Query 023030
Match_columns 288
No_of_seqs 181 out of 1240
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 07:56:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023030.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023030hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2.5E-60 5.4E-65 438.1 20.9 259 1-288 184-450 (454)
2 PLN02213 sinapoylglucose-malat 100.0 6.3E-59 1.4E-63 419.4 22.5 253 1-288 67-319 (319)
3 PLN03016 sinapoylglucose-malat 100.0 4.8E-57 1E-61 419.8 21.9 253 1-288 181-433 (433)
4 PLN02209 serine carboxypeptida 100.0 6.4E-56 1.4E-60 412.3 21.6 255 1-288 183-437 (437)
5 PF00450 Peptidase_S10: Serine 100.0 4.4E-52 9.5E-57 388.0 13.2 252 1-285 152-415 (415)
6 PTZ00472 serine carboxypeptida 100.0 6.1E-51 1.3E-55 383.0 20.2 244 2-288 188-461 (462)
7 KOG1283 Serine carboxypeptidas 100.0 2.5E-31 5.3E-36 229.3 3.6 258 2-284 139-412 (414)
8 COG2939 Carboxypeptidase C (ca 99.9 5.4E-26 1.2E-30 208.7 9.2 242 2-285 215-490 (498)
9 TIGR03343 biphenyl_bphD 2-hydr 97.5 0.00034 7.4E-09 61.4 8.0 61 195-284 221-281 (282)
10 TIGR01738 bioH putative pimelo 97.3 0.00086 1.9E-08 56.5 7.0 60 195-283 186-245 (245)
11 PRK03204 haloalkane dehalogena 97.3 0.00056 1.2E-08 60.8 6.0 59 197-284 227-286 (286)
12 PRK10349 carboxylesterase BioH 97.2 0.0012 2.6E-08 57.3 7.2 61 195-284 194-254 (256)
13 PRK10673 acyl-CoA esterase; Pr 97.2 0.001 2.2E-08 57.3 6.7 60 197-285 195-254 (255)
14 TIGR02427 protocat_pcaD 3-oxoa 97.2 0.0014 3.1E-08 55.3 7.5 60 196-284 192-251 (251)
15 TIGR03611 RutD pyrimidine util 97.1 0.0013 2.8E-08 56.1 6.7 60 196-284 197-256 (257)
16 TIGR03056 bchO_mg_che_rel puta 97.1 0.0012 2.7E-08 57.3 6.6 59 197-284 220-278 (278)
17 PRK00870 haloalkane dehalogena 97.1 0.0014 3E-08 58.5 6.8 70 191-287 233-302 (302)
18 PLN02679 hydrolase, alpha/beta 97.0 0.0015 3.3E-08 60.1 6.5 66 196-286 291-357 (360)
19 PRK07581 hypothetical protein; 97.0 0.0024 5.2E-08 58.0 7.5 60 196-284 274-334 (339)
20 PLN03084 alpha/beta hydrolase 96.9 0.002 4.3E-08 59.9 6.6 58 197-284 325-382 (383)
21 TIGR01250 pro_imino_pep_2 prol 96.9 0.0034 7.3E-08 54.3 7.1 63 192-284 226-288 (288)
22 PLN02824 hydrolase, alpha/beta 96.9 0.0026 5.6E-08 56.4 6.4 61 196-285 233-293 (294)
23 PRK03592 haloalkane dehalogena 96.8 0.0015 3.2E-08 58.0 4.7 62 197-286 228-289 (295)
24 PRK08775 homoserine O-acetyltr 96.8 0.0021 4.5E-08 58.7 5.1 61 197-285 277-338 (343)
25 PHA02857 monoglyceride lipase; 96.7 0.0039 8.5E-08 54.6 6.4 63 196-286 208-273 (276)
26 KOG1454 Predicted hydrolase/ac 96.7 0.0041 8.8E-08 56.6 6.4 60 197-285 264-323 (326)
27 PLN02965 Probable pheophorbida 96.7 0.0044 9.5E-08 53.8 6.2 60 196-284 192-251 (255)
28 KOG4178 Soluble epoxide hydrol 96.6 0.0034 7.4E-08 56.1 5.3 63 195-285 256-319 (322)
29 TIGR02240 PHA_depoly_arom poly 96.6 0.0048 1E-07 54.2 6.0 60 196-285 206-265 (276)
30 PLN02578 hydrolase 96.4 0.011 2.4E-07 54.1 7.4 60 196-285 295-354 (354)
31 PLN03087 BODYGUARD 1 domain co 96.3 0.013 2.9E-07 56.0 7.6 66 191-285 411-478 (481)
32 PRK00175 metX homoserine O-ace 96.1 0.011 2.4E-07 54.8 6.0 65 197-286 309-374 (379)
33 PLN02385 hydrolase; alpha/beta 96.1 0.011 2.4E-07 54.0 5.8 62 197-285 279-344 (349)
34 TIGR01392 homoserO_Ac_trn homo 96.0 0.011 2.3E-07 54.1 5.2 63 197-284 288-351 (351)
35 PLN02894 hydrolase, alpha/beta 95.9 0.016 3.5E-07 54.2 6.2 59 197-284 325-383 (402)
36 PF12697 Abhydrolase_6: Alpha/ 95.9 0.015 3.2E-07 48.0 5.3 53 196-277 175-227 (228)
37 PRK06765 homoserine O-acetyltr 95.9 0.028 6.1E-07 52.4 7.6 67 195-286 321-388 (389)
38 PLN02298 hydrolase, alpha/beta 95.9 0.017 3.7E-07 52.2 6.0 62 196-284 250-315 (330)
39 PRK11126 2-succinyl-6-hydroxy- 95.7 0.027 5.8E-07 48.1 6.3 54 196-284 187-240 (242)
40 PF08386 Abhydrolase_4: TAP-li 95.7 0.047 1E-06 40.8 6.8 60 197-285 34-93 (103)
41 PRK06489 hypothetical protein; 95.7 0.037 8E-07 50.8 7.2 61 196-286 291-357 (360)
42 TIGR03695 menH_SHCHC 2-succiny 95.6 0.037 8E-07 46.3 6.6 59 196-284 193-251 (251)
43 PRK14875 acetoin dehydrogenase 95.4 0.041 8.9E-07 50.2 6.5 59 195-285 312-370 (371)
44 PRK10749 lysophospholipase L2; 95.0 0.053 1.1E-06 49.2 6.0 68 197-286 259-329 (330)
45 TIGR01607 PST-A Plasmodium sub 95.0 0.073 1.6E-06 48.4 6.8 62 197-285 270-332 (332)
46 PLN02652 hydrolase; alpha/beta 94.8 0.061 1.3E-06 50.3 5.8 62 197-285 324-386 (395)
47 PF00561 Abhydrolase_1: alpha/ 94.1 0.11 2.4E-06 43.4 5.5 57 195-280 173-229 (230)
48 PRK05855 short chain dehydroge 93.2 0.11 2.4E-06 50.4 4.5 59 197-285 233-291 (582)
49 PF00326 Peptidase_S9: Prolyl 93.2 0.25 5.4E-06 41.5 6.1 63 196-283 143-206 (213)
50 PLN02980 2-oxoglutarate decarb 93.1 0.19 4.1E-06 55.3 6.5 73 195-286 1566-1639(1655)
51 KOG4409 Predicted hydrolase/ac 93.0 0.27 5.9E-06 44.6 6.2 62 195-284 301-362 (365)
52 PRK11460 putative hydrolase; P 92.5 0.25 5.4E-06 42.5 5.2 63 196-283 147-209 (232)
53 PLN02511 hydrolase 91.8 0.22 4.7E-06 46.4 4.3 60 196-284 297-363 (388)
54 PRK10566 esterase; Provisional 91.4 0.33 7.3E-06 41.6 4.8 62 197-285 186-247 (249)
55 PLN02211 methyl indole-3-aceta 91.0 0.66 1.4E-05 40.8 6.4 59 197-285 211-269 (273)
56 PLN02872 triacylglycerol lipas 90.6 0.62 1.4E-05 43.5 6.1 60 197-284 325-387 (395)
57 TIGR01249 pro_imino_pep_1 prol 90.5 1.2 2.6E-05 39.7 7.8 43 197-268 248-290 (306)
58 PF12695 Abhydrolase_5: Alpha/ 90.0 0.75 1.6E-05 35.5 5.3 46 193-266 100-145 (145)
59 PF03583 LIP: Secretory lipase 89.5 0.75 1.6E-05 41.1 5.5 66 197-287 219-286 (290)
60 TIGR03100 hydr1_PEP hydrolase, 89.2 0.93 2E-05 39.9 5.8 72 191-284 201-273 (274)
61 KOG2382 Predicted alpha/beta h 88.7 0.89 1.9E-05 40.9 5.3 31 255-285 282-312 (315)
62 COG0596 MhpC Predicted hydrola 88.7 1.6 3.4E-05 36.0 6.7 61 195-283 219-279 (282)
63 PRK13604 luxD acyl transferase 88.2 2.1 4.5E-05 38.6 7.3 58 196-281 201-258 (307)
64 PF02230 Abhydrolase_2: Phosph 87.9 0.8 1.7E-05 38.7 4.4 59 197-284 155-213 (216)
65 TIGR01836 PHA_synth_III_C poly 86.7 1.6 3.5E-05 39.8 6.0 62 196-285 285-349 (350)
66 PRK10985 putative hydrolase; P 86.5 2.2 4.8E-05 38.4 6.7 47 196-271 254-300 (324)
67 COG1506 DAP2 Dipeptidyl aminop 85.7 1.6 3.4E-05 43.4 5.7 60 197-283 551-610 (620)
68 COG0400 Predicted esterase [Ge 84.6 1.6 3.5E-05 37.0 4.5 60 196-285 145-204 (207)
69 COG2267 PldB Lysophospholipase 84.4 2.1 4.6E-05 38.3 5.4 63 196-285 227-293 (298)
70 TIGR01838 PHA_synth_I poly(R)- 83.3 1.7 3.7E-05 42.2 4.6 48 197-273 415-462 (532)
71 PF07519 Tannase: Tannase and 82.8 2.4 5.1E-05 40.7 5.3 81 188-285 344-426 (474)
72 PF06821 Ser_hydrolase: Serine 77.2 4.2 9.1E-05 33.2 4.4 43 197-269 114-156 (171)
73 KOG1552 Predicted alpha/beta h 74.7 5.5 0.00012 34.7 4.6 59 197-284 192-250 (258)
74 PRK05077 frsA fermentation/res 73.1 10 0.00022 35.6 6.4 57 197-285 355-411 (414)
75 PRK07868 acyl-CoA synthetase; 61.8 12 0.00026 39.4 4.9 59 197-284 297-359 (994)
76 PF08840 BAAT_C: BAAT / Acyl-C 60.7 12 0.00027 31.6 4.0 49 196-267 114-163 (213)
77 PRK11071 esterase YqiA; Provis 59.1 24 0.00052 29.1 5.4 55 196-284 135-189 (190)
78 KOG2551 Phospholipase/carboxyh 58.4 34 0.00074 29.3 6.1 46 197-272 163-208 (230)
79 PF00681 Plectin: Plectin repe 55.2 4.8 0.0001 25.0 0.4 31 28-58 12-42 (45)
80 COG2945 Predicted hydrolase of 52.4 14 0.0003 31.0 2.7 60 193-283 145-204 (210)
81 PF01738 DLH: Dienelactone hyd 51.7 66 0.0014 26.7 7.0 65 193-282 141-210 (218)
82 PLN02442 S-formylglutathione h 50.6 32 0.0007 30.3 5.1 49 195-268 215-264 (283)
83 PF07849 DUF1641: Protein of u 50.3 5.9 0.00013 24.3 0.2 17 146-162 15-31 (42)
84 COG1073 Hydrolases of the alph 49.0 53 0.0012 28.0 6.2 61 198-285 233-296 (299)
85 COG3208 GrsT Predicted thioest 46.7 48 0.001 28.8 5.3 59 197-284 176-234 (244)
86 PF03959 FSH1: Serine hydrolas 44.2 23 0.00049 29.8 3.0 48 197-273 161-208 (212)
87 PF03096 Ndr: Ndr family; Int 43.9 9.4 0.0002 33.9 0.6 62 197-287 219-280 (283)
88 PF10503 Esterase_phd: Esteras 35.2 34 0.00075 29.2 2.7 26 197-222 169-194 (220)
89 PF10142 PhoPQ_related: PhoPQ- 34.6 1.4E+02 0.0029 27.8 6.6 64 197-288 262-326 (367)
90 COG3509 LpqC Poly(3-hydroxybut 31.2 1.6E+02 0.0034 26.6 6.1 20 254-273 263-282 (312)
91 TIGR01840 esterase_phb esteras 29.4 45 0.00098 27.7 2.5 27 198-224 169-195 (212)
92 smart00581 PSP proline-rich do 29.4 38 0.00083 22.1 1.5 18 153-170 10-27 (54)
93 TIGR01680 Veg_Stor_Prot vegeta 28.5 1.1E+02 0.0023 27.2 4.6 43 183-227 147-189 (275)
94 KOG4667 Predicted esterase [Li 28.3 88 0.0019 27.0 3.9 31 194-224 196-226 (269)
95 TIGR01675 plant-AP plant acid 28.1 1.1E+02 0.0023 26.5 4.5 43 183-227 122-164 (229)
96 PF05414 DUF1717: Viral domain 27.7 37 0.0008 24.2 1.3 12 196-207 39-50 (101)
97 PF04046 PSP: PSP; InterPro: 26.0 49 0.0011 21.0 1.5 18 153-170 6-23 (48)
98 TIGR00190 thiC thiamine biosyn 25.8 54 0.0012 30.6 2.4 31 257-288 258-288 (423)
99 KOG2931 Differentiation-relate 24.8 1.1E+02 0.0024 27.6 4.0 33 255-287 275-307 (326)
100 PRK05371 x-prolyl-dipeptidyl a 24.6 2E+02 0.0042 29.6 6.4 29 196-224 454-482 (767)
101 PF03767 Acid_phosphat_B: HAD 24.5 1E+02 0.0022 26.4 3.8 43 183-227 117-159 (229)
102 KOG3253 Predicted alpha/beta h 24.2 1.5E+02 0.0032 29.6 5.0 34 191-224 298-331 (784)
103 PRK10115 protease 2; Provision 23.7 1.4E+02 0.0031 30.1 5.2 28 197-224 605-633 (686)
104 KOG2564 Predicted acetyltransf 21.7 1.2E+02 0.0026 27.2 3.6 38 240-284 288-325 (343)
105 PF09851 SHOCT: Short C-termin 20.9 81 0.0018 17.8 1.7 18 42-59 10-27 (31)
106 smart00250 PLEC Plectin repeat 20.5 33 0.00071 20.3 -0.0 26 27-52 11-36 (38)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-60 Score=438.09 Aligned_cols=259 Identities=41% Similarity=0.704 Sum_probs=222.2
Q ss_pred ChHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhcccccCHHHHHHHhccCCC---CccccCCCCcchHH
Q 023030 1 MIVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQG---EYVNVDPSNGLCIA 77 (288)
Q Consensus 1 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~~gli~~~~~~~~~~~c~~---~~~~~~~~~~~C~~ 77 (288)
+||++|+++|+....+.|||||++||||++|+..|.+++.+|+|+||||++++++.+++.|.. ++......+..|..
