BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023032
(288 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449450794|ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
gi|449496602|ref|XP_004160176.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/266 (72%), Positives = 226/266 (84%), Gaps = 6/266 (2%)
Query: 1 MAASFS--SLSFFSSTIFLTSSSNKVPKPIQLAKPNSLINLPPKPLIVSSQLASPLPILS 58
MA S S SLSFF+S++FL+S S++ +KPNSL K L +SS+LA+ LP+LS
Sbjct: 1 MATSISPSSLSFFTSSVFLSSPSHQNLNLFFNSKPNSL-KPQTKTLSISSELAT-LPVLS 58
Query: 59 FTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQK 118
FTG+K+GETYLDLKSA P+TARAVVHRA+ITD QNKRRGTASTLTR EV GGG+KPY QK
Sbjct: 59 FTGQKVGETYLDLKSAPPETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYKQK 118
Query: 119 KTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEE 178
KTGRARRGS RTPLRPGGGVVFGPKPRDWSIKIN+KEK+LAISTA+ASAA NTIVVEE
Sbjct: 119 KTGRARRGSMRTPLRPGGGVVFGPKPRDWSIKINRKEKKLAISTAVASAAV--NTIVVEE 176
Query: 179 FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLF 238
F KFE+PKTKEFI A++RWG+DPK+K+ FL+ EVS+NV SSRNIGTLK+LTPRTLNLF
Sbjct: 177 FGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLF 236
Query: 239 DILDAETLVLTPSTVDFLNGRYGVEF 264
DILD++ LVLTP+ VD+LN RYG+ +
Sbjct: 237 DILDSDKLVLTPTAVDYLNERYGINY 262
>gi|255569265|ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4, putative [Ricinus communis]
Length = 283
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/239 (75%), Positives = 205/239 (85%), Gaps = 4/239 (1%)
Query: 25 PKPIQLAKPNSLINLPPKPLIVS-SQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVV 83
PK +KPNSL N P L +S S S LPILSFTGEKIGETYLDLK+A PDTARAVV
Sbjct: 25 PKFQSFSKPNSL-NPPNSSLSLSISCQVSTLPILSFTGEKIGETYLDLKTAPPDTARAVV 83
Query: 84 HRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPK 143
HRA+ITD QNKRRGTASTLTR EVRGGG+KPY QKKTGRARRGS+RTPLRPGGGV+FGPK
Sbjct: 84 HRAIITDQQNKRRGTASTLTRAEVRGGGKKPYQQKKTGRARRGSSRTPLRPGGGVIFGPK 143
Query: 144 PRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPK 203
PRDWSIKINKKEKRLAISTA+ S A E+ + VEEF KFE+PKTK+FIEAM+RWGLDPK
Sbjct: 144 PRDWSIKINKKEKRLAISTALCS--ATESMLCVEEFGDKFEKPKTKDFIEAMKRWGLDPK 201
Query: 204 QKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
+K FL+M+V+++V SSRNIGTL+MLTPRTLNLFDIL+++ LVLTP VD+LNGRYGV
Sbjct: 202 EKVMFLMMDVADSVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDAVDYLNGRYGV 260
>gi|224092093|ref|XP_002309469.1| predicted protein [Populus trichocarpa]
gi|222855445|gb|EEE92992.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/242 (74%), Positives = 209/242 (86%), Gaps = 4/242 (1%)
Query: 22 NKVPKPIQLAKPNSLINLPPKPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARA 81
NK+PK L+ +L K L +S Q+A+ LPILSFTGEKIGETYLDLKSA P+TARA
Sbjct: 21 NKIPKLTSLSTTKPQYSL--KSLSISCQVAT-LPILSFTGEKIGETYLDLKSAPPETARA 77
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VVHR +ITD QNKRRGTASTLTRGEVRGGGRKPY QKKTGRARRGS R+PLRPGGGV+FG
Sbjct: 78 VVHRGIITDQQNKRRGTASTLTRGEVRGGGRKPYPQKKTGRARRGSMRSPLRPGGGVIFG 137
Query: 142 PKPRDWSIKINKKEKRLAISTAI-ASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
PKPRDWSIKIN+KEKRLA+STA+ ++A+ +E+ I VEEF KFE+PKTKEFIEAM RWGL
Sbjct: 138 PKPRDWSIKINRKEKRLAMSTALSSAASESESVICVEEFGDKFEKPKTKEFIEAMNRWGL 197
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
DPK+K FL+M+VS+NV SSRNIGTL+MLTPRTLNLFDIL+++ LVLTP TVD+LNGRY
Sbjct: 198 DPKEKVMFLMMDVSDNVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDTVDYLNGRY 257
Query: 261 GV 262
GV
Sbjct: 258 GV 259
>gi|297843518|ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arabidopsis lyrata subsp.
lyrata]
gi|297335482|gb|EFH65899.1| hypothetical protein ARALYDRAFT_470751 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/223 (76%), Positives = 202/223 (90%), Gaps = 2/223 (0%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL V+SQLA+ LPI+SF GEK+GETYLDLK+A DTARAVVHRA++TD+QNKRRGTAST
Sbjct: 43 KPLSVASQLAT-LPIISFEGEKVGETYLDLKTAPEDTARAVVHRAIVTDLQNKRRGTAST 101
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGG KPY+QKKTG ARRGS RTPLRPGGGVVFGP+P+DWSIKIN+KEK+LAIS
Sbjct: 102 LTRGEVRGGGIKPYAQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAIS 161
Query: 162 TAIASAAAAE-NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA++SA +AE IVVEEF KFE+PKTK+F+ AM+RWGLDPK+KA FL+++V ENV KS
Sbjct: 162 TALSSAVSAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKS 221
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
SRNIGTL+MLTPRTLNLFDIL+++ LVLTP+ V+FLN RYGV+
Sbjct: 222 SRNIGTLRMLTPRTLNLFDILNSDKLVLTPAAVEFLNARYGVD 264
>gi|147856052|emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
Length = 306
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/242 (73%), Positives = 204/242 (84%), Gaps = 4/242 (1%)
Query: 25 PKPIQLAKPNSLINLPPKPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVH 84
P + KPNS + P KPL V S L + +PILSFTGEK+GET L+LKSA DTARAVVH
Sbjct: 26 PNFLSTFKPNSFLK-PLKPLSVRSDLVA-IPILSFTGEKVGETQLNLKSAPLDTARAVVH 83
Query: 85 RALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKP 144
R +ITD+QN+RRGTASTLTRGEVRGGG+KPY QKKTGRARRGS RTPLRPGGGVVFGPKP
Sbjct: 84 RGIITDLQNRRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKP 143
Query: 145 RDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQ 204
RDWSIKIN+KEKRLAISTA++SAA NTIVVE+F KF++PKTKEFI AM+RWG+DPK+
Sbjct: 144 RDWSIKINRKEKRLAISTAMSSAAV--NTIVVEDFSDKFDKPKTKEFISAMKRWGIDPKE 201
Query: 205 KATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVEF 264
K+ FL+ EVS+NV SSRNIGTLKMLTPRTLNLFDIL+++ LVLT TVD+LN Y VE
Sbjct: 202 KSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETVDYLNRMYAVEA 261
Query: 265 EG 266
G
Sbjct: 262 IG 263
>gi|30680078|ref|NP_849604.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|332189986|gb|AEE28107.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
Length = 280
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 202/223 (90%), Gaps = 2/223 (0%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL VSSQLA+ LPILSF GEK+GETYLDLK+A DTARAVVHRA++TD+ NKRRGTAST
Sbjct: 43 KPLSVSSQLAT-LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTAST 101
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGG KPYSQKKTG ARRGS RTPLRPGGGVVFGP+P+DWSIKIN+KEK+LAIS
Sbjct: 102 LTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAIS 161
Query: 162 TAIASAAAAE-NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA++SAA+AE IVVEEF KFE+PKTK+F+ AM+RWGLDPK+KA FL+++V ENV KS
Sbjct: 162 TALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKS 221
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
SRNIGTL+MLTPRTLNLFDIL+A+ LVLTP+ V+FLN RYGV+
Sbjct: 222 SRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYGVD 264
>gi|18390754|ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|21542429|sp|O50061.2|RK4_ARATH RecName: Full=50S ribosomal protein L4, chloroplastic; AltName:
Full=CL4; AltName: Full=R-protein L4; Flags: Precursor
gi|17380866|gb|AAL36245.1| unknown protein [Arabidopsis thaliana]
gi|21436209|gb|AAM51392.1| unknown protein [Arabidopsis thaliana]
gi|110741117|dbj|BAE98652.1| hypothetical protein [Arabidopsis thaliana]
gi|332189985|gb|AEE28106.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
Length = 282
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 202/223 (90%), Gaps = 2/223 (0%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL VSSQLA+ LPILSF GEK+GETYLDLK+A DTARAVVHRA++TD+ NKRRGTAST
Sbjct: 43 KPLSVSSQLAT-LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTAST 101
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGG KPYSQKKTG ARRGS RTPLRPGGGVVFGP+P+DWSIKIN+KEK+LAIS
Sbjct: 102 LTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAIS 161
Query: 162 TAIASAAAAE-NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA++SAA+AE IVVEEF KFE+PKTK+F+ AM+RWGLDPK+KA FL+++V ENV KS
Sbjct: 162 TALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKS 221
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
SRNIGTL+MLTPRTLNLFDIL+A+ LVLTP+ V+FLN RYGV+
Sbjct: 222 SRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYGVD 264
>gi|79317138|ref|NP_001030985.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|79317147|ref|NP_001030986.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|8778555|gb|AAF79563.1|AC022464_21 F22G5.34 [Arabidopsis thaliana]
gi|222423413|dbj|BAH19678.1| AT1G07320 [Arabidopsis thaliana]
gi|332189987|gb|AEE28108.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|332189988|gb|AEE28109.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
Length = 278
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 202/223 (90%), Gaps = 2/223 (0%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL VSSQLA+ LPILSF GEK+GETYLDLK+A DTARAVVHRA++TD+ NKRRGTAST
Sbjct: 43 KPLSVSSQLAT-LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTAST 101
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGG KPYSQKKTG ARRGS RTPLRPGGGVVFGP+P+DWSIKIN+KEK+LAIS
Sbjct: 102 LTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAIS 161
Query: 162 TAIASAAAAE-NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA++SAA+AE IVVEEF KFE+PKTK+F+ AM+RWGLDPK+KA FL+++V ENV KS
Sbjct: 162 TALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKS 221
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
SRNIGTL+MLTPRTLNLFDIL+A+ LVLTP+ V+FLN RYGV+
Sbjct: 222 SRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYGVD 264
>gi|2791998|emb|CAA74895.1| ribosomal protein L4 [Arabidopsis thaliana]
gi|2792000|emb|CAA74894.1| ribosomal protein L4 [Arabidopsis thaliana]
Length = 282
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/223 (78%), Positives = 201/223 (90%), Gaps = 2/223 (0%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL VSSQLA+ LPILSF GEK+GETYLDLK+A DTARAVVHRA++TD+ NKRRGTAST
Sbjct: 43 KPLSVSSQLAT-LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTAST 101
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGG KPYSQKKTG ARRGS RTPLRPGGGVVFGP+P+DWSIKIN+KEK+LAIS
Sbjct: 102 LTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAIS 161
Query: 162 TAIASAAAAE-NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA++SAA+AE IVVEEF KFE+PKTK+ + AM+RWGLDPK+KA FL+++V ENV KS
Sbjct: 162 TALSSAASAEGGAIVVEEFGEKFEKPKTKDLLAAMQRWGLDPKEKAMFLMIDVDENVAKS 221
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
SRNIGTL+MLTPRTLNLFDIL+A+ LVLTP+ V+FLN RYGV+
Sbjct: 222 SRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYGVD 264
>gi|21537296|gb|AAM61637.1| ribosomal protein L4 [Arabidopsis thaliana]
Length = 282
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/223 (78%), Positives = 201/223 (90%), Gaps = 2/223 (0%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL VSSQLA+ LPILSF GEK+GETYLDLK+A DTARAVVHRA++TD+ NKRRGTAST
Sbjct: 43 KPLSVSSQLAT-LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTAST 101
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGG KPYSQKKTG ARRGS RTPLRPGGGVVFGP+P+DWSIKIN+KEK+LAIS
Sbjct: 102 LTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAIS 161
Query: 162 TAIASAAAAE-NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA++SAA+AE IVVEEF KFE+PKTK+F+ AM+RWGLDPK+K FL+++V ENV KS
Sbjct: 162 TALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKPMFLMIDVDENVAKS 221
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
SRNIGTL+MLTPRTLNLFDIL+A+ LVLTP+ V+FLN RYGV+
Sbjct: 222 SRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYGVD 264
>gi|356504563|ref|XP_003521065.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 2
[Glycine max]
Length = 301
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 204/237 (86%), Gaps = 4/237 (1%)
Query: 32 KPNSLINLPPK-PLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITD 90
K NS LP K PL +S + + PLP+L+F+GE++GE++LDL+SA PDTARAVVHRA++TD
Sbjct: 39 KSNSFPVLPSKKPLSISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTD 98
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+QNKRRGTASTLTRGEVRGGGRKP+ QKKTGRARRGSNRTPLRPGGGV+FGPKPRDWSIK
Sbjct: 99 LQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSIK 158
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKF-ERPKTKEFIEAMRRWGLDPKQKATFL 209
IN+KEKRLAISTA+ASAAA+ VE+F +F E+PKTKEFI AM+RWGLDPK+KA FL
Sbjct: 159 INRKEKRLAISTAVASAAASAVV--VEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMFL 216
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVEFEG 266
+ EV ENV SSRNIGTLKM TPRTLNL+DILDA+ LVLT VD+LN RYG +++G
Sbjct: 217 MTEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYQG 273
>gi|356504561|ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
[Glycine max]
Length = 310
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 204/237 (86%), Gaps = 4/237 (1%)
Query: 32 KPNSLINLPPK-PLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITD 90
K NS LP K PL +S + + PLP+L+F+GE++GE++LDL+SA PDTARAVVHRA++TD
Sbjct: 39 KSNSFPVLPSKKPLSISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTD 98
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+QNKRRGTASTLTRGEVRGGGRKP+ QKKTGRARRGSNRTPLRPGGGV+FGPKPRDWSIK
Sbjct: 99 LQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSIK 158
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKF-ERPKTKEFIEAMRRWGLDPKQKATFL 209
IN+KEKRLAISTA+ASAAA+ VE+F +F E+PKTKEFI AM+RWGLDPK+KA FL
Sbjct: 159 INRKEKRLAISTAVASAAASAVV--VEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMFL 216
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVEFEG 266
+ EV ENV SSRNIGTLKM TPRTLNL+DILDA+ LVLT VD+LN RYG +++G
Sbjct: 217 MTEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDYQG 273
>gi|242041475|ref|XP_002468132.1| hypothetical protein SORBIDRAFT_01g040120 [Sorghum bicolor]
gi|241921986|gb|EER95130.1| hypothetical protein SORBIDRAFT_01g040120 [Sorghum bicolor]
Length = 297
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 160/212 (75%), Positives = 179/212 (84%), Gaps = 1/212 (0%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QN RRGTASTLTRGEVRGG
Sbjct: 53 AATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRGEVRGG 112
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
G+KPY QKKTG+ARRGS RTPLRPGGGVVFGPKPRDWSIKIN+KEKRLAISTA+ASAA A
Sbjct: 113 GKKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTALASAAVA 172
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
E+ VVEEFD F PKT++F+ A++RWGLDPKQKA F E +NV S RNIG+LKM
Sbjct: 173 EDAFVVEEFDEAFASGPKTRDFVAALQRWGLDPKQKAMFFATEFDDNVRLSGRNIGSLKM 232
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LTPRTLNL+DILDA L TP+ VD+LN RYG
Sbjct: 233 LTPRTLNLYDILDARKLFFTPAAVDYLNSRYG 264
>gi|6919958|sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, chloroplastic; AltName:
Full=CL4; AltName: Full=R-protein L4; Flags: Precursor
gi|3298439|dbj|BAA31510.1| chloroplast ribosomal protein L4 [Nicotiana tabacum]
Length = 282
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 191/216 (88%), Gaps = 3/216 (1%)
Query: 46 VSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRG 105
+ S++A+ +PILSF G ++G T L+LKSA DTARAVVHR L TD++N+RRGTASTLTR
Sbjct: 41 IRSEVAT-IPILSFDGAEVGSTTLNLKSAPLDTARAVVHRGLTTDLRNQRRGTASTLTRS 99
Query: 106 EVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIA 165
EVRGGG KPY QKKTGRARRGSNRTPLRPGGGVVFGPKP+DWS+KINKKEKRLAISTA++
Sbjct: 100 EVRGGGIKPYPQKKTGRARRGSNRTPLRPGGGVVFGPKPKDWSVKINKKEKRLAISTALS 159
Query: 166 SAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIG 225
S A+ENTIVVEEF+ KFE+PKTKEFI+ MRRWGLDPK+K+ FL+ +VS+NV SSRNIG
Sbjct: 160 S--ASENTIVVEEFNDKFEKPKTKEFIDLMRRWGLDPKEKSLFLMTDVSDNVILSSRNIG 217
Query: 226 TLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
TLKMLTPRTLNLFDILD+E LVLT S VDFLN RYG
Sbjct: 218 TLKMLTPRTLNLFDILDSEKLVLTKSAVDFLNERYG 253
>gi|29893583|gb|AAP06837.1| unknown protein [Oryza sativa Japonica Group]
Length = 426
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/222 (71%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QNKRRGTASTLTRGEVRGG
Sbjct: 64 AATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEVRGG 123
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWSIKIN+KEKRLAISTA+ASAA A
Sbjct: 124 GRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASAAVA 183
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEFD +F PKT++F+ A++RWGLDPK+KA F + ++NV S RNIG+LKM
Sbjct: 184 DDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGSLKM 243
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV----EFEGD 267
LTPRTLNL+DILDA L TP+ +++LN RYG E+E D
Sbjct: 244 LTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDD 285
>gi|357112981|ref|XP_003558283.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like
[Brachypodium distachyon]
Length = 313
Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 160/228 (70%), Positives = 188/228 (82%), Gaps = 5/228 (2%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP++SFTGEK+GE LDLKSA P TARAVVHRALITD QN RRGTASTLTRGEVRGG
Sbjct: 60 ATTLPVISFTGEKVGEVALDLKSAPPSTARAVVHRALITDRQNARRGTASTLTRGEVRGG 119
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWSIKIN+KEKRLAISTA+ASAA A
Sbjct: 120 GRKPYGQKKTGKARRGSTRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASAAVA 179
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VV+EFD +F P+T++F+ A++RWGLDPK+KA F E+ +NV S RNIGTLKM
Sbjct: 180 NDSFVVQEFDEEFATGPRTRDFVAALQRWGLDPKEKAMFFSTELDDNVRLSGRNIGTLKM 239
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV----EFEGDGDEEEE 273
LTPRTLNL+DILDA TP+ +D+LN RYG E+E D D E++
Sbjct: 240 LTPRTLNLYDILDARKHFFTPAAIDYLNTRYGTTVFDEYEDDTDAEDD 287
>gi|115452095|ref|NP_001049648.1| Os03g0265400 [Oryza sativa Japonica Group]
gi|108707338|gb|ABF95133.1| 50S ribosomal protein L4, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113548119|dbj|BAF11562.1| Os03g0265400 [Oryza sativa Japonica Group]
gi|215678998|dbj|BAG96428.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692528|dbj|BAG87948.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737540|dbj|BAG96670.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 159/222 (71%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QNKRRGTASTLTRGEVRGG
Sbjct: 64 AATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEVRGG 123
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWSIKIN+KEKRLAISTA+ASAA A
Sbjct: 124 GRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASAAVA 183
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEFD +F PKT++F+ A++RWGLDPK+KA F + ++NV S RNIG+LKM
Sbjct: 184 DDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGSLKM 243
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV----EFEGD 267
LTPRTLNL+DILDA L TP+ +++LN RYG E+E D
Sbjct: 244 LTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDD 285
>gi|218192491|gb|EEC74918.1| hypothetical protein OsI_10864 [Oryza sativa Indica Group]
Length = 324
Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 159/222 (71%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QNKRRGTASTLTRGEVRGG
Sbjct: 65 AATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEVRGG 124
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWSIKIN+KEKRLAISTA+ASAA A
Sbjct: 125 GRKPYQQKKTGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASAAVA 184
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEFD +F PKT++F+ A++RWGLDPK+KA F + ++NV S RNIG+LKM
Sbjct: 185 DDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGSLKM 244
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV----EFEGD 267
LTPRTLNL+DILDA L TP+ +++LN RYG E+E D
Sbjct: 245 LTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDD 286
>gi|356520770|ref|XP_003529033.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
[Glycine max]
gi|356520772|ref|XP_003529034.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 2
[Glycine max]
Length = 303
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/224 (75%), Positives = 197/224 (87%), Gaps = 3/224 (1%)
Query: 42 KPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAST 101
KPL +S + + PLP+L+F+GE++GE++LDL+SA PDTARAVVHRA++TD+QNKRRGTAST
Sbjct: 45 KPLSISCKASPPLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVTDLQNKRRGTAST 104
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTRGEVRGGGRKP+ QKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKIN+KEKRLAIS
Sbjct: 105 LTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAIS 164
Query: 162 TAIASAAAAENTIVVEEFDGKF-ERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
TA+ASAAA+ VE+F +F E+PKTKEFI AM+RWGLDPK+KA FL+ EV ENV S
Sbjct: 165 TAVASAAASAVV--VEDFATEFAEKPKTKEFIAAMKRWGLDPKEKAMFLMTEVPENVRLS 222
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVEF 264
SRNIGTLKM TPRTLNL+DILDA+ LVLT VD+LN RYG ++
Sbjct: 223 SRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYGGDY 266
>gi|395146506|gb|AFN53661.1| 50S ribosomal protein [Linum usitatissimum]
Length = 294
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/215 (73%), Positives = 190/215 (88%), Gaps = 3/215 (1%)
Query: 46 VSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRG 105
+S ++A+ LPI +FTGEK+GET LD+KSA P+TA+AVVHR +ITD+QNKRRGTASTLTR
Sbjct: 47 ISCEVAT-LPIFNFTGEKVGETVLDIKSAPPETAKAVVHRGIITDLQNKRRGTASTLTRS 105
Query: 106 EVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIA 165
EVRGGG+KPY QK TGRARRGS RTPLRPGGGV+FGP+P+DWSIKIN+KEK+LA+STA+A
Sbjct: 106 EVRGGGKKPYPQKSTGRARRGSMRTPLRPGGGVIFGPRPKDWSIKINRKEKQLAMSTALA 165
Query: 166 SAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIG 225
S AAE+ I VEEF +FE+P+TK+FI AM RWGLDPK+K FL+M+V++NV S RNIG
Sbjct: 166 S--AAESMICVEEFGEEFEKPRTKDFIAAMARWGLDPKEKVMFLMMDVNDNVGLSGRNIG 223
Query: 226 TLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
TLKMLTPRTLNLFDIL+++ LVLTP TVDFLNGRY
Sbjct: 224 TLKMLTPRTLNLFDILNSDKLVLTPDTVDFLNGRY 258
>gi|222624621|gb|EEE58753.1| hypothetical protein OsJ_10246 [Oryza sativa Japonica Group]
Length = 323
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/222 (71%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QNKRRGTASTLTRGEVRGG
Sbjct: 64 AATLPVLSFTGEKVGEVALDLKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEVRGG 123
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTP+RPGGGV+FGPKPRDWSIKIN+KEKRLAISTA+ASAA A
Sbjct: 124 GRKPYQQKKTGKARRGSMRTPVRPGGGVIFGPKPRDWSIKINRKEKRLAISTALASAAVA 183
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEFD +F PKT++F+ A++RWGLDPK+KA F + ++NV S RNIG+LKM
Sbjct: 184 DDAFVVEEFDEEFAAGPKTRDFVAALQRWGLDPKEKAMFFATDFADNVRLSGRNIGSLKM 243
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV----EFEGD 267
LTPRTLNL+DILDA L TP+ +++LN RYG E+E D
Sbjct: 244 LTPRTLNLYDILDARKLFFTPAAINYLNSRYGATVFDEYEDD 285
>gi|226501908|ref|NP_001149608.1| 50S ribosomal protein L4 [Zea mays]
gi|195628460|gb|ACG36060.1| 50S ribosomal protein L4 [Zea mays]
Length = 314
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 157/212 (74%), Positives = 177/212 (83%), Gaps = 3/212 (1%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QN RRGTASTLTRGEVRGG
Sbjct: 59 AATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRGEVRGG 118
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGVVFGPKPRDWSIKIN+KEKRLAISTAI S AA
Sbjct: 119 GRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAIVS--AA 176
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEF+ F PKT++F+ A++RWGLDPKQKA F + +NV S RNIG+LKM
Sbjct: 177 KDAFVVEEFEEAFASGPKTRDFVAALQRWGLDPKQKAMFFATDFDDNVRLSGRNIGSLKM 236
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LTPRTLNL+DILDA L TP+ VD+LN RYG
Sbjct: 237 LTPRTLNLYDILDARKLFFTPAAVDYLNSRYG 268
>gi|194707774|gb|ACF87971.1| unknown [Zea mays]
Length = 314
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/212 (74%), Positives = 177/212 (83%), Gaps = 3/212 (1%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QN RRGTASTLTRGEVRGG
Sbjct: 59 AATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRGEVRGG 118
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGVVFGPKPRDWSIKIN+KEKRLAISTAI S AA
Sbjct: 119 GRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAIVS--AA 176
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEF+ F PKT++F+ A++RWGLDPKQKA F + +NV S RNIG+LKM
Sbjct: 177 KDAFVVEEFEEAFASGPKTRDFVAALQRWGLDPKQKAMFFATDFDDNVRLSGRNIGSLKM 236
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LTPRTLNL+DILDA L TP+ VD+LN RYG
Sbjct: 237 LTPRTLNLYDILDARKLFFTPAAVDYLNSRYG 268
>gi|414865985|tpg|DAA44542.1| TPA: 50S ribosomal protein L4 [Zea mays]
Length = 314
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/212 (74%), Positives = 177/212 (83%), Gaps = 3/212 (1%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+LSFTGEK+GE LDLKSA P TARAVVHRA+ITD QN RRGTASTLTRGEVRGG
Sbjct: 59 AATLPVLSFTGEKVGEVTLDLKSAPPSTARAVVHRAIITDRQNARRGTASTLTRGEVRGG 118
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGVVFGPKPRDWSIKIN+KEKRLAISTAI S AA
Sbjct: 119 GRKPYQQKKTGKARRGSQRTPLRPGGGVVFGPKPRDWSIKINRKEKRLAISTAIVS--AA 176
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VVEEF+ F PKT++F+ A++RWGLDPKQKA F + +NV S RNIG+LKM
Sbjct: 177 KDAFVVEEFEEAFASGPKTRDFVAALQRWGLDPKQKAMFFATDFDDNVRLSGRNIGSLKM 236
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LTPRTLNL+DILDA L TP+ VD+LN RYG
Sbjct: 237 LTPRTLNLYDILDARKLFFTPAAVDYLNSRYG 268
>gi|2792020|emb|CAA63651.1| ribosomal protein L4 [Spinacia oleracea]
Length = 293
Score = 322 bits (826), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 182/211 (86%), Gaps = 2/211 (0%)
Query: 53 PLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
PLPIL+F+GEK+GET+L+LK+A P+ ARAVVHR LIT +QNKRRGTASTLTR EVRGGGR
Sbjct: 54 PLPILNFSGEKVGETFLNLKTAPPEKARAVVHRGLITHLQNKRRGTASTLTRAEVRGGGR 113
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KPY QKKTGRARRGS +PLRPGGGV+FGPKPRDW+IK+NKKE+RLA+STAIASA N
Sbjct: 114 KPYPQKKTGRARRGSQGSPLRPGGGVIFGPKPRDWTIKMNKKERRLALSTAIASAVG--N 171
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+ VVEEF FE+PKTK+FI AM+RWGLDP +K+ F +M++ ENVEKS RNI TLK+LTP
Sbjct: 172 SFVVEEFAENFEKPKTKDFIAAMQRWGLDPAEKSLFFLMDLVENVEKSGRNIRTLKLLTP 231
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
R+LNLFD+L+AE LV T T+ +LN RYGV+
Sbjct: 232 RSLNLFDVLNAEKLVFTEGTIQYLNQRYGVD 262
>gi|3914665|sp|O49937.1|RK4_SPIOL RecName: Full=50S ribosomal protein L4, chloroplastic;
Short=R-protein L4; Flags: Precursor
gi|189096129|pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|2792007|emb|CAA75149.1| chloroplast ribosomal protein L4 [Spinacia oleracea]
Length = 293
Score = 322 bits (826), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 182/211 (86%), Gaps = 2/211 (0%)
Query: 53 PLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
PLPIL+F+GEK+GET+L+LK+A P+ ARAVVHR LIT +QNKRRGTASTLTR EVRGGGR
Sbjct: 54 PLPILNFSGEKVGETFLNLKTAPPEKARAVVHRGLITHLQNKRRGTASTLTRAEVRGGGR 113
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KPY QKKTGRARRGS +PLRPGGGV+FGPKPRDW+IK+NKKE+RLA+STAIASA N
Sbjct: 114 KPYPQKKTGRARRGSQGSPLRPGGGVIFGPKPRDWTIKMNKKERRLALSTAIASAVG--N 171
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+ VVEEF FE+PKTK+FI AM+RWGLDP +K+ F +M++ ENVEKS RNI TLK+LTP
Sbjct: 172 SFVVEEFAENFEKPKTKDFIAAMQRWGLDPAEKSLFFLMDLVENVEKSGRNIRTLKLLTP 231
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
R+LNLFD+L+AE LV T T+ +LN RYGV+
Sbjct: 232 RSLNLFDVLNAEKLVFTEGTIQYLNQRYGVD 262
>gi|326499386|dbj|BAJ86004.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/212 (70%), Positives = 180/212 (84%), Gaps = 1/212 (0%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ LP+++FTGEK+GE LD+K+A P TARAVVHRALITD QN RRGTASTLTRGEVRGG
Sbjct: 61 ATTLPVINFTGEKVGEVALDIKAAPPSTARAVVHRALITDRQNARRGTASTLTRGEVRGG 120
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QKKTG+ARRGS RTPLRPGGGV+FGPKPRDW+IKIN+KEKRLAISTA+ASAA A
Sbjct: 121 GRKPYGQKKTGKARRGSVRTPLRPGGGVIFGPKPRDWTIKINRKEKRLAISTALASAAVA 180
Query: 171 ENTIVVEEFDGKFER-PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
++ VV+EFD +F P+T++F+ A++RWGLDP++KA F E+ +NV S RNIGTLKM
Sbjct: 181 NDSFVVQEFDEEFATGPRTRDFVAALQRWGLDPREKAMFFSTELDDNVRPSGRNIGTLKM 240
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LTPRTLNL+DILDA TP+ +++LN RYG
Sbjct: 241 LTPRTLNLYDILDARKHFFTPAAIEYLNSRYG 272
>gi|116786479|gb|ABK24122.1| unknown [Picea sitchensis]
Length = 312
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/224 (67%), Positives = 181/224 (80%), Gaps = 3/224 (1%)
Query: 39 LPPKPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGT 98
L + L V +Q A LP+L+F GE+ GE LDLK A PDTARAVVHR +IT++QN+RRGT
Sbjct: 43 LHSRTLSVRAQ-AVTLPVLTFDGERAGEASLDLKCARPDTARAVVHRGVITELQNRRRGT 101
Query: 99 ASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRL 158
ASTLTR EVRGGGRKPY QK TGRARRGS RTPLRPGGGV+FGPKP+DWSIK+NKKEKRL
Sbjct: 102 ASTLTRAEVRGGGRKPYRQKGTGRARRGSQRTPLRPGGGVIFGPKPKDWSIKMNKKEKRL 161
Query: 159 AISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVE 218
AISTA+ SA + T+VVE+F+ KFERPKTKEFIEA++RWG++P + EVSENV
Sbjct: 162 AISTALMSATVS--TVVVEDFNDKFERPKTKEFIEALKRWGVEPSEHTLIFSTEVSENVR 219
Query: 219 KSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
SSRNIGTLK+LTPR LNL+D+L A+ LV T +V++LN YG+
Sbjct: 220 LSSRNIGTLKVLTPRNLNLYDVLRADKLVFTEGSVEYLNRMYGL 263
>gi|168037394|ref|XP_001771189.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677569|gb|EDQ64038.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 235
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/229 (61%), Positives = 179/229 (78%), Gaps = 7/229 (3%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+A LP+L+F GE GE +DL++A P+TA+AVVHR +I +MQN+RRGTASTLTR EVRG
Sbjct: 9 MAVTLPMLTFEGEAAGEVEMDLRTARPETAKAVVHRGVICEMQNRRRGTASTLTRSEVRG 68
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKPY QK TGRAR+GS RTPLRPGGGVVFGPKP+DWSIKINKKEKRLAISTA+ SA+
Sbjct: 69 GGRKPYKQKGTGRARQGSIRTPLRPGGGVVFGPKPKDWSIKINKKEKRLAISTALQSASV 128
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
NT+VVE+F+ KF PKTKEFI A++RWG+ + + + SE++ SSRN+ T+K+
Sbjct: 129 --NTVVVEDFEDKFTTPKTKEFISALKRWGVKQGENSLLFSVNPSESLVLSSRNVSTVKL 186
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV--EFE---GDGDEEEE 273
+TPR LNL+D+L A+ L+LT S+V++L YG FE GDG+ EEE
Sbjct: 187 ITPRNLNLYDVLRADKLILTKSSVEYLEQMYGASGSFEIIVGDGEGEEE 235
>gi|168004892|ref|XP_001755145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693738|gb|EDQ80089.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 175/235 (74%), Gaps = 13/235 (5%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+A LP+L+ G GE +DL++A P+TA++VVHR LI +MQN+RRGTASTLTR EVRG
Sbjct: 1 MAVTLPVLTLEGGAAGEVEMDLRTARPETAKSVVHRGLICEMQNRRRGTASTLTRSEVRG 60
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKPY QK TGRAR+GS RTPLRPGGGVVFGPKP+DWSIKINKKEK+LAISTA+ SA+A
Sbjct: 61 GGRKPYKQKGTGRARQGSIRTPLRPGGGVVFGPKPKDWSIKINKKEKQLAISTALQSASA 120
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
NT+VVE+F+ KF PKTKEFI A+ RWG+ P + + M S+++ SSRN+ T K+
Sbjct: 121 --NTVVVEDFEEKFTAPKTKEFIAALMRWGVKPGENSLLFSMNPSDSLVLSSRNVSTCKL 178
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE-----------FEGDGDEEEE 273
+TPR+LNL+D+L A+ L+LT S V++L +YG EGD ++E
Sbjct: 179 MTPRSLNLYDVLRADKLILTKSAVEYLEQQYGASESFEIVTSYEIVEGDAGRQDE 233
>gi|168046642|ref|XP_001775782.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672934|gb|EDQ59465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 174/229 (75%), Gaps = 7/229 (3%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+A LP L+F GE GE +DL++A P+TA+AVVHR +I +MQN+RRGTASTLTR EVRG
Sbjct: 4 MAVALPKLTFEGEAAGEVEMDLRTARPETAKAVVHRGVICEMQNRRRGTASTLTRSEVRG 63
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKPY QK TGRAR+GS RTPLRPGGGVVFGPKP+DWSIKINKKEKRLAISTA+ SA A
Sbjct: 64 GGRKPYKQKGTGRARQGSIRTPLRPGGGVVFGPKPKDWSIKINKKEKRLAISTALQSAGA 123
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
NT+VVE+F+ KF PKTK+F+ A++RWG+ + + M SE++ SSRN+ T K+
Sbjct: 124 --NTVVVEDFEEKFSTPKTKDFMSALKRWGVKQGENSLLFSMNPSESLVLSSRNVNTFKL 181
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE-----FEGDGDEEEE 273
++PR LNL+D+L A+ L+LT S+V +L +YG GD + EEE
Sbjct: 182 ISPRNLNLYDVLRADKLILTESSVKYLEQQYGTSGSHEIVAGDVEGEEE 230
>gi|302765881|ref|XP_002966361.1| hypothetical protein SELMODRAFT_67570 [Selaginella moellendorffii]
gi|302792867|ref|XP_002978199.1| hypothetical protein SELMODRAFT_57647 [Selaginella moellendorffii]
gi|300154220|gb|EFJ20856.1| hypothetical protein SELMODRAFT_57647 [Selaginella moellendorffii]
gi|300165781|gb|EFJ32388.1| hypothetical protein SELMODRAFT_67570 [Selaginella moellendorffii]
Length = 230
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+ LP+ SF GE G +LDLK A+ TAR +VHR +IT++QN+RRGTAST TR EVRGG
Sbjct: 4 GATLPLFSFDGECTGSVFLDLKVASAHTARGLVHRGVITELQNRRRGTASTKTRAEVRGG 63
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QK TGRARRGS RTPLRPGGG+VFGPKP+DW IKINKKEKRLAISTA+ SAA
Sbjct: 64 GRKPYKQKGTGRARRGSQRTPLRPGGGIVFGPKPKDWGIKINKKEKRLAISTALQSAAV- 122
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
++I VE+F+ KF PKTK F+ AM RWG+D + + V++ +EKSSRNI T+KML
Sbjct: 123 -DSIAVEDFEEKFTEPKTKFFLAAMERWGVDVSKHSLIFATNVNDFLEKSSRNIKTVKML 181
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
TPR+LNL+D+L A+ ++ T S +D+LN YGV+
Sbjct: 182 TPRSLNLYDVLRADKILFTSSGIDYLNQSYGVK 214
>gi|428220865|ref|YP_007105035.1| 50S ribosomal protein L4 [Synechococcus sp. PCC 7502]
gi|427994205|gb|AFY72900.1| 50S ribosomal protein L4, bacterial/organelle [Synechococcus sp.
PCC 7502]
Length = 222
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 155/220 (70%), Gaps = 2/220 (0%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G GE LDLK+A TA +VHRALI + N+R+GTAST TR EVRGGGRK
Sbjct: 2 ITVQDWDGNNTGEISLDLKTAKETTANGIVHRALIRQLNNQRQGTASTKTRAEVRGGGRK 61
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GSNR+PL GGGV+FGPKPRD+ IK+N+KE+RLAI+TA+A A+ +
Sbjct: 62 PWKQKGTGRARAGSNRSPLWRGGGVIFGPKPRDFDIKMNRKERRLAITTALAGRAS--DL 119
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV++F+G+ +PKTK+ + A+ RWG +P+++ + + EN+E S+RN+ L ++T
Sbjct: 120 VVVQDFNGQLPKPKTKDLVNALSRWGAEPRKRTLLITDQKHENIELSARNVRNLVLITAD 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYGVEFEGDGDEEEE 273
LN+FDI++A L++T + +D ++ Y + + +E E
Sbjct: 180 QLNIFDIVNAHKLIVTATALDKIHSIYSAKVTNNVQQEVE 219
>gi|427736146|ref|YP_007055690.1| 50S ribosomal protein L4 [Rivularia sp. PCC 7116]
gi|427371187|gb|AFY55143.1| LSU ribosomal protein L4P [Rivularia sp. PCC 7116]
Length = 210
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 149/208 (71%), Gaps = 2/208 (0%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ GE++G+ LDLK A ++A VVHRAL+ M N R+G AST TR EVRGGGRK
Sbjct: 4 CAVKNWQGEEVGQKTLDLKVAKEESASHVVHRALVRQMTNARQGNASTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGGV+FGPKP+D+++ +N+KE+RLA+ TA+ S +E+
Sbjct: 64 PWRQKGTGRARAGSTRSPLWRGGGVIFGPKPKDYNLNMNRKERRLALRTALGS--RSEDM 121
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVVEEF + +RPKTK+ +EA+ RWG P+QK ++ E SENV S+RNI ++++
Sbjct: 122 IVVEEFSEQLQRPKTKDLVEAISRWGSQPEQKTLLILSERSENVYLSARNIENVRLMVAD 181
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+FD+L A+ +V+T S +D + YG
Sbjct: 182 QLNVFDLLHADKIVVTASAIDKIQEVYG 209
>gi|440683407|ref|YP_007158202.1| LSU ribosomal protein L4P [Anabaena cylindrica PCC 7122]
gi|428680526|gb|AFZ59292.1| LSU ribosomal protein L4P [Anabaena cylindrica PCC 7122]
Length = 210
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 148/203 (72%), Gaps = 2/203 (0%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
++ GE++GET DL+ A +TA +VHRAL+ M N R+GTAST TR EVRGGGRKP+ Q
Sbjct: 8 NWQGEQVGETTFDLRVAKAETAAHIVHRALVRQMTNSRQGTASTKTRSEVRGGGRKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGGV+FGPKPRD+++K+N+KE+RLA+ TA S AE+ IVVE
Sbjct: 68 KGTGRARAGSIRSPLWRGGGVIFGPKPRDFNLKLNRKERRLALRTAFVS--RAEDLIVVE 125
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
EF + +RPKTKE + A+ RWG P+QK+ ++ E++ENV S+RNI LK++ LN+
Sbjct: 126 EFSNELQRPKTKELVAALARWGALPEQKSLLILSEIAENVLLSARNIENLKLIAADQLNV 185
Query: 238 FDILDAETLVLTPSTVDFLNGRY 260
+D+L A+ ++LT + + + Y
Sbjct: 186 YDLLHADKIILTSAALAKIQEVY 208
>gi|298491399|ref|YP_003721576.1| 50S ribosomal protein L4 ['Nostoc azollae' 0708]
gi|298233317|gb|ADI64453.1| ribosomal protein L4/L1e ['Nostoc azollae' 0708]
Length = 210
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 150/205 (73%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GET DL+ A +TA +VHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGETSFDLRVAKQETAAHIVHRALVRQMTNSRQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+++K+N+KE+RLA+ TA S AE+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFNLKLNRKERRLALRTAFVS--RAEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + +RPKTK+ + A+ RWG +QK+ ++ E++ENV S+RNI LK++ L
Sbjct: 124 VEEFSNELQRPKTKDLVAALARWGAAQEQKSLLILSEIAENVLLSARNIENLKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V+TP+ ++ + Y
Sbjct: 184 NVYDLLHADKIVVTPAALEKIQEVY 208
>gi|434405014|ref|YP_007147899.1| LSU ribosomal protein L4P [Cylindrospermum stagnale PCC 7417]
gi|428259269|gb|AFZ25219.1| LSU ribosomal protein L4P [Cylindrospermum stagnale PCC 7417]
Length = 210
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 149/205 (72%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE++GET +L+ A P+TA +VHRAL+ + N R+GTAST TR EVRGGGRKP+
Sbjct: 6 IKNWQGEQVGETTFELRVAKPETASHIVHRALVRQLNNARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA+ S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFDLKLNRKERRLALRTALVS--RIEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + +RPKTKE + A+ RWG P+ KA ++ E++EN+ S+RNI LK++ L
Sbjct: 124 VEEFSAELQRPKTKELVAALARWGAAPEIKALLILPEIAENIRLSARNIENLKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V+T S ++ + Y
Sbjct: 184 NVYDLLHADKVVVTASALEKIQEVY 208
>gi|414076544|ref|YP_006995862.1| 50S ribosomal protein L4 [Anabaena sp. 90]
gi|413969960|gb|AFW94049.1| 50S ribosomal protein L4 [Anabaena sp. 90]
Length = 210
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE++GET DL+ A TA +VHRAL+ M N R+GT ST TR EVRGGGRKP+
Sbjct: 6 IKNWQGEQVGETSFDLRVAKETTAAHIVHRALVRQMTNSRQGTVSTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA AE+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFDLKMNRKERRLALRTAF--VGRAEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + +RPKTK+ + A+ RWG +QK ++ E++ENV S+RNI LK++ L
Sbjct: 124 VEEFSNELQRPKTKDLVAALARWGATSEQKTLLILSEIAENVLLSARNIENLKLIPADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +++T ST+D + Y
Sbjct: 184 NVYDLLHADKIIVTSSTLDKIQEVY 208
>gi|427732014|ref|YP_007078251.1| 50S ribosomal protein L4 [Nostoc sp. PCC 7524]
gi|427367933|gb|AFY50654.1| 50S ribosomal protein L4, bacterial/organelle [Nostoc sp. PCC 7524]
Length = 210
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 147/205 (71%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ DL SA P+TA +VHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQKAFDLPSAKPETASHIVHRALVRQMTNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+++K+N+KE+RLA+ TA+ S ++ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFNLKMNRKERRLALRTALVS--RVDDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTKE + A RWG+ +QK+ ++ E+SEN+ S RN+ LK++ L
Sbjct: 124 VEEFSNELSRPKTKELLAAFTRWGVAAEQKSLLILSELSENIYLSGRNVENLKLMPADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +++T S +D + Y
Sbjct: 184 NVYDLLHADKIIVTTSALDKIQEVY 208
>gi|443329296|ref|ZP_21057883.1| 50S ribosomal protein L4, bacterial/organelle [Xenococcus sp. PCC
7305]
gi|442791038|gb|ELS00538.1| 50S ribosomal protein L4, bacterial/organelle [Xenococcus sp. PCC
7305]
Length = 210
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++ E L+LK A + A +VHRAL+ M R+GTAS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVSEASLELKVAKEENANHIVHRALVRQMAKARQGTASSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+NKKE+RLA+ TA +S EN +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYDLKMNKKERRLALRTAFSS--CLENAVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + RPKTKE I A+ RW +DP QK +V E++EN+ S+RNI +K+L L
Sbjct: 124 VENFAEEIARPKTKEIISALERWKVDPNQKVLLIVTEITENLNLSTRNIPNVKLLKASNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L+A+ +V+T + + YG
Sbjct: 184 NVYDLLNAQQVVVTTDALTKIQEVYG 209
>gi|254412295|ref|ZP_05026070.1| ribosomal protein L4/L1 family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181261|gb|EDX76250.1| ribosomal protein L4/L1 family [Coleofasciculus chthonoplastes PCC
7420]
Length = 205
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 148/196 (75%), Gaps = 2/196 (1%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
++ GE++G+ L+LK A D+A +VHRAL+ M N R+GTAST TR EVRGGGRKP+ Q
Sbjct: 3 NWQGEEVGQATLELKVAKEDSASHIVHRALVRQMTNARQGTASTKTRAEVRGGGRKPWRQ 62
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GSNR+PL GGG++FGPKPRD+++K+N+KE+RLA+ TA+ AE+ IVVE
Sbjct: 63 KGTGRARAGSNRSPLWRGGGIIFGPKPRDYNLKMNRKERRLALRTAL--QGRAEDMIVVE 120
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
EF + RPKTK+ ++A+ RWG+DPKQK ++ + ++ V S+RN+ ++K++ +LN+
Sbjct: 121 EFADQLPRPKTKDLMDAIARWGIDPKQKVLLILPQPAQQVYLSARNVPSIKLIYADSLNV 180
Query: 238 FDILDAETLVLTPSTV 253
+D+L+A+ +V T + +
Sbjct: 181 YDVLNADKIVTTNTAL 196
>gi|354565795|ref|ZP_08984969.1| ribosomal protein L4/L1e [Fischerella sp. JSC-11]
gi|353548668|gb|EHC18113.1| ribosomal protein L4/L1e [Fischerella sp. JSC-11]
Length = 210
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ DL+ A TA +V+RALI M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGQKSFDLRVAKEQTAAHIVYRALIRQMANARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ IK+N+KE++LA+ TA AS ++ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYEIKMNRKERKLALRTAFAS--RVDDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + +RPKTKE + A+ RWG DP+ K ++ E +ENV S+RN+ LK++ L
Sbjct: 124 VEEFSEQLQRPKTKELVSAIARWGADPESKTLLVLSEKNENVLLSARNVENLKLIAADNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V+T S ++ + Y
Sbjct: 184 NVYDLLHADKIVVTASALEKIQEVY 208
>gi|428301938|ref|YP_007140244.1| 50S ribosomal protein L4 [Calothrix sp. PCC 6303]
gi|428238482|gb|AFZ04272.1| LSU ribosomal protein L4P [Calothrix sp. PCC 6303]
Length = 210
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 147/206 (71%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ +LK A ++A +VHRAL+ M N R+G AST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGQKTFELKVAKEESASHIVHRALMRQMSNARQGNASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+SI++N+KE+RLA+ TA AS ++ I+
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFSIQMNRKERRLALRTAFAS--RIDDMII 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F + +RPKTKE + A+ RWG +P ++ + E ++N+ S+RNI +K+ + T+
Sbjct: 124 VEDFGSQLQRPKTKELVNAIARWGAEPDKRVLLIYCENNQNLYLSARNIANVKVFSANTI 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++DIL AE +++T S +D + +G
Sbjct: 184 NIYDILHAEKIIVTASAIDKIQEVFG 209
>gi|428224236|ref|YP_007108333.1| 50S ribosomal protein L4 [Geitlerinema sp. PCC 7407]
gi|427984137|gb|AFY65281.1| LSU ribosomal protein L4P [Geitlerinema sp. PCC 7407]
Length = 210
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+++G+ LDLK A +TA +VHRAL+ M N R+GTAST TR EV GGGRKP+
Sbjct: 6 VRDWQGQEVGQASLDLKVAKEETAAHIVHRALVRQMANARQGTASTKTRAEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TA S +E+ IV
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYSVKMNRKERRLALRTAFQS--RSEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF K +PKTKE + A+ RWG+ K +V E +E V S+RN+ LK+++ L
Sbjct: 124 VEEFADKLAQPKTKELMSAIARWGVGADSKVLLIVSERNETVYLSARNVANLKLISATNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A+ +V T + + + YG
Sbjct: 184 NVFDLLAADKIVTTTTALAKIQEVYG 209
>gi|384246524|gb|EIE20014.1| plastid ribosomal protein L4 large ribosomal subunit [Coccomyxa
subellipsoidea C-169]
Length = 278
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 163/254 (64%), Gaps = 10/254 (3%)
Query: 24 VPKPIQLAKPNSLINLPPKPLIVSSQLASP--LPILSFTGEKIGETYLDLKSAAPDTARA 81
+PKP + K S ++ + SS +A P L +LSF GE G L LK A P TA+
Sbjct: 33 LPKPQRQGKRTSGLS------VSSSAIADPAALEVLSFDGEARGSERLALKIADPFTAKG 86
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VHR ++T+ QN RRGTASTLTR EVRGGG+KPY+QK TG AR GS RTPLRPGGGV FG
Sbjct: 87 LVHRCVVTEKQNARRGTASTLTRAEVRGGGKKPYAQKGTGNARIGSRRTPLRPGGGVSFG 146
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKP DW+IKINKKE+RLA++TA+ S AA + V+E+ G KT+ +A+ +WG+
Sbjct: 147 PKPTDWTIKINKKERRLAVATALQS--AAPDIKVIEDVQGFVTDAKTRVMAQALLKWGVT 204
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
P A +V E+++++ SSRNI TLK+ + L + DIL A+ +++ S + ++ G
Sbjct: 205 PGSHALLIVNEMTQSLLLSSRNIPTLKLTSADRLIVSDILRADKVIIESSALQYIQDFLG 264
Query: 262 VEFEGDGDEEEEES 275
E + E E+
Sbjct: 265 KETSSVTPDNENEA 278
>gi|22297626|ref|NP_680873.1| 50S ribosomal protein L4 [Thermosynechococcus elongatus BP-1]
gi|46577259|sp|Q8DMN0.1|RL4_THEEB RecName: Full=50S ribosomal protein L4
gi|22293803|dbj|BAC07635.1| 50S ribosomal protein L4 [Thermosynechococcus elongatus BP-1]
Length = 210
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 141/203 (69%), Gaps = 2/203 (0%)
Query: 59 FTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQK 118
+ G GE LDL +A P+TA +VHRAL+ + N R+GT ST TR EVRGGGRKP+ QK
Sbjct: 9 WQGADSGEATLDLATAKPETASHIVHRALVRQLANARQGTVSTKTRAEVRGGGRKPWRQK 68
Query: 119 KTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEE 178
TGRAR GS R+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TA+ S E+ IVV++
Sbjct: 69 GTGRARAGSIRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTALMS--RVEDLIVVQD 126
Query: 179 FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLF 238
F RPKTKE + A++RWG++P+QK L +++E V S+RN+ TLK+L LN+F
Sbjct: 127 FADHLPRPKTKELVTALQRWGIEPEQKVLLLAADITETVALSARNVPTLKLLRADQLNVF 186
Query: 239 DILDAETLVLTPSTVDFLNGRYG 261
D+L A+ +V T + + YG
Sbjct: 187 DLLYADRIVATTGAIAKIQEVYG 209
>gi|428314334|ref|YP_007125311.1| 50S ribosomal protein L4 [Microcoleus sp. PCC 7113]
gi|428255946|gb|AFZ21905.1| 50S ribosomal protein L4, bacterial/organelle [Microcoleus sp. PCC
7113]
Length = 210
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 147/205 (71%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE++G+ LDL+ A ++A VVHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VRDWQGEEVGQATLDLRVAKEESAAHVVHRALVMQMTNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV FGPKPRD++IK+N+KE+RLA+ TA S +E+ IV
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVTFGPKPRDYNIKMNRKERRLALRTAFQS--RSEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F +F RPKTKE + A RWG++P+ K +V E+ E V S+RNI T+K++ +L
Sbjct: 124 VKDFADQFPRPKTKELLGAFVRWGIEPEVKVLIIVPEIEEMVYLSARNIPTVKLIGASSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L+A+ +V T + + L Y
Sbjct: 184 NVYDLLNADKIVTTDTALAKLQEVY 208
>gi|427718755|ref|YP_007066749.1| 50S ribosomal protein L4 [Calothrix sp. PCC 7507]
gi|427351191|gb|AFY33915.1| LSU ribosomal protein L4P [Calothrix sp. PCC 7507]
Length = 210
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 147/205 (71%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GET +L+ A +TA +VHRAL+ + N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGETTFELRVAKEETAAHIVHRALVRQLTNARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPR++++K+N+KE+RLA+ TA+ S ++ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPREFNLKLNRKERRLALRTALVS--RIDDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTKE + A+ RWG P+ K ++ E+++NV S+RNI LK++ L
Sbjct: 124 VEEFSEQLSRPKTKELVAALARWGAAPENKTLLILNEIADNVYFSARNIENLKLIPANQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +VLT S ++ + Y
Sbjct: 184 NVYDLLHADKIVLTASALEKIQEVY 208
>gi|434400540|ref|YP_007134544.1| LSU ribosomal protein L4P [Stanieria cyanosphaera PCC 7437]
gi|428271637|gb|AFZ37578.1| LSU ribosomal protein L4P [Stanieria cyanosphaera PCC 7437]
Length = 210
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 141/205 (68%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE +GE L+LK A + A +VHRAL+ M N R+GTAS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGENVGEATLELKVAREENASHIVHRALVRQMNNARQGTASSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKP+D+S+K+N+KE+RLA+ TA S AE+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPKDFSVKMNRKERRLALRTAFTS--RAEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + RPKTKE + A+ RWG++ + K +V E+ ENV S RN+ LK+L L
Sbjct: 124 VENFAEQLARPKTKEVVTALARWGVEAEAKVLLIVTEIDENVYLSVRNLSNLKLLKATNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++DIL+A +V T ++ + Y
Sbjct: 184 NIYDILEANKIVATTDALEQIQEVY 208
>gi|300865403|ref|ZP_07110208.1| 50S ribosomal protein L4 [Oscillatoria sp. PCC 6506]
gi|300336586|emb|CBN55358.1| 50S ribosomal protein L4 [Oscillatoria sp. PCC 6506]
Length = 211
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GET L+L+ A + A +VHRAL M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VRNWQGEEVGETTLELRVAKEENASHIVHRALRRQMVNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV FGPKPRD+ IK+NKKE+RLA+ TA+ S AAE+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVSFGPKPRDFDIKMNKKERRLALRTALQS-RAAEDFIV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F + RPKTKE I A+ RWG +P+ + ++ E EN+ S RN+ TLK++ +L
Sbjct: 125 VEDFSEQIARPKTKELITALARWGANPESRILLILPEKQENIYLSGRNVPTLKIILAGSL 184
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++DIL A+ +V T + + + YG
Sbjct: 185 NIYDILAADKIVTTATAIAKMQEVYG 210
>gi|443316485|ref|ZP_21045927.1| 50S ribosomal protein L4, bacterial/organelle [Leptolyngbya sp. PCC
6406]
gi|442783918|gb|ELR93816.1| 50S ribosomal protein L4, bacterial/organelle [Leptolyngbya sp. PCC
6406]
Length = 210
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G ++G T L+LK+A P+ A +VHRAL+ M N R+GT S+ TR EVRGGGRKP+
Sbjct: 6 IRDWQGGEVGTTSLELKTAKPENAAHIVHRALVRQMNNARQGTLSSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV FGPKPRD+S+K+N+KE+RLA+ TA+ AE+ +V
Sbjct: 66 RQKGTGRARAGSNRSPLWKGGGVTFGPKPRDFSVKMNRKERRLALRTAL--LGRAEDMVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+EF + RPKT+E + A+ RWG+ QK +V E E V+ S+RN+ +K+++ L
Sbjct: 124 VQEFSEQLPRPKTRELVSALGRWGVSSDQKVLLIVTERDEMVQLSARNLCNVKLISATNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L + LV+T + ++ + YG
Sbjct: 184 NVYDLLATDRLVVTATALEKIQEVYG 209
>gi|220906720|ref|YP_002482031.1| 50S ribosomal protein L4 [Cyanothece sp. PCC 7425]
gi|254803729|sp|B8HMQ5.1|RL4_CYAP4 RecName: Full=50S ribosomal protein L4
gi|219863331|gb|ACL43670.1| ribosomal protein L4/L1e [Cyanothece sp. PCC 7425]
Length = 210
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 142/206 (68%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G ++GET L+L+ A + A +VHRAL M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 IKDWQGSEVGETALELRVAKAENAAHIVHRALRRQMANARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+SIK+N KE+RLA+ TA+ S +++ IV
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYSIKMNYKERRLALRTALIS--RSDSLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F K RPKTKE A+ RWG+ P K +V + + + S+RNI T+K++ +L
Sbjct: 124 VEDFSDKLPRPKTKELAAAIARWGVQPNDKVLLIVADKQDTIYLSARNIATVKLIQATSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A+ +V T + + YG
Sbjct: 184 NVFDLLNADWIVATVEALGKIQEVYG 209
>gi|126657989|ref|ZP_01729141.1| 50S ribosomal protein L4 [Cyanothece sp. CCY0110]
gi|126620627|gb|EAZ91344.1| 50S ribosomal protein L4 [Cyanothece sp. CCY0110]
Length = 210
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 143/194 (73%), Gaps = 2/194 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ L+LK A +TA ++HRA++ + N R+GTAS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQATLELKVAKDETASHLLHRAVVRHLANARQGTASSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TAI S AE+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFGLKMNRKERRLALRTAIGS--RAEDMIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE A+ RWG++P QK +++E EN+ S+RNI LK++ +L
Sbjct: 124 VENFAEQLPQPKTKELASALGRWGVEPNQKVALVLVETDENIYLSARNICYLKIMRADSL 183
Query: 236 NLFDILDAETLVLT 249
N++D+LDA+ +V+T
Sbjct: 184 NVYDLLDADKIVIT 197
>gi|428777682|ref|YP_007169469.1| 50S ribosomal protein L4 [Halothece sp. PCC 7418]
gi|428691961|gb|AFZ45255.1| LSU ribosomal protein L4P [Halothece sp. PCC 7418]
Length = 210
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 145/206 (70%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE +GE L+LK A P+ A +VHRAL+ N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGETVGEATLELKVANPENAEHIVHRALVRQTTNSRQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R+PL GGGV+FGPKPRD++IK+N+KE+RLA+ TA+AS E+ V
Sbjct: 66 RQKGTGRARAGSSRSPLWRGGGVIFGPKPRDFNIKMNRKERRLALRTALAS--RGEDLFV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE +AM RWG++ K ++ E ENV S+RN+ +K++ +L
Sbjct: 124 VEPFAEQLPQPKTKELAQAMTRWGVELGVKTLIILEEFPENVFLSARNLPNVKLMRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++DIL A+ +V TPS ++ + YG
Sbjct: 184 NIYDILAAQKIVTTPSAIEKIQEVYG 209
>gi|304570676|ref|YP_001805429.2| 50S ribosomal protein L4 [Cyanothece sp. ATCC 51142]
gi|354552782|ref|ZP_08972090.1| ribosomal protein L4/L1e [Cyanothece sp. ATCC 51472]
gi|353556104|gb|EHC25492.1| ribosomal protein L4/L1e [Cyanothece sp. ATCC 51472]
Length = 210
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+T L+LK A +TA ++HRA++ + N R+G AST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQTTLELKVAKDETASHLLHRAVVRHLANARQGNASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TAI S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFSLKMNRKERRLALRTAIGS--RVEDMIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE A+ RWG++P QK +++E N+ S+RN+ +K+L +L
Sbjct: 124 VENFAEQLPQPKTKELASALTRWGVEPTQKVALVLVETDANIYLSARNLCHVKILRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+LDA+ +V+T + + Y
Sbjct: 184 NVYDLLDADKIVITSEAISKIQEVY 208
>gi|113476578|ref|YP_722639.1| 50S ribosomal protein L4 [Trichodesmium erythraeum IMS101]
gi|122964704|sp|Q110A8.1|RL4_TRIEI RecName: Full=50S ribosomal protein L4
gi|110167626|gb|ABG52166.1| LSU ribosomal protein L4P [Trichodesmium erythraeum IMS101]
Length = 212
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
++ GE++G+ L+L+ A ++A +VHR+L M N R+GTAST TR EVRGGGRKP+ Q
Sbjct: 8 NWQGEEVGQATLNLRVAKEESAAHIVHRSLRLQMANNRQGTASTKTRSEVRGGGRKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGGV+FGPKPRD+S K+N+KEKRLA+STA S +E+ IV+E
Sbjct: 68 KGTGRARAGSIRSPLWRGGGVIFGPKPRDYSHKMNRKEKRLALSTAFQS--RSEDLIVIE 125
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
+ +F +PKTKE ++A+ RWG+D + K ++ E ENV S RNI LK++ LN+
Sbjct: 126 DLSEQFTKPKTKELVQAITRWGIDIQAKIVLVLPEKQENVYLSGRNIAKLKIILANNLNI 185
Query: 238 FDILDAETLVLTPSTVDFLNGRYGVE 263
+DIL A+ ++ T + + + YG E
Sbjct: 186 YDILAADKIIATVTAIAKIQEVYGNE 211
>gi|119484832|ref|ZP_01619314.1| 50S ribosomal protein L4 [Lyngbya sp. PCC 8106]
gi|119457650|gb|EAW38774.1| 50S ribosomal protein L4 [Lyngbya sp. PCC 8106]
Length = 210
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ L+LK A + A +VHRAL+ M N R+G+AS+ TR EVRGGGRKP+
Sbjct: 6 VRNWEGEQVGQANLELKVAKEENAAHIVHRALVRQMNNARQGSASSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TA+ S E+ +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFSQKMNRKERRLALRTALQS--RIEDIVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ + AM RWG++P+ K ++ E ENV S RNI +++ +L
Sbjct: 124 VEEFLEQLPRPKTKDLVAAMSRWGIEPESKVLLVLPEKQENVYLSGRNIARMRICLADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++DIL A+ +V T + ++ + YG
Sbjct: 184 NVYDILHADNIVTTAAALEKIQEVYG 209
>gi|282899953|ref|ZP_06307914.1| Ribosomal protein L4/L1e [Cylindrospermopsis raciborskii CS-505]
gi|281195223|gb|EFA70159.1| Ribosomal protein L4/L1e [Cylindrospermopsis raciborskii CS-505]
Length = 213
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 144/208 (69%), Gaps = 5/208 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+T +L+ A +TA +VHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQTSFELRVAKEETASHIVHRALVRQMTNSRQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD++IK+N+KE+RLA+ TA S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFNIKLNRKERRLALRTAFVS--RREDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK---SSRNIGTLKMLTP 232
VEEF + +RPK+KE + A+ RWG QK ++ E+ +N E S+RN+ +K++
Sbjct: 124 VEEFTDQLQRPKSKELVAALARWGATADQKTLLILSEIGQNTETISLSARNVENIKVIAA 183
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FD+L A+ +V+T S + + Y
Sbjct: 184 DQLNVFDLLHADKIVVTSSALTKIQEVY 211
>gi|428305870|ref|YP_007142695.1| 50S ribosomal protein L4 [Crinalium epipsammum PCC 9333]
gi|428247405|gb|AFZ13185.1| ribosomal protein L4/L1e [Crinalium epipsammum PCC 9333]
Length = 210
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 2/198 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++ E L+L+ A D A +VHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VRNWQGEEVSEATLELRVAKEDNASHIVHRALVRQMTNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE RLA+ TA+ S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYDLKMNRKELRLALKTALMS--RTEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F K RPKTKE +EA+ RWG+ K +V + ENV S+RN+ LK++ L
Sbjct: 124 VEDFADKLARPKTKELLEAIARWGVSLDAKILLIVSQSEENVNLSARNVANLKLIPVNNL 183
Query: 236 NLFDILDAETLVLTPSTV 253
N++D+L A+ +V T S +
Sbjct: 184 NVYDLLAADNIVATASAL 201
>gi|428774006|ref|YP_007165794.1| 50S ribosomal protein L4 [Cyanobacterium stanieri PCC 7202]
gi|428688285|gb|AFZ48145.1| LSU ribosomal protein L4P [Cyanobacterium stanieri PCC 7202]
Length = 212
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 145/209 (69%), Gaps = 3/209 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GE L+++ A + A +VHRAL+ + N+R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGEATLEMRVAKEENAEHIVHRALVRQLHNQRQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKP+D+++K+N+KE+RLA+ TA S +E+ +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPKDYNMKMNRKERRLALRTAFIS--RSEDLVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTLKMLTPRT 234
VE F+ + E PKTK +EA RWG+D K +V E S+NV S RN+G +KM+
Sbjct: 124 VENFNQQIEAPKTKTILEAFSRWGVDQHCKILLVVTEPTSDNVYLSVRNLGNVKMINHDG 183
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DIL+A+ +V+T + + Y E
Sbjct: 184 LNIYDILNADKIVVTSDALAKIQEVYNAE 212
>gi|282898356|ref|ZP_06306347.1| Ribosomal protein L4/L1e [Raphidiopsis brookii D9]
gi|281196887|gb|EFA71792.1| Ribosomal protein L4/L1e [Raphidiopsis brookii D9]
Length = 213
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 146/208 (70%), Gaps = 5/208 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+T +L+ A +TA +VHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQTSFELRIAKEETASHIVHRALVRQMTNSRQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD++IK+N+KE+RLA+ TA S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFNIKLNRKERRLALRTAFVS--RREDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV---SENVEKSSRNIGTLKMLTP 232
VEEF + +RPK+KE + A+ RWG +QK ++ E+ +E + S+RN+ +K++
Sbjct: 124 VEEFTDQLQRPKSKELVAALARWGATAEQKTLLILSEIGQSTETISLSARNVENIKVIAA 183
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FD+L A+ +V+T S ++ + Y
Sbjct: 184 DQLNVFDLLHADKIVVTSSALNKIQEVY 211
>gi|427726142|ref|YP_007073419.1| 50S ribosomal protein L4 [Leptolyngbya sp. PCC 7376]
gi|427357862|gb|AFY40585.1| LSU ribosomal protein L4P [Leptolyngbya sp. PCC 7376]
Length = 210
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 142/194 (73%), Gaps = 2/194 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ G+++G+ LDLK A + A +VHRAL+ + N R+GT+S+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGDEVGKADLDLKVAKEENASHIVHRALVRQLNNARQGTSSSKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R+PL GGGV+FGPKP+++++K+N+KE+RLA+ TA S AE+ IV
Sbjct: 66 RQKGTGRARAGSSRSPLWRGGGVIFGPKPKEYNLKMNRKERRLALRTAFQS--RAEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + PKTK+ + AM RWG++ QK ++ E++ENV S+RN+ +LK++ L
Sbjct: 124 VESFAAQLTAPKTKDLLAAMNRWGVESDQKVLLIMDELAENVHLSARNVASLKLIPANGL 183
Query: 236 NLFDILDAETLVLT 249
N+FDIL+A +V+T
Sbjct: 184 NVFDILNANKIVVT 197
>gi|148243216|ref|YP_001228373.1| 50S ribosomal protein L4 [Synechococcus sp. RCC307]
gi|147851526|emb|CAK29020.1| 50S ribosomal protein L4 [Synechococcus sp. RCC307]
Length = 210
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G++ G+ LDLK A +A ++HRA++ + N R+GTASTLTR EVRGGGRKPY
Sbjct: 5 IQDWQGKEAGKASLDLKVAKETSAADLIHRAVVRQLANARQGTASTLTRSEVRGGGRKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG+VFGPKPR + + +N+KE+RLA+ TA+ S +E+ +V
Sbjct: 65 KQKGTGRARQGSIRTPLRPGGGIVFGPKPRSYELDMNRKERRLALRTALMS--RSEDMVV 122
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F K +PKTKE + A+ RWG+ K ++ ++S+NV S RN+ LK++ L
Sbjct: 123 VKAFGDKLAKPKTKEVLSALERWGVPAGSKVLMVLADISDNVRLSVRNLPQLKLIAADQL 182
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A+ LV++ + + YG
Sbjct: 183 NVFDLLNAQKLVVSEDALTKIQEVYG 208
>gi|119511178|ref|ZP_01630295.1| 50S ribosomal protein L4 [Nodularia spumigena CCY9414]
gi|119464166|gb|EAW45086.1| 50S ribosomal protein L4 [Nodularia spumigena CCY9414]
Length = 212
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 141/200 (70%), Gaps = 4/200 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GET +L+ A TA +VHRAL+ M N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGETTFELRVAKESTASHIVHRALVRQMTNSRQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD++ K+N+KE+RLA+ TA S A++ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYNQKLNRKERRLALRTAFVS--RADDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL--VMEVSENVEKSSRNIGTLKMLTPR 233
V++F + RPKTKE + A+ RWG P+ KA + ++ +NV S+RNI LK++
Sbjct: 124 VQDFSNELSRPKTKELVAALARWGAAPENKALLIMPIISSEDNVYLSARNIQNLKLIAAD 183
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++D+L A+ +V+T S +
Sbjct: 184 QLNVYDLLHADKIVITASAL 203
>gi|186684509|ref|YP_001867705.1| 50S ribosomal protein L4 [Nostoc punctiforme PCC 73102]
gi|226730699|sp|B2ITQ4.1|RL4_NOSP7 RecName: Full=50S ribosomal protein L4
gi|186466961|gb|ACC82762.1| ribosomal protein L4/L1e [Nostoc punctiforme PCC 73102]
Length = 212
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 144/205 (70%), Gaps = 4/205 (1%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
++ GE++GET +L+ A +TA +VHRAL+ + N R+G AST TR EVRGGGRKP+ Q
Sbjct: 8 NWQGEQVGETTFELRVAKEETASHIVHRALVRQLTNARQGNASTKTRAEVRGGGRKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA ++ IVVE
Sbjct: 68 KGTGRARAGSIRSPLWRGGGVIFGPKPRDFDLKLNRKERRLALRTAF--VGRIDDLIVVE 125
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV--SENVEKSSRNIGTLKMLTPRTL 235
EF + RPKTK+ + A+ RWG+ P+ KA ++ E+ ++NV S+RNI LK++ L
Sbjct: 126 EFSTELSRPKTKDLVAALARWGVVPESKALLILSEIADTDNVYLSARNIENLKLIAANQL 185
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N+FD+L A+ +V+T S ++ + Y
Sbjct: 186 NVFDLLHADKIVVTASALEKIQEVY 210
>gi|428781701|ref|YP_007173487.1| 50S ribosomal protein L4 [Dactylococcopsis salina PCC 8305]
gi|428695980|gb|AFZ52130.1| 50S ribosomal protein L4, bacterial/organelle [Dactylococcopsis
salina PCC 8305]
Length = 210
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 146/206 (70%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE +GE L+LK A P+ A +VHRA++ N R+G+AST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEAVGEATLELKVAKPENAEHIVHRAVVRHTTNARQGSASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R+PL GGGV+FGPKPRD++IK+N+KE+RLA+ TA+AS E+ V
Sbjct: 66 RQKGTGRARAGSSRSPLWRGGGVIFGPKPRDFNIKMNRKERRLALRTALAS--RGEDLFV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTK+ +A+ RWG++P K ++ E ++NV S+RN+ +K++ +L
Sbjct: 124 VEPFAEQLPQPKTKDLAQALTRWGIEPGVKVLMILDEFADNVALSARNLPNVKLIRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L A +V TPS ++ + YG
Sbjct: 184 NVYDVLLAHKIVTTPSAIEKIQEVYG 209
>gi|428205266|ref|YP_007089619.1| 50S ribosomal protein L4 [Chroococcidiopsis thermalis PCC 7203]
gi|428007187|gb|AFY85750.1| LSU ribosomal protein L4P [Chroococcidiopsis thermalis PCC 7203]
Length = 210
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 143/205 (69%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE +G+ L+L+ A +A VVHRALI + N R+GTA+T TR EVRGGGRKP+
Sbjct: 6 VKNWQGEAVGQATLELRVAKETSASHVVHRALIKQLTNARQGTANTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV FGPKPR +++K+N+KE+ LA+ TA AS A++ +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVTFGPKPRTYNLKMNRKEELLALRTAFAS--RADDMVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F + +PKTKE A+ RWG+DP K +V E +ENV S+RNI L +++ L
Sbjct: 124 VEDFAEQISQPKTKEMTAAIARWGIDPGTKVLLIVAEETENVYLSARNIAKLTLISADEL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++DIL+A+T+V T S ++ + Y
Sbjct: 184 NVYDILNADTIVATSSALNMIQEVY 208
>gi|434391778|ref|YP_007126725.1| LSU ribosomal protein L4P [Gloeocapsa sp. PCC 7428]
gi|428263619|gb|AFZ29565.1| LSU ribosomal protein L4P [Gloeocapsa sp. PCC 7428]
Length = 210
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 143/204 (70%), Gaps = 2/204 (0%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
++ GE++G+ LDL+ A +A +VHRAL+ N R+GTAS+ TR EVRGGGRKP+ Q
Sbjct: 8 NWQGEEVGQAALDLQVANEKSAAHIVHRALVRQTTNARQGTASSKTRAEVRGGGRKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGGV+FGPKPRD+ IK+N+KE+RLA+ TA+ S AE+ +VVE
Sbjct: 68 KGTGRARAGSIRSPLWRGGGVIFGPKPRDYEIKMNRKERRLALRTALVS--RAEDMVVVE 125
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
+F + RPKTK+ I A+ RWG+D K ++ E+ E V S+RN+ +K++ LN+
Sbjct: 126 DFASELPRPKTKDLIAAIARWGIDTDTKVLLILPEMVETVYLSARNVAQVKLIAADQLNV 185
Query: 238 FDILDAETLVLTPSTVDFLNGRYG 261
+D+L+A+ +V T + ++ + YG
Sbjct: 186 YDLLNADRIVTTVAAIEKIQEVYG 209
>gi|307154841|ref|YP_003890225.1| 50S ribosomal protein L4 [Cyanothece sp. PCC 7822]
gi|306985069|gb|ADN16950.1| ribosomal protein L4/L1e [Cyanothece sp. PCC 7822]
Length = 210
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ G+++G+T L+LK A +TA ++HRA++ + N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWDGDEVGQTPLELKVAKEETASHILHRAVVRQLANARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+++K+N+KE+RLA+ TA+ + AEN I+
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYNLKMNRKERRLALRTALNN--QAENLII 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKT+E A+ RWG+ K K ++ E+ ENV S+RNI +K++ +L
Sbjct: 124 VENFGEQFPQPKTRELASALARWGVTEKDKVLLILSEIPENVGLSARNICNVKVIKADSL 183
Query: 236 NLFDILDAETLVLTPSTVD 254
N++D+L A LV T ++
Sbjct: 184 NVYDLLTASKLVATSDALE 202
>gi|145354841|ref|XP_001421683.1| Plastid ribosomal protein L4 large ribosomal subunit [Ostreococcus
lucimarinus CCE9901]
gi|144581921|gb|ABO99976.1| Plastid ribosomal protein L4 large ribosomal subunit [Ostreococcus
lucimarinus CCE9901]
Length = 251
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 144/211 (68%), Gaps = 2/211 (0%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ + ++F G K L+LK+A + AR +VH+ ++ QN RRGTASTLT+ EVRGG
Sbjct: 36 AAAIDAVTFDGAKSSAATLELKTARAEVARGLVHKYVVMVRQNARRGTASTLTKSEVRGG 95
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKP+ QK TG AR GS+RTPL+PGGGV FGPKPRDWSIK+NKKE+RLA++TA+ SAA+A
Sbjct: 96 GRKPFKQKGTGNARAGSSRTPLKPGGGVSFGPKPRDWSIKMNKKERRLAMATALQSAASA 155
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
IVV++ G P T F +++ WG+ +KA + + +ENV KS+RNI +
Sbjct: 156 --MIVVDDISGNISAPGTNAFNKSLMAWGVGASEKAYVITKDANENVAKSARNIERVVQT 213
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DIL+A+ +++ S + ++ +G
Sbjct: 214 DVSHLNVYDILNADKVIVEASALAHISSFFG 244
>gi|16329940|ref|NP_440668.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803]
gi|383321683|ref|YP_005382536.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324852|ref|YP_005385705.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490736|ref|YP_005408412.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436003|ref|YP_005650727.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803]
gi|451814099|ref|YP_007450551.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803]
gi|2500235|sp|P73319.1|RL4_SYNY3 RecName: Full=50S ribosomal protein L4
gi|1652426|dbj|BAA17348.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803]
gi|339273035|dbj|BAK49522.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803]
gi|359271002|dbj|BAL28521.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274172|dbj|BAL31690.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277342|dbj|BAL34859.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957832|dbj|BAM51072.1| 50S ribosomal protein L4 [Bacillus subtilis BEST7613]
gi|451780068|gb|AGF51037.1| 50S ribosomal protein L4 [Synechocystis sp. PCC 6803]
Length = 210
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 141/206 (68%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G L L+ A + A +VHRAL+ N R+G AS TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGNASLTLRVAKEENAAHIVHRALVRQQNNARQGNASAKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TAIAS A+N +V
Sbjct: 66 KQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTAIAS--RADNMVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKTKE A+ RWG P+++ ++ E+ ENV S RNI LK+L L
Sbjct: 124 VEAFGDQFSQPKTKELATALTRWGAKPEKRVLLILDEIPENVFLSGRNIPYLKILRADNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L A+T+V T + ++ + YG
Sbjct: 184 NIYDVLVADTIVATATALEKIQEVYG 209
>gi|427707989|ref|YP_007050366.1| 50S ribosomal protein L4 [Nostoc sp. PCC 7107]
gi|427360494|gb|AFY43216.1| LSU ribosomal protein L4P [Nostoc sp. PCC 7107]
Length = 210
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 143/205 (69%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ DL+ A TA +VHRAL+ N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQKTFDLRVAKEATAAHIVHRALVRQTTNARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPR++ +K+N+KE+RLA+ TA S A++ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPREYDLKMNRKERRLALRTAFVS--RADDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ + A+ RWG +P+QK+ ++ E+++ V S RN+ LK++ L
Sbjct: 124 VEEFSSELSRPKTKDLVAALARWGANPEQKSLLILSEIADTVYLSGRNVENLKIIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V+T ++ + Y
Sbjct: 184 NVYDLLHADKIVVTAPALEKIQEVY 208
>gi|218440624|ref|YP_002378953.1| 50S ribosomal protein L4 [Cyanothece sp. PCC 7424]
gi|226730648|sp|B7KHY8.1|RL4_CYAP7 RecName: Full=50S ribosomal protein L4
gi|218173352|gb|ACK72085.1| ribosomal protein L4/L1e [Cyanothece sp. PCC 7424]
Length = 210
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ G+++G+T L+LK A +TA ++HRA++ + N R+G AST TR EVRGGGRKP+
Sbjct: 6 VKNWQGDEVGQTSLELKVAKEETASHILHRAVVRHLANARQGNASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TA+ S AEN I+
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTALNS--KAENLII 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE A+ RWG+ K K ++ E+ EN+ S+RNI +K++ ++
Sbjct: 124 VENFAPELPQPKTKELALALTRWGVTEKDKVLLILSEIPENISLSARNICNVKLIRADSI 183
Query: 236 NLFDILDAETLVLT 249
N++DIL A LV T
Sbjct: 184 NVYDILSASKLVAT 197
>gi|390438093|ref|ZP_10226591.1| 50S ribosomal protein L4 [Microcystis sp. T1-4]
gi|389838493|emb|CCI30715.1| 50S ribosomal protein L4 [Microcystis sp. T1-4]
Length = 210
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+ G L+LK+A P+TA+ ++HR +I+ + R+G AS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVISHLAAARQGNASSKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KEKRLA+ TA+ S A+N IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALIS--QADNFIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKTKE A+ RWG P++K ++ E+ ENV S RNI LK++ +L
Sbjct: 124 VESFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L A+ ++ T + + + YG
Sbjct: 184 NVYDVLLADRVIATAAALAKIEEVYG 209
>gi|443313567|ref|ZP_21043178.1| 50S ribosomal protein L4, bacterial/organelle [Synechocystis sp.
PCC 7509]
gi|442776510|gb|ELR86792.1| 50S ribosomal protein L4, bacterial/organelle [Synechocystis sp.
PCC 7509]
Length = 212
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 137/198 (69%), Gaps = 2/198 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+T L+LK A TA VVHRALI + N R+G A T TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQTTLELKVAKEKTASHVVHRALIRQLANARQGNACTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ K+N+KE+RLA+ TA S + +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFETKLNRKERRLALRTAFFS--RTNDMVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF +F +PKTKE + A+ RWG+D K +V E ++N+ S+RN+ LKM L
Sbjct: 124 VEEFGDQFSKPKTKELLSAIARWGVDSSAKILLIVTEPNQNIYLSARNVAGLKMYPAHQL 183
Query: 236 NLFDILDAETLVLTPSTV 253
N++D+L+A+ ++ T + +
Sbjct: 184 NIYDVLNADKIITTAAAL 201
>gi|425447752|ref|ZP_18827734.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9443]
gi|425455929|ref|ZP_18835640.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9807]
gi|389731581|emb|CCI04346.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9443]
gi|389803079|emb|CCI17945.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9807]
Length = 210
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+ G L+LK+A P+TA+ ++HR +++ + R+G AST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVVSHLAAARQGNASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KEKRLA+ TA+ S A+N IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALIS--QADNFIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKTKE A+ RWG P++K ++ E+ ENV S RNI LK++ +L
Sbjct: 124 VESFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D++ A+ ++ T + + + YG
Sbjct: 184 NVYDVILADRVIATAAALAKIEEVYG 209
>gi|209528358|ref|ZP_03276809.1| ribosomal protein L4/L1e [Arthrospira maxima CS-328]
gi|376007826|ref|ZP_09785011.1| 50S ribosomal subunit protein L4 [Arthrospira sp. PCC 8005]
gi|423062933|ref|ZP_17051723.1| ribosomal protein L4/L1e [Arthrospira platensis C1]
gi|209491211|gb|EDZ91615.1| ribosomal protein L4/L1e [Arthrospira maxima CS-328]
gi|375323802|emb|CCE20764.1| 50S ribosomal subunit protein L4 [Arthrospira sp. PCC 8005]
gi|406715512|gb|EKD10666.1| ribosomal protein L4/L1e [Arthrospira platensis C1]
Length = 210
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 142/206 (68%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE++G+T L+LK A + A +VHRAL+ R+GTAST TR EVRGGGRKP+
Sbjct: 6 IRNWEGEEVGQTTLELKVAKEENASHIVHRALVRQQAAARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TA S AE+ +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSVKMNRKERRLALRTAFQS--RAEDIVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ +A+ RWG+ P+ K ++ E ENV S RN+ +++ +L
Sbjct: 124 VEEFVTQLPRPKTKDLTDALARWGVSPEAKVLLVLPEKQENVYLSGRNVAKIRICLADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L A+ +V T + + + YG
Sbjct: 184 NVYDVLAADKIVTTANALAKIQEVYG 209
>gi|434388534|ref|YP_007099145.1| 50S ribosomal protein L4, bacterial/organelle [Chamaesiphon minutus
PCC 6605]
gi|428019524|gb|AFY95618.1| 50S ribosomal protein L4, bacterial/organelle [Chamaesiphon minutus
PCC 6605]
Length = 211
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 136/198 (68%), Gaps = 2/198 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE+ G L+L A + A +VHRALI N R+GTAS TR EVRGGGRKP+
Sbjct: 6 IRNWQGEEAGSATLELAVAKEENASHIVHRALIRQTNNARQGTASAKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKP+D+++K+N+KE+RLA+ TA+ E+ IV
Sbjct: 66 KQKGTGRARAGSIRSPLWRGGGVIFGPKPKDYNMKMNRKERRLALRTAL--MGRIEDIIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F +PKTKEF++AM RWG++P K +V EV +N S RNI +KM++ L
Sbjct: 124 VQDFAANLAQPKTKEFVQAMTRWGVEPDGKVLVIVAEVDDNTLLSVRNIANVKMISASGL 183
Query: 236 NLFDILDAETLVLTPSTV 253
N+FD+L+A+ +V T +
Sbjct: 184 NVFDLLNADQIVATAEAI 201
>gi|218245139|ref|YP_002370510.1| 50S ribosomal protein L4 [Cyanothece sp. PCC 8801]
gi|257058164|ref|YP_003136052.1| 50S ribosomal protein L4 [Cyanothece sp. PCC 8802]
gi|226730649|sp|B7K334.1|RL4_CYAP8 RecName: Full=50S ribosomal protein L4
gi|218165617|gb|ACK64354.1| ribosomal protein L4/L1e [Cyanothece sp. PCC 8801]
gi|256588330|gb|ACU99216.1| ribosomal protein L4/L1e [Cyanothece sp. PCC 8802]
Length = 211
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 142/205 (69%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE++G+ L+LK A + A +VHRAL+ N R+GTAST TR EVRGGGRKP+
Sbjct: 6 IKNWQGEEVGQATLELKVAKEENAAHIVHRALVRQQTNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV FGPKP+D+++K+N+KE+RLA+ TA+ S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVTFGPKPKDFNVKMNRKERRLALRTALDS--RIEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE + A+ RWG+D QK +V E+++N++ S+RN+ +K+L L
Sbjct: 124 VENFAEQLTQPKTKELVSALTRWGIDGNQKVVLIVSEITDNIQLSARNVPYIKLLKADGL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V T + + Y
Sbjct: 184 NVYDLLVADKIVATAEALSKVQEVY 208
>gi|428203653|ref|YP_007082242.1| 50S ribosomal protein L4 [Pleurocapsa sp. PCC 7327]
gi|427981085|gb|AFY78685.1| 50S ribosomal protein L4, bacterial/organelle [Pleurocapsa sp. PCC
7327]
Length = 210
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ L+++ A + A +VHRAL+ + N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGKAPLEMRVAKEENAPYIVHRALVRHLANARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TA S E+TIV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSLKMNRKERRLALRTAFLS--RVEDTIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + ++PKTKE A+ RWG+ + K ++ EV ENV S+RN+ +K++ +L
Sbjct: 124 VENFADQLQQPKTKELASALTRWGVASENKVLLIMSEVPENVYLSARNMSNVKLIKADSL 183
Query: 236 NLFDILDAETLVLT 249
N++D+L A+T+V T
Sbjct: 184 NIYDVLSADTIVTT 197
>gi|170077684|ref|YP_001734322.1| 50S ribosomal protein L4 [Synechococcus sp. PCC 7002]
gi|169885353|gb|ACA99066.1| ribosomal protein L4 [Synechococcus sp. PCC 7002]
Length = 210
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ GE++G+ LD K A + A +VHRAL+ + N R+GT+ST TR EVRGGGRK
Sbjct: 4 CAVKNWQGEEVGQANLDFKVAKEENAAHIVHRALVRQLNNARQGTSSTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGGV+FGPKP+++++K+N+KE+RLA+ TA S E+
Sbjct: 64 PWRQKGTGRARAGSIRSPLWKGGGVIFGPKPKEYNLKMNRKERRLALRTAFHS--RNEDL 121
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVVE F +F PKTKE + AM RWG+ +K ++ E+++NV S+RNI ++KM+
Sbjct: 122 IVVENFAEQFAAPKTKELVNAMTRWGVASGEKVLLVLAEMTDNVYLSARNIASVKMVPAD 181
Query: 234 TLNLFDILDAETLVLT 249
LN+FDIL+A +V+T
Sbjct: 182 GLNIFDILNAGKIVVT 197
>gi|425439141|ref|ZP_18819473.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9717]
gi|389714943|emb|CCI00531.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9717]
Length = 210
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+ G L+LK+A P+TA+ ++HR +++ + R+G AST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVVSHLAAARQGNASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KEKRLA+ TA+ S ++N IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALIS--QSDNFIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKTKE A+ RWG P++K ++ E+ ENV S RNI LK++ +L
Sbjct: 124 VESFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D++ A+ ++ T + + + YG
Sbjct: 184 NVYDVILADRVIATAAALAKIEEVYG 209
>gi|166368483|ref|YP_001660756.1| 50S ribosomal protein L4 [Microcystis aeruginosa NIES-843]
gi|422301312|ref|ZP_16388680.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9806]
gi|425436590|ref|ZP_18817025.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9432]
gi|425452012|ref|ZP_18831831.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 7941]
gi|425462421|ref|ZP_18841895.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9808]
gi|425465092|ref|ZP_18844402.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9809]
gi|440752301|ref|ZP_20931504.1| ribosomal L4/L1 family protein [Microcystis aeruginosa TAIHU98]
gi|443664000|ref|ZP_21133323.1| ribosomal L4/L1 family protein [Microcystis aeruginosa DIANCHI905]
gi|189029509|sp|B0JI02.1|RL4_MICAN RecName: Full=50S ribosomal protein L4
gi|159028205|emb|CAO89812.1| rplD [Microcystis aeruginosa PCC 7806]
gi|166090856|dbj|BAG05564.1| 50S ribosomal protein L4 [Microcystis aeruginosa NIES-843]
gi|389678671|emb|CCH92499.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9432]
gi|389766358|emb|CCI07980.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 7941]
gi|389792280|emb|CCI11951.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9806]
gi|389824580|emb|CCI26425.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9808]
gi|389832744|emb|CCI23405.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9809]
gi|440176794|gb|ELP56067.1| ribosomal L4/L1 family protein [Microcystis aeruginosa TAIHU98]
gi|443331702|gb|ELS46347.1| ribosomal L4/L1 family protein [Microcystis aeruginosa DIANCHI905]
Length = 210
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+ G L+LK+A P+TA+ ++HR +++ + R+G AS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVVSHLAAARQGNASSKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KEKRLA+ TA+ S A+N IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALIS--QADNFIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKTKE A+ RWG P++K ++ E+ ENV S RNI LK++ +L
Sbjct: 124 VESFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D++ A+ ++ T + + + YG
Sbjct: 184 NVYDVILADRVIATAAALAKIEEVYG 209
>gi|255079010|ref|XP_002503085.1| predicted protein [Micromonas sp. RCC299]
gi|226518351|gb|ACO64343.1| predicted protein [Micromonas sp. RCC299]
Length = 276
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 150/219 (68%), Gaps = 3/219 (1%)
Query: 43 PLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTL 102
PL V + LA+ + +SF G G LD+K A PD A+ +VH+ ++ QN RRGTASTL
Sbjct: 54 PLRVDA-LAAQVSKVSFDGASAGTATLDVKVAKPDVAKGLVHKYVVMVRQNARRGTASTL 112
Query: 103 TRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIST 162
T+ EVRGGGRKP+ QK TG AR GS+RTPL+PGGGVVFGPKP+DWSIK+NKKE+RLA++T
Sbjct: 113 TKSEVRGGGRKPFKQKGTGNARAGSSRTPLKPGGGVVFGPKPKDWSIKMNKKERRLAMAT 172
Query: 163 AIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSR 222
AI SAAAA + IVV+ G PKTK A++ WG+ +KA + + E V S+R
Sbjct: 173 AIQSAAAASSMIVVDSLAG--AAPKTKAMATALKSWGVAEGEKAYIITKDAPEGVTLSTR 230
Query: 223 NIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
N+ + + LN++D+L+A+ +V+ S + ++N YG
Sbjct: 231 NMARVVQTDIKHLNVYDVLNADKVVVEESALQYINDFYG 269
>gi|75906915|ref|YP_321211.1| 50S ribosomal protein L4 [Anabaena variabilis ATCC 29413]
gi|109893575|sp|Q3MFC0.1|RL4_ANAVT RecName: Full=50S ribosomal protein L4
gi|75700640|gb|ABA20316.1| LSU ribosomal protein L4P [Anabaena variabilis ATCC 29413]
Length = 210
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 141/205 (68%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ +L+ A TA +VHRAL+ N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGQKTFELRVAKETTAAHIVHRALVRQQTNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA+ S ++ I+
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFDLKMNRKERRLALRTALVS--RIDDLIL 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ + A RWG +P+ K ++ E ENV S+RNI LK++ L
Sbjct: 124 VEEFSNELSRPKTKDLVAAFTRWGAEPESKILLILSEFPENVYLSARNIENLKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V+T S ++ + Y
Sbjct: 184 NVYDLLHADKIVVTTSALEKIQEVY 208
>gi|411119516|ref|ZP_11391896.1| 50S ribosomal protein L4, bacterial/organelle [Oscillatoriales
cyanobacterium JSC-12]
gi|410711379|gb|EKQ68886.1| 50S ribosomal protein L4, bacterial/organelle [Oscillatoriales
cyanobacterium JSC-12]
Length = 211
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 142/207 (68%), Gaps = 3/207 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+++G T LDLK A+ A +VHRAL+ + N R+GT ST TR EV GGGRKP+
Sbjct: 6 VKDWEGKEVGSTSLDLKVASEQNAAHIVHRALVRQLANARQGTVSTKTRAEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TA S ++ ++
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYSLKMNRKERRLALRTAFQS--RTDDLVI 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKMLTPRT 234
V++F K RPKTK+ + A++ WG DP + L++ E E + S+RN+ L++++
Sbjct: 124 VQDFADKLPRPKTKDLVNALKGWGADPSESKVLLILAERDETIYLSARNVEKLRLISATN 183
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+FD+L A+ +V T S ++ + YG
Sbjct: 184 LNIFDLLTADYIVATTSAIEKIQEVYG 210
>gi|17231706|ref|NP_488254.1| 50S ribosomal protein L4 [Nostoc sp. PCC 7120]
gi|46576839|sp|Q8YPI0.1|RL4_ANASP RecName: Full=50S ribosomal protein L4
gi|17133349|dbj|BAB75913.1| 50S ribosomal protein L4 [Nostoc sp. PCC 7120]
Length = 210
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 140/205 (68%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+IG+ +L+ A TA +VHRAL+ N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQIGQKTFELRVAKETTAAHIVHRALVRQQTNARQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA S ++ I+
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFDLKMNRKERRLALRTAFVS--RIDDLIL 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ + A RWG +P+ K ++ E ENV S+RNI LK++ L
Sbjct: 124 VEEFSNELSRPKTKDLVAAFTRWGAEPESKILLILSEFPENVYLSARNIENLKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L A+ +V+T S ++ + Y
Sbjct: 184 NVYDLLHADKIVVTTSALEKIQEVY 208
>gi|67923584|ref|ZP_00517056.1| Ribosomal protein L4/L1e [Crocosphaera watsonii WH 8501]
gi|416398005|ref|ZP_11686765.1| LSU ribosomal protein L4p (L1e) [Crocosphaera watsonii WH 0003]
gi|67854554|gb|EAM49841.1| Ribosomal protein L4/L1e [Crocosphaera watsonii WH 8501]
gi|357262584|gb|EHJ11698.1| LSU ribosomal protein L4p (L1e) [Crocosphaera watsonii WH 0003]
Length = 210
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 146/205 (71%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ L+LK A ++A ++HRA++ + N R+G AS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEVGQATLELKVAKEESASHLLHRAVVRHLANARQGNASSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TAIAS E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFSKKMNRKERRLALRTAIAS--RVEDMIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE A+ RWG++P +K +++E +N+ S+RN+ +K+L +L
Sbjct: 124 VENFTEQLPQPKTKELASALARWGVEPSEKVALVLLEAGDNIYLSARNLCFVKILRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+L+A+ +V+T ++ + Y
Sbjct: 184 NVYDLLNADKIVITSESLSKIQEVY 208
>gi|443474844|ref|ZP_21064812.1| LSU ribosomal protein L4P [Pseudanabaena biceps PCC 7429]
gi|443020433|gb|ELS34395.1| LSU ribosomal protein L4P [Pseudanabaena biceps PCC 7429]
Length = 224
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 139/206 (67%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ +TG ++GE LDL+ A +A+ +VHRAL+ + N R+GTAS+ TR EVRGGGRKP+
Sbjct: 4 VIDWTGNEVGEISLDLRVAKEASAKGLVHRALVRQLANARQGTASSKTRAEVRGGGRKPF 63
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGG +FGPKPRD+ K+N+KE+RLA+ TA +A + I+
Sbjct: 64 RQKGTGRARAGSTRSPLTRGGGAIFGPKPRDYETKMNRKERRLALRTAFIGRSA--DLII 121
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F +PKTKE +A+ RWG+ QK + EN+ S+RNI L+++ L
Sbjct: 122 VEDFAVNLAQPKTKELCQALERWGVTVGQKTLIITDRKEENIILSARNIQNLQLIAADQL 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FDIL++E +V T S + ++ YG
Sbjct: 182 NMFDILNSEKIVATRSAIAKIHEVYG 207
>gi|425470363|ref|ZP_18849233.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9701]
gi|389884043|emb|CCI35614.1| 50S ribosomal protein L4 [Microcystis aeruginosa PCC 9701]
Length = 210
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+ G L+LK+A P+TA+ ++HR +++ + R+G AS+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEAGTGTLELKTAKPETAKHLIHRVVVSHLAAARQGNASSKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KEKRLA+ TA+ S ++N IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKVNRKEKRLALRTALIS--QSDNFIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F +F +PKTKE A+ RWG P++K ++ E+ ENV S RNI LK++ +L
Sbjct: 124 VESFAEQFSQPKTKELTAALSRWGASPEEKILLILTEIPENVYLSGRNICNLKIIRADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D++ A+ ++ T + + + YG
Sbjct: 184 NVYDVILADRVIATAAALAKIEEVYG 209
>gi|303283616|ref|XP_003061099.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457450|gb|EEH54749.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 254
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 143/214 (66%), Gaps = 2/214 (0%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
LA+ + +SF G L LK+A D A+ +VH+ ++ QN RRGTASTLT+ EVRG
Sbjct: 38 LAAAVEKVSFDGATKSTADLTLKTARADVAKGLVHKYVVMVRQNARRGTASTLTKSEVRG 97
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP++QK TG AR GS R+PL+PGGGV FGPKP+DWSIK+NKKE+RLA++TAI SAA
Sbjct: 98 GGRKPFNQKGTGNARAGSIRSPLKPGGGVSFGPKPKDWSIKMNKKERRLAMATAIQSAAG 157
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
+ IVV++ KTK A++ WG++ +KA + + S+ V+ S+RN+ +
Sbjct: 158 --SMIVVDDLGANVSVAKTKTMANALKAWGVEEGEKAYVITKDASDAVKLSTRNMAKVVQ 215
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++D+L+A+ +V+ S + ++N YG E
Sbjct: 216 SDISHLNVYDVLNADKVVVEESALKYINDFYGAE 249
>gi|158337811|ref|YP_001518987.1| 50S ribosomal protein L4 [Acaryochloris marina MBIC11017]
gi|359457979|ref|ZP_09246542.1| 50S ribosomal protein L4 [Acaryochloris sp. CCMEE 5410]
gi|189029488|sp|B0C1D4.1|RL4_ACAM1 RecName: Full=50S ribosomal protein L4
gi|158308052|gb|ABW29669.1| 50S ribosomal protein L4 [Acaryochloris marina MBIC11017]
Length = 210
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 136/198 (68%), Gaps = 2/198 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE G+ LDLK A + A +VHRAL M N R+GTAS+ TR EVRGGGRKP+
Sbjct: 6 VRNWQGEDAGQAELDLKVANEENAAHIVHRALRRQMNNARQGTASSKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R+PL GGGV+FGPKPR +S K+N+KE+RLA+ TA AS AE+ +V
Sbjct: 66 RQKGTGRARAGSSRSPLWRGGGVIFGPKPRSYSTKMNRKERRLALRTAFAS--RAEDLVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F RPKTK+ +EAM RWG++ K ++ + + + S+RN+ LK++ L
Sbjct: 124 VEDFGDNLSRPKTKDLLEAMGRWGVNADSKTLLILADKHDTIYLSARNVEKLKLILASNL 183
Query: 236 NLFDILDAETLVLTPSTV 253
N++D+L A+ +V T S +
Sbjct: 184 NVYDLLAADQIVATQSAI 201
>gi|56751875|ref|YP_172576.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 6301]
gi|81301040|ref|YP_401248.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 7942]
gi|3122743|sp|O24690.1|RL4_SYNP6 RecName: Full=50S ribosomal protein L4
gi|109893647|sp|Q31L08.1|RL4_SYNE7 RecName: Full=50S ribosomal protein L4
gi|2446891|dbj|BAA22450.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 6301]
gi|56686834|dbj|BAD80056.1| 50S ribosomal protein L4 [Synechococcus elongatus PCC 6301]
gi|81169921|gb|ABB58261.1| LSU ribosomal protein L4P [Synechococcus elongatus PCC 7942]
Length = 210
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G+ G ++L+ A ++A A+VHRALI + N R+GT ++ TR EVRGGGRKP+
Sbjct: 6 IQDWQGQTAGNITVELRVAKEESAAAIVHRALIRQLANARQGTHASKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TA+ S +A + +V
Sbjct: 66 KQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSVKMNRKERRLALRTALISRSA--DLVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+EF + RPKT++ EA+ RWG++P K + + +NVE S RN+ +K++T L
Sbjct: 124 VQEFADQISRPKTRDVAEALTRWGVEPGVKVLLITADRDQNVELSVRNLPNVKLITATNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A+ +V T + ++ + YG
Sbjct: 184 NIFDLLNADRIVSTSAALEKIQEVYG 209
>gi|334120608|ref|ZP_08494687.1| ribosomal protein L4/L1e [Microcoleus vaginatus FGP-2]
gi|428320017|ref|YP_007117899.1| ribosomal protein L4/L1e [Oscillatoria nigro-viridis PCC 7112]
gi|333456210|gb|EGK84845.1| ribosomal protein L4/L1e [Microcoleus vaginatus FGP-2]
gi|428243697|gb|AFZ09483.1| ribosomal protein L4/L1e [Oscillatoria nigro-viridis PCC 7112]
Length = 210
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 140/206 (67%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GET L+L+ A + A +VHRAL + N R+G A T TR EVRGGGRKP+
Sbjct: 6 VRNWQGEEVGETTLELRVAKEENASHIVHRALTRQLNNARQGNACTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+NKKE+RLA+ TA S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFEVKMNKKERRLALRTAFQS--RTEDIIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF +F RPK+KE + A+ RWG++P K ++ E NV S RNI + ++ +L
Sbjct: 124 VEEFAEQFPRPKSKELLSAISRWGIEPDTKVLLILPEPQPNVYLSGRNIELVNVILATSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L A+ +++T + + + YG
Sbjct: 184 NVYDVLAADKIIVTSTAIAKIQEIYG 209
>gi|332712168|ref|ZP_08432096.1| LSU ribosomal protein L4P [Moorea producens 3L]
gi|332348974|gb|EGJ28586.1| LSU ribosomal protein L4P [Moorea producens 3L]
Length = 210
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 137/198 (69%), Gaps = 2/198 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++G+ L ++ A + A +VHR+L+ M N R+G A T TR EVRGGGRKP+
Sbjct: 6 VRNWQGEEVGQATLQMRVAKEENAAHIVHRSLVRQMANARQGNACTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TA S AE+ IV
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTAFMS--RAEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ + A+ RWG++P+ K ++ + E V S RN+ T+K++ L
Sbjct: 124 VEEFTEQLPRPKTKDLVAAIGRWGIEPESKVLLILAQPEEKVYLSVRNLATVKLIYATNL 183
Query: 236 NLFDILDAETLVLTPSTV 253
N +DIL A+ +V T + +
Sbjct: 184 NTYDILAADKIVTTNTAL 201
>gi|428213107|ref|YP_007086251.1| 50S ribosomal protein L4 [Oscillatoria acuminata PCC 6304]
gi|428001488|gb|AFY82331.1| LSU ribosomal protein L4P [Oscillatoria acuminata PCC 6304]
Length = 210
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++ E +DL+ A+ + A+ ++HRA+ + R+GTAST TR EVRGGGRKP+
Sbjct: 6 VRNWEGEQVAEASIDLRVASEENAKHILHRAVTRQLNQGRQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA+ S +E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYDVKMNRKERRLALRTALIS--RSEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF K RPKTK+ + A+ RWG++P K +V + +NV S+RN+ +K++ L
Sbjct: 124 VEEFADKLPRPKTKDLLSAIARWGVEPDSKVLLIVDQRDDNVYLSARNVENIKLIAVNQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D++ A+ +V T + + + YG
Sbjct: 184 NVYDLVAADKIVTTAAALAKVQEVYG 209
>gi|424513595|emb|CCO66217.1| 50S ribosomal protein L4 [Bathycoccus prasinos]
Length = 262
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 3/212 (1%)
Query: 51 ASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
A+ + + F G GE LDLK A + A+ +VH+ ++ QN RRGTASTLT+ EVRGG
Sbjct: 46 AASVGKVKFDGSSNGEANLDLKVARNEVAKGIVHKYVVMVRQNARRGTASTLTKSEVRGG 105
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKPY QK TG AR GS R+PL PGGGV FGPKP+DWSIK+NKKE+RLA++TAI SAA++
Sbjct: 106 GRKPYKQKGTGNARLGSKRSPLLPGGGVTFGPKPKDWSIKMNKKERRLAMATAIQSAASS 165
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKM 229
IVV+ + PK+K F +A++ WG++ + T+++ + + VE ++RN+ +
Sbjct: 166 --MIVVDGINSGVTVPKSKAFQDALKSWGVNVNDEKTYVITKDAPKEVELATRNMARVVH 223
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++D+L+A+ +V+ + + +LN YG
Sbjct: 224 ADITKLNVYDVLNADKVVVDEAALGYLNDFYG 255
>gi|32307492|gb|AAP79151.1| ribosomal protein rpL4 [Bigelowiella natans]
Length = 335
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 148/222 (66%), Gaps = 5/222 (2%)
Query: 43 PLIVSSQLASP--LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTAS 100
P S +A P L + +F G+ +G + LK A P+TA+ +VHR L+ + R GTAS
Sbjct: 101 PYKGKSIMADPVKLEVKNFDGQVVGSDDMSLKVARPETAKGLVHRYLMYARNSMRAGTAS 160
Query: 101 TLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAI 160
T T+ EVRGGG+KPY QKKTG AR+GS RTPL+PGGG++FGPKPRDWS+ +N+KE+R+A+
Sbjct: 161 TKTKSEVRGGGKKPYQQKKTGNARQGSRRTPLKPGGGIIFGPKPRDWSVDMNQKERRIAM 220
Query: 161 STAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEK 219
+TA+ SA++ + I+VE+ DGKFE PKTK + + R G P ++ LV+E + N
Sbjct: 221 ATALQSASS--DVILVEDLDGKFESPKTKNMADFLDRVGAKPSEEKVLLVVEGQKRNALL 278
Query: 220 SSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
S+RNI LK+ P +L + D+L A+ +++ + + +G
Sbjct: 279 SARNIDKLKINKPTSLRIIDVLGADKIIMEKKAFETMKNIFG 320
>gi|427417953|ref|ZP_18908136.1| 50S ribosomal protein L4, bacterial/organelle [Leptolyngbya sp. PCC
7375]
gi|425760666|gb|EKV01519.1| 50S ribosomal protein L4, bacterial/organelle [Leptolyngbya sp. PCC
7375]
Length = 210
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 134/205 (65%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G G LDL A D A +VHRA++ M N R+GT S+ TR EVRGGGRKP+
Sbjct: 6 IKDWQGADAGTATLDLSVAKEDNAIHIVHRAIVRQMHNSRQGTLSSKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKPRD+ +K+N+KE+RLA+ TA S ++ +V
Sbjct: 66 RQKGTGRARAGSNRSPLWRGGGVIFGPKPRDFEVKMNRKERRLALRTAFQS--RVDDMVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + PKTKE + A+ RWG+D +QK + E +E V +S RN+ +K++ L
Sbjct: 124 VENFADQLSAPKTKEVLSALERWGVDVEQKVLMITAEKNEVVYRSVRNVANIKLILATNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N +DI+ A+ LV+T + ++ + Y
Sbjct: 184 NAYDIVLADKLVVTATALEKIQEVY 208
>gi|443321138|ref|ZP_21050202.1| 50S ribosomal protein L4, bacterial/organelle [Gloeocapsa sp. PCC
73106]
gi|442789166|gb|ELR98835.1| 50S ribosomal protein L4, bacterial/organelle [Gloeocapsa sp. PCC
73106]
Length = 209
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 138/205 (67%), Gaps = 2/205 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE +GE L+LK+A + A +VHRAL+ + + R+G AST TR EVRGGGRKP+
Sbjct: 6 IKNWQGETVGEQTLELKTAKVENASHIVHRALVRQLAHARQGNASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV FGPKPRD+ +K+N+KE++LA+ TA+ S + + IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVTFGPKPRDYELKMNRKERKLALRTALDSRSV--DIIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE F + +PKTKE A+ RWG++ + K ++ E++ENV S+RNI LKML L
Sbjct: 124 VENFSEQLPKPKTKELTSALTRWGVEGQPKVLMILSEIAENVALSARNISYLKMLKASNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N+ D+L A +++T + + Y
Sbjct: 184 NIQDLLTAGKIIITSEALAQIQELY 208
>gi|123966972|ref|YP_001012053.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9515]
gi|166199843|sp|A2BYT5.1|RL4_PROM5 RecName: Full=50S ribosomal protein L4
gi|123201338|gb|ABM72946.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9515]
Length = 210
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 141/209 (67%), Gaps = 2/209 (0%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L L + G+K+G+ +DLK A ++ ++HRA++ + N+R+GTASTLTR EVRGGG
Sbjct: 2 TTLETLKWDGKKVGKVSIDLKVAKETSSSDLIHRAVLRQLANQRQGTASTLTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS RTPLRPGGGV+FGPKPR +++ +N+KE+RLA+ TA+ S +
Sbjct: 62 RKPYKQKGTGRARQGSIRTPLRPGGGVIFGPKPRSYNLDMNRKERRLALRTALMS--RVD 119
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ VE+F +PKT E I + R G++ +K ++ SE ++KS NI +K++
Sbjct: 120 DIKAVEDFGSTLNQPKTSEIINGLSRLGIEKTEKVLVILDSPSEVIKKSINNIAKVKLIA 179
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FDIL+A LV+ S ++ + Y
Sbjct: 180 ADQLNVFDILNANKLVIGQSAINKIQEVY 208
>gi|87300912|ref|ZP_01083754.1| 50S ribosomal protein L4 [Synechococcus sp. WH 5701]
gi|87284783|gb|EAQ76735.1| 50S ribosomal protein L4 [Synechococcus sp. WH 5701]
Length = 211
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ GE LDLK A +A +VHRA++ + N R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGEASLDLKVAKKSSAADLVHRAVVRQLANARQGTASTLTRAEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGGV+FGPKPR +++ +N+KE+RLA+ TA+ S AA + +V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGVIFGPKPRSYTLAMNRKERRLALRTALISRAA--DILV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F E PKTKE + A+ RW + K ++ + V +S RN+ +K++ L
Sbjct: 124 VKGFAADLEVPKTKEIVAALDRWDVPAGSKVLLVLDAPGDVVRRSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL+ + + YG
Sbjct: 184 NVFDLLHANVLVLSEEALAKIQEIYG 209
>gi|409991359|ref|ZP_11274627.1| 50S ribosomal protein L4 [Arthrospira platensis str. Paraca]
gi|291567785|dbj|BAI90057.1| 50S ribosomal protein L4 [Arthrospira platensis NIES-39]
gi|409937773|gb|EKN79169.1| 50S ribosomal protein L4 [Arthrospira platensis str. Paraca]
Length = 210
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 138/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I ++ GE++G+T L+LK A + A +VHRAL+ R+GTAST TR EVRGGGRKP+
Sbjct: 6 IRNWDGEEVGQTTLELKVAKEENASHIVHRALVRQQAAARQGTASTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TA S ++ +V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYSVKMNRKERRLALRTAFQS--RVDDIVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEEF + RPKTK+ A+ RWG+ K ++ E ENV S RN+ +++ +L
Sbjct: 124 VEEFVTQLPRPKTKDLTAALERWGVSSSAKVLLVLPEKQENVYLSGRNVEKMRICLADSL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L A+ +V T + + + YG
Sbjct: 184 NVYDVLAADKIVTTANALAKIQEVYG 209
>gi|254421500|ref|ZP_05035218.1| ribosomal protein L4/L1 family [Synechococcus sp. PCC 7335]
gi|196188989|gb|EDX83953.1| ribosomal protein L4/L1 family [Synechococcus sp. PCC 7335]
Length = 210
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 139/206 (67%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE+ G L+LK A+ + A +VHRAL+ + N R+GTAST TR EVRGGGRKP+
Sbjct: 6 VKNWQGEEAGSVSLELKVASEENASHIVHRALVRQINNGRQGTASTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD++ K+N+KE+RLA+ TA S A V
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYTTKMNRKERRLALRTAFQS--RANEMTV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F + +PKTKE + A+ RW +D K + E ++NV S RN+ ++M+ L
Sbjct: 124 VKDFAAELTQPKTKEALAALTRWEIDASAKVLMVFSERNDNVYLSLRNVPNVRMIDATNL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++DIL A++LV+T S ++ + YG
Sbjct: 184 NIYDILHADSLVVTESALEKIQEVYG 209
>gi|284929562|ref|YP_003422084.1| 50S ribosomal protein L4P [cyanobacterium UCYN-A]
gi|284810006|gb|ADB95703.1| LSU ribosomal protein L4P [cyanobacterium UCYN-A]
Length = 210
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
++ GE +G+ L+LK A +++ ++HRA++ + N R+G A + TR EVRGGGRKP+ Q
Sbjct: 8 NWQGELVGQVTLNLKVAKEESSAHLLHRAVVRHLANARQGNACSKTRAEVRGGGRKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGGV+FGPKPRD+S+K+N+KE+RLA+ TAI+S E+ I+V+
Sbjct: 68 KGTGRARAGSIRSPLWRGGGVIFGPKPRDFSLKMNRKERRLALRTAISS--RIEDLIIVK 125
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
+F +F PKTK F A+ RWG++ ++K +++E N+ S RN+ +K+L +LN+
Sbjct: 126 DFIEQFPDPKTKHFTAALTRWGVESRKKVALILLETDNNIYLSVRNLSYVKILRADSLNI 185
Query: 238 FDILDAETLVLT 249
+D+L+A+ +V+T
Sbjct: 186 YDLLNADKIVMT 197
>gi|428217340|ref|YP_007101805.1| 50S ribosomal protein L4 [Pseudanabaena sp. PCC 7367]
gi|427989122|gb|AFY69377.1| LSU ribosomal protein L4P [Pseudanabaena sp. PCC 7367]
Length = 220
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 140/206 (67%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ +TG ++GE L LK A TA +VHRA++ + N R+G AST TR EVRGGGRKP+
Sbjct: 4 VIDWTGNQVGEVELQLKVAKESTAADLVHRAVVRQLNNARQGNASTKTRAEVRGGGRKPW 63
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R+PL GGGV+FGPKP+D+++ +N+KE+RLA+ TA S E+ +V
Sbjct: 64 RQKGTGRARAGSSRSPLWSGGGVIFGPKPKDYNLNMNRKERRLALRTAFQS--RLEDMVV 121
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F G +PKT E +A+ RWG++P QK ++ + E V S+RN+ LK+ L
Sbjct: 122 VEDFIGNLPQPKTAELAKALERWGVEPGQKTLLIIDQRQEMVYLSARNMPKLKLTVADQL 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
++++I+ A+ +V+T ++ + YG
Sbjct: 182 SVYNIVMADKIVVTAPALEKIKAVYG 207
>gi|427714157|ref|YP_007062781.1| 50S ribosomal protein L4 [Synechococcus sp. PCC 6312]
gi|427378286|gb|AFY62238.1| LSU ribosomal protein L4P [Synechococcus sp. PCC 6312]
Length = 210
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 133/203 (65%), Gaps = 2/203 (0%)
Query: 59 FTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQK 118
+ G G L+L A TA ++HRA++ + N R+GT ST TR EV GGGRKP+ QK
Sbjct: 9 WQGTSAGAAELELAVAKETTASHILHRAVVRQLANARQGTVSTKTRAEVSGGGRKPWKQK 68
Query: 119 KTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEE 178
TGRAR GSNR+PL GGGV+FGPKPRD+S K+N+KE+RLA+ TA+ S +E IVV++
Sbjct: 69 GTGRARAGSNRSPLWRGGGVIFGPKPRDYSQKMNRKERRLALRTALMS--RSEALIVVQD 126
Query: 179 FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLF 238
F + RPKTKE I A+ RWG++ K + E EN+ S+RN+ LK++ LN+F
Sbjct: 127 FAEQLPRPKTKELINALTRWGVETGSKVLLITAERQENIYLSARNVPRLKLIAADQLNVF 186
Query: 239 DILDAETLVLTPSTVDFLNGRYG 261
D+L A+++V T + + YG
Sbjct: 187 DLLHADSIVATSEAIAKIQEVYG 209
>gi|428768920|ref|YP_007160710.1| 50S ribosomal protein L4 [Cyanobacterium aponinum PCC 10605]
gi|428683199|gb|AFZ52666.1| LSU ribosomal protein L4P [Cyanobacterium aponinum PCC 10605]
Length = 211
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 140/206 (67%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE++GET L++K A + A +VHRAL+ + N+R+GT S+ TR EVRGGGRKP+
Sbjct: 6 VKNWQGEQVGETTLEMKVAKAENAEHIVHRALVRQLHNQRQGTVSSKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+N+KE++LAI TA E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGGVIFGPKPRDFDMKMNRKERKLAIRTAFMD--RVEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTLKMLTPRT 234
VE FD + PKTKE + A+ RWG++ K +V + + EN+ S+RN+ T+KM+
Sbjct: 124 VENFD-QIATPKTKEVVSALTRWGVEEDAKVLIVVNDSIPENLYLSARNLPTVKMIKHDC 182
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
LN++DIL A+ +V T + + Y
Sbjct: 183 LNVYDILYADKIVATSEAITKIQEVY 208
>gi|159904218|ref|YP_001551562.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9211]
gi|226730707|sp|A9BCP6.1|RL4_PROM4 RecName: Full=50S ribosomal protein L4
gi|159889394|gb|ABX09608.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9211]
Length = 211
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 141/206 (68%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VLDWQGQEAGKATLDLKVAKETTAVDLIHRAVVRQQAHSRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG++FGPKPR +S+ +N+KE+RLA+ TA+ A + ++
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIIFGPKPRSFSLGMNRKERRLALRTAL--MARINDLMI 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F + PKT+E +EA+ R+G+ K ++ + SE + +S RNI +K++ L
Sbjct: 124 VQDFGTALKVPKTREIVEALSRFGIADDAKVLIILAQPSEIIIRSVRNIERVKVIGADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A +LV+ + + YG
Sbjct: 184 NVFDLLNANSLVIGEKALSTIKEVYG 209
>gi|171700382|gb|ACB53363.1| 50S ribosomal protein L4 [Cyanothece sp. ATCC 51142]
Length = 188
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
Query: 74 AAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLR 133
A +TA ++HRA++ + N R+G AST TR EVRGGGRKP+ QK TGRAR GS R+PL
Sbjct: 2 AKDETASHLLHRAVVRHLANARQGNASTKTRAEVRGGGRKPWRQKGTGRARAGSIRSPLW 61
Query: 134 PGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIE 193
GGGV+FGPKPRD+S+K+N+KE+RLA+ TAI S E+ IVVE F + +PKTKE
Sbjct: 62 RGGGVIFGPKPRDFSLKMNRKERRLALRTAIGS--RVEDMIVVENFAEQLPQPKTKELAS 119
Query: 194 AMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
A+ RWG++P QK +++E N+ S+RN+ +K+L +LN++D+LDA+ +V+T +
Sbjct: 120 ALTRWGVEPTQKVALVLVETDANIYLSARNLCHVKILRADSLNVYDLLDADKIVITSEAI 179
Query: 254 DFLNGRY 260
+ Y
Sbjct: 180 SKIQEVY 186
>gi|33862113|ref|NP_893674.1| 50S ribosomal protein L4 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|46577194|sp|Q7UZU8.1|RL4_PROMP RecName: Full=50S ribosomal protein L4
gi|33634331|emb|CAE20016.1| 50S ribosomal protein L4 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 210
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 141/209 (67%), Gaps = 2/209 (0%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L L + G+K G+ +DLK A ++ ++HRA++ + NKR+GTASTLTR EVRGGG
Sbjct: 2 TTLETLKWDGKKAGKVSIDLKVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS RTPLRPGGGV+FGPKPR +++ +N+KE+RLA+ TA+ S +
Sbjct: 62 RKPYKQKGTGRARQGSIRTPLRPGGGVIFGPKPRSYNLDMNRKERRLALRTALMSRISDF 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
T VE+F ++PKT E I + R G++ +K ++ S+ ++KS N+ +K++
Sbjct: 122 KT--VEDFGSTLDQPKTSEIINGLSRLGIEKTEKVLVILDNPSDVIKKSINNLEKVKLIA 179
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FDIL+A LV+ S ++ + Y
Sbjct: 180 ADQLNVFDILNANKLVIGQSAINKIQEVY 208
>gi|124026707|ref|YP_001015822.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. NATL1A]
gi|123961775|gb|ABM76558.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. NATL1A]
Length = 212
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+ + +L + G++ GE+ +DLK+A +A ++HRA++ + R+GTASTLTR EVRG
Sbjct: 1 MMTNCTVLDWQGKEAGESSIDLKTAKESSAADLLHRAVLRQQAHSRQGTASTLTRSEVRG 60
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKPY QK TGRAR+GS RTPLRPGGG++FGPKPR +++++N+KE+RLA+ TA+ S +
Sbjct: 61 GGRKPYKQKGTGRARQGSIRTPLRPGGGIIFGPKPRKYNLEMNRKERRLALRTALMSRIS 120
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
+ ++++F K E PKT E + ++R G+D K ++ + SE +++S +N+ +K+
Sbjct: 121 --DAKIIKDFGSKLEVPKTSEIVALLKRVGIDSDVKILIILNKPSEIIKRSIKNLEKVKL 178
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
++ LN+FD+L+A +LV+ + + YG
Sbjct: 179 ISADQLNVFDLLNANSLVIGEDALSTIKEVYG 210
>gi|33866600|ref|NP_898159.1| 50S ribosomal protein L4 [Synechococcus sp. WH 8102]
gi|46577186|sp|Q7U4J9.1|RL4_SYNPX RecName: Full=50S ribosomal protein L4
gi|33633378|emb|CAE08583.1| 50S ribosomal protein L4 [Synechococcus sp. WH 8102]
Length = 211
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 IRDWQGKEAGKATLDLKVAKETTANDLMHRAVLRQQAHARQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG+VFGPKPR +++ +N+KE+RLA+ TA+ A E+ V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIVFGPKPRTYNLAMNRKERRLALRTAL--MARVEDVTV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKTKE +A+ R G+ K ++ E S+ V +S RN+ +K++ L
Sbjct: 124 VKDFGTSLEAPKTKEITDALGRLGIAADAKVLIVLTEPSDVVRRSVRNLEKVKLIAANQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL + + YG
Sbjct: 184 NVFDLLHANALVLGEDALATIQEVYG 209
>gi|307104743|gb|EFN52995.1| hypothetical protein CHLNCDRAFT_49059 [Chlorella variabilis]
Length = 222
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 144/221 (65%), Gaps = 6/221 (2%)
Query: 44 LIVSSQLASP--LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTAS 100
++ ++ +A+P LP+ G +G + + L+ A DTA +VHR L+ QN R+G AS
Sbjct: 1 MVSAATVAAPVALPVKKLDGSDVGSSASISLRVADEDTANGLVHRYLVMVRQNARQGNAS 60
Query: 101 TLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAI 160
TLTR EVRGGGRKPY QK +G ARRGS R+PL PGGG+ FGPKPRDWSI +NKKE++LA
Sbjct: 61 TLTRSEVRGGGRKPYKQKGSGNARRGSRRSPLMPGGGISFGPKPRDWSISMNKKERKLAC 120
Query: 161 STAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220
+TA+ SAAA + +V ++F G E TK + ++ G+ +K +V E +E + S
Sbjct: 121 ATALQSAAA--DMLVCDDF-GALEAVSTKGLVASLAAMGVQEGEKVLLVVNEANEKLYLS 177
Query: 221 SRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
RN+ TL + T + ++D+L+A+ +V+ S + +LN +G
Sbjct: 178 GRNLPTLAINTANAVQVYDVLNADRIVVEQSALAYLNEWFG 218
>gi|302851169|ref|XP_002957109.1| plastid/chloroplast ribosomal protein L4 [Volvox carteri f.
nagariensis]
gi|300257516|gb|EFJ41763.1| plastid/chloroplast ribosomal protein L4 [Volvox carteri f.
nagariensis]
Length = 246
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 148/237 (62%), Gaps = 7/237 (2%)
Query: 28 IQLAKPNSLINLPPKPLIVSSQLASP--LPILSFTGEKIGETYLDLKSAAPDTARAVVHR 85
+Q KP + + P+ ++V+S +A P +P + G + G L LK A ++A+ +VHR
Sbjct: 6 LQAFKP-ACVGRQPRLVVVNSAIAPPATIPYKAADGSEKGNQQLALK-VAEESAKGLVHR 63
Query: 86 ALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR 145
L+ QN R+GTAST TR EVRGGG+KPY+QK TG ARRGS+ +PL PGGGV FGPKP+
Sbjct: 64 YLVLVQQNARQGTASTKTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFPGGGVTFGPKPK 123
Query: 146 DWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQK 205
DW I +NKKEKRLA++TA+ SAAA + IVVE DGK + KTKE + + + G D +
Sbjct: 124 DWKISMNKKEKRLALATALQSAAA--DMIVVESLDGKLKETKTKEMVALLEKLGADVMSR 181
Query: 206 ATFLVM-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
L+ + ++ + RNI L T +LN+ DIL A+ +++ + + G
Sbjct: 182 KVLLITKDARPDLHLAGRNIAKLTFNTASSLNVLDILHADHIIVEDEALAHIQATLG 238
>gi|126697086|ref|YP_001091972.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9301]
gi|166199841|sp|A3PF46.1|RL4_PROM0 RecName: Full=50S ribosomal protein L4
gi|126544129|gb|ABO18371.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9301]
Length = 210
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L L + G+K G+ LDL A ++ ++HRA++ + NKR+GTASTLTR EVRGGG
Sbjct: 2 TTLETLKWDGKKSGKVSLDLAVAKKTSSADLIHRAVLRQLANKRQGTASTLTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ S +
Sbjct: 62 RKPYKQKGTGRARQGSIRTPLRPGGGIIFGPKPRSYNLDMNRKERRLALRTALMSRVS-- 119
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ VE+F ++PKT + I + R G+ +K ++ S+ ++KS NI +K++
Sbjct: 120 DIKAVEDFGSTLKQPKTSDIINGLARLGIQKTEKVLVILDSPSDIIKKSINNIEKVKLIA 179
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FDIL+A LV+ S +D + Y
Sbjct: 180 ADQLNVFDILNANKLVIGQSAIDKIQEVY 208
>gi|72382966|ref|YP_292321.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. NATL2A]
gi|109893619|sp|Q46IR0.1|RL4_PROMT RecName: Full=50S ribosomal protein L4
gi|72002816|gb|AAZ58618.1| LSU ribosomal protein L4P [Prochlorococcus marinus str. NATL2A]
Length = 211
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 144/206 (69%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L + G++ GE+ +DLK+A +A ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VLDWQGKEAGESSIDLKTAKESSAADLLHRAVLRQQAHSRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG++FGPKPR +++++N+KE+RLA+ TA+ S + +
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIIFGPKPRKYNLEMNRKERRLALRTALMSRIP--DAKI 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++F K E PKT E + ++R G+D K ++ + SE +++S +N+ +K+++ L
Sbjct: 124 IKDFGSKLEVPKTSEIVALLKRVGIDSDVKILIILNKPSEIIKRSIKNLEKVKLISADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A +LV+ + + YG
Sbjct: 184 NVFDLLNANSLVIGEDALSTIKEVYG 209
>gi|123969296|ref|YP_001010154.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. AS9601]
gi|166199844|sp|A2BTD6.1|RL4_PROMS RecName: Full=50S ribosomal protein L4
gi|123199406|gb|ABM71047.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. AS9601]
Length = 210
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L L + G+K G+ LDL A ++ ++HRA++ + NKR+GTASTLTR EVRGGG
Sbjct: 2 TTLETLKWDGKKSGKVSLDLAVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ S +
Sbjct: 62 RKPYKQKGTGRARQGSIRTPLRPGGGIIFGPKPRSYNLDMNRKERRLALRTALMSRVS-- 119
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ VE+F ++PKT + I + R G+ +K ++ S+ ++KS NI +K++
Sbjct: 120 DMKAVEDFGSTLKQPKTSDIINGLARLGIQKTEKVLVILDSPSDIIKKSINNIEKVKLIA 179
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FDIL+A LV+ S +D + Y
Sbjct: 180 ADQLNVFDILNANKLVIGQSAIDKIQEVY 208
>gi|37519655|ref|NP_923032.1| 50S ribosomal protein L4 [Gloeobacter violaceus PCC 7421]
gi|46577179|sp|Q7NPG9.1|RL4_GLOVI RecName: Full=50S ribosomal protein L4
gi|35210646|dbj|BAC88027.1| 50S ribosomal protein L4 [Gloeobacter violaceus PCC 7421]
Length = 213
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 137/207 (66%), Gaps = 3/207 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G GE LDL A+ TA VV+ A M N R+GTASTLTRGEVRGGGRKP+
Sbjct: 6 IKDWQGNATGEVDLDLPVASAATASHVVYLAFKRQMVNSRQGTASTLTRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGV+FGPKPRD+ IK+N+KE+RLA+ TA+ S E+ IV
Sbjct: 66 KQKGTGRARAGSIRSPLWRKGGVIFGPKPRDFEIKMNRKERRLALRTALQS--RVEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKMLTPRT 234
V+EF+G+ PKT+E ++A RWG+D ++ L++ E N S+RN+ +K++T
Sbjct: 124 VDEFEGQLAAPKTRELVQAFERWGVDMASQSILLILRERQTNTYLSARNLPNVKVITAGN 183
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+ D+L + +V+T ++ + YG
Sbjct: 184 LNVRDLLATDWIVVTGPALELIKETYG 210
>gi|254525728|ref|ZP_05137780.1| ribosomal protein, L4/L1 family [Prochlorococcus marinus str. MIT
9202]
gi|221537152|gb|EEE39605.1| ribosomal protein, L4/L1 family [Prochlorococcus marinus str. MIT
9202]
Length = 210
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L L + G+K G+ LDL A ++ ++HRA++ + NKR+GTASTLTR EVRGGG
Sbjct: 2 TTLETLKWDGKKSGKVTLDLTVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ S +
Sbjct: 62 RKPYKQKGTGRARQGSIRTPLRPGGGIIFGPKPRSYNLDMNRKERRLALRTALMSRVS-- 119
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ VE+F ++PKT + + + R G+ +K ++ S+ ++KS NI +K++
Sbjct: 120 DMKAVEDFGSTLKQPKTSDIVNGLARLGIQKNEKVLVILDSPSDVIKKSINNIEKVKLIA 179
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FDIL+A LV+ S +D + Y
Sbjct: 180 ADQLNVFDILNANKLVIGQSAIDKIQEVY 208
>gi|78780034|ref|YP_398146.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9312]
gi|109893618|sp|Q318I5.1|RL4_PROM9 RecName: Full=50S ribosomal protein L4
gi|78713533|gb|ABB50710.1| LSU ribosomal protein L4P [Prochlorococcus marinus str. MIT 9312]
Length = 210
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 137/204 (67%), Gaps = 2/204 (0%)
Query: 57 LSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYS 116
L + G+K GE LDL A ++ ++HRA++ + NKR+GTASTLTR EVRGGGRKPY
Sbjct: 7 LKWDGKKSGEVKLDLTVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEVRGGGRKPYK 66
Query: 117 QKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVV 176
QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ S + + V
Sbjct: 67 QKGTGRARQGSIRTPLRPGGGIIFGPKPRSYNLDMNRKERRLALRTALMSRIS--DVKAV 124
Query: 177 EEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLN 236
E+F ++PKT + I + R G+ +K ++ SE ++KS NI +K++ LN
Sbjct: 125 EDFGSTLKQPKTSDIINGLTRLGIQKTEKVLVILDSPSEVIKKSINNIEKVKLIAADQLN 184
Query: 237 LFDILDAETLVLTPSTVDFLNGRY 260
+FDIL+A LV+ S ++ + Y
Sbjct: 185 VFDILNANKLVIGQSAINKIKEVY 208
>gi|254430668|ref|ZP_05044371.1| ribosomal protein L4/L1 family [Cyanobium sp. PCC 7001]
gi|197625121|gb|EDY37680.1| ribosomal protein L4/L1 family [Cyanobium sp. PCC 7001]
Length = 211
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G++ G+ LDLK A +A +VHRA++ + + R+GTASTLTR EV GGGRKPY
Sbjct: 6 IRDWQGKEAGKADLDLKVAKESSATDLVHRAVVRQLAHARQGTASTLTRAEVAGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGGVVFGPKPR +++ +N+KE+RLA+ TA+ S E+ V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGVVFGPKPRSYALAMNRKERRLALRTALMS--RVEDITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F + PKTKE A+ R G++ K ++ SE V KS RN+ +K++ L
Sbjct: 124 VKGFGAGLDTPKTKEITAALTRLGIEAGAKVLVILDNASEAVRKSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LV++ + + YG
Sbjct: 184 NVFDLLHANKLVVSEEALAKIQEVYG 209
>gi|157414162|ref|YP_001485028.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9215]
gi|166990951|sp|A8G761.1|RL4_PROM2 RecName: Full=50S ribosomal protein L4
gi|157388737|gb|ABV51442.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9215]
Length = 210
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L L + G+K G+ LDL A ++ ++HRA++ + NKR+GTASTLTR EVRGGG
Sbjct: 2 TTLETLKWDGKKSGKVTLDLTVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ S +
Sbjct: 62 RKPYKQKGTGRARQGSIRTPLRPGGGIIFGPKPRSYNLDMNRKERRLALRTALMSRVS-- 119
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ VE+F ++PKT + I + R G+ +K ++ S+ ++KS NI +K++
Sbjct: 120 DMKAVEDFGSTLKQPKTSDIINGLARLGIQKNEKVLVILDSPSDVIKKSINNIEKVKLIA 179
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN+FDIL+A L++ S +D + Y
Sbjct: 180 ADQLNVFDILNANKLLIGQSAIDKIQEVY 208
>gi|317968818|ref|ZP_07970208.1| 50S ribosomal protein L4 [Synechococcus sp. CB0205]
Length = 211
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A +A +VHRA++ + + R+GTASTLTR EV GGGRKPY
Sbjct: 6 VRDWQGKEAGKASLDLKVAKESSANDLVHRAVVRQLAHARQGTASTLTRAEVAGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGGVVFGPKPR +++ +N+KE+RLA+ TA+ S AA + V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGVVFGPKPRTYNLAMNRKERRLALRTALMSRAA--DITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F E PKTKE A+ R+G+ K ++ SE V +S RN+ +K++ L
Sbjct: 124 VKGFASGLETPKTKEITAALSRFGIAAGSKVLVVLDAPSEVVRRSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A +LV++ + + YG
Sbjct: 184 NVFDLLHANSLVVSEEALAKIQEVYG 209
>gi|88807885|ref|ZP_01123396.1| 50S ribosomal protein L4 [Synechococcus sp. WH 7805]
gi|88787924|gb|EAR19080.1| 50S ribosomal protein L4 [Synechococcus sp. WH 7805]
Length = 211
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGKASLDLKVAKETTALDLMHRAVLRQQAHSRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG+VFGPKPR +++ +N+KE+RLA+ TA+ A ++ V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIVFGPKPRTYNLAMNRKERRLALRTAL--MARIDDVTV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKT+E +A+ R G++ K +V SE + +S RN+ +K++ L
Sbjct: 124 VKDFGASLEAPKTREITDALGRLGIEADSKVLIVVGNPSEVLRRSVRNLEKVKLIAANQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL + + YG
Sbjct: 184 NVFDLLHANALVLGEEALATIQEVYG 209
>gi|116075766|ref|ZP_01473025.1| 50S ribosomal protein L4 [Synechococcus sp. RS9916]
gi|116067081|gb|EAU72836.1| 50S ribosomal protein L4 [Synechococcus sp. RS9916]
Length = 211
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 136/203 (66%), Gaps = 2/203 (0%)
Query: 59 FTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQK 118
+ G+ G+ L+LK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY QK
Sbjct: 9 WQGKDAGKASLELKVAKETTANDLMHRAVLRQQAHSRQGTASTLTRAEVRGGGRKPYKQK 68
Query: 119 KTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEE 178
TGRAR+GS RTPLRPGGG+VFGPKPR +++ +N+KE+RLA+ TA+ A E+ +VV++
Sbjct: 69 GTGRARQGSIRTPLRPGGGIVFGPKPRTYNLAMNRKERRLALRTAL--MARVEDLVVVKD 126
Query: 179 FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLF 238
F E PKT+E +A+ R G+ K ++ SE V +S RN+ +K++ LN+F
Sbjct: 127 FGTNLEAPKTREITDALGRLGIAADAKVLLVLTNPSEVVRRSVRNLEKVKLIAADQLNVF 186
Query: 239 DILDAETLVLTPSTVDFLNGRYG 261
D+L+A LV+ + + + YG
Sbjct: 187 DLLNANNLVVGETALATIQEVYG 209
>gi|148238769|ref|YP_001224156.1| 50S ribosomal protein L4 [Synechococcus sp. WH 7803]
gi|166199919|sp|A5GIU4.1|RL4_SYNPW RecName: Full=50S ribosomal protein L4
gi|147847308|emb|CAK22859.1| 50S ribosomal protein L4 [Synechococcus sp. WH 7803]
Length = 211
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKETGKASLDLKVAKETTALDLMHRAVLRQQAHTRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG+VFGPKPR +++ +N+KE+RLA+ TA+ A ++ V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIVFGPKPRSYNLAMNRKERRLALRTAL--MARIDDVTV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKT+E ++A+ R G++ K ++ SE + +S RN+ +K++ L
Sbjct: 124 VKDFGTSLEAPKTREIVDALGRLGIEADSKVLIVLGTPSEVLRRSVRNLEKVKLIAANQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL + + YG
Sbjct: 184 NVFDLLHANALVLGEEALATIQEVYG 209
>gi|352096520|ref|ZP_08957347.1| ribosomal protein L4/L1e [Synechococcus sp. WH 8016]
gi|351676170|gb|EHA59324.1| ribosomal protein L4/L1e [Synechococcus sp. WH 8016]
Length = 211
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 136/203 (66%), Gaps = 2/203 (0%)
Query: 59 FTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQK 118
+ G++ G+ LDLK A +A ++HRA++ + R+GTASTLTR EVRGGGRKPY QK
Sbjct: 9 WQGKEAGKASLDLKVAKETSALDLMHRAVLRQQAHSRQGTASTLTRSEVRGGGRKPYKQK 68
Query: 119 KTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEE 178
TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+R A+ TA+ A E+ +VV++
Sbjct: 69 GTGRARQGSVRTPLRPGGGIIFGPKPRSYNLAMNRKERRSALRTAL--MARIEDLVVVKD 126
Query: 179 FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLF 238
F PKTKE I+A+ R G+ K ++ SE V++S RN+ T+K++ LN+F
Sbjct: 127 FATTLTTPKTKEIIDALGRLGVSATSKVLIILTNPSEAVQRSIRNLETVKLIAADQLNVF 186
Query: 239 DILDAETLVLTPSTVDFLNGRYG 261
D+L A LV+ + + YG
Sbjct: 187 DLLHANKLVVGEDALAKIQEVYG 209
>gi|159478579|ref|XP_001697380.1| plastid ribosomal protein L4 [Chlamydomonas reinhardtii]
gi|28911891|gb|AAO53242.1| ribosomal protein L4 [Chlamydomonas reinhardtii]
gi|158274538|gb|EDP00320.1| plastid ribosomal protein L4 [Chlamydomonas reinhardtii]
Length = 243
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 47 SSQLASP--LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTR 104
+S +A+P +P + G G L LK A D+A+ +VHR L+ QN R+GTASTLTR
Sbjct: 22 ASAVAAPASIPYKAADGSSKGTQQLALK-VAEDSAKGLVHRYLVMVQQNARQGTASTLTR 80
Query: 105 GEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAI 164
EVRGGG+KPY+QK TG ARRGS+ +PL PGGGV FGPKP+DWSI +NKKE+RLA++TA+
Sbjct: 81 SEVRGGGKKPYAQKGTGNARRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATAL 140
Query: 165 ASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRN 223
SA A + IVVE GK + KTK + + + G + ++ L+ E +V + RN
Sbjct: 141 QSATA--DMIVVESLAGKLQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRN 198
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
I L M T +++FD+L+A+ +++ + + YG
Sbjct: 199 IAKLTMNTASAISVFDVLNADHIIIEDEALAHVQSFYG 236
>gi|427703070|ref|YP_007046292.1| 50S ribosomal protein L4 [Cyanobium gracile PCC 6307]
gi|427346238|gb|AFY28951.1| 50S ribosomal protein L4, bacterial/organelle [Cyanobium gracile
PCC 6307]
Length = 211
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + G++ G+ LDLK A +A ++HRA++ + + R+GTASTLTR EV GGGRKPY
Sbjct: 6 IRDWQGKESGKAPLDLKVAKETSANGLLHRAVVRQLAHARQGTASTLTRAEVAGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGGV+FGPKPR +++ +N+KE+RLA+ TA+ S A + V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGVIFGPKPRSYAVSMNRKERRLALRTALMSRVA--DITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F + PKTKE A+ R+G+D K ++ S+ V +S RN+ +K++ L
Sbjct: 124 VKGFAEGLDTPKTKEITAALARFGIDAGAKVLLILDGASDAVSRSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL+ + + YG
Sbjct: 184 NVFDLLHANKLVLSEEALAKIQEVYG 209
>gi|87124963|ref|ZP_01080810.1| 50S ribosomal protein L4 [Synechococcus sp. RS9917]
gi|86167283|gb|EAQ68543.1| 50S ribosomal protein L4 [Synechococcus sp. RS9917]
Length = 211
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKDAGKASLDLKVAKESTATDLMHRAVLRQQAHMRQGTASTLTRAEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG+VFGPKPR +++ +N+KE+RLA+ TA+ A E V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIVFGPKPRSYNLAMNRKERRLALRTAL--MARFEAITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F + PKT+E +A+ R G+ K ++ SE V +S RN+ +K++ L
Sbjct: 124 VKDFGASLDVPKTREISDALGRLGIAADSKVLIILSNPSEVVRRSVRNLDKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A+ LV+ + + YG
Sbjct: 184 NVFDLLNAQALVVGEDALATIQEVYG 209
>gi|33864000|ref|NP_895560.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9313]
gi|46577197|sp|Q7V541.1|RL4_PROMM RecName: Full=50S ribosomal protein L4
gi|33635584|emb|CAE21908.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9313]
Length = 211
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 138/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ L+LK + TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VHDWQGKEAGKASLELKVSKETTAVDLMHRAVLRQQAHSRQGTASTLTRAEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ A E+ IV
Sbjct: 66 KQKGTGRARQGTIRTPLRPGGGIIFGPKPRTYNLAMNRKERRLALRTAL--MARIEDVIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F + PKT+E +A+ R GL K ++ SE + +S RN+ +K++ L
Sbjct: 124 VKDFGNSLKVPKTREISDALIRLGLAADAKVLIILSTPSEIIRRSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A +LVL+ + + YG
Sbjct: 184 NVFDLLHANSLVLSEEALAKIQEVYG 209
>gi|260436231|ref|ZP_05790201.1| ribosomal protein, L4/L1 family [Synechococcus sp. WH 8109]
gi|260414105|gb|EEX07401.1| ribosomal protein, L4/L1 family [Synechococcus sp. WH 8109]
Length = 211
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGKATLDLKVAKETTAVDLMHRAVLRQQAHARQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPL+PGGG++FGPKPR +++ +N+KE+RLA+ TA+ A E+ V
Sbjct: 66 KQKGTGRARQGSIRTPLKPGGGIIFGPKPRTYNLAMNRKERRLALRTAL--MARIEDVTV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKT+E +A+ R G+ K ++ S+ V +S RN+ +K+++ L
Sbjct: 124 VKDFGASLEAPKTREITDALGRLGVAAGSKVLIVLTNPSDVVRRSVRNLEKVKLISADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL + + YG
Sbjct: 184 NVFDLLHANALVLGEEALATIQEVYG 209
>gi|86605865|ref|YP_474628.1| 50S ribosomal protein L4 [Synechococcus sp. JA-3-3Ab]
gi|109893645|sp|Q2JV82.1|RL4_SYNJA RecName: Full=50S ribosomal protein L4
gi|86554407|gb|ABC99365.1| ribosomal protein L4 [Synechococcus sp. JA-3-3Ab]
Length = 326
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE +G L LK A P+TA +++ AL M N R+G A T TR EVRGGGRKP+
Sbjct: 6 VKNWQGETVGSAELSLKVARPETASHILYLALRRQMTNARQGNAHTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGV+FGP+ R++++ +N+KE++LA+ TA+ S E+ IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRKGGVIFGPRKREYNLAMNRKERQLALRTALQS--RVEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F + PKT+ +A+ RWG+ Q A +V E SE VE++ RNI +K++ L
Sbjct: 124 VEDFQDQLNPPKTRAVAQALLRWGVMEDQSALLIVAERSEAVERAVRNIARVKLIGLDQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+ + +++T S ++ L R+G
Sbjct: 184 NVFDLLNVDWVLITTSALEKLKARWG 209
>gi|116072563|ref|ZP_01469829.1| 50S ribosomal protein L4 [Synechococcus sp. BL107]
gi|116064450|gb|EAU70210.1| 50S ribosomal protein L4 [Synechococcus sp. BL107]
Length = 211
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGKATLDLKVAKEATAVDLMHRAVLRQQAHMRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+R A+ TA+ A ++ V
Sbjct: 66 KQKGTGRARQGSVRTPLRPGGGIIFGPKPRSYNLAMNRKERRSALRTAL--MARIDDITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKT+E EA+ R G+ K ++ SE V +S RN+ +K+++ L
Sbjct: 124 VKDFGTSLEAPKTREITEALGRLGIAADTKVLIVLTNPSEMVRRSVRNLEKVKLISANHL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A +LV+ + + YG
Sbjct: 184 NVFDLLHANSLVVGEDALTTIQEVYG 209
>gi|78211927|ref|YP_380706.1| 50S ribosomal protein L4 [Synechococcus sp. CC9605]
gi|109893649|sp|Q3AMN1.1|RL4_SYNSC RecName: Full=50S ribosomal protein L4
gi|78196386|gb|ABB34151.1| 50S ribosomal protein L4 [Synechococcus sp. CC9605]
Length = 211
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGKATLDLKVAKETTAVDLMHRAVLRQQAHARQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPL+PGGG++FGPKPR +++ +N+KE+RLA+ TA+ A ++ V
Sbjct: 66 KQKGTGRARQGSIRTPLKPGGGIIFGPKPRTYNLAMNRKERRLALRTAL--MARIDDVTV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKT+E +A+ R G+ K ++ S+ V +S RN+ +K+++ L
Sbjct: 124 VQDFGASLEAPKTREITDALGRLGVAAGSKVLIVLTNPSDVVRRSVRNLEKVKLISADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LVL + + YG
Sbjct: 184 NVFDLLHANALVLGEEALATIQEVYG 209
>gi|124023996|ref|YP_001018303.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9303]
gi|166199842|sp|A2CC28.1|RL4_PROM3 RecName: Full=50S ribosomal protein L4
gi|123964282|gb|ABM79038.1| 50S ribosomal protein L4 [Prochlorococcus marinus str. MIT 9303]
Length = 211
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 138/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ L+LK + TA ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VHDWQGKEAGKASLELKVSKETTAVDLMHRAVLRQQAHSRQGTASTLTRAEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ A E+ IV
Sbjct: 66 KQKGTGRARQGTIRTPLRPGGGIIFGPKPRTYNLAMNRKERRLALRTAL--MARLEDVIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F + PKT+E +A+ R G+ K ++ SE + +S RN+ +K++ L
Sbjct: 124 VKDFGDSLKAPKTREISDALVRLGVAADAKVLIILSTPSEIIRRSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A +LVL+ + + YG
Sbjct: 184 NVFDLLHANSLVLSEEALAKIQEVYG 209
>gi|78185523|ref|YP_377957.1| 50S ribosomal protein L4 [Synechococcus sp. CC9902]
gi|109893648|sp|Q3AUW2.1|RL4_SYNS9 RecName: Full=50S ribosomal protein L4
gi|78169817|gb|ABB26914.1| LSU ribosomal protein L4P [Synechococcus sp. CC9902]
Length = 211
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A +A ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGKATLDLKVAKEASAVDLMHRAVLRQQAHMRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+R A+ TA+ A ++ V
Sbjct: 66 KQKGTGRARQGSVRTPLRPGGGIIFGPKPRSYNLAMNRKERRSALRTAL--MARIDDITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F E PKT+E EA+ R G+ K ++ SE V +S RN+ +K+++ L
Sbjct: 124 VKDFGTSLEAPKTREITEALGRLGIAADTKVLIVLTNPSEMVRRSVRNLDKVKLISANHL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A +LV+ + + YG
Sbjct: 184 NVFDLLHANSLVVGEDALTTIQEVYG 209
>gi|113952777|ref|YP_729666.1| 50S ribosomal protein L4 [Synechococcus sp. CC9311]
gi|122945812|sp|Q0ID06.1|RL4_SYNS3 RecName: Full=50S ribosomal protein L4
gi|113880128|gb|ABI45086.1| ribosomal protein L4 [Synechococcus sp. CC9311]
Length = 211
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ LDLK A +A ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VRDWQGKEAGKASLDLKVAKEASALDLMHRAVLRQQAHSRQGTASTLTRSEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+R A+ TA+ A E+ +V
Sbjct: 66 KQKGTGRARQGSVRTPLRPGGGIIFGPKPRSYNLAMNRKERRSALRTAL--MARIEDLVV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F PKTKE I+A+ R + K ++ SE V +S RN+ T+K++ L
Sbjct: 124 VKDFATTLTTPKTKEIIDALGRLDVSATSKVLIILTNPSEAVRRSIRNLETVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LV+ + + YG
Sbjct: 184 NVFDLLHANKLVVGEDALAKIQEVYG 209
>gi|318042563|ref|ZP_07974519.1| 50S ribosomal protein L4 [Synechococcus sp. CB0101]
Length = 211
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ L+LK A +A +VHRA++ + + R+GTASTLTR EV GGGRKPY
Sbjct: 6 VRDWQGKEAGKATLELKVAKETSANDLVHRAVVRQLAHARQGTASTLTRAEVAGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGGVVFGPKPR +++ +N+KE+RLA+ TA+ S AA + V
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGVVFGPKPRTYNLAMNRKERRLALRTALMSRAA--DITV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F + PKTKE A+ R+G+ K ++ SE V +S RN+ +K++ L
Sbjct: 124 VKGFAAGLDTPKTKEITAALGRFGIADGAKVLVVLDAPSEVVRRSVRNLEKVKLIAADQL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L A LV++ + + YG
Sbjct: 184 NVFDLLHANHLVVSEEALAKIQEVYG 209
>gi|86610029|ref|YP_478791.1| 50S ribosomal protein L4 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|109893646|sp|Q2JIM6.1|RL4_SYNJB RecName: Full=50S ribosomal protein L4
gi|86558571|gb|ABD03528.1| ribosomal protein L4 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 316
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ ++ GE +G L LK A P+TA +++ AL M N R+G A T TR EVRGGGRKP+
Sbjct: 6 VKNWQGETVGSAELSLKVARPETAAHILYLALRRQMTNARQGNAHTKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGV+FGP+ R++++ +N+KE++LA+ TA+ S E+ IV
Sbjct: 66 KQKGTGRARAGSIRSPLWRKGGVIFGPRKREYNLAMNRKERQLALRTALQS--RVEDLIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F + PKT+ +A+ RWG+ Q A +V E SE VE++ RNI +K++ +
Sbjct: 124 VEDFQEQLNPPKTRAVAQALLRWGVMEDQSALLIVAERSEAVERAVRNIARVKLIGLDQI 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+ + +++T S ++ L R+G
Sbjct: 184 NVFDLLNVDWVLITVSALEQLKARWG 209
>gi|33241160|ref|NP_876102.1| 50S ribosomal protein L4 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|46577200|sp|Q7V9W3.1|RL4_PROMA RecName: Full=50S ribosomal protein L4
gi|33238690|gb|AAQ00755.1| Ribosomal protein L4 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 211
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L + G++ G+ L+LK A +A ++HRA++ + R+GTASTLTR EVRGGGRKPY
Sbjct: 6 VLDWQGKEAGKASLNLKVAKDSSAVDLMHRAVLRQQAHSRQGTASTLTRAEVRGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGG++FGPKPR +++ +N+KE+RLA+ TA+ A + I
Sbjct: 66 KQKGTGRARQGSIRTPLRPGGGIIFGPKPRQYNLSMNRKERRLALRTAL--MARFNDVIA 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++F K + PKTKE + + R + K ++ + S+ + +S RN+ +K++ L
Sbjct: 124 VKDFGSKLKVPKTKEIQDFLARLDISSNSKVLIILSQPSDIIRRSVRNLEKVKLIAAEHL 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N+FD+L+A +L++ + + YG
Sbjct: 184 NVFDLLNANSLIIGEDALGKIKEVYG 209
>gi|194477057|ref|YP_002049236.1| 50S ribosomal protein L4 [Paulinella chromatophora]
gi|171192064|gb|ACB43026.1| 50S ribosomal protein L4 [Paulinella chromatophora]
Length = 211
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ G+ ++LK A +A ++HRA++ + ++R+GTASTLTR EV+GGGRKPY
Sbjct: 6 VHDWQGQEAGKATVNLKVAKLSSAIDLMHRAVLRQLAHQRQGTASTLTRSEVKGGGRKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS RTPLRPGGGVVFGP PR +S+ +NKKE+RLA+ TA+ S AE++IV
Sbjct: 66 KQKGTGRARQGSTRTPLRPGGGVVFGPSPRTYSLGMNKKERRLALRTALMS--RAEDSIV 123
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ F ++PKTK +A+ R+G+ + K ++ S + S RN+ +K++ L
Sbjct: 124 IKGFGTGIDKPKTKTITDALERFGIGKETKVLIILDSPSSAITYSIRNLPKVKLIKADQL 183
Query: 236 NLFDILDAETLVLT 249
N+FD+L A ++L+
Sbjct: 184 NVFDLLHASKVLLS 197
>gi|90994503|ref|YP_536993.1| ribosomal protein L4 [Pyropia yezoensis]
gi|109893086|sp|Q1XDH5.1|RK4_PORYE RecName: Full=50S ribosomal protein L4, chloroplastic
gi|90819067|dbj|BAE92436.1| 50S ribosomal protein L4 [Pyropia yezoensis]
Length = 214
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 138/206 (66%), Gaps = 5/206 (2%)
Query: 44 LIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLT 103
+ V++QL + ++ G+ G L+LK + D+ +VHRAL+ KR+G+A+T T
Sbjct: 1 MTVNTQL--NYQVYNWEGQVSGNADLNLK-VSQDSGMYLVHRALVKQSNEKRQGSANTKT 57
Query: 104 RGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTA 163
R EVRGGGRKP+ QK TGRAR GS R+PL GGGV+FGPKPR ++ K+NKKE++LA+ TA
Sbjct: 58 RSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFGPKPRSFTKKMNKKERQLALRTA 117
Query: 164 IASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRN 223
+ + + NT++VE F+ F +PKTK F+EA+ RW LD +K +V + NV S RN
Sbjct: 118 LNNKSV--NTLIVENFNSYFHQPKTKLFMEAIHRWNLDLNKKVLVIVDKKDPNVYLSIRN 175
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLT 249
+ +++++ TLN+ +L A +++T
Sbjct: 176 LHNVELISADTLNIMALLAAHKIIIT 201
>gi|11465779|ref|NP_053923.1| ribosomal protein L4 [Porphyra purpurea]
gi|1710475|sp|P51313.1|RK4_PORPU RecName: Full=50S ribosomal protein L4, chloroplastic
gi|1276779|gb|AAC08199.1| 50S ribosomal protein L4 (chloroplast) [Porphyra purpurea]
Length = 214
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 137/206 (66%), Gaps = 5/206 (2%)
Query: 44 LIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLT 103
+ V +QL + ++ G+ G L+LK + D+ +VHRAL+ KR+G+A+T T
Sbjct: 1 MTVKTQL--NYQVYNWEGQVSGNADLNLK-ISKDSGMYLVHRALVKQSNEKRQGSANTKT 57
Query: 104 RGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTA 163
R EVRGGGRKP+ QK TGRAR GS R+PL GGGV+FGPKPR ++ K+NKKE +LA+ TA
Sbjct: 58 RSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFGPKPRSFAKKMNKKESQLALRTA 117
Query: 164 IASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRN 223
+ + + NT+VVE FD F++PKTK FIEA+ RW LD +K +V + NV S RN
Sbjct: 118 LNNKSV--NTLVVENFDTYFQKPKTKLFIEAITRWNLDLNKKLLVIVDKKDLNVYLSIRN 175
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLT 249
+ +++++ TLN+ +L A +++T
Sbjct: 176 LYNVEIISADTLNIMALLAAHKVIIT 201
>gi|323454820|gb|EGB10689.1| hypothetical protein AURANDRAFT_59906 [Aureococcus anophagefferens]
Length = 243
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 140/235 (59%), Gaps = 10/235 (4%)
Query: 30 LAKPNSLINLPPKPLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALIT 89
L P SL P L V++ + +P+ SF G G L LK+ + VVHR +
Sbjct: 15 LVAPASL-RRPATALAVAT---AEVPVKSFDGADAGTATLSLKTTKGEKDMYVVHRKYVN 70
Query: 90 DMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWS- 148
+ +N R+GTAST TR EVRGGGRKP+ QK TGRAR+GS RTPL+PGGGVVFGPKP+DW+
Sbjct: 71 ERRNARQGTASTKTRAEVRGGGRKPFKQKGTGRARQGSTRTPLKPGGGVVFGPKPKDWAN 130
Query: 149 IKINKKEKRLAISTAIASAAAAENTIVVEEFDGKF-ERPKTKEFIEAMRRWGLDPKQKAT 207
KIN+KE LAI AI + AA VV+ GKF PKTK + GLD +K T
Sbjct: 131 KKINRKEAELAIGIAIQNKAA--RATVVDSLAGKFVGAPKTKSVTSMLSGLGLDADEK-T 187
Query: 208 FLVMEVSENV-EKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LV + ++V EKS+ N+ ++ + + D+L A ++ T D++N RYG
Sbjct: 188 VLVYDTEDDVLEKSAANLPNCELRLQDEITVSDMLWANQVLFTKPAFDWVNERYG 242
>gi|378787350|gb|AFC39981.1| ribosomal protein L4 [Porphyra umbilicalis]
Length = 214
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 138/206 (66%), Gaps = 5/206 (2%)
Query: 44 LIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLT 103
+ V +QL + ++ G+ G L+L+ + ++ +VHRAL+ KR+G+A+T T
Sbjct: 1 MTVKTQL--NYQVYNWEGQVSGNANLNLE-ISQESGMYLVHRALVKQSSEKRQGSANTKT 57
Query: 104 RGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTA 163
R EVRGGGRKP+ QK TGRAR GS R+PL GGG++FGPKPR ++ K+NKKE++LA+ TA
Sbjct: 58 RSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGIIFGPKPRSFAKKMNKKERQLALRTA 117
Query: 164 IASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRN 223
+ + + NT+VVE F+ F++PKTK F+EA+ RW L+ +K +V + NV S RN
Sbjct: 118 LNNKSL--NTLVVENFNSYFQQPKTKLFMEAIIRWNLNLNKKVLVIVDKKDPNVYLSIRN 175
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLT 249
+ +++++ TLN+ +L A +++T
Sbjct: 176 LHNVEIISADTLNIMALLAAHKVIIT 201
>gi|356510175|ref|XP_003523815.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Glycine
max]
Length = 201
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 125/167 (74%), Gaps = 12/167 (7%)
Query: 32 KPNSLINLPPK-PLIVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITD 90
K N+ LP K PL +S + + PLP+L+F+GEK+GE++LDL+ PDTAR VVH A++TD
Sbjct: 39 KSNNFPILPSKNPLSISCKASPPLPVLNFSGEKVGESFLDLRFTPPDTARVVVHHAVVTD 98
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+QNKRRGTASTLTRGEVRGGGRKP+ QKKT RA RP GGV+FGPKP DW IK
Sbjct: 99 LQNKRRGTASTLTRGEVRGGGRKPFLQKKTSRA--------YRPCGGVIFGPKPHDWCIK 150
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKF-ERPKTKEFIEAMR 196
IN KEKRLAISTA+A+ A+ VE+F +F E+ KTKEFI AM+
Sbjct: 151 INCKEKRLAISTAVANVVASAVV--VEDFAAEFAEKLKTKEFIAAMK 195
>gi|338811126|ref|ZP_08623362.1| ribosomal protein L4/L1e [Acetonema longum DSM 6540]
gi|337276949|gb|EGO65350.1| ribosomal protein L4/L1e [Acetonema longum DSM 6540]
Length = 208
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+K GE L+ AVVH+AL+ + ++R+GTA+T TR +VRGGG+K
Sbjct: 4 VAVYNVAGQKTGEMELNENVFGIQFNEAVVHQALVMQLASRRQGTAATKTRAQVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP+PR +S ++ +K +RLAI +A+ SA AE
Sbjct: 64 PWKQKGTGRARAGSIRSPLWVGGGTVFGPQPRSYSFRMPRKVRRLAIKSAL-SAKVAEGE 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
++V + G F++PKTK+ I+ ++ + KA + E +ENVEKSSRNI +K +T
Sbjct: 123 LLVVDGIG-FDQPKTKQVIDLLKNFNA-ADNKALIITAEENENVEKSSRNIEGVKAITSM 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+FD+L + +++T V
Sbjct: 181 GLNVFDLLHHDKILITKDAV 200
>gi|20808659|ref|NP_623830.1| 50S ribosomal protein L4 [Thermoanaerobacter tengcongensis MB4]
gi|46577279|sp|Q8R7V5.1|RL4_THETN RecName: Full=50S ribosomal protein L4
gi|20517293|gb|AAM25434.1| Ribosomal protein L4 [Thermoanaerobacter tengcongensis MB4]
Length = 206
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 126/203 (62%), Gaps = 5/203 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + GE++GE L AV+H+A++ + N+R+GT ST TRGEVRGGGRK
Sbjct: 4 VPVYNVKGEQVGEIELKDSVFGVPVNVAVMHQAVVNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVFGPKPRD+S K+ KK KRLA+ +A++S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYKLPKKVKRLALKSALSSKVRDNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++EF K E+PKTK+ E ++ + + A +V + +NVE S+RN+ K L
Sbjct: 124 IVLDEF--KLEQPKTKKVAELLKNFN---AKSALIVVPQGEKNVELSARNMPNAKALYAN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
LN +D+L E ++T V +
Sbjct: 179 LLNTYDVLKYEKFIITKDAVAIV 201
>gi|289579144|ref|YP_003477771.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter italicus Ab9]
gi|297545328|ref|YP_003677630.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528857|gb|ADD03209.1| ribosomal protein L4/L1e [Thermoanaerobacter italicus Ab9]
gi|296843103|gb|ADH61619.1| ribosomal protein L4/L1e [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 206
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 128/207 (61%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE++GE L V+H+A++ + N+R+GT ST TRGEVRGGGRK
Sbjct: 4 VAVYNVKGEQVGEIELKDSVFGVPVNVPVMHQAVLNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVFGPKPRD+S K+ KK KRLA+ +A++S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYKLPKKVKRLALKSALSSKVRDNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++EF K ++PKTK+ +E ++ + +D A +V E +NVE S+RNI +K L
Sbjct: 124 IVLDEF--KLDQPKTKKVVELLKNFNVD---SALIVVPEGEKNVELSTRNIPGVKTLYAN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
LN +D+L + ++T V + Y
Sbjct: 179 YLNTYDVLKYDKFIITKDAVGIVEEVY 205
>gi|167036802|ref|YP_001664380.1| 50S ribosomal protein L4 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039521|ref|YP_001662506.1| 50S ribosomal protein L4 [Thermoanaerobacter sp. X514]
gi|256752633|ref|ZP_05493485.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus CCSD1]
gi|300915228|ref|ZP_07132543.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X561]
gi|307725152|ref|YP_003904903.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter sp. X513]
gi|320115224|ref|YP_004185383.1| 50S ribosomal protein L4/L1e [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326390660|ref|ZP_08212215.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus JW 200]
gi|345018533|ref|YP_004820886.1| 50S ribosomal protein L4 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939575|ref|ZP_10305219.1| 50S ribosomal protein L4, bacterial/organelle [Thermoanaerobacter
siderophilus SR4]
gi|226731436|sp|B0KCK1.1|RL4_THEP3 RecName: Full=50S ribosomal protein L4
gi|226731437|sp|B0K5P4.1|RL4_THEPX RecName: Full=50S ribosomal protein L4
gi|166853761|gb|ABY92170.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X514]
gi|166855636|gb|ABY94044.1| ribosomal protein L4/L1e [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748453|gb|EEU61505.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus CCSD1]
gi|300888952|gb|EFK84099.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X561]
gi|307582213|gb|ADN55612.1| ribosomal protein L4/L1e [Thermoanaerobacter sp. X513]
gi|319928315|gb|ADV79000.1| ribosomal protein L4/L1e [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993338|gb|EGD51775.1| ribosomal protein L4/L1e [Thermoanaerobacter ethanolicus JW 200]
gi|344033876|gb|AEM79602.1| ribosomal protein L4/L1e [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291325|gb|EIV99768.1| 50S ribosomal protein L4, bacterial/organelle [Thermoanaerobacter
siderophilus SR4]
Length = 206
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE++GE L V+H A++ + N+R+GT ST TRGEVRGGGRK
Sbjct: 4 VAVYNVKGEQVGEIELKDSVFGVPVNVPVMHEAVLNYLANQRQGTHSTKTRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GG+VFGPKPRD+S K+ KK KRLA+ +A++S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGIVFGPKPRDYSYKLPKKVKRLALKSALSSKVRDNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++EF K ++PKTK+ +E ++ + +D A +V E +NVE S+RNI +K L
Sbjct: 124 IVLDEF--KLDQPKTKKVVELLKNFNVD---SALIVVPEGEKNVELSARNIPGVKTLYAN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
LN +DIL + ++T V + Y
Sbjct: 179 YLNTYDILKYDKFIITKDAVGIVEEVY 205
>gi|291521897|emb|CBK80190.1| LSU ribosomal protein L4P [Coprococcus catus GD/7]
Length = 206
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 126/210 (60%), Gaps = 5/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L + + G ++GE L+ + ++H+A++ + R+GT S TR EV GGG
Sbjct: 2 AKLSVYNIEGNQVGEIELNDAVFGVEVNENLMHKAVVAQLAASRQGTQSAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF PKPRD+SIK+NKKE+RLAI +A+ +
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPKPRDYSIKLNKKERRLAIKSALTTKVNES 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++ F+ + KTK+F+ M +KA ++ E ++NV KS+ N+ T+K
Sbjct: 122 KLIVLDSFE--LDEIKTKKFVAVMNNL---KAEKALVVLNEKNDNVIKSANNVPTVKTAL 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
T+N++DIL +TLVLT V + Y
Sbjct: 177 TNTINVYDILKYDTLVLTQDAVATIQEVYA 206
>gi|302390959|ref|YP_003826779.1| 50S ribosomal protein L4P [Acetohalobium arabaticum DSM 5501]
gi|302203036|gb|ADL11714.1| LSU ribosomal protein L4P [Acetohalobium arabaticum DSM 5501]
Length = 209
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + G ++GE L+ + VVH A+ + KR GTAST TR EVRGGGRK
Sbjct: 4 LTLFDAEGSQVGEVELNQSIFDVEINEHVVHEAVTAQLAAKRAGTASTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGG FGP+PRD+S I KK KRLA+ +A+ + E
Sbjct: 64 PWRQKGTGRARHGSIRSPIWVGGGTTFGPQPRDYSKDIPKKVKRLAVKSALTAKVQDEEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKMLTP 232
VV+ F+ F++PKTK+ ++ + LD K K ++ E +N+ KS+RNI +K+L
Sbjct: 124 TVVDGFN--FDQPKTKQMVKVLE--ALDAKDKKVLVITAEKDDNLYKSARNIPDVKVLLG 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
+N++D+LD E +++T +
Sbjct: 180 SAVNVYDVLDNEQIIITKEAI 200
>gi|332798207|ref|YP_004459706.1| 50S ribosomal protein L4 [Tepidanaerobacter acetatoxydans Re1]
gi|438001126|ref|YP_007270869.1| LSU ribosomal protein L4p (L1e) [Tepidanaerobacter acetatoxydans
Re1]
gi|332695942|gb|AEE90399.1| ribosomal protein L4/L1e [Tepidanaerobacter acetatoxydans Re1]
gi|432177920|emb|CCP24893.1| LSU ribosomal protein L4p (L1e) [Tepidanaerobacter acetatoxydans
Re1]
Length = 208
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE+IGE L + ++HRA++ + N+R+GTA+TLTR EV GGGRKP+
Sbjct: 6 LFNIAGEQIGEIELSDDVFGVEVRPDIMHRAVVNYLANQRQGTANTLTRAEVAGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGV+FGPKPR + + KK KRLA+ +A+++ IV
Sbjct: 66 RQKGTGRARHGSIRSPLWRKGGVIFGPKPRSFKSTMPKKLKRLALKSALSAKVVENELIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ E PKTKE + ++ L+ +K+ ++ ENVEKS+RN+ ++K TL
Sbjct: 126 IDSLS--MEAPKTKEMVSILK--NLNADKKSLIVIAAKDENVEKSARNLPSVKTTYVNTL 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N +DIL+ + L++T + + Y
Sbjct: 182 NTYDILNHDNLIMTKEAAELVEEVYA 207
>gi|238916266|ref|YP_002929783.1| 50S ribosomal protein L4 [Eubacterium eligens ATCC 27750]
gi|259491557|sp|C4Z2T1.1|RL4_EUBE2 RecName: Full=50S ribosomal protein L4
gi|238871626|gb|ACR71336.1| large subunit ribosomal protein L4 [Eubacterium eligens ATCC 27750]
Length = 206
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 126/207 (60%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + N R+GT S TR EV GGGRK
Sbjct: 4 VSVYNIEGKEVGSIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQSAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF PKPRD+S K+NKKEKR+A+ +A++S A
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPKPRDYSFKMNKKEKRIALLSALSSKVADNKI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ F+ + KTK+F E M +D KA ++ ++NV S RNI T+K+
Sbjct: 124 VVLDAFN--LDEIKTKKFAEVMSNLKVD---KALVVIEGENKNVVLSGRNIPTVKVSATN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
+N +D+L ETLV+T + V+ L Y
Sbjct: 179 EINTYDVLKYETLVVTKAAVEKLEEVY 205
>gi|51209942|ref|YP_063606.1| ribosomal protein L4 [Gracilaria tenuistipitata var. liui]
gi|68052933|sp|Q6B8V4.1|RK4_GRATL RecName: Full=50S ribosomal protein L4, chloroplastic
gi|50657696|gb|AAT79681.1| 50S ribosomal protein L4 [Gracilaria tenuistipitata var. liui]
Length = 217
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++HRALI + N R A T TRGEV GGGRKP+ QK TGRAR GSNR+PL GGGV+FG
Sbjct: 39 ILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGVIFG 98
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+ + + KINKKEK+LA+ I + +NTIV E F K P TK + ++++ LD
Sbjct: 99 PRHKKYVNKINKKEKQLALRILINN--KFKNTIVTENFISKISTPNTKILVNNLKKYNLD 156
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+V E S ++ S+RN+ +++L LN+ +L A +++ +D +N Y
Sbjct: 157 TNNNILIIVNEKSNDLYLSTRNLKNVELLAANHLNIVSLLKANHIIINKDALDIINKMYN 216
>gi|154483186|ref|ZP_02025634.1| hypothetical protein EUBVEN_00887 [Eubacterium ventriosum ATCC
27560]
gi|149735994|gb|EDM51880.1| 50S ribosomal protein L4 [Eubacterium ventriosum ATCC 27560]
Length = 206
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 126/210 (60%), Gaps = 5/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ G ++G L + +VH+A+++ + N R+GT TR EV GGG
Sbjct: 2 AKVSVLNMEGSEVGTIELSDAVFGVEVNEHLVHQAVLSQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR+A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKMNKKEKRIALKSALTSRVNEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E KFE PKTKEF + M L+ K KA ++ E N KS++NI T+K
Sbjct: 122 KLIVVDEL--KFEAPKTKEFAKVMA--NLNTK-KALVVLNENDANTVKSAKNIPTVKTAL 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
T+N++DIL +T+V+ + V + Y
Sbjct: 177 TNTINVYDILKYDTVVVEKAAVATIEEVYA 206
>gi|375086501|ref|ZP_09732908.1| 50S ribosomal protein L4 [Megamonas funiformis YIT 11815]
gi|291533620|emb|CBL06733.1| LSU ribosomal protein L4P [Megamonas hypermegale ART12/1]
gi|374564846|gb|EHR36126.1| 50S ribosomal protein L4 [Megamonas funiformis YIT 11815]
Length = 207
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G++IG+ L+ + +VH+A++ + +R GT +T TRG VRGGGRK
Sbjct: 4 VAVYTVAGQQIGDIELNESVFGVEVNEGLVHQAVVMQLAAQRLGTHATKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR ++ ++ +K++RLAI A+ +
Sbjct: 64 PWKQKGTGRARSGSTRSPLWVGGGTVFGPSPRSYAFRMPRKQRRLAIKCALTDKVNNGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E D F PKTKE ++ M + + +KA + +V ENVEKSSRNI +K ++
Sbjct: 124 IVLESLD--FAAPKTKEVVKMMSDFNV--AEKALIVTADVVENVEKSSRNIPGVKAISSC 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++DIL+ L +T +
Sbjct: 180 GLNVYDILNHNKLFITKDAI 199
>gi|336436040|ref|ZP_08615753.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008080|gb|EGN38099.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_4_56FAA]
Length = 206
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A+++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A++S A
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALSSRVAEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E KF+ KTK+F E + ++ KA ++ + + NVE S+RNI +K
Sbjct: 122 KFIVVDEI--KFDEIKTKKFQEVLNNLNVN---KALVVLEDGNTNVEISARNIANVKTAR 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N+FDIL T++ T + V
Sbjct: 177 TNTINVFDILKYNTVIATKAAV 198
>gi|299830599|ref|YP_003735047.1| 50S ribosomal protein L4 [Durinskia baltica]
gi|297384963|gb|ADI40262.1| 50S ribosomal protein L4 [Durinskia baltica]
Length = 215
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 57 LSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYS 116
L FTG+ + T S + ++H+ L+ ++R+GT ST TR EVRGGGRKP+
Sbjct: 12 LDFTGKALDSTAELQLSVLEKSGNYLLHKDLLRHYNSQRQGTVSTKTRSEVRGGGRKPWR 71
Query: 117 QKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVV 176
QK TGRAR GSNR+PL GGGV+FGPKP+ SIK+NKKE+RLA+ T + + N +V+
Sbjct: 72 QKGTGRARAGSNRSPLWKGGGVIFGPKPKTVSIKVNKKERRLALQTLLYN--KKNNILVI 129
Query: 177 EEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLN 236
E + KTK F++ + ++ QK +V E + ++ +++N+ T++++ LN
Sbjct: 130 ENLENGLTDSKTKSFLDICKNCSVNLDQKVLIVVAEKTVPLKLATQNLKTVELILASNLN 189
Query: 237 LFDILDAETLVLTP 250
F +L+A+ ++LTP
Sbjct: 190 TFSLLNAKQILLTP 203
>gi|374992980|ref|YP_004968479.1| 50S ribosomal protein L4 [Desulfosporosinus orientis DSM 765]
gi|357211346|gb|AET65964.1| 50S ribosomal protein L4, bacterial/organelle [Desulfosporosinus
orientis DSM 765]
Length = 207
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 128/202 (63%), Gaps = 8/202 (3%)
Query: 54 LPILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +L+ G +GE L D+ P+ V+H A+++ + +RRGT S L RGEVRGGG
Sbjct: 4 VQVLNMEGAAVGEIELNEDVFGITPNVH--VLHSAVVSQLAGERRGTQSALLRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS+R+PL GGGV+F PKPR + K+ KK +RLA+ +A++S +
Sbjct: 62 RKPWRQKGTGRARSGSSRSPLWKGGGVIFAPKPRKYGFKLPKKVRRLALYSALSSKVIDQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++ KT+E ++ ++ L ++KA ++ EV E V +S+RNI +K +
Sbjct: 122 QLIVLDALS--LSEAKTREMVKVLK--ALHVEKKAMIVMDEVDEAVLRSARNIEGVKAMD 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N+FD+L+ +TLV+T + V
Sbjct: 178 VAGMNVFDLLNHDTLVMTKAAV 199
>gi|358066907|ref|ZP_09153396.1| 50S ribosomal protein L4 [Johnsonella ignava ATCC 51276]
gi|356694946|gb|EHI56598.1| 50S ribosomal protein L4 [Johnsonella ignava ATCC 51276]
Length = 206
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 5/209 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + G+++G+ L+ + +VH A++ + NKR+GT TRGEVRGGG
Sbjct: 2 AKVSVYDIEGKEVGDMELNDAIFGIEVNEHIVHMAVVAHLANKRQGTQKAKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+SIK+NKKE+RLA+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSIRSPQWKGGGVVFAPTPRDYSIKLNKKERRLALKSALTSRVNDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV++F K + KTK+ + A+ + KA + E N S+RNI +K +
Sbjct: 122 KFIVVDDF--KMDEIKTKKMVAALTNLKV---SKALIVTSENETNTVLSARNIRGVKTAS 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
P T+N++DIL T+V + + V+ + Y
Sbjct: 177 PNTINVYDILKYNTVVASKAAVNTIEEVY 205
>gi|312127227|ref|YP_003992101.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor hydrothermalis
108]
gi|312793938|ref|YP_004026861.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor kristjanssonii
177R1B]
gi|344996424|ref|YP_004798767.1| 50S ribosomal protein L4 [Caldicellulosiruptor lactoaceticus 6A]
gi|311777246|gb|ADQ06732.1| ribosomal protein L4/L1e [Caldicellulosiruptor hydrothermalis 108]
gi|312181078|gb|ADQ41248.1| ribosomal protein L4/L1e [Caldicellulosiruptor kristjanssonii
177R1B]
gi|343964643|gb|AEM73790.1| ribosomal protein L4/L1e [Caldicellulosiruptor lactoaceticus 6A]
Length = 208
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +P+ + G++IGE L+ V+H+A++ + N+R+GT + TR EVRGGG
Sbjct: 2 AKVPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R P GGVVF KPRD+SI + KK KRLA+ A++S
Sbjct: 62 RKPWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVKRLALKCALSSKVKEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ +D + KTKE + ++ GL+ QKA ++ E +E ++KS+RNI +K L
Sbjct: 122 NLIVLDRWD--MNQYKTKEVLRVLKNLGLE-NQKALIVIPEKNEYLQKSTRNIPEVKTLQ 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+FDIL + V+ V
Sbjct: 179 VGNLNVFDILKYDKFVILQDAV 200
>gi|337286817|ref|YP_004626290.1| 50S ribosomal protein L4/L1e [Thermodesulfatator indicus DSM 15286]
gi|335359645|gb|AEH45326.1| ribosomal protein L4/L1e [Thermodesulfatator indicus DSM 15286]
Length = 207
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
++H+ + M R GTA T TRGEVRGGGRKP+ QK TGRAR+GS R P GGGVVF
Sbjct: 31 GLLHQVVRWQMARWRAGTACTKTRGEVRGGGRKPWRQKGTGRARQGSIRAPHWVGGGVVF 90
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GPKPRD+ K+NKKE+RLA+ A+++ A +VV++F + KTK+F+E ++ G
Sbjct: 91 GPKPRDYEFKVNKKERRLALKMALSARAQEGKLLVVDDFG--LDEIKTKKFVEFLKGLG- 147
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVL 248
+ A ++ E E VEKS+RN+ T+K+LT LN++DILD E L++
Sbjct: 148 --AEDALVVLPERDEVVEKSARNLPTVKVLTVDGLNVYDILDYEYLII 193
>gi|374339857|ref|YP_005096593.1| 50S ribosomal protein L4 [Marinitoga piezophila KA3]
gi|372101391|gb|AEX85295.1| 50S ribosomal protein L4, bacterial/organelle [Marinitoga
piezophila KA3]
Length = 225
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 30/224 (13%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAA----PDTARAVVHRALITDMQNKRRGTASTLTRGEV 107
+ L + S GEKIG +D+K + P+T +++R + + N+RRGTAST TR EV
Sbjct: 2 AQLDLYSVKGEKIGT--IDVKDSIFAIEPNTD--LLYRYVDMQLANRRRGTASTKTRAEV 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
RGGGRKP+SQK TGRAR GS R+PL GGV FGPKPRDWS K+ KK KRLA+ +A++
Sbjct: 58 RGGGRKPWSQKHTGRARAGSIRSPLWRHGGVTFGPKPRDWSKKLTKKMKRLALKSALSVR 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRN 223
N IV+++ FE+P+TK E ++ +G + + T +V+ + NV+ S++N
Sbjct: 118 VKENNLIVIDDLT--FEKPRTKSMKEVLKNFGFENTK--TLVVLPWKKDGYINVKLSAKN 173
Query: 224 IGTLKMLTPRT--------------LNLFDILDAETLVLTPSTV 253
I T+K++ LN+FDI++ E ++LT TV
Sbjct: 174 IPTVKVIIADNPNQGKDGKKVNVDGLNVFDIINNEKVILTKDTV 217
>gi|312622046|ref|YP_004023659.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor kronotskyensis
2002]
gi|312202513|gb|ADQ45840.1| ribosomal protein L4/L1e [Caldicellulosiruptor kronotskyensis 2002]
Length = 208
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +P+ + G++IGE L+ V+H+A++ + N+R+GT + TR EVRGGG
Sbjct: 2 AKVPVYNIEGQQIGEIELNDSIFNVPINNHVLHQAVVAHLANRRQGTFAAKTRAEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R P GGVVF KPRD+SI++ KK KRLA+ A++S
Sbjct: 62 RKPWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIELPKKVKRLALKCALSSKVKEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ +D + KTKE + ++ GL+ QKA ++ E +E ++KS++NI +K L
Sbjct: 122 NLIVLDRWD--MNQYKTKEVLRVLKNLGLE-NQKALIVIPEKNEYLQKSTKNIPEVKTLQ 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+FDIL + V+ V
Sbjct: 179 VGNLNVFDILKYDKFVILQDAV 200
>gi|297618383|ref|YP_003703542.1| 50S ribosomal protein L4/L1e [Syntrophothermus lipocalidus DSM
12680]
gi|297146220|gb|ADI02977.1| ribosomal protein L4/L1e [Syntrophothermus lipocalidus DSM 12680]
Length = 208
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + G ++GE L + + +A +H+ + + N R GTA+T TRGEVRGGGRK
Sbjct: 4 VPLYNMNGTQVGEIELSDEVFGIEPNQAAMHQVVKMQLANHRVGTAATKTRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
PY QK TGRAR GS R+PL GGVVFGP+PRD+S + KK +RLA+ +A++S N
Sbjct: 64 PYRQKGTGRARAGSIRSPLWRKGGVVFGPQPRDYSYTLPKKIRRLALKSALSSKVKGRNM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E E PKTK +E + +D +KA + + NV KS+RNI +K +
Sbjct: 124 IVMDELT--LEAPKTKRMVEILNALQVD--RKALIVTADGDVNVYKSARNIPGIKPVRAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
++++DIL+ + LV+T V
Sbjct: 180 FMSVYDILNHDKLVITKDAV 199
>gi|403066602|ref|YP_006639091.1| 50S ribosomal protein L4 (chloroplast) [Saccharina japonica]
gi|378787515|gb|AFC40145.1| 50S ribosomal protein L4 (chloroplast) [Saccharina japonica]
Length = 215
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 8/219 (3%)
Query: 44 LIVSSQLASPLPILSFTGEKIG-ETYLDLKSA-APDTARAVVHRALITDMQNKRRGTAST 101
+I+ L P+ IL TGE+ G E L LKS A +T V+ RA + N+R+G+AST
Sbjct: 1 MILQKILTFPVKIL--TGEESGDEITLTLKSKEATNTINYVIQRAYLAQRSNERQGSAST 58
Query: 102 LTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAIS 161
LTR EV+GGGRKP+ QK TGRAR GSNR+PL GGGV FGPKP+ +S KIN+KE +L++
Sbjct: 59 LTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKLYSSKINRKEWQLSLR 118
Query: 162 TAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSS 221
+ + A ++ +++ F+ F KT I+ + +G++ + +V ++ E + KS+
Sbjct: 119 SLL--IAKQKDITIIDNFN--FLEYKTSNIIKVLNIFGINLFENTLIVVPKIEEKLLKST 174
Query: 222 RNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
RNI T+K++ LNL IL A+ L++T ++ + Y
Sbjct: 175 RNIKTIKLIVANNLNLKQILLAKNLLITKDSLKTIEETY 213
>gi|218135280|ref|ZP_03464084.1| hypothetical protein BACPEC_03185 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990665|gb|EEC56676.1| 50S ribosomal protein L4 [[Bacteroides] pectinophilus ATCC 43243]
Length = 206
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + N R+GT TR EV GGGRK
Sbjct: 4 VSVYNIEGKEVGSLELNDAIFGVEINEHLVHMAVVQQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNKKEKRAALKSALTSRVVDSKI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++E KF KTK F M+ LD KA ++ + NV S+RNI +K+ P
Sbjct: 124 VVLDEI--KFNEIKTKNFANVMKNLKLD---KALMVIGDNDANVILSARNIPDVKVSQPN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL +TLV+T V
Sbjct: 179 TINVYDILKYDTLVVTKDAV 198
>gi|325261495|ref|ZP_08128233.1| ribosomal protein L4/L1 family protein [Clostridium sp. D5]
gi|324032949|gb|EGB94226.1| ribosomal protein L4/L1 family protein [Clostridium sp. D5]
Length = 206
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ D +VH A+++ + N R+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGKEVGTIDLNDAVFGVDVNEHLVHMAVVSQLANNRQGTQKAKTRAEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E + F+ KTK+F E + ++ KA ++ + ++NVE S+RNI +K
Sbjct: 122 KFIVIDELN--FDEIKTKKFQEVLNNLNVN---KALVVLEDGNKNVEISARNIKEVKTAH 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N+FDIL T+++T + V
Sbjct: 177 TNTINVFDILKYNTVIVTKAAV 198
>gi|260886877|ref|ZP_05898140.1| ribosomal protein L4/L1 family protein [Selenomonas sputigena ATCC
35185]
gi|330839325|ref|YP_004413905.1| ribosomal protein L4/L1e [Selenomonas sputigena ATCC 35185]
gi|402832964|ref|ZP_10881587.1| 50S ribosomal protein L4 [Selenomonas sp. CM52]
gi|260863476|gb|EEX77976.1| ribosomal protein L4/L1 family protein [Selenomonas sputigena ATCC
35185]
gi|329747089|gb|AEC00446.1| ribosomal protein L4/L1e [Selenomonas sputigena ATCC 35185]
gi|402281707|gb|EJU30333.1| 50S ribosomal protein L4 [Selenomonas sp. CM52]
Length = 207
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 127/193 (65%), Gaps = 4/193 (2%)
Query: 62 EKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTG 121
+++G+ L+ + +VH+A++ + ++R GT +T TRG VRGGGRKP+ QK TG
Sbjct: 12 QQVGDIELNDSVFGVEMNAGLVHQAVVMQLASRRLGTHATKTRGLVRGGGRKPWRQKGTG 71
Query: 122 RARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDG 181
RAR GS R+PL GGG VFGP+PR ++ ++ KK++RLAI A++ A+ + IV+++
Sbjct: 72 RARSGSTRSPLWVGGGTVFGPQPRSYAFRMPKKQRRLAIKCALSDKVASGDFIVLDDL-- 129
Query: 182 KFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDIL 241
+F+ PKTK ++ + +G+D K+ + ++ +ENVE SSRNI +K + LN++DIL
Sbjct: 130 QFDAPKTKSVVKMLGDFGVDA--KSLIITLDENENVELSSRNIPGVKAINTMGLNVYDIL 187
Query: 242 DAETLVLTPSTVD 254
+ L +T + ++
Sbjct: 188 NHTKLFITKAAIE 200
>gi|325288579|ref|YP_004264760.1| 50S ribosomal protein L4P [Syntrophobotulus glycolicus DSM 8271]
gi|324963980|gb|ADY54759.1| LSU ribosomal protein L4P [Syntrophobotulus glycolicus DSM 8271]
Length = 209
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G +GE L+ + V+H ++ M N R GT STL R EVRGGGRK
Sbjct: 4 VQVVNMQGSPVGEIELNERIFGVTPNIGVMHSVVVAQMANARVGTHSTLGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR G+ R+PL GGG+VFGPKPRD+S K+ KK KRLA+ +A++S N
Sbjct: 64 PWRQKGTGRARAGTIRSPLWRGGGIVFGPKPRDYSKKVPKKVKRLALCSALSSKVNESNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV++ KF+ PKTK+ ++ + +D +KA + +NV+ S+RNI +K +
Sbjct: 124 IVVDDL--KFDAPKTKDMVKFLEAIKVD--RKALVVTEGSDKNVQLSARNIQGVKTASAE 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
++N+ D+L + LV++ V YG
Sbjct: 180 SINVVDLLKHDVLVISKQAVIKAEEVYG 207
>gi|302871499|ref|YP_003840135.1| 50S ribosomal protein L4 [Caldicellulosiruptor obsidiansis OB47]
gi|312135495|ref|YP_004002833.1| 50S ribosomal protein L4/L1e [Caldicellulosiruptor owensensis OL]
gi|302574358|gb|ADL42149.1| ribosomal protein L4/L1e [Caldicellulosiruptor obsidiansis OB47]
gi|311775546|gb|ADQ05033.1| ribosomal protein L4/L1e [Caldicellulosiruptor owensensis OL]
Length = 208
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +P+ + G++IGE L+ V+H+A++ + N+R+GT + TR EVRGGG
Sbjct: 2 AKVPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R P GGVVF KPRD+SI + KK +RLA+ A++S
Sbjct: 62 RKPWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVRRLALKCALSSKVKEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ +D + KTKE + ++ GL+ QKA ++ E +E ++KS+RNI +K L
Sbjct: 122 NLIVLDRWD--MNQYKTKEVLRVLKNLGLE-NQKALIVIPEKNEYLQKSTRNIPEVKTLQ 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+FDIL + V+ V
Sbjct: 179 VGNLNVFDILKYDKFVILQDAV 200
>gi|255659504|ref|ZP_05404913.1| ribosomal protein L4/L1 family protein [Mitsuokella multacida DSM
20544]
gi|260848056|gb|EEX68063.1| ribosomal protein L4/L1 family protein [Mitsuokella multacida DSM
20544]
Length = 207
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 124/202 (61%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + T ++G+ L+ + ++H+A++ + +R GT +T TRG VRGGG
Sbjct: 2 ATVAVYDITNNQVGDIELNDSIFGVEMNAGLLHQAVVMQLAAQRLGTHATKTRGFVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R+PL GGG VFGP PR ++ + +K++RLA+ A++ +
Sbjct: 62 RKPWKQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYAFSMPRKQRRLALKCALSDKVKSG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ IV+E D F+ PKTK+ ++ + +G+D KA F+ + +ENVEKS+RNI K +
Sbjct: 122 DLIVLESLD--FDAPKTKQVVKMLGDFGVD--SKALFITADEAENVEKSARNIPGAKAIQ 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++DIL + L +T +
Sbjct: 178 ALGLNVYDILHHDKLFITKDAI 199
>gi|222529729|ref|YP_002573611.1| 50S ribosomal protein L4 [Caldicellulosiruptor bescii DSM 6725]
gi|254803711|sp|B9MKI0.1|RL4_ANATD RecName: Full=50S ribosomal protein L4
gi|222456576|gb|ACM60838.1| ribosomal protein L4/L1e [Caldicellulosiruptor bescii DSM 6725]
Length = 208
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +P+ + G++IGE L+ V+H+A++ + N+R+GT + TR EVRGGG
Sbjct: 2 AKVPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R P GGVVF KPRD+SI + KK KRLA+ A++S
Sbjct: 62 RKPWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVKRLALKCALSSKVKEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ +D + KTKE + ++ GL+ QKA ++ E +E ++KS++NI +K L
Sbjct: 122 NLIVLDRWD--MNQYKTKEVLRVLKNLGLE-NQKALIVIPEKNEYLQKSTKNIPEVKTLQ 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+FDIL + V+ V
Sbjct: 179 VGNLNVFDILKYDKFVILQDAV 200
>gi|302669962|ref|YP_003829922.1| 50S ribosomal protein L4 [Butyrivibrio proteoclasticus B316]
gi|302394435|gb|ADL33340.1| ribosomal protein L4 RplD [Butyrivibrio proteoclasticus B316]
Length = 207
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 8/204 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSA--APDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+ + + + G+++G+ +DL A + +VH A++ + + R+GT TR EV G
Sbjct: 2 ANVSVYNMEGKEVGK--IDLSDAIFGVEVNEHLVHMAVLQQLADNRQGTQKAKTRSEVSG 59
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A+
Sbjct: 60 GGRKPWRQKGTGHARQGSIRAPQWKGGGVVFAPVPRDYSFKMNKKEKRAALKSALTDKVQ 119
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
N +VV+E KF+ KTK F E M L+ +KA ++ + +NV S+RN+
Sbjct: 120 NNNIVVVDEL--KFDEIKTKRFAEVMN--NLNATRKALVVLADNDQNVVLSARNLAEANT 175
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
TLN++DI++A TLVLT V
Sbjct: 176 TLTNTLNVYDIVNARTLVLTKDAV 199
>gi|89893218|ref|YP_516705.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense Y51]
gi|423073127|ref|ZP_17061870.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense DP7]
gi|122483925|sp|Q250N1.1|RL4_DESHY RecName: Full=50S ribosomal protein L4
gi|89332666|dbj|BAE82261.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense Y51]
gi|361855957|gb|EHL07891.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense DP7]
Length = 207
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G +GE LD + V+H+A++ + ++RRGT STL RGEVRGGGRK
Sbjct: 4 VQVVNMQGSPVGELELDEYVFGIEPNTHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG V+FGPKPR + + KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ KT+E ++ ++ L+ +KA + E E +E+S+RNI +K
Sbjct: 124 IVLEDLS--LNEAKTREMVKVLQ--ALNVSKKALIVTDEFMETIERSARNIAGIKTTAVE 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L+++ +V+T + V
Sbjct: 180 GMNIYDLLNSDVIVMTKAAV 199
>gi|291518044|emb|CBK73265.1| LSU ribosomal protein L4P [Butyrivibrio fibrisolvens 16/4]
Length = 206
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 5/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ A + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 AKVSVFNMEGKEVGSMDLNDSIFAVEINEHLVHMAVVQQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSVVNEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E K + KTK+F + + + +KA ++ +NV S++NI T+K
Sbjct: 122 KFIVVDEL--KLDSIKTKDFAKVLTNLNV---EKALVVLDTNDQNVVMSAKNIPTVKTAL 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
T+N++DIL T+V+T + VD + Y
Sbjct: 177 TNTINVYDILKYNTVVVTKAAVDQIQEVYA 206
>gi|238922831|ref|YP_002936344.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656]
gi|259491558|sp|C4ZBD5.1|RL4_EUBR3 RecName: Full=50S ribosomal protein L4
gi|238874503|gb|ACR74210.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656]
gi|291523733|emb|CBK89320.1| LSU ribosomal protein L4P [Eubacterium rectale DSM 17629]
gi|291528801|emb|CBK94387.1| LSU ribosomal protein L4P [Eubacterium rectale M104/1]
Length = 206
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 124/208 (59%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++ + L+ + +VH A++ + NKR+GT TR EVRGGGRK
Sbjct: 4 VAVYNMEGKEVDKIELNDSIFGVEINEHLVHMAVLQQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVVENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+E K + KTK+F+E ++ + +KA ++ ++ E V S+ NI T+K
Sbjct: 124 VVVDEL--KLDEIKTKKFVEVLKNLNV---EKALVVLNDMDEKVIASAANIPTVKTTQTN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+FD+L +T+V+T + V + Y
Sbjct: 179 ELNVFDVLKYDTVVVTKAAVATIEEVYA 206
>gi|282857361|ref|ZP_06266598.1| ribosomal protein, L4/L1 family [Pyramidobacter piscolens W5455]
gi|282584861|gb|EFB90192.1| ribosomal protein, L4/L1 family [Pyramidobacter piscolens W5455]
Length = 207
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 129/210 (61%), Gaps = 11/210 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ I++ +GE +GE L + + +H+ ++ + + R+GTAST RGEVRGGG+K
Sbjct: 4 IKIMNISGEVVGEKTLSDEVFGASVHVSAMHQVVVAQLAHARQGTASTKMRGEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS+R+PL GGGVV GPKPR + +K+NKK + LA+ +A++ ++
Sbjct: 64 PWKQKHTGRARAGSSRSPLWVGGGVVHGPKPRSYDLKVNKKVRALAMRSALSMRVIEQSL 123
Query: 174 IVVEEFDGKFERPKTKE---FIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
VE F FE P TK+ FI++++ +K FL+ + ENV +S+ NI K+L
Sbjct: 124 CAVENFG--FEAPSTKKMKGFIDSLK------AKKILFLLDQRDENVVRSASNIPGAKVL 175
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
++N+ D++ + +V TP+ ++ L Y
Sbjct: 176 HVDSINVLDLVHHDHVVATPAVLEKLEEVY 205
>gi|325678593|ref|ZP_08158203.1| 50S ribosomal protein L4 [Ruminococcus albus 8]
gi|324109643|gb|EGC03849.1| 50S ribosomal protein L4 [Ruminococcus albus 8]
Length = 207
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 123/202 (60%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + ++ TG K+ +T L+ + +A++H ++ + N+R+GT STLTR EVRGGG
Sbjct: 2 SQIAVVDMTGNKVADTELNDAIFGIEPNKALMHAMVVNYLANQRQGTQSTLTRTEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GG+ GPKPRD+S +NKKE+RLA+ +A+++
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWVHGGIALGPKPRDYSYSLNKKERRLAMKSALSTKVIDS 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IVV E + K KTK ++ ++ G + KA + +V V KS+ NI +K T
Sbjct: 122 NLIVVNEIETK--EYKTKVMVDMLKAIGAEG--KALIVTADVDAKVVKSAANIPGVKTAT 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
TLN++DIL+ + V++ V
Sbjct: 178 VNTLNVYDILNYDKFVVSSDAV 199
>gi|378824576|ref|YP_005089746.1| rpl4 gene product (chloroplast) [Synedra acus]
gi|371572775|gb|AEX37871.1| ribosomal protein L4 (chloroplast) [Synedra acus]
Length = 215
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 125/199 (62%), Gaps = 4/199 (2%)
Query: 57 LSFTGEKIGETYLDLK-SAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ GE++ T +LK ++ ++H+ ++ + ++GT+ST TR EVRGGGRKP+
Sbjct: 12 VNLAGERLDST-CELKIKVLENSGNYLIHKDILRHHISTKQGTSSTKTRSEVRGGGRKPW 70
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSNR+PL GGGV+FGPKP+ K+NKKE+RLA+ T + + +N ++
Sbjct: 71 KQKGTGRARAGSNRSPLWKGGGVIFGPKPKTIEYKLNKKERRLALQTLLYN--KKDNVLL 128
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE + + PKT FI+ + G++ QK +V +E+++ S +NI L+++ L
Sbjct: 129 VENLENSLDIPKTANFIKICDKCGINLNQKTLLIVSVKTESLKLSVQNIKNLELICASQL 188
Query: 236 NLFDILDAETLVLTPSTVD 254
N ++ A+ ++LTP ++
Sbjct: 189 NTLSLIKAKQIILTPLALN 207
>gi|435852976|ref|YP_007314295.1| 50S ribosomal protein L4, bacterial/organelle [Halobacteroides
halobius DSM 5150]
gi|433669387|gb|AGB40202.1| 50S ribosomal protein L4, bacterial/organelle [Halobacteroides
halobius DSM 5150]
Length = 209
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
LP+ G+ +G L+ + + VVH A+ + KR GTA T TRG+VRGGGRK
Sbjct: 4 LPLYDTEGQTVGNVDLNDEIFDVEINENVVHEAVTAQLAAKRAGTAKTKTRGQVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGG FGP+PR + + KK K+LA+ +A+ SA AEN+
Sbjct: 64 PWRQKGTGRARHGSIRSPIWVGGGTTFGPQPRSYEKNVPKKVKKLAVKSAL-SAKVAENS 122
Query: 174 I-VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLT 231
+ VV+EFD FE+PKTK+ + + + K +V+ V + N+ KS+ NI +K++T
Sbjct: 123 LSVVDEFD--FEQPKTKQMVSVLDNF--KAADKKVLIVLNVRDNNIYKSASNIPGVKVVT 178
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
+N++D+L+++ +++T ++
Sbjct: 179 SNQVNVYDVLNSDKVLITKGAIN 201
>gi|302388087|ref|YP_003823909.1| 50S ribosomal protein L4 [Clostridium saccharolyticum WM1]
gi|302198715|gb|ADL06286.1| ribosomal protein L4/L1e [Clostridium saccharolyticum WM1]
Length = 206
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ D +VH A+++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVDVNEHLVHMAVVSQLANKRQGTQKAKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I++NKKE+RLA+ +A+ S
Sbjct: 64 PWKQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIRLNKKERRLALKSALTSRVNENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E KF+ KTK+F + + KA ++ E S N S+RNI +K
Sbjct: 124 IVVDEL--KFDEIKTKKFQTVLNNLKVS---KALVVMGEDSTNAVMSARNIAAVKTAFAN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL T+V T + V
Sbjct: 179 TINVYDILKYSTVVATKTAV 198
>gi|376403793|ref|YP_005090154.1| rpl4 gene product (chloroplast) [Fucus vesiculosus]
gi|269991356|emb|CAX12540.1| 50S ribosomal protein L4 [Fucus vesiculosus]
Length = 215
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 127/208 (61%), Gaps = 6/208 (2%)
Query: 55 PILSFTG-EKIGETYLDLKSA-APDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
PI TG E + L LK A +T V+HRA +T N+R+GTASTLTR EVRGGGR
Sbjct: 10 PIKLLTGNESKDKITLTLKVKDANETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGR 69
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP QK GRAR GSNR+PL GGGV FGPKP+ +S KIN+KE +L + + + S N
Sbjct: 70 KPLRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLIS--KQNN 127
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
I+V+ + KTK I+ ++ + ++ +K F++ ++ +N+ +S+ NI T+K+
Sbjct: 128 IIIVDNLN--ITEYKTKNIIKILKIFNINLSEKTLFILPKIEKNLLRSTNNIKTIKLTIA 185
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRY 260
LNL IL A+ L++T ++ + Y
Sbjct: 186 SNLNLKQILLAKNLLVTKDSLKIIEDTY 213
>gi|363891264|ref|ZP_09318443.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM2]
gi|402837871|ref|ZP_10886386.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium OBRC8]
gi|361965321|gb|EHL18303.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM2]
gi|402274302|gb|EJU23486.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium OBRC8]
Length = 208
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G + + + A + V+ A+ + N+R+GT S TR EVRGGGRK
Sbjct: 4 IDVLDINGNVVEQMEISEDIFAVEVNEHCVYEAVKNHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KINKK KR+A+ + + +
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYKINKKVKRIALKSVLTDKVNNQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+ E PKTK F + M+ +D K KA F+ + +NV +S RNI + +
Sbjct: 124 IVLNEL--TMNEPKTKVFAQTMKNLKIDGK-KALFVTKQNDQNVVRSGRNIYGVSVAFAD 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N +DI++ E LV+T V
Sbjct: 181 VINTYDIMNHEVLVMTKDAV 200
>gi|188584837|ref|YP_001916382.1| 50S ribosomal protein L4 [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226730697|sp|B2A4E0.1|RL4_NATTJ RecName: Full=50S ribosomal protein L4
gi|179349524|gb|ACB83794.1| LSU ribosomal protein L4P [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 207
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 4/196 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G ++GE LD A D ++H A+ + +KRRGTAS TR EVRGGGRKP+ QK T
Sbjct: 11 GSQVGEITLDDSIFATDINETLMHEAVNMHLASKRRGTASAKTRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR GS R+P+ GGG+ F PKPRD+S K+ KK KR AI +A+ + +++EE
Sbjct: 71 GRARHGSIRSPIWVGGGISFAPKPRDYSYKMPKKAKRKAIKSALTTKLNNGEIVILEELT 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTK+ IE + L KA + NV +S+RNI + LN++D+
Sbjct: 131 --MEAPKTKKIIEMLE--NLSINHKAMIVTGASDLNVYRSTRNIPGVSSALANNLNVYDV 186
Query: 241 LDAETLVLTPSTVDFL 256
L+ + LVLT V +
Sbjct: 187 LNHDYLVLTKDAVSVI 202
>gi|327399522|ref|YP_004340391.1| 50S ribosomal protein L4 [Hippea maritima DSM 10411]
gi|327182151|gb|AEA34332.1| ribosomal protein L4/L1e [Hippea maritima DSM 10411]
Length = 207
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 127/206 (61%), Gaps = 5/206 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ + +GE ++++ + +R + + N R+GTAST TRGEV GGG+K
Sbjct: 3 VKVVDKKNQAVGEVEINIQPKEVKNKGVLFNRVVRAMLMNARQGTASTKTRGEVSGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGGV+FGPKPRD+ +K+NKKEKR+A A+A
Sbjct: 63 PWRQKGTGRARAGSIRSPLWVGGGVIFGPKPRDYELKMNKKEKRVAFIEALAQRIEEGKL 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ FE+PKT++ E ++ L +KA F++ + EN S RNI +++
Sbjct: 123 IVIDDLS--FEKPKTRDAYEIVKNLNL---KKALFVLEKGMENAYLSLRNIKGVEVRNID 177
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGR 259
TLN +D+L + +++ + V+ LNGR
Sbjct: 178 TLNTYDVLRFQNIIIPKTVVEKLNGR 203
>gi|147676656|ref|YP_001210871.1| 50S ribosomal protein L4 [Pelotomaculum thermopropionicum SI]
gi|189029511|sp|A5D5J1.1|RL4_PELTS RecName: Full=50S ribosomal protein L4
gi|146272753|dbj|BAF58502.1| ribosomal protein L4 [Pelotomaculum thermopropionicum SI]
Length = 206
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE++GE L + + V+H A++ + N+R GT T TR EVRGGGRKP+
Sbjct: 6 LYNTNGEQVGELALKDEIFGVEVHEPVLHDAVVMHLANRRLGTHDTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGG++FGP PRD+S + +K +RLA+ +A+++ + + +V
Sbjct: 66 RQKGTGRARHGSIRSPLWRGGGIIFGPHPRDYSYSLPRKVRRLALKSALSAKVNSGDILV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++E K ++PKTKE + +D A + E E VE+S+RNI +K + L
Sbjct: 126 LDEL--KLDQPKTKEMARILNNLKVD---DALLVTAEKDEAVERSARNIPNIKPVQAALL 180
Query: 236 NLFDILDAETLVLTPSTV 253
N++DIL + LV+T V
Sbjct: 181 NVYDILAYDKLVMTRDAV 198
>gi|146297284|ref|YP_001181055.1| 50S ribosomal protein L4 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166234648|sp|A4XLS9.1|RL4_CALS8 RecName: Full=50S ribosomal protein L4
gi|145410860|gb|ABP67864.1| ribosomal protein L4/L1e [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 208
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 124/200 (62%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + G++IGE L+ V+H+A++ + N+R+GT + TR EVRGGGRK
Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVF KPRD+SI + KK +RLA+ A++S N
Sbjct: 64 PWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVRRLALKCALSSKVKENNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++++D + +TKE I ++ GL+ +KA ++ E +E ++KS++NI +K L
Sbjct: 124 IVLDKWD--MNQYRTKEVIRVLKNLGLE-NEKALIVIPEKNEYLQKSTKNIPEVKTLQVG 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+FDIL + ++ V
Sbjct: 181 NLNVFDILKYDKFIILQDAV 200
>gi|219666491|ref|YP_002456926.1| 50S ribosomal protein L4 [Desulfitobacterium hafniense DCB-2]
gi|254803731|sp|B8G1W7.1|RL4_DESHD RecName: Full=50S ribosomal protein L4
gi|219536751|gb|ACL18490.1| ribosomal protein L4/L1e [Desulfitobacterium hafniense DCB-2]
Length = 207
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G +GE LD + V+H+A++ + ++RRGT STL RGEVRGGGRK
Sbjct: 4 VQVVNMQGSPVGELELDEYVFGIEPNTHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG V+FGPKPR + + KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ KT+E ++ ++ L+ +KA + E E +++S+RNI +K
Sbjct: 124 IVLEDLS--LNEAKTREMVKVLQ--ALNVGKKALIVTDEFMETIDRSARNIAGIKTTAVE 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L+++ +V+T + V
Sbjct: 180 GMNIYDLLNSDVIVMTKAAV 199
>gi|83591275|ref|YP_431284.1| 50S ribosomal protein L4P [Moorella thermoacetica ATCC 39073]
gi|109893605|sp|Q2RFP8.1|RL4_MOOTA RecName: Full=50S ribosomal protein L4
gi|83574189|gb|ABC20741.1| LSU ribosomal protein L4P [Moorella thermoacetica ATCC 39073]
Length = 207
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++GE LD + AV+H A++ + ++RRGTA+T +V GGGRK
Sbjct: 4 VALYNIQGQQVGEVDLDDSVFGGEVNEAVLHDAVVMQLASRRRGTAATRGWADVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG V+FGP+PRD+ ++ KK +RLA+ +A+AS N
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVIFGPQPRDYGYRLPKKVRRLALRSALASKVRDGNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E K E+P+TK+ ++ L+ + KA + NVE S+RN+ ++ LT
Sbjct: 124 IVLDEL--KMEKPRTKDMAHILK--NLNAENKALVVTATREPNVELSARNLPGVRFLTSD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L + LV+T V
Sbjct: 180 GINVYDLLAHDKLVITKDAV 199
>gi|332982708|ref|YP_004464149.1| 50S ribosomal protein L4P [Mahella australiensis 50-1 BON]
gi|332700386|gb|AEE97327.1| LSU ribosomal protein L4P [Mahella australiensis 50-1 BON]
Length = 207
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + G+++GE L + + A +H+ + + NKR+GT S TRGEVRGGGRK
Sbjct: 4 VPVYNIEGQQVGEIELKDEIFGIEVNEAALHQVVQMQLANKRQGTQSAKTRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVF PKPRD+S + KK +RLA+ +A+ S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYSYTLPKKLRRLAMKSALTSKVRDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ E+PKTKE +R L +K ++ E E ++KSSRNI +K
Sbjct: 124 IVLDNIS--IEQPKTKEMFRILR--NLKADRKVLMVLPEKDEIIQKSSRNIPGVKTALVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DIL+ + ++ V
Sbjct: 180 TLNVYDILNCDKFIILKDAV 199
>gi|160881784|ref|YP_001560752.1| 50S ribosomal protein L4 [Clostridium phytofermentans ISDg]
gi|189029497|sp|A9KJJ3.1|RL4_CLOPH RecName: Full=50S ribosomal protein L4
gi|160430450|gb|ABX44013.1| ribosomal protein L4/L1e [Clostridium phytofermentans ISDg]
Length = 206
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 123/200 (61%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + ++H A+++ + NKR+GT S TR EV GGGRK
Sbjct: 4 VKVYNIEGKEVGSLELNDAIFGVEVNEHLMHMAVVSQLANKRQGTQSAKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF PKPRD+S K+N+KEK LAI +A+ S A+
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPKPRDYSFKMNRKEKSLAIKSALTSRVEAQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + + KTK+F + ++ KA ++ + ENV S+RNI T++ T
Sbjct: 124 IVLDSMN--MDEIKTKKFKAVLENLKVN---KALVVLDKKDENVILSARNIPTVRTATSN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++DI+ +TLV+T V
Sbjct: 179 AINVYDIVKYDTLVITKDAV 198
>gi|266620262|ref|ZP_06113197.1| ribosomal protein L4/L1 family protein [Clostridium hathewayi DSM
13479]
gi|288868165|gb|EFD00464.1| ribosomal protein L4/L1 family protein [Clostridium hathewayi DSM
13479]
Length = 206
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G L+ + +VH A+++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGNEVGTLELNDAVFGVNVNEHLVHLAVVSQLANKRQGTQKAKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++IK+NKKE++LA+ +A+ S
Sbjct: 64 PWKQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIKLNKKERKLALKSALTSRVNENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E KF+ KTK+F + + KA +V + S N KS+RNI +K
Sbjct: 124 IVVDEL--KFDEIKTKKFQNVLNNLKVS---KALVVVGDDSTNAVKSARNIPAVKTAFVN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL T+V T + V
Sbjct: 179 TINVYDILKYNTVVATKTAV 198
>gi|357419487|ref|YP_004932479.1| 50S ribosomal protein L4 [Thermovirga lienii DSM 17291]
gi|355396953|gb|AER66382.1| LSU ribosomal protein L4P [Thermovirga lienii DSM 17291]
Length = 208
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 126/209 (60%), Gaps = 6/209 (2%)
Query: 54 LPILSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ +++ GE +GE L D +AP A+ H+ ++ + N+R+GT ST +RGEVRGGGR
Sbjct: 4 VKVVNLKGEIVGEQQLSDAVFSAPVHVPAM-HQVVVAQLANRRQGTHSTKSRGEVRGGGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TGRAR GS R+P+ GGGV GP PRD+ K+NKK +RLA+ +A++ +
Sbjct: 63 KPWRQKHTGRARHGSRRSPIWVGGGVAHGPVPRDYHQKVNKKVRRLALKSALSLKVMEDK 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+V++ FD E+P TK + + ++ +K F+V + S KS NI K+L
Sbjct: 123 LVVLDSFD--MEKPSTKAVVSFLE--SINGGKKPLFMVAQSSNAAYKSVSNIPKAKVLHV 178
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYG 261
++N++D++ + L++T V + YG
Sbjct: 179 DSINVYDLVHHDHLIITKDAVKRVEEVYG 207
>gi|317054767|ref|YP_004103234.1| 50S ribosomal protein L4 [Ruminococcus albus 7]
gi|315447036|gb|ADU20600.1| ribosomal protein L4/L1e [Ruminococcus albus 7]
Length = 207
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 122/202 (60%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + ++ TG K+ +T L+ + +A++H ++ + N+R+GT STLTR EV+GGG
Sbjct: 2 SKIAVVDMTGNKVADTELNDAIFGIEPNKALMHAMVVNFLANQRQGTQSTLTRTEVQGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GG+ GPKPRD+S +NKKEKRLA+ +A ++
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWVHGGIALGPKPRDYSYSLNKKEKRLAMKSAFSTKVIDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IVV E + K KTK ++ ++ G + KA + +V V KS+ NI +K T
Sbjct: 122 NLIVVNEIETK--EYKTKVMVDMLKAIG--AQGKALIVTADVDAKVVKSAANIPGVKTAT 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
TLN++DIL+ + +++ V
Sbjct: 178 VNTLNVYDILNYDKFIVSSEAV 199
>gi|310659501|ref|YP_003937222.1| 50S ribosomal subunit protein L4 [[Clostridium] sticklandii]
gi|308826279|emb|CBH22317.1| 50S ribosomal subunit protein L4 [[Clostridium] sticklandii]
Length = 207
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G+K+ E L A + + V+ + + N+R+GT S TR EVRGGGRK
Sbjct: 4 VDVLNINGQKVEELELSESIFAAEISEYAVYEVIKNHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S +NKK +RLA+ + + + N
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYSVNKKVRRLALKSVLTTKVNEGNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + PKTK+FI + ++ +KA + E S NV KS RNI + +
Sbjct: 124 IVLDALE--MNAPKTKDFIAMLS--AVNAGKKALVVTSENSPNVVKSGRNIPGVDITFVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DI+ ++L++T V
Sbjct: 180 TLNVYDIMRHDSLIITKEAV 199
>gi|296131837|ref|YP_003639084.1| 50S ribosomal protein L4 [Thermincola potens JR]
gi|296030415|gb|ADG81183.1| ribosomal protein L4/L1e [Thermincola potens JR]
Length = 206
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE++GE L + + +VH ++ + N+R GTAST TR EV GGGRK
Sbjct: 4 VALYNIKGEQVGEIELKDEVFGIEPNEGLVHDVVVMQLANRRVGTASTKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGG+ FGPKPR ++ + KK +RLA+ + ++S + N
Sbjct: 64 PWRQKGTGRARHGSIRSPIWRGGGITFGPKPRSFNYTMPKKARRLALKSVLSSKVSDGNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + +PKTKE E + R +KA + +V +NV KS+RNI + LT
Sbjct: 124 IVLDTLE--MAQPKTKEMAEILNRL---KAKKAVVVTADVDQNVIKSARNIPGVTPLTAS 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++D+++ E LV+T V
Sbjct: 179 GLNVYDLVNHEKLVITKDAV 198
>gi|227499194|ref|ZP_03929329.1| 50S ribosomal protein L4/L1e [Acidaminococcus sp. D21]
gi|352685684|ref|YP_004897669.1| 50S ribosomal protein L4 [Acidaminococcus intestini RyC-MR95]
gi|226904641|gb|EEH90559.1| 50S ribosomal protein L4/L1e [Acidaminococcus sp. D21]
gi|350280339|gb|AEQ23529.1| 50S ribosomal protein L4/L1e [Acidaminococcus intestini RyC-MR95]
Length = 209
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSA-APDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ I TG+K GE + + AVVH+A++ N+R+GT +T TRG VRGGGR
Sbjct: 4 VAIYDLTGKKTGEEIELMDYVFGVEFNEAVVHQAVVMQQANERQGTHATKTRGMVRGGGR 63
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TGRAR GS R+PL GGG +FGP PR +I + +K +RLAI A++S A +
Sbjct: 64 KPWKQKGTGRARAGSVRSPLWVGGGTIFGPSPRSHAIDMPRKARRLAIRCALSSKVADGS 123
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTLKMLT 231
++V+ F KTK +E ++ G + K ++ + +ENVE SSRNI +K L+
Sbjct: 124 LVIVDGLS--FADNKTKNTVEMLK--GFEASNKKALIITDGENENVELSSRNIEKVKALS 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+FDIL+AE ++L V
Sbjct: 180 NDCLNVFDILNAEKVLLAKDAV 201
>gi|269792793|ref|YP_003317697.1| 50S ribosomal protein L4 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100428|gb|ACZ19415.1| ribosomal protein L4/L1e [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 208
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 4/205 (1%)
Query: 57 LSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYS 116
++F GE IGE L +H+ ++ + N R GT T RGEV GGGRKP+
Sbjct: 7 VNFNGEVIGEVELSEAVFGAPVHVPAMHQVVVAHLANCRVGTHDTKDRGEVSGGGRKPWR 66
Query: 117 QKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVV 176
QK TGRAR+GS R+PL GGGV GP PRD+ K+NKK +RLA+ +A+ A +N +V+
Sbjct: 67 QKHTGRARQGSIRSPLWVGGGVAHGPHPRDYHQKVNKKVRRLALRSALTLKAKEDNMLVL 126
Query: 177 EEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLN 236
E F+ E PKTK I + R + +K ++ E NV KS+ NI +L +LN
Sbjct: 127 ERFE--LEAPKTKAMISFLER--VQGGKKPLLVIHEPDHNVRKSASNIPGAMVLHVDSLN 182
Query: 237 LFDILDAETLVLTPSTVDFLNGRYG 261
++DIL+ + +++T V + +G
Sbjct: 183 VYDILNHDRMIVTAEAVRKIEEVFG 207
>gi|347533197|ref|YP_004839960.1| 50S ribosomal protein L4 [Roseburia hominis A2-183]
gi|345503345|gb|AEN98028.1| 50S ribosomal protein L4 [Roseburia hominis A2-183]
Length = 206
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 5/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++ L+ + +VH A++ + N R+GT TR EVRGGG
Sbjct: 2 AKVAVYNMEGKEVDSLELNDAIFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGVVF P PRD+S K+NKKEKR A+ +A+ S A
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTHGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVAEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E K + KTK+F+E M+ + +KA ++ ++ NV KS+ N+ T+K
Sbjct: 122 KFIVLDEL--KLDEIKTKKFVEVMKNLKV---EKALVVLNDMDVNVIKSADNVPTVKTAQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+FD+L +T+V+T V + Y
Sbjct: 177 TNELNVFDVLKYDTVVVTKDAVKTIEEVYA 206
>gi|169830437|ref|YP_001716419.1| 50S ribosomal protein L4 [Candidatus Desulforudis audaxviator
MP104C]
gi|226730652|sp|B1I1I9.1|RL4_DESAP RecName: Full=50S ribosomal protein L4
gi|169637281|gb|ACA58787.1| ribosomal protein L4/L1e [Candidatus Desulforudis audaxviator
MP104C]
Length = 207
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+++GE L AV+H ++ + N+R+GT T TR EVRGGGRKP+
Sbjct: 6 VFNIEGQQVGEIELSEAVFGQPVNDAVLHEVVVMQLANRRQGTHDTKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR G+ R+P+ GGG+VFGP PRD+S ++ KK KRLA+ +A+A+ A +V
Sbjct: 66 RQKGTGRARHGTIRSPIWRGGGIVFGPHPRDYSYRVPKKVKRLALKSALATKVDAGRILV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ + PKTKE + L + A + E + NVEKS+RN+ +K L R L
Sbjct: 126 LDALE--LPGPKTKEMARILA--NLKAGEGALVVTAERNVNVEKSARNLPGVKSLEARQL 181
Query: 236 NLFDILDAETLVLTPSTV 253
N++D+L+ L++T V
Sbjct: 182 NVYDLLNHPHLIITRDAV 199
>gi|407474712|ref|YP_006789112.1| 50S ribosomal protein L4 [Clostridium acidurici 9a]
gi|407051220|gb|AFS79265.1| 50S ribosomal protein L4 [Clostridium acidurici 9a]
Length = 213
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + TGE++G+ L+ + + V++ + + NKR+GT S TR EVRGGGRK
Sbjct: 10 VALYNVTGEQVGDIELNDSIFGVEVNQHVLYEVVKNQLANKRQGTQSVKTRAEVRGGGRK 69
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVF PKPRD+S K+ KK +RLA+ +A++S A
Sbjct: 70 PWRQKGTGRARQGSTRAPQWVGGGVVFAPKPRDYSYKVPKKVRRLAMKSALSSKVANNEI 129
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E PKTKE ++ ++ +K + + ENV KS+ NI ++
Sbjct: 130 IVLDEL--VLNAPKTKEMTSILK--NINSAKKVLIVTADKDENVVKSANNIPGVETTLVS 185
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DIL ++ ++T V
Sbjct: 186 TLNVYDILKHDSFIITKDAV 205
>gi|149072010|ref|YP_001293581.1| 50S ribosomal protein L4 [Rhodomonas salina]
gi|134302961|gb|ABO70765.1| 50S ribosomal protein L4 [Rhodomonas salina]
Length = 216
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 5/196 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE ET + L S + ++HRA++ R+GT+S TR EVRGGG+KP+
Sbjct: 11 VHTLAGEATSETSITL-SVQDTNPKYLLHRAIVAQNNGLRQGTSSCKTRSEVRGGGKKPW 69
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TG AR GS+ +PL GGGV FGP+PR ++ K+N KE RLA++TA+ S + T+V
Sbjct: 70 KQKGTGNARSGSSNSPLWKGGGVAFGPQPRSYAKKMNTKEWRLALNTALQS--RFDKTVV 127
Query: 176 VEEFDGKFERPKTKEFIEAMRRWG--LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
VE+F + PKTK +E + + D K ++ +V++NV S RN+ + +L
Sbjct: 128 VEDFSNSIKNPKTKNAVEVLSKITNIADNSSKTLIILSDVNDNVNLSLRNLSNVTLLRSN 187
Query: 234 TLNLFDILDAETLVLT 249
TLN+ DIL A +++T
Sbjct: 188 TLNIRDILLANKIIIT 203
>gi|258513641|ref|YP_003189863.1| 50S ribosomal protein L4 [Desulfotomaculum acetoxidans DSM 771]
gi|257777346|gb|ACV61240.1| ribosomal protein L4/L1e [Desulfotomaculum acetoxidans DSM 771]
Length = 206
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE++GE L + + +V+H A++ + +R+GT T TRGEVRGGG+K
Sbjct: 4 VALFNIKGEQVGEVALKDEVFGIEVNESVLHDAVVMQLAGRRQGTHDTKTRGEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR G+ R+P+ GGG+VFGP PR + K+ KK +RLA+ +A++S A N
Sbjct: 64 PWRQKGTGRARHGTIRSPIWRGGGIVFGPHPRTYKYKLPKKVRRLALKSALSSKVLAGNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V++ E PKTKE + ++ +D KA ++ + NV KS+RNI +K +
Sbjct: 124 KVLDALS--MEMPKTKEMVGILKNLQVD---KALLVIADKDMNVIKSARNIPGIKPVGAA 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L TLV+T V
Sbjct: 179 GVNVYDLLKHTTLVITKDAV 198
>gi|392392082|ref|YP_006428684.1| 50S ribosomal protein L4 [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523160|gb|AFL98890.1| 50S ribosomal protein L4, bacterial/organelle [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 207
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G +GE L+ + V+H+A++ + ++RRGT STL RGEVRGGGRK
Sbjct: 4 VQVVNMQGSSVGELELNEYVFGIEPNIHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG V+FGPKPR + + KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ KT+E ++ ++ L+ +KA + E E +E+S+RNI +K
Sbjct: 124 IVLEDLS--LNEAKTREMVKVLQ--ALNVSKKALIVTDEFIETIERSARNIVGVKTTAVE 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L+++ +V+T + V
Sbjct: 180 GMNVYDLLNSDVIVMTKAAV 199
>gi|410658526|ref|YP_006910897.1| LSU ribosomal protein L4p (L1e) [Dehalobacter sp. DCA]
gi|410661513|ref|YP_006913884.1| LSU ribosomal protein L4p (L1e) [Dehalobacter sp. CF]
gi|409020881|gb|AFV02912.1| LSU ribosomal protein L4p (L1e) [Dehalobacter sp. DCA]
gi|409023869|gb|AFV05899.1| LSU ribosomal protein L4p (L1e) [Dehalobacter sp. CF]
Length = 210
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 7/200 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+++ G +GE L+ + V+H A++ + N R GT STL R EVRGGGRKP+
Sbjct: 6 VVNMQGSPVGEMELNETIFGIEPNTHVMHSAVVAQLANARVGTHSTLGRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR G+ R+PL GGG+VFGPKPRD+S K+ KK KRLA+ +A++S + IV
Sbjct: 66 KQKGTGRARAGTIRSPLWRGGGIVFGPKPRDYSKKLPKKVKRLALCSALSSKVIDNSLIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
V++ FE+PKTKE ++ + +D K LV+E ++ NV S+RNI +
Sbjct: 126 VDQIS--FEQPKTKEMVKLLEALKID---KKALLVVENNDDNNVLVSARNIQGVLTSRAD 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D+L + +V T + V
Sbjct: 181 ALNVIDLLKYDFVVFTKAAV 200
>gi|158319544|ref|YP_001512051.1| 50S ribosomal protein L4 [Alkaliphilus oremlandii OhILAs]
gi|166990945|sp|A8MLE1.1|RL4_ALKOO RecName: Full=50S ribosomal protein L4
gi|158139743|gb|ABW18055.1| ribosomal protein L4/L1e [Alkaliphilus oremlandii OhILAs]
Length = 207
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ I + +G+++ E L + ++ + + N+R+GT S TR EVRGGGRK
Sbjct: 4 VAIYNVSGQQVSEIELSENVFGVEVNEHAMYEVVKNQLANRRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG+VF PKPRD+S I KK +RLA+ +A+ S +
Sbjct: 64 PWKQKGTGRARVGSIRSPLWVGGGIVFAPKPRDYSYTIPKKVRRLALKSALTSKVNSNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E K + PKTKE + ++ +D +KA ++ E SE V KS+ NI ++
Sbjct: 124 IVLDEL--KLDAPKTKEMVNILKNLNVD--KKALIVMGEKSEAVIKSANNIQGVQTALVN 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
T+N++DIL + L++T V + Y
Sbjct: 180 TINVYDILKYDKLIITKDAVQKVEEVYA 207
>gi|336430425|ref|ZP_08610372.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336018234|gb|EGN47986.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 206
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 121/209 (57%), Gaps = 9/209 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAA--PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + G+++G LDL A + +VH A++ + NKR+GT TR EV GGG
Sbjct: 4 VAVFNMEGKEVGT--LDLSDAVFGVEVNEHLVHMAVVWQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVQEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E KF+ KTK F + M + K ++ E +NV S++N+ T+
Sbjct: 122 KLIVVDEL--KFDEIKTKNFKQVMDNLKVS---KGLVVINENDKNVVMSAKNMPTVNTTL 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
TLN++D++ A T+VLT V + Y
Sbjct: 177 TSTLNVYDVMKAGTVVLTKDAVKTIEEVY 205
>gi|154505168|ref|ZP_02041906.1| hypothetical protein RUMGNA_02681 [Ruminococcus gnavus ATCC 29149]
gi|336433163|ref|ZP_08612989.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794647|gb|EDN77067.1| 50S ribosomal protein L4 [Ruminococcus gnavus ATCC 29149]
gi|336017125|gb|EGN46893.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_58FAA]
Length = 206
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L + +VH A+++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGKEVGTIDLSDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S+K+NKKEKR A+ +A++S A
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSMKLNKKEKRAALKSALSSRVAEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E + F KTK F + ++ KA ++ + + N E S+RNI +K
Sbjct: 122 KFIVIDEMN--FGEIKTKNFQNMLNSLNVN---KALVVLEDGNVNAELSARNIADVKTAR 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N+FDIL T++ T + V
Sbjct: 177 TNTINVFDILKYNTVIATKAAV 198
>gi|342733057|ref|YP_004771896.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456425|ref|YP_005669023.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417959301|ref|ZP_12602136.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-1]
gi|417965178|ref|ZP_12606767.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-4]
gi|417966153|ref|ZP_12607560.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-5]
gi|417968156|ref|ZP_12609199.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-co]
gi|418015536|ref|ZP_12655101.1| ribosomal protein L4/L1 family protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373310|ref|ZP_12965401.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330512|dbj|BAK57154.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505871|gb|EGX28165.1| ribosomal protein L4/L1 family protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984771|dbj|BAK80447.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380333672|gb|EIA24208.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-1]
gi|380338716|gb|EIA27582.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-4]
gi|380340262|gb|EIA28883.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-co]
gi|380341699|gb|EIA30173.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380343365|gb|EIA31747.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-5]
Length = 208
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 124/210 (59%), Gaps = 6/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + + + GEK+GE L + + + VH+ ++T + NKR+GT S TR EV GGG
Sbjct: 2 SKVAVYNICGEKVGELELLKEIFDVEIKKYAVHQVVVTQLANKRQGTQSAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR+GS R P GGVVF PKPRD+ + ++K +++AI++ + S E
Sbjct: 62 KKPWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYRMNVSKTLRKVAITSVLTSKVKDE 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNIGTLKML 230
N +V++ F PKTKE ++ M + ++ LV E S +NV +SS N+ +K++
Sbjct: 122 NLLVLDSIS--FNFPKTKEMVKVMNNFNIESNM---LLVTETSNKNVYRSSTNLQNVKVI 176
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+N++D+L + LV+T V L Y
Sbjct: 177 PVNNINVYDLLKYDKLVMTQGAVRKLEEVY 206
>gi|323703547|ref|ZP_08115193.1| ribosomal protein L4/L1e [Desulfotomaculum nigrificans DSM 574]
gi|333922449|ref|YP_004496029.1| 50S ribosomal protein L4 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323531538|gb|EGB21431.1| ribosomal protein L4/L1e [Desulfotomaculum nigrificans DSM 574]
gi|333748010|gb|AEF93117.1| ribosomal protein L4/L1e [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 206
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +GE+IGE L + + AV+H ++ + N+R+GT T TR EVRGGGRK
Sbjct: 4 VALYNISGEQIGEVELKDEVFGIEPNEAVMHDVVVMHLANQRQGTHDTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS+R+P+ GG+VFGP PRD+S + KK +RLA+ +A++S +N
Sbjct: 64 PWRQKGTGRARAGSSRSPIWRKGGIVFGPHPRDYSYSLPKKVRRLALKSALSSKVLDDNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ E PKTKE + + D KA + + NVEKS+RNI +K +
Sbjct: 124 IVLDKL--TMEVPKTKEMVSILANLKAD---KALVVTADRDINVEKSARNIPGVKPVKAG 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
++++D+L + LV+T V
Sbjct: 179 GVSVYDLLKYDKLVITKDAV 198
>gi|363893533|ref|ZP_09320631.1| 50S ribosomal protein L4/L1 [Eubacteriaceae bacterium ACC19a]
gi|361963837|gb|EHL16903.1| 50S ribosomal protein L4/L1 [Eubacteriaceae bacterium ACC19a]
Length = 208
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G + + + + A + V+ + + N+R+GT S TR EVRGGG+K
Sbjct: 4 IDVLDINGNVVEQMEISEEIFAVEINEHCVYETVKNHLANRRQGTQSAKTRAEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KINKK KR+A+ + + +
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYKINKKVKRIALKSVLTDKVNNQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+ E PKTK F + M+ +D K KA F+ + +NV +S RNI + +
Sbjct: 124 IVLNELT--MNEPKTKVFAQTMKNLKIDGK-KALFVTKQNDQNVVRSGRNIYGVSVAFAD 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N +DI++ E LV+T V
Sbjct: 181 VINTYDIINHEVLVMTKDAV 200
>gi|121534760|ref|ZP_01666581.1| ribosomal protein L4/L1e [Thermosinus carboxydivorans Nor1]
gi|121306780|gb|EAX47701.1| ribosomal protein L4/L1e [Thermosinus carboxydivorans Nor1]
Length = 208
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 123/200 (61%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + TG + GE L + +AV+H+A++ + N+R GT +T TRG VRGGG+K
Sbjct: 4 VAVYDITGAQTGEIELSDSVFGVEVNKAVLHQAVVMQLANQRLGTHATKTRGMVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP+PR ++I + +K +RLA+ +A+++ +
Sbjct: 64 PWRQKGTGRARAGSIRSPLWVGGGTVFGPQPRSYAISMPRKARRLALKSALSAKVQSGEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E+F F PKTK ++ + + KA ++ E ENV KS+RNI +K +
Sbjct: 124 VVLEDFT--FAEPKTKNVVKMLDNLKV-ADDKALIILSEADENVIKSARNIPGVKAIAST 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L + +++T V
Sbjct: 181 GINVYDLLYHDKVLVTKGAV 200
>gi|406982931|gb|EKE04191.1| hypothetical protein ACD_20C00097G0008 [uncultured bacterium]
Length = 211
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 131/208 (62%), Gaps = 10/208 (4%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
++ + + S G ++G+ LD K + V+H AL + N R GTAST TR EVRG
Sbjct: 1 MSKQITLHSSNGAQVGQVDLDEKVFGIEPNIHVMHLALRRQLNNARAGTASTKTRSEVRG 60
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GG+KP+ QK TGRAR GS R+PL GGGV+FGPKPRD+S + K +RLA+ +A+ +A
Sbjct: 61 GGKKPWKQKGTGRARAGSLRSPLFAGGGVIFGPKPRDYSFSMPTKARRLALRSAL--SAR 118
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS----ENVEKSSRNIG 225
++ ++++F +PKTKE ++ + ++ K +V E+S +++E S+RNI
Sbjct: 119 TQDIKILQDFTA-IAQPKTKELVKVLESLKVNGK---VLIVAELSNAENQHLELSARNIP 174
Query: 226 TLKMLTPRTLNLFDILDAETLVLTPSTV 253
+K++ P +N+ DIL+A+ +++T S +
Sbjct: 175 YVKVILPSNINVKDILEADNILITESAI 202
>gi|421078694|ref|ZP_15539644.1| ribosomal protein L4/L1e [Pelosinus fermentans JBW45]
gi|392523170|gb|EIW46346.1| ribosomal protein L4/L1e [Pelosinus fermentans JBW45]
Length = 209
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + TG K GE L+ + AV+H+A++ + ++R GTAST TRG VRGGGRK
Sbjct: 4 VAVYDITGAKTGELELNDSVFGVEVNEAVLHQAVVMQLASQRLGTASTKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGG FGP+PR ++ ++ +K++RLAI +A+ +
Sbjct: 64 PWKQKGTGRARAGSTRSPIWVGGGTTFGPQPRSYAFRMPRKQRRLAIKSALTAKLQDGEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKML-T 231
+VV+ F+ PKTK I + G D K + ++ EV ENVEKS+RNI +K +
Sbjct: 124 VVVDSIT--FDAPKTKNVINMLS--GFDAANKKSLIITGEVVENVEKSARNIPGVKAIPA 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+LN++D+L + + +T +
Sbjct: 180 SSSLNVYDLLYHDKVFVTKEAI 201
>gi|226323011|ref|ZP_03798529.1| hypothetical protein COPCOM_00783 [Coprococcus comes ATCC 27758]
gi|225208578|gb|EEG90932.1| 50S ribosomal protein L4 [Coprococcus comes ATCC 27758]
Length = 206
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 5/209 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A+++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKE+R A+ +A+ S +
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKLNKKERRAALKSALTSRVEEK 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E + F+ KTK+F + + + KA ++ + ++N E S+RNI +K
Sbjct: 122 KFIVVDEIN--FDEIKTKKFQDVLNNLSVS---KALVVLEDGNKNAELSARNIADVKTAK 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N++DIL T++ T + V + Y
Sbjct: 177 TNTINVYDILKYNTVIATKAAVQAIEEVY 205
>gi|410454388|ref|ZP_11308327.1| 50S ribosomal protein L4 [Bacillus bataviensis LMG 21833]
gi|409932203|gb|EKN69170.1| 50S ribosomal protein L4 [Bacillus bataviensis LMG 21833]
Length = 207
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G ++GE L+ + + V+ A++ + R+GT T R EVRGGGRK
Sbjct: 4 VALLNQNGSQVGEIELNEAVFGIEPNQHVLFEAIVMQRASLRQGTHKTKIRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVLEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E FE PKTKEF + GL ++KA + ++ ENV S+RNI + ++T
Sbjct: 124 LVLESL--AFEAPKTKEFKSVL--GGLSVEKKALIVTADLDENVALSARNIPGVTVVTAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+++ + L++T + V+
Sbjct: 180 GINVLDVVNHDQLIMTKAAVE 200
>gi|365174458|ref|ZP_09361906.1| 50S ribosomal protein L4 [Synergistes sp. 3_1_syn1]
gi|363615014|gb|EHL66486.1| 50S ribosomal protein L4 [Synergistes sp. 3_1_syn1]
Length = 207
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 6/206 (2%)
Query: 57 LSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++F GE IGE L D AP A+ H+ ++ + N R GT +T RG+VRGGG+KP+
Sbjct: 7 VNFKGEVIGEVTLSDAVFGAPVHVPAM-HQVVVAHLANCRVGTHNTKDRGDVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R+PL GGGV GP PRD+ K+NKK +RLAI +A+ AEN +V
Sbjct: 66 RQKHTGRARAGSSRSPLWVGGGVAHGPHPRDYHQKVNKKVRRLAIRSALTLKVQAENMLV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ F E PKTK IE + +K ++ E + V KS+ NI + ++
Sbjct: 126 IDSFG--LETPKTKSMIEFFA--AVQSGKKPLLVLHETNMAVVKSAANIPGAYVQHVDSV 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L+ + L+ TP V L +G
Sbjct: 182 NVYDLLNHDQLIATPEAVKKLEEVFG 207
>gi|374603260|ref|ZP_09676242.1| 50S ribosomal protein L4 [Paenibacillus dendritiformis C454]
gi|374391129|gb|EHQ62469.1| 50S ribosomal protein L4 [Paenibacillus dendritiformis C454]
Length = 207
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + + V+H A++ + + R+GT TR EV GGGRK
Sbjct: 4 VAVYNISGAQVGEIELADTVFGIEPNKHVLHDAVVMQLASMRQGTHKVKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A++S AE
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVLAEQI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF + +D +KA +V E ++NV S+RNI ++K++
Sbjct: 124 IVLDQLT--MNAPKTKEFAAILNNLKVD--RKALVVVPEYNDNVALSARNIPSVKLVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N++D+L E L++T V
Sbjct: 180 GVNVYDVLRHEKLIITKDAVQ 200
>gi|325294397|ref|YP_004280911.1| 50S ribosomal protein L4 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064845|gb|ADY72852.1| ribosomal protein L4/L1e [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 208
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 3/206 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ +++G + + A + V + + +RRGT ST TRGEVRGGG+K
Sbjct: 3 IKVVNAANQEVGTVTIKDEIANAPIKKHAVWETVKWQLAKRRRGTHSTKTRGEVRGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GPKPRD+ + KK +++A+ + +A N
Sbjct: 63 PWPQKHTGRARQGSIRAPQWVGGGVVHGPKPRDYYYPLPKKVRKVALRSVVAGRLQEGNL 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVVE+F FE+PKTK+ IE +R GL+ +K +V E+ EN KS RN+ +K+L
Sbjct: 123 IVVEDFT--FEKPKTKQAIEFLRNLGLE-NEKVLIVVPELEENTYKSFRNLPNVKLLEIE 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGR 259
LN++D+L + + ST+ L R
Sbjct: 180 GLNVYDMLCYDKCIFFKSTLPKLEER 205
>gi|284049256|ref|YP_003399595.1| 50S ribosomal protein L4 [Acidaminococcus fermentans DSM 20731]
gi|283953477|gb|ADB48280.1| ribosomal protein L4/L1e [Acidaminococcus fermentans DSM 20731]
Length = 209
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 112/174 (64%), Gaps = 5/174 (2%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
AVVH+A++ N+R+GT +T TRG VRGGGRKP+ QK TGRAR GS R+PL GGG VF
Sbjct: 32 AVVHQAVVMQQANERQGTHATKTRGMVRGGGRKPWKQKGTGRARAGSVRSPLWVGGGTVF 91
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR + + +K +RLAI A+++ A +VV+ F+ PKTK+ + + G
Sbjct: 92 GPAPRSHAKDMPRKARRLAIRCALSAKVAEGALVVVDNL--TFDAPKTKDAVAMLT--GF 147
Query: 201 DPKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ K ++ + +ENVEKSSRNI +K L+ LN++DIL+AE ++L V
Sbjct: 148 EAADKKALIITDGENENVEKSSRNIEKVKALSNDCLNVYDILNAEKVLLAKDAV 201
>gi|392961451|ref|ZP_10326909.1| ribosomal protein L4/L1e [Pelosinus fermentans DSM 17108]
gi|421056311|ref|ZP_15519238.1| ribosomal protein L4/L1e [Pelosinus fermentans B4]
gi|421058315|ref|ZP_15521027.1| ribosomal protein L4/L1e [Pelosinus fermentans B3]
gi|421064621|ref|ZP_15526482.1| ribosomal protein L4/L1e [Pelosinus fermentans A12]
gi|421072710|ref|ZP_15533814.1| ribosomal protein L4/L1e [Pelosinus fermentans A11]
gi|392438727|gb|EIW16550.1| ribosomal protein L4/L1e [Pelosinus fermentans B4]
gi|392445137|gb|EIW22469.1| ribosomal protein L4/L1e [Pelosinus fermentans A11]
gi|392453708|gb|EIW30571.1| ribosomal protein L4/L1e [Pelosinus fermentans DSM 17108]
gi|392460781|gb|EIW37043.1| ribosomal protein L4/L1e [Pelosinus fermentans A12]
gi|392461124|gb|EIW37352.1| ribosomal protein L4/L1e [Pelosinus fermentans B3]
Length = 209
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + TG K GE L+ + AV+H+A++ + ++R GTAST TRG VRGGGRK
Sbjct: 4 VAVYDITGAKTGELELNDSVFGVEVNEAVLHQAVVMQLASQRLGTASTKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGG FGP+PR ++ ++ +K++RLAI +A+ +
Sbjct: 64 PWKQKGTGRARAGSTRSPIWVGGGTTFGPQPRSYAFRMPRKQRRLAIKSALTAKLQDGEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKML-T 231
+VV+ F+ PKTK I + G D K + ++ EV ENVEKS+RNI +K +
Sbjct: 124 VVVDSI--AFDAPKTKNVINMLS--GFDAANKKSLIITGEVIENVEKSARNIPGVKAIPA 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+LN++D+L + + +T +
Sbjct: 180 SSSLNVYDLLYHDKVFVTKEAI 201
>gi|118411059|ref|YP_874454.1| 50S ribosomal protein L4 [Phaeodactylum tricornutum]
gi|125987629|sp|A0T0H9.1|RK4_PHATC RecName: Full=50S ribosomal protein L4, chloroplastic
gi|116739806|gb|ABK20677.1| 50S ribosomal protein L4 [Phaeodactylum tricornutum]
Length = 215
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 116/179 (64%), Gaps = 2/179 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VH+ LI ++R+ T+S+ TR EVRGGGRKP+ QK TG+AR GSNR+PL GGGV+FG
Sbjct: 37 LVHKDLIRHFGSQRQATSSSKTRSEVRGGGRKPWRQKGTGKARAGSNRSPLWKGGGVIFG 96
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKP+ S+K+NKKE++LA+ T I + N +++E + PKTK F++ + ++
Sbjct: 97 PKPKKISLKLNKKERQLALQTLIYN--KKNNILIIENLETGMTEPKTKAFVKICQDCQIN 154
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+QK +V + + ++ +++N+ +++L +LN IL A ++LT + ++ + Y
Sbjct: 155 LEQKVLLVVTDKTSVLKLATQNLKNVELLAASSLNTLSILKARQIILTSAAINHIKESY 213
>gi|333980408|ref|YP_004518353.1| 50S ribosomal protein L4 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823889|gb|AEG16552.1| ribosomal protein L4/L1e [Desulfotomaculum kuznetsovii DSM 6115]
Length = 208
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++GE +L +V+H A++ + +R GT T TR EVRGGGRK
Sbjct: 4 VAVYNINGDQVGEIHLRDDVFGVPVHMSVLHDAVVWQLAGRRLGTHDTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG+VFGP PRD+S ++ +K +RLA+ +A+ SA +
Sbjct: 64 PWRQKGTGRARHGSIRSPLWRKGGIVFGPHPRDYSYRLPRKVRRLAMKSAL-SAKVQDGK 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV E D K E+P+TK+ + + L KA + + ENV KS+RNI +K +
Sbjct: 123 IVVLE-DLKLEQPRTKDMVRILG--NLKVNDKALVVTADREENVIKSARNIPGIKPMAAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++D+L TLV+T V
Sbjct: 180 GLNVYDLLAHNTLVITKDAV 199
>gi|189424411|ref|YP_001951588.1| 50S ribosomal protein L4 [Geobacter lovleyi SZ]
gi|226730669|sp|B3E7T6.1|RL4_GEOLS RecName: Full=50S ribosomal protein L4
gi|189420670|gb|ACD95068.1| ribosomal protein L4/L1e [Geobacter lovleyi SZ]
Length = 206
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 123/205 (60%), Gaps = 5/205 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + EKIGE LD + A + ++H+AL + N+R GT T TR EV GGG+K
Sbjct: 4 IALYNMNREKIGEVALDEQIFAAEVKEPLIHQALKVQLANRRAGTVKTKTRAEVSGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+G +R P PGGG VFGP+P+ +++ INKK ++ A+ + ++ +E
Sbjct: 64 PFKQKGTGNARQGCSRAPQYPGGGTVFGPQPKTYNLGINKKARKAALRSLLSMQLKSEKI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+++ + F + TK+F M+++ L+ ++ + E S N+ SSRN+ +K+L
Sbjct: 124 TVLDQIE--FAKISTKDFAGFMKKFDLE---RSLIITEEPSTNLALSSRNVPYVKLLKAD 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNG 258
LN+FD+L + +V+T V + G
Sbjct: 179 GLNVFDVLKYQNIVMTEGAVRLVEG 203
>gi|323141357|ref|ZP_08076248.1| 50S ribosomal protein L4 [Phascolarctobacterium succinatutens YIT
12067]
gi|322414106|gb|EFY04934.1| 50S ribosomal protein L4 [Phascolarctobacterium succinatutens YIT
12067]
Length = 211
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 124/206 (60%), Gaps = 5/206 (2%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
L L + +G + GE L+ + AVVH+A++ + N+R+GT++T TR VRG
Sbjct: 3 LMPKLSVYDLSGAQTGEIELNDSVFGAEFNEAVVHQAVVMQLANQRQGTSATKTRAMVRG 62
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP+ QK TGRAR GSNR+P+ GGG FGP+PR ++ K+ +K +RLA+ A+++ A
Sbjct: 63 GGRKPWKQKGTGRARCGSNRSPVWVGGGTTFGPQPRSYAKKMPRKARRLALCCALSAKVA 122
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRW-GLDPKQKATFLVMEVSENVEKSSRNIGTLK 228
A +VVE F+ PKTK+ ++ + +D KA + +ENV S+RN+ +
Sbjct: 123 AGELVVVEGL--AFDAPKTKQVASLLKAFEAVDT--KALLITDGSNENVALSARNMPKVT 178
Query: 229 MLTPRTLNLFDILDAETLVLTPSTVD 254
+T LN FDIL+++ + L V+
Sbjct: 179 TITNMGLNCFDILNSKKVFLAKDAVE 204
>gi|240145877|ref|ZP_04744478.1| ribosomal protein L4/L1 family protein [Roseburia intestinalis
L1-82]
gi|257202026|gb|EEV00311.1| ribosomal protein L4/L1 family protein [Roseburia intestinalis
L1-82]
gi|291535431|emb|CBL08543.1| LSU ribosomal protein L4P [Roseburia intestinalis M50/1]
Length = 206
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + N R+GT TR EVRGGGRK
Sbjct: 4 VAVYNMEGKEVGSLELNDAVFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTHGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVNESKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E K + KTK F++ + + +KA ++ ++ NV KS+ N+ T+K
Sbjct: 124 IVVDEL--KLDSIKTKNFVQVLNNLKV---EKALVVLNDMDTNVIKSASNVPTVKTAQTN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+FD+L +T+V+T V + Y
Sbjct: 179 ELNVFDVLKYDTVVVTKDAVKTIEEVYA 206
>gi|194334860|ref|YP_002016720.1| 50S ribosomal protein L4 [Prosthecochloris aestuarii DSM 271]
gi|226730706|sp|B4S5M6.1|RL4_PROA2 RecName: Full=50S ribosomal protein L4
gi|194312678|gb|ACF47073.1| ribosomal protein L4/L1e [Prosthecochloris aestuarii DSM 271]
Length = 208
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +++ G + GE LD K A + V+ + + + NKR+GT R EVRGGG+
Sbjct: 3 LKVINTAGAETGEVISLDDKVFAAKVSEHAVYLDVKSLLANKRQGTHKVKNRSEVRGGGK 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KPY QK TG AR+GS+R+ L GGG +FGP+P + +K+N+K KRLA +A++S A
Sbjct: 63 KPYRQKGTGHARQGSSRSGLMSGGGSIFGPQPHGYDLKVNRKIKRLARRSALSSKAGEGR 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
IV+E+F FE+ KT++F + ++ GLD K K L+ E +E + +S RNI L +
Sbjct: 123 IIVIEDFT--FEQIKTRQFADILKNLGLDQK-KTLVLLPEHNEIINRSGRNIPVLNIRVA 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
+ +DILD +T+V+ + V
Sbjct: 180 DQASTYDILDCQTVVMQKAAV 200
>gi|225387236|ref|ZP_03757000.1| hypothetical protein CLOSTASPAR_00988 [Clostridium asparagiforme
DSM 15981]
gi|225046654|gb|EEG56900.1| hypothetical protein CLOSTASPAR_00988 [Clostridium asparagiforme
DSM 15981]
Length = 206
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNMEGKEVGSMELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD++I +NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWKGGGVVFAPVPRDYTITLNKKEKRAALKSALTSRVQGG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E KF+ KTK+F M ++ KA ++ + +N S+RNI +K
Sbjct: 122 KFIVVDEL--KFDEIKTKKFQNVMDNLKVN---KALVVLADNDQNAVLSARNIADVKTTQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T+V T + V
Sbjct: 177 VNTMNVYDILKYSTVVATKAAV 198
>gi|239623348|ref|ZP_04666379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522314|gb|EEQ62180.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 206
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I++NKKEKR A+ +A+ S A
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVQANKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E KF+ KTK+F M ++ KA ++ + +N S+RN+ +K
Sbjct: 124 IVVDEL--KFDEIKTKKFQGVMDSLKVN---KALVVLADNDQNTVLSARNVADVKTAQVD 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
++N++DIL T+V T + V
Sbjct: 179 SINVYDILKYNTVVATKAAV 198
>gi|421858368|ref|ZP_16290638.1| ribosomal protein L4 [Paenibacillus popilliae ATCC 14706]
gi|410832047|dbj|GAC41075.1| ribosomal protein L4 [Paenibacillus popilliae ATCC 14706]
Length = 207
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + + V+H A++ + + R+GT TR EV GGGRK
Sbjct: 4 VAVYNISGAQVGEIELADTVFGIEPNKHVLHDAVVMQLASMRQGTHKVKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A++S AE
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVLAEQI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF + +D +KA ++ E ++NV S+RNI ++K++
Sbjct: 124 IVLDQLT--MNAPKTKEFAAILNNLNVD--RKALVVMPEYNDNVALSARNIPSVKLVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N++D+L E L++T V
Sbjct: 180 GVNVYDVLRHEKLIITKDAVQ 200
>gi|153854971|ref|ZP_01996184.1| hypothetical protein DORLON_02190 [Dorea longicatena DSM 13814]
gi|149752468|gb|EDM62399.1| 50S ribosomal protein L4 [Dorea longicatena DSM 13814]
Length = 206
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 122/204 (59%), Gaps = 9/204 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAA--PDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+ + + + G+++G+ +DL A + +VH A+++ + N R+GT TR EV G
Sbjct: 2 ANVSVYNIEGKEVGK--IDLSDAVFGVEVNEHLVHMAVVSQLANNRQGTQKAKTRSEVSG 59
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NK+EKR A+ +A+ S
Sbjct: 60 GGRKPWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKREKRAALKSALTSRVE 119
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
IV++E + FE KTK F ++ LD KA ++ + ++N E S+RNI +K
Sbjct: 120 ENKFIVIDEIN--FEEAKTKNFANILK--NLDV-SKALVVLEDDNKNAELSARNIADVKT 174
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 175 AKTNTINVYDILKYNTVITTKAVV 198
>gi|225571553|ref|ZP_03780549.1| hypothetical protein CLOHYLEM_07651 [Clostridium hylemonae DSM
15053]
gi|225159630|gb|EEG72249.1| hypothetical protein CLOHYLEM_07651 [Clostridium hylemonae DSM
15053]
Length = 206
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A+++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A+ + +
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNKKEKRAALKSALTTKVEEK 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E F+ KTK F ++ LD KA ++ + + N E S+RNI +K
Sbjct: 122 KFIVVDEI--AFDEIKTKNFANVLK--NLDV-SKALVVLEDGNTNAELSARNIADVKTAK 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 177 TNTINVYDILKYNTVIATKAAV 198
>gi|403388277|ref|ZP_10930334.1| 50S ribosomal protein L4 [Clostridium sp. JC122]
Length = 206
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G+ L+ + ++ +H+ ++ + NKR+GT S TR EVRGGG K
Sbjct: 4 IKVFNKEGKEVGDIQLNESIFGAEISKESMHQVVLAQLANKRQGTQSAKTRAEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GG+VF PKPRD+ + I K +R A+ +A+ S A
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRVSIPKSMRRTAMKSALTSKVAENEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E + FE PKTKE I + + +K +V E +ENV KS+RNI + +L
Sbjct: 124 IVIESLE--FEAPKTKEMINVLNAF---EAKKTLIVVAESNENVYKSARNIPGVAVLPVN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DIL E ++T V + Y
Sbjct: 179 NLNVYDILKYEKFMVTKEAVSKIEEVYA 206
>gi|354558441|ref|ZP_08977696.1| ribosomal protein L4/L1e [Desulfitobacterium metallireducens DSM
15288]
gi|353546919|gb|EHC16366.1| ribosomal protein L4/L1e [Desulfitobacterium metallireducens DSM
15288]
Length = 207
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G +GE L+ + V+H A++ + ++RRGT+STL RGEVRGGGRK
Sbjct: 4 VQVVNMQGSPVGEIELNEYVFGIEPNAHVLHSAVVAQLASQRRGTSSTLLRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG V+FGPKPRD+ + KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARAGSIRSPLFRGGAVLFGPKPRDYGFSLPKKVRRLALRSALSSKVNEQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ KT+E ++ ++ L+ +KA + E+++ V S+RNI +K
Sbjct: 124 IVLEDLS--LTEAKTREMVKVLK--ALNADKKALIVTDELNDTVVLSARNIEGVKATQVE 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L + +V+T + V
Sbjct: 180 GMNVYDLLKHDVIVMTKAAV 199
>gi|283796558|ref|ZP_06345711.1| ribosomal protein L4/L1 family protein [Clostridium sp. M62/1]
gi|291075972|gb|EFE13336.1| 50S ribosomal protein L4 [Clostridium sp. M62/1]
gi|295092548|emb|CBK78655.1| LSU ribosomal protein L4P [Clostridium cf. saccharolyticum K10]
Length = 204
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 7/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNIEGNEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD++I++NKKEKRLA+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYTIRLNKKEKRLALKSALTSRVNENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E F KTK+F E ++ ++ LV+ N S+RNI +K +
Sbjct: 124 IVVDELS--FAEIKTKKFAEVLKNLKVEKA-----LVVGADANAALSARNIPAVKTASVN 176
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL T+V T + V
Sbjct: 177 TINVYDILKYNTVVATKAAV 196
>gi|328725484|ref|XP_003248496.1| PREDICTED: 50S ribosomal protein L4-like [Acyrthosiphon pisum]
Length = 267
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 4/207 (1%)
Query: 48 SQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEV 107
+ + + + +L G K G L+ + + V+ A+ + R+GT + R V
Sbjct: 58 NNIMANIDVLKVDGSKSGSIELNDSVFGIEPNQHVLFEAVNLQRASLRQGTHAVKNRSAV 117
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
RGGGRKP+ QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++S
Sbjct: 118 RGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSSK 177
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
+ V+E F+ F+ PKTKEF M L+ +K F+V V NVE S+RNI +
Sbjct: 178 VSGNELTVLEAFN--FDAPKTKEFKNVMSN--LELSKKVLFIVDTVDSNVELSARNIPGV 233
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVD 254
K++ ++LN+ DILD+ +V+T + VD
Sbjct: 234 KVIDAQSLNVLDILDSSKVVITKAAVD 260
>gi|427413155|ref|ZP_18903347.1| 50S ribosomal protein L4 [Veillonella ratti ACS-216-V-Col6b]
gi|425715971|gb|EKU78957.1| 50S ribosomal protein L4 [Veillonella ratti ACS-216-V-Col6b]
Length = 207
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ +G K+GE L+ + A + AV+H+A++ + N+R GT +T TRG VRGGGRKP+ Q
Sbjct: 8 NMSGAKVGEIQLNDEVFAVEVNEAVMHQAVVRQLSNERLGTHATKTRGLVRGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGG VFGP+PR + + +K +RLA+ +A++ IV++
Sbjct: 68 KGTGRARVGSTRSPLWVGGGTVFGPQPRSYYKAMPRKARRLAVKSALSDKVNNNELIVLD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
E PKTKE + + + + + + E NVE+S+RNI +K L +N+
Sbjct: 128 ELT--LAAPKTKEVLNILNNFNVGDAK--VLFITESDINVERSARNIQGVKALAWEGMNI 183
Query: 238 FDILDAETLVLTPSTV 253
FD+L + L +T V
Sbjct: 184 FDLLHYDKLFITEGAV 199
>gi|347543074|ref|YP_004857712.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986111|dbj|BAK81786.1| 50S ribosomal protein L4 [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 208
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 6/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + + + GEK+GE L + + + VH+ ++ + NKR+GT S TR EV GGG
Sbjct: 2 SKVEVYNICGEKVGELELLKEVFDVEIKKYAVHQVVVAQLANKRQGTHSAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR+GS R P GGVVF PKPRD+ + I+K +R AI++ + S +
Sbjct: 62 KKPWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYRMSISKTLRRAAITSVLTSKLKEK 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKML 230
N +V+ E F+ PKTKE ++ M +D LV E S+ NV +S N+ ++K+L
Sbjct: 122 NLLVLNEIS--FDFPKTKEMVKIMNNLKIDSNM---LLVTETSDKNVYRSGTNLQSVKVL 176
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+N++D+L + LV+T + L Y
Sbjct: 177 PVNNINVYDLLKYDKLVITQGALKKLEEVY 206
>gi|110803426|ref|YP_699662.1| 50S ribosomal protein L4 [Clostridium perfringens SM101]
gi|122956495|sp|Q0SQE5.1|RL4_CLOPS RecName: Full=50S ribosomal protein L4
gi|110683927|gb|ABG87297.1| 50S ribosomal protein L4 [Clostridium perfringens SM101]
Length = 204
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 126/201 (62%), Gaps = 7/201 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G+ L+ + + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ + I K +++A+++A+ S A + +V+E+ +
Sbjct: 71 GRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVA--DMVVLEDLN 128
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTKE ++ + + +K + EV+ENV KS+RNI + ++ +N++D+
Sbjct: 129 --FEAPKTKEAVKMLNAF---EAKKTLIITAEVNENVYKSARNIEGVTVMPVNNINVYDL 183
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L+ +TL++T V+ + Y
Sbjct: 184 LNCKTLMITKEAVNKIEEVYA 204
>gi|255282606|ref|ZP_05347161.1| ribosomal protein L4/L1 family protein [Bryantella formatexigens
DSM 14469]
gi|255266899|gb|EET60104.1| 50S ribosomal protein L4 [Marvinbryantia formatexigens DSM 14469]
Length = 206
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L + +VH A+++ + N R+GT TR EV GGG
Sbjct: 2 ANVSVYNMEGKEVGTMELSDAVFGVEINEHLVHMAVLSQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWKGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVQEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+V++E K + KTK + ++ +KA ++ E ENV S+RNI +K
Sbjct: 122 KLVVLDEL--KLDAIKTKSMVNVLKNVN---AEKALVVLNENDENVVMSARNIAGVKTAL 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N++DIL TLV+T + + + Y
Sbjct: 177 TNTINVYDILKYNTLVMTKAAAEAIEEVY 205
>gi|431792470|ref|YP_007219375.1| 50S ribosomal protein L4 [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782696|gb|AGA67979.1| 50S ribosomal protein L4, bacterial/organelle [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 207
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+++ G +GE L+ + V+H+A++ + ++RRGT STL RGEVRGGGRKP+
Sbjct: 6 VVNMQGSPVGELELNEYVFGIEPNVHVLHQAVVGQLASQRRGTHSTLLRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GG ++FGPKPR + + KK +RLA+ +A++S + IV
Sbjct: 66 RQKGTGRARAGSIRSPLWRGGAILFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQQLIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ KT+E ++ ++ L+ +KA + E E +++++RNI +K +
Sbjct: 126 LEDLS--LSEAKTREMVKVLK--ALNVSKKALLVTDEFIEAIDRTARNIEGVKTTPVEGM 181
Query: 236 NLFDILDAETLVLTPSTV 253
N++D+L+A+ +V+T + V
Sbjct: 182 NVYDLLNADVIVMTKAAV 199
>gi|295093644|emb|CBK82735.1| LSU ribosomal protein L4P [Coprococcus sp. ART55/1]
Length = 206
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 5/180 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+A++ + N R+GT S TR EV GGGRKP+ QK TG AR+GS R+P GGGVVF
Sbjct: 32 IMHKAVVGQLANNRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQWTGGGVVFA 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S+K+NKKEK+LA+ +A++S A +VV++ D + KT F + + +
Sbjct: 92 PKPRDYSVKMNKKEKQLAMKSALSSKVAENKLVVVDKLD--LQEAKTSVFAKILAKLSAP 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
KA + + + NV S+ NI T+K +L+++DIL E LVLT V + Y
Sbjct: 150 ---KALVVTKDKNNNVVLSANNIPTVKTTVANSLSVYDILKYEKLVLTKEAVAAIEEVYA 206
>gi|357058918|ref|ZP_09119764.1| 50S ribosomal protein L4/L1 [Selenomonas infelix ATCC 43532]
gi|355373264|gb|EHG20585.1| 50S ribosomal protein L4/L1 [Selenomonas infelix ATCC 43532]
Length = 207
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + ++GE L + + ++H+A++ + ++R GT +T TRG VRGGGRK
Sbjct: 4 VAVYDMSHNQVGEISLSDEFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ D FE PKTK ++ + +G++ K+ F+ + + NVE+S+ NI +K +T R
Sbjct: 124 IVLDQLD--FEAPKTKAAVKLLSDFGVNA--KSLFITADEAVNVERSTSNIPGVKAITAR 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++DIL + L +T +
Sbjct: 180 GINVYDILHHDKLFITKDAI 199
>gi|402813925|ref|ZP_10863519.1| 50S ribosomal protein L4 [Paenibacillus alvei DSM 29]
gi|402507772|gb|EJW18293.1| 50S ribosomal protein L4 [Paenibacillus alvei DSM 29]
Length = 207
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + + V+H A++ + + R+GT R EV GGGRK
Sbjct: 4 VAVYNMSGAQVGEIELSDSVFGIEPNKHVLHDAVVMQLASMRQGTHKVKNRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A++S AE
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVLAEQI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ PKTKEF + +D +KA ++ E ++NV S+RNI ++K++
Sbjct: 124 IVIDSL--ALNTPKTKEFAAVLNNLKVD--RKALVVLPEYNDNVALSARNIPSVKLVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L E L++T V
Sbjct: 180 GVNVYDVLRHEKLIITKDAV 199
>gi|291537925|emb|CBL11036.1| LSU ribosomal protein L4P [Roseburia intestinalis XB6B4]
Length = 198
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G L+ + +VH A++ + N R+GT TR EVRGGGRKP+ QK T
Sbjct: 3 GKEVGSLELNDAVFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVRGGGRKPWRQKGT 62
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
G AR+GS R P GGVVF P PRD+S K+NKKEKR A+ +A+ S IVV+E
Sbjct: 63 GHARQGSTRAPQWTHGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVNESKFIVVDEL- 121
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
K + KTK F++ + + +KA ++ ++ NV KS+ N+ T+K LN+FD+
Sbjct: 122 -KLDSIKTKNFVQVLNNLKV---EKALVVLNDMDTNVIKSASNVPTVKTAQTNELNVFDV 177
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L +T+V+T V + Y
Sbjct: 178 LKYDTVVVTKDAVKTIEEVYA 198
>gi|326792606|ref|YP_004310427.1| 50S ribosomal protein L4/L1e [Clostridium lentocellum DSM 5427]
gi|326543370|gb|ADZ85229.1| ribosomal protein L4/L1e [Clostridium lentocellum DSM 5427]
Length = 207
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 122/211 (57%), Gaps = 6/211 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ TG ++GE L+ A + +VH+A++ + N+R+GT S TR EVRGGG
Sbjct: 2 AKVAVLNMTGAQVGEVELNDSIFAVEVKEHLVHQAVVAHLANRRQGTQSAKTRAEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R GGGV F PKPR++SIK+N KE+RLA+ +A+ S
Sbjct: 62 RKPWKQKGTGRARQGSIRAVQWVGGGVAFAPKPRNYSIKVNAKERRLALKSALTSRVNES 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKML 230
IV++ + KTK + L+ KA + E S+NV S++NI +K
Sbjct: 122 KFIVLDSLE--LAEIKTKAMANVLEALKLN---KALIVTEGEASKNVMLSAKNIQGIKTA 176
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++DIL +T V+T ++ + Y
Sbjct: 177 AVNNINVYDILKYDTFVVTKDALNKIEEVYA 207
>gi|331004122|ref|ZP_08327602.1| 50S ribosomal protein L4 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|402312693|ref|ZP_10831617.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium ICM7]
gi|404483000|ref|ZP_11018225.1| 50S ribosomal protein L4 [Clostridiales bacterium OBRC5-5]
gi|330411532|gb|EGG90942.1| 50S ribosomal protein L4 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|400369151|gb|EJP22154.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium ICM7]
gi|404344090|gb|EJZ70449.1| 50S ribosomal protein L4 [Clostridiales bacterium OBRC5-5]
Length = 206
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I +NKKEKR+A+ +A+ S
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV++F KTK+ + + + +KA + E +N S RNI +K +P+
Sbjct: 124 IVVDDF--AMSEIKTKKMQQTLNNLNV---KKALVVCAENEKNTVLSVRNIYGVKAASPK 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N++DIL T+V + V + Y
Sbjct: 179 TINVYDILKYNTVVASKDAVKTIEEVY 205
>gi|293375390|ref|ZP_06621671.1| ribosomal protein L4/L1 family protein [Turicibacter sanguinis
PC909]
gi|325844472|ref|ZP_08168199.1| 50S ribosomal protein L4 [Turicibacter sp. HGF1]
gi|292645943|gb|EFF63972.1| ribosomal protein L4/L1 family protein [Turicibacter sanguinis
PC909]
gi|325489146|gb|EGC91530.1| 50S ribosomal protein L4 [Turicibacter sp. HGF1]
Length = 207
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G ++GE L+ + + + A+I + R+GT T TR EVRGGGRKP+ QK T
Sbjct: 11 GAQVGEIVLNEAIFGIEPHKQAMFDAVIMQRASMRQGTHKTKTRTEVRGGGRKPWKQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGG+VFGP PR ++ K+NKK +RLA+ +A+A+ +V+++
Sbjct: 71 GRARQGSIRAPQWRGGGIVFGPVPRSYAYKLNKKVRRLALKSALATKVVENEIVVLDQLV 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK+ I + L+ KA + E + VE S+RNI +K+LT LN+ D+
Sbjct: 131 --FEAPKTKQMINVL--GALNVTSKALVVTAEENAAVELSTRNIPGVKVLTVSQLNVLDL 186
Query: 241 LDAETLVLTPSTV 253
LDA LV+T V
Sbjct: 187 LDATKLVITQDAV 199
>gi|403382869|ref|ZP_10924926.1| 50S ribosomal protein L4 [Paenibacillus sp. JC66]
Length = 207
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +GE++GE L + + V+H A++ + R+GT R EVRGGGRK
Sbjct: 4 VALYNISGEQVGELELSEAVFGIEPNKHVLHDAVVMQQASLRQGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR ++ K+ KK +RLAI +A++S
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGIVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIENEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + +PKTKE + ++ +D +KA + E ENV S+RNI +K +T
Sbjct: 124 IVLDQL--QLSQPKTKEIVAMLKNLNVD--RKALVVAPEFDENVALSARNIPGVKFVTAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLVHDKLIITKEAVQ 200
>gi|315652353|ref|ZP_07905345.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485476|gb|EFU75866.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum DSM 3986]
Length = 206
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I +NKKEKR+A+ +A+ S
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV++F KTK+ + + + +KA + E +N S RNI +K +P+
Sbjct: 124 IVVDDFS--MGEIKTKKMQQTLNNLNV---KKALVVCAENEKNTVLSVRNIYGVKAASPK 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N++DIL T+V + V + Y
Sbjct: 179 TINVYDILKYNTVVASKDAVKTIEEVY 205
>gi|154498884|ref|ZP_02037262.1| hypothetical protein BACCAP_02876 [Bacteroides capillosus ATCC
29799]
gi|150271724|gb|EDM98950.1| 50S ribosomal protein L4 [Pseudoflavonifractor capillosus ATCC
29799]
Length = 206
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ TG+K+GE L + +VVH A+ + N R+GT S LTR EV GGG KP+
Sbjct: 6 VVDMTGKKVGEVDLSDAIFGIEPNVSVVHEAVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGVVF PKPRD+S +NKK KRLA+ +A+++ AA N IV
Sbjct: 66 RQKGTGRARQGSTRAPQWTHGGVVFAPKPRDYSYTLNKKVKRLALKSALSAKAAEGNVIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ + + KTK + G +KA + EV+ENV S+RNI + T + L
Sbjct: 126 VDGLN--LDAVKTKNMAAFL---GAVESKKAVLVTNEVNENVVLSARNIPGVVTTTAKLL 180
Query: 236 NLFDILDAETLVL 248
+++DI++A ++
Sbjct: 181 SVYDIVNANQFIV 193
>gi|374578947|ref|ZP_09652041.1| 50S ribosomal protein L4, bacterial/organelle [Desulfosporosinus
youngiae DSM 17734]
gi|374415029|gb|EHQ87464.1| 50S ribosomal protein L4, bacterial/organelle [Desulfosporosinus
youngiae DSM 17734]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 122/202 (60%), Gaps = 8/202 (3%)
Query: 54 LPILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +L+ G +GE L ++ P+ V+H A+++ + +RRGT S L RGEVRGGG
Sbjct: 4 VQVLNMQGAAVGEIELSENVFGITPNVH--VLHSAVVSQLAGERRGTQSALLRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R+PL GGG++F PKPR + K+ KK +RLA+ +A++S +
Sbjct: 62 RKPWRQKGTGRARSGSTRSPLWRGGGIIFAPKPRKYGFKLPKKVRRLALYSALSSKVMEQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++ KT+E ++ ++ +D +KA ++ E V +S+RNI +K +
Sbjct: 122 QLIVLDALS--ISEAKTREIVKVLKALNID--KKAMIVMDNADEAVLRSARNIEGVKAID 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N++D+L + LV+T V
Sbjct: 178 VAGMNVYDLLHHDILVMTKDAV 199
>gi|365873446|ref|ZP_09412979.1| 50S ribosomal protein L4, bacterial/organelle [Thermanaerovibrio
velox DSM 12556]
gi|363983533|gb|EHM09740.1| 50S ribosomal protein L4, bacterial/organelle [Thermanaerovibrio
velox DSM 12556]
Length = 208
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 116/197 (58%), Gaps = 4/197 (2%)
Query: 57 LSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYS 116
++F GE IGE L +H+ ++ + N R GT T RG+V GGGRKP+
Sbjct: 7 VNFNGEVIGEVELSEAVFGAPVHVPAMHQVVVAHLANCRVGTHDTKDRGDVSGGGRKPWR 66
Query: 117 QKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVV 176
QK TGRAR+GS R+PL GGGV GP PRD+ K+NKK +RLA+ +A+ A +N +V+
Sbjct: 67 QKHTGRARQGSIRSPLWVGGGVAHGPHPRDYHQKVNKKVRRLALRSALTLKAKEDNMLVI 126
Query: 177 EEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLN 236
+ F + E PKTK +E + + + +K +V + NV KS+ NI +L +LN
Sbjct: 127 DAF--QMEAPKTKVMLEFLNK--VQAGKKPLLVVNDKDPNVRKSAGNIPGAMVLHVDSLN 182
Query: 237 LFDILDAETLVLTPSTV 253
++DIL+ + L++T V
Sbjct: 183 VYDILNHDRLIVTADAV 199
>gi|289449461|ref|YP_003475783.1| 50S ribosomal protein L4 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184008|gb|ADC90433.1| 50S ribosomal protein L4 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 127/211 (60%), Gaps = 8/211 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G IG+ L + ++V+H+ + + N+R+GT ST TR EV GGG
Sbjct: 2 AKVDVYNLDGAVIGQIELSDAVFGIEPNQSVMHQVVKNQLANRRQGTGSTKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
++P+ QK TGRAR GS R+ GGG++FGPKPRD+ ++KK +RLAI +A+++ +
Sbjct: 62 KRPWRQKGTGRARHGSTRSAQYVGGGIIFGPKPRDYHYTVSKKVRRLAIKSALSTKLQEK 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENV--EKSSRNIGTLKM 229
IVVE F+ KTK F+ A+++ + + LV+E +NV E ++RNI +++
Sbjct: 122 QLIVVENFE--LAEAKTKNFVTALKKLNVTDR----VLVVENEKNVNLELAARNIAKVQL 175
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N+FD+L E L+++ + V+ + Y
Sbjct: 176 SRANTINVFDLLKNEVLLISKAAVEKIQEVY 206
>gi|134298094|ref|YP_001111590.1| 50S ribosomal protein L4 [Desulfotomaculum reducens MI-1]
gi|172044220|sp|A4J112.1|RL4_DESRM RecName: Full=50S ribosomal protein L4
gi|134050794|gb|ABO48765.1| LSU ribosomal protein L4P [Desulfotomaculum reducens MI-1]
Length = 206
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE++GE L + + V+H A+ + N+R+GT T TR EVRGGGRK
Sbjct: 4 VALYNINGEQVGEVELKDEVFGIEPHEHVMHEAVNMQLANQRQGTHDTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS+R+P+ GG+VFGP PRD++I + KK +RLA+ +A++S +N
Sbjct: 64 PWRQKGTGRARAGSSRSPIWRKGGIVFGPHPRDYAISLPKKVRRLALKSALSSKVLDQNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + PKTK+ + + D KA + NVEKS+RNI +K L
Sbjct: 124 IVLDSL--TMDAPKTKDMVRILGNLKAD---KALVVTATRDLNVEKSARNIEGVKPLKAD 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L LV+T V
Sbjct: 179 GVNVYDLLKYTKLVITKDAV 198
>gi|167748431|ref|ZP_02420558.1| hypothetical protein ANACAC_03175 [Anaerostipes caccae DSM 14662]
gi|317472036|ref|ZP_07931368.1| ribosomal protein L4/L1 family protein [Anaerostipes sp. 3_2_56FAA]
gi|167652423|gb|EDR96552.1| 50S ribosomal protein L4 [Anaerostipes caccae DSM 14662]
gi|316900440|gb|EFV22422.1| ribosomal protein L4/L1 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 206
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 123/202 (60%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ G ++ + L+ + +VH A+++ + N R+GT S TR EVRGGG
Sbjct: 2 AEVSVLNMEGNEVEKLNLNDGIFGVEINEHLVHLAVVSQLANNRQGTQSAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF PKPR++S K+NKKE+RLA+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWTGGGVVFAPKPREYSKKLNKKERRLALKSALTSRVNEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+EF KF+ KTK + + +KA ++ + ++N+ S+RNI +K
Sbjct: 122 KFIVVDEF--KFDDVKTKNVANMLNNLNV---KKALVIMGDKNDNLILSARNIPGVKTAL 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL +T+V++ V
Sbjct: 177 TSTINVYDILKYDTVVVSKEAV 198
>gi|366163748|ref|ZP_09463503.1| 50S ribosomal protein L4 [Acetivibrio cellulolyticus CD2]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + G+ +G+ L D + VVH+A++ + NKR+GT ST T+ EVRGGG K
Sbjct: 4 VDLYDMNGKVVGDIDLSEAVFGIDVNKEVVHQAVVNQLANKRQGTQSTKTKSEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GG+V GPKPR + + KK KRLA+ + ++S +
Sbjct: 64 PWKQKGTGRARQGSIRSAQWIKGGIVLGPKPRSYRYTLPKKVKRLALKSVLSSKVSENEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + F++ KTK+ E ++ +D A L+ + +ENVE+S+ NI +K L
Sbjct: 124 IVLDKLN--FDKIKTKQMAEVLKNLKIDG--TAVILIADKNENVERSANNIPGVKTLLAN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DI+ L++T V
Sbjct: 180 TINVYDIVKHSKLIITKDAV 199
>gi|334128945|ref|ZP_08502821.1| 50S ribosomal protein L4 [Centipeda periodontii DSM 2778]
gi|429737078|ref|ZP_19270951.1| 50S ribosomal protein L4 [Selenomonas sp. oral taxon 138 str.
F0429]
gi|333385972|gb|EGK57197.1| 50S ribosomal protein L4 [Centipeda periodontii DSM 2778]
gi|429153518|gb|EKX96300.1| 50S ribosomal protein L4 [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + ++GE L+ + + ++H+A++ + ++R GT +T TRG VRGGGRK
Sbjct: 4 VAVYDMSHNQVGEISLNDEFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ D FE PKTK ++ + +G++ K+ F+ + + NVE+S+ NI +K ++ R
Sbjct: 124 IVLDQLD--FEAPKTKAAVKLLSDFGVNA--KSLFITADEAVNVERSTSNIPGVKAISAR 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++DIL + L +T +
Sbjct: 180 GINVYDILHHDKLFITKDAI 199
>gi|323483300|ref|ZP_08088690.1| hypothetical protein HMPREF9474_00439 [Clostridium symbiosum
WAL-14163]
gi|323691202|ref|ZP_08105478.1| ribosomal protein L4/L1 family protein [Clostridium symbiosum
WAL-14673]
gi|355626527|ref|ZP_09048802.1| 50S ribosomal protein L4 [Clostridium sp. 7_3_54FAA]
gi|323403398|gb|EGA95706.1| hypothetical protein HMPREF9474_00439 [Clostridium symbiosum
WAL-14163]
gi|323504721|gb|EGB20507.1| ribosomal protein L4/L1 family protein [Clostridium symbiosum
WAL-14673]
gi|354820847|gb|EHF05252.1| 50S ribosomal protein L4 [Clostridium sp. 7_3_54FAA]
Length = 206
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNIEGNEVGTLELNDSVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I++NKKEKR A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVNENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ + F+ KTK+F M ++ KA ++ + N S+RNI T+K +
Sbjct: 124 IVVDAMN--FDEIKTKKFQSVMNNLKVN---KALVVLDDTCGNTVLSARNIPTVKTASVN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL T+V T + V
Sbjct: 179 TINVYDILKYNTVVATKAAV 198
>gi|307244773|ref|ZP_07526874.1| ribosomal protein L4/L1 family protein [Peptostreptococcus stomatis
DSM 17678]
gi|306491871|gb|EFM63923.1| ribosomal protein L4/L1 family protein [Peptostreptococcus stomatis
DSM 17678]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ +G+ +GE L+ + V++ A+ + NKR+GT S TR EVRGGGRK
Sbjct: 4 INVLNVSGQNVGEIELNDSIFNIEVNAHVLYEAVKCQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPRD+S + KK +RLA+ +A++S
Sbjct: 64 PWRQKGTGRARQGSIRSVQWVGGGVAFAPKPRDYSYSLPKKVRRLAMKSALSSKVQDNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ E PKTKE + + L+ +K + E N+ KS RNI +
Sbjct: 124 IVLDALS--LEAPKTKEMVNTFK--NLNAAKKVLVVTAENDANIVKSVRNIEGANVCHVS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DIL+ ++ ++T V
Sbjct: 180 TLNVYDILNCDSFIITTDAV 199
>gi|269837067|ref|YP_003319295.1| 50S ribosomal protein L4 [Sphaerobacter thermophilus DSM 20745]
gi|269786330|gb|ACZ38473.1| ribosomal protein L4/L1e [Sphaerobacter thermophilus DSM 20745]
Length = 209
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 2/204 (0%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ TG++ G+ L + V+H+A + M N R GT T TRGEVRGGGRK
Sbjct: 3 VPVYDVTGQETGQIELADSVFGIEPNVPVMHQAYVRQMANARLGTHDTKTRGEVRGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGGVVFGP PR ++ ++ +K +RLAI + +++ A+
Sbjct: 63 PWRQKGTGRARHGSIRSPLWRGGGVVFGPHPRKYTQRMPRKMRRLAIRSVLSAKMKADQV 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VVE + E P+TK I+ + R + LV E EN+ + + N+ +++L +
Sbjct: 123 VVVEGLT-ELE-PRTKAMIQTLARLPKGDARSTLILVDEPRENLRRGANNLEHVRVLPAQ 180
Query: 234 TLNLFDILDAETLVLTPSTVDFLN 257
+N+ D+L E L+LT VD ++
Sbjct: 181 YVNMRDVLKYERLLLTREAVDVIH 204
>gi|225376410|ref|ZP_03753631.1| hypothetical protein ROSEINA2194_02052 [Roseburia inulinivorans DSM
16841]
gi|225211786|gb|EEG94140.1| hypothetical protein ROSEINA2194_02052 [Roseburia inulinivorans DSM
16841]
Length = 206
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 119/210 (56%), Gaps = 5/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 ANVAVYNMEGKEVGSLELNDAIFGVEVNEHLVHMAVLQQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTHGGVVFAPVPRDYSFKLNKKEKRAALKSALTSRVNES 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+E K + KTK+F+E M + +KA ++ + NV KS+ N+ T+K
Sbjct: 122 KFVVVDEL--KLDEIKTKKFVEVMNNLKV---EKALVVLNDNDVNVIKSASNLATVKTAQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++DIL +T+V+T V + Y
Sbjct: 177 TNEINVYDILKYDTVVVTKDAVKTIEEVYA 206
>gi|357039748|ref|ZP_09101540.1| ribosomal protein L4/L1e [Desulfotomaculum gibsoniae DSM 7213]
gi|355357554|gb|EHG05327.1| ribosomal protein L4/L1e [Desulfotomaculum gibsoniae DSM 7213]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 122/202 (60%), Gaps = 8/202 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTA--RAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + G+++GE +DLK A + +H + + +R+GT T TR EV GGG
Sbjct: 4 VAMYNINGDQVGE--IDLKEDIFGIAVHQQALHDVVTMQLAGRRQGTHDTKTRAEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR GS R+P+ GGG+VFGP PR +S ++ KK +RLA+ +A++S
Sbjct: 62 RKPYRQKGTGRARHGSIRSPIWRGGGIVFGPHPRSYSYRVPKKVRRLAMKSALSSKVEGG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+V+EE K + PKTK+ ++ + +D KA + E + V KS+RNI +K L+
Sbjct: 122 TIVVLEEL--KMDVPKTKDMVKILNNLKVD--NKALVVTAERDDAVYKSARNIPGIKQLS 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++D+L +TLV+T V
Sbjct: 178 VPGLNVYDLLAHKTLVITKDAV 199
>gi|292669859|ref|ZP_06603285.1| 50S ribosomal protein L4 [Selenomonas noxia ATCC 43541]
gi|422343342|ref|ZP_16424270.1| 50S ribosomal protein L4/L1 [Selenomonas noxia F0398]
gi|292648656|gb|EFF66628.1| 50S ribosomal protein L4 [Selenomonas noxia ATCC 43541]
gi|355378649|gb|EHG25829.1| 50S ribosomal protein L4/L1 [Selenomonas noxia F0398]
Length = 207
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + ++GE L+ + + ++H+A++ + ++R GT ST TRG VRGGGRK
Sbjct: 4 VAVYDMSHNQVGEISLNDEFFNVEMNAGLLHQAVVLQLASQRLGTHSTKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ D F+ PKTK ++ + +G++ K+ F+ + + NVE+S+ NI +K +T
Sbjct: 124 IVLDQLD--FDAPKTKAAVKLLSDFGVNA--KSLFITADEAVNVERSTSNIPGVKAITAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T +
Sbjct: 180 GINVFDILHHDKLFITKDAI 199
>gi|110800870|ref|YP_697093.1| 50S ribosomal protein L4 [Clostridium perfringens ATCC 13124]
gi|168211904|ref|ZP_02637529.1| ribosomal protein L4 [Clostridium perfringens B str. ATCC 3626]
gi|168215177|ref|ZP_02640802.1| ribosomal protein L4 [Clostridium perfringens CPE str. F4969]
gi|168216632|ref|ZP_02642257.1| ribosomal protein L4 [Clostridium perfringens NCTC 8239]
gi|169347046|ref|ZP_02865988.1| ribosomal protein L4 [Clostridium perfringens C str. JGS1495]
gi|182626931|ref|ZP_02954664.1| ribosomal protein L4 [Clostridium perfringens D str. JGS1721]
gi|422347466|ref|ZP_16428378.1| 50S ribosomal protein L4 [Clostridium perfringens WAL-14572]
gi|422875350|ref|ZP_16921835.1| 50S ribosomal protein L4 [Clostridium perfringens F262]
gi|123148513|sp|Q0TMP7.1|RL4_CLOP1 RecName: Full=50S ribosomal protein L4
gi|110675517|gb|ABG84504.1| 50S ribosomal protein L4 [Clostridium perfringens ATCC 13124]
gi|169296729|gb|EDS78858.1| ribosomal protein L4 [Clostridium perfringens C str. JGS1495]
gi|170710168|gb|EDT22350.1| ribosomal protein L4 [Clostridium perfringens B str. ATCC 3626]
gi|170713383|gb|EDT25565.1| ribosomal protein L4 [Clostridium perfringens CPE str. F4969]
gi|177907721|gb|EDT70336.1| ribosomal protein L4 [Clostridium perfringens D str. JGS1721]
gi|182381262|gb|EDT78741.1| ribosomal protein L4 [Clostridium perfringens NCTC 8239]
gi|373224764|gb|EHP47101.1| 50S ribosomal protein L4 [Clostridium perfringens WAL-14572]
gi|380303880|gb|EIA16176.1| 50S ribosomal protein L4 [Clostridium perfringens F262]
Length = 204
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 125/201 (62%), Gaps = 7/201 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G+ L+ + + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ + I K +++A+++A+ S A + +V+E+
Sbjct: 71 GRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVA--DMVVLEDLT 128
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTKE ++ + + +K + EV+ENV KS+RNI + ++ +N++D+
Sbjct: 129 --FEAPKTKEAVKMLNAF---EAKKTLIITAEVNENVYKSARNIEGVTVMPVNNINVYDL 183
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L+ +TL++T V+ + Y
Sbjct: 184 LNCKTLMITKEAVNKIEEVYA 204
>gi|333373185|ref|ZP_08465101.1| 50S ribosomal protein L4 [Desmospora sp. 8437]
gi|332970764|gb|EGK09744.1| 50S ribosomal protein L4 [Desmospora sp. 8437]
Length = 208
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G ++GE L + +V+H A++ ++RRGT + R V+GGGRKP+
Sbjct: 6 VLDMNGSQVGELELSDSVFGIEPNASVLHDAVVMQQASQRRGTHAVKNRAAVQGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+P+ GGGV FGP PR +S K+ KK +RLAI +A++S A+ +V
Sbjct: 66 KQKGTGRARHGSIRSPIWVGGGVAFGPTPRSYSYKLPKKVRRLAIRSALSSKVKADELVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ E+PKTKE ++ + L +KA + ENV S+RNI +K + + L
Sbjct: 126 LDQL--TLEQPKTKEMVKVLSN--LQADRKALVVGSGYDENVALSARNIPGVKFIDAQGL 181
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D+L+ + L++T V
Sbjct: 182 NVLDVLNHDKLIITRDAV 199
>gi|325663061|ref|ZP_08151511.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086668|ref|ZP_08335745.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470515|gb|EGC73745.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409834|gb|EGG89269.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 206
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 121/207 (58%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L + ++H A+++ + NKR+GT TR EVRGGGRK
Sbjct: 4 VSVYNIEGKEVGTIDLSDAVFGVEVNEHLLHMAVVSQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A+ S +
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVEEKKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E + F KTK F + + KA ++ + ++N E S+RNI ++K
Sbjct: 124 IVLDEIN--FGEIKTKNFQNVLNNLNV---AKALVVLEDGNKNAELSARNIPSVKTARTN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N++DIL T++ T + V+ + Y
Sbjct: 179 TINVYDILKYNTVIATKAAVETIEEVY 205
>gi|414153573|ref|ZP_11409896.1| 50S ribosomal protein L4 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454971|emb|CCO07800.1| 50S ribosomal protein L4 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 206
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE++GE L + + +V+H A+ + N+R+GT T TR EV GGGRK
Sbjct: 4 VALYNVNGEQVGEVELKDEVFGIEPHESVLHDAVTMQLANQRQGTHDTKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG +FGP PRD+S + KK +RLA+ +A++S + N
Sbjct: 64 PWRQKGTGRARVGSIRSPLWRKGGTIFGPHPRDYSFSLPKKVRRLALKSALSSKVKSNNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + PKTKE + + + KA + E NVEKS+RNI +K L
Sbjct: 124 IVLDALT--IDAPKTKEMVRILNNLNAN---KALVVTAERDVNVEKSARNIAGVKPLKAE 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L LV+T V
Sbjct: 179 GVNVYDLLKYTKLVITKDAV 198
>gi|225574701|ref|ZP_03783311.1| hypothetical protein RUMHYD_02778 [Blautia hydrogenotrophica DSM
10507]
gi|225038091|gb|EEG48337.1| 50S ribosomal protein L4 [Blautia hydrogenotrophica DSM 10507]
Length = 206
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G ++G L+ + +VH A++ + NKR+GT TR EVRGGGRK
Sbjct: 4 VSVLNMEGNEVGTIELNDAVFGVEINEHLVHLAVVRQLANKRQGTQKAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+S+K+N+KE+ A+ +A+ +
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYSVKMNRKERLAALKSALTAKVQDNKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV++ KFE KTK+ + +KA + V +NV S+RNI ++ T
Sbjct: 124 IVVDDL--KFEAIKTKDMQNVLNNL---KAEKALVVTPAVDQNVVLSARNIPEVQTATVN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++D++ +TLVLT V
Sbjct: 179 TINVYDVMKHKTLVLTKDAV 198
>gi|419719246|ref|ZP_14246532.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum F0468]
gi|383304572|gb|EIC95971.1| 50S ribosomal protein L4 [Lachnoanaerobaculum saburreum F0468]
Length = 206
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 ISVFNIEGKEVGSIELNDAVFGVNVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I +NKKEKR+A+ +A+ S
Sbjct: 64 PWKQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTINLNKKEKRIALKSALTSRVLENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV++F KTK+ + + + +KA + E +N S RNI +K +P+
Sbjct: 124 IVVDDF--AMGEIKTKKMQQTLNNLNV---KKALVVCAENEKNTVLSVRNIYGVKAASPK 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N++DIL T+V + V + Y
Sbjct: 179 TINVYDILKYNTVVASKDAVKTIEEVY 205
>gi|433447313|ref|ZP_20410910.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus TNO-09.006]
gi|431999977|gb|ELK20884.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus TNO-09.006]
Length = 207
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
GE IGE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGENIGEIELNDAVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI +A++S N +V++
Sbjct: 70 TGRARQGSIRSPQWRGGGIVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENNIVVLDNL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
K E PKTKE ++ + +D +KA + + +ENV S+RNI + ++T +N+ D
Sbjct: 130 --KLEAPKTKEMVKILNNLSVD--RKALIVTADANENVILSARNIPGVTVVTASGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|452994820|emb|CCQ93484.1| ribosomal protein L4 [Clostridium ultunense Esp]
Length = 207
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE++GE L+ + + V++ + + N R+GT S TR EVRGGGRKP+
Sbjct: 6 VYNILGEQVGEIELNEDVFGIEVNQHVLYEVVKNQLANSRQGTQSVKTRAEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGGV F PKPRD+ ++ KK KRLA+ +A++S IV
Sbjct: 66 RQKGTGRARQGSIRAPHWVGGGVAFAPKPRDYGYRVPKKVKRLAMKSALSSKVLNNEIIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+EE + E PKTKE + + + +KA ++ + + NV KS+RNI ++ TL
Sbjct: 126 LEELN--LEEPKTKEMAKILE--NIKASKKALIVMDKKNINVIKSARNIPNVETTFVNTL 181
Query: 236 NLFDILDAETLVLTPSTV 253
N++DIL ++ ++T V
Sbjct: 182 NVYDILKFDSFIITKDAV 199
>gi|46396649|sp|Q8XHS4.2|RL4_CLOPE RecName: Full=50S ribosomal protein L4
Length = 204
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 125/201 (62%), Gaps = 7/201 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G+ L+ + + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ + I K +++A+++A+ S A + +V+E+
Sbjct: 71 GRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVA--DMVVLEDLT 128
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTKE ++ + + +K + EV+ENV KS+RNI + ++ +N++D+
Sbjct: 129 --FEAPKTKEAVKMLNAF---EAKKTLIITAEVNENVYKSARNIRGVTVMPVNNINVYDL 183
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L+ +TL++T V+ + Y
Sbjct: 184 LNCKTLMITKEAVNKIEEVYA 204
>gi|373859631|ref|ZP_09602357.1| ribosomal protein L4/L1e [Bacillus sp. 1NLA3E]
gi|372450626|gb|EHP24111.1| ribosomal protein L4/L1e [Bacillus sp. 1NLA3E]
Length = 207
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 60 TGEKIGETYLD--LKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+G ++GE L+ + AP+ V+ A+I + R+GT T R EV GGGRKP+ Q
Sbjct: 10 SGSQVGEIELNDSVFGIAPNNH--VLFEAVIMQRASLRQGTHKTKVRSEVAGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S EN +V+E
Sbjct: 68 KGTGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKLIEENILVLE 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
FE PKTKEF + ++ GL KA + ++ ENV S+RNI + ++T +++
Sbjct: 128 NLG--FEAPKTKEFTQVLK--GLSVASKALIVTADLDENVALSARNIPGVTVVTADGISV 183
Query: 238 FDILDAETLVLTPSTVD 254
D+L+ + L++T + V+
Sbjct: 184 LDVLNHDKLIMTKAAVE 200
>gi|304438363|ref|ZP_07398304.1| ribosomal protein L4/L1 family protein [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304368729|gb|EFM22413.1| ribosomal protein L4/L1 family protein [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 207
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + ++GE L+ + ++H+A++ + ++R GT +T TRG VRGGGRK
Sbjct: 4 VAVYDMAHNQVGEISLNDAFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ D F+ PKTK ++ + +G+D K+ F+ + + NVE+S+ NI +K +T
Sbjct: 124 IVLDHLD--FDAPKTKAAVKLLSDFGVDA--KSLFITADEAVNVERSTSNIPGVKAITAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T +
Sbjct: 180 GINVFDILHHDKLFITKDAI 199
>gi|320529797|ref|ZP_08030874.1| ribosomal protein L4/L1 family protein [Selenomonas artemidis
F0399]
gi|320137815|gb|EFW29720.1| ribosomal protein L4/L1 family protein [Selenomonas artemidis
F0399]
Length = 207
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + K+GE L+ + ++H+A++ + ++R GT +T TRG VRGGG+K
Sbjct: 4 VAVYDMSHNKVGEIDLNDDFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E D F+ PKTK+ ++ + +G+D K+ F+ + + NV +S+ NI +K +T
Sbjct: 124 IVLESLD--FDAPKTKQAVKLLNDFGVDA--KSLFITADEAVNVARSTSNIPGVKAVTAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T V
Sbjct: 180 GINVFDILHHDKLFITKDAV 199
>gi|260438215|ref|ZP_05792031.1| ribosomal protein L4/L1 family protein [Butyrivibrio crossotus DSM
2876]
gi|292809407|gb|EFF68612.1| ribosomal protein L4/L1 family protein [Butyrivibrio crossotus DSM
2876]
Length = 206
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+ +G+ L+ + +VH+A++ + NKR+GT S TR EV GGG
Sbjct: 2 AKVSVYNIEGKVVGDMELNDAVFGVEVNTHLVHQAVVLQLANKRQGTQSAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGG+VF PKPRD+S K+NKKEK LA+ + + + A
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGIVFAPKPRDYSFKMNKKEKNLALKSVLTTKVAEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+ F+ KTK + ++ + +KA + + ++NV SSRNI +K
Sbjct: 122 KFIVVDGLS--FDEIKTKNMVNVLKNLEV---KKALVVTDDDNKNVTLSSRNIPGVKTAF 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL + +V+ +
Sbjct: 177 TNTINVYDILKYDKMVVAKDVI 198
>gi|331091666|ref|ZP_08340500.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403423|gb|EGG82982.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 206
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 116/203 (57%), Gaps = 5/203 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G ++G L+ + ++H A++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGNEVGTIDLNDAVFGVEVNEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVLEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E + F KTK F + + KA ++ + + N E S+RNI +K
Sbjct: 122 KFIVLDEIN--FGEIKTKNFQNVLNNLNVS---KALVVLEDDNRNAELSARNIAAVKTAR 176
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
T+N++DIL T+V T + V+
Sbjct: 177 TNTINVYDILKYNTVVTTKAVVE 199
>gi|334338902|ref|YP_004543882.1| 50S ribosomal protein L4 [Desulfotomaculum ruminis DSM 2154]
gi|334090256|gb|AEG58596.1| ribosomal protein L4/L1e [Desulfotomaculum ruminis DSM 2154]
Length = 206
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +GE++GE L+ + V+H A++ + N+R+GT T TR EVRGGGRK
Sbjct: 4 VALYNISGEQVGEVELNDAIFGIEPNEPVLHDAVVMQLANQRQGTHDTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGVVFGP PRD+S + KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARAGSTRSPIWRSGGVVFGPHPRDYSYSLPKKVRRLALKSALSSKVLDNDI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + PKTKE + D KA + + NVEKS+RNI +K L
Sbjct: 124 IVLDGL--TMDAPKTKEMSRILGNLKAD---KALVVTADRDVNVEKSARNIEGVKPLKAE 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L LV+T V
Sbjct: 179 GVNVYDLLKYTKLVITKDAV 198
>gi|160941068|ref|ZP_02088406.1| hypothetical protein CLOBOL_05961 [Clostridium bolteae ATCC
BAA-613]
gi|158436017|gb|EDP13784.1| hypothetical protein CLOBOL_05961 [Clostridium bolteae ATCC
BAA-613]
Length = 206
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGKEVGALELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I++NKKEKR A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTIRLNKKEKRAALRSALTSRVQDNKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E KF+ KTK+F M + KA ++ + +N S+RNI +K
Sbjct: 124 IVVDEL--KFDEIKTKKFQNVMDNLKVS---KALVVLADNDQNTVLSARNIAGVKTSQVG 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
++N++DIL T+V T + V
Sbjct: 179 SINVYDILKYNTVVATKAAV 198
>gi|163815976|ref|ZP_02207346.1| hypothetical protein COPEUT_02156 [Coprococcus eutactus ATCC 27759]
gi|158448786|gb|EDP25781.1| 50S ribosomal protein L4 [Coprococcus eutactus ATCC 27759]
Length = 206
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 5/180 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+A++ + N R+GT S TR EV GGGRKP+ QK TG AR+GS R+P GGGVVF
Sbjct: 32 IMHKAVVGQLANSRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQWTGGGVVFA 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S+K+NKKEK+LA+ +A++S A +VV++ + + KT F + + +
Sbjct: 92 PKPRDYSVKMNKKEKQLAMKSALSSKVAENKLVVVDKLE--LQEAKTSVFAKILAKLSAP 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
KA + + + NV S+ NI T+K +L+++DIL E LVLT V + Y
Sbjct: 150 ---KALVVTKDKNNNVVLSANNIPTVKTTVANSLSVYDILKYEKLVLTKEAVAAIEEVYA 206
>gi|168334351|ref|ZP_02692538.1| ribosomal protein L4/L1e [Epulopiscium sp. 'N.t. morphotype B']
Length = 207
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ G+++GE LD + +VH+A+++ + N+R+GT T TR EVRGGG
Sbjct: 2 ANVSVLNMEGKQVGEVSLDDGIFGVEIKEHLVHQAVVSYLANQRQGTQCTKTRAEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK GRAR+GS R+P GGGVVF PKPRD+S K+N+KE++ A+ A+ S +
Sbjct: 62 RKPWRQKGGGRARQGSIRSPQWTGGGVVFAPKPRDYSFKVNRKERQQALKCALTSRVQEK 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+V++E K KTK ++ + L+ K+ + + NV+ ++ NI +K
Sbjct: 122 KIVVLDEL--KLTEAKTKSMVKVLD--ALNLKKALVVTEGDCAMNVKIAAGNIQGVKTSA 177
Query: 232 PRTLNLFDILDAETLVLT 249
+N++D+L +T V+T
Sbjct: 178 VNNINVYDVLKYDTFVVT 195
>gi|373106847|ref|ZP_09521147.1| 50S ribosomal protein L4 [Stomatobaculum longum]
gi|371651786|gb|EHO17212.1| 50S ribosomal protein L4 [Stomatobaculum longum]
Length = 206
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNTDGKEVGTIELNDAVFGVELNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I +NKKEKR A+ A++S +
Sbjct: 64 PWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTITLNKKEKRQALRCALSSRVQEQKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E F+ KTK+ E ++ + QKA + E + S+RNI +K +P+
Sbjct: 124 IVLESFE--LSEVKTKKMAETLKNLKV---QKALVVAPENDKTTVLSARNIAGVKTASPK 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
T+N++DIL T+V + V + Y
Sbjct: 179 TINVYDILKYNTVVTSKDVVATIEEVYA 206
>gi|402570837|ref|YP_006620180.1| 50S ribosomal protein L4 [Desulfosporosinus meridiei DSM 13257]
gi|402252034|gb|AFQ42309.1| 50S ribosomal protein L4, bacterial/organelle [Desulfosporosinus
meridiei DSM 13257]
Length = 207
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 123/202 (60%), Gaps = 8/202 (3%)
Query: 54 LPILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +++ G +GE L ++ P+ V+H A+++ + ++RRGT S L RGEVRGGG
Sbjct: 4 VQVVNMQGAAVGEIELSDNMFGITPNVH--VLHSAVVSQLASERRGTQSALLRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R+PL GGGV+F PKPR + K+ KK +RLA+ +A++S +
Sbjct: 62 RKPWRQKGTGRARSGSTRSPLWRGGGVIFAPKPRKYGFKLPKKVRRLALYSALSSKVLEQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++ KT+E ++ ++ +D +KA ++ E V +S+RNI +K +
Sbjct: 122 QLIVLDTLS--LSEVKTREIVKVLKALNVD--KKAIIVMDNADEAVLRSARNIEGVKAMD 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N+ D+L + LV+T + V
Sbjct: 178 VAGMNIVDLLHHDILVMTKAAV 199
>gi|291549415|emb|CBL25677.1| LSU ribosomal protein L4P [Ruminococcus torques L2-14]
Length = 206
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++ L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 AKVSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E + F+ KTK+F + ++ KA ++ + ++NVE S++NI +K
Sbjct: 122 KFIVVDELN--FDEIKTKKFQAVLNNLNVN---KALVVLEDGNKNVEISAKNIPDVKTAH 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 177 TNTINVYDILKYNTVIATKAVV 198
>gi|160902255|ref|YP_001567836.1| 50S ribosomal protein L4 [Petrotoga mobilis SJ95]
gi|189029512|sp|A9BHA4.1|RL4_PETMO RecName: Full=50S ribosomal protein L4
gi|160359899|gb|ABX31513.1| ribosomal protein L4/L1e [Petrotoga mobilis SJ95]
Length = 221
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 128/218 (58%), Gaps = 20/218 (9%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAA--PDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
S + I + EK+G LD+K D V++R + + NKR GTAST TR EV G
Sbjct: 2 SQIDIYNIQNEKVGT--LDIKDEIFNIDPNMDVLYRYVDMQLTNKRAGTASTKTRSEVSG 59
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP+ QK TGRAR GS R+PL GGV FGPKPR++ +NKK KRLA+ +A++
Sbjct: 60 GGRKPWPQKHTGRARAGSIRSPLFRHGGVTFGPKPREFHKDLNKKMKRLALKSALSVRYR 119
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV---MEVSENVEKSSRNIGT 226
N IV++E KFE+P+TK+ + ++G++ K FL E EN + S+RN+
Sbjct: 120 ENNLIVLDEV--KFEKPRTKDVKNILSKFGME-DTKVLFLFPYHQEQYENFKLSARNLPK 176
Query: 227 LKMLTPRT----------LNLFDILDAETLVLTPSTVD 254
+K++ LN+FD++++E +VLT V+
Sbjct: 177 VKVIIADNPGQNKKNVDGLNVFDLINSEKIVLTKEMVN 214
>gi|389843558|ref|YP_006345638.1| 50S ribosomal protein L4 [Mesotoga prima MesG1.Ag.4.2]
gi|387858304|gb|AFK06395.1| 50S ribosomal protein L4, bacterial/organelle [Mesotoga prima
MesG1.Ag.4.2]
Length = 227
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 19/215 (8%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+++ G+K+G L + ++ R + + +R G AS TR EVRGGGRKP+
Sbjct: 6 VVNIAGQKVGTVELSESVFNVEPNEDLMFRYVNMQLSGRRAGLASAKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
+QK TGRAR GS R+PL GGV+ GPKP+DWS+K+ KK K++A+ +A++ N IV
Sbjct: 66 AQKHTGRARVGSTRSPLWRHGGVIHGPKPKDWSMKLTKKMKKVALRSALSLRLKEGNLIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV---MEVSENVEKSSRNIGTLKMLTP 232
+++ KF+RPKTK+ E + GLD QK F++ + +NV S +NI +K++
Sbjct: 126 LDDL--KFDRPKTKQLREVLNNLGLDKTQKTLFVLPWQKDEYQNVRLSGKNIYGVKVIIA 183
Query: 233 RT--------------LNLFDILDAETLVLTPSTV 253
LN++DI++ E LV+T V
Sbjct: 184 DNPGNKAVNSKENIDGLNVYDIVNHEKLVITADLV 218
>gi|332655144|ref|ZP_08420885.1| ribosomal protein L4/L1 family protein [Ruminococcaceae bacterium
D16]
gi|332516004|gb|EGJ45613.1| ribosomal protein L4/L1 family protein [Ruminococcaceae bacterium
D16]
Length = 206
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 124/204 (60%), Gaps = 11/204 (5%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+++GE L + +AVVH + + N R+GT S LTR EV GGG+KP+
Sbjct: 6 VFNMAGQQVGEIELSEAVFGIEPNQAVVHEVVKNHLANCRQGTQSALTRAEVSGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TG AR+GS R P GG+VF PKPRD+S +NKK KRLA+ +A+++ AA+ + +V
Sbjct: 66 RQKGTGHARQGSTRAPQWTHGGIVFAPKPRDYSYTLNKKVKRLALKSALSAKAASGDILV 125
Query: 176 VEEFDGKFERPKTKE---FIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
V+E K + KTK+ F+ A+ K+ + EV+E V KS+RNI + T
Sbjct: 126 VDEL--KLDAIKTKDMRNFLNAVE------AGKSVVITPEVNEIVVKSARNIPGVVTTTA 177
Query: 233 RTLNLFDILDAETLVLTPSTVDFL 256
+ L+++DI++A+ LV+ + + +
Sbjct: 178 KILSVYDIVNAKRLVIDKAALAII 201
>gi|427407000|ref|ZP_18897205.1| 50S ribosomal protein L4 [Selenomonas sp. F0473]
gi|425707475|gb|EKU70519.1| 50S ribosomal protein L4 [Selenomonas sp. F0473]
Length = 207
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +++GE L+ + + ++H+A++ + ++R GT +T TRG VRGGG+K
Sbjct: 4 VAVYDMSHKQVGEINLNDEFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ + +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRSGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E D F+ PKTK ++ + +G+D K+ F+ + + NV +S+ NI +K +T
Sbjct: 124 IVLESLD--FDAPKTKAAVKLLNDFGVDA--KSLFVTADEAVNVARSTSNIPGVKAITAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T V
Sbjct: 180 GINVFDILHHDKLFITKDAV 199
>gi|291562767|emb|CBL41583.1| LSU ribosomal protein L4P [butyrate-producing bacterium SS3/4]
Length = 206
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGKEVGTIELNDAVFGVEVNEHLVHMAVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGG+VF P PRD++I +NKKEKR A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSTRSPQWTGGGMVFAPTPRDYTITLNKKEKRAALKSALTSRVNENKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+E KF+ KTK F M + KA ++ + +N S+RNI +K
Sbjct: 124 VVVDEL--KFDEVKTKNFKAVMNNLKVS---KALVVLADNDQNTVLSARNIPEVKTSLVN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N+FDIL T+V T + V
Sbjct: 179 TINVFDILKYNTVVATKAAV 198
>gi|256544507|ref|ZP_05471880.1| 50S ribosomal protein L4 [Anaerococcus vaginalis ATCC 51170]
gi|256399832|gb|EEU13436.1| 50S ribosomal protein L4 [Anaerococcus vaginalis ATCC 51170]
Length = 207
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 4/203 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ GE +GE L+ A + A V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VEVLNIKGENVGEIELNETLFAAEIAETAVYDTVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG+VF PKPRD+S KI KK +R A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGIVFAPKPRDYSYKIPKKMRRKALYSVLTSKVNDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E K + KTKE E + ++ +KA ++ E + V +S RNI +
Sbjct: 124 IVLDEL--KLDSYKTKEANEILN--NINANKKAYVVIAENDDKVYRSFRNIEGCNVEKAN 179
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
+N++D+L + LV+T ++ L
Sbjct: 180 LINVYDLLRHDKLVITKDAINKL 202
>gi|210623189|ref|ZP_03293628.1| hypothetical protein CLOHIR_01578 [Clostridium hiranonis DSM 13275]
gi|210153726|gb|EEA84732.1| hypothetical protein CLOHIR_01578 [Clostridium hiranonis DSM 13275]
Length = 207
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G+ +GE L + V++ A+ + N+R+GT S TR EVRGGGRK
Sbjct: 4 INVMNINGQNVGEIELCDSIFNVEVNEHVLYEAVKCQLANRRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPR + + KK +RLA+ A++S
Sbjct: 64 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKCALSSKVQNNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + PKTKEF+ + + +KA + E +ENV KS+RNI ++
Sbjct: 124 IVLDALT--MDAPKTKEFVAILN--NIKASRKALVVTAEKNENVIKSARNIEGVQTALVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DIL+ +T V+T V
Sbjct: 180 TLNVYDILNHDTFVITTDAV 199
>gi|28212174|ref|NP_783118.1| 50S ribosomal protein L4 [Clostridium tetani E88]
gi|46577246|sp|Q890P0.1|RL4_CLOTE RecName: Full=50S ribosomal protein L4
gi|28204618|gb|AAO37055.1| LSU ribosomal protein L1E(= L4P) [Clostridium tetani E88]
Length = 206
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L K + + V+H+ ++ + NKR+GT S+ TR EV GGGRKP+ QK T
Sbjct: 11 GQKVGDFQLSDKVFGVEVNKEVLHQVIVAQLANKRQGTQSSKTRAEVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+S+ I K KR+A+ +A++S +++E +
Sbjct: 71 GRARQGSIRAPQWIKGGVVFAPKPRDYSMAIPKSMKRVAMKSALSSKVQENEIVILESLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNIGTLKMLTPRTLNLFD 239
+ PKTKE ++ + + K T +V E S +N+ KS+RNI + +L +N++D
Sbjct: 131 A--DAPKTKEIVKMLAAFN----AKKTLIVTEESNKNIYKSARNIEGVTVLPVNNINVYD 184
Query: 240 ILDAETLVLTPSTVDFLNGRYG 261
IL + ++T V + Y
Sbjct: 185 ILRYDKFIITKDAVSKIEEVYA 206
>gi|167759861|ref|ZP_02431988.1| hypothetical protein CLOSCI_02224 [Clostridium scindens ATCC 35704]
gi|336421094|ref|ZP_08601254.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 5_1_57FAA]
gi|167662480|gb|EDS06610.1| 50S ribosomal protein L4 [Clostridium scindens ATCC 35704]
gi|336002453|gb|EGN32562.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 206
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 9/204 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAA--PDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+ + + + G+++G +DL A + ++H A++ + NKR+GT TR EV G
Sbjct: 2 ANVSVYNIEGKEVGT--MDLSDAVFGVEINEHLLHMAVVNQLANKRQGTQKAKTRSEVSG 59
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A+ +
Sbjct: 60 GGRKPWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTAKVE 119
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
+ IVV+E K + KTK F ++ LD KA ++ + + N E S+RNI +K
Sbjct: 120 EKKFIVVDEI--KLDEIKTKNFANILK--NLDV-SKALVVLEDGNTNAEVSARNIADIKT 174
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 175 ARSNTINVYDILKYNTVIATKAAV 198
>gi|363898729|ref|ZP_09325251.1| 50S ribosomal protein L4 [Oribacterium sp. ACB1]
gi|395209095|ref|ZP_10398260.1| 50S ribosomal protein L4 [Oribacterium sp. ACB8]
gi|361960634|gb|EHL13870.1| 50S ribosomal protein L4 [Oribacterium sp. ACB1]
gi|394705696|gb|EJF13222.1| 50S ribosomal protein L4 [Oribacterium sp. ACB8]
Length = 206
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G+ L+ A ++H A++ + NKR+GT LTR EV GGG
Sbjct: 2 ANVSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD++ +NKKEKR A+ +A+++A A
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTTMNKKEKRAALKSALSNAVAEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E F+ KTK F + + QKA L+ E +N S+RNI +K
Sbjct: 122 KLIVVDEI--HFDEIKTKNFQNMLNALNV---QKAFVLLDENDKNTVLSARNIQDVKTAQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++D+L T++ T + +
Sbjct: 177 VNELNVYDVLRYGTVLATKAAL 198
>gi|319789239|ref|YP_004150872.1| ribosomal protein L4/L1e [Thermovibrio ammonificans HB-1]
gi|317113741|gb|ADU96231.1| ribosomal protein L4/L1e [Thermovibrio ammonificans HB-1]
Length = 208
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 2/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ ++ G + + A + V + + +RRGT ST TRGEVRGGGRK
Sbjct: 3 IKVVDLNNKETGTVQIKDEIANAPIKQHAVWETVKWQLAKRRRGTHSTKTRGEVRGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GPKPRD+S + KK +++A+ + +A N
Sbjct: 63 PWPQKHTGRARQGSIRAPQWVGGGVVHGPKPRDYSYNLPKKVRKVALKSVVAGRIQEGNF 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVVE+F FE+PKTK+ +E ++ GL+ + + E+ EN S RN+ +K+L
Sbjct: 123 IVVEDFS--FEKPKTKQAVEFLKNLGLENSKVLLVVPAELDENTYLSFRNLPNVKVLPVE 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++DIL + V+ S +
Sbjct: 181 GLNVYDILCYDKCVVFKSIL 200
>gi|268609592|ref|ZP_06143319.1| 50S ribosomal protein L4 [Ruminococcus flavefaciens FD-1]
Length = 207
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + + TG+++ ET L+ + V+H A++ + N+R+GT STLTR EV GGG
Sbjct: 2 STISVFDMTGKQVSETELNDEVFGITPNEGVMHAAVVNYLANQRQGTQSTLTRTEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GG+ GPKPRD+ +NKK KRLA+ +A+++
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWVHGGIALGPKPRDYRYALNKKVKRLAMKSALSTKVIDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ E KTK +E ++ G++ KA + E V KS+ NI +K
Sbjct: 122 NMIVLDALT--LESYKTKPVVEMLKALGVEG--KALIVTAEADAKVIKSAANIPGVKTAA 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
TLN++DIL+ + ++ + V
Sbjct: 178 VNTLNVYDILNYDKFIVVKNAV 199
>gi|415886278|ref|ZP_11548101.1| 50S ribosomal protein L4 [Bacillus methanolicus MGA3]
gi|387588931|gb|EIJ81252.1| 50S ribosomal protein L4 [Bacillus methanolicus MGA3]
Length = 207
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++GE L+ + + V+ A++ + R+GT T R EV GGGRK
Sbjct: 4 VALFNQNGSQVGEIELNDAVFGIEPNKHVLFEAVVMQRASLRQGTHKTKIRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E FE PKTK+F+ ++ +D KA + ++ ENV S+RNI + ++
Sbjct: 124 LVLENL--VFETPKTKDFVGVLKNLSVD--SKALVVTADLDENVALSARNIPGVTVVAAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L+ + L++T + V+
Sbjct: 180 GINVLDVLNHDKLIMTKAAVE 200
>gi|313895056|ref|ZP_07828613.1| 50S ribosomal protein L4 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975951|gb|EFR41409.1| 50S ribosomal protein L4 [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 207
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +++GE L + ++H+A++ + ++R GT +T TRG VRGGG+K
Sbjct: 4 VAVYDMSHKQVGEIDLSDDFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E D F+ PKTK+ ++ + +G+D K+ F+ + + NV +S+ NI +K +T
Sbjct: 124 IVLESLD--FDAPKTKQAVKLLNDFGVDA--KSLFITADEAVNVARSTSNIPGVKAITAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T V
Sbjct: 180 GINVFDILHHDKLFITKDAV 199
>gi|78043328|ref|YP_361117.1| 50S ribosomal protein L4 [Carboxydothermus hydrogenoformans Z-2901]
gi|109893583|sp|Q3A9R7.1|RL4_CARHZ RecName: Full=50S ribosomal protein L4
gi|77995443|gb|ABB14342.1| ribosomal protein L4 [Carboxydothermus hydrogenoformans Z-2901]
Length = 206
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + G ++GE L + +AV++ + + N+RRGT T TRGEV GGGRK
Sbjct: 4 VPVYNMEGAQVGEIELKDEIFGAPVNKAVLYEVSLMYLANQRRGTHDTKTRGEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG+VFGP PRD+S + KK +R A+ +A++ N
Sbjct: 64 PWRQKGTGRARHGSIRSPLWRKGGIVFGPHPRDYSYSVPKKVRRAALKSALSDKVNENNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ F PKTKE I + L K + E VEKS+RNI + ++T
Sbjct: 124 IVVDSLT--FAAPKTKEMIRVLN--NLKVNGKTLIVTAGYDEIVEKSARNIPGVSVMTAP 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+LN +L+ + L++T V
Sbjct: 180 SLNALSLLNHDKLIMTRDAV 199
>gi|374308550|ref|YP_005054981.1| 50S ribosomal protein L4/L1 [Filifactor alocis ATCC 35896]
gi|291166878|gb|EFE28924.1| 50S ribosomal protein L4/L1 [Filifactor alocis ATCC 35896]
Length = 207
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ GEK+ E L + VV++ + + NKR GT S TR EVRGGG K
Sbjct: 4 VDVLNINGEKVSEMELSENLFGAEINEHVVYQVVKNHLANKRVGTQSAKTRAEVRGGGAK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S + KK +RLA+ + + N
Sbjct: 64 PWRQKGTGRARQGSIRSPQWKGGGVVFAPKPRDYSYTVPKKIRRLALKSVLTDKVNEGNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV++ + KT+EF + + L +KA + + S V +S RNI +K+
Sbjct: 124 VVVDDIN--LTEWKTREFAKMLS--ALKVGKKALVVTKDNSPEVVRSGRNIKNVKIAFVG 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL+A TLVLT V
Sbjct: 180 TMNVYDILNANTLVLTKDAV 199
>gi|355681921|ref|ZP_09062209.1| 50S ribosomal protein L4 [Clostridium citroniae WAL-17108]
gi|354811332|gb|EHE95965.1| 50S ribosomal protein L4 [Clostridium citroniae WAL-17108]
Length = 206
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD++I++NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWKGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVQDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E K + KTK+F M + KA ++ + +N S+RNI +K
Sbjct: 122 KFIVLDEL--KLDEIKTKKFQNVMDNLKVS---KALVVLADNDQNAVLSARNIADVKTAQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
++N++DIL T+V T + V
Sbjct: 177 VNSINVYDILKYNTVVATKAAV 198
>gi|357054995|ref|ZP_09116073.1| 50S ribosomal protein L4 [Clostridium clostridioforme 2_1_49FAA]
gi|355383695|gb|EHG30772.1| 50S ribosomal protein L4 [Clostridium clostridioforme 2_1_49FAA]
Length = 206
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + +VH A++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNMEGKEVGTLELNDAVFGVEVNEHLVHLAVVAQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGG+VF P PRD++I++NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWKGGGIVFAPTPRDYTIRLNKKEKRAALRSALTSRVQDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E KF+ KT++F M + KA ++ + +N S+RNI +K
Sbjct: 122 KFIVVDEL--KFDEIKTRKFQNVMDNLKVS---KALVVLADNDQNTVLSARNIADVKTSQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
++N++DIL T+V T + V
Sbjct: 177 VGSINVYDILKYNTVVATKAAV 198
>gi|239825694|ref|YP_002948318.1| 50S ribosomal protein L4 [Geobacillus sp. WCH70]
gi|259491561|sp|C5D3R8.1|RL4_GEOSW RecName: Full=50S ribosomal protein L4
gi|239805987|gb|ACS23052.1| ribosomal protein L4/L1e [Geobacillus sp. WCH70]
Length = 207
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
+GE IGE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 SGETIGEIELNDSVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S N +V++
Sbjct: 70 TGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENNIVVLDNL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTKE ++ + +D +KA + +V+ENV S+RNI + ++T +N+ D
Sbjct: 130 T--LEAPKTKEMVKILNNLSVD--RKALIVTDDVNENVTLSARNIPGVTVVTANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|335046489|ref|ZP_08539512.1| 50S ribosomal protein L4 [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333760275|gb|EGL37832.1| 50S ribosomal protein L4 [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 206
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G+ L+ A ++H A++ + NKR+GT LTR EV GGG
Sbjct: 2 ANVSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD++ +NKKEKR A+ A+++A A
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTTMNKKEKRAALKAALSNAVAEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E +F+ KTK F + + QKA L+ E +N S+RNI +K
Sbjct: 122 KLIVVDEI--RFDEIKTKNFQNMLNALHV---QKAFVLLDENDKNTVLSARNIQDVKTAQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++D+L T++ T + +
Sbjct: 177 VNELNVYDVLRYGTVLATKAAL 198
>gi|289423702|ref|ZP_06425501.1| ribosomal protein, L4/L1 family [Peptostreptococcus anaerobius
653-L]
gi|429727971|ref|ZP_19262717.1| 50S ribosomal protein L4 [Peptostreptococcus anaerobius VPI 4330]
gi|289155952|gb|EFD04618.1| ribosomal protein, L4/L1 family [Peptostreptococcus anaerobius
653-L]
gi|429150828|gb|EKX93722.1| 50S ribosomal protein L4 [Peptostreptococcus anaerobius VPI 4330]
Length = 207
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ +G+ +GE L+ + V++ A+ + NKR+GT S TR EVRGGGRK
Sbjct: 4 INVLNVSGQNVGEIELNDSIFDIEVNEHVLYEAVKCQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPRD+S + KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARQGSIRSVQWVGGGVAFAPKPRDYSYSLPKKVRRLAMKSALSSKVQDKEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ E PKTKE + + ++ +K + E NV KS RNI +
Sbjct: 124 IVLDALS--LEAPKTKEIVNLFK--NVNAAKKTLVVTAENDVNVVKSVRNIEGANVAHVS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DIL+ ++ ++T V
Sbjct: 180 TLNVYDILNCDSFIITTDAV 199
>gi|399889063|ref|ZP_10774940.1| 50S ribosomal protein L4 [Clostridium arbusti SL206]
Length = 206
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 5/200 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L + +H+ ++ + NKR+G S TR EV GGG KP+ QK T
Sbjct: 11 GKKVGDIELSTNIFGAEVNTDALHQVVVAQLANKRQGNQSAKTRSEVSGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GG+VF PKPRD+ I + K +R+A+ +A++S A IV+E +
Sbjct: 71 GRARQGSIRSPQWIHGGIVFAPKPRDYRISVPKSMRRVAMKSALSSKVAENEIIVLEGLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE I+ + D K KA +V E +ENV KS RNI + ++ LN++DI
Sbjct: 131 --LEVPKTKEMIKMLN--AFDSK-KALIVVAESNENVYKSVRNIEGISVIPANNLNVYDI 185
Query: 241 LDAETLVLTPSTVDFLNGRY 260
L + ++T V + Y
Sbjct: 186 LKYDNFIITKDAVSKIEEVY 205
>gi|197303813|ref|ZP_03168849.1| hypothetical protein RUMLAC_02552 [Ruminococcus lactaris ATCC
29176]
gi|197297106|gb|EDY31670.1| 50S ribosomal protein L4 [Ruminococcus lactaris ATCC 29176]
Length = 206
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++ L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 AKVSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALTSRVEEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E KF+ KTK+F + ++ KA ++ E +N E S++NI +K
Sbjct: 122 KFIVVDEM--KFDEIKTKKFQTVLNNLNVN---KALVVLEEGDKNAEISAKNIPDVKTAR 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 177 VNTINVYDILKYNTVIATKAVV 198
>gi|383761364|ref|YP_005440346.1| 50S ribosomal protein L4 [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381632|dbj|BAL98448.1| 50S ribosomal protein L4 [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 211
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 5/206 (2%)
Query: 59 FTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
G+++GE L D AAP AV+H+AL+ + N R GT T TR EV GGGRKP+ Q
Sbjct: 1 MNGQQVGEVELSDAVFAAP-IHTAVMHQALMRQLANARLGTHDTKTRSEVSGGGRKPWRQ 59
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR+GS R P GGG+VFGP PR ++ + KK +R+A+ +A++ AA +V++
Sbjct: 60 KGTGRARQGSIRAPQWVGGGIVFGPTPRKYTKALPKKMQRMALRSALSVKAAEGQIVVID 119
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
+ PKTK + + G+ QK ++ E S V KS RN+ +K L LN+
Sbjct: 120 RV--AIDEPKTKIAAQMLSALGI-ADQKVLLVMNEKSVPVWKSVRNLPQVKSLLTGYLNI 176
Query: 238 FDILDAETLVLTPSTVDFLNGRYGVE 263
D+L + L+LT VDF+ GVE
Sbjct: 177 RDLLGYDVLLLTRDAVDFIEAWLGVE 202
>gi|225016284|ref|ZP_03705476.1| hypothetical protein CLOSTMETH_00187 [Clostridium methylpentosum
DSM 5476]
gi|224950959|gb|EEG32168.1| hypothetical protein CLOSTMETH_00187 [Clostridium methylpentosum
DSM 5476]
Length = 207
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 8/198 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSA--APDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +++ G+++ + +DL A + +AV+H A++ + N+R+GT STLTR EVRGGG
Sbjct: 4 VAVMNMAGKEVSK--IDLSDAIFGIEPNKAVLHMAVVNYLANQRQGTQSTLTRTEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TG AR+GS R+P GGV GPKPRD+S +NKK KRLA+ +A+++ A
Sbjct: 62 KKPWRQKGTGHARQGSTRSPQWTHGGVALGPKPRDYSYSLNKKVKRLAMKSALSAKAVDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ IVV+ KTKE I+ + G D +KA ++ E+ V KS+ NI ++
Sbjct: 122 DLIVVDSI--ALAEYKTKEVIKMLGALGAD--KKALIVLPEMDAKVIKSAANIPGVRTTQ 177
Query: 232 PRTLNLFDILDAETLVLT 249
LN++DIL+ + L++
Sbjct: 178 VNELNVYDILNHDKLIVV 195
>gi|222099968|ref|YP_002534536.1| 50S ribosomal protein L4 [Thermotoga neapolitana DSM 4359]
gi|254803761|sp|B9K887.1|RL4_THENN RecName: Full=50S ribosomal protein L4
gi|221572358|gb|ACM23170.1| 50S ribosomal protein L4 [Thermotoga neapolitana DSM 4359]
Length = 235
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 23/217 (10%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L+ GEK+G + D V+ R + + N+R GTAST TRGEV GGGRKP+
Sbjct: 6 LLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+P+ GGV GPKPRDWS K+NKK KRLA+ +A+ S EN ++
Sbjct: 66 PQKHTGRARHGSIRSPIWRHGGVAHGPKPRDWSKKLNKKMKRLALRSAL-SVKYRENKLL 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKMLT 231
V E D K ERPKTK E ++ LD K +V+ E NV+ S +N+ +K++
Sbjct: 125 VLE-DLKLERPKTKSLKEILQ--NLDLADKKALIVLPWKEEGYVNVKLSGKNLPNVKVII 181
Query: 232 PRT---------------LNLFDILDAETLVLTPSTV 253
LN+FD+L + L+LT V
Sbjct: 182 ADNPNNSKNGEKAVRIDGLNVFDMLKYDYLILTRDMV 218
>gi|212697254|ref|ZP_03305382.1| hypothetical protein ANHYDRO_01822 [Anaerococcus hydrogenalis DSM
7454]
gi|212675703|gb|EEB35310.1| hypothetical protein ANHYDRO_01822 [Anaerococcus hydrogenalis DSM
7454]
Length = 207
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ GE +GE L+ A D A V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VEVLNIKGENVGEIELNETLFAADIAETAVYDTVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG+VF PKPRD+S KI KK KR A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGIVFAPKPRDYSYKIPKKMKRKALYSVLTSKVNDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++E K + KTKE E + D +KA ++ E + V +S RNI +
Sbjct: 124 VVLDEL--KLDSYKTKEANEILTNIKAD--KKAYVVIAENDDKVYRSFRNIEGCDVEKAN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L LV+T +
Sbjct: 180 LINVYDLLRHNKLVITKEAI 199
>gi|386812699|ref|ZP_10099924.1| 50S ribosomal protein L4 [planctomycete KSU-1]
gi|386404969|dbj|GAB62805.1| 50S ribosomal protein L4 [planctomycete KSU-1]
Length = 203
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 127/207 (61%), Gaps = 7/207 (3%)
Query: 54 LPILSFT--GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ IL + GEK+ L+ K ++ A+I NKR+GTA T TRGEV GGG
Sbjct: 1 MEILVYNKLGEKVNNIQLNEKKYGGPVRTKLLRDAVIMYEANKRQGTACTKTRGEVAGGG 60
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR GS R+P+ GGGV FGP+PRD+S I KK ++LA+ +A+ +
Sbjct: 61 KKPWVQKHTGRARAGSIRSPIWKGGGVSFGPRPRDYSYSIPKKARKLALYSALTAKIRDN 120
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKML 230
+V+E + F+ PKTK+ + ++ G++ + +V+ E +E V KS+RNI ++K++
Sbjct: 121 ELLVLESLE--FDTPKTKQMVGILKALGIN--GGSCLIVLPEANEIVWKSARNIPSVKVM 176
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLN 257
T LN +D+L + +++T ++ +N
Sbjct: 177 TSAELNAYDVLKPKKILITREALNSIN 203
>gi|196251023|ref|ZP_03149705.1| ribosomal protein L4/L1e [Geobacillus sp. G11MC16]
gi|196209495|gb|EDY04272.1| ribosomal protein L4/L1e [Geobacillus sp. G11MC16]
Length = 207
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 119/195 (61%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G+ IGE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGQTIGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S + +V+++
Sbjct: 70 TGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENDIVVLDQL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTKE ++ + +D +KA + E++ENV S+RNI +K++ +N+ D
Sbjct: 130 S--LEAPKTKEMVKILNNLAVD--RKALIVTDELNENVYLSARNIPGVKVVAANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|260681847|ref|YP_003213132.1| 50S ribosomal protein L4 [Clostridium difficile CD196]
gi|260685445|ref|YP_003216578.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
gi|423081657|ref|ZP_17070259.1| 50S ribosomal protein L4 [Clostridium difficile 002-P50-2011]
gi|423085189|ref|ZP_17073644.1| 50S ribosomal protein L4 [Clostridium difficile 050-P50-2011]
gi|423089504|ref|ZP_17077862.1| 50S ribosomal protein L4 [Clostridium difficile 70-100-2010]
gi|260208010|emb|CBA60188.1| 50S ribosomal protein L4 [Clostridium difficile CD196]
gi|260211461|emb|CBE01581.1| 50S ribosomal protein L4 [Clostridium difficile R20291]
gi|357550235|gb|EHJ32060.1| 50S ribosomal protein L4 [Clostridium difficile 002-P50-2011]
gi|357550521|gb|EHJ32335.1| 50S ribosomal protein L4 [Clostridium difficile 050-P50-2011]
gi|357558114|gb|EHJ39621.1| 50S ribosomal protein L4 [Clostridium difficile 70-100-2010]
Length = 217
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 119/200 (59%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L+ +G+ +GE L + V++ + + NKR+GT S TR EVRGGGRK
Sbjct: 14 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 73
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPR + + KK +RLA+ +A++S
Sbjct: 74 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEV 133
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + + PKTKEF + + ++ +KA ++ + ++NV KS+RNI ++
Sbjct: 134 IVLDALN--MDAPKTKEFAQILNN--INAAKKALVVIADKNDNVIKSARNIEGVQTALVN 189
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL ++ ++T V
Sbjct: 190 TMNVYDILKYDSFIITTDAV 209
>gi|383753516|ref|YP_005432419.1| putative 50S ribosomal protein L4 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365568|dbj|BAL82396.1| putative 50S ribosomal protein L4 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 207
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + T +++G+ L+ + ++H+A++ + +R GT +T TR VRGGG
Sbjct: 2 ATVAVYDITNKQVGDIELNDNIFGVEMNAGLLHQAVVMQLAAQRLGTHATKTRSFVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R+PL GGG VFGP PR ++ + +K++RLAI A++
Sbjct: 62 RKPWKQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYAFSMPRKQRRLAIKCALSDKVKNG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+V++ + FE KTK+ ++ M + ++ +KA + + +ENVEKS+RNI +K ++
Sbjct: 122 ELVVLDSLE--FEAAKTKQVVKMMSDFSVE--KKALLITADEAENVEKSARNIPGVKAIS 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+ DIL+ + L +T V
Sbjct: 178 MMGLNVHDILNHDKLFITKDAV 199
>gi|390556575|ref|ZP_10243000.1| ribosomal protein L4 [Nitrolancetus hollandicus Lb]
gi|390174867|emb|CCF82283.1| ribosomal protein L4 [Nitrolancetus hollandicus Lb]
Length = 212
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 6/209 (2%)
Query: 54 LPILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+P+ +G +I + L D+ P+ V+H+AL+ N R GT TLTRGEVRGGG
Sbjct: 3 VPVFDLSGHEIDQVELANDVFGIEPNIP--VMHQALVRQQANARLGTHDTLTRGEVRGGG 60
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGGVV+GP PR ++ ++ KK ++LAI + +++ + AE
Sbjct: 61 RKPWRQKGTGRARQGSIRSPQWRGGGVVWGPHPRRYTQRMPKKMRQLAIRSVLSAKSQAE 120
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV G P+TK EA+ + + L E EN+ + + N+ +K+L
Sbjct: 121 QLVVVAGMAGI--EPRTKAMREALAKLPHGNARSTLILAGESRENIYRGAGNLENVKVLP 178
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+ +N+ D+L E L++T VD ++ +
Sbjct: 179 AQYVNMHDVLKHERLLVTREAVDIIHNLW 207
>gi|339442853|ref|YP_004708858.1| 50S ribosomal protein L4 [Clostridium sp. SY8519]
gi|338902254|dbj|BAK47756.1| ribosomal protein L4 [Clostridium sp. SY8519]
Length = 206
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAA--PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + GE++G LDL A + +VH A+ + NKR+GT TR EVRGGG
Sbjct: 4 VSVYNMAGEEVGT--LDLNDAVFGVEPNEHLVHAAVTAQLANKRQGTQKAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PR + +K+NKKEKR A+ + ++S A
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPVPRSYDLKVNKKEKRAALKSVLSSKVADS 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV+++ K + KTK+F+ + + A ++ + ENV +S+ N+ ++
Sbjct: 122 KFIVLDDL--KLDAIKTKDFVNVLNNLKV---SDALVILNGMDENVIRSAANVADVQTTQ 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N+FD+L +T+V T + V
Sbjct: 177 INNMNVFDVLKHDTVVTTKAAV 198
>gi|389577501|ref|ZP_10167529.1| 50S ribosomal protein L4, bacterial/organelle [Eubacterium
cellulosolvens 6]
gi|389312986|gb|EIM57919.1| 50S ribosomal protein L4, bacterial/organelle [Eubacterium
cellulosolvens 6]
Length = 206
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G+ L + +VH+A++ + N R+GT TR EVRGGGRK
Sbjct: 4 VSVYNMEGAEVGKMELSDAVFGVEIKENLVHQAVVLQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+S K+N+KEK+ A+ + + S
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNRKEKQAALKSVLTSKVQENKF 123
Query: 174 IVVEEFDGKFERPKTKEF---IEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
+V++E KF+ PKTKE I+A++ +KA +V + S+N S+RN+ +
Sbjct: 124 LVLDEL--KFDAPKTKEMKKVIDALKV------EKALVIVGKDSDNAVLSARNLEGVATA 175
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+ T+N++D+L T++ T S+V + Y
Sbjct: 176 SAETINVYDLLKYNTVIATKSSVAAIEEVY 205
>gi|254973732|ref|ZP_05270204.1| 50S ribosomal protein L4 [Clostridium difficile QCD-66c26]
gi|255091121|ref|ZP_05320599.1| 50S ribosomal protein L4 [Clostridium difficile CIP 107932]
gi|255099233|ref|ZP_05328210.1| 50S ribosomal protein L4 [Clostridium difficile QCD-63q42]
gi|255305016|ref|ZP_05349188.1| 50S ribosomal protein L4 [Clostridium difficile ATCC 43255]
gi|255312776|ref|ZP_05354359.1| 50S ribosomal protein L4 [Clostridium difficile QCD-76w55]
gi|255515535|ref|ZP_05383211.1| 50S ribosomal protein L4 [Clostridium difficile QCD-97b34]
gi|255648630|ref|ZP_05395532.1| 50S ribosomal protein L4 [Clostridium difficile QCD-37x79]
gi|306518753|ref|ZP_07405100.1| 50S ribosomal protein L4 [Clostridium difficile QCD-32g58]
gi|384359400|ref|YP_006197252.1| 50S ribosomal protein L4 [Clostridium difficile BI1]
gi|400927241|ref|YP_001086538.2| 50S ribosomal protein L4 [Clostridium difficile 630]
gi|328887509|emb|CAJ66889.2| 50S ribosomal protein L4 [Clostridium difficile 630]
Length = 207
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 119/200 (59%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L+ +G+ +GE L + V++ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPR + + KK +RLA+ +A++S
Sbjct: 64 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + + PKTKEF + + ++ +KA ++ + ++NV KS+RNI ++
Sbjct: 124 IVLDALN--MDAPKTKEFAQILN--NINAAKKALVVIADKNDNVIKSARNIEGVQTALVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL ++ ++T V
Sbjct: 180 TMNVYDILKYDSFIITTDAV 199
>gi|238928154|ref|ZP_04659914.1| ribosomal protein L4 [Selenomonas flueggei ATCC 43531]
gi|238884114|gb|EEQ47752.1| ribosomal protein L4 [Selenomonas flueggei ATCC 43531]
Length = 207
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + ++GE L + + ++H+A++ + ++R GT +T TRG VRGGGRK
Sbjct: 4 VAVYDMSHNQVGEISLSDEFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ D F PKTK ++ + +G++ K+ F+ + + NVE+S+ NI +K +T
Sbjct: 124 IVLDQLD--FGAPKTKAAVKLLSDFGVNA--KSLFITADEAVNVERSTSNIPGVKAITAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T +
Sbjct: 180 GINVFDILHHDKLFITKDAI 199
>gi|212637955|ref|YP_002314475.1| 50S ribosomal protein L4 [Anoxybacillus flavithermus WK1]
gi|226730612|sp|B7GJ68.1|RL4_ANOFW RecName: Full=50S ribosomal protein L4
gi|212559435|gb|ACJ32490.1| Ribosomal protein L4 [Anoxybacillus flavithermus WK1]
Length = 207
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 121/195 (62%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
GE IGE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGENIGEIELNDAVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A+ S+ EN+IVV +
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPVPRSYSYKLPKKVRRLAIKSAL-SSKVLENSIVVLD- 127
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ E PKTKE ++ + +D +KA + + +ENV S+RNI + ++T +N+ D
Sbjct: 128 NLTLEAPKTKEMVKILNNLSVD--RKALIVTADANENVILSARNIPGVTVVTASGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|89100348|ref|ZP_01173213.1| 50S ribosomal protein L4 [Bacillus sp. NRRL B-14911]
gi|89084969|gb|EAR64105.1| 50S ribosomal protein L4 [Bacillus sp. NRRL B-14911]
Length = 207
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G ++GE L+ + V+ A++ + R+GT T R EV GGGRK
Sbjct: 4 VALLNQAGSQVGEIELNETIFGIEPNNHVLFEAVVMQRASLRQGTHKTKIRSEVAGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S A EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVAEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E E PKTK+F + GL +KA + ++ ENV S+RNI + ++T
Sbjct: 124 LVLENL--ALETPKTKDFKGVLT--GLSVDKKALIVTADLDENVALSARNIPGVTVVTAT 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + L++T + V+
Sbjct: 180 GVNVLDVLSHDKLIMTKAAVE 200
>gi|402302062|ref|ZP_10821182.1| 50S ribosomal protein L4 [Selenomonas sp. FOBRC9]
gi|400381049|gb|EJP33853.1| 50S ribosomal protein L4 [Selenomonas sp. FOBRC9]
Length = 207
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +++GE L + ++H+A++ + ++R GT +T TRG VRGGG+K
Sbjct: 4 VAVYDMSHKQVGEIDLSDDFFNVEMNAGLLHQAVVLQLASQRLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K++RLA+ A++ +
Sbjct: 64 PWRQKGTGRARAGSTRSPLWVGGGTVFGPHPRKYGFTMPRKQRRLALKCALSDKVRTGDF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ D F+ PKTK+ ++ + +G+D K+ F+ + + NV +S+ NI +K +T
Sbjct: 124 IVLDSLD--FDAPKTKQAVKLLNDFGVDA--KSLFITADEAVNVARSTSNIPGVKAVTAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+FDIL + L +T V
Sbjct: 180 GINVFDILHHDKLFITKDAV 199
>gi|312880371|ref|ZP_07740171.1| LSU ribosomal protein L4P [Aminomonas paucivorans DSM 12260]
gi|310783662|gb|EFQ24060.1| LSU ribosomal protein L4P [Aminomonas paucivorans DSM 12260]
Length = 208
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 6/194 (3%)
Query: 57 LSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++F G+ IGE L D +AP A A+ H+ ++ + N R GT T RGEVRGGGRKP+
Sbjct: 7 VNFQGDVIGEFELSDAVFSAPVHAPAM-HQVVVAHLANCRLGTHDTKDRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P+ GGGV GP PRD+ K+NKK +RLA+ +A+ A E +V
Sbjct: 66 RQKHTGRARQGSTRSPIWVGGGVAHGPHPRDYHQKVNKKVRRLALRSALTLKAQEEVLLV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ FD + PKTK + + + + +K + E V KS+ NI +L +L
Sbjct: 126 LDRFD--LDAPKTKAMLAFLGK--VQSGKKPLLVTHESDPRVHKSAANIPGAAVLHVDSL 181
Query: 236 NLFDILDAETLVLT 249
N++D+L + L++T
Sbjct: 182 NVYDLLHHDQLIVT 195
>gi|325848833|ref|ZP_08170343.1| 50S ribosomal protein L4 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480477|gb|EGC83539.1| 50S ribosomal protein L4 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ GE +GE L+ A D A V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VEVLNIKGENVGEIELNETLFAADIAETAVYDTVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG+VF PKPRD+S KI +K KR A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGIVFAPKPRDYSYKIPRKMKRKALYSVLTSKVNDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++E K + KTKE E + D +KA ++ E + V +S RNI +
Sbjct: 124 VVLDEL--KLDSYKTKEANEILTNIKAD--KKAYVVIAENDDKVYRSFRNIEGCNVEKAN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D+L LV+T +
Sbjct: 180 LINVYDLLRHNKLVITKEAI 199
>gi|330850883|ref|YP_004376633.1| 50S ribosomal protein L4 [Fistulifera sp. JPCC DA0580]
gi|328835703|dbj|BAK18999.1| 50S ribosomal protein L4 [Fistulifera sp. JPCC DA0580]
Length = 215
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ L+ + ++R+GT ST TR EVRGGGRKP+ QK TGRAR GSNR+PL GGGV FG
Sbjct: 37 LLHKDLLRHLNSQRQGTVSTKTRSEVRGGGRKPWRQKGTGRARAGSNRSPLWKGGGVTFG 96
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPR + +K+NKKE+RLA+ T I + +++ + PKTK F++ + +
Sbjct: 97 PKPRQFELKVNKKERRLALQTLIYN--KRNKLVIINNLESDLTEPKTKAFLKICKDCEIS 154
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
QK + + + ++ +++N+ +++++ LN +L A+ ++LTP ++
Sbjct: 155 MDQKILVVTSKKTPTLKLATQNLKNVELISAGHLNTLSLLRAQQIILTPLAIN 207
>gi|373494193|ref|ZP_09584798.1| 50S ribosomal protein L4/L1 [Eubacterium infirmum F0142]
gi|371968690|gb|EHO86144.1| 50S ribosomal protein L4/L1 [Eubacterium infirmum F0142]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 122/202 (60%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ G++ G L + A + + VH ++ + N+R+GT S TR EVRGGG
Sbjct: 2 AKVKMLNMEGKEAGTLDLIDEIFAIEPNESAVHAVVVNYLANQRQGTQSAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGR R+GS+ P + GGG+VF PKPRD+ + KK KRLA+ + +++ A +
Sbjct: 62 RKPFRQKGTGRHRQGSSTDPSQIGGGIVFAPKPRDYRYAVPKKLKRLALKSVLSAKLADK 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E K PKTKE ++ + D +KA + E ENV KS+ NI ++ +
Sbjct: 122 ELIVIDEL--KMNEPKTKEMVKVLSNVKAD--KKALIVTAEKDENVVKSAANIPGVRTVL 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N+++I++ +L+LT V
Sbjct: 178 ANTMNVYEIVNHGSLILTKDAV 199
>gi|255654163|ref|ZP_05399572.1| 50S ribosomal protein L4 [Clostridium difficile QCD-23m63]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L+ +G+ +GE L + V++ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPR + + KK +RLA+ +A++S
Sbjct: 64 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + + PKTKEF + + ++ +KA ++ + ++N+ KS+RNI ++
Sbjct: 124 IVLDALN--MDAPKTKEFAQILN--NINAAKKALVVIADKNDNIIKSARNIEGVQTALVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL ++ ++T V
Sbjct: 180 TMNVYDILKYDSFIITTDAV 199
>gi|138893786|ref|YP_001124239.1| 50S ribosomal protein L4 [Geobacillus thermodenitrificans NG80-2]
gi|166234670|sp|A4IJJ0.1|RL4_GEOTN RecName: Full=50S ribosomal protein L4
gi|134265299|gb|ABO65494.1| Ribosomal protein L4 [Geobacillus thermodenitrificans NG80-2]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G+ IGE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGQTIGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S + +V+++
Sbjct: 70 TGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENDIVVLDQL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTKE ++ + +D +KA + E++ENV S+RNI +K++ +N+ D
Sbjct: 130 S--LEAPKTKEMVKILNNLAVD--RKALIVTDELNENVYLSARNIPGVKVVAANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L + LV+T + V+
Sbjct: 186 VLSHDKLVITKAAVE 200
>gi|350269369|ref|YP_004880677.1| 50S ribosomal protein L4 [Oscillibacter valericigenes Sjm18-20]
gi|348594211|dbj|BAK98171.1| 50S ribosomal protein L4 [Oscillibacter valericigenes Sjm18-20]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ +G K+GE L + AVVH A+ + N R+GT S LTR EV GGG+K
Sbjct: 4 VEVLNMSGTKVGEVTLSDAVFGIEPNEAVVHEAVKNHLANCRQGTQSALTRAEVSGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GG+VF PKPRD+S +NKK +RLA+ + +++ AA
Sbjct: 64 PWRQKGTGHARQGSTRAPQWTHGGIVFAPKPRDYSYVLNKKTRRLALKSVLSAKAADGEI 123
Query: 174 IVVEEFDGKFERPKT---KEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
IVV+ K + KT ++F++A++ G KA ++ E + V KS+RNI +
Sbjct: 124 IVVDAI--KMDAIKTADFRKFLDAVKADG-----KAMVVIPEKDDAVVKSARNIPGVSTT 176
Query: 231 TPRTLNLFDILDAETLVL 248
T L+++DIL+A+ LV+
Sbjct: 177 TATILSVYDILNAKKLVI 194
>gi|402836648|ref|ZP_10885182.1| 50S ribosomal protein L4 [Mogibacterium sp. CM50]
gi|402270567|gb|EJU19827.1| 50S ribosomal protein L4 [Mogibacterium sp. CM50]
Length = 207
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 6/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ G ++GE L+ + + V + + N+R+GT S TR EVRGGG
Sbjct: 2 AKVTMLNMAGAEVGEITLNDEIFGIEPNEFAVQTVIKNYLANQRQGTQSAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGR R+GS P + GGG+VF PKPRD+ + KK KRLA+ + +++ A
Sbjct: 62 RKPFRQKGTGRHRQGSTTDPTQVGGGIVFAPKPRDYRYSVPKKVKRLALKSVLSAKVADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKML 230
IV++E KF+ PKTKE ++ + D K T +VM E ENV +S+ NI ++
Sbjct: 122 EIIVLDEL--KFDEPKTKEMVKVLDNIKADKK---TLIVMDEKDENVVRSASNIQGVRTA 176
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
T+N+++I++ +LVLT + + + Y
Sbjct: 177 LVGTMNVYEIINHYSLVLTKAAAERIEEVY 206
>gi|299830378|ref|YP_003734593.1| ribosomal protein L4 [Kryptoperidinium foliaceum]
gi|297385080|gb|ADI40378.1| ribosomal protein L4 [Kryptoperidinium foliaceum]
Length = 215
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 114/179 (63%), Gaps = 2/179 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ L+ ++R+GT ST TR EVRGGGRKP+ QK TGRAR GSN +PL GGGV+FG
Sbjct: 37 LLHKDLLRHYNSQRQGTLSTKTRSEVRGGGRKPWRQKGTGRARAGSNTSPLWKGGGVIFG 96
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKP+ SIK+NKKE+RLA+ T + + + +VVE + KTK F++ + ++
Sbjct: 97 PKPKTISIKLNKKERRLALQTLLYNKKNS--ILVVENLENAITDSKTKSFLKICQDCSIN 154
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
Q +V E + ++ ++ NI +++++ LN F +L+A+ +++TP ++ + Y
Sbjct: 155 LDQPVLVVVNEKTLPLKLATNNIKSIELILASQLNTFSLLNAKQILVTPLALNTIQEVY 213
>gi|296449798|ref|ZP_06891567.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP08]
gi|296877862|ref|ZP_06901884.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP07]
gi|296261396|gb|EFH08222.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP08]
gi|296431162|gb|EFH16987.1| ribosomal protein L4/L1 family protein [Clostridium difficile
NAP07]
Length = 217
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L+ +G+ +GE L + V++ + + NKR+GT S TR EVRGGGRK
Sbjct: 14 LNVLNVSGQNVGEIELSDSIFGVEVNGHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 73
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GGGV F PKPR + + KK +RLA+ +A++S
Sbjct: 74 PWKQKGTGRARQGSTRSVQWVGGGVAFAPKPRSYKYTLPKKVRRLAMKSALSSKVQNSEV 133
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + + PKTKEF + + ++ +KA ++ + ++N+ KS+RNI ++
Sbjct: 134 IVLDALN--MDAPKTKEFAQILNN--INAAKKALVVIADKNDNIIKSARNIEGVQTALVN 189
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL ++ ++T V
Sbjct: 190 TMNVYDILKYDSFIITTDAV 209
>gi|440785462|ref|ZP_20962219.1| 50S ribosomal protein L4 [Clostridium pasteurianum DSM 525]
gi|440218358|gb|ELP57580.1| 50S ribosomal protein L4 [Clostridium pasteurianum DSM 525]
Length = 206
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L + + +H+ ++ + NKR+G S TR EV GGG KP+ QK T
Sbjct: 11 GKKVGDIELSSEVFGTEVNSDALHQVVVALLANKRQGNQSAKTRSEVSGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GG+VF PKPRD+ + + K +R+A+ +A++S A IV+E+ +
Sbjct: 71 GRARQGSIRSPQWIHGGIVFAPKPRDYRMSVPKSMRRVAMKSALSSKVAENEIIVLEDLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTKE ++ + + +KA +V E ++NV KS RNI + ++ LN++DI
Sbjct: 131 --FEVPKTKEVVKLLNAFN---SKKALIVVAESNQNVYKSVRNIQGVTVIPANNLNVYDI 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L + ++T V + Y
Sbjct: 186 LKYDNFIITKDAVSKIEEVYA 206
>gi|295694838|ref|YP_003588076.1| 50S ribosomal protein L4 [Kyrpidia tusciae DSM 2912]
gi|295410440|gb|ADG04932.1| ribosomal protein L4/L1e [Kyrpidia tusciae DSM 2912]
Length = 207
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE++GE L K D AV+H+A++ + N R+GT +T R VRGGGRKP+
Sbjct: 6 VYNAAGEQVGELELSEKVFGVDVKPAVLHQAVVAQLANARQGTRATKNRALVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGG VFGP+PRD+S+++ KK +RLAI A++S + + IV
Sbjct: 66 RQKGTGRARQGSIRAPQWVGGGTVFGPQPRDFSMRLPKKLRRLAIRGALSSKVSEGSLIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ + E PKTKE I + L KA + +++ S+RNI +K L +
Sbjct: 126 LDSL--QIEAPKTKEMIRILSN--LKVPGKALVVGEGLNQPAHLSARNIPGVKYLPATDI 181
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D+L + LV+T + V
Sbjct: 182 NVVDLLHHDHLVVTTAAV 199
>gi|227871801|ref|ZP_03990205.1| ribosomal protein L4 [Oribacterium sinus F0268]
gi|227842364|gb|EEJ52590.1| ribosomal protein L4 [Oribacterium sinus F0268]
Length = 206
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G+ L+ A ++H A++ + NKR+GT LTR EV GGGRK
Sbjct: 4 VSVFNMQGKEVGKMDLNDAIFAAPVHEHLLHLAVVAQLANKRQGTQKALTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD++ +NKKEKR A+ +A+++A A
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTGMNKKEKRAALKSALSNAVAENKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E +F+ KTK F + + ++ KA L+ + +N S+RNI +K
Sbjct: 124 IVLDEI--RFDEIKTKNFQSMLDAFKVN---KAFVLLDQNDQNTVLSARNIQNVKTAQVN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++D+L T++ T + +
Sbjct: 179 ELNVYDVLKYGTVLATKAAL 198
>gi|163938119|ref|YP_001643003.1| 50S ribosomal protein L4 [Bacillus weihenstephanensis KBAB4]
gi|229009620|ref|ZP_04166846.1| 50S ribosomal protein L4 [Bacillus mycoides DSM 2048]
gi|229015513|ref|ZP_04172511.1| 50S ribosomal protein L4 [Bacillus cereus AH1273]
gi|229021722|ref|ZP_04178304.1| 50S ribosomal protein L4 [Bacillus cereus AH1272]
gi|229053957|ref|ZP_04195391.1| 50S ribosomal protein L4 [Bacillus cereus AH603]
gi|229131119|ref|ZP_04260031.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST196]
gi|229165099|ref|ZP_04292894.1| 50S ribosomal protein L4 [Bacillus cereus AH621]
gi|423370693|ref|ZP_17348098.1| 50S ribosomal protein L4 [Bacillus cereus VD142]
gi|423393436|ref|ZP_17370662.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-3]
gi|423421723|ref|ZP_17398812.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-1]
gi|423456268|ref|ZP_17433121.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X1-1]
gi|423473136|ref|ZP_17449878.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-2]
gi|423485410|ref|ZP_17462092.1| 50S ribosomal protein L4 [Bacillus cereus BtB2-4]
gi|423491135|ref|ZP_17467779.1| 50S ribosomal protein L4 [Bacillus cereus CER057]
gi|423502069|ref|ZP_17478686.1| 50S ribosomal protein L4 [Bacillus cereus CER074]
gi|423514625|ref|ZP_17491132.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-1]
gi|423514963|ref|ZP_17491444.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-4]
gi|423526387|ref|ZP_17502836.1| 50S ribosomal protein L4 [Bacillus cereus HuA4-10]
gi|423556893|ref|ZP_17533196.1| 50S ribosomal protein L4 [Bacillus cereus MC67]
gi|423597000|ref|ZP_17573010.1| 50S ribosomal protein L4 [Bacillus cereus VD048]
gi|423602360|ref|ZP_17578360.1| 50S ribosomal protein L4 [Bacillus cereus VD078]
gi|423614599|ref|ZP_17590456.1| 50S ribosomal protein L4 [Bacillus cereus VD107]
gi|423665376|ref|ZP_17640515.1| 50S ribosomal protein L4 [Bacillus cereus VDM022]
gi|423671560|ref|ZP_17646564.1| 50S ribosomal protein L4 [Bacillus cereus VDM034]
gi|423672636|ref|ZP_17647575.1| 50S ribosomal protein L4 [Bacillus cereus VDM062]
gi|226730619|sp|A9VP78.1|RL4_BACWK RecName: Full=50S ribosomal protein L4
gi|163860316|gb|ABY41375.1| ribosomal protein L4/L1e [Bacillus weihenstephanensis KBAB4]
gi|228618362|gb|EEK75392.1| 50S ribosomal protein L4 [Bacillus cereus AH621]
gi|228652332|gb|EEL08257.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST196]
gi|228721375|gb|EEL72896.1| 50S ribosomal protein L4 [Bacillus cereus AH603]
gi|228739590|gb|EEL90004.1| 50S ribosomal protein L4 [Bacillus cereus AH1272]
gi|228745800|gb|EEL95804.1| 50S ribosomal protein L4 [Bacillus cereus AH1273]
gi|228751642|gb|EEM01442.1| 50S ribosomal protein L4 [Bacillus mycoides DSM 2048]
gi|401073429|gb|EJP81851.1| 50S ribosomal protein L4 [Bacillus cereus VD142]
gi|401096842|gb|EJQ04879.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-1]
gi|401130867|gb|EJQ38522.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X1-1]
gi|401151463|gb|EJQ58914.1| 50S ribosomal protein L4 [Bacillus cereus CER074]
gi|401162060|gb|EJQ69419.1| 50S ribosomal protein L4 [Bacillus cereus CER057]
gi|401163437|gb|EJQ70783.1| 50S ribosomal protein L4 [Bacillus cereus HuA4-10]
gi|401168464|gb|EJQ75727.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-4]
gi|401194208|gb|EJR01200.1| 50S ribosomal protein L4 [Bacillus cereus MC67]
gi|401218177|gb|EJR24861.1| 50S ribosomal protein L4 [Bacillus cereus VD048]
gi|401225899|gb|EJR32443.1| 50S ribosomal protein L4 [Bacillus cereus VD078]
gi|401237443|gb|EJR43895.1| 50S ribosomal protein L4 [Bacillus cereus VD107]
gi|401290283|gb|EJR95978.1| 50S ribosomal protein L4 [Bacillus cereus VDM022]
gi|401291949|gb|EJR97614.1| 50S ribosomal protein L4 [Bacillus cereus VDM034]
gi|401311496|gb|EJS16791.1| 50S ribosomal protein L4 [Bacillus cereus VDM062]
gi|401629543|gb|EJS47356.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-3]
gi|402426634|gb|EJV58755.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-2]
gi|402441601|gb|EJV73551.1| 50S ribosomal protein L4 [Bacillus cereus BtB2-4]
gi|402442025|gb|EJV73969.1| 50S ribosomal protein L4 [Bacillus cereus HuA2-1]
Length = 207
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+
Sbjct: 6 VYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +
Sbjct: 126 LEDL--VLNAPKTKDMVAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + L++T + V+
Sbjct: 182 NVLDVLHHDKLIMTKAAVE 200
>gi|317126862|ref|YP_004093144.1| 50S ribosomal protein L4/L1e [Bacillus cellulosilyticus DSM 2522]
gi|315471810|gb|ADU28413.1| ribosomal protein L4/L1e [Bacillus cellulosilyticus DSM 2522]
Length = 207
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 121/194 (62%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG ++G+ L + +V+ A++ ++R+GT +T R +VRGGGRKP+ QK
Sbjct: 10 TGSQVGDIELSEAIFGIEPNESVLFDAVVMQQASQRQGTHATKGRSDVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP+PR ++ KI KK++RLA+ +A++S A+ +V+E
Sbjct: 70 TGRARQGSIRSPQWVGGGVVFGPQPRSYAYKIPKKQRRLALKSALSSKVNADEILVLEGL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ F+ PKTKE + GL +KA + + ++ V S+RNI +K +T +N+ D
Sbjct: 130 N--FDSPKTKEMKAVLS--GLSVGRKALVVTADYNDAVALSARNIPGVKFITAEGVNVLD 185
Query: 240 ILDAETLVLTPSTV 253
+L+ + L++T V
Sbjct: 186 LLNYDQLIITQDAV 199
>gi|298243967|ref|ZP_06967774.1| ribosomal protein L4/L1e [Ktedonobacter racemifer DSM 44963]
gi|297557021|gb|EFH90885.1| ribosomal protein L4/L1e [Ktedonobacter racemifer DSM 44963]
Length = 234
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 132/233 (56%), Gaps = 9/233 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE + + L + AV+H+ + + N+R+G AST TR EV GG +KPY
Sbjct: 6 VYNMAGEAVEQLELSEQVFGVTPNMAVLHQVVTAQLVNRRQGNASTKTRSEVSGGNKKPY 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGG VFGPKP + + KK +RLAI + ++ A ++ I+
Sbjct: 66 RQKGTGRARQGSTRAPQFRGGGTVFGPKPHPYHHDVPKKMRRLAIRSVLSDKVANQSLII 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V + + E P+TK+ +E +++ +K ++ + ENV S+RNI + K+ ++
Sbjct: 126 VNKLE--METPRTKDMLELLKKLPSSEGKKVLMMLPKRDENVVLSTRNIPSAKVQHVSSI 183
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYGVEFEGDGDEEEEESEAREAGEESDAAE 288
N+ ++L + +V+TP TV ++ +G EG EE + G+E+ AAE
Sbjct: 184 NVVELLKHDYIVMTPKTVRWIELVFG---EGLSAEE----ATLKIGDEATAAE 229
>gi|150392159|ref|YP_001322208.1| 50S ribosomal protein L4 [Alkaliphilus metalliredigens QYMF]
gi|166990944|sp|A6TWI1.1|RL4_ALKMQ RecName: Full=50S ribosomal protein L4
gi|149952021|gb|ABR50549.1| ribosomal protein L4/L1e [Alkaliphilus metalliredigens QYMF]
Length = 207
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G+K+ E L + V++ A+ + NKR+GT S TR EVRGGGRK
Sbjct: 4 VAVYNVSGQKVSEMELSENIFGVEVNEHVLYEAVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR G+ R+PL GGG VF PKPRD S + +K KRLA+ +A+ S E
Sbjct: 64 PWKQKGTGRARAGTIRSPLWIGGGTVFAPKPRDHSYTLPRKVKRLALKSALTSKVNNEEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++E + PKTK+ + ++ L+ +K +V E +E + KS+ NI +
Sbjct: 124 LVLDELS--LDTPKTKDMVNILK--NLNADKKVLLVVGEKNEAIIKSASNIPGVTTALVN 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
T+N++DIL+ + ++T V+ + Y
Sbjct: 180 TINVYDILNHDKFIITKDAVEKVEEVYA 207
>gi|317131370|ref|YP_004090684.1| 50S ribosomal protein L4 [Ethanoligenens harbinense YUAN-3]
gi|315469349|gb|ADU25953.1| ribosomal protein L4/L1e [Ethanoligenens harbinense YUAN-3]
Length = 207
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE++GE L + + +H ++ + N+R+GT STLTR EV GGGRKP+
Sbjct: 6 VFNIAGEQVGEIELADSVFGIEPNKTALHTVVVNYLANQRQGTQSTLTRSEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TG AR+GS R P GG+ GPKPR ++ +NKK +RLA+ +A+++ AA +V
Sbjct: 66 RQKGTGHARQGSTRAPQWKHGGIALGPKPRSYTYTVNKKVRRLALKSALSAKLAAGELVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ KTK+ + + ++ + +KA F+ V+EN+ KS+RNI +K + +L
Sbjct: 126 LDAIS--LPEIKTKQVVTILSKF--ETSKKALFVTAGVNENLVKSARNIPGVKTASTGSL 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N++D+LD+ ++ V L Y
Sbjct: 182 NVYDLLDSNKFFISKDAVAALEEVY 206
>gi|150020846|ref|YP_001306200.1| 50S ribosomal protein L4 [Thermosipho melanesiensis BI429]
gi|166199920|sp|A6LLL4.1|RL4_THEM4 RecName: Full=50S ribosomal protein L4
gi|149793367|gb|ABR30815.1| ribosomal protein L4/L1e [Thermosipho melanesiensis BI429]
Length = 221
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 14/214 (6%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + GE IG L + A + + V+ R + + N R GTAST TRGEV GGG
Sbjct: 2 AKVDLFNIKGENIGTVELKEEVFAIEPNQDVMWRYIDMQLTNSRAGTASTKTRGEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R P GGV GPKPR + ++NKK KRLA+ +A++
Sbjct: 62 RKPWIQKHTGRARQGSIRAPHWRHGGVAHGPKPRVYFKRLNKKMKRLALKSALSLRLKEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKM 229
N +VV+ D KFE+P+TK+ E ++ GL+ ++ L + S ENV+ S RNI +K+
Sbjct: 122 NLVVVD--DIKFEKPRTKDLREVLKNLGLENQKVLIVLPKKESEYENVKISGRNIPGVKV 179
Query: 230 LTPRT----------LNLFDILDAETLVLTPSTV 253
L LN++DIL+ + LVL TV
Sbjct: 180 LIADNPGVDRVNIDGLNVYDILNHDKLVLLQGTV 213
>gi|15612698|ref|NP_241001.1| 50S ribosomal protein L4 [Bacillus halodurans C-125]
gi|7674304|sp|Q9Z9L3.1|RL4_BACHD RecName: Full=50S ribosomal protein L4
gi|4512405|dbj|BAA75272.1| rplD [Bacillus halodurans]
gi|10172747|dbj|BAB03854.1| 50S ribosomal protein L4 [Bacillus halodurans C-125]
Length = 207
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G ++G+ L + V+H A++ + R+GT T TR EVRGGGRKP+ QK T
Sbjct: 11 GSQVGDIELSDAVFGIEPNENVLHDAVVMQQASLRQGTHKTKTRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S AE +V+E
Sbjct: 71 GRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKAEEIVVLESL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE + GL +KA + + ++NV S+RNI + +T +N+ D+
Sbjct: 130 -ALEAPKTKEMASILS--GLSVDRKALVVTADYNDNVALSARNIPGVTFVTAEGVNVLDV 186
Query: 241 LDAETLVLTPSTVD 254
+ + L++T V+
Sbjct: 187 IKHDKLIITKDAVE 200
>gi|340356780|ref|ZP_08679421.1| 50S ribosomal protein L4 [Sporosarcina newyorkensis 2681]
gi|339620118|gb|EGQ24689.1| 50S ribosomal protein L4 [Sporosarcina newyorkensis 2681]
Length = 207
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++S TG +G+ L+ + AV++ A++ + R+G TR EV GGGRK
Sbjct: 4 VSVVSQTGSAVGDIELNDAIFGIEPNEAVLYEAIVQQQASLRQGNHKVKTRAEVAGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLA+ +A+++ AE
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKMPKKVRRLALLSALSTKVRAEEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ F+ PKTK F++ + L +KA F+ ++ E V S+RNI + ++T
Sbjct: 124 IVVDNL--AFDAPKTKGFVKVLE--DLSITKKALFVTADLEETVALSARNIPGVSVVTAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D++ + LV+T + V+
Sbjct: 180 GINVLDLVGHDQLVMTKAAVE 200
>gi|56418642|ref|YP_145960.1| 50S ribosomal protein L4 [Geobacillus kaustophilus HTA426]
gi|261417608|ref|YP_003251290.1| 50S ribosomal protein L4 [Geobacillus sp. Y412MC61]
gi|297528483|ref|YP_003669758.1| ribosomal protein L4/L1e [Geobacillus sp. C56-T3]
gi|319765266|ref|YP_004130767.1| 50S ribosomal protein L4 [Geobacillus sp. Y412MC52]
gi|375006921|ref|YP_004980551.1| 50S ribosomal protein L4 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236416|ref|YP_007400474.1| 50S ribosomal protein L4 [Geobacillus sp. GHH01]
gi|81558135|sp|Q5L3Z6.1|RL4_GEOKA RecName: Full=50S ribosomal protein L4
gi|56378484|dbj|BAD74392.1| 50S ribosomal protein L4 [Geobacillus kaustophilus HTA426]
gi|261374065|gb|ACX76808.1| ribosomal protein L4/L1e [Geobacillus sp. Y412MC61]
gi|297251735|gb|ADI25181.1| ribosomal protein L4/L1e [Geobacillus sp. C56-T3]
gi|317110132|gb|ADU92624.1| ribosomal protein L4/L1e [Geobacillus sp. Y412MC52]
gi|359285767|gb|AEV17451.1| 50S ribosomal protein L4 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205258|gb|AGE20723.1| 50S ribosomal protein L4 [Geobacillus sp. GHH01]
Length = 207
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G+ +GE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGQTVGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S + +V+++
Sbjct: 70 TGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENDIVVLDQL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTKE ++ + +D +KA + E++ENV S+RNI +K++ +N+ D
Sbjct: 130 S--LEAPKTKEMVKILNNLSVD--RKALIVTDELNENVYLSARNIPGVKVVAANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|229083431|ref|ZP_04215779.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-44]
gi|228699864|gb|EEL52501.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-44]
Length = 207
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+
Sbjct: 6 VYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +
Sbjct: 126 LEDL--VLNAPKTKDMVAVLK--GLPVEKKALIVTADANESVELSARNIPGVTVITADGV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + L++T + V+
Sbjct: 182 NVLDVLHHDKLIMTKAAVE 200
>gi|11467470|ref|NP_043616.1| ribosomal protein L4 [Odontella sinensis]
gi|1350651|sp|P49546.1|RK4_ODOSI RecName: Full=50S ribosomal protein L4, chloroplastic
gi|1185165|emb|CAA91648.1| 50S ribosomal protein L4 [Odontella sinensis]
Length = 215
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ ++ ++R+GT ST TR EVRGGGRKP+ QK TGRAR GS+R+PL GGGV+FG
Sbjct: 37 LIHKDILRHQSSQRQGTISTKTRSEVRGGGRKPWRQKGTGRARAGSSRSPLWKGGGVIFG 96
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPR +K+NKKE++LA+ T + + N +++ + + PKTK F + ++
Sbjct: 97 PKPRKIILKLNKKERKLALQTLLYN--KRNNISIIDNLETNLDLPKTKTFYSLCKNCEIN 154
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
QK +V E + ++ ++RNI ++++ LN F +L A+ +++TP V
Sbjct: 155 LDQKILIIVGEKTIPLKLATRNIKNVELILASNLNTFSLLKAKQILMTPLAV 206
>gi|260655382|ref|ZP_05860870.1| ribosomal protein L4/L1 family protein [Jonquetella anthropi E3_33
E1]
gi|424845194|ref|ZP_18269805.1| 50S ribosomal protein L4, bacterial/organelle [Jonquetella anthropi
DSM 22815]
gi|260629830|gb|EEX48024.1| ribosomal protein L4/L1 family protein [Jonquetella anthropi E3_33
E1]
gi|363986632|gb|EHM13462.1| 50S ribosomal protein L4, bacterial/organelle [Jonquetella anthropi
DSM 22815]
Length = 207
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 7/208 (3%)
Query: 54 LPILSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ IL+F GE +G+ L D P + A+ H+ ++ N R+GTA RGEVRGGGR
Sbjct: 4 IKILNFAGEVVGDLELSDAVFGVPFHSSAI-HQVVVAQQANARQGTACAKDRGEVRGGGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TGRAR GS R+PL GGGVV GPKPRD+ +K+NKK + LA+ +A++ A
Sbjct: 63 KPWRQKHTGRARAGSIRSPLWAGGGVVHGPKPRDYFLKVNKKVRALAMRSALSVRAGESR 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
VE F E P TK+ + + G +K ++ +ENV +S+ NI +K+L
Sbjct: 123 LFAVEGFS--LEAPSTKKMLSFLAAVG---ARKPLIVLDSRNENVIRSAANIQGVKVLHM 177
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRY 260
++N+ D++ + LV T + + L Y
Sbjct: 178 DSINVLDLVRHDGLVATTAVLKRLEEVY 205
>gi|392423895|ref|YP_006464889.1| 50S ribosomal protein L4, bacterial/organelle [Desulfosporosinus
acidiphilus SJ4]
gi|391353858|gb|AFM39557.1| 50S ribosomal protein L4, bacterial/organelle [Desulfosporosinus
acidiphilus SJ4]
Length = 207
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 122/200 (61%), Gaps = 8/200 (4%)
Query: 56 ILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+++ G +GE L ++ P+ V+H A+++ + + R GT S L RGEVRGGGRK
Sbjct: 6 VVNMQGAPVGEIELSDNIFGITPNVP--VLHSAVVSQLASLRHGTQSALLRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS+R+P+ GGGVVF PKPR + K+ KK +RLA+ +A++S +
Sbjct: 64 PWRQKGTGRARSGSSRSPVWRGGGVVFAPKPRKYGFKLPKKVRRLALHSALSSKVIEQQL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ K E KT+E ++ ++ L +KA + EV E V +S+ NI + +
Sbjct: 124 IVLDAL--KLEEVKTREIVKLLK--ALQVSKKAMIVTDEVDEAVFRSASNIEGVVTMDVA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D+L+ + LV+T + +
Sbjct: 180 GMNVVDLLNHDVLVMTKAAI 199
>gi|423399384|ref|ZP_17376582.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-1]
gi|423409840|ref|ZP_17386989.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-3]
gi|401644484|gb|EJS62174.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-1]
gi|401652380|gb|EJS69937.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-3]
Length = 207
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+
Sbjct: 6 VYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +
Sbjct: 126 LEDL--VLNAPKTKDMVAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGV 181
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D+L + L++T + V
Sbjct: 182 NVLDVLHHDKLIMTKAAV 199
>gi|30018381|ref|NP_830012.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 14579]
gi|30260302|ref|NP_842679.1| 50S ribosomal protein L4 [Bacillus anthracis str. Ames]
gi|42779192|ref|NP_976439.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 10987]
gi|47525367|ref|YP_016716.1| 50S ribosomal protein L4 [Bacillus anthracis str. 'Ames Ancestor']
gi|49183145|ref|YP_026397.1| 50S ribosomal protein L4 [Bacillus anthracis str. Sterne]
gi|49476718|ref|YP_034463.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145106|ref|YP_081722.1| 50S ribosomal protein L4 [Bacillus cereus E33L]
gi|118475880|ref|YP_893031.1| 50S ribosomal protein L4 [Bacillus thuringiensis str. Al Hakam]
gi|206972278|ref|ZP_03233225.1| 50S ribosomal protein L4 [Bacillus cereus AH1134]
gi|217957686|ref|YP_002336230.1| 50S ribosomal protein L4 [Bacillus cereus AH187]
gi|218234634|ref|YP_002364960.1| 50S ribosomal protein L4 [Bacillus cereus B4264]
gi|218895246|ref|YP_002443657.1| 50S ribosomal protein L4 [Bacillus cereus G9842]
gi|218901315|ref|YP_002449149.1| 50S ribosomal protein L4 [Bacillus cereus AH820]
gi|222093881|ref|YP_002527931.1| 50S ribosomal protein L4 [Bacillus cereus Q1]
gi|225862163|ref|YP_002747541.1| 50S ribosomal protein L4 [Bacillus cereus 03BB102]
gi|227812784|ref|YP_002812793.1| 50S ribosomal protein L4 [Bacillus anthracis str. CDC 684]
gi|228898864|ref|ZP_04063146.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 4222]
gi|228905908|ref|ZP_04069805.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 200]
gi|228912850|ref|ZP_04076497.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228919061|ref|ZP_04082440.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228925364|ref|ZP_04088460.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931613|ref|ZP_04094519.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228937414|ref|ZP_04100060.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228943917|ref|ZP_04106302.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228950659|ref|ZP_04112793.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228956552|ref|ZP_04118348.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228963211|ref|ZP_04124380.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228970300|ref|ZP_04130959.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976870|ref|ZP_04137282.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|228983366|ref|ZP_04143579.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229027959|ref|ZP_04184112.1| 50S ribosomal protein L4 [Bacillus cereus AH1271]
gi|229041016|ref|ZP_04189779.1| 50S ribosomal protein L4 [Bacillus cereus AH676]
gi|229067876|ref|ZP_04201193.1| 50S ribosomal protein L4 [Bacillus cereus F65185]
gi|229074172|ref|ZP_04207218.1| 50S ribosomal protein L4 [Bacillus cereus Rock4-18]
gi|229089242|ref|ZP_04220523.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-42]
gi|229094833|ref|ZP_04225838.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-29]
gi|229100910|ref|ZP_04231714.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-28]
gi|229107797|ref|ZP_04237433.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-15]
gi|229113787|ref|ZP_04243222.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-3]
gi|229119773|ref|ZP_04249034.1| 50S ribosomal protein L4 [Bacillus cereus 95/8201]
gi|229125628|ref|ZP_04254660.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-Cer4]
gi|229136957|ref|ZP_04265584.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST26]
gi|229142917|ref|ZP_04271358.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST24]
gi|229148520|ref|ZP_04276776.1| 50S ribosomal protein L4 [Bacillus cereus m1550]
gi|229153889|ref|ZP_04282019.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 4342]
gi|229159284|ref|ZP_04287308.1| 50S ribosomal protein L4 [Bacillus cereus R309803]
gi|229170962|ref|ZP_04298563.1| 50S ribosomal protein L4 [Bacillus cereus MM3]
gi|229176711|ref|ZP_04304115.1| 50S ribosomal protein L4 [Bacillus cereus 172560W]
gi|229182505|ref|ZP_04309756.1| 50S ribosomal protein L4 [Bacillus cereus BGSC 6E1]
gi|229188396|ref|ZP_04315444.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 10876]
gi|229194501|ref|ZP_04321304.1| 50S ribosomal protein L4 [Bacillus cereus m1293]
gi|229602888|ref|YP_002864762.1| 50S ribosomal protein L4 [Bacillus anthracis str. A0248]
gi|254684385|ref|ZP_05148245.1| 50S ribosomal protein L4 [Bacillus anthracis str. CNEVA-9066]
gi|254720833|ref|ZP_05182625.1| 50S ribosomal protein L4 [Bacillus anthracis str. A1055]
gi|254733588|ref|ZP_05191308.1| 50S ribosomal protein L4 [Bacillus anthracis str. Western North
America USA6153]
gi|254739508|ref|ZP_05197205.1| 50S ribosomal protein L4 [Bacillus anthracis str. Kruger B]
gi|254751227|ref|ZP_05203265.1| 50S ribosomal protein L4 [Bacillus anthracis str. Vollum]
gi|254756766|ref|ZP_05208795.1| 50S ribosomal protein L4 [Bacillus anthracis str. Australia 94]
gi|296500945|ref|YP_003662645.1| 50S ribosomal protein L4 [Bacillus thuringiensis BMB171]
gi|300119577|ref|ZP_07057121.1| 50S ribosomal protein L4 [Bacillus cereus SJ1]
gi|301051848|ref|YP_003790059.1| 50S ribosomal protein L4 [Bacillus cereus biovar anthracis str. CI]
gi|365164085|ref|ZP_09360171.1| 50S ribosomal protein L4 [Bacillus sp. 7_6_55CFAA_CT2]
gi|375282209|ref|YP_005102644.1| 50S ribosomal protein L4 [Bacillus cereus NC7401]
gi|376264140|ref|YP_005116852.1| 50S ribosomal protein L4 [Bacillus cereus F837/76]
gi|384178018|ref|YP_005563780.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|384184197|ref|YP_005570093.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar chinensis
CT-43]
gi|386733977|ref|YP_006207158.1| 50S ribosomal protein L4 [Bacillus anthracis str. H9401]
gi|402554301|ref|YP_006595572.1| 50S ribosomal protein L4 [Bacillus cereus FRI-35]
gi|402562796|ref|YP_006605520.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-771]
gi|407708059|ref|YP_006831644.1| glycosyltransferase [Bacillus thuringiensis MC28]
gi|410672482|ref|YP_006924853.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|421510439|ref|ZP_15957332.1| 50S ribosomal protein L4 [Bacillus anthracis str. UR-1]
gi|421640527|ref|ZP_16081109.1| 50S ribosomal protein L4 [Bacillus anthracis str. BF1]
gi|423357598|ref|ZP_17335193.1| 50S ribosomal protein L4 [Bacillus cereus IS075]
gi|423364465|ref|ZP_17341955.1| 50S ribosomal protein L4 [Bacillus cereus VD022]
gi|423376297|ref|ZP_17353611.1| 50S ribosomal protein L4 [Bacillus cereus AND1407]
gi|423381842|ref|ZP_17359125.1| 50S ribosomal protein L4 [Bacillus cereus BAG1O-2]
gi|423387403|ref|ZP_17364657.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-2]
gi|423405165|ref|ZP_17382338.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-2]
gi|423415989|ref|ZP_17393109.1| 50S ribosomal protein L4 [Bacillus cereus BAG3O-2]
gi|423422344|ref|ZP_17399375.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-2]
gi|423428217|ref|ZP_17405221.1| 50S ribosomal protein L4 [Bacillus cereus BAG4O-1]
gi|423439434|ref|ZP_17416372.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X12-1]
gi|423439711|ref|ZP_17416617.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X2-1]
gi|423450132|ref|ZP_17427010.1| 50S ribosomal protein L4 [Bacillus cereus BAG5O-1]
gi|423462615|ref|ZP_17439409.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X2-1]
gi|423467968|ref|ZP_17444736.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-1]
gi|423480008|ref|ZP_17456722.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-1]
gi|423507863|ref|ZP_17484430.1| 50S ribosomal protein L4 [Bacillus cereus HD73]
gi|423526591|ref|ZP_17503036.1| 50S ribosomal protein L4 [Bacillus cereus HuB1-1]
gi|423537368|ref|ZP_17513786.1| 50S ribosomal protein L4 [Bacillus cereus HuB2-9]
gi|423543096|ref|ZP_17519484.1| 50S ribosomal protein L4 [Bacillus cereus HuB4-10]
gi|423543598|ref|ZP_17519956.1| 50S ribosomal protein L4 [Bacillus cereus HuB5-5]
gi|423553955|ref|ZP_17530282.1| 50S ribosomal protein L4 [Bacillus cereus ISP3191]
gi|423565531|ref|ZP_17541807.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A1]
gi|423572102|ref|ZP_17548316.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A12]
gi|423578037|ref|ZP_17554156.1| 50S ribosomal protein L4 [Bacillus cereus MSX-D12]
gi|423578518|ref|ZP_17554629.1| 50S ribosomal protein L4 [Bacillus cereus VD014]
gi|423590602|ref|ZP_17566664.1| 50S ribosomal protein L4 [Bacillus cereus VD045]
gi|423608064|ref|ZP_17583957.1| 50S ribosomal protein L4 [Bacillus cereus VD102]
gi|423620281|ref|ZP_17596112.1| 50S ribosomal protein L4 [Bacillus cereus VD115]
gi|423626947|ref|ZP_17602722.1| 50S ribosomal protein L4 [Bacillus cereus VD148]
gi|423632020|ref|ZP_17607766.1| 50S ribosomal protein L4 [Bacillus cereus VD154]
gi|423638114|ref|ZP_17613766.1| 50S ribosomal protein L4 [Bacillus cereus VD156]
gi|423645070|ref|ZP_17620686.1| 50S ribosomal protein L4 [Bacillus cereus VD166]
gi|423646246|ref|ZP_17621816.1| 50S ribosomal protein L4 [Bacillus cereus VD169]
gi|423653045|ref|ZP_17628344.1| 50S ribosomal protein L4 [Bacillus cereus VD200]
gi|434378756|ref|YP_006613400.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-789]
gi|449086778|ref|YP_007419219.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|452196489|ref|YP_007476570.1| LSU ribosomal protein L4p (L1e) [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|46576767|sp|Q81J41.1|RL4_BACCR RecName: Full=50S ribosomal protein L4
gi|46576769|sp|Q81VS9.1|RL4_BACAN RecName: Full=50S ribosomal protein L4
gi|81570005|sp|Q73F95.1|RL4_BACC1 RecName: Full=50S ribosomal protein L4
gi|81614034|sp|Q6HPQ7.1|RL4_BACHK RecName: Full=50S ribosomal protein L4
gi|81689839|sp|Q63H89.1|RL4_BACCZ RecName: Full=50S ribosomal protein L4
gi|166234634|sp|A0R8I1.1|RL4_BACAH RecName: Full=50S ribosomal protein L4
gi|226730615|sp|B7JKC0.1|RL4_BACC0 RecName: Full=50S ribosomal protein L4
gi|226730616|sp|B7IT20.1|RL4_BACC2 RecName: Full=50S ribosomal protein L4
gi|226730617|sp|B7HJ49.1|RL4_BACC4 RecName: Full=50S ribosomal protein L4
gi|226730618|sp|B7HQU5.1|RL4_BACC7 RecName: Full=50S ribosomal protein L4
gi|254803712|sp|C3P9Q6.1|RL4_BACAA RecName: Full=50S ribosomal protein L4
gi|254803713|sp|C3LJ83.1|RL4_BACAC RecName: Full=50S ribosomal protein L4
gi|254803714|sp|C1ET40.1|RL4_BACC3 RecName: Full=50S ribosomal protein L4
gi|254803715|sp|B9IZJ5.1|RL4_BACCQ RecName: Full=50S ribosomal protein L4
gi|29893921|gb|AAP07213.1| LSU ribosomal protein L1E/L4P [Bacillus cereus ATCC 14579]
gi|30253623|gb|AAP24165.1| 50S ribosomal protein L4 [Bacillus anthracis str. Ames]
gi|42735107|gb|AAS39047.1| ribosomal protein L4 [Bacillus cereus ATCC 10987]
gi|47500515|gb|AAT29191.1| ribosomal protein L4 [Bacillus anthracis str. 'Ames Ancestor']
gi|49177072|gb|AAT52448.1| ribosomal protein L4 [Bacillus anthracis str. Sterne]
gi|49328274|gb|AAT58920.1| ribosomal protein L4 (50S ribosomal protein L4) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978575|gb|AAU20125.1| ribosomal protein L4 (50S ribosomal protein L4) [Bacillus cereus
E33L]
gi|118415105|gb|ABK83524.1| LSU ribosomal protein L4P [Bacillus thuringiensis str. Al Hakam]
gi|206732852|gb|EDZ50027.1| 50S ribosomal protein L4 [Bacillus cereus AH1134]
gi|217062939|gb|ACJ77189.1| ribosomal protein L4 [Bacillus cereus AH187]
gi|218162591|gb|ACK62583.1| ribosomal protein L4 [Bacillus cereus B4264]
gi|218538801|gb|ACK91199.1| ribosomal protein L4 [Bacillus cereus AH820]
gi|218543914|gb|ACK96308.1| ribosomal protein L4 [Bacillus cereus G9842]
gi|221237929|gb|ACM10639.1| ribosomal protein L4 (50S ribosomal protein L4) [Bacillus cereus
Q1]
gi|225787946|gb|ACO28163.1| 50S ribosomal protein L4 [Bacillus cereus 03BB102]
gi|227006772|gb|ACP16515.1| 50S ribosomal protein L4 [Bacillus anthracis str. CDC 684]
gi|228588967|gb|EEK46982.1| 50S ribosomal protein L4 [Bacillus cereus m1293]
gi|228595070|gb|EEK52841.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 10876]
gi|228600960|gb|EEK58529.1| 50S ribosomal protein L4 [Bacillus cereus BGSC 6E1]
gi|228606754|gb|EEK64171.1| 50S ribosomal protein L4 [Bacillus cereus 172560W]
gi|228612502|gb|EEK69723.1| 50S ribosomal protein L4 [Bacillus cereus MM3]
gi|228624176|gb|EEK80978.1| 50S ribosomal protein L4 [Bacillus cereus R309803]
gi|228629570|gb|EEK86267.1| 50S ribosomal protein L4 [Bacillus cereus ATCC 4342]
gi|228634936|gb|EEK91509.1| 50S ribosomal protein L4 [Bacillus cereus m1550]
gi|228640538|gb|EEK96927.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST24]
gi|228646495|gb|EEL02702.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-ST26]
gi|228657820|gb|EEL13626.1| 50S ribosomal protein L4 [Bacillus cereus BDRD-Cer4]
gi|228663674|gb|EEL19253.1| 50S ribosomal protein L4 [Bacillus cereus 95/8201]
gi|228669658|gb|EEL25065.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-3]
gi|228675646|gb|EEL30854.1| 50S ribosomal protein L4 [Bacillus cereus Rock1-15]
gi|228682489|gb|EEL36562.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-28]
gi|228688576|gb|EEL42449.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-29]
gi|228694081|gb|EEL47763.1| 50S ribosomal protein L4 [Bacillus cereus Rock3-42]
gi|228708942|gb|EEL61069.1| 50S ribosomal protein L4 [Bacillus cereus Rock4-18]
gi|228715235|gb|EEL67094.1| 50S ribosomal protein L4 [Bacillus cereus F65185]
gi|228727313|gb|EEL78507.1| 50S ribosomal protein L4 [Bacillus cereus AH676]
gi|228733347|gb|EEL84176.1| 50S ribosomal protein L4 [Bacillus cereus AH1271]
gi|228776356|gb|EEM24709.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228782840|gb|EEM31006.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|228789409|gb|EEM37329.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796469|gb|EEM43908.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228803117|gb|EEM49939.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228809010|gb|EEM55495.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228815750|gb|EEM61986.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822247|gb|EEM68229.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228828041|gb|EEM73769.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834286|gb|EEM79827.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228840586|gb|EEM85848.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846786|gb|EEM91791.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228853723|gb|EEM98483.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 200]
gi|228860764|gb|EEN05142.1| 50S ribosomal protein L4 [Bacillus thuringiensis IBL 4222]
gi|229267296|gb|ACQ48933.1| 50S ribosomal protein L4 [Bacillus anthracis str. A0248]
gi|296321997|gb|ADH04925.1| 50S ribosomal protein L4 [Bacillus thuringiensis BMB171]
gi|298723049|gb|EFI63947.1| 50S ribosomal protein L4 [Bacillus cereus SJ1]
gi|300374017|gb|ADK02921.1| 50S ribosomal protein L4 [Bacillus cereus biovar anthracis str. CI]
gi|324324102|gb|ADY19362.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|326937906|gb|AEA13802.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar chinensis
CT-43]
gi|358350732|dbj|BAL15904.1| ribosomal protein L4 [Bacillus cereus NC7401]
gi|363613386|gb|EHL64903.1| 50S ribosomal protein L4 [Bacillus sp. 7_6_55CFAA_CT2]
gi|364509940|gb|AEW53339.1| LSU ribosomal protein L4p (L1e) [Bacillus cereus F837/76]
gi|384383829|gb|AFH81490.1| 50S ribosomal protein L4 [Bacillus anthracis str. H9401]
gi|401072884|gb|EJP81338.1| 50S ribosomal protein L4 [Bacillus cereus VD022]
gi|401074464|gb|EJP82864.1| 50S ribosomal protein L4 [Bacillus cereus IS075]
gi|401088754|gb|EJP96936.1| 50S ribosomal protein L4 [Bacillus cereus AND1407]
gi|401094436|gb|EJQ02517.1| 50S ribosomal protein L4 [Bacillus cereus BAG3O-2]
gi|401112788|gb|EJQ20662.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X12-1]
gi|401120061|gb|EJQ27862.1| 50S ribosomal protein L4 [Bacillus cereus BAG3X2-2]
gi|401126755|gb|EJQ34489.1| 50S ribosomal protein L4 [Bacillus cereus BAG5O-1]
gi|401127139|gb|EJQ34868.1| 50S ribosomal protein L4 [Bacillus cereus BAG4O-1]
gi|401130794|gb|EJQ38450.1| 50S ribosomal protein L4 [Bacillus cereus BAG5X2-1]
gi|401166796|gb|EJQ74096.1| 50S ribosomal protein L4 [Bacillus cereus HuB4-10]
gi|401182162|gb|EJQ89301.1| 50S ribosomal protein L4 [Bacillus cereus ISP3191]
gi|401187763|gb|EJQ94835.1| 50S ribosomal protein L4 [Bacillus cereus HuB5-5]
gi|401193733|gb|EJR00736.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A1]
gi|401198824|gb|EJR05737.1| 50S ribosomal protein L4 [Bacillus cereus MSX-A12]
gi|401203617|gb|EJR10453.1| 50S ribosomal protein L4 [Bacillus cereus MSX-D12]
gi|401220239|gb|EJR26881.1| 50S ribosomal protein L4 [Bacillus cereus VD045]
gi|401221243|gb|EJR27867.1| 50S ribosomal protein L4 [Bacillus cereus VD014]
gi|401238747|gb|EJR45180.1| 50S ribosomal protein L4 [Bacillus cereus VD102]
gi|401248841|gb|EJR55162.1| 50S ribosomal protein L4 [Bacillus cereus VD115]
gi|401250142|gb|EJR56446.1| 50S ribosomal protein L4 [Bacillus cereus VD148]
gi|401262739|gb|EJR68877.1| 50S ribosomal protein L4 [Bacillus cereus VD154]
gi|401267765|gb|EJR73821.1| 50S ribosomal protein L4 [Bacillus cereus VD166]
gi|401271838|gb|EJR77841.1| 50S ribosomal protein L4 [Bacillus cereus VD156]
gi|401287875|gb|EJR93642.1| 50S ribosomal protein L4 [Bacillus cereus VD169]
gi|401303153|gb|EJS08716.1| 50S ribosomal protein L4 [Bacillus cereus VD200]
gi|401628468|gb|EJS46309.1| 50S ribosomal protein L4 [Bacillus cereus BAG1O-2]
gi|401628986|gb|EJS46814.1| 50S ribosomal protein L4 [Bacillus cereus BAG1X1-2]
gi|401645535|gb|EJS63190.1| 50S ribosomal protein L4 [Bacillus cereus BAG2X1-2]
gi|401791448|gb|AFQ17487.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-771]
gi|401795511|gb|AFQ09370.1| 50S ribosomal protein L4 [Bacillus cereus FRI-35]
gi|401819521|gb|EJT18698.1| 50S ribosomal protein L4 [Bacillus anthracis str. UR-1]
gi|401877313|gb|AFQ29480.1| 50S ribosomal protein L4 [Bacillus thuringiensis HD-789]
gi|402411835|gb|EJV44198.1| 50S ribosomal protein L4 [Bacillus cereus BAG6O-1]
gi|402421892|gb|EJV54136.1| 50S ribosomal protein L4 [Bacillus cereus BAG4X2-1]
gi|402423992|gb|EJV56188.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-1]
gi|402442650|gb|EJV74571.1| 50S ribosomal protein L4 [Bacillus cereus HD73]
gi|402455631|gb|EJV87412.1| 50S ribosomal protein L4 [Bacillus cereus HuB1-1]
gi|402459074|gb|EJV90812.1| 50S ribosomal protein L4 [Bacillus cereus HuB2-9]
gi|403392343|gb|EJY89597.1| 50S ribosomal protein L4 [Bacillus anthracis str. BF1]
gi|407385744|gb|AFU16245.1| 50S ribosomal protein L4 [Bacillus thuringiensis MC28]
gi|409171611|gb|AFV15916.1| 50S ribosomal protein L4 [Bacillus thuringiensis Bt407]
gi|449020535|gb|AGE75698.1| 50S ribosomal protein L4 [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|452101882|gb|AGF98821.1| LSU ribosomal protein L4p (L1e) [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 207
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+
Sbjct: 6 VYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T +
Sbjct: 126 LEDL--VLNAPKTKDMLAVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITADGV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + L++T + V+
Sbjct: 182 NVLDVLHHDKLIMTKAAVE 200
>gi|403669805|ref|ZP_10934981.1| 50S ribosomal protein L4 [Kurthia sp. JC8E]
Length = 207
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+LS TG +GE L+ + AV+ A++ + R+GT T R EV GGGRKP+
Sbjct: 6 VLSQTGSSVGEIELNDAIFGIEPNEAVLFDAIVAQRASLRQGTHKTKGRSEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG+VFGP PR ++ K+ KK +RLA+ +A+++ A N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLALKSALSTKVAETNFLV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ + PKTKEF++ + L + K+ + +V+ENV S+RNI + +LT +
Sbjct: 126 VDALT--LDAPKTKEFVKVLA--DLSVETKSLIVTADVNENVALSARNIPGVTVLTAEGI 181
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D++ A +V+T V
Sbjct: 182 NVLDLVSANKVVITKDAV 199
>gi|238018624|ref|ZP_04599050.1| hypothetical protein VEIDISOL_00459 [Veillonella dispar ATCC 17748]
gi|303230124|ref|ZP_07316893.1| 50S ribosomal protein L4 [Veillonella atypica ACS-134-V-Col7a]
gi|303231196|ref|ZP_07317934.1| 50S ribosomal protein L4 [Veillonella atypica ACS-049-V-Sch6]
gi|401680970|ref|ZP_10812879.1| 50S ribosomal protein L4 [Veillonella sp. ACP1]
gi|429760915|ref|ZP_19293363.1| 50S ribosomal protein L4 [Veillonella atypica KON]
gi|237865095|gb|EEP66385.1| hypothetical protein VEIDISOL_00459 [Veillonella dispar ATCC 17748]
gi|302514103|gb|EFL56107.1| 50S ribosomal protein L4 [Veillonella atypica ACS-049-V-Sch6]
gi|302515185|gb|EFL57158.1| 50S ribosomal protein L4 [Veillonella atypica ACS-134-V-Col7a]
gi|400218025|gb|EJO48911.1| 50S ribosomal protein L4 [Veillonella sp. ACP1]
gi|429176103|gb|EKY17504.1| 50S ribosomal protein L4 [Veillonella atypica KON]
Length = 207
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
+G K+GE L+ + AV+H+A++ + N+R GT +T TRG VRGGGRKP+ QK
Sbjct: 10 SGVKVGEIQLNDAVFGVEVNEAVMHQAVVRQLSNERLGTHATKTRGMVRGGGRKPWKQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR GS+R+P+ GGG FGP+PR + + +K +RLA+ +A++ V+EE
Sbjct: 70 TGRARSGSSRSPIWIGGGTTFGPQPRSYYKAMPRKARRLAVKSALSDKVNNSELYVLEEI 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
PKTKE + + + + + + E NVE+S+RNI +K L +N+FD
Sbjct: 130 T--LAAPKTKEVLNIINSFNVGDAK--VLFITEGDVNVERSARNIQGVKALACEGMNIFD 185
Query: 240 ILDAETLVLTPSTV 253
+L + L +T V
Sbjct: 186 LLHYDKLFITKGAV 199
>gi|423480255|ref|ZP_17456945.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-2]
gi|401149260|gb|EJQ56735.1| 50S ribosomal protein L4 [Bacillus cereus BAG6X1-2]
Length = 207
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + TG ++GE L + AV+ A++ + R+GT TR EVRGGGRK
Sbjct: 4 VTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E+ PKTK+ + ++ GL ++KA + + +E+VE S+RNI + ++T
Sbjct: 124 VVLEDL--VLNAPKTKDMVTVLK--GLTVEKKALIVTADANESVELSARNIPGVTVITAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D+L + L++T + V
Sbjct: 180 GVNVLDVLHHDKLIMTKAAV 199
>gi|342215804|ref|ZP_08708451.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586694|gb|EGS30094.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 206
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G+ I E L + V+ + + N+R+GT S TR EVRGGGRK
Sbjct: 4 IQMLNMEGKSIQEVELKKDIFDVEVNEHAVYLVVKNILANRRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KK KRLA+ + + S
Sbjct: 64 PWRQKGTGRARQGSIRSPQWKGGGVVFAPKPRDYSYTTPKKVKRLALRSVLTSKVQENEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I+V+ K E KTK +A++ L+ +K+ LV E +E+V ++++NI +K+L +
Sbjct: 124 ILVDAL--KLEEAKTKAMAQALK--ALNAAKKSLILVGEGNESVARAAKNIAGVKVLNIQ 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
++N++D+L ++L+L ++ + Y
Sbjct: 180 SINVYDLLKYDSLILDQEALNKIQEVY 206
>gi|269798549|ref|YP_003312449.1| 50S ribosomal protein L4 [Veillonella parvula DSM 2008]
gi|282849865|ref|ZP_06259248.1| ribosomal protein L4/L1 family protein [Veillonella parvula ATCC
17745]
gi|294792795|ref|ZP_06757942.1| ribosomal protein L4/L1 family protein [Veillonella sp. 6_1_27]
gi|294794549|ref|ZP_06759685.1| ribosomal protein L4/L1 family protein [Veillonella sp. 3_1_44]
gi|313892995|ref|ZP_07826572.1| 50S ribosomal protein L4 [Veillonella sp. oral taxon 158 str.
F0412]
gi|417000169|ref|ZP_11940490.1| 50S ribosomal protein L4 [Veillonella parvula ACS-068-V-Sch12]
gi|269095178|gb|ACZ25169.1| ribosomal protein L4/L1e [Veillonella parvula DSM 2008]
gi|282580302|gb|EFB85702.1| ribosomal protein L4/L1 family protein [Veillonella parvula ATCC
17745]
gi|294454879|gb|EFG23252.1| ribosomal protein L4/L1 family protein [Veillonella sp. 3_1_44]
gi|294456694|gb|EFG25057.1| ribosomal protein L4/L1 family protein [Veillonella sp. 6_1_27]
gi|313442348|gb|EFR60763.1| 50S ribosomal protein L4 [Veillonella sp. oral taxon 158 str.
F0412]
gi|333976250|gb|EGL77120.1| 50S ribosomal protein L4 [Veillonella parvula ACS-068-V-Sch12]
Length = 207
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
+G K+GE L+ + AV+H+A++ + N+R GT +T TRG VRGGGRKP+ QK
Sbjct: 10 SGVKVGEIQLNDAVFGVEVNEAVMHQAVVRQLSNERLGTHATKTRGMVRGGGRKPWKQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR GS+R+P+ GGG FGP+PR + + +K +RLA+ +A++ V+EE
Sbjct: 70 TGRARAGSSRSPIWIGGGTTFGPQPRSYYKAMPRKARRLAVKSALSDKVNNSELYVLEEI 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
PKTKE + + + + + + E NVE+S+RNI +K L +N+FD
Sbjct: 130 T--LAAPKTKEVLNIINSFNVGDAK--VLFITEGDVNVERSARNIQGVKALACEGMNIFD 185
Query: 240 ILDAETLVLTPSTV 253
+L + L +T V
Sbjct: 186 LLHYDKLFITKGAV 199
>gi|50364939|ref|YP_053364.1| 50S ribosomal protein L4 [Mesoplasma florum L1]
gi|81612930|sp|Q6F1Z3.1|RL4_MESFL RecName: Full=50S ribosomal protein L4
gi|50363495|gb|AAT75480.1| 50S ribosomal protein L4 [Mesoplasma florum L1]
Length = 208
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 8/211 (3%)
Query: 54 LPILSFTGEKIGETYLD--LKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
L +L+ G+++ L+ + + AP + ++ +I+ R+GT T TR EVRGGG
Sbjct: 3 LKVLNVQGQEVKTISLNDSVWNVAPH--KQAIYDTVISQQAALRQGTKKTKTRAEVRGGG 60
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAA 170
+KP+ QK TGRAR+GS R P GGGV FGP P ++ +NKK + LA +A++ A+
Sbjct: 61 KKPWRQKGTGRARQGSIRAPHWRGGGVTFGPTPDINYKKSVNKKVRALAFKSALSIKASE 120
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
+N ++V++FD F +P TKE I M+ +D QK + E E V KSS NI +K L
Sbjct: 121 QNLVIVDKFD--FAKPSTKEMISVMKNLQIDD-QKTLIITKENEELVIKSSSNIKGVKTL 177
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN+FDIL+A LV+T + G Y
Sbjct: 178 PSIKLNVFDILNATKLVMTEEAAMAVEGVYA 208
>gi|228989320|ref|ZP_04149311.1| 50S ribosomal protein L4 [Bacillus pseudomycoides DSM 12442]
gi|228995502|ref|ZP_04155170.1| 50S ribosomal protein L4 [Bacillus mycoides Rock3-17]
gi|229003127|ref|ZP_04160973.1| 50S ribosomal protein L4 [Bacillus mycoides Rock1-4]
gi|228758090|gb|EEM07289.1| 50S ribosomal protein L4 [Bacillus mycoides Rock1-4]
gi|228764231|gb|EEM13110.1| 50S ribosomal protein L4 [Bacillus mycoides Rock3-17]
gi|228770398|gb|EEM18971.1| 50S ribosomal protein L4 [Bacillus pseudomycoides DSM 12442]
Length = 207
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + TG ++GE L + AV+ A++ + R+GT TR EVRGGGRKP+
Sbjct: 6 VYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ PKTK+ + ++ GL ++KA + + +E VE S+RNI + ++T +
Sbjct: 126 LEDL--VLNAPKTKDMVAVLK--GLTVEKKALIVTADANEAVELSARNIPGVTVITADGV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + L++T + V+
Sbjct: 182 NVLDVLHHDKLIMTKAAVE 200
>gi|19704965|ref|NP_602460.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296329219|ref|ZP_06871720.1| ribosomal protein L4/L1 family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|46577280|sp|Q8RIF6.1|RL4_FUSNN RecName: Full=50S ribosomal protein L4
gi|19712867|gb|AAL93759.1| LSU ribosomal protein L1E [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296153575|gb|EFG94392.1| ribosomal protein L4/L1 family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 209
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + GE+ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|187934984|ref|YP_001884474.1| 50S ribosomal protein L4 [Clostridium botulinum B str. Eklund 17B]
gi|188589298|ref|YP_001919673.1| 50S ribosomal protein L4 [Clostridium botulinum E3 str. Alaska E43]
gi|251779469|ref|ZP_04822389.1| 50S ribosomal protein L4 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226730642|sp|B2UYB1.1|RL4_CLOBA RecName: Full=50S ribosomal protein L4
gi|226730643|sp|B2TIH6.1|RL4_CLOBB RecName: Full=50S ribosomal protein L4
gi|187723137|gb|ACD24358.1| 50S ribosomal protein L4 [Clostridium botulinum B str. Eklund 17B]
gi|188499579|gb|ACD52715.1| 50S ribosomal protein L4 [Clostridium botulinum E3 str. Alaska E43]
gi|243083784|gb|EES49674.1| 50S ribosomal protein L4 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 206
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G+ L+ + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GKQVGDIQLNANVFEVEVNKHALHQVVVALLANKRQGTQSAKTRTEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF PKPRD+ + I K +R+A+ +A+ S +V+E
Sbjct: 71 GRARQGSIRAPQWIKGGIVFAPKPRDYRVSIPKSMRRVAMKSALTSKVNDGQMVVLESLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK+FIE + + +K + E +E V KS+RNI + ++ +N++D+
Sbjct: 131 --FEAPKTKQFIEMLSAFN---AKKTLIITAESNEAVYKSARNIQGVSVIPVNNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKFEKLIITKDAVSKIEEVYA 206
>gi|323490624|ref|ZP_08095829.1| 50S ribosomal protein L4 [Planococcus donghaensis MPA1U2]
gi|323395716|gb|EGA88557.1| 50S ribosomal protein L4 [Planococcus donghaensis MPA1U2]
gi|456013273|gb|EMF46932.1| LSU ribosomal protein L4p (L1e) [Planococcus halocryophilus Or1]
Length = 207
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 123/203 (60%), Gaps = 4/203 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ TG ++GE L+ +V+ A+++ + R+G R EV GGG
Sbjct: 2 TKVALLNQTGSQVGEIELNDHVFGIQPNESVLFDAVVSQRASLRQGNHKVKNRSEVAGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLA+ +A++SA E
Sbjct: 62 KKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLALRSALSSAVVGE 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N +V+E F+ PKTK F + + L +KA F+ ++ ENV KS+RN+ + ++
Sbjct: 122 NLMVLEGLT--FDAPKTKSFNQLIAD--LSIGKKALFVTADLDENVAKSARNLKGMTVVA 177
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
+N+ D+L + +V+T + V+
Sbjct: 178 ADGINVLDLLGHDKIVMTKAAVE 200
>gi|150015044|ref|YP_001307298.1| 50S ribosomal protein L4 [Clostridium beijerinckii NCIMB 8052]
gi|189029495|sp|A6LPR2.1|RL4_CLOB8 RecName: Full=50S ribosomal protein L4
gi|149901509|gb|ABR32342.1| ribosomal protein L4/L1e [Clostridium beijerinckii NCIMB 8052]
Length = 206
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K+ + L+ A + +H+ ++ + NKR+GT ST TR EVRGGG KP+ QK T
Sbjct: 11 GNKVADMELNENVFAAEINEYALHQVVVALLANKRQGTQSTKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GG+VF PKPRD+ + + K +++A+ +A+ S IV++ +
Sbjct: 71 GRARQGSIRSPQWIKGGIVFAPKPRDYRVSVPKSMRKVAMKSALTSKVQDNQMIVLDSLN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK IE ++ L+ KA + E +E V KS+RNI + ++ +N++D+
Sbjct: 131 --FEAPKTKSMIEMLK--ALEA-NKALIITAESNEVVYKSARNIQGISVIPANNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKYEKLIITKDAVSKIEEVYA 206
>gi|229829428|ref|ZP_04455497.1| hypothetical protein GCWU000342_01518 [Shuttleworthia satelles DSM
14600]
gi|229791859|gb|EEP27973.1| hypothetical protein GCWU000342_01518 [Shuttleworthia satelles DSM
14600]
Length = 206
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VH A++ + NKR+GT TR EVRGGGRKP+ QK TG AR+GS R+P GG VVF
Sbjct: 32 LVHMAVLQQLANKRQGTQKAKTRSEVRGGGRKPWRQKGTGHARQGSTRSPQWTGGVVVFA 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PRD+S K+N+KEKR A+ +A++S IVV++ F+ KTK+F E ++ ++
Sbjct: 92 PTPRDYSFKLNRKEKRAALLSALSSRVQENKLIVVDQL--AFDEIKTKKFAEVLKNLKVE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
KA ++ + E S+RNI +K ++N++DIL TLV+T V + Y
Sbjct: 150 ---KALVVLGQDDEKAIISARNIPDVKTAQTNSINVYDILKYNTLVVTKEAVKSIEEVYA 206
>gi|422933529|ref|ZP_16966449.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339891570|gb|EGQ80531.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 209
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + GE+ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN- 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
I+V ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 123 ILVLDYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|132978|sp|P28601.1|RL4_BACST RecName: Full=50S ribosomal protein L4; Short=BL4
gi|40103|emb|CAA47403.1| ribosomal protein L4 [Geobacillus stearothermophilus]
Length = 207
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G+ +GE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGQTVGEIELNDAVFGIEPNKHVLFEAVIMQRASMRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S + +V+++
Sbjct: 70 TGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENDIVVLDQL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTKE ++ + +D +KA + E++ENV S+RNI +K++ +N+ D
Sbjct: 130 S--LEAPKTKEMVKILNNLSVD--RKALIVTDELNENVYLSARNIPGVKVVPANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|169830029|ref|YP_001700187.1| 50S ribosomal protein L4 [Lysinibacillus sphaericus C3-41]
gi|226730684|sp|B1HMX9.1|RL4_LYSSC RecName: Full=50S ribosomal protein L4
gi|168994517|gb|ACA42057.1| 50S ribosomal protein L4 [Lysinibacillus sphaericus C3-41]
Length = 207
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +LS TG +GE L+ + AV+ A++ + R+G R EV GGG
Sbjct: 2 TKVSVLSQTGASVGEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSEVAGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLA+ +A+++ +
Sbjct: 62 RKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLALKSALSAKVVEQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N +V++ PKTKEF + ++ L+ +K+ F+ ++ ENV S+RNI + +LT
Sbjct: 122 NFLVLDALT--LAAPKTKEFTKILKDLSLE--KKSLFVTADLDENVALSARNIPGVTVLT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
+N+ D+L E +V T S V+
Sbjct: 178 ANGINVLDLLGHEKVVFTKSAVE 200
>gi|374298075|ref|YP_005048266.1| 50S ribosomal protein L4 [Clostridium clariflavum DSM 19732]
gi|359827569|gb|AEV70342.1| LSU ribosomal protein L4P [Clostridium clariflavum DSM 19732]
Length = 207
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + +G+ +G+ L + + + VVH+ ++ + NKR+GT ST T+ EVRGGG K
Sbjct: 4 VDLYDMSGKVVGDINLSDEVFGVEVNKEVVHQVVVNQLANKRQGTQSTKTKSEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+ GG+V GPKPR + + KK +RLA+ + ++S
Sbjct: 64 PWRQKGTGRARHGSIRSAQWVKGGIVLGPKPRSYRYTLPKKVRRLALKSVLSSKVNENEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ F+ KTK+ +E ++ +D A L+ E E +EKS+RNI +K L
Sbjct: 124 IVLDKLS--FDAIKTKQMVEVLKNLKVDG--TAVLLIAEKDEKIEKSARNIPGVKTLLAN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++D++ L++T V
Sbjct: 180 TINVYDLVKHNKLIITKDAV 199
>gi|387928109|ref|ZP_10130787.1| 50S ribosomal protein L4 [Bacillus methanolicus PB1]
gi|387587695|gb|EIJ80017.1| 50S ribosomal protein L4 [Bacillus methanolicus PB1]
Length = 207
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++GE L+ + + V+ A++ + R+GT T R EV GGGRK
Sbjct: 4 VALFNQNGSQVGEIELNDAVFGIEPNKHVLFEAVVMQRASLRQGTHKTKIRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E FE PKTK+F ++ L KA + ++ ENV S+RNI + ++
Sbjct: 124 LVLENL--AFETPKTKDFKGVLK--NLSVNTKALVVTADLDENVALSARNIPGVTVVAAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L+ + L+LT + V+
Sbjct: 180 GINVLDVLNHDKLILTKAAVE 200
>gi|237743900|ref|ZP_04574381.1| LSU ribosomal protein L1E [Fusobacterium sp. 7_1]
gi|260495202|ref|ZP_05815330.1| ribosomal protein L4/L1 [Fusobacterium sp. 3_1_33]
gi|289765451|ref|ZP_06524829.1| LSU ribosomal protein L1E [Fusobacterium sp. D11]
gi|336400121|ref|ZP_08580909.1| 50S ribosomal protein L4 [Fusobacterium sp. 21_1A]
gi|423138098|ref|ZP_17125741.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229432931|gb|EEO43143.1| LSU ribosomal protein L1E [Fusobacterium sp. 7_1]
gi|260197259|gb|EEW94778.1| ribosomal protein L4/L1 [Fusobacterium sp. 3_1_33]
gi|289717006|gb|EFD81018.1| LSU ribosomal protein L1E [Fusobacterium sp. D11]
gi|336163318|gb|EGN66250.1| 50S ribosomal protein L4 [Fusobacterium sp. 21_1A]
gi|371958660|gb|EHO76369.1| 50S ribosomal protein L4 [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 209
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + GE+ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN- 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
I+V ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 123 ILVLDYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|217077284|ref|YP_002335002.1| 50S ribosomal protein L4 [Thermosipho africanus TCF52B]
gi|419759859|ref|ZP_14286144.1| 50S ribosomal protein L4 [Thermosipho africanus H17ap60334]
gi|226731434|sp|B7IHU7.1|RL4_THEAB RecName: Full=50S ribosomal protein L4
gi|217037139|gb|ACJ75661.1| ribosomal protein L4/L1 family [Thermosipho africanus TCF52B]
gi|407514898|gb|EKF49684.1| 50S ribosomal protein L4 [Thermosipho africanus H17ap60334]
Length = 221
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 121/205 (59%), Gaps = 14/205 (6%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
GE IG L + A + V+ R + + N R GTAST TRGEV GGGRKP+ QK T
Sbjct: 11 GENIGPIDLKDEVFAIEPNFDVIWRYVDMQLTNARAGTASTKTRGEVSGGGRKPWIQKHT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGV GPKPR + ++NKK KRLA+ +A++ N IVV+E
Sbjct: 71 GRARQGSIRAPHWRHGGVAHGPKPRVYFKRLNKKMKRLALKSALSLRLKEGNLIVVDEI- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKML------TP 232
KF+RPKTK+ E ++ GL+ ++ L +V E NV+ S RNI +K++
Sbjct: 130 -KFKRPKTKDLREVLKNLGLENQKVLVVLPKKVEEYVNVKISGRNIPGVKVIIADNPGVD 188
Query: 233 RT----LNLFDILDAETLVLTPSTV 253
RT LN++DIL+ + LVL TV
Sbjct: 189 RTNIDGLNVYDILNHDKLVLLQGTV 213
>gi|402310756|ref|ZP_10829717.1| 50S ribosomal protein L4 [Eubacterium sp. AS15]
gi|400366985|gb|EJP20004.1| 50S ribosomal protein L4 [Eubacterium sp. AS15]
Length = 208
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 109/200 (54%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G+ + + + A V+ A+ + NKR+GT ST TR EVRGGGRK
Sbjct: 4 IDVLDINGKVVEQMEISEALFAAKVNEHCVYEAVKNHLANKRQGTQSTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KINKK KR+A+ + +
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYKINKKIKRIALKSVLTDKVQNNKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+ E KTK F + M+ L K F+ E V +S RNI + +
Sbjct: 124 VVLNEL--VISDAKTKAFAQVMKNLQLSG-VKTLFVTKENDPEVVRSGRNIKGVDITFAN 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N +DI++ E LV+T V
Sbjct: 181 LINTYDIINHEVLVMTKDAV 200
>gi|167767802|ref|ZP_02439855.1| hypothetical protein CLOSS21_02337 [Clostridium sp. SS2/1]
gi|317497094|ref|ZP_07955421.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|429762505|ref|ZP_19294894.1| 50S ribosomal protein L4 [Anaerostipes hadrus DSM 3319]
gi|167710541|gb|EDS21120.1| 50S ribosomal protein L4 [Clostridium sp. SS2/1]
gi|291558861|emb|CBL37661.1| LSU ribosomal protein L4P [butyrate-producing bacterium SSC/2]
gi|316895639|gb|EFV17794.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|429181495|gb|EKY22654.1| 50S ribosomal protein L4 [Anaerostipes hadrus DSM 3319]
Length = 206
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 127/204 (62%), Gaps = 9/204 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ G+++ + L+ + +VH A+++ + N R+GT TR EVRGGG
Sbjct: 2 ATVSVLNMEGKEVEKLELNDNIFGVEINEHLVHLAVVSQLANNRQGTQKAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PR+++ K+NKKE+R+A+ +A+ S A+
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWKGGGVVFAPTPREYTKKLNKKERRIALKSALTSRVQAD 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDP--KQKATFLVMEVSENVEKSSRNIGTLKM 229
+V++EF KF+ KTK ++AM LD +KA ++ ++N+ S+RN+ +K
Sbjct: 122 KFVVIDEF--KFDEIKTKN-VKAM----LDSVGAKKALVVMGSKNDNLVLSARNLPGVKT 174
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
T+N++DIL +T+V++ V
Sbjct: 175 ALTSTINVYDILKYDTVVVSKEAV 198
>gi|258646052|ref|ZP_05733521.1| ribosomal protein L4/L1 family protein [Dialister invisus DSM
15470]
gi|260403422|gb|EEW96969.1| ribosomal protein L4/L1 family protein [Dialister invisus DSM
15470]
Length = 208
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G GE L+ + AV+H+A++ M N+R GT +T TRG VRGGGRK
Sbjct: 4 VTLYNTAGAAAGEIELNDSVFGVEYNEAVIHQAVVRQMANERLGTHATKTRGLVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + +K ++LA+ +A++ A
Sbjct: 64 PWKQKGTGRARVGSIRSPLWVGGGTVFGPTPRSHAKDMTRKARQLAVKSALSEKLRANEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME---VSENVEKSSRNIGTLKML 230
IVV+ + F+ PKTKE ++ + + +D K L+++ SEN S+RNI +K
Sbjct: 124 IVVDAIN--FDTPKTKEVVKFLAAFNVDGKA----LIVDGGTASENTVLSARNIPGVKAY 177
Query: 231 TPRTLNLFDILDAETLVLTPSTV 253
P LN++DI+ L LT V
Sbjct: 178 APSGLNIYDIVHYTKLFLTQDAV 200
>gi|210611126|ref|ZP_03288740.1| hypothetical protein CLONEX_00930 [Clostridium nexile DSM 1787]
gi|210152113|gb|EEA83120.1| hypothetical protein CLONEX_00930 [Clostridium nexile DSM 1787]
Length = 206
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++G L+ + ++H A++ + NKR+GT TR EV GGG
Sbjct: 2 ANVSVYNIEGKEVGTIDLNDAVFGVEVNEHLLHMAVVNQLANKRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR A+ +A+ +
Sbjct: 62 RKPWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTTRVLEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV++E + F KTK F + + KA ++ + + N S+RNI +K
Sbjct: 122 KFIVLDEMN--FGEIKTKNFQNMLNNLEVS---KALVVLEDGNTNAALSARNIANVKTAW 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T+++T + V
Sbjct: 177 TNTINVYDILKYNTVIVTKAVV 198
>gi|342214833|ref|ZP_08707504.1| 50S ribosomal protein L4 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590364|gb|EGS33607.1| 50S ribosomal protein L4 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 207
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ +G K+GE L+ + AV+H+A++ + N+R GT +T TRGEVRGGG+KP+ Q
Sbjct: 8 NMSGAKVGEIQLNDAVFGVEVNAAVMHQAVVRQLSNERLGTHATKTRGEVRGGGKKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS+R+P+ GGG+ FGP+PR + + +K +RLA+ +A++ V++
Sbjct: 68 KGTGRARAGSSRSPIWVGGGITFGPQPRSYYKAMPRKARRLAVKSALSDKVNNSELFVID 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
E K PKTKE + + + + + + + NVE S+RNI +K L +N+
Sbjct: 128 EL--KLAAPKTKEVLNILNNFQVGDAK--VLFITDGDVNVELSARNIQGVKALPYTNINI 183
Query: 238 FDILDAETLVLTPSTV 253
FD+L + L + +
Sbjct: 184 FDLLHHDKLFIAEGAI 199
>gi|410727963|ref|ZP_11366156.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
Maddingley MBC34-26]
gi|410597523|gb|EKQ52134.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
Maddingley MBC34-26]
Length = 206
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K+ + L+ A + +H+ ++ + NKR+GT ST TR EVRGGG KP+ QK T
Sbjct: 11 GNKVADMELNESVFAAEINEYALHQVVVALLANKRQGTQSTKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GG+VF PKPRD+ + + K +++A+ +A+ S IV++ +
Sbjct: 71 GRARQGSIRSPQWIKGGIVFAPKPRDYRVSVPKSMRKVAMKSALTSKVQDNQMIVLDSLN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK +E ++ L+ KA + E +E V KS+RNI + ++ +N++D+
Sbjct: 131 --FEAPKTKNIVEMLK--ALEA-NKALIITAESNEVVYKSARNIQGISVIPANNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKYEKLIITKDAVSKIEEVYA 206
>gi|227485524|ref|ZP_03915840.1| ribosomal protein L4 [Anaerococcus lactolyticus ATCC 51172]
gi|227236523|gb|EEI86538.1| ribosomal protein L4 [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL+ GE +GE L+ A + V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VNILNIKGENVGELELNETIFATKVSEHAVYEVIKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVF PKPRD+S ++ KK +R A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGVVFAPKPRDYSYRLAKKLRRKALYSVLTSKLNDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ E KTKE A+ L+ +KA + E E V +S RNI +++ R
Sbjct: 124 IVVDSL--ALENAKTKEAKAAL--VALNADRKAYVVTAEKDELVYRSFRNIEGVEVAEAR 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D++ + LV+T +
Sbjct: 180 LINVYDLVRHDKLVITKDAI 199
>gi|295702351|ref|YP_003595426.1| 50S ribosomal protein L4 [Bacillus megaterium DSM 319]
gi|384049268|ref|YP_005497285.1| 50S ribosomal protein L4 [Bacillus megaterium WSH-002]
gi|294800010|gb|ADF37076.1| 50S ribosomal protein L4 [Bacillus megaterium DSM 319]
gi|345446959|gb|AEN91976.1| 50S ribosomal protein L4 [Bacillus megaterium WSH-002]
Length = 207
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE +GE L + V+ A++ ++R+GT+ R EVRGGGRK
Sbjct: 4 VALFNQNGENVGEIELQDAVFGIEPNNKVLFDAIVMQRASQRQGTSKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A+++ A +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPVPRSYSYKLPKKVRRLAIKSALSTKAQDNSI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTKE + ++ L ++KA + +++ENV S+RNI + ++
Sbjct: 124 VVLEALS--FDAPKTKEMVAVLK--NLTVERKALVVTADLNENVALSARNIPGVTVVAAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
L++ D+++ + LV+T V+
Sbjct: 180 GLSVLDVMNHDKLVITKDAVE 200
>gi|116493162|ref|YP_804897.1| 50S ribosomal protein L4P [Pediococcus pentosaceus ATCC 25745]
gi|421894155|ref|ZP_16324646.1| 50S ribosomal protein L4 [Pediococcus pentosaceus IE-3]
gi|122265374|sp|Q03EB7.1|RL4_PEDPA RecName: Full=50S ribosomal protein L4
gi|116103312|gb|ABJ68455.1| LSU ribosomal protein L4P [Pediococcus pentosaceus ATCC 25745]
gi|385272983|emb|CCG90018.1| 50S ribosomal protein L4 [Pediococcus pentosaceus IE-3]
Length = 207
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 118/189 (62%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K G+ L+ + VV A++ + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GTKNGDVELNADIFGIEPNNDVVFEAVVMQRASMRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR ++ I KK +RLA+ + ++ E+ +VV+EF
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYAYSIPKKMRRLALKSVLSQKVLDESLVVVDEF- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
KFE PKTK+F +++ +D +KA ++ E +E+ ++RN+ +K++ P +N+ DI
Sbjct: 130 -KFETPKTKDFAQSLGNLNVD--KKALLVLEEDNESAVLAARNLSNVKIVEPEGINVLDI 186
Query: 241 LDAETLVLT 249
++++ LV+T
Sbjct: 187 MNSDKLVIT 195
>gi|257125037|ref|YP_003163151.1| 50S ribosomal protein L4 [Leptotrichia buccalis C-1013-b]
gi|257048976|gb|ACV38160.1| ribosomal protein L4/L1e [Leptotrichia buccalis C-1013-b]
Length = 214
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 9/202 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I G + G ++ + + V+H L+ ++ R+G+AST TR EVRGGGRK
Sbjct: 4 LNIYKLDGSQAGTIEVNNDVFGIEPNKHVMHEVLVAELAEARQGSASTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GPKPR+++ K+NKK ++LA+ +A+A+ + N
Sbjct: 64 PFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRNYAKKVNKKVRKLALKSALATKISEGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK------SSRNIGTL 227
IV+++F E PKTK FI+ + D K ++ + ++N+++ S+RNI +
Sbjct: 124 IVLDDF--ALEIPKTKTFIDFAKALNFDG-AKQLYVTNDDTDNIDRDYFLYLSTRNIEKV 180
Query: 228 KMLTPRTLNLFDILDAETLVLT 249
+ R L+++ ++ + ++LT
Sbjct: 181 AAINTRDLSIYWLIKQDKVILT 202
>gi|359410071|ref|ZP_09202536.1| ribosomal protein L4/L1e [Clostridium sp. DL-VIII]
gi|357168955|gb|EHI97129.1| ribosomal protein L4/L1e [Clostridium sp. DL-VIII]
Length = 206
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+ + L+ A + +H+ ++ + NKR+GT ST TR EVRGGG KP+ QK T
Sbjct: 11 GKKVADMELNESVFAAEVNEYALHQVVVALLANKRQGTQSTKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF PKPRD+ + + K +++A+ +A+ S IV++ +
Sbjct: 71 GRARQGSIRAPQWIKGGIVFAPKPRDYRVSVPKSMRKVAMKSALTSKVQDNQMIVLDSLN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK +E ++ L+ KA + E +E V KS+RNI + ++ +N++D+
Sbjct: 131 --FEAPKTKNVVEMLK--ALEA-NKALIITAESNEVVYKSARNIQGISIIPANNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKYEKLIITKDAVSKIEEVYA 206
>gi|169335630|ref|ZP_02862823.1| hypothetical protein ANASTE_02050 [Anaerofustis stercorihominis DSM
17244]
gi|169258368|gb|EDS72334.1| 50S ribosomal protein L4 [Anaerofustis stercorihominis DSM 17244]
Length = 205
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 112/194 (57%), Gaps = 5/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L+ GE + L+ + VVH+ + + N+R+GT S TR EVRGGG+KP+
Sbjct: 5 VLNVKGEVVESVSLNNDIFKIEPNMPVVHQYVKAYLANQRQGTQSAKTRAEVRGGGKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R P+ GGGV F PKPRD+S INKK KRLA+ + ++ + +
Sbjct: 65 RQKGTGRARVGSSRNPVWTGGGVAFAPKPRDYSQSINKKMKRLAMKSVFSAKVNDKELFI 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++E KF+ PKTK +E ++ K ++ E +NV S RNI K T TL
Sbjct: 125 LDEL--KFDAPKTKAMVEVFDNLKIN---KTLVVIAENDKNVVNSVRNIKDAKCATVGTL 179
Query: 236 NLFDILDAETLVLT 249
N++++L L+LT
Sbjct: 180 NVYEMLKYNNLILT 193
>gi|81642546|sp|Q6AP70.1|RL4_DESPS RecName: Full=50S ribosomal protein L4
gi|50876014|emb|CAG35854.1| probable 50S ribosomal protein L4 [Desulfotalea psychrophila LSv54]
Length = 211
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 5/214 (2%)
Query: 49 QLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVR 108
++ S + +++ EK+ E L+ + ++H + KR GTAST TR EVR
Sbjct: 3 RIMSTVSVVNTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVR 62
Query: 109 GGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAA 168
GGG KP+ QK TGRAR GS +PL GGGV FGPKPRD+S K+N+K ++ A+S A+++
Sbjct: 63 GGGAKPWRQKGTGRARAGSRTSPLWRGGGVTFGPKPRDYSFKLNRKVRQQAVSMALSARF 122
Query: 169 AAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLK 228
N IV++ F + KTKEF M+ L A ++ + SEN+ KS RN+ +
Sbjct: 123 QEGNLIVLDNF--IMDAIKTKEFASTMKTLEL---ANALIVMDDASENLSKSCRNVHGYR 177
Query: 229 MLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
+L LN++DIL + +VL ++ L R V
Sbjct: 178 ILPAEGLNVYDILLHKKVVLVKPVIESLEKRLMV 211
>gi|397905104|ref|ZP_10505976.1| LSU ribosomal protein L4p (L1e) [Caloramator australicus RC3]
gi|397161899|emb|CCJ33310.1| LSU ribosomal protein L4p (L1e) [Caloramator australicus RC3]
Length = 206
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 117/207 (56%), Gaps = 7/207 (3%)
Query: 56 ILSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKP 114
+ + EK+GE L D AP A+ H+ ++ + N+R+GT S LTR EV GGG+KP
Sbjct: 6 LFNMNAEKVGEIELSDAVFGAPINKEAM-HQVVVNILANRRQGTQSALTRAEVSGGGKKP 64
Query: 115 YSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI 174
+ QK TGRAR GS R+P GG+VF PKPRD+S + KK KR+A+ +A++S A I
Sbjct: 65 WRQKGTGRARHGSIRSPQWRHGGIVFAPKPRDYSYTLPKKLKRVALKSALSSKVAENQII 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+++ + PKTK E ++++ + K +V E E + KS RNI ++
Sbjct: 125 VLDKLT--LDAPKTKTIAEMLKKFNAN---KTLIVVKESDEVIYKSVRNIENAHVIPVNN 179
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DIL + ++T + Y
Sbjct: 180 LNVYDILKYDKFIVTQDAARLIEEVYA 206
>gi|94987403|ref|YP_595336.1| 50S ribosomal protein L4 [Lawsonia intracellularis PHE/MN1-00]
gi|442556248|ref|YP_007366073.1| 50S ribosomal protein L4 [Lawsonia intracellularis N343]
gi|166234679|sp|Q1MPR2.1|RL4_LAWIP RecName: Full=50S ribosomal protein L4
gi|94731652|emb|CAJ55015.1| ribosomal protein L4 [Lawsonia intracellularis PHE/MN1-00]
gi|441493695|gb|AGC50389.1| 50S ribosomal protein L4 [Lawsonia intracellularis N343]
Length = 206
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + KR GT S TRG V GGG KP+ QK TGRAR GSNR+PL GGG+VFG
Sbjct: 32 ILHLVVRAQLAAKRAGTHSVKTRGHVSGGGAKPWRQKGTGRARAGSNRSPLWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+S K+NKK + LA+ A++S A EN IV++ KTK F+ GL
Sbjct: 92 PQPRDYSFKVNKKIRSLALCMALSSRFAEENLIVIDNIV--LPEIKTKHFVGVANILGL- 148
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
KA + S + S RN+ +K+LT LN++DIL + LVL V + R
Sbjct: 149 --HKALIVAPVESTQLLLSMRNVPNVKLLTYDRLNVYDILKYKQLVLLEGAVQHIEAR 204
>gi|315925255|ref|ZP_07921469.1| 50S ribosomal protein L4 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621489|gb|EFV01456.1| 50S ribosomal protein L4 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 206
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 5/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL G + L + + VVH+ ++ + NKR+GT T TR EVRGGGRK
Sbjct: 4 IDILDMKGNVVDSAELSDRVFGIEPNEPVVHQVVVAQLANKRQGTKGTKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS+R+PL GGGV+F PK RD+S K+NKK + LA+ + ++ A +
Sbjct: 64 PWRQKGTGRARAGSSRSPLWIGGGVIFAPKARDFSKKVNKKVRNLAMRSVFSAKFADKEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
VV+ + F+ PKTK+ I A+ +D KA + E +NV S+RNI + T
Sbjct: 124 RVVDALN--FDAPKTKDMIAALA--AIDA-GKALVVTPEKVDNVYLSARNIPKTRATTVA 178
Query: 234 TLNLFDILDAETLVLT 249
LN++D+L + LVLT
Sbjct: 179 ELNVYDMLKYDVLVLT 194
>gi|242278659|ref|YP_002990788.1| 50S ribosomal protein L4 [Desulfovibrio salexigens DSM 2638]
gi|259491552|sp|C6C186.1|RL4_DESAD RecName: Full=50S ribosomal protein L4
gi|242121553|gb|ACS79249.1| ribosomal protein L4/L1e [Desulfovibrio salexigens DSM 2638]
Length = 206
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + + KR+GT +T TRG RGGG KP+ QK TGRAR GS R+PL GGG FG
Sbjct: 32 ILHLVVRSQLAAKRQGTHATKTRGMKRGGGAKPWRQKGTGRARAGSTRSPLWRGGGTTFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+S K+NKK +RLA+ A+ S + E +VV+ D KTK F+E GL+
Sbjct: 92 PQPRDYSFKVNKKVRRLALKMALTSRLSEEKMMVVKNID--LPEIKTKLFVEVAEALGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
KA +V + + S+RNI +K++T LN++DIL A LV+ + L R
Sbjct: 150 ---KALVVVKDADNKLLLSARNIPGIKLITADQLNVYDILKARQLVMLENAAQDLQER 204
>gi|153816251|ref|ZP_01968919.1| hypothetical protein RUMTOR_02500 [Ruminococcus torques ATCC 27756]
gi|145846434|gb|EDK23352.1| 50S ribosomal protein L4 [Ruminococcus torques ATCC 27756]
Length = 206
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++ L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 AKVSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A++S
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALSSRVEEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E + F+ KTK+F + KA ++ + + N E S+RNI +K
Sbjct: 122 KFIVVDEMN--FDEIKTKKFQNVLN---NLNVNKALVVLEDGNTNAEISARNIAGVKTAR 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 177 TNTINVYDILKYNTVIATKAAV 198
>gi|358065650|ref|ZP_09152186.1| 50S ribosomal protein L4 [Clostridium hathewayi WAL-18680]
gi|356696136|gb|EHI57759.1| 50S ribosomal protein L4 [Clostridium hathewayi WAL-18680]
Length = 206
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH +++ + NKR+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGKEVGTLELNDAVFGVEINEHLVHLSVVAQLANKRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD++I++NKKEKR A+ +A+ S
Sbjct: 64 PWKQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYTIRLNKKEKRAALKSALTSRVNDNKF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E KF+ KTK+F M + KA ++ + S N S+RNI +K
Sbjct: 124 IVVDEM--KFDEIKTKKFQNVMDSLKVS---KALVVLEDGSNNAVLSARNIQDVKTAYVN 178
Query: 234 TLNLFDIL 241
T+N++DIL
Sbjct: 179 TINVYDIL 186
>gi|336419086|ref|ZP_08599353.1| ribosomal protein L4/L1 family protein [Fusobacterium sp. 11_3_2]
gi|336164091|gb|EGN67003.1| ribosomal protein L4/L1 family protein [Fusobacterium sp. 11_3_2]
Length = 209
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + GE+ G ++ + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNIYNLAGEQTGTVEVNDAVFGIKPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGN- 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
I+V ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 123 ILVLDYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|442806055|ref|YP_007374204.1| 50S ribosomal protein L4 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741905|gb|AGC69594.1| 50S ribosomal protein L4 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 208
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 114/200 (57%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE +G+ YL + +H A++ + N R+GT S TR EVRGGGRK
Sbjct: 4 VDVYNIKGEVVGDIYLSDDIFGVEVNTDAMHTAVVNHLANTRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGGV F PKPR + I KK KRLA+ +A+ + N
Sbjct: 64 PWRQKGTGRARQGSIRAVQWKGGGVAFAPKPRSYRYTIPKKLKRLALKSALTTKVLDNNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E + KTKEF++ ++ + + A ++ EV E V KS+RNI +K
Sbjct: 124 IVLDEL--VMDEIKTKEFVKILKNLKV-ADESALVVLPEVDEKVIKSARNIPDVKTALVN 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N +DIL + ++T + V
Sbjct: 181 TINTYDILKYKKFIITKAAV 200
>gi|389816125|ref|ZP_10207312.1| 50S ribosomal protein L4 [Planococcus antarcticus DSM 14505]
gi|388465389|gb|EIM07707.1| 50S ribosomal protein L4 [Planococcus antarcticus DSM 14505]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ TG ++G+ L+ + +V+ A+++ + R+G R EV GGG+K
Sbjct: 4 VALLNQTGSQVGDIELNDYVFGIEPNESVLFDAVVSQRASLRQGNHKVKNRSEVAGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ +A++SA +N
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLALRSALSSAVVGKNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTK F + ++ L +KA F+ ++ ENV KS+RN+ + ++
Sbjct: 124 MVLEGL--TFDAPKTKAFTQLIQD--LSIGKKALFVTADLDENVAKSARNLHGMTVVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + +V+T + ++
Sbjct: 180 GINVLDLLGHDKIVMTKAAIE 200
>gi|169823853|ref|YP_001691464.1| 50S ribosomal protein L4 [Finegoldia magna ATCC 29328]
gi|302379795|ref|ZP_07268279.1| 50S ribosomal protein L4 [Finegoldia magna ACS-171-V-Col3]
gi|303234753|ref|ZP_07321379.1| 50S ribosomal protein L4 [Finegoldia magna BVS033A4]
gi|417925299|ref|ZP_12568725.1| 50S ribosomal protein L4 [Finegoldia magna SY403409CC001050417]
gi|226730666|sp|B0RZU1.1|RL4_FINM2 RecName: Full=50S ribosomal protein L4
gi|167830658|dbj|BAG07574.1| 50S ribosomal protein L4 [Finegoldia magna ATCC 29328]
gi|302312383|gb|EFK94380.1| 50S ribosomal protein L4 [Finegoldia magna ACS-171-V-Col3]
gi|302494094|gb|EFL53874.1| 50S ribosomal protein L4 [Finegoldia magna BVS033A4]
gi|341592019|gb|EGS34915.1| 50S ribosomal protein L4 [Finegoldia magna SY403409CC001050417]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 4/203 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL+ GE +GE L+ D VV+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VQILNQQGENVGELELNEAIFGVDVNEHVVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S + KK +RLAI + +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTEKVNDNEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + + TK+ +E ++ D +KA ++ + + + +S RNI + + +
Sbjct: 124 IVLDKLN--LDAISTKKAVEVLKNIKAD--KKALVVIDKNDDTLYRSFRNIENVAICEAK 179
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
+N++D L +LV+T V L
Sbjct: 180 LINVYDCLKYNSLVITTDAVKIL 202
>gi|85858147|ref|YP_460349.1| 50S ribosomal protein L4 [Syntrophus aciditrophicus SB]
gi|109893644|sp|Q2LQA0.1|RL4_SYNAS RecName: Full=50S ribosomal protein L4
gi|85721238|gb|ABC76181.1| LSU ribosomal protein L4 [Syntrophus aciditrophicus SB]
Length = 217
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ K+ E L+ + AV++ + M ++R GTA+T R +V GGG+KP+
Sbjct: 16 VFDINKNKVSEIELNDAVFGAEVNDAVIYDVVRMQMASRRFGTAATKGRSDVSGGGKKPW 75
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR G++R+P+ GGG+VFGP PRD+ + KK ++ A+ + ++ + +V
Sbjct: 76 RQKGTGRARSGTSRSPIWRGGGIVFGPVPRDYKYNVPKKVRKNALRSVLSLKYQGQKLVV 135
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++F + KTK+F E + R+GL +KA F+ E +E +EKSSRNI +KM+ L
Sbjct: 136 LKDFP--LDEIKTKKFKEVVDRFGL---KKALFVTEERNEFLEKSSRNIAGIKMVRSEGL 190
Query: 236 NLFDILDAETLVLTPSTVDFLNG 258
N++D+L+ E LV+ V L G
Sbjct: 191 NVYDVLNHEHLVIIEPAVKKLEG 213
>gi|291542036|emb|CBL15146.1| LSU ribosomal protein L4P [Ruminococcus bromii L2-63]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ +G L + AV+H+ ++ + +R+GT S LTR EV GGG+K
Sbjct: 4 LAVVDMEGKNVGTIELAESVFGIEPNAAVMHQMVVNYLAAQRQGTQSALTRSEVSGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVF PKPRD+ +NKK +RLA+ +A +S
Sbjct: 64 PWRQKGTGRARQGSTRAPQWTHGGVVFAPKPRDYRFSVNKKVRRLAMKSAFSSKVMENEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ + KTK+ + + G + +KA ++ EV V KS+ NI +K
Sbjct: 124 IVVDSIS--MDEYKTKKIVAMLSAIGAE--KKALIVLPEVDSKVIKSANNIPGVKTAQVN 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
TLN++DIL+A+ L++ V + Y
Sbjct: 180 TLNVYDILNADKLIIVKDAVSKIEEVYA 207
>gi|345021330|ref|ZP_08784943.1| 50S ribosomal protein L4 [Ornithinibacillus scapharcae TW25]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + V+H A++ + R+GT + R EVRGGGRKP+ QK T
Sbjct: 11 GSQAGEFELNESVFGIEPNTHVLHEAVVMQRASMRQGTHAVKNRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ +A++S +N IV+E
Sbjct: 71 GRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLALKSALSSKVNEQNLIVLENI- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ PKTKE ++ + L+ ++KA + + ENV +S+ NI +K+L+ +N+ D+
Sbjct: 130 -AIDAPKTKEVVKMLS--ALNVERKALIVTADTDENVIRSANNIQGVKVLSVTEVNVLDL 186
Query: 241 LDAETLVLT 249
L + L+ T
Sbjct: 187 LSHDKLIFT 195
>gi|312109262|ref|YP_003987578.1| 50S ribosomal protein L4/L1e [Geobacillus sp. Y4.1MC1]
gi|336233656|ref|YP_004586272.1| 50S ribosomal protein L4 [Geobacillus thermoglucosidasius C56-YS93]
gi|423718377|ref|ZP_17692559.1| 50S ribosomal protein L4/L1e [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214363|gb|ADP72967.1| ribosomal protein L4/L1e [Geobacillus sp. Y4.1MC1]
gi|335360511|gb|AEH46191.1| ribosomal protein L4/L1e [Geobacillus thermoglucosidasius C56-YS93]
gi|383365187|gb|EID42488.1| 50S ribosomal protein L4/L1e [Geobacillus thermoglucosidans
TNO-09.020]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
GE IGE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 NGETIGEIELNDSVFGIEPNKHVLFEAVIMQRASLRQGTHKTKNRAEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S N +V++
Sbjct: 70 TGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLENNIVVLDNL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTKE ++ + +D +KA + +ENV S+RNI + ++T +N+ D
Sbjct: 130 T--LEAPKTKEMVKILNNLSVD--RKALIVTDVANENVALSARNIPGVTVVTANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 LLNHDKLVITKAAVE 200
>gi|422338830|ref|ZP_16419790.1| ribosomal protein L4/L1 family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355371957|gb|EHG19300.1| ribosomal protein L4/L1 family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 209
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + G++ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNVYNLAGDQTGTLEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|237742671|ref|ZP_04573152.1| LSU ribosomal protein L1E [Fusobacterium sp. 4_1_13]
gi|256846066|ref|ZP_05551524.1| ribosomal protein L4/L1 [Fusobacterium sp. 3_1_36A2]
gi|229430319|gb|EEO40531.1| LSU ribosomal protein L1E [Fusobacterium sp. 4_1_13]
gi|256719625|gb|EEU33180.1| ribosomal protein L4/L1 [Fusobacterium sp. 3_1_36A2]
Length = 209
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + G++ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNVYNLAGDQTGTLEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|269101056|ref|YP_003289204.1| 50S ribosomal protein L4 [Ectocarpus siliculosus]
gi|266631564|emb|CAV31235.1| Chloroplast 50S ribosomal protein L4 [Ectocarpus siliculosus]
gi|270118694|emb|CAT18764.1| Chloroplast 50S ribosomal protein L4 [Ectocarpus siliculosus]
Length = 232
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 125/214 (58%), Gaps = 9/214 (4%)
Query: 50 LASPLPILSFTGEKIGETY---LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGE 106
L PL +L TGE+ ET L +K +T +++RA I N+R+GT +TLTR E
Sbjct: 23 LTFPLKLL--TGEEKNETVSLTLQIKEGQ-ETDNYILYRAYIAQRTNERQGTVNTLTRAE 79
Query: 107 VRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIAS 166
V+GGGRKP+ QK TGRAR GSNR+PL GGGV FGPKP+ + K+N+KE +LA+ I
Sbjct: 80 VKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKTYINKLNRKEWQLAVRGLI-- 137
Query: 167 AAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGT 226
E +I + + + KT FI + + + TF+V + EN+ K +RNI T
Sbjct: 138 -ILKEPSITIIDHNFSSIDNKTNIFINLFKGCDISFSKNITFIVPAIEENLFKVTRNIKT 196
Query: 227 LKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+ ++ TLNL +L+++ L ++ ++ + Y
Sbjct: 197 VTIMRADTLNLITLLESDHLFISKDSLKIIEEIY 230
>gi|299541933|ref|ZP_07052256.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZC1]
gi|424739372|ref|ZP_18167791.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZB2]
gi|298725671|gb|EFI66312.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZC1]
gi|422946769|gb|EKU41175.1| 50S ribosomal protein L4 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +LS TG +GE L+ + AV+ A++ + R+G R EV GGG
Sbjct: 2 TKVSVLSQTGASVGEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSEVAGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLA+ +A+++ +
Sbjct: 62 RKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLALKSALSAKVVEQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N +V++ PKTKEF + ++ L+ +K+ F+ ++ ENV S+RNI + +LT
Sbjct: 122 NFLVLDALT--LAAPKTKEFTKILKDLSLE--KKSLFVTADLDENVALSARNIPGVTVLT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
+N+ D+L + +V T S V+
Sbjct: 178 ANGINVLDLLGHDKVVFTKSAVE 200
>gi|161485627|ref|YP_064861.2| 50S ribosomal protein L4 [Desulfotalea psychrophila LSv54]
Length = 207
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 5/211 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + +++ EK+ E L+ + ++H + KR GTAST TR EVRGGG
Sbjct: 2 STVSVVNTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
KP+ QK TGRAR GS +PL GGGV FGPKPRD+S K+N+K ++ A+S A+++
Sbjct: 62 AKPWRQKGTGRARAGSRTSPLWRGGGVTFGPKPRDYSFKLNRKVRQQAVSMALSARFQEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ F + KTKEF M+ L A ++ + SEN+ KS RN+ ++L
Sbjct: 122 NLIVLDNF--IMDAIKTKEFASTMKTLEL---ANALIVMDDASENLSKSCRNVHGYRILP 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
LN++DIL + +VL ++ L R V
Sbjct: 177 AEGLNVYDILLHKKVVLVKPVIESLEKRLMV 207
>gi|315918266|ref|ZP_07914506.1| LSU ribosomal protein L1E [Fusobacterium gonidiaformans ATCC 25563]
gi|317059804|ref|ZP_07924289.1| LSU ribosomal protein L1E [Fusobacterium sp. 3_1_5R]
gi|313685480|gb|EFS22315.1| LSU ribosomal protein L1E [Fusobacterium sp. 3_1_5R]
gi|313692141|gb|EFS28976.1| LSU ribosomal protein L1E [Fusobacterium gonidiaformans ATCC 25563]
Length = 210
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I G + G ++ + + V+H L ++ R+GTA+T TR VRGGGRK
Sbjct: 4 LNIYDLAGNQTGTVEVNEAVFGIEPNKTVLHEVLTAELAAARQGTAATKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP+PR + K+NKK + LA+ +A+ SA A N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPQPRSYEKKVNKKVRNLALRSAL-SAKVANNQ 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKM 229
IVV +G E PKTK + + + +D KQK F+V ++++ N+ S+RN+ +
Sbjct: 123 IVV--LEGAVEAPKTKTIVNLVNK--IDAKQKQLFVVNDLTDVKDYNLYLSARNLENAVV 178
Query: 230 LTPRTLNLFDILDAETLVLT 249
L P + ++ +L E ++LT
Sbjct: 179 LQPNEIGVYWLLKQEKVILT 198
>gi|306821619|ref|ZP_07455217.1| ribosomal protein L4/L1 family protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550364|gb|EFM38357.1| ribosomal protein L4/L1 family protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 208
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G+ + + + A V+ A+ + NKR+GT T TR EVRGGGRK
Sbjct: 4 IDVLDINGKVVEQMEISEALFAAKVNEHCVYEAVKNHLANKRQGTQCTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KINKK KR+A+ + +
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYKINKKIKRIALKSVLTDKVQNNKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+ E KTK F + M+ L K F+ E V +S RNI + +
Sbjct: 124 VVLNEL--VISDAKTKAFAQVMKNLQLSG-VKTLFVTKENDPEVVRSGRNIKGVDITFAN 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N +DI++ E LV+T V
Sbjct: 181 LINTYDIINHEVLVMTKDAV 200
>gi|406666921|ref|ZP_11074684.1| 50S ribosomal protein L4 [Bacillus isronensis B3W22]
gi|405385204|gb|EKB44640.1| 50S ribosomal protein L4 [Bacillus isronensis B3W22]
Length = 207
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +LS TG +GE L+ + AV+ A++ + R+G R V GGG
Sbjct: 2 TKVSVLSQTGASVGEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSAVAGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A+++ +
Sbjct: 62 RKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSAKVLEQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N +V++ F+ PKTK+F + L+ +KA F+ EV+EN S+RNI + +LT
Sbjct: 122 NLVVLDALS--FDAPKTKDFKSVLA--ALEISKKALFVTAEVNENAILSARNIPGVTVLT 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N+ D+L + +V T V
Sbjct: 178 AEGINVLDLLGHDKVVFTQDAV 199
>gi|152973957|ref|YP_001373474.1| 50S ribosomal protein L4 [Bacillus cytotoxicus NVH 391-98]
gi|189029490|sp|A7GK21.1|RL4_BACCN RecName: Full=50S ribosomal protein L4
gi|152022709|gb|ABS20479.1| ribosomal protein L4/L1e [Bacillus cytotoxicus NVH 391-98]
Length = 207
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + TG ++GE L + AV+ A++ + R+GT R EV GGGRKP+
Sbjct: 6 VYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVVMQRASLRQGTHKVKNRSEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A+A+ N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+ PKTK+ + ++ GL ++KA + +V+E VE S+RNI + ++T +
Sbjct: 126 LEDL--VLNAPKTKDMVAVLK--GLAVEKKALIVTADVNEAVELSARNIPGVTVITADGV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + L++T + V+
Sbjct: 182 NVLDVLHHDKLIMTKAAVE 200
>gi|317501775|ref|ZP_07959961.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088704|ref|ZP_08337614.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439587|ref|ZP_08619198.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_1_57FAA]
gi|316896808|gb|EFV18893.1| ribosomal protein L4/L1 family protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407227|gb|EGG86730.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015816|gb|EGN45618.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 206
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G+++ L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 AKVSVYNIEGKEVDTIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+S K+NKKEKR A+ +A++S
Sbjct: 62 RKPWRQKGTGHARQGSTRAPQWTGGGVVFAPVPRDYSFKMNKKEKRAALKSALSSRVEEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+E + F+ KTK+F + KA ++ + + N E S+RNI +K
Sbjct: 122 KFIVVDEMN--FDEIKTKKFQNVLN---NLNVNKALVVLEDGNINAEISARNIAGVKTAR 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++DIL T++ T + V
Sbjct: 177 TNTINVYDILKYNTVIATKAAV 198
>gi|260893371|ref|YP_003239468.1| 50S ribosomal protein L4 [Ammonifex degensii KC4]
gi|260865512|gb|ACX52618.1| ribosomal protein L4/L1e [Ammonifex degensii KC4]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 115/195 (58%), Gaps = 6/195 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE +GE L + + VVH ++ + N+RRGT ST TRGEVRGGGRKP+
Sbjct: 6 VYNLAGEPVGEMELKEEVFGIEPNPYVVHEVVVMHLANRRRGTHSTKTRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+P+ GGVVFGPKPRD+ + KK +RLA+ + ++ A N +V
Sbjct: 66 RQKGTGRARHGSIRSPIWRKGGVVFGPKPRDYDYTVPKKVRRLALKSVLSDKLRAGNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRT 234
+EE + E PKTK E + R+G+ + LV + V K ++ N+ +K L
Sbjct: 126 LEEL--RLEAPKTKLAKELLSRFGV---ETGVLLVGADPDPVVKLATANLEGVKFLPVNN 180
Query: 235 LNLFDILDAETLVLT 249
LN++D+L + +T
Sbjct: 181 LNVYDLLRYPKVFIT 195
>gi|297588192|ref|ZP_06946836.1| ribosomal protein L4/L1 family protein [Finegoldia magna ATCC
53516]
gi|297574881|gb|EFH93601.1| ribosomal protein L4/L1 family protein [Finegoldia magna ATCC
53516]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 4/203 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL+ GE +GE L+ D VV+ + + NKR+GT S TR EVRGGG+K
Sbjct: 4 VQILNQQGENVGELELNEAIFGVDVNEHVVYEVVRNQLANKRQGTQSAKTRSEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S + KK +RLAI + +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTDKVNDNEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + TK+ +E ++ D +KA +V + + + +S RNI + + R
Sbjct: 124 IVLDKLS--LDAISTKKAVEVLKNIKAD--KKALVVVDKNDDTLYRSFRNIENVAICEAR 179
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
+N++D L +LV+T V L
Sbjct: 180 LINVYDCLKYNSLVITTDAVKIL 202
>gi|291547983|emb|CBL21091.1| LSU ribosomal protein L4P [Ruminococcus sp. SR1/5]
Length = 206
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G L+ + +VH A++ + N R+GT TR EVRGGGRK
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+ +K+NKKE+R A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQDNKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ KTKE + + +KA + + +NV S+RNI ++ TP
Sbjct: 124 VVVDSL--ALAEVKTKEMQKVLTNL---KAEKALVITADNDQNVVLSARNIADVETATPA 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N +D++ T+V+T V
Sbjct: 179 TINTYDVMKHNTVVVTKDAV 198
>gi|260891593|ref|ZP_05902856.1| hypothetical protein GCWU000323_02808 [Leptotrichia hofstadii
F0254]
gi|260858701|gb|EEX73201.1| ribosomal protein L4/L1 family protein [Leptotrichia hofstadii
F0254]
Length = 214
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 9/202 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I G + G ++ + + V+H L+ ++ R+G+AST TR EVRGGGRK
Sbjct: 4 LNIYKLDGSQAGTIEVNNDVFGIEPNKHVMHEVLVAELAEARQGSASTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GPKPR+++ K+NKK ++LA+ +A+A+ N
Sbjct: 64 PFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRNYAKKVNKKVRKLALKSALATKINEGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK------SSRNIGTL 227
IV+++F E PKTK FI + D K ++ + ++N+++ S+RNI +
Sbjct: 124 IVLDDF--TLETPKTKTFINFAKALNFDG-VKQLYITNDDTDNIDRDYFLYLSTRNIEKV 180
Query: 228 KMLTPRTLNLFDILDAETLVLT 249
+ R L+++ ++ + ++LT
Sbjct: 181 AAINTRDLSIYWLIKQDKVILT 202
>gi|294496986|ref|YP_003560686.1| 50S ribosomal protein L4 [Bacillus megaterium QM B1551]
gi|294346923|gb|ADE67252.1| 50S ribosomal protein L4 [Bacillus megaterium QM B1551]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE +GE L + V+ A++ ++R+GT+ R EVRGGGRK
Sbjct: 4 VALFNQNGENVGEIELQDAVFGIEPNNKVLFDAIVMQRASQRQGTSKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A+++ +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPVPRSYSYKLPKKVRRLAIKSALSTKVQDNSI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTKE + ++ L ++KA + +++ENV S+RNI + ++
Sbjct: 124 VVLEALS--FDAPKTKEMVAVLK--NLTVERKALVVTADLNENVALSARNIPGVTVVAAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
L++ D+++ + LV+T V+
Sbjct: 180 GLSVLDVMNHDKLVITKDAVE 200
>gi|403385667|ref|ZP_10927724.1| 50S ribosomal protein L4 [Kurthia sp. JC30]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+LS TG +GE L+ + +V+ A++ + R+GT T R EV GGGRKP+
Sbjct: 6 VLSQTGSSVGEIELNDAIFGIEPNESVLFDAIVAQRASLRQGTHKTKGRSEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG+VFGP PR ++ K+ KK +RLA+ +A+++ A N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLALKSALSTKVAETNFVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ PKTK+F++ + L + K+ + +V+ENV S+RNI + +LT +
Sbjct: 126 VDALT--LNAPKTKDFVKVLA--DLSVESKSLIVTADVNENVALSARNIPGVTVLTVEGI 181
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D++ A +V+T V
Sbjct: 182 NILDLVSANKVVITKDAV 199
>gi|358465881|ref|ZP_09175766.1| hypothetical protein HMPREF9093_00226 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069586|gb|EHI79479.1| hypothetical protein HMPREF9093_00226 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 209
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + G++ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNVYNLAGDQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++DG + PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYDG-IDTPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|94266252|ref|ZP_01289959.1| Ribosomal protein L4/L1e [delta proteobacterium MLMS-1]
gi|93453178|gb|EAT03642.1| Ribosomal protein L4/L1e [delta proteobacterium MLMS-1]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + + EK+GE L+ + + ++H + N+R GTA+T TR EV G +KP+
Sbjct: 6 IYNTSKEKVGEIDLNDQLVKLEVNPHLLHDIVRMQRANRRAGTAATKTRKEVSGSSKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR G+ ++P+ GGG VFGP+PRD+S ++ +K +RL + AI++ + +V
Sbjct: 66 RQKGTGRARAGTRKSPVWRGGGTVFGPQPRDYSFRMPRKARRLGLRMAISARYQEDMLLV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+F + + KTK+F+E M + +D A +V E EN+E+SSRN+ K+L L
Sbjct: 126 LEDF--QLDEIKTKKFVEVMDNFAID---NALIVVAERLENLERSSRNVPGFKVLPAEGL 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGR 259
N++DIL + ++L +V L R
Sbjct: 181 NVYDILLHKHIILLKPSVGQLEER 204
>gi|295111421|emb|CBL28171.1| LSU ribosomal protein L4P [Synergistetes bacterium SGP1]
Length = 207
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ F+G+ GE L A +H+ ++ + N R+GT + TRG+V GGG+K
Sbjct: 4 IKVVDFSGQSAGEMELSEVVFGAPIHVAAMHQVVVAHLANCRQGTHAVKTRGDVSGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+PL GGV GPK RD+S K+NKK +RLA+ +A++
Sbjct: 64 PWRQKHTGRARQGSTRSPLWVHGGVAHGPKMRDYSQKVNKKVRRLALLSALSVKVRDAQM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV + E P TK M G +KA + ENV +S RNI + L
Sbjct: 124 LVVRGME--MEAPSTKTMKGFMDAIG---AEKALVIYSGNGENVARSVRNIPGARYLNVA 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
++N++D+L++ TLV+TP V L Y
Sbjct: 179 SINVYDLLNSRTLVVTPEVVARLEEVY 205
>gi|215400771|ref|YP_002327532.1| ribosomal protein L4 [Vaucheria litorea]
gi|194441221|gb|ACF70949.1| ribosomal protein L4 [Vaucheria litorea]
Length = 220
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 10/188 (5%)
Query: 77 DTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGG 136
+ + ++HRAL T + N+R+GT++T TR EV+GGGRKP+ QK TGRAR GSNR+PL GG
Sbjct: 38 NKSNYLLHRALQTQLTNERQGTSNTKTRAEVQGGGRKPWKQKGTGRARAGSNRSPLWRGG 97
Query: 137 GVVFGPKPRDWSIKINKKEKRLAISTAIASAA---AAENTIVVEEFDGKFERPKTKEFIE 193
GV+FGPK + +S KIN+KE RL++ + + NTI ++ F KTK I+
Sbjct: 98 GVIFGPKIKKFSNKINRKEWRLSLRLLLLNKQKNITIINTIFLDFF-------KTKNIIQ 150
Query: 194 AMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ + G+DP QK ++ EN+ + ++N+ +++L LN+ DIL AE + + +++
Sbjct: 151 YILKLGIDPLQKLVIIIPNYDENLRRGTKNLKNVQLLKANCLNIKDILKAEHIFIDINSL 210
Query: 254 DFLNGRYG 261
+ Y
Sbjct: 211 KIIEETYN 218
>gi|390934122|ref|YP_006391627.1| 50S ribosomal protein L4 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569623|gb|AFK86028.1| ribosomal protein L4/L1e [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 206
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + E+IGE L + V+H A++ + N+R+GT ST RGEVRGGG K
Sbjct: 4 VAVYNINAEQIGEIELSDNVFGVEVNVPVMHEAVLNYLANQRQGTHSTKRRGEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVFGPKPRD+S I KK KRLA+ +A+ S+ +N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVKGGVVFGPKPRDYSYNIPKKVKRLALKSAL-SSKVRDNE 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I+V + E PKTK+ E ++++ + + A ++ E ENV SSRNI +K +
Sbjct: 123 IIVIDDINIDE-PKTKKIAEMLKKFDV---KNALIVIPEGKENVVLSSRNIPNVKAVFAN 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+LN +D+L + ++T V+
Sbjct: 179 SLNTYDVLKYDRFIITKDAVN 199
>gi|302388713|ref|YP_003824534.1| 50S ribosomal protein L4P [Thermosediminibacter oceani DSM 16646]
gi|302199341|gb|ADL06911.1| LSU ribosomal protein L4P [Thermosediminibacter oceani DSM 16646]
Length = 208
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++GE L + V+H+ ++ + N+R GTAST TR EVRGGGRK
Sbjct: 4 VALYNMQGQQVGEVELSDSVFGVEVKPEVMHQVVLNYLANQRVGTASTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GG+VFGPKPR + + KK KRLA+ +A+++
Sbjct: 64 PWRQKGTGRARHGSIRSPLWRKGGIVFGPKPRSYKYTLPKKLKRLALKSALSAKVRDNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLTP 232
IV++ E PKTKE ++ + D K + +V++ S+ NV KS+RNI + T
Sbjct: 124 IVLDRLT--MEAPKTKEMVKVLSNLKADTK---SLIVLDASDVNVVKSARNIPGVTTTTV 178
Query: 233 RTLNLFDILDAETLVLTPSTV 253
TLN++DIL+ + L++T V
Sbjct: 179 NTLNVYDILNHDKLIMTMDAV 199
>gi|340755334|ref|ZP_08692024.1| 50S ribosomal protein L4 [Fusobacterium sp. D12]
gi|419841115|ref|ZP_14364493.1| 50S ribosomal protein L4 [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500279|ref|ZP_15947290.1| 50S ribosomal protein L4 [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313687161|gb|EFS23996.1| 50S ribosomal protein L4 [Fusobacterium sp. D12]
gi|386906134|gb|EIJ70879.1| 50S ribosomal protein L4 [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402268693|gb|EJU18059.1| 50S ribosomal protein L4 [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 210
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I G + G ++ + + V+H L ++ R+GTA+T TR VRGGGRK
Sbjct: 4 LNIYDLAGNQTGTVEVNEAVFGIEPNKTVLHEVLTAELAAARQGTAATKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP+PR + K+NKK + LA+ +A+ SA A N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPQPRSYEKKVNKKVRNLALRSAL-SAKVANNE 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKM 229
+VV +G E PKTK + + + +D KQK F+V ++++ N+ S+RN+ +
Sbjct: 123 VVV--LEGAIEAPKTKTIVNLVNK--IDAKQKQLFVVNDLTDVKDYNLYLSARNLENAVV 178
Query: 230 LTPRTLNLFDILDAETLVLT 249
L P + ++ +L E ++LT
Sbjct: 179 LQPNEIGVYWLLKQEKVILT 198
>gi|220930966|ref|YP_002507874.1| 50S ribosomal protein L4 [Halothermothrix orenii H 168]
gi|254803739|sp|B8D0C5.1|RL4_HALOH RecName: Full=50S ribosomal protein L4
gi|219992276|gb|ACL68879.1| ribosomal protein L4/L1e [Halothermothrix orenii H 168]
Length = 209
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 3/194 (1%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG ++G+ L + VVH+ + + RRGTAST TRGEV GGGRKP+ QK
Sbjct: 10 TGNRVGDIDLADNVFNEEVNEHVVHQVVTAQLATMRRGTASTKTRGEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR GS R+PL GGG+VFGP+PR K+ KK K+LA+ + ++ + E I+++E
Sbjct: 70 TGRARHGSIRSPLWVGGGIVFGPRPRKHIKKVPKKVKKLALRSILSYKSQNEELIILDEL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
KF+ PKTK+ +E + L+ K K ++ + N+ S+RNI +K L LN FD
Sbjct: 130 --KFDTPKTKQVVELLSNLNLEGK-KVLIILPDKDANIYLSARNIPGVKTLVVDALNAFD 186
Query: 240 ILDAETLVLTPSTV 253
+L+ + +V++ V
Sbjct: 187 LLNNDCIVMSEEAV 200
>gi|337288311|ref|YP_004627783.1| 50S ribosomal protein L4/L1e [Thermodesulfobacterium sp. OPB45]
gi|334902049|gb|AEH22855.1| ribosomal protein L4/L1e [Thermodesulfobacterium geofontis OPF15]
Length = 210
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 64 IGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTG 121
IGE L DL P ++H + M R GTA T TRGEVRGGGRKP+ QK TG
Sbjct: 16 IGEIELPSDLYGVTPKVG--LLHEVVRWQMARWRAGTACTKTRGEVRGGGRKPWPQKHTG 73
Query: 122 RARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDG 181
RAR+GS R P GGGVV GPKPR + K+NKK +RL + A++S A A V E+F
Sbjct: 74 RARQGSIRAPQWVGGGVVHGPKPRSYEFKLNKKVRRLGLKMALSSRALANKVYVAEDFPV 133
Query: 182 KFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDIL 241
K ++PKTK + G++ A +V E + +EKS+ N+ +K+L LN++DIL
Sbjct: 134 K-DKPKTKVLKNFLDTLGIN---DALIVVPERNLILEKSADNLPKVKVLAVEGLNVYDIL 189
Query: 242 DAETLVL 248
+ + L+L
Sbjct: 190 NHQNLIL 196
>gi|270291132|ref|ZP_06197355.1| 50S ribosomal protein L4/L1 [Pediococcus acidilactici 7_4]
gi|304385413|ref|ZP_07367758.1| ribosomal protein L4/L1 family protein [Pediococcus acidilactici
DSM 20284]
gi|418069690|ref|ZP_12706967.1| 50S ribosomal protein L4P [Pediococcus acidilactici MA18/5M]
gi|427442937|ref|ZP_18925765.1| 50S ribosomal protein L4/L1 [Pediococcus lolii NGRI 0510Q]
gi|270280528|gb|EFA26363.1| 50S ribosomal protein L4/L1 [Pediococcus acidilactici 7_4]
gi|304328620|gb|EFL95841.1| ribosomal protein L4/L1 family protein [Pediococcus acidilactici
DSM 20284]
gi|357536221|gb|EHJ20252.1| 50S ribosomal protein L4P [Pediococcus acidilactici MA18/5M]
gi|425786585|dbj|GAC46553.1| 50S ribosomal protein L4/L1 [Pediococcus lolii NGRI 0510Q]
Length = 207
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 113/168 (67%), Gaps = 4/168 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFEAVVMQRASMRQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ I KK +RLA+ + ++ E+ +VV+EF KFE PKTK+F +++ + L+
Sbjct: 92 PTPRSYAYSIPKKMRRLALKSVLSQKVLDESLVVVDEF--KFETPKTKDFAQSLSK--LN 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
++KA ++ E +E+ ++RN+ +K++ P +N+ DI++++ LV+T
Sbjct: 148 VEKKALLVLEEDNESAVLAARNLSNVKIVEPTGINVLDIMNSDKLVIT 195
>gi|372324928|ref|ZP_09519517.1| LSU ribosomal protein L4p (L1e) [Oenococcus kitaharae DSM 17330]
gi|366983736|gb|EHN59135.1| LSU ribosomal protein L4p (L1e) [Oenococcus kitaharae DSM 17330]
Length = 207
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K GE L+ A AVV A++ + R+GT S R V GGGRKP+ QK T
Sbjct: 11 GAKAGEVELNDAVFAIVPNEAVVTDAVLMQRASMRQGTHSVKNRSAVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
G AR+GS R P GGG+ GP PR +S KIN+K RLA+ +A++ A +N IVV++FD
Sbjct: 71 GNARQGSIRAPQWRGGGISMGPTPRSYSYKINRKAYRLALKSALSDKVAQQNFIVVDKFD 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F++P TK F E + + L+ +K ++ ENV+ S+RN+ ++++T + +N++D+
Sbjct: 131 --FDKPSTKLFAENLSK--LNSTKKTLLVIDAADENVKLSARNLPNVQVVTAQGVNVYDL 186
Query: 241 LDAETLVLTPS 251
+ A+ +V+ S
Sbjct: 187 VRAQKVVIAES 197
>gi|167629468|ref|YP_001679967.1| 50S ribosomal protein L4 [Heliobacterium modesticaldum Ice1]
gi|226730671|sp|B0TC57.1|RL4_HELMI RecName: Full=50S ribosomal protein L4
gi|167592208|gb|ABZ83956.1| 50S ribosomal protein l4 [Heliobacterium modesticaldum Ice1]
Length = 207
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G ++GE L+ + AV+H+A++T + RRGT +RGEV GGG+KP+ QK T
Sbjct: 11 GAQVGEIELNDAIFGIEPNEAVMHQAVVTQLAAWRRGTHKVKSRGEVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR G++R+PL GG ++FGP+PR + I + KK +RLA+ +A++ + N IVV+ +
Sbjct: 71 GRARAGTSRSPLWRGGAIIFGPQPRSYKIAMPKKVRRLALKSALSDKVRSGNLIVVDALE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ PKTK + + L ++KA + ++ E V KS+RNI + + +N++DI
Sbjct: 131 --MDAPKTKVIAGILNK--LKVERKALLVTADIDETVFKSARNIPGVSPVEAVGINVYDI 186
Query: 241 LDAETLVLTPSTV 253
L+ + LV+T + V
Sbjct: 187 LNHDKLVITKNAV 199
>gi|403238407|ref|ZP_10916993.1| 50S ribosomal protein L4 [Bacillus sp. 10403023]
Length = 207
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 119/195 (61%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG +GE L+ + + V+ A+I + R+GT T R EV GGGRKP+ QK
Sbjct: 10 TGSSVGEIELNDSVFGIEPNQQVLFDAVIMQRASLRQGTHKTKIRSEVAGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A+++ EN +V++
Sbjct: 70 TGRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSTKVLEENILVLDNL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
E PKTK+ + ++ GL+ +KA + +++E VE S+RNI + ++ +++ D
Sbjct: 130 --VLETPKTKDMVAVLK--GLNVDRKALIVTADINEAVELSARNIPGVTVVAANGVSVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L+ + LV+T + V+
Sbjct: 186 VLNHDKLVITKAAVE 200
>gi|218779761|ref|YP_002431079.1| 50S ribosomal protein L4 [Desulfatibacillum alkenivorans AK-01]
gi|226730651|sp|B8FET4.1|RL4_DESAA RecName: Full=50S ribosomal protein L4
gi|218761145|gb|ACL03611.1| ribosomal protein L4/L1e [Desulfatibacillum alkenivorans AK-01]
Length = 206
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 9/210 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + +GEK+ E L + + +V+H ++ + N+R GT R +VRG
Sbjct: 2 AKVEVCNMSGEKVSEIDLADEIFGVEVKGSVLHEVVVMQLANRRAGTVCVKNRSDVRGST 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RK Y QK TGRAR+G ++P+ GGGVVFGP PRD+S K+ KK ++ A+ A++S A
Sbjct: 62 RKLYRQKGTGRARKGDIKSPVLRGGGVVFGPHPRDYSYKVPKKVRKAALKMALSSKLADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKM 229
+ VV+ D KTK F EAM G+D T L++ E N+E S+RN+ +K+
Sbjct: 122 SLKVVDNMD--LPEIKTKAFAEAMAAMGVD-----TALIVTTGEEKNLELSARNVKGVKV 174
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
+ LN++DIL L+L ++ + GR
Sbjct: 175 MPTAGLNVYDILKYGNLILAQGAIEAIEGR 204
>gi|393198948|ref|YP_006460790.1| 50S ribosomal protein L4 [Solibacillus silvestris StLB046]
gi|327438279|dbj|BAK14644.1| ribosomal protein L4 [Solibacillus silvestris StLB046]
Length = 207
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +LS TG +GE L+ + AV+ A++ + R+G R V GGG
Sbjct: 2 TKVSVLSQTGASVGEIELNDAIFGIEPNEAVLFDAVVAQRASLRQGNHKVKNRSAVAGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A+++ +
Sbjct: 62 RKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSAKVLEQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N +V++ F+ PKTK+F + L+ +KA F+ EV+EN S+RNI + +LT
Sbjct: 122 NLVVLDAL--LFDAPKTKDFKSVLA--ALEISKKALFVTAEVNENAILSARNIPGVTVLT 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N+ D+L + +V T V
Sbjct: 178 AEGINVLDLLGHDKVVFTQDAV 199
>gi|336394562|ref|ZP_08575961.1| 50S ribosomal protein L4 [Lactobacillus farciminis KCTC 3681]
Length = 207
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
+VV A+I + R+GT R EVRGGGRKP+ QK TGRAR+GS R+P GGGVVF
Sbjct: 31 SVVTDAVIMQRASMRQGTHDVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWVGGGVVF 90
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR ++ + KK RLA+ + ++ AA N IV++ +++P TK F + + G
Sbjct: 91 GPTPRSYAYHLPKKVSRLALKSVLSQKAADSNLIVIDSI--SYDKPSTKAFAQLLNTVGA 148
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
D KA +V + ++NV S+RNI +K++ P +N+ D+++A LV+T + +
Sbjct: 149 D--NKALVVVEDGNDNVALSARNIDKVKVVAPEGVNVLDVINANKLVVTKAAL 199
>gi|373455303|ref|ZP_09547139.1| 50S ribosomal protein L4 [Dialister succinatiphilus YIT 11850]
gi|371934943|gb|EHO62716.1| 50S ribosomal protein L4 [Dialister succinatiphilus YIT 11850]
Length = 208
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 9/203 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G++ GE L+ D AV+H+A++ M N+R GT +T TRG VRGGG+K
Sbjct: 4 VKLYNVAGQETGEIELNDSVFGVDYNEAVIHQAVVRQMANERLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + KK ++LA+ +A++ A
Sbjct: 64 PWKQKGTGRARVGSIRSPLWVGGGTVFGPTPRSHAKAMPKKARQLAVKSALSEKLRANEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM---EVSENVEKSSRNIGTLKML 230
+V++ F+ PKTKE ++ + + K L++ + +EN S+RNI +K
Sbjct: 124 VVIDTIH--FDAPKTKEVVKMLSAFNAAGKA----LIVDGGDAAENTVLSARNIPGVKAY 177
Query: 231 TPRTLNLFDILDAETLVLTPSTV 253
P +N++DI++ + L LT V
Sbjct: 178 VPSGINIYDIVNYDKLFLTQEAV 200
>gi|319654869|ref|ZP_08008944.1| 50S ribosomal protein L4 [Bacillus sp. 2_A_57_CT2]
gi|317393432|gb|EFV74195.1| 50S ribosomal protein L4 [Bacillus sp. 2_A_57_CT2]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G K+G+ L+ + + V+ A++ + R+GT T R EV GGGRK
Sbjct: 4 VALFNQSGSKVGDIELNDAIFGIEPNQHVLFEAIVMQRASLRQGTHKTKIRSEVAGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVLEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E FE PKTK+F + GL KA + ++ ENV S+RNI + +++
Sbjct: 124 LVLEGL--AFETPKTKDFKGVLT--GLSVDSKALIVTADLDENVALSARNIPGVTVVSAS 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+ + D+L+ + L++T + V+
Sbjct: 180 GITVLDVLNHDKLIMTKAAVE 200
>gi|365157325|ref|ZP_09353599.1| 50S ribosomal protein L4 [Bacillus smithii 7_3_47FAA]
gi|363625471|gb|EHL76510.1| 50S ribosomal protein L4 [Bacillus smithii 7_3_47FAA]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
+G K+G+ L+ V+H A++ + R+GT R EV GGGRKP+ QK
Sbjct: 10 SGTKVGDIELNDSIFGITPNEHVLHEAVVMQRASLRQGTHKVKNRSEVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S N +VV+
Sbjct: 70 TGRARQGSIRAPQWRGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVNENNIVVVDTL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ F+ PKTKEF + ++ +D KA + +ENV S+RNI + ++ +N+ D
Sbjct: 130 N--FDVPKTKEFTKVLKNLSVD--TKALVVTDGSNENVVLSARNIPGVTVIDTNGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+L + L++T S V+
Sbjct: 186 VLGHDKLIMTKSAVE 200
>gi|257064319|ref|YP_003143991.1| 50S ribosomal protein L4 [Slackia heliotrinireducens DSM 20476]
gi|256791972|gb|ACV22642.1| ribosomal protein L4 [Slackia heliotrinireducens DSM 20476]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 122/205 (59%), Gaps = 4/205 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + I + +GEK E L+ + V+H + + R+GT T TRGEVRGGG
Sbjct: 2 ATIEIKNASGEKASEVELESAVFGIEPNVHVMHTVVRSQQAAMRQGTHDTKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR+G+ R P GGG VFGP PR ++ ++N+KE +LA+ +A+++ A
Sbjct: 62 KKPWRQKGTGRARQGTIRAPQWAGGGTVFGPHPRSYAFRVNRKEVKLAMRSALSAKLADG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VVE+F KFE+P TKE + ++ GLD ++ T ++ N S RNI + +++
Sbjct: 122 QLMVVEDF--KFEKPCTKEAVAFLKANGLD--RRTTIVIPNDDVNAYLSFRNIPKVNVIS 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFL 256
N +++D + LVLT ST+ L
Sbjct: 178 VGEANTMELIDNKVLVLTASTLKRL 202
>gi|433654100|ref|YP_007297808.1| 50S ribosomal protein L4, bacterial/organelle
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292289|gb|AGB18111.1| 50S ribosomal protein L4, bacterial/organelle
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 206
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE+IGE L + V+H A++ + ++R+GT ST RGEVRGGG K
Sbjct: 4 VAVYNINGEQIGEMELSDNVFGVEVNVPVMHEAVLNYLASQRQGTHSTKRRGEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVFGPKPRD+S I KK KRLA+ +A+ S+ +N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYNIPKKVKRLALKSAL-SSKVRDNE 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I+V + E PKTK+ ++ ++++ + + A ++ E +NV SSRNI +K +
Sbjct: 123 IIVIDDINIDE-PKTKKVVDMLKKFNV---KNALIVIPEDKKNVVLSSRNIPNVKAVYAN 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+LN +D+L + ++T V+
Sbjct: 179 SLNTYDVLKYDRFIITKDAVN 199
>gi|164686528|ref|ZP_02210556.1| hypothetical protein CLOBAR_00095 [Clostridium bartlettii DSM
16795]
gi|164604397|gb|EDQ97862.1| 50S ribosomal protein L4 [Clostridium bartlettii DSM 16795]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L+ G+ +GE L + V++ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 LNVLNIQGQNVGEIELSDAVFGVEVNEHVLYEVVKNQLANKRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGGV F PKPR + + KK +RLA+ +A+ S A
Sbjct: 64 PWRQKGTGRARQGSIRAVQWIGGGVAFAPKPRSYRYTLPKKVRRLAMKSALTSKVQANEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ + PKTKEF + ++ +KA ++ E +ENV KS+ NI ++
Sbjct: 124 IVLDALT--MDAPKTKEFATILN--NVNAAKKALVVMAEKNENVIKSAANIPNVETALVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DIL ++ ++T V
Sbjct: 180 TINVYDILKYDSFIITTDAV 199
>gi|347751592|ref|YP_004859157.1| 50S ribosomal protein L4 [Bacillus coagulans 36D1]
gi|347584110|gb|AEP00377.1| ribosomal protein L4/L1e [Bacillus coagulans 36D1]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 117/195 (60%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G ++GE L+ + V+ A+I + R+GT R EVRGGGRKP+ QK
Sbjct: 10 NGSQVGEVELNDAVFGIEPNEHVLFEAIIMQRASLRQGTHKVKGRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S N +V++
Sbjct: 70 TGRARQGSIRAPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVRENNILVLDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ F+ PKTK+FI ++ +D +KA + ++ENV S+RNI + ++ +N+ D
Sbjct: 130 N--FDAPKTKDFIAVLKNLSVD--KKALVVTDGLNENVVLSARNIPGITVVEATGVNVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+++ + L++T S V+
Sbjct: 186 VVNHDQLIMTKSAVE 200
>gi|294784803|ref|ZP_06750091.1| ribosomal protein L4/L1 family protein [Fusobacterium sp. 3_1_27]
gi|294486517|gb|EFG33879.1| ribosomal protein L4/L1 family protein [Fusobacterium sp. 3_1_27]
Length = 209
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 119/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + G++ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNVYNLAGDQTGTLEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++DG E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++ T
Sbjct: 180 PNEIGVYWLLKQEKVIFT 197
>gi|336112798|ref|YP_004567565.1| 50S ribosomal protein L4 [Bacillus coagulans 2-6]
gi|335366228|gb|AEH52179.1| ribosomal protein L4/L1e [Bacillus coagulans 2-6]
Length = 207
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 117/195 (60%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G ++GE L+ + V+ A+I + R+GT R EVRGGGRKP+ QK
Sbjct: 10 NGSQVGEVELNDAVFGIEPNEHVLFEAIIMQRASLRQGTHKVKGRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++S N +V++
Sbjct: 70 TGRARQGSIRSPQWRGGGTVFGPVPRSYSYKLPKKVRRLAIKSALSSKVKENNILVLDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
F+ PKTK+FI ++ +D +KA + ++ENV S+RNI + ++ +N+ D
Sbjct: 130 S--FDAPKTKDFIAVLKNLSVD--KKALVVTDGLNENVVLSARNIPGVTVVEATGVNVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+++ + L++T S V+
Sbjct: 186 VVNHDQLIMTKSAVE 200
>gi|421526107|ref|ZP_15972716.1| 50S ribosomal protein L4 [Fusobacterium nucleatum ChDC F128]
gi|402257866|gb|EJU08339.1| 50S ribosomal protein L4 [Fusobacterium nucleatum ChDC F128]
Length = 209
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 118/198 (59%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + GE+ G + + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNIYNLAGEQTGTVEVKDTVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALKSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++D E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYD-VIETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|78189806|ref|YP_380144.1| 50S ribosomal protein L4 [Chlorobium chlorochromatii CaD3]
gi|109893584|sp|Q3APH4.1|RL4_CHLCH RecName: Full=50S ribosomal protein L4
gi|78172005|gb|ABB29101.1| LSU ribosomal protein L4P [Chlorobium chlorochromatii CaD3]
Length = 208
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 21/195 (10%)
Query: 68 YLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGS 127
YLD+KS + NKR+GT TR EVRGGG+KP+ QK TG AR+GS
Sbjct: 34 YLDVKSI----------------LANKRQGTHKAKTRSEVRGGGKKPFRQKGTGNARQGS 77
Query: 128 NRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPK 187
+R+P+ GGG +FGP+P + K+NKK K LA +A+++ A A +VV++F +F+ K
Sbjct: 78 SRSPIHVGGGTIFGPQPHTYEQKVNKKVKLLARRSALSAKAQAGKIVVVDDF--RFDAIK 135
Query: 188 TKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETL 246
TK F + ++ GLD K+ T L+M E V +S RNI L+++T + +DIL + TL
Sbjct: 136 TKPFADILKNLGLDAKK--TLLLMPEYDMVVNRSGRNIAKLEIMTADKASTYDILYSNTL 193
Query: 247 VLTPSTVDFLNGRYG 261
++ S + ++ G
Sbjct: 194 LVQKSALKTIDETLG 208
>gi|373116805|ref|ZP_09530956.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 7_1_58FAA]
gi|371668881|gb|EHO33985.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 7_1_58FAA]
Length = 206
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 119/195 (61%), Gaps = 9/195 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+++ G ++GE L + + VVH + + N R+GT S LTR EV GGG KP+
Sbjct: 6 LVNMAGTQVGEVELSEAVFGIEPNQTVVHEVVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GG+VF PKPRD+S +NKK KRLA+ +A+++ AA+ + +V
Sbjct: 66 RQKGTGRARQGSTRAPQWTHGGIVFAPKPRDYSYVLNKKVKRLALKSALSAKAASGDIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDP--KQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+ + + KTK AM+ + LD +KA + EV+E V KS+RNI + T +
Sbjct: 126 VDSLN--LDEVKTK----AMKGF-LDTVGAKKAVVVTPEVNETVIKSARNIPGVVTTTAK 178
Query: 234 TLNLFDILDAETLVL 248
L+++DI++A ++
Sbjct: 179 ILSVYDIVNAGKFIV 193
>gi|297582451|ref|YP_003698231.1| 50S ribosomal protein L4/L1e [Bacillus selenitireducens MLS10]
gi|297140908|gb|ADH97665.1| ribosomal protein L4/L1e [Bacillus selenitireducens MLS10]
Length = 207
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG + G+ L+ + +VV+ A+I + R+GT + R +VRGGGRKP+ QK
Sbjct: 10 TGSQAGDIELNDAVFGIEPNESVVYDAIIMQQASMRQGTHAVKGRSDVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR G+NR+P+ GGGVVFGP PR ++ + KK++RLA+ +A++S + V+E
Sbjct: 70 TGRARHGTNRSPIWVGGGVVFGPTPRSYAYNMPKKQRRLALKSALSSKVNEDAIYVMEGL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
F+ PKTKE + + L +K + + +NV S+RN+ +K +T +N+ D
Sbjct: 130 S--FDAPKTKEMKKVLE--ALSAGKKVLVVTADYEDNVALSARNLPNVKFVTAEGVNVLD 185
Query: 240 ILDAETLVLTPSTV 253
+++ E+LV+T V
Sbjct: 186 LVNFESLVITQDAV 199
>gi|402299395|ref|ZP_10819006.1| 50S ribosomal protein L4 [Bacillus alcalophilus ATCC 27647]
gi|401725433|gb|EJS98718.1| 50S ribosomal protein L4 [Bacillus alcalophilus ATCC 27647]
Length = 207
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++G+ L + +AV+H A++ + R+GT T R EVRGGGRK
Sbjct: 4 VALFNQSGSQVGDIELVESIFGLEPNKAVLHDAIVMQQASLRQGTHKTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGVVFGP PR +S K+ KK +RLAI +A++S A
Sbjct: 64 PWRQKGTGRARQGTIRAPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKAAEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E+ KF+ KTK+ + + +D KA + E V S+RNI + +T
Sbjct: 124 VVLEDL--KFDSIKTKDMVNVLAALSVD--SKALVVTANYDEKVALSARNIPGVTFVTAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D++ + L++T V+
Sbjct: 180 GVNVLDVIKHDKLIITKEAVE 200
>gi|365845085|ref|ZP_09385883.1| 50S ribosomal protein L4 [Flavonifractor plautii ATCC 29863]
gi|364562009|gb|EHM39881.1| 50S ribosomal protein L4 [Flavonifractor plautii ATCC 29863]
Length = 206
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 119/195 (61%), Gaps = 9/195 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+++ G ++GE L + + VVH + + N R+GT S LTR EV GGG KP+
Sbjct: 6 LVNMAGTQVGEVELSEAVFGIEPNQTVVHEVVKNHLANCRQGