107 (386)
T KOG2641|consen 32 LLTVALAIASFFVVITILLSLFHIYQHLRYYSNPREQRPIVRILFMVPIYSVASFVSLLVPRV----AFYLDTVRECYEA 107 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhchhhhhhhhhHHHHHHHHHHHhccch----hhhHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999999983 3799999999999
Q ss_pred HHHHHHHHHHHHhcCCccccccccccccCcc--cccCCccccccccccccChhhHHHHhhHhhhhHHHHHHHHHHHHHHH
Q 023025 83 LVIAKFLALLYSYLNISISKNIVPDEIKGRE--IHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ 160 (288)
Q Consensus 83 ~vly~Ff~Ll~~ylGg~~~~~~~~~~~~~~~--~~~~~P~~~~~p~~~~~~~~~l~~~k~~vlQy~ivkPl~~i~~ii~~ 160 (288)
+|+|+|++||.+|+||+. +. ..+++|+. ..|++|+|||.|...+++++++|+||+||+||+++||++++++++++
T Consensus 108 f~ly~F~sLl~~ylGGe~--~~-v~~l~~~~~~~~~~~P~cc~~~p~~~~~~~~lr~~K~~vlQ~~ivkp~~~lv~lvl~ 184 (386)
T KOG2641|consen 108 FVLYVFLSLLFHYLGGEQ--NI-VTELEGRLIRVNHTPPFCCFFPPTVRLTPKFLRRCKQGVLQYPIVKPFLALVTLVLY 184 (386)
T ss_pred HHHHHHHHHHHHHcCChH--HH-HHHHhccCCcccCCCCceeccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999973 33 34566665 46999999998876779999999999999999999999999999999
Q ss_pred HhCcCCCc-hH--HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHcCccccC
Q 023025 161 LLGLYSNW-IS--WTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQGIVLDILVALGVIKSH 237 (288)
Q Consensus 161 ~~g~Y~~~-~~--~~i~ii~niS~~~Aly~L~~Fy~~~k~~L~~~~P~~KFl~iK~vvflsfwQ~~ii~iL~~~g~i~~~ 237 (288)
+.|.|+++ .. +|+++++|+|+++|+|||.+||+++||+|+||||++||+|+|++||+++|||+++.++.+.|.+++.
T Consensus 185 ~~g~y~~g~~~~~~~~~~i~n~S~~lalY~L~~fy~~~~~~L~py~p~~KF~~vk~ivf~~~wQg~vi~~l~~~g~~~~~ 264 (386)
T KOG2641|consen 185 AFGVYDDGDFSVYLYLTIIYNCSVSLALYSLVLFYTVTKDELSPYQPVVKFLCVKLIVFLSFWQGIVLAILVKLGKIGPS 264 (386)
T ss_pred HhcccccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 99999964 34 5789999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCHHHHHHHHhhHHHHHHHHHHHHHhhhccccccCccccccch
Q 023025 238 HFWLDVEHVEEALQNALVCVEMVFFAAFQRYAYSAKPYRDESSATS 283 (288)
Q Consensus 238 ~~~~~~~~~~~~i~~~Lic~EM~~~ai~~~~aF~~~~Y~~~~~~~~ 283 (288)
..+ ..+..+.++||+++|+||+++|++|+||||+++|...++.+.
T Consensus 265 ~~~-~~~~~~~~iQnfiiciEM~i~ai~~~~af~~~~ya~~~~~~~ 309 (386)
T KOG2641|consen 265 YFD-EVGTVAYGIQNFLICIEMLIAAIAHFYAFPAAPYALFDERSC 309 (386)
T ss_pred cch-hHHHHHHHhhhhHHHHHHHHHHHHHHHhCCcchhcccccccc
Confidence 542 245789999999999999999999999999999988877763
No 3
>KOG3979 consensus FGF receptor activating protein 1 [Signal transduction mechanisms]
Probab=53.77 E-value=93 Score=29.26 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHH---HHHHhHHHHHHHHHHhhccccchhHHHHHHHHHHHH
Q 023025 4 ARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIII---IILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECY 80 (288)
Q Consensus 4 ~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiR---Il~mvPiyai~S~lsl~~~~~s~~~~~y~~~ird~Y 80 (288)
|...+.+=++|...-...|..++.-|.++|..|+-|+..-| .....+.-+..+...+. +. -+|.++- .|
T Consensus 173 ha~~Fg~f~ic~~~~ml~s~il~~~~~~~y~~~~g~~s~~~kil~~lv~~~~~~s~~~~~~--~~----~~~C~~~--ay 244 (296)
T KOG3979|consen 173 HALGFGVFLICSHILMLDSTILFTWTWKGYVSPHGPLSWRWKILTFLVMVFSFPSGAIFYI--RH----NVYCEPG--AY 244 (296)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcCCCcceeehhhHHHHHHHHHHHHHHHHH--Hh----hhhhhhh--HH
Confidence 45555555666555567888888999999999998886633 33333333333333332 21 1355544 68
Q ss_pred HHHHHHHHHHHHHH
Q 023025 81 EALVIAKFLALLYS 94 (288)
Q Consensus 81 eA~vly~Ff~Ll~~ 94 (288)
+.++|+.+-+-.++
T Consensus 245 ~~fAi~ey~sV~~n 258 (296)
T KOG3979|consen 245 TLFAILEYSSVFLN 258 (296)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888877666555
No 4
>COG2864 FdnI Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]
Probab=40.78 E-value=1.2e+02 Score=27.39 Aligned_cols=58 Identities=9% Similarity=0.134 Sum_probs=48.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhHHHHHHHHHHhhc
Q 023025 2 NPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLID 62 (288)
Q Consensus 2 ~~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~ 62 (288)
|.+|-.++.+.+...+.+.+|...| .+-|..|..++..+|+-.+++..+..++...+.
T Consensus 111 n~GqKl~fw~~~l~~~~l~iTGivm---w~~y~~~~~~i~~~r~s~l~h~~~a~~l~~~~~ 168 (218)
T COG2864 111 NAGQKLLFWTAILAIVLLLITGIVI---WRPYFAPYFSIPLLRLSLLLHAFAAVILIFIII 168 (218)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHH---HhhhccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777778888888877 588999999999999999999999888887763
No 5
>COG1006 MnhC Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism]
Probab=39.34 E-value=50 Score=26.71 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCccccC-CCCCCHH-----HHHHHHhhHH----HHHHHHHHHHHhhhccc-cccCccc
Q 023025 210 CIKGIVFFCFWQGIVLDILVALGVIKSH-HFWLDVE-----HVEEALQNAL----VCVEMVFFAAFQRYAYS-AKPYRDE 278 (288)
Q Consensus 210 ~iK~vvflsfwQ~~ii~iL~~~g~i~~~-~~~~~~~-----~~~~~i~~~L----ic~EM~~~ai~~~~aF~-~~~Y~~~ 278 (288)
.+|.++.++..+.-+.-++...|-.+.. ++-.+.+ +-++-+++-| |.+.+...|++-..+++ |++|...
T Consensus 25 lik~iigl~i~~~~vnL~i~~~G~~~~~~~Pi~~~~~~~~~~~aDPlPQALILTAIVIgfa~tal~L~l~~~~y~~~~T~ 104 (115)
T COG1006 25 LIKKIIGLSLIGTGVNLFLLLIGYLTGGGPPILSGGLVDATTYVDPLPQALILTAIVIGFATTALALVLAYRAYKEYGTL 104 (115)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhccccCCCCCCCCcccccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 4699999999999998888887766443 2212221 2222333333 34666666666666665 6677777
Q ss_pred cccchhccc
Q 023025 279 SSATSDKKK 287 (288)
Q Consensus 279 ~~~~~~~~~ 287 (288)
+.+..++.+
T Consensus 105 ~~~~~~~~~ 113 (115)
T COG1006 105 DVDELRRER 113 (115)
T ss_pred cHHHhhccc
Confidence 666655544
No 6
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=37.33 E-value=47 Score=25.20 Aligned_cols=25 Identities=16% Similarity=0.270 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHH
Q 023025 19 THFSTQLLSEHFLSWKKPKEQKAIIII 45 (288)
Q Consensus 19 ~~is~~~i~~Hl~~y~~P~~Qr~iiRI 45 (288)
+.+-.|.+ -+..|.+-.+||+|-|.
T Consensus 18 iaIvvW~i--v~ieYrk~~rqrkId~l 42 (81)
T PF00558_consen 18 IAIVVWTI--VYIEYRKIKRQRKIDRL 42 (81)
T ss_dssp HHHHHHHH--H------------CHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHhHHHH
Confidence 33444444 68999999999988764
No 7
>PF04544 Herpes_UL20: Herpesvirus egress protein UL20; InterPro: IPR007629 UL20 is predicted to be a transmembrane protein with multiple membrane spans. It is involved in the trans-cellular transport of enveloped virions, and is therefore important for viral egress. However, UL20 operates in different cellular compartments and different stages of egress in Suid herpesvirus 1 (Pseudorabies virus) and herpes simplex virus. This is thought to be due to differences in egress pathways between these two viruses [].; GO: 0019067 viral assembly, maturation, egress, and release
Probab=34.91 E-value=2.2e+02 Score=24.80 Aligned_cols=70 Identities=10% Similarity=0.103 Sum_probs=43.0
Q ss_pred hHhhhhHHHHHHHHHHHHHH-HHhCcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCCCcchhhHH
Q 023025 140 DWTWQFVVIRPVCSILMIAL-QLLGLYSNWISWTFTIILNISVSLALYSLVIFYHVFAKELAPHKPLSKFLCI 211 (288)
Q Consensus 140 ~~vlQy~ivkPl~~i~~ii~-~~~g~Y~~~~~~~i~ii~niS~~~Aly~L~~Fy~~~k~~L~~~~P~~KFl~i 211 (288)
...+-..++||++.++-..- ..+|.+.- .....++..+...--+......|+..|.|+-|.++..|++.-
T Consensus 28 ~f~~Sal~lKPlCCl~f~~Yy~~tg~~~~--~~~~~~~T~~yY~~l~l~~~~~Y~NIk~DrLPL~~~qq~~~g 98 (179)
T PF04544_consen 28 FFWISALVLKPLCCLIFLWYYRCTGDSRF--FICGLAITAAYYMRLALMAFFLYRNIKRDRLPLSTPQQWILG 98 (179)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcHHHHHHHH
Confidence 45577889999999765442 23444321 001122222332233445778899999999999999888754
No 8
>PRK10764 potassium-tellurite ethidium and proflavin transporter; Provisional
Probab=25.92 E-value=3.3e+02 Score=25.48 Aligned_cols=57 Identities=12% Similarity=0.088 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhHHHHHHHHHHhh
Q 023025 5 RVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLI 61 (288)
Q Consensus 5 ~~~~~~ag~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~ 61 (288)
+.+...-|+..++.+++-.-..+|=..|=.-|+.+|..+.|..-+|-.+..+++++-
T Consensus 163 ~~~~~~fg~G~~~~l~l~~i~~~Rl~~~~~lp~~~~P~l~I~lAP~~~~~~a~l~~~ 219 (324)
T PRK10764 163 DAGLLFLGAGVFSWLSLEPVILQRLRSSGELPTALRPSLGIQLAPAFVGCSAYLSVN 219 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHhhHHHHHHHHHHHc
Confidence 344555555455555444333444446666788999999999999999999999985
No 9
>KOG3088 consensus Secretory carrier membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.97 E-value=2.8e+02 Score=26.14 Aligned_cols=19 Identities=32% Similarity=0.676 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q 023025 214 IVFFCFWQGIVLDILVALG 232 (288)
Q Consensus 214 vvflsfwQ~~ii~iL~~~g 232 (288)
+.|++|.=.+++.++...|
T Consensus 201 ~FFF~y~~q~~~~v~qAvg 219 (313)
T KOG3088|consen 201 AFFFTYFFQIVFCVFQAVG 219 (313)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 3667777777888887777
No 10
>PF13850 ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
Probab=22.68 E-value=63 Score=24.88 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q 023025 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQ 39 (288)
Q Consensus 11 ag~~~~l~~~is~~~i~~Hl~~y~~P~~Q 39 (288)
+|+.++++.++..+++...+.+|-+|+..
T Consensus 22 Gg~iSi~~~~~~~~L~~~E~~~y~~~~~~ 50 (96)
T PF13850_consen 22 GGIISIITIVLIVILFISELYSYLSGEIK 50 (96)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHccccee
Confidence 57778888889999999999999999654
No 11
>PF14333 DUF4389: Domain of unknown function (DUF4389)
Probab=22.46 E-value=1.1e+02 Score=22.71 Aligned_cols=24 Identities=17% Similarity=0.373 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHhh
Q 023025 38 EQKAIIIIILMAPIYAIDSYVGLI 61 (288)
Q Consensus 38 ~Qr~iiRIl~mvPiyai~S~lsl~ 61 (288)
.+....|+++|+|.+-+.+..+..
T Consensus 2 r~~~~~R~l~mi~~~ivl~~~~~~ 25 (80)
T PF14333_consen 2 REAVWLRLLLMIPFAIVLSLASIV 25 (80)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466789999999998777776654
No 12
>COG5264 VTC1 Vacuolar transporter chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=22.10 E-value=1.5e+02 Score=24.36 Aligned_cols=30 Identities=13% Similarity=0.089 Sum_probs=24.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 023025 3 PARVTFMAATVCVMLTTHFSTQLLSEHFLS 32 (288)
Q Consensus 3 ~~~~~~~~ag~~~~l~~~is~~~i~~Hl~~ 32 (288)
.++++.+.|++++++|+..++|...-|+++
T Consensus 56 ~~~~g~~~a~vftivaif~~~ya~~lY~kR 85 (126)
T COG5264 56 GDRLGMISAYVFTIVAIFCGFYALMLYLKR 85 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788888888888888888888877765
No 13
>PRK11056 hypothetical protein; Provisional
Probab=21.40 E-value=4.5e+02 Score=21.39 Aligned_cols=53 Identities=8% Similarity=0.155 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhHHHHHHHHHHhhcccc
Q 023025 13 VCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQG 65 (288)
Q Consensus 13 ~~~~l~~~is~~~i~~Hl~~y~~P~~Qr~iiRIl~mvPiyai~S~lsl~~~~~ 65 (288)
+|-++++++|.|..+|+..|.+.|+.--....-.+.+=+++-..++-.-.|+.
T Consensus 38 iFPlIaLvLavycLyQ~Yl~~~m~eg~P~~a~acFflG~f~ySA~vraeyPei 90 (120)
T PRK11056 38 IFPLIALVLAVYCLHQRYLNRPMPEGLPGLAAACFFLGVFLYSAFVRAEYPEI 90 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 45678999999999999999999987666666666666666656555555543
Done!