T Consensus 184 ~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~ 263 (454)
T KOG1282|consen 184 ALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNK 263 (454)
T ss_pred HHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHH
Confidence 589999999986556789999999999999999999999999999999999999999999976 23333344678999
Q ss_pred HHHHHH-HHhhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccccchhhhhccCchhH
Q 023030 78 DLENIT-ECISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIWANDKTV 156 (288)
Q Consensus 78 ~~~~~~-~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~V 156 (288)
+++.+. .+.+.++.|+++.+.|.. .++. + . . + ..+...++|.. .. .++|||+++|
T Consensus 264 ~~~~~~~~~~~~i~~y~i~~~~C~~--~~~~-------~-------~--~--~-~~~~~~~~c~~--~~-~~~ylN~~~V 319 (454)
T KOG1282|consen 264 AVEEFDSKTTGDIDNYYILTPDCYP--TSYE-------L-------K--K--P-TDCYGYDPCLS--DY-AEKYLNRPEV 319 (454)
T ss_pred HHHHHHHHHhccCchhhhcchhhcc--cccc-------c-------c--c--c-ccccccCCchh--hh-HHHhcCCHHH
Confidence 999887 677889999999999963 0000 0 0 0 0 12344578854 22 3899999999
Q ss_pred HHHhCCCCCCcccceeecccc--ccCCCccchHHHHHHHHhcC-ceEEEEccCCccccccHHHHHHHHHcCCCCcccccc
Q 023030 157 QRAIGVQEGTVKYWVRCNQSL--SYTKDVSSSLAYHRNLIKKG-YQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQP 233 (288)
Q Consensus 157 ~~aL~v~~~~~~~w~~cs~~v--~~~~d~~~~~~~~~~Ll~~~-~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~ 233 (288)
|+||||+......|+.||+.| .|.++..+++|++..++.++ +|||||+||.|++||++||++||++|+++...+|+|
T Consensus 320 rkALh~~~~~~~~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~p 399 (454)
T KOG1282|consen 320 RKALHANKTSIGKWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRP 399 (454)
T ss_pred HHHhCCCCCCCCcccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccC
Confidence 999999886322799999998 47788899999999999865 999999999999999999999999999999999999
Q ss_pred cccC-CEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcCCCC
Q 023030 234 WFVE-GQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFACHPL 288 (288)
Q Consensus 234 w~~~-~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~~ 288 (288)
|+++ +|||||+++|+ + |+|+||+|||||||.|||++|++||++||.|++|
T Consensus 400 W~~~~~qvaG~~~~Y~---~--ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l 450 (454)
T KOG1282|consen 400 WYHKGGQVAGYTKTYG---G--LTFATVRGAGHMVPYDKPESALIMFQRFLNGQPL 450 (454)
T ss_pred CccCCCceeeeEEEec---C--EEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCC
Confidence 9996 89999999998 7 9999999999999999999999999999999986
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=6.3e-59 Score=419.42 Aligned_cols=253 Identities=43% Similarity=0.816 Sum_probs=213.9
Q ss_pred ChHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhcccccCHHHHHHHhccCCCCccccCCCCcchHHHHH
Q 023030 1 MIVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLE 80 (288)
Q Consensus 1 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~ 80 (288)
+||++|+++|++++.++||||||+||||||+|..|..++.+|+|.+|||++++++.+++.|........+....|.+++.
T Consensus 67 ~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~ 146 (319)
T PLN02213 67 ALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTE 146 (319)
T ss_pred HHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHH
Confidence 48999999997655678999999999999999999999999999999999999999999997543222234568999988
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccccchhhhhccCchhHHHHh
Q 023030 81 NITECISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIWANDKTVQRAI 160 (288)
Q Consensus 81 ~~~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~V~~aL 160 (288)
.+..+.+.+|+|+++.+.|.. ++ . ..+.|..++...+..|||+++||+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~----------------~~------~--------~~~~c~~~~~~~~~~ylN~~~V~~aL 196 (319)
T PLN02213 147 EYHKCTAKINIHHILTPDCDV----------------TN------V--------TSPDCYYYPYHLIECWANDESVREAL 196 (319)
T ss_pred HHHHHHhcCCHhhcccCcccC----------------cc------C--------CCCCcccchhHHHHHHhCCHHHHHHh
Confidence 888888899999998665631 00 0 01245432234688999999999999
Q ss_pred CCCCCCcccceeeccccccCCCccchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEe
Q 023030 161 GVQEGTVKYWVRCNQSLSYTKDVSSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQV 240 (288)
Q Consensus 161 ~v~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~ 240 (288)
||+......|+.|+..|.+..|..++++.+..+|..++|||||+||.|++||+.|+++|+++|+|++.++|++|++++++
T Consensus 197 ~v~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~ 276 (319)
T PLN02213 197 HIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQI 276 (319)
T ss_pred CcCCCCCCCCccCCcccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEe
Confidence 99853224799999998877777777777666676799999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcCCCC
Q 023030 241 AGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFACHPL 288 (288)
Q Consensus 241 ~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~~ 288 (288)
+||+|+|+ ++ |||++|+||||||| +||++|++||++||.+++|
T Consensus 277 ~G~vk~y~--~~--ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 277 AGYTRAYS--NK--MTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred eeEEEEec--Cc--ceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 99999997 56 99999999999998 6999999999999999876
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=4.8e-57 Score=419.80 Aligned_cols=253 Identities=43% Similarity=0.818 Sum_probs=215.1
Q ss_pred ChHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhcccccCHHHHHHHhccCCCCccccCCCCcchHHHHH
Q 023030 1 MIVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLE 80 (288)
Q Consensus 1 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~ 80 (288)
+||++|+++|+.+..++||||||+||||++||..|..++.+|+|.+|||++++++.+++.|...+....+.+..|..++.
T Consensus 181 ~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~~~~ 260 (433)
T PLN03016 181 ALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTE 260 (433)
T ss_pred HHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHHHHH
Confidence 47999999997655678999999999999999999999999999999999999999999997543222234568999998
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccccchhhhhccCchhHHHHh
Q 023030 81 NITECISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIWANDKTVQRAI 160 (288)
Q Consensus 81 ~~~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~V~~aL 160 (288)
.+..+.+.+|+||++.+.|... + . ..+.|..++...+++|||+++||+||
T Consensus 261 ~~~~~~~~~n~yni~~~~~~~~----------------~------~--------~~~~c~~~~~~~~~~ylN~~~V~~aL 310 (433)
T PLN03016 261 EYHKCTAKINIHHILTPDCDVT----------------N------V--------TSPDCYYYPYHLIECWANDESVREAL 310 (433)
T ss_pred HHHHHhcCCChhhccCCccccc----------------c------c--------CCCcccccchHHHHHHhCCHHHHHHh
Confidence 8888889999999987767310 0 0 01346433334678999999999999
Q ss_pred CCCCCCcccceeeccccccCCCccchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEe
Q 023030 161 GVQEGTVKYWVRCNQSLSYTKDVSSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQV 240 (288)
Q Consensus 161 ~v~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~ 240 (288)
||+......|..|+..|.+..|..++++.+..++.+++|||||+||.|++||+.|+++|+++|+|++.++|++|++++++
T Consensus 311 ~v~~~~~~~w~~cn~~v~~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~ 390 (433)
T PLN03016 311 HIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQI 390 (433)
T ss_pred CCCCCCCCCCccCCcccccccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEe
Confidence 99853224799999998777777777777777777799999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcCCCC
Q 023030 241 AGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFACHPL 288 (288)
Q Consensus 241 ~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~~ 288 (288)
+||+|+|+ ++ |||++|+||||||| +||++|++||++||.|++|
T Consensus 391 ~G~vk~y~--n~--ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 391 AGYTRAYS--NK--MTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred eeEEEEeC--Cc--eEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999996 46 99999999999998 7999999999999999986
No 4
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=6.4e-56 Score=412.33 Aligned_cols=255 Identities=41% Similarity=0.768 Sum_probs=212.7
Q ss_pred ChHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhcccccCHHHHHHHhccCCCCccccCCCCcchHHHHH
Q 023030 1 MIVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLE 80 (288)
Q Consensus 1 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~ 80 (288)
+||++|+++|+++..++||||||+|||||+||..|..++.+|+|++|||++++++.+++.|...+....+.+..|..++.
T Consensus 183 ~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~ 262 (437)
T PLN02209 183 ALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVE 262 (437)
T ss_pred HHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHH
Confidence 37999999987655678999999999999999999999999999999999999999999997533222234568999988
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccccchhhhhccCchhHHHHh
Q 023030 81 NITECISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIWANDKTVQRAI 160 (288)
Q Consensus 81 ~~~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~V~~aL 160 (288)
.+..+.+.++.|+.....|... ..+ ....+|..++...+..|||+++||+||
T Consensus 263 ~~~~~~~~~~~~~~~~~~c~~~-------------~~~---------------~~~~~c~~~~~~~~~~ylN~~~V~~aL 314 (437)
T PLN02209 263 EYHKCTDNINSHHTLIANCDDS-------------NTQ---------------HISPDCYYYPYHLVECWANNESVREAL 314 (437)
T ss_pred HHHHHhhcCCcccccccccccc-------------ccc---------------cCCCCcccccHHHHHHHhCCHHHHHHh
Confidence 8777888888887654557421 000 011345333334578999999999999
Q ss_pred CCCCCCcccceeeccccccCCCccchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEe
Q 023030 161 GVQEGTVKYWVRCNQSLSYTKDVSSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQV 240 (288)
Q Consensus 161 ~v~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~ 240 (288)
||+......|..|+..+.|..|..++++.+..+|.+|+|||||+||.|++||+.|+++|+++|+|++.++|++|++++++
T Consensus 315 ~v~~~~~~~w~~~~~~~~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~ 394 (437)
T PLN02209 315 HVDKGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQI 394 (437)
T ss_pred CCCCCCCCCCccccchhhcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEe
Confidence 99854345799999877777787777777667777899999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcCCCC
Q 023030 241 AGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFACHPL 288 (288)
Q Consensus 241 ~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~~ 288 (288)
+||+|+|+ ++ |||++|+||||||| +||++|++||++||.|++|
T Consensus 395 aG~vk~y~--n~--Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 395 AGYTRTYS--NK--MTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred eeEEEEeC--Cc--eEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 99999997 56 99999999999998 6999999999999999986
No 5
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=4.4e-52 Score=388.02 Aligned_cols=252 Identities=30% Similarity=0.536 Sum_probs=196.5
Q ss_pred ChHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhcccccCHHHHHHHhccCCCCccccCCCCcchHHHHH
Q 023030 1 MIVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKRNCQGEYVNVDPSNGLCIADLE 80 (288)
Q Consensus 1 ~lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~ 80 (288)
.||.+|+++|+++..+.||||||+|||||+||..|+.++.+|+|.+|+|+++.++.+.+.|.... ........|..+.+
T Consensus 152 ~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~ 230 (415)
T PF00450_consen 152 ALASYILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP-QCQKAITECAAALD 230 (415)
T ss_dssp HHHHHHHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH-SSSCCHHHHHHHHH
T ss_pred hhHHhhhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc-cccchhhHHHHHHH
Confidence 37999999998765679999999999999999999999999999999999999999999885321 11233568988888
Q ss_pred HHHH------HhhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccccchhhhhccCch
Q 023030 81 NITE------CISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIWANDK 154 (288)
Q Consensus 81 ~~~~------~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~ 154 (288)
.+.. +..++|+||++.++|.. . .... .......| .....+..|||++
T Consensus 231 ~~~~~~~~~~~~~~~n~Ydi~~~~~~~--~----------~~~~-------------~~~~~~~~--~~~~~~~~yln~~ 283 (415)
T PF00450_consen 231 ELSCQYAISQCNGGINPYDIRQPCYNP--S----------RSSY-------------DNSPSNDP--PDDDYLEAYLNRP 283 (415)
T ss_dssp HHHHHCHHHHHHTTSETTSTTSEETT---S----------HCTT-------------CCCCTTTT--TCHHHHHHHHTSH
T ss_pred hhhhhcccccccCCcceeeeecccccc--c----------cccc-------------cccccccc--cchhhHHHHhccH
Confidence 7765 34689999999884420 0 0000 00111233 2345788999999
Q ss_pred hHHHHhCCCCCCcccceeecccc--c-cCCCc-cchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCccc
Q 023030 155 TVQRAIGVQEGTVKYWVRCNQSL--S-YTKDV-SSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETG 230 (288)
Q Consensus 155 ~V~~aL~v~~~~~~~w~~cs~~v--~-~~~d~-~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~ 230 (288)
+||+||||+......|..|+..| . ...|. .++.+.++.||++++|||||+||.|++||+.|+++||++|+|++.++
T Consensus 284 ~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~ 363 (415)
T PF00450_consen 284 DVREALHVPVDSNVNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDG 363 (415)
T ss_dssp HHHHHTT-STTTSSS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEE
T ss_pred HHHHhhCCCcccCCcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccc
Confidence 99999999732246899999988 2 23454 78899999999999999999999999999999999999999999999
Q ss_pred cccccc--CCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcC
Q 023030 231 WQPWFV--EGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFAC 285 (288)
Q Consensus 231 ~~~w~~--~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~ 285 (288)
|++|.. +++++||+|+++ + |||++|+|||||||+|||++|++||++||+|
T Consensus 364 f~~~~~~~~~~~~G~~k~~~---~--ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 364 FRQWPRKVNGQVAGYVKQYG---N--LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEEEEEETTCSEEEEEEEET---T--EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred cccccccccccccceeEEec---c--EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 999987 899999999998 8 9999999999999999999999999999986
No 6
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=6.1e-51 Score=383.04 Aligned_cols=244 Identities=27% Similarity=0.473 Sum_probs=198.3
Q ss_pred hHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhc-------ccccCHHHHHHHhc---cCCCCccc----
Q 023030 2 IVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYL-------NALISHEIYESAKR---NCQGEYVN---- 67 (288)
Q Consensus 2 lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~-------~gli~~~~~~~~~~---~c~~~~~~---- 67 (288)
+|.+|+++|+.++.++||||||+|||||+||..|+.++.+|+|. +|+|++++++.+.+ .|......
T Consensus 188 ~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~ 267 (462)
T PTZ00472 188 TAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSN 267 (462)
T ss_pred HHHHHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhcccc
Confidence 78999999987666789999999999999999999999999995 58999999988865 24210000
Q ss_pred cCCCCcchHHHHHHHHHH-----hhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccc
Q 023030 68 VDPSNGLCIADLENITEC-----ISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFH 142 (288)
Q Consensus 68 ~~~~~~~C~~~~~~~~~~-----~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 142 (288)
.......|..+...|... .+++|+||++.+ |. .++|.+
T Consensus 268 ~~~~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~-----------------------------------~~~c~~- 310 (462)
T PTZ00472 268 PDDADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CI-----------------------------------GPLCYN- 310 (462)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhcCCChhheecc-CC-----------------------------------CCCccC-
Confidence 001234575555444332 256888998865 62 124632
Q ss_pred cchhhhhccCchhHHHHhCCCCCCcccceeecccc--ccCCCc-cchHHHHHHHHhcCceEEEEccCCccccccHHHHHH
Q 023030 143 NYVYSYIWANDKTVQRAIGVQEGTVKYWVRCNQSL--SYTKDV-SSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAW 219 (288)
Q Consensus 143 ~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cs~~v--~~~~d~-~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~ 219 (288)
...+++|||+++||+||||+. ..|+.|+..| .|..|. .++.+.++.||++|+|||||+||.|++||+.|+++|
T Consensus 311 -~~~~~~yLN~~~Vq~AL~v~~---~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~w 386 (462)
T PTZ00472 311 -MDNTIAFMNREDVQSSLGVKP---ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAW 386 (462)
T ss_pred -HHHHHHHhCCHHHHHHhCCCC---CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHH
Confidence 356889999999999999984 4799999988 466676 567788999999999999999999999999999999
Q ss_pred HHHcCCCCcccc-----ccc-ccCCEeeeEEEEEee--cCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcCCCC
Q 023030 220 IKSLNLTIETGW-----QPW-FVEGQVAGYWYRYKE--KNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFACHPL 288 (288)
Q Consensus 220 i~~l~w~~~~~~-----~~w-~~~~~~~G~~~~~~~--~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~~ 288 (288)
+++|+|++.++| ++| .++++++||+|+++. +++ |+|++|++||||||+|||+++++|+++|+.|+++
T Consensus 387 i~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~--l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 387 TLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSG--FSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred HHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCC--eEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 999999998776 699 578999999999951 125 9999999999999999999999999999999875
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.5e-31 Score=229.35 Aligned_cols=258 Identities=19% Similarity=0.243 Sum_probs=185.9
Q ss_pred hHHHHHhcccCCCCCCccceEEEEeCCCCCcccccCcccchhhcccccCHHHHHHHhc---cCCC-----CccccCCCCc
Q 023030 2 IVQHISDGIDVGHRPRMNLKGYLLGNPLTDSTENQNSVPHFAYLNALISHEIYESAKR---NCQG-----EYVNVDPSNG 73 (288)
Q Consensus 2 lA~~I~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~s~~~~~~~~gli~~~~~~~~~~---~c~~-----~~~~~~~~~~ 73 (288)
+|..+.+.++++ +++.||.|+++|+.||+|..-..|+.+|+|..+++|+...++..+ .|.. .+.. ...
T Consensus 139 ~al~l~~aIk~G-~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~---AT~ 214 (414)
T KOG1283|consen 139 FALELDDAIKRG-EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGG---ATG 214 (414)
T ss_pred hhhhHHHHHhcC-ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCcccc---ccc
Confidence 456666666664 478999999999999999999999999999999999998876654 4432 1211 112
Q ss_pred chHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccccccchhhhhccCc
Q 023030 74 LCIADLENITECISRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCRFHNYVYSYIWAND 153 (288)
Q Consensus 74 ~C~~~~~~~~~~~~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~ 153 (288)
.+......+.+...+++.||+.++.-.. +..........+... .+| +-.+ .. .+.....+.++||-
T Consensus 215 ~Wg~~e~li~~~sn~VdfYNil~~t~~d----~~~~ss~~~~~~~~~-~rr-l~~~----~~----~~~~~D~L~~lM~g 280 (414)
T KOG1283|consen 215 GWGGGENLISRESNGVDFYNILTKTLGD----QYSLSSRAAMTPEEV-MRR-LLVR----FV----GDEDRDKLSDLMNG 280 (414)
T ss_pred cccCcCcceeecccCcceeeeeccCCCc----chhhhhhhhcchHHH-HHH-HHhc----cC----cchhHHHHHHHhcc
Confidence 2233333455667889999998652211 100000000000000 000 0000 00 00112358899997
Q ss_pred hhHHHHhCCCCCCcccceeecccc--ccCCCc-cchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCccc
Q 023030 154 KTVQRAIGVQEGTVKYWVRCNQSL--SYTKDV-SSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETG 230 (288)
Q Consensus 154 ~~V~~aL~v~~~~~~~w~~cs~~v--~~~~d~-~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~ 230 (288)
| ||++|+|.+.. ..|...+..+ ....|. .+.+..+.+||++|++|.||||++|.||++.|+++|++.|.|++...
T Consensus 281 ~-vrkkLgIip~~-~~wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~ 358 (414)
T KOG1283|consen 281 P-VRKKLGIIPGG-VKWGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPS 358 (414)
T ss_pred c-ccccccccCCC-CcccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCc
Confidence 6 99999987653 5899998876 445565 68888899999999999999999999999999999999999999998
Q ss_pred cc--ccc---cCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhc
Q 023030 231 WQ--PWF---VEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFA 284 (288)
Q Consensus 231 ~~--~w~---~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~ 284 (288)
|+ +|+ ++-..+||.|+|. | |.|..|..||||||.|+|++|.+|++.+.+
T Consensus 359 f~~~~r~~~~~s~~l~gy~ktyk---n--l~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 359 FQVSPRVGITVSRVLEGYEKTYK---N--LSFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred cccceeeeccceeecchhhhhhc---c--ceeEEeecccCcccCCCHHHHhhheeeccc
Confidence 85 553 3457899999998 8 999999999999999999999999987754
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=99.93 E-value=5.4e-26 Score=208.68 Aligned_cols=242 Identities=23% Similarity=0.303 Sum_probs=182.0
Q ss_pred hHHHHHhcccCCCCCCccceEEEEeCC-CCCcccccCcccchhhc----ccccCHHHHHHHhccCCCCccc-----c--C
Q 023030 2 IVQHISDGIDVGHRPRMNLKGYLLGNP-LTDSTENQNSVPHFAYL----NALISHEIYESAKRNCQGEYVN-----V--D 69 (288)
Q Consensus 2 lA~~I~~~n~~~~~~~inLkGi~IGNg-~~dp~~q~~s~~~~~~~----~gli~~~~~~~~~~~c~~~~~~-----~--~ 69 (288)
||++|+++|.. .+-.+||++++|||| +|||..|+.+|..|+.. ++..+.+..+++++.|.+++.. . .
T Consensus 215 ~A~~L~~~~~~-~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~ 293 (498)
T COG2939 215 FAHELLEDNIA-LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDS 293 (498)
T ss_pred HHHHHHHhccc-cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCc
Confidence 79999998743 244799999999999 99999999999999974 4566777888888888654311 0 1
Q ss_pred CCCcchHHHHHHHHHHh---------hcCCCCCCCCCCCCCCCCCCcccccccCccccccccccccCCCCCCCccccccc
Q 023030 70 PSNGLCIADLENITECI---------SRVNHAQIYEPSCRGPFISPRRKLFNWNSSVLEEDSLDFLSSPTQPAASGTWCR 140 (288)
Q Consensus 70 ~~~~~C~~~~~~~~~~~---------~~in~y~i~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 140 (288)
.....|..+...|.... +..|+|+++.. |.. | .-.--|+
T Consensus 294 ~~~~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d----~---------------------------g~~~~~y 341 (498)
T COG2939 294 GSLQPCENASAYLTGLMREYVGRAGGRLLNVYDIREE-CRD----P---------------------------GLGGSCY 341 (498)
T ss_pred hhhhHHHHHHHHHHhcchhhhccccccccccccchhh-cCC----C---------------------------Ccccccc
Confidence 12246777766665432 13677877755 521 0 0011233
Q ss_pred cccchhhhhccCchhHHHHhCCCCCCcccceeecccc--cc---CCCc-cchHHHHHHHHhcCceEEEEccCCccccccH
Q 023030 141 FHNYVYSYIWANDKTVQRAIGVQEGTVKYWVRCNQSL--SY---TKDV-SSSLAYHRNLIKKGYQVLIYSGDVDMKVPYV 214 (288)
Q Consensus 141 ~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cs~~v--~~---~~d~-~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~ 214 (288)
+. .....+|++-..++++++... ..|..|+..+ +| ..+. ..+...+..++.+++.+++|.||.|.+|++.
T Consensus 342 ~~-~~~~ld~~~~~~~~~~~~~~~---d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~ 417 (498)
T COG2939 342 DT-LSTSLDYFNFDPEQEVNDPEV---DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLR 417 (498)
T ss_pred cc-eeeccccccccchhccccccc---cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhh
Confidence 22 234568888788998888654 4799999986 45 3454 3455556778888999999999999999999
Q ss_pred HHHHHHHHcCCCCccccc-----cccc--CCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhcC
Q 023030 215 ATEAWIKSLNLTIETGWQ-----PWFV--EGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFAC 285 (288)
Q Consensus 215 g~~~~i~~l~w~~~~~~~-----~w~~--~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~ 285 (288)
|+++|..+|.|.+...|. +|.. ..+..|-++++. | |+|+.++.||||||+|+|+.+++|++.|+.+
T Consensus 418 ~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~---n--~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 418 GNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYR---N--LTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred hhcccCCcceEeeecchhhhcCCCcccccchhhcccccccC---C--ceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 999999999999999883 4543 456777777787 7 9999999999999999999999999999976
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.53 E-value=0.00034 Score=61.39 Aligned_cols=61 Identities=13% Similarity=0.091 Sum_probs=52.9
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
+-.++||+..|..|.+++..-.+.+.+.+. + ..++.|.+|||+++.++|+.
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~---------------------------~--~~~~~i~~agH~~~~e~p~~ 271 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP---------------------------D--AQLHVFSRCGHWAQWEHADA 271 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC---------------------------C--CEEEEeCCCCcCCcccCHHH
Confidence 346899999999999999877776666652 5 78899999999999999999
Q ss_pred HHHHHHHHhc
Q 023030 275 CLGMIDRWFA 284 (288)
Q Consensus 275 ~~~m~~~fi~ 284 (288)
..++|..|+.
T Consensus 272 ~~~~i~~fl~ 281 (282)
T TIGR03343 272 FNRLVIDFLR 281 (282)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 10
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.26 E-value=0.00086 Score=56.51 Aligned_cols=60 Identities=13% Similarity=0.014 Sum_probs=50.8
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
+-.++|||.+|..|.+++....+.+.+.+. + -++..+.++||+++.++|+.
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP---------------------------H--SELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC---------------------------C--CeEEEeCCCCCCccccCHHH
Confidence 346899999999999999887766655542 4 66788999999999999999
Q ss_pred HHHHHHHHh
Q 023030 275 CLGMIDRWF 283 (288)
Q Consensus 275 ~~~m~~~fi 283 (288)
..+.+..||
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999986
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.26 E-value=0.00056 Score=60.77 Aligned_cols=59 Identities=15% Similarity=0.117 Sum_probs=49.1
Q ss_pred CceEEEEccCCccccccHHH-HHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVAT-EAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~-~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
.++|||..|+.|.+++.... +.+.+.+ . + .++.+|.+|||+++.++|+..
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i------------------------p---~--~~~~~i~~aGH~~~~e~Pe~~ 277 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF------------------------P---D--HVLVELPNAKHFIQEDAPDRI 277 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc------------------------C---C--CeEEEcCCCcccccccCHHHH
Confidence 69999999999998866554 3344444 2 5 888999999999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
.+++.+|+.
T Consensus 278 ~~~i~~~~~ 286 (286)
T PRK03204 278 AAAIIERFG 286 (286)
T ss_pred HHHHHHhcC
Confidence 999999973
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.18 E-value=0.0012 Score=57.25 Aligned_cols=61 Identities=16% Similarity=0.026 Sum_probs=51.1
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
+-.++|||..|..|.++|....+...+.+ . + ..++.|.++||+++.++|+.
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i------------------------~---~--~~~~~i~~~gH~~~~e~p~~ 244 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLW------------------------P---H--SESYIFAKAAHAPFISHPAE 244 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhC------------------------C---C--CeEEEeCCCCCCccccCHHH
Confidence 34799999999999999887665444444 2 5 78899999999999999999
Q ss_pred HHHHHHHHhc
Q 023030 275 CLGMIDRWFA 284 (288)
Q Consensus 275 ~~~m~~~fi~ 284 (288)
..+.+.+|-.
T Consensus 245 f~~~l~~~~~ 254 (256)
T PRK10349 245 FCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHhc
Confidence 9999999853
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.18 E-value=0.001 Score=57.35 Aligned_cols=60 Identities=20% Similarity=0.239 Sum_probs=51.6
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.++||+..|+.|..++....+.+.+.+ . + .+++++.++||+.+.++|+...
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------------------------~---~--~~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQF------------------------P---Q--ARAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhC------------------------C---C--cEEEEeCCCCCeeeccCHHHHH
Confidence 579999999999988876666665554 2 5 8889999999999999999999
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
+.+.+|+..
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999975
No 14
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.18 E-value=0.0014 Score=55.30 Aligned_cols=60 Identities=20% Similarity=0.286 Sum_probs=51.7
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.++||+..|+.|.++|....+.+.+.+. + .+++.+.++||+++.++|+..
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~~~~p~~~ 242 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP---------------------------G--ARFAEIRGAGHIPCVEQPEAF 242 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC---------------------------C--ceEEEECCCCCcccccChHHH
Confidence 46899999999999999887776666552 4 777899999999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
.+.+..|+.
T Consensus 243 ~~~i~~fl~ 251 (251)
T TIGR02427 243 NAALRDFLR 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999974
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.13 E-value=0.0013 Score=56.11 Aligned_cols=60 Identities=20% Similarity=0.256 Sum_probs=52.0
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.++|||.+|+.|.++|....+.+.+.+. + ..++.+.++||+.+.++|+..
T Consensus 197 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~~~~~~~~ 247 (257)
T TIGR03611 197 IQHPVLLIANRDDMLVPYTQSLRLAAALP---------------------------N--AQLKLLPYGGHASNVTDPETF 247 (257)
T ss_pred cCccEEEEecCcCcccCHHHHHHHHHhcC---------------------------C--ceEEEECCCCCCccccCHHHH
Confidence 36899999999999999888777766652 4 667889999999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
.+.+.+||.
T Consensus 248 ~~~i~~fl~ 256 (257)
T TIGR03611 248 NRALLDFLK 256 (257)
T ss_pred HHHHHHHhc
Confidence 999999985
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.11 E-value=0.0012 Score=57.31 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=51.3
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.++|||..|+.|.++|....+.+.+.+. + ..++.+.++||+++.++|+...
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~~e~p~~~~ 270 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVP---------------------------T--ATLHVVPGGGHLVHEEQADGVV 270 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhcc---------------------------C--CeEEEECCCCCcccccCHHHHH
Confidence 5899999999999999887777766652 4 6678899999999999999999
Q ss_pred HHHHHHhc
Q 023030 277 GMIDRWFA 284 (288)
Q Consensus 277 ~m~~~fi~ 284 (288)
+.|.+|+.
T Consensus 271 ~~i~~f~~ 278 (278)
T TIGR03056 271 GLILQAAE 278 (278)
T ss_pred HHHHHHhC
Confidence 99999984
No 17
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.09 E-value=0.0014 Score=58.52 Aligned_cols=70 Identities=20% Similarity=0.117 Sum_probs=53.3
Q ss_pred HHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCC
Q 023030 191 RNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEY 270 (288)
Q Consensus 191 ~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~d 270 (288)
..|.+-.++|||..|..|.+++... +.+.+.+. ... + ..++.+.++||+++.+
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~---------------------~~~---~--~~~~~i~~~gH~~~~e 285 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIP---------------------GAA---G--QPHPTIKGAGHFLQED 285 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcc---------------------ccc---c--cceeeecCCCccchhh
Confidence 3344557999999999999999754 44433331 001 2 5578999999999999
Q ss_pred CcHHHHHHHHHHhcCCC
Q 023030 271 KPKECLGMIDRWFACHP 287 (288)
Q Consensus 271 qP~~~~~m~~~fi~~~~ 287 (288)
+|+.....+..|+...|
T Consensus 286 ~p~~~~~~l~~fl~~~~ 302 (302)
T PRK00870 286 SGEELAEAVLEFIRATP 302 (302)
T ss_pred ChHHHHHHHHHHHhcCC
Confidence 99999999999998764
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.02 E-value=0.0015 Score=60.09 Aligned_cols=66 Identities=23% Similarity=0.366 Sum_probs=52.0
Q ss_pred cCceEEEEccCCccccccHHH-HHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVAT-EAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~-~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
-.++|||..|+.|.++|..+. ..+++.|. +... + .++++|.+|||+++.++|++
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~ip---~--~~l~~i~~aGH~~~~E~Pe~ 345 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQLP---N--VTLYVLEGVGHCPHDDRPDL 345 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccCC---c--eEEEEcCCCCCCccccCHHH
Confidence 368999999999999988753 23444441 0012 5 78899999999999999999
Q ss_pred HHHHHHHHhcCC
Q 023030 275 CLGMIDRWFACH 286 (288)
Q Consensus 275 ~~~m~~~fi~~~ 286 (288)
..+.|.+|+...
T Consensus 346 ~~~~I~~FL~~~ 357 (360)
T PLN02679 346 VHEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHHhc
Confidence 999999999754
No 19
>PRK07581 hypothetical protein; Validated
Probab=96.99 E-value=0.0024 Score=58.02 Aligned_cols=60 Identities=17% Similarity=0.125 Sum_probs=52.8
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcC-CCccCCCCCcHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKG-AGHTAPEYKPKE 274 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~-AGH~vP~dqP~~ 274 (288)
-.++|||..|+.|.++|....+.+.+.+. + .++++|.+ |||+++.++|..
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~ip---------------------------~--a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALIP---------------------------N--AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC---------------------------C--CeEEEeCCCCCccccccCcHH
Confidence 36899999999999999988887776662 4 67789999 999999999999
Q ss_pred HHHHHHHHhc
Q 023030 275 CLGMIDRWFA 284 (288)
Q Consensus 275 ~~~m~~~fi~ 284 (288)
...++++|+.
T Consensus 325 ~~~~~~~~~~ 334 (339)
T PRK07581 325 DIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHH
Confidence 9999999984
No 20
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.95 E-value=0.002 Score=59.89 Aligned_cols=58 Identities=22% Similarity=0.202 Sum_probs=50.2
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.++|||..|+.|.+++....+.+.+.. + .++++|.+|||+++.++|++..
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~~----------------------------~--a~l~vIp~aGH~~~~E~Pe~v~ 374 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKSS----------------------------Q--HKLIELPMAGHHVQEDCGEELG 374 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHhc----------------------------C--CeEEEECCCCCCcchhCHHHHH
Confidence 589999999999999887776666542 3 5678899999999999999999
Q ss_pred HHHHHHhc
Q 023030 277 GMIDRWFA 284 (288)
Q Consensus 277 ~m~~~fi~ 284 (288)
..|.+|+.
T Consensus 375 ~~I~~Fl~ 382 (383)
T PLN03084 375 GIISGILS 382 (383)
T ss_pred HHHHHHhh
Confidence 99999985
No 21
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=96.87 E-value=0.0034 Score=54.33 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=49.8
Q ss_pred HHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCC
Q 023030 192 NLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYK 271 (288)
Q Consensus 192 ~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dq 271 (288)
.|.+-+++||+..|+.|.+ +....+.+.+.+. + ..++.+.++||+++.++
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA---------------------------G--SRLVVFPDGSHMTMIED 275 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc---------------------------C--CeEEEeCCCCCCcccCC
Confidence 3334579999999999985 4455566655542 4 66788999999999999
Q ss_pred cHHHHHHHHHHhc
Q 023030 272 PKECLGMIDRWFA 284 (288)
Q Consensus 272 P~~~~~m~~~fi~ 284 (288)
|++..+.|.+|+.
T Consensus 276 p~~~~~~i~~fl~ 288 (288)
T TIGR01250 276 PEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999984
No 22
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.85 E-value=0.0026 Score=56.43 Aligned_cols=61 Identities=23% Similarity=0.281 Sum_probs=51.0
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.++|||..|..|.++|....++ +.++. . + .+++.|.+|||+++.++|++.
T Consensus 233 i~~P~lvi~G~~D~~~~~~~~~~-~~~~~-----------------------~---~--~~~~~i~~~gH~~~~e~p~~~ 283 (294)
T PLN02824 233 VKCPVLIAWGEKDPWEPVELGRA-YANFD-----------------------A---V--EDFIVLPGVGHCPQDEAPELV 283 (294)
T ss_pred cCCCeEEEEecCCCCCChHHHHH-HHhcC-----------------------C---c--cceEEeCCCCCChhhhCHHHH
Confidence 36899999999999999877665 44431 1 4 677899999999999999999
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
.+.+.+|+.+
T Consensus 284 ~~~i~~fl~~ 293 (294)
T PLN02824 284 NPLIESFVAR 293 (294)
T ss_pred HHHHHHHHhc
Confidence 9999999964
No 23
>PRK03592 haloalkane dehalogenase; Provisional
Probab=96.83 E-value=0.0015 Score=58.00 Aligned_cols=62 Identities=19% Similarity=0.263 Sum_probs=52.3
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.++|||.+|+.|.+++.....+++..+. . + .++..+.+|||+++.++|++..
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~---~--~~~~~i~~~gH~~~~e~p~~v~ 279 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP-----------------------N---Q--LEITVFGAGLHFAQEDSPEEIG 279 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh-----------------------h---h--cceeeccCcchhhhhcCHHHHH
Confidence 6899999999999997677777776542 2 4 6678889999999999999999
Q ss_pred HHHHHHhcCC
Q 023030 277 GMIDRWFACH 286 (288)
Q Consensus 277 ~m~~~fi~~~ 286 (288)
+.+..|+...
T Consensus 280 ~~i~~fl~~~ 289 (295)
T PRK03592 280 AAIAAWLRRL 289 (295)
T ss_pred HHHHHHHHHh
Confidence 9999999753
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.75 E-value=0.0021 Score=58.70 Aligned_cols=61 Identities=11% Similarity=0.109 Sum_probs=52.4
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcC-CCccCCCCCcHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKG-AGHTAPEYKPKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~-AGH~vP~dqP~~~ 275 (288)
.+++||..|+.|.++|....+...+.+. . + -.+++|.+ |||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p---~--a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------P---R--GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------C---C--CeEEEEeCCccHHHHhcCHHHH
Confidence 5799999999999999888777777762 1 4 66788875 9999999999999
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
..++..||..
T Consensus 329 ~~~l~~FL~~ 338 (343)
T PRK08775 329 DAILTTALRS 338 (343)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=96.72 E-value=0.0039 Score=54.65 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=51.3
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcH--
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPK-- 273 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~-- 273 (288)
-.++|||..|+.|.+||....+.+.+.+. . + -++.++.+|||++..++|+
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~-----------------------~---~--~~~~~~~~~gH~~~~e~~~~~ 259 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHAN-----------------------C---N--REIKIYEGAKHHLHKETDEVK 259 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHcc-----------------------C---C--ceEEEeCCCcccccCCchhHH
Confidence 46899999999999999999998888763 1 3 6778999999999999985
Q ss_pred -HHHHHHHHHhcCC
Q 023030 274 -ECLGMIDRWFACH 286 (288)
Q Consensus 274 -~~~~m~~~fi~~~ 286 (288)
.+.+-+.+||.+.
T Consensus 260 ~~~~~~~~~~l~~~ 273 (276)
T PHA02857 260 KSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHHHHh
Confidence 4556666787653
No 26
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.69 E-value=0.0041 Score=56.56 Aligned_cols=60 Identities=32% Similarity=0.433 Sum_probs=53.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
+++|||..|+.|.++|....+...+++. | ..+..|.+|||.+..++|++.-
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p---------------------------n--~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP---------------------------N--AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC---------------------------C--ceEEEeCCCCcccccCCHHHHH
Confidence 4889999999999999997776666652 6 9999999999999999999999
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
..+..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999965
No 27
>PLN02965 Probable pheophorbidase
Probab=96.66 E-value=0.0044 Score=53.84 Aligned_cols=60 Identities=8% Similarity=0.004 Sum_probs=51.6
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.+++|+..|..|.++|....+...+.+. + -+++.+.+|||++..++|++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~---------------------------~--a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP---------------------------P--AQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC---------------------------c--ceEEEecCCCCchhhcCHHHH
Confidence 46899999999999999877666666652 4 667889999999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
.+++.+|+.
T Consensus 243 ~~~l~~~~~ 251 (255)
T PLN02965 243 FQYLLQAVS 251 (255)
T ss_pred HHHHHHHHH
Confidence 999999975
No 28
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.62 E-value=0.0034 Score=56.10 Aligned_cols=63 Identities=25% Similarity=0.317 Sum_probs=49.4
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCcee-EEEEEcCCCccCCCCCcH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHL-TFATVKGAGHTAPEYKPK 273 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~l-tf~~V~~AGH~vP~dqP~ 273 (288)
+-.++|+++.|+.|.++++.......+.+ .. + | .-+++.|+||.|++++|+
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~-----------------------vp---~--l~~~vv~~~~gH~vqqe~p~ 307 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKD-----------------------VP---R--LTERVVIEGIGHFVQQEKPQ 307 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHh-----------------------hc---c--ccceEEecCCcccccccCHH
Confidence 34689999999999999998444433332 11 2 3 448899999999999999
Q ss_pred HHHHHHHHHhcC
Q 023030 274 ECLGMIDRWFAC 285 (288)
Q Consensus 274 ~~~~m~~~fi~~ 285 (288)
+..+++..|++.
T Consensus 308 ~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 308 EVNQAILGFINS 319 (322)
T ss_pred HHHHHHHHHHHh
Confidence 999999999863
No 29
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=96.57 E-value=0.0048 Score=54.21 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=49.7
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.++|||..|+.|-++|....+...+.+. + .+++.|. +|||++.++|++.
T Consensus 206 i~~P~lii~G~~D~~v~~~~~~~l~~~~~---------------------------~--~~~~~i~-~gH~~~~e~p~~~ 255 (276)
T TIGR02240 206 IQQPTLVLAGDDDPIIPLINMRLLAWRIP---------------------------N--AELHIID-DGHLFLITRAEAV 255 (276)
T ss_pred CCCCEEEEEeCCCCcCCHHHHHHHHHhCC---------------------------C--CEEEEEc-CCCchhhccHHHH
Confidence 36899999999999999887766665542 4 6667775 5999999999999
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
.+.+.+|+.+
T Consensus 256 ~~~i~~fl~~ 265 (276)
T TIGR02240 256 APIIMKFLAE 265 (276)
T ss_pred HHHHHHHHHH
Confidence 9999999865
No 30
>PLN02578 hydrolase
Probab=96.38 E-value=0.011 Score=54.14 Aligned_cols=60 Identities=20% Similarity=0.280 Sum_probs=49.4
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.++||+..|+.|.+++....+++.+.+. + ..++.+ ++||+.+.++|++.
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~p---------------------------~--a~l~~i-~~GH~~~~e~p~~~ 344 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFYP---------------------------D--TTLVNL-QAGHCPHDEVPEQV 344 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC---------------------------C--CEEEEe-CCCCCccccCHHHH
Confidence 36899999999999998887766655542 4 556667 79999999999999
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
.+.|..|+.+
T Consensus 345 ~~~I~~fl~~ 354 (354)
T PLN02578 345 NKALLEWLSS 354 (354)
T ss_pred HHHHHHHHhC
Confidence 9999999863
No 31
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.31 E-value=0.013 Score=55.95 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=54.5
Q ss_pred HHHHh-cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCC
Q 023030 191 RNLIK-KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPE 269 (288)
Q Consensus 191 ~~Ll~-~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~ 269 (288)
..+++ -.++|||..|+.|.++|....+...+.+. + -.++.|.+|||+.+.
T Consensus 411 ~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP---------------------------~--a~l~vI~~aGH~~~v 461 (481)
T PLN03087 411 DHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP---------------------------R--ARVKVIDDKDHITIV 461 (481)
T ss_pred HHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC---------------------------C--CEEEEeCCCCCcchh
Confidence 34443 36899999999999999998887766663 4 667899999999996
Q ss_pred -CCcHHHHHHHHHHhcC
Q 023030 270 -YKPKECLGMIDRWFAC 285 (288)
Q Consensus 270 -dqP~~~~~m~~~fi~~ 285 (288)
++|+...+.+..|...
T Consensus 462 ~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 462 VGRQKEFARELEEIWRR 478 (481)
T ss_pred hcCHHHHHHHHHHHhhc
Confidence 9999999999999854
No 32
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.14 E-value=0.011 Score=54.82 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=52.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEc-CCCccCCCCCcHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVK-GAGHTAPEYKPKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~-~AGH~vP~dqP~~~ 275 (288)
.+++||..|+.|.++|....++....+.= .+ .. .+++.|. ++||+.+.++|++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~---------------------a~--~~--~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLA---------------------AG--AD--VSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHh---------------------cC--CC--eEEEEeCCCCCchhHhcCHHHH
Confidence 68999999999999999887766666520 01 12 5788886 99999999999999
Q ss_pred HHHHHHHhcCC
Q 023030 276 LGMIDRWFACH 286 (288)
Q Consensus 276 ~~m~~~fi~~~ 286 (288)
-+.|.+|+...
T Consensus 364 ~~~L~~FL~~~ 374 (379)
T PRK00175 364 GRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHhh
Confidence 99999999753
No 33
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=96.12 E-value=0.011 Score=54.02 Aligned_cols=62 Identities=19% Similarity=0.255 Sum_probs=51.7
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH--
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE-- 274 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~-- 274 (288)
.+++||.+|..|.+++....+.+.+.+.- . + -++..+.++||+...++|++
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~~----------------------~---~--~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKASS----------------------S---D--KKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcCC----------------------C---C--ceEEEeCCCeeecccCCChhhH
Confidence 68999999999999999888887777631 1 4 67788999999999999987
Q ss_pred --HHHHHHHHhcC
Q 023030 275 --CLGMIDRWFAC 285 (288)
Q Consensus 275 --~~~m~~~fi~~ 285 (288)
+++.+.+||..
T Consensus 332 ~~v~~~i~~wL~~ 344 (349)
T PLN02385 332 FQVLDDIISWLDS 344 (349)
T ss_pred HHHHHHHHHHHHH
Confidence 77778888864
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.99 E-value=0.011 Score=54.13 Aligned_cols=63 Identities=17% Similarity=0.181 Sum_probs=50.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEc-CCCccCCCCCcHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVK-GAGHTAPEYKPKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~-~AGH~vP~dqP~~~ 275 (288)
.+++||..|..|.++|....+...+.+.= .. -. .+|+.|. +|||+++.++|+..
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~---------------------~~--~~--v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPA---------------------AG--LR--VTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhh---------------------cC--Cc--eEEEEeCCCCCcchhhcCHHHH
Confidence 68999999999999999988877776630 00 01 4556665 89999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
.+.|.+|++
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999984
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=95.95 E-value=0.016 Score=54.22 Aligned_cols=59 Identities=12% Similarity=-0.053 Sum_probs=45.2
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.++||+..|+.|.+++ ...+++...++ . . ..++.|.+|||+++.|+|+...
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~~-----------------------~---~--~~~~~i~~aGH~~~~E~P~~f~ 375 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRMK-----------------------V---P--CEIIRVPQGGHFVFLDNPSGFH 375 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHcC-----------------------C---C--CcEEEeCCCCCeeeccCHHHHH
Confidence 6899999999998876 33444444432 1 3 5678999999999999999988
Q ss_pred HHHHHHhc
Q 023030 277 GMIDRWFA 284 (288)
Q Consensus 277 ~m~~~fi~ 284 (288)
+++.+|+.
T Consensus 376 ~~l~~~~~ 383 (402)
T PLN02894 376 SAVLYACR 383 (402)
T ss_pred HHHHHHHH
Confidence 88777664
No 36
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.94 E-value=0.015 Score=48.05 Aligned_cols=53 Identities=28% Similarity=0.331 Sum_probs=43.2
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-+++|+++.|+.|.+++..-.+.+.+.+. + .+++++.++||+++.++|++.
T Consensus 175 ~~~pvl~i~g~~D~~~~~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~~~~p~~~ 225 (228)
T PF12697_consen 175 IKVPVLVIHGEDDPIVPPESAEELADKLP---------------------------N--AELVVIPGAGHFLFLEQPDEV 225 (228)
T ss_dssp SSSEEEEEEETTSSSSHHHHHHHHHHHST---------------------------T--EEEEEETTSSSTHHHHSHHHH
T ss_pred cCCCeEEeecCCCCCCCHHHHHHHHHHCC---------------------------C--CEEEEECCCCCccHHHCHHHH
Confidence 47999999999999999555555555552 5 888999999999999999976
Q ss_pred HH
Q 023030 276 LG 277 (288)
Q Consensus 276 ~~ 277 (288)
.+
T Consensus 226 ~~ 227 (228)
T PF12697_consen 226 AE 227 (228)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 37
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.91 E-value=0.028 Score=52.35 Aligned_cols=67 Identities=13% Similarity=0.084 Sum_probs=54.2
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcC-CCccCCCCCcH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKG-AGHTAPEYKPK 273 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~-AGH~vP~dqP~ 273 (288)
.-..+|||..|+.|.++|..-.++..+.+.= .+ .+ .+++.|.+ +||+++.++|+
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~---------------------~~--~~--a~l~~I~s~~GH~~~le~p~ 375 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQK---------------------QG--KY--AEVYEIESINGHMAGVFDIH 375 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh---------------------cC--CC--eEEEEECCCCCcchhhcCHH
Confidence 3468999999999999998877766666520 00 14 78899986 99999999999
Q ss_pred HHHHHHHHHhcCC
Q 023030 274 ECLGMIDRWFACH 286 (288)
Q Consensus 274 ~~~~m~~~fi~~~ 286 (288)
.....+.+|+..+
T Consensus 376 ~~~~~I~~FL~~~ 388 (389)
T PRK06765 376 LFEKKIYEFLNRK 388 (389)
T ss_pred HHHHHHHHHHccc
Confidence 9999999999754
No 38
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=95.90 E-value=0.017 Score=52.20 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=50.1
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH-
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE- 274 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~- 274 (288)
-.++|||..|+.|.++|....+++.+.+.. . + -+++.+.|+||++..++|..
T Consensus 250 i~~PvLii~G~~D~ivp~~~~~~l~~~i~~----------------------~---~--~~l~~~~~a~H~~~~e~pd~~ 302 (330)
T PLN02298 250 VSIPFIVLHGSADVVTDPDVSRALYEEAKS----------------------E---D--KTIKIYDGMMHSLLFGEPDEN 302 (330)
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHHhcc----------------------C---C--ceEEEcCCcEeeeecCCCHHH
Confidence 368999999999999999999988887742 1 4 67788999999999999964
Q ss_pred ---HHHHHHHHhc
Q 023030 275 ---CLGMIDRWFA 284 (288)
Q Consensus 275 ---~~~m~~~fi~ 284 (288)
...-+.+||.
T Consensus 303 ~~~~~~~i~~fl~ 315 (330)
T PLN02298 303 IEIVRRDILSWLN 315 (330)
T ss_pred HHHHHHHHHHHHH
Confidence 4555666764
No 39
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=95.74 E-value=0.027 Score=48.07 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=42.7
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.++|||..|+.|..+. ..... . + .+++.|.++||+++.++|++.
T Consensus 187 i~~P~lii~G~~D~~~~-----~~~~~-------------------------~---~--~~~~~i~~~gH~~~~e~p~~~ 231 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQ-----ALAQQ-------------------------L---A--LPLHVIPNAGHNAHRENPAAF 231 (242)
T ss_pred cCCCeEEEEeCCcchHH-----HHHHH-------------------------h---c--CeEEEeCCCCCchhhhChHHH
Confidence 46899999999997542 11111 1 3 667889999999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
.+.|..|+.
T Consensus 232 ~~~i~~fl~ 240 (242)
T PRK11126 232 AASLAQILR 240 (242)
T ss_pred HHHHHHHHh
Confidence 999999985
No 40
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.72 E-value=0.047 Score=40.84 Aligned_cols=60 Identities=23% Similarity=0.281 Sum_probs=50.2
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
..+|||.+|..|.++|+.+.++..+.|. + =.++++.++||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~---------------------------~--s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP---------------------------G--SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC---------------------------C--ceEEEEeccCcceecCCChHHH
Confidence 4899999999999999999999999984 4 5669999999998754446667
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
+++.+|+..
T Consensus 85 ~~v~~yl~~ 93 (103)
T PF08386_consen 85 KAVDDYLLD 93 (103)
T ss_pred HHHHHHHHc
Confidence 888888753
No 41
>PRK06489 hypothetical protein; Provisional
Probab=95.65 E-value=0.037 Score=50.83 Aligned_cols=61 Identities=20% Similarity=0.166 Sum_probs=48.7
Q ss_pred cCceEEEEccCCccccccHHH--HHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCC----CccCCC
Q 023030 196 KGYQVLIYSGDVDMKVPYVAT--EAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGA----GHTAPE 269 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~--~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~A----GH~vP~ 269 (288)
-.++|||..|+.|.++|.... ++..+.+ . + -.+++|.+| ||++.
T Consensus 291 I~~PvLvI~G~~D~~~p~~~~~~~~la~~i------------------------p---~--a~l~~i~~a~~~~GH~~~- 340 (360)
T PRK06489 291 IKAPVLAINSADDERNPPETGVMEAALKRV------------------------K---H--GRLVLIPASPETRGHGTT- 340 (360)
T ss_pred CCCCEEEEecCCCcccChhhHHHHHHHHhC------------------------c---C--CeEEEECCCCCCCCcccc-
Confidence 368999999999999987654 3344444 2 4 778999996 99985
Q ss_pred CCcHHHHHHHHHHhcCC
Q 023030 270 YKPKECLGMIDRWFACH 286 (288)
Q Consensus 270 dqP~~~~~m~~~fi~~~ 286 (288)
++|++..+.|.+|+...
T Consensus 341 e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 341 GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred cCHHHHHHHHHHHHHhc
Confidence 89999999999999643
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=95.61 E-value=0.037 Score=46.33 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=44.9
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-.+++|+.+|..|..++-. .+.+.+.+ . + .+++++.++||+++.++|+..
T Consensus 193 ~~~P~l~i~g~~D~~~~~~-~~~~~~~~------------------------~---~--~~~~~~~~~gH~~~~e~~~~~ 242 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFVQI-AKEMQKLL------------------------P---N--LTLVIIANAGHNIHLENPEAF 242 (251)
T ss_pred CCCceEEEeeCcchHHHHH-HHHHHhcC------------------------C---C--CcEEEEcCCCCCcCccChHHH
Confidence 4689999999999765321 12222221 2 4 778899999999999999999
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
...|..|+.
T Consensus 243 ~~~i~~~l~ 251 (251)
T TIGR03695 243 AKILLAFLE 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999984
No 43
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=95.37 E-value=0.041 Score=50.23 Aligned_cols=59 Identities=17% Similarity=0.292 Sum_probs=48.2
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
+-.++||+..|+.|.++|.... +.+ +. + +++..+.++||+...++|+.
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~----~~l-----------------------~~---~--~~~~~~~~~gH~~~~e~p~~ 359 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHA----QGL-----------------------PD---G--VAVHVLPGAGHMPQMEAAAD 359 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHH----hhc-----------------------cC---C--CeEEEeCCCCCChhhhCHHH
Confidence 3468999999999999986532 222 13 4 78889999999999999999
Q ss_pred HHHHHHHHhcC
Q 023030 275 CLGMIDRWFAC 285 (288)
Q Consensus 275 ~~~m~~~fi~~ 285 (288)
..+.|..|+.+
T Consensus 360 ~~~~i~~fl~~ 370 (371)
T PRK14875 360 VNRLLAEFLGK 370 (371)
T ss_pred HHHHHHHHhcc
Confidence 99999999965
No 44
>PRK10749 lysophospholipase L2; Provisional
Probab=95.01 E-value=0.053 Score=49.18 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=50.8
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCc---H
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKP---K 273 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP---~ 273 (288)
.++|||..|..|.+++..+.+.+.+.+.=.+. ... + .+++.+.||||++..++| +
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~-----------------~~~---~--~~l~~~~gagH~~~~E~~~~r~ 316 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGH-----------------PCE---G--GKPLVIKGAYHEILFEKDAMRS 316 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCC-----------------CCC---C--ceEEEeCCCcchhhhCCcHHHH
Confidence 58999999999999999999888877631000 001 3 678999999999999988 4
Q ss_pred HHHHHHHHHhcCC
Q 023030 274 ECLGMIDRWFACH 286 (288)
Q Consensus 274 ~~~~m~~~fi~~~ 286 (288)
.+++-+..||...
T Consensus 317 ~v~~~i~~fl~~~ 329 (330)
T PRK10749 317 VALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHhhc
Confidence 4556667777643
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=94.97 E-value=0.073 Score=48.41 Aligned_cols=62 Identities=19% Similarity=0.291 Sum_probs=51.6
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCC-cHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYK-PKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dq-P~~~ 275 (288)
.+++|+.+|+.|.+++..+++.+.+++.- . + -++..+.|++|+...+. ++.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~----------------------~---~--~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSI----------------------S---N--KELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccC----------------------C---C--cEEEEECCCCCCCccCCCHHHH
Confidence 58999999999999999999988877631 1 3 66678899999999885 6888
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
++-+..||.+
T Consensus 323 ~~~i~~wL~~ 332 (332)
T TIGR01607 323 LKKIIEWISN 332 (332)
T ss_pred HHHHHHHhhC
Confidence 8889899864
No 46
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=94.76 E-value=0.061 Score=50.26 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=51.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCC-CcHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEY-KPKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~d-qP~~~ 275 (288)
.+++||.+|+.|.++|...++.+.+.+.= . . -++..+.|+||++..+ .|+.+
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~~----------------------~---~--k~l~~~~ga~H~l~~e~~~e~v 376 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAAS----------------------R---H--KDIKLYDGFLHDLLFEPEREEV 376 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcCC----------------------C---C--ceEEEECCCeEEeccCCCHHHH
Confidence 69999999999999999999998887631 0 2 3446689999999776 79999
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
.+.+..||.+
T Consensus 377 ~~~I~~FL~~ 386 (395)
T PLN02652 377 GRDIIDWMEK 386 (395)
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 47
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=94.09 E-value=0.11 Score=43.37 Aligned_cols=57 Identities=28% Similarity=0.277 Sum_probs=49.1
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
+..+++|+.+|..|.++|....+...+.+. + -.++.+.++||....+.|..
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~---------------------------~--~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP---------------------------N--SQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST---------------------------T--EEEEEETTCCSTHHHHSHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC---------------------------C--CEEEECCCCChHHHhcCHHh
Confidence 357999999999999999998888555552 5 78899999999999999999
Q ss_pred HHHHHH
Q 023030 275 CLGMID 280 (288)
Q Consensus 275 ~~~m~~ 280 (288)
.-++|.
T Consensus 224 ~~~~i~ 229 (230)
T PF00561_consen 224 FNEIII 229 (230)
T ss_dssp HHHHHH
T ss_pred hhhhhc
Confidence 988875
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=93.19 E-value=0.11 Score=50.41 Aligned_cols=59 Identities=15% Similarity=0.108 Sum_probs=45.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.+++||.+|+.|.++|....+.+.+.+ . + ..++++ .+||+++.+.|++..
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~~------------------------~---~--~~~~~~-~~gH~~~~e~p~~~~ 282 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRWV------------------------P---R--LWRREI-KAGHWLPMSHPQVLA 282 (582)
T ss_pred cCceEEEEeCCCcccCHHHhccccccC------------------------C---c--ceEEEc-cCCCcchhhChhHHH
Confidence 588999999999999976554433222 1 3 555555 579999999999999
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
+.+..|+..
T Consensus 283 ~~i~~fl~~ 291 (582)
T PRK05855 283 AAVAEFVDA 291 (582)
T ss_pred HHHHHHHHh
Confidence 999999863
No 49
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.18 E-value=0.25 Score=41.52 Aligned_cols=63 Identities=21% Similarity=0.260 Sum_probs=45.0
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCC-cHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYK-PKE 274 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dq-P~~ 274 (288)
...+|||.+|+.|.+||...++.+.+.|.-. + .. ..+++.+++||-....+ ...
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~---------------------g--~~--~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA---------------------G--KP--VELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT---------------------T--SS--EEEEEETT-SSSTTSHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc---------------------C--CC--EEEEEcCcCCCCCCCchhHHH
Confidence 4799999999999999999999999988521 1 14 89999999999655332 223
Q ss_pred HHHHHHHHh
Q 023030 275 CLGMIDRWF 283 (288)
Q Consensus 275 ~~~m~~~fi 283 (288)
..+.+-.|+
T Consensus 198 ~~~~~~~f~ 206 (213)
T PF00326_consen 198 WYERILDFF 206 (213)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444444
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=93.10 E-value=0.19 Score=55.32 Aligned_cols=73 Identities=10% Similarity=0.158 Sum_probs=50.1
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEE-EEEeecCCceeEEEEEcCCCccCCCCCcH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYW-YRYKEKNNYHLTFATVKGAGHTAPEYKPK 273 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~-~~~~~~~~~~ltf~~V~~AGH~vP~dqP~ 273 (288)
+-.+++||..|+.|.+++ ...+++.+.+.= . +.+-. .... . ..++.|.+|||+++.++|+
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~--a-----------~~~~~~~~~~---~--a~lvvI~~aGH~~~lE~Pe 1626 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIGK--S-----------KESGNDKGKE---I--IEIVEIPNCGHAVHLENPL 1626 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHccc--c-----------cccccccccc---c--eEEEEECCCCCchHHHCHH
Confidence 346899999999999875 333444444420 0 00000 0011 3 5789999999999999999
Q ss_pred HHHHHHHHHhcCC
Q 023030 274 ECLGMIDRWFACH 286 (288)
Q Consensus 274 ~~~~m~~~fi~~~ 286 (288)
+..+.+.+|+.+.
T Consensus 1627 ~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1627 PVIRALRKFLTRL 1639 (1655)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999753
No 51
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.97 E-value=0.27 Score=44.59 Aligned_cols=62 Identities=26% Similarity=0.185 Sum_probs=47.6
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
++.++|++..|+.|++--..|.+. .+.|. -. . -..+.|.+|||.|=.|+|+.
T Consensus 301 ~~~~pv~fiyG~~dWmD~~~g~~~-~~~~~----------------------~~---~--~~~~~v~~aGHhvylDnp~~ 352 (365)
T KOG4409|consen 301 KKDVPVTFIYGDRDWMDKNAGLEV-TKSLM----------------------KE---Y--VEIIIVPGAGHHVYLDNPEF 352 (365)
T ss_pred ccCCCEEEEecCcccccchhHHHH-HHHhh----------------------cc---c--ceEEEecCCCceeecCCHHH
Confidence 457999999999999877666543 33321 01 3 66799999999999999999
Q ss_pred HHHHHHHHhc
Q 023030 275 CLGMIDRWFA 284 (288)
Q Consensus 275 ~~~m~~~fi~ 284 (288)
=-+.+..++.
T Consensus 353 Fn~~v~~~~~ 362 (365)
T KOG4409|consen 353 FNQIVLEECD 362 (365)
T ss_pred HHHHHHHHHh
Confidence 8888877764
No 52
>PRK11460 putative hydrolase; Provisional
Probab=92.47 E-value=0.25 Score=42.49 Aligned_cols=63 Identities=14% Similarity=0.097 Sum_probs=47.5
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
...+||+.+|..|.++|....++..+.|.= .+ .+ .++.+++++||.++.+.-+.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~---------------------~g--~~--~~~~~~~~~gH~i~~~~~~~~ 201 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALIS---------------------LG--GD--VTLDIVEDLGHAIDPRLMQFA 201 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHH---------------------CC--CC--eEEEEECCCCCCCCHHHHHHH
Confidence 468999999999999999998888877731 01 14 788889999999975555555
Q ss_pred HHHHHHHh
Q 023030 276 LGMIDRWF 283 (288)
Q Consensus 276 ~~m~~~fi 283 (288)
.+-|.+++
T Consensus 202 ~~~l~~~l 209 (232)
T PRK11460 202 LDRLRYTV 209 (232)
T ss_pred HHHHHHHc
Confidence 55555554
No 53
>PLN02511 hydrolase
Probab=91.81 E-value=0.22 Score=46.40 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=44.5
Q ss_pred cCceEEEEccCCccccccHHHH-HHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATE-AWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~-~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
-.+++||.+|+.|.++|..... ..+..+ . + ..++++.++||+...++|..
T Consensus 297 I~vPtLiI~g~dDpi~p~~~~~~~~~~~~------------------------p---~--~~l~~~~~gGH~~~~E~p~~ 347 (388)
T PLN02511 297 VRVPLLCIQAANDPIAPARGIPREDIKAN------------------------P---N--CLLIVTPSGGHLGWVAGPEA 347 (388)
T ss_pred CCCCeEEEEcCCCCcCCcccCcHhHHhcC------------------------C---C--EEEEECCCcceeccccCCCC
Confidence 4689999999999999875432 122222 2 5 88999999999999999865
Q ss_pred ------HHHHHHHHhc
Q 023030 275 ------CLGMIDRWFA 284 (288)
Q Consensus 275 ------~~~m~~~fi~ 284 (288)
+.+.+..|+.
T Consensus 348 ~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 348 PFGAPWTDPVVMEFLE 363 (388)
T ss_pred CCCCccHHHHHHHHHH
Confidence 3566666663
No 54
>PRK10566 esterase; Provisional
Probab=91.39 E-value=0.33 Score=41.58 Aligned_cols=62 Identities=26% Similarity=0.230 Sum_probs=46.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
..++|+.+|..|.++|...++.+.+.++=.+. .. + +++++..|+||... | ..+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~---~--~~~~~~~~~~H~~~---~-~~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DK---N--LTCLWEPGVRHRIT---P-EAL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------Cc---c--eEEEecCCCCCccC---H-HHH
Confidence 47999999999999999999888887742111 01 4 89999999999974 3 456
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
+-+.+||..
T Consensus 239 ~~~~~fl~~ 247 (249)
T PRK10566 239 DAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHh
Confidence 666667653
No 55
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=91.02 E-value=0.66 Score=40.83 Aligned_cols=59 Identities=17% Similarity=0.035 Sum_probs=48.8
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.+++|+..|..|.++|..-.+++++.+. . -++++|. +||++...+|+..-
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~---------------------------~--~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP---------------------------P--SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC---------------------------c--cEEEEEC-CCCCccccCHHHHH
Confidence 5899999999999999987777777653 2 3456674 99999999999999
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
++|..+...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999987654
No 56
>PLN02872 triacylglycerol lipase
Probab=90.59 E-value=0.62 Score=43.53 Aligned_cols=60 Identities=12% Similarity=0.150 Sum_probs=48.8
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCcc---CCCCCcH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHT---APEYKPK 273 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~---vP~dqP~ 273 (288)
.++|+||.|..|.+++....+++.+.|. . . -.+..+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp-----------------------~---~--~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP-----------------------S---K--PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC-----------------------C---c--cEEEEcCCCCCHHHHhCcchHH
Confidence 5799999999999999999999998884 0 1 344567999996 3458899
Q ss_pred HHHHHHHHHhc
Q 023030 274 ECLGMIDRWFA 284 (288)
Q Consensus 274 ~~~~m~~~fi~ 284 (288)
..++-+..|+.
T Consensus 377 ~V~~~Il~fL~ 387 (395)
T PLN02872 377 DVYNHMIQFFR 387 (395)
T ss_pred HHHHHHHHHHH
Confidence 98888888875
No 57
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=90.53 E-value=1.2 Score=39.67 Aligned_cols=43 Identities=23% Similarity=0.296 Sum_probs=36.0
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCC
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAP 268 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP 268 (288)
.+++||.+|+.|.+||....+.+.+.+. + ..++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~---------------------------~--~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP---------------------------E--AELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC---------------------------C--CEEEEECCCCCCCC
Confidence 5899999999999999988777776652 4 67788999999973
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=89.98 E-value=0.75 Score=35.46 Aligned_cols=46 Identities=28% Similarity=0.318 Sum_probs=36.8
Q ss_pred HHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCcc
Q 023030 193 LIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHT 266 (288)
Q Consensus 193 Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~ 266 (288)
+-...++|++..|..|.+++....+++.+.+. . . -.++.|.|+||+
T Consensus 100 ~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~---~--~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------G---P--KELYIIPGAGHF 145 (145)
T ss_dssp HTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------S---S--EEEEEETTS-TT
T ss_pred hhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------C---C--cEEEEeCCCcCc
Confidence 44557899999999999999999998888885 1 4 777999999996
No 59
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=89.46 E-value=0.75 Score=41.06 Aligned_cols=66 Identities=27% Similarity=0.402 Sum_probs=49.2
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCC--CCCcHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAP--EYKPKE 274 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP--~dqP~~ 274 (288)
+.+|+||+|..|-++|+..+++.++++-=.|. . + ++|.++.++||+.. ...|.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a---~--V~~~~~~~~~H~~~~~~~~~~a 274 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------A---D--VEYVRYPGGGHLGAAFASAPDA 274 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------C---C--EEEEecCCCChhhhhhcCcHHH
Confidence 58999999999999999999999988631110 1 4 99999999999964 466666
Q ss_pred HHHHHHHHhcCCC
Q 023030 275 CLGMIDRWFACHP 287 (288)
Q Consensus 275 ~~~m~~~fi~~~~ 287 (288)
.--|-+|| .|+|
T Consensus 275 ~~Wl~~rf-~G~~ 286 (290)
T PF03583_consen 275 LAWLDDRF-AGKP 286 (290)
T ss_pred HHHHHHHH-CCCC
Confidence 65555555 3443
No 60
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=89.21 E-value=0.93 Score=39.89 Aligned_cols=72 Identities=15% Similarity=0.181 Sum_probs=46.8
Q ss_pred HHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccC-CC
Q 023030 191 RNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTA-PE 269 (288)
Q Consensus 191 ~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~v-P~ 269 (288)
..|.+.++++|+..|..|... ..|.+.+.-. ..|+.- . ... + .+++++.+|||.+ +.
T Consensus 201 ~~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~~---------l-~~~---~--v~~~~~~~~~H~l~~e 258 (274)
T TIGR03100 201 AGLERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRGA---------L-EDP---G--IERVEIDGADHTFSDR 258 (274)
T ss_pred HHHHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHHH---------h-hcC---C--eEEEecCCCCcccccH
Confidence 344455799999999999863 2333332110 001100 0 012 5 8999999999998 56
Q ss_pred CCcHHHHHHHHHHhc
Q 023030 270 YKPKECLGMIDRWFA 284 (288)
Q Consensus 270 dqP~~~~~m~~~fi~ 284 (288)
+.|+...+.|.+||.
T Consensus 259 ~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 259 VWREWVAARTTEWLR 273 (274)
T ss_pred HHHHHHHHHHHHHHh
Confidence 666999999999984
No 61
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=88.74 E-value=0.89 Score=40.86 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=27.6
Q ss_pred eEEEEEcCCCccCCCCCcHHHHHHHHHHhcC
Q 023030 255 LTFATVKGAGHTAPEYKPKECLGMIDRWFAC 285 (288)
Q Consensus 255 ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~ 285 (288)
..+..+.+|||+|..|+|+...+.|..|+..
T Consensus 282 ~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 282 VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 6667888899999999999999999999853
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.74 E-value=1.6 Score=36.04 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=45.0
Q ss_pred hcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHH
Q 023030 195 KKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKE 274 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~ 274 (288)
...+++|+..|+.|.+.+....+.+...+.. . ..++++.++||+...++|+.
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~--------------------------~--~~~~~~~~~gH~~~~~~p~~ 270 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN--------------------------D--ARLVVIPGAGHFPHLEAPEA 270 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC--------------------------C--ceEEEeCCCCCcchhhcHHH
Confidence 3469999999999966665544444444421 2 56789999999999999998
Q ss_pred HHHHHHHHh
Q 023030 275 CLGMIDRWF 283 (288)
Q Consensus 275 ~~~m~~~fi 283 (288)
..+.+..|+
T Consensus 271 ~~~~i~~~~ 279 (282)
T COG0596 271 FAAALLAFL 279 (282)
T ss_pred HHHHHHHHH
Confidence 777777654
No 63
>PRK13604 luxD acyl transferase; Provisional
Probab=88.20 E-value=2.1 Score=38.56 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=45.6
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
-..+||+++|+.|.+||..+++.+.+++. .+ + -.+..+.||+|... ..+...
T Consensus 201 l~~PvLiIHG~~D~lVp~~~s~~l~e~~~----------------------s~---~--kkl~~i~Ga~H~l~-~~~~~~ 252 (307)
T PRK13604 201 LDIPFIAFTANNDSWVKQSEVIDLLDSIR----------------------SE---Q--CKLYSLIGSSHDLG-ENLVVL 252 (307)
T ss_pred cCCCEEEEEcCCCCccCHHHHHHHHHHhc----------------------cC---C--cEEEEeCCCccccC-cchHHH
Confidence 35899999999999999999999998863 12 4 78899999999873 455555
Q ss_pred HHHHHH
Q 023030 276 LGMIDR 281 (288)
Q Consensus 276 ~~m~~~ 281 (288)
..+.++
T Consensus 253 ~~~~~~ 258 (307)
T PRK13604 253 RNFYQS 258 (307)
T ss_pred HHHHHH
Confidence 555444
No 64
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=87.93 E-value=0.8 Score=38.69 Aligned_cols=59 Identities=27% Similarity=0.374 Sum_probs=40.9
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
+.+|++.+|+.|.++|....+...+.|.=. + .+ ++|.+..|.||.++ .+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~---------------------~--~~--v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA---------------------G--AN--VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT---------------------T---G--EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc---------------------C--CC--EEEEEcCCCCCCCC----HHHH
Confidence 678999999999999998877776666210 1 14 89999999999996 4666
Q ss_pred HHHHHHhc
Q 023030 277 GMIDRWFA 284 (288)
Q Consensus 277 ~m~~~fi~ 284 (288)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66777764
No 65
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=86.73 E-value=1.6 Score=39.81 Aligned_cols=62 Identities=21% Similarity=0.217 Sum_probs=46.6
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCc---
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKP--- 272 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP--- 272 (288)
-.++||+..|..|.++|....+.+.+.+.= . . .+++.+ .+||+.+.+.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~----------------------~---~--~~~~~~-~~gH~~~~~~~~~~ 336 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVSS----------------------E---D--YTELSF-PGGHIGIYVSGKAQ 336 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcCC----------------------C---C--eEEEEc-CCCCEEEEECchhH
Confidence 368999999999999999998888887630 1 2 555554 48999988876
Q ss_pred HHHHHHHHHHhcC
Q 023030 273 KECLGMIDRWFAC 285 (288)
Q Consensus 273 ~~~~~m~~~fi~~ 285 (288)
+.+..-+..||..
T Consensus 337 ~~v~~~i~~wl~~ 349 (350)
T TIGR01836 337 KEVPPAIGKWLQA 349 (350)
T ss_pred hhhhHHHHHHHHh
Confidence 5566667777753
No 66
>PRK10985 putative hydrolase; Provisional
Probab=86.53 E-value=2.2 Score=38.43 Aligned_cols=47 Identities=17% Similarity=0.056 Sum_probs=35.9
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCC
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYK 271 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dq 271 (288)
-.+++|+.+|+.|.+++....+.. .++. . + ++++.+.++||+.+.+.
T Consensus 254 i~~P~lii~g~~D~~~~~~~~~~~-~~~~-----------------------~---~--~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 254 IRKPTLIIHAKDDPFMTHEVIPKP-ESLP-----------------------P---N--VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCCEEEEecCCCCCCChhhChHH-HHhC-----------------------C---C--eEEEECCCCCceeeCCC
Confidence 368999999999999987655543 2221 2 5 88899999999988753
No 67
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=85.70 E-value=1.6 Score=43.37 Aligned_cols=60 Identities=17% Similarity=0.324 Sum_probs=48.0
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
..++||.+|..|..|+..-++++...|.-.+. . ..+++.++.||-.+. |+...
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~-----------------------~--~~~~~~p~e~H~~~~--~~~~~ 603 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK-----------------------P--VELVVFPDEGHGFSR--PENRV 603 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCc-----------------------e--EEEEEeCCCCcCCCC--chhHH
Confidence 57999999999999999999999999953221 4 788999999999886 66666
Q ss_pred HHHHHHh
Q 023030 277 GMIDRWF 283 (288)
Q Consensus 277 ~m~~~fi 283 (288)
++++.++
T Consensus 604 ~~~~~~~ 610 (620)
T COG1506 604 KVLKEIL 610 (620)
T ss_pred HHHHHHH
Confidence 5555543
No 68
>COG0400 Predicted esterase [General function prediction only]
Probab=84.61 E-value=1.6 Score=36.97 Aligned_cols=60 Identities=27% Similarity=0.400 Sum_probs=44.2
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
++.+||+.+|..|.+||..-.++..+.|.=. + .+ ..+.++. .||.+| .+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~---------------------g--~~--v~~~~~~-~GH~i~----~e~ 194 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTAS---------------------G--AD--VEVRWHE-GGHEIP----PEE 194 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHc---------------------C--CC--EEEEEec-CCCcCC----HHH
Confidence 5799999999999999999998888777311 1 13 6666666 999996 445
Q ss_pred HHHHHHHhcC
Q 023030 276 LGMIDRWFAC 285 (288)
Q Consensus 276 ~~m~~~fi~~ 285 (288)
++.+++|+.+
T Consensus 195 ~~~~~~wl~~ 204 (207)
T COG0400 195 LEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHh
Confidence 5555567654
No 69
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=84.37 E-value=2.1 Score=38.33 Aligned_cols=63 Identities=21% Similarity=0.233 Sum_probs=52.2
Q ss_pred cCceEEEEccCCccccc-cHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcH-
Q 023030 196 KGYQVLIYSGDVDMKVP-YVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPK- 273 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~-~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~- 273 (288)
..++|||.+|..|.++. ..+..++.+.++- . + .+++.+.||.|.+-.+.+.
T Consensus 227 ~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~----------------------~---~--~~~~~~~g~~He~~~E~~~~ 279 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVEGLARFFERAGS----------------------P---D--KELKVIPGAYHELLNEPDRA 279 (298)
T ss_pred ccCCEEEEecCCCccccCcHHHHHHHHhcCC----------------------C---C--ceEEecCCcchhhhcCcchH
Confidence 36999999999999999 6888889888852 2 4 7789999999999877754
Q ss_pred --HHHHHHHHHhcC
Q 023030 274 --ECLGMIDRWFAC 285 (288)
Q Consensus 274 --~~~~m~~~fi~~ 285 (288)
.+++.+..|+..
T Consensus 280 r~~~~~~~~~~l~~ 293 (298)
T COG2267 280 REEVLKDILAWLAE 293 (298)
T ss_pred HHHHHHHHHHHHHh
Confidence 778888888764
No 70
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=83.35 E-value=1.7 Score=42.22 Aligned_cols=48 Identities=19% Similarity=0.151 Sum_probs=38.4
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPK 273 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~ 273 (288)
.+++|+..|..|-++|+...+.+.+.+. + -...++.++||+++.++|.
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~---------------------------~--~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG---------------------------G--PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC---------------------------C--CEEEEECCCCCchHhhCCC
Confidence 4789999999999999999887776653 2 3335788999998877774
No 71
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=82.83 E-value=2.4 Score=40.71 Aligned_cols=81 Identities=19% Similarity=0.315 Sum_probs=58.6
Q ss_pred HHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccC
Q 023030 188 AYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTA 267 (288)
Q Consensus 188 ~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~v 267 (288)
|-|..+.++|=|+|+|+|-.|.+++..++.++-+++.= ..+|-..... +- +.|..|+|-||--
T Consensus 344 pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~-------------~~g~~~~~v~--dF--~RlF~vPGm~HC~ 406 (474)
T PF07519_consen 344 PDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVA-------------RMGGALADVD--DF--YRLFMVPGMGHCG 406 (474)
T ss_pred cCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHH-------------hccccccccc--ce--eEEEecCCCcccC
Confidence 44666777899999999999999999999998877631 1111100001 12 6778999999964
Q ss_pred --CCCCcHHHHHHHHHHhcC
Q 023030 268 --PEYKPKECLGMIDRWFAC 285 (288)
Q Consensus 268 --P~dqP~~~~~m~~~fi~~ 285 (288)
|-..|-.++.-|.+|+.+
T Consensus 407 gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 407 GGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCCCCCCCCHHHHHHHHHhC
Confidence 555777899999999864
No 72
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=77.18 E-value=4.2 Score=33.25 Aligned_cols=43 Identities=19% Similarity=0.379 Sum_probs=34.8
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCC
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPE 269 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~ 269 (288)
.++.+++..+.|..||+.-++.+.+.| + -.++.+.++||+-..
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l----------------------------~--a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL----------------------------G--AELIILGGGGHFNAA 156 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH----------------------------T---EEEEETS-TTSSGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc----------------------------C--CCeEECCCCCCcccc
Confidence 355689999999999999999999998 4 778999999999764
No 73
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=74.68 E-value=5.5 Score=34.75 Aligned_cols=59 Identities=27% Similarity=0.330 Sum_probs=43.2
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
..+|||++|..|-++|+.-..+.-.... +. ....+|+||||--+.- +..-.
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k--------------------------~~--~epl~v~g~gH~~~~~-~~~yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK--------------------------EK--VEPLWVKGAGHNDIEL-YPEYI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc--------------------------cc--CCCcEEecCCCccccc-CHHHH
Confidence 5799999999999999987776555532 13 6668999999987544 44455
Q ss_pred HHHHHHhc
Q 023030 277 GMIDRWFA 284 (288)
Q Consensus 277 ~m~~~fi~ 284 (288)
+.+++|+.
T Consensus 243 ~~l~~f~~ 250 (258)
T KOG1552|consen 243 EHLRRFIS 250 (258)
T ss_pred HHHHHHHH
Confidence 66666654
No 74
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=73.11 E-value=10 Score=35.65 Aligned_cols=57 Identities=12% Similarity=-0.030 Sum_probs=45.7
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.++||+.+|..|.++|....+.+.+.. . + ..++.+.++ |+ .++|..++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~------------------------~---~--~~l~~i~~~-~~--~e~~~~~~ 402 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS------------------------A---D--GKLLEIPFK-PV--YRNFDKAL 402 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC------------------------C---C--CeEEEccCC-Cc--cCCHHHHH
Confidence 579999999999999999988666544 1 3 566888887 43 35999999
Q ss_pred HHHHHHhcC
Q 023030 277 GMIDRWFAC 285 (288)
Q Consensus 277 ~m~~~fi~~ 285 (288)
..+.+||..
T Consensus 403 ~~i~~wL~~ 411 (414)
T PRK05077 403 QEISDWLED 411 (414)
T ss_pred HHHHHHHHH
Confidence 999999864
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=61.84 E-value=12 Score=39.39 Aligned_cols=59 Identities=17% Similarity=0.230 Sum_probs=45.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEE-EEEcCCCccCCC---CCc
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTF-ATVKGAGHTAPE---YKP 272 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf-~~V~~AGH~vP~---dqP 272 (288)
.+++|+..|..|.++|....+.+.+.+. + ..+ ..+.++|||.++ --|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~---------------------------~--a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP---------------------------N--AEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC---------------------------C--CeEEEEeCCCCCEeeeechhhh
Confidence 4799999999999999999988877662 3 444 567899999653 346
Q ss_pred HHHHHHHHHHhc
Q 023030 273 KECLGMIDRWFA 284 (288)
Q Consensus 273 ~~~~~m~~~fi~ 284 (288)
+.....+.+||.
T Consensus 348 ~~~wp~i~~wl~ 359 (994)
T PRK07868 348 QQTWPTVADWVK 359 (994)
T ss_pred hhhChHHHHHHH
Confidence 666677888875
No 76
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=60.69 E-value=12 Score=31.55 Aligned_cols=49 Identities=24% Similarity=0.198 Sum_probs=28.3
Q ss_pred cCceEEEEccCCccccccHHH-HHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccC
Q 023030 196 KGYQVLIYSGDVDMKVPYVAT-EAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTA 267 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~-~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~v 267 (288)
.+.+||+.+|..|.+-|..-. +..++.|.=.+. - .+ ++.+.-.+|||+.
T Consensus 114 i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~---------------~------~~--~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 114 IKGPILLISGEDDQIWPSSEMAEQIEERLKAAGF---------------P------HN--VEHLSYPGAGHLI 163 (213)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT----------------------------EEEEETTB-S--
T ss_pred cCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC---------------C------Cc--ceEEEcCCCCcee
Confidence 378999999999999877654 455566742111 0 14 7888889999985
No 77
>PRK11071 esterase YqiA; Provisional
Probab=59.15 E-value=24 Score=29.10 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=42.9
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHH
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKEC 275 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~ 275 (288)
...+|+|..|..|-++|+....+..+. ...+.+.||+|-- ...+..
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f--~~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAF--VGFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcch--hhHHHh
Confidence 356889999999999999987765552 2335779999987 344889
Q ss_pred HHHHHHHhc
Q 023030 276 LGMIDRWFA 284 (288)
Q Consensus 276 ~~m~~~fi~ 284 (288)
++.+..|+.
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 999999874
No 78
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=58.40 E-value=34 Score=29.30 Aligned_cols=46 Identities=22% Similarity=0.261 Sum_probs=36.0
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCc
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKP 272 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP 272 (288)
.++-|-+-|+.|.+++..-++..++... + = .+..+-.||+||.-.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~---------------------------~--a-~vl~HpggH~VP~~~~ 208 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK---------------------------D--A-TVLEHPGGHIVPNKAK 208 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC---------------------------C--C-eEEecCCCccCCCchH
Confidence 5788888999999999998887777642 2 1 3777889999996653
No 79
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=55.22 E-value=4.8 Score=25.02 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=22.7
Q ss_pred CCCCcccccCcccchhhcccccCHHHHHHHh
Q 023030 28 PLTDSTENQNSVPHFAYLNALISHEIYESAK 58 (288)
Q Consensus 28 g~~dp~~q~~s~~~~~~~~gli~~~~~~~~~ 58 (288)
|.+||..-..--.+=|+..||||.+....+.
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~ 42 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLL 42 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHH
Confidence 6778876555455668999999999887765
No 80
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=52.44 E-value=14 Score=31.02 Aligned_cols=60 Identities=25% Similarity=0.229 Sum_probs=39.0
Q ss_pred HHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCc
Q 023030 193 LIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKP 272 (288)
Q Consensus 193 Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP 272 (288)
|...-..+||.+|+.|.++.. ...|.|... . . ++.+++.+|.|+-.- +-
T Consensus 145 l~P~P~~~lvi~g~~Ddvv~l------~~~l~~~~~-------------------~---~--~~~i~i~~a~HFF~g-Kl 193 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVVDL------VAVLKWQES-------------------I---K--ITVITIPGADHFFHG-KL 193 (210)
T ss_pred ccCCCCCceeEecChhhhhcH------HHHHHhhcC-------------------C---C--CceEEecCCCceecc-cH
Confidence 333457899999999955544 445555322 1 4 899999999999753 44
Q ss_pred HHHHHHHHHHh
Q 023030 273 KECLGMIDRWF 283 (288)
Q Consensus 273 ~~~~~m~~~fi 283 (288)
....+.+..|+
T Consensus 194 ~~l~~~i~~~l 204 (210)
T COG2945 194 IELRDTIADFL 204 (210)
T ss_pred HHHHHHHHHHh
Confidence 44445555554
No 81
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=51.70 E-value=66 Score=26.74 Aligned_cols=65 Identities=28% Similarity=0.311 Sum_probs=39.2
Q ss_pred HHhcCceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCc--cCC--
Q 023030 193 LIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGH--TAP-- 268 (288)
Q Consensus 193 Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH--~vP-- 268 (288)
.-+-..+||+..|..|..++....+...+.|.=. + .. +.+.+-.||+| +.+
T Consensus 141 ~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------------~--~~--~~~~~y~ga~HgF~~~~~ 195 (218)
T PF01738_consen 141 APKIKAPVLILFGENDPFFPPEEVEALEEALKAA---------------------G--VD--VEVHVYPGAGHGFANPSR 195 (218)
T ss_dssp GGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCT---------------------T--TT--EEEEEETT--TTTTSTTS
T ss_pred hcccCCCEeecCccCCCCCChHHHHHHHHHHHhc---------------------C--Cc--EEEEECCCCcccccCCCC
Confidence 3345789999999999999999888888887311 1 13 78888889999 343
Q ss_pred -CCCcHHHHHHHHHH
Q 023030 269 -EYKPKECLGMIDRW 282 (288)
Q Consensus 269 -~dqP~~~~~m~~~f 282 (288)
.+.++++.+..++.
T Consensus 196 ~~~~~~aa~~a~~~~ 210 (218)
T PF01738_consen 196 PPYDPAAAEDAWQRT 210 (218)
T ss_dssp TT--HHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHH
Confidence 33456666665554
No 82
>PLN02442 S-formylglutathione hydrolase
Probab=50.61 E-value=32 Score=30.28 Aligned_cols=49 Identities=16% Similarity=0.122 Sum_probs=35.9
Q ss_pred hcCceEEEEccCCccccccH-HHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCC
Q 023030 195 KKGYQVLIYSGDVDMKVPYV-ATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAP 268 (288)
Q Consensus 195 ~~~~rvliy~Gd~D~~~~~~-g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP 268 (288)
..+.+||+.+|+.|.+|+.. .++.+.+.+.= .+ .+ .++....|++|-.+
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~---------------------~g--~~--~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKE---------------------AG--AP--VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHH---------------------cC--CC--eEEEEeCCCCccHH
Confidence 34789999999999999974 46666666520 11 14 88899999999755
No 83
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=50.29 E-value=5.9 Score=24.33 Aligned_cols=17 Identities=29% Similarity=0.235 Sum_probs=14.1
Q ss_pred hhhhccCchhHHHHhCC
Q 023030 146 YSYIWANDKTVQRAIGV 162 (288)
Q Consensus 146 ~~~~ylN~~~V~~aL~v 162 (288)
.+-.-|++||||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 45567999999999986
No 84
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=48.99 E-value=53 Score=28.01 Aligned_cols=61 Identities=21% Similarity=0.317 Sum_probs=46.4
Q ss_pred ceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcH---H
Q 023030 198 YQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPK---E 274 (288)
Q Consensus 198 ~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~---~ 274 (288)
.++|+.+|..|.++|....+....... . .. ..++.+.+++|..+.+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-----------------------~--~~--~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-----------------------E--RP--KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-----------------------c--CC--ceEEEecCCccccccCccHHHHH
Confidence 799999999999999888777766642 1 03 6778899999999986666 5
Q ss_pred HHHHHHHHhcC
Q 023030 275 CLGMIDRWFAC 285 (288)
Q Consensus 275 ~~~m~~~fi~~ 285 (288)
++.-+..|+..
T Consensus 286 ~~~~~~~f~~~ 296 (299)
T COG1073 286 ALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHH
Confidence 66666666643
No 85
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.71 E-value=48 Score=28.77 Aligned_cols=59 Identities=20% Similarity=0.347 Sum_probs=44.9
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
.+.|.++.|+.|.+|...-...|-+..+ + . +++- +...|||-+..+.+...
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~---~--f~l~-~fdGgHFfl~~~~~~v~ 226 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------G---D--FTLR-VFDGGHFFLNQQREEVL 226 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------C---C--ceEE-EecCcceehhhhHHHHH
Confidence 5889999999999998877666655431 1 3 5544 45569999999999999
Q ss_pred HHHHHHhc
Q 023030 277 GMIDRWFA 284 (288)
Q Consensus 277 ~m~~~fi~ 284 (288)
..+.+.+.
T Consensus 227 ~~i~~~l~ 234 (244)
T COG3208 227 ARLEQHLA 234 (244)
T ss_pred HHHHHHhh
Confidence 88888774
No 86
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=44.20 E-value=23 Score=29.82 Aligned_cols=48 Identities=23% Similarity=0.228 Sum_probs=30.8
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPK 273 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~ 273 (288)
.+++|-..|..|.+++...++...+.. . + =..+..+..||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~------------------------~---~--~~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMF------------------------D---P--DARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHH------------------------H---H--HEEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhc------------------------c---C--CcEEEEECCCCcCcCChhh
Confidence 689999999999999988777776664 1 2 1557888999999987654
No 87
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=43.95 E-value=9.4 Score=33.94 Aligned_cols=62 Identities=19% Similarity=0.210 Sum_probs=43.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECL 276 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~ 276 (288)
+++||++.|+.-.... .+...-.+|+ . .+ -|++.|.++|=||-.+||....
T Consensus 219 ~c~vLlvvG~~Sp~~~--~vv~~ns~Ld-----------------------p--~~--ttllkv~dcGglV~eEqP~kla 269 (283)
T PF03096_consen 219 GCPVLLVVGDNSPHVD--DVVEMNSKLD-----------------------P--TK--TTLLKVADCGGLVLEEQPGKLA 269 (283)
T ss_dssp CS-EEEEEETTSTTHH--HHHHHHHHS------------------------C--CC--EEEEEETT-TT-HHHH-HHHHH
T ss_pred CCCeEEEEecCCcchh--hHHHHHhhcC-----------------------c--cc--ceEEEecccCCcccccCcHHHH
Confidence 5899999998754332 2234445563 1 14 8999999999999999999999
Q ss_pred HHHHHHhcCCC
Q 023030 277 GMIDRWFACHP 287 (288)
Q Consensus 277 ~m~~~fi~~~~ 287 (288)
+-|+-|+.|..
T Consensus 270 ea~~lFlQG~G 280 (283)
T PF03096_consen 270 EAFKLFLQGMG 280 (283)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHccCC
Confidence 99999998753
No 88
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=35.21 E-value=34 Score=29.20 Aligned_cols=26 Identities=19% Similarity=0.473 Sum_probs=21.5
Q ss_pred CceEEEEccCCccccccHHHHHHHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKS 222 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~ 222 (288)
+++++||+|+.|..|+....++.++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 68999999999999988876665554
No 89
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=34.64 E-value=1.4e+02 Score=27.78 Aligned_cols=64 Identities=16% Similarity=0.086 Sum_probs=42.4
Q ss_pred CceEEEEccCCccccccHHHHHHHHHcCCCCcccccccccCCEeeeEEEEEeecCCceeEEEEEcCCCccC-CCCCcHHH
Q 023030 197 GYQVLIYSGDVDMKVPYVATEAWIKSLNLTIETGWQPWFVEGQVAGYWYRYKEKNNYHLTFATVKGAGHTA-PEYKPKEC 275 (288)
Q Consensus 197 ~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~~~~~~~w~~~~~~~G~~~~~~~~~~~~ltf~~V~~AGH~v-P~dqP~~~ 275 (288)
.++-+|.+|--|-....-.+.-+.+.|. | . =.+..|+|+||.. -.+--.+.
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~-----------------------G---~--K~lr~vPN~~H~~~~~~~~~~l 313 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLP-----------------------G---E--KYLRYVPNAGHSLIGSDVVQSL 313 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCC-----------------------C---C--eeEEeCCCCCcccchHHHHHHH
Confidence 6888888888887766666777777773 1 2 3446789999964 43344444
Q ss_pred HHHHHHHhcCCCC
Q 023030 276 LGMIDRWFACHPL 288 (288)
Q Consensus 276 ~~m~~~fi~~~~~ 288 (288)
...+.+.+.|+++
T Consensus 314 ~~f~~~~~~~~~l 326 (367)
T PF10142_consen 314 RAFYNRIQNGRPL 326 (367)
T ss_pred HHHHHHHHcCCCC
Confidence 5556666667654
No 90
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.17 E-value=1.6e+02 Score=26.58 Aligned_cols=20 Identities=30% Similarity=0.458 Sum_probs=16.9
Q ss_pred eeEEEEEcCCCccCCCCCcH
Q 023030 254 HLTFATVKGAGHTAPEYKPK 273 (288)
Q Consensus 254 ~ltf~~V~~AGH~vP~dqP~ 273 (288)
.+.+.+|.|.||-.|.-.+.
T Consensus 263 ~V~~y~i~g~GH~wp~~~~~ 282 (312)
T COG3509 263 RVELYTIDGGGHTWPGGTQY 282 (312)
T ss_pred ceEEEEEeCCcccCcCCCCC
Confidence 59999999999999975554
No 91
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=29.42 E-value=45 Score=27.72 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=23.1
Q ss_pred ceEEEEccCCccccccHHHHHHHHHcC
Q 023030 198 YQVLIYSGDVDMKVPYVATEAWIKSLN 224 (288)
Q Consensus 198 ~rvliy~Gd~D~~~~~~g~~~~i~~l~ 224 (288)
-+++|++|..|.++|....+...+.|.
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 457899999999999999888887764
No 92
>smart00581 PSP proline-rich domain in spliceosome associated proteins.
Probab=29.36 E-value=38 Score=22.06 Aligned_cols=18 Identities=22% Similarity=0.608 Sum_probs=13.7
Q ss_pred chhHHHHhCCCCCCcccc
Q 023030 153 DKTVQRAIGVQEGTVKYW 170 (288)
Q Consensus 153 ~~~V~~aL~v~~~~~~~w 170 (288)
+.+.|+|||+.+.....|
T Consensus 10 S~~LR~ALG~~~~~pPPW 27 (54)
T smart00581 10 SDELREALGLPPGQPPPW 27 (54)
T ss_pred CHHHHHHcCCCCCCCChH
Confidence 478999999988654455
No 93
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=28.49 E-value=1.1e+02 Score=27.24 Aligned_cols=43 Identities=23% Similarity=0.381 Sum_probs=34.6
Q ss_pred ccchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCC
Q 023030 183 VSSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTI 227 (288)
Q Consensus 183 ~~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~ 227 (288)
...++.++..|.+.|++|++.+|-.+.. -..|++|+++.++++
T Consensus 147 lp~al~ly~~l~~~G~kIf~VSgR~e~~--r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 147 LPETLKNYNKLVSLGFKIIFLSGRLKDK--QAVTEANLKKAGYHT 189 (275)
T ss_pred ChHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHHHHHHHcCCCC
Confidence 4578888999999999999999987644 345889998887753
No 94
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=28.30 E-value=88 Score=26.96 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=27.7
Q ss_pred HhcCceEEEEccCCccccccHHHHHHHHHcC
Q 023030 194 IKKGYQVLIYSGDVDMKVPYVATEAWIKSLN 224 (288)
Q Consensus 194 l~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~ 224 (288)
++..+|||-.+|-.|-|+|......+++.+.
T Consensus 196 Id~~C~VLTvhGs~D~IVPve~AkefAk~i~ 226 (269)
T KOG4667|consen 196 IDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP 226 (269)
T ss_pred cCccCceEEEeccCCceeechhHHHHHHhcc
Confidence 3568999999999999999999999998874
No 95
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=28.10 E-value=1.1e+02 Score=26.47 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=33.7
Q ss_pred ccchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCC
Q 023030 183 VSSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTI 227 (288)
Q Consensus 183 ~~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~ 227 (288)
...++.++..|.+.|++|++.+|-.... -..|.+|+.++++++
T Consensus 122 ip~al~l~~~l~~~G~~Vf~lTGR~e~~--r~~T~~nL~~~G~~~ 164 (229)
T TIGR01675 122 LPEGLKLYQKIIELGIKIFLLSGRWEEL--RNATLDNLINAGFTG 164 (229)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHH--HHHHHHHHHHcCCCC
Confidence 3577788889999999999999986432 345788999988764
No 96
>PF05414 DUF1717: Viral domain of unknown function (DUF1717); InterPro: IPR008745 The domain is found towards the N terminus of the polyprotein of Apple stem grooving virus (strain P-209) (ASGV), Citrus tatter leaf virus and from Apple stem grooving virus (strain Korea) (ASGV) (Pear black necrotic leaf spot virus). Its function is unknown [, ].
Probab=27.71 E-value=37 Score=24.19 Aligned_cols=12 Identities=58% Similarity=0.985 Sum_probs=10.5
Q ss_pred cCceEEEEccCC
Q 023030 196 KGYQVLIYSGDV 207 (288)
Q Consensus 196 ~~~rvliy~Gd~ 207 (288)
-|+||+||.||.
T Consensus 39 lgyrVhiyyGdS 50 (101)
T PF05414_consen 39 LGYRVHIYYGDS 50 (101)
T ss_pred cccEEEEEecce
Confidence 389999999975
No 97
>PF04046 PSP: PSP; InterPro: IPR006568 PSP is a proline-rich domain of unknown function found in spliceosome associated proteins.
Probab=26.04 E-value=49 Score=21.01 Aligned_cols=18 Identities=28% Similarity=0.619 Sum_probs=13.5
Q ss_pred chhHHHHhCCCCCCcccc
Q 023030 153 DKTVQRAIGVQEGTVKYW 170 (288)
Q Consensus 153 ~~~V~~aL~v~~~~~~~w 170 (288)
+.+.|+|||+.+.....|
T Consensus 6 S~~LR~ALg~~~~~~PPw 23 (48)
T PF04046_consen 6 SDELREALGMQENDPPPW 23 (48)
T ss_pred CHHHHHHcCCCCCCCChH
Confidence 467999999987654455
No 98
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=25.81 E-value=54 Score=30.64 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=27.6
Q ss_pred EEEEcCCCccCCCCCcHHHHHHHHHHhcCCCC
Q 023030 257 FATVKGAGHTAPEYKPKECLGMIDRWFACHPL 288 (288)
Q Consensus 257 f~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~~ 288 (288)
.+.|.|-||+ |.+|=++-.++.++.-.|-|+
T Consensus 258 QvMVEGPGHv-Pl~~I~~nv~lqK~lc~~APf 288 (423)
T TIGR00190 258 QCMVEGPGHV-PLDQIEANVRLQKELCDEAPF 288 (423)
T ss_pred eEEEECCCCC-cHHHHHHHHHHHHHhhCCCCe
Confidence 4899999997 999999999999998887775
No 99
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=24.84 E-value=1.1e+02 Score=27.58 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=30.6
Q ss_pred eEEEEEcCCCccCCCCCcHHHHHHHHHHhcCCC
Q 023030 255 LTFATVKGAGHTAPEYKPKECLGMIDRWFACHP 287 (288)
Q Consensus 255 ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~~~~ 287 (288)
-|++.|-++|-++-.+||.+..+-|+-|+.|..
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 889999999999998999999999999998864
No 100
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=24.61 E-value=2e+02 Score=29.63 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=25.4
Q ss_pred cCceEEEEccCCccccccHHHHHHHHHcC
Q 023030 196 KGYQVLIYSGDVDMKVPYVATEAWIKSLN 224 (288)
Q Consensus 196 ~~~rvliy~Gd~D~~~~~~g~~~~i~~l~ 224 (288)
-+++||+.+|..|..++..++.++.+.|.
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 46999999999999999998888887774
No 101
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=24.52 E-value=1e+02 Score=26.35 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=35.6
Q ss_pred ccchHHHHHHHHhcCceEEEEccCCccccccHHHHHHHHHcCCCC
Q 023030 183 VSSSLAYHRNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLNLTI 227 (288)
Q Consensus 183 ~~~~~~~~~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~w~~ 227 (288)
+..++.++..+.+.|+.|++.+|-.+. .-..|++++++.+.+.
T Consensus 117 ip~a~~l~~~~~~~G~~V~~iT~R~~~--~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 117 IPGALELYNYARSRGVKVFFITGRPES--QREATEKNLKKAGFPG 159 (229)
T ss_dssp ETTHHHHHHHHHHTTEEEEEEEEEETT--CHHHHHHHHHHHTTST
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCCch--hHHHHHHHHHHcCCCc
Confidence 356788999999999999999998877 5567889999887543
No 102
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.24 E-value=1.5e+02 Score=29.59 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=30.2
Q ss_pred HHHHhcCceEEEEccCCccccccHHHHHHHHHcC
Q 023030 191 RNLIKKGYQVLIYSGDVDMKVPYVATEAWIKSLN 224 (288)
Q Consensus 191 ~~Ll~~~~rvliy~Gd~D~~~~~~g~~~~i~~l~ 224 (288)
+.||+.+..||+..|..|..|+-..-|..-.+|.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq 331 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ 331 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh
Confidence 5688889999999999999999998888887774
No 103
>PRK10115 protease 2; Provisional
Probab=23.70 E-value=1.4e+02 Score=30.11 Aligned_cols=28 Identities=29% Similarity=0.612 Sum_probs=25.1
Q ss_pred Cce-EEEEccCCccccccHHHHHHHHHcC
Q 023030 197 GYQ-VLIYSGDVDMKVPYVATEAWIKSLN 224 (288)
Q Consensus 197 ~~r-vliy~Gd~D~~~~~~g~~~~i~~l~ 224 (288)
.++ +||.+|..|..|+..-.+.|+.+|.
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 467 7788999999999999999999984
No 104
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=21.69 E-value=1.2e+02 Score=27.22 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=30.9
Q ss_pred eeeEEEEEeecCCceeEEEEEcCCCccCCCCCcHHHHHHHHHHhc
Q 023030 240 VAGYWYRYKEKNNYHLTFATVKGAGHTAPEYKPKECLGMIDRWFA 284 (288)
Q Consensus 240 ~~G~~~~~~~~~~~~ltf~~V~~AGH~vP~dqP~~~~~m~~~fi~ 284 (288)
..|..+ + . +.+.+....||.|..|.|...-..+-.|..
T Consensus 288 tiGQMQ--G---k--~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~ 325 (343)
T KOG2564|consen 288 TIGQMQ--G---K--FQLQVLPLCGHFVHEDSPHKVAECLCVFWI 325 (343)
T ss_pred eeeeec--c---c--eeeeeecccCceeccCCcchHHHHHHHHHh
Confidence 455555 3 5 999999999999999999988888777754
No 105
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=20.93 E-value=81 Score=17.75 Aligned_cols=18 Identities=39% Similarity=0.344 Sum_probs=14.2
Q ss_pred hhhcccccCHHHHHHHhc
Q 023030 42 FAYLNALISHEIYESAKR 59 (288)
Q Consensus 42 ~~~~~gli~~~~~~~~~~ 59 (288)
-+|..|+|+++.|+...+
T Consensus 10 ~l~~~G~IseeEy~~~k~ 27 (31)
T PF09851_consen 10 ELYDKGEISEEEYEQKKA 27 (31)
T ss_pred HHHHcCCCCHHHHHHHHH
Confidence 357889999999987653
No 106
>smart00250 PLEC Plectin repeat.
Probab=20.52 E-value=33 Score=20.27 Aligned_cols=26 Identities=23% Similarity=0.174 Sum_probs=15.2
Q ss_pred CCCCCcccccCcccchhhcccccCHH
Q 023030 27 NPLTDSTENQNSVPHFAYLNALISHE 52 (288)
Q Consensus 27 Ng~~dp~~q~~s~~~~~~~~gli~~~ 52 (288)
-|.+||.....--..=|+..|||+.+
T Consensus 11 ~Giidp~t~~~lsv~eA~~~glid~~ 36 (38)
T smart00250 11 GGIIDPETGQKLSVEEALRRGLIDPE 36 (38)
T ss_pred eEEEcCCCCCCcCHHHHHHcCCCCcc
Confidence 35667765444334446777777754
Done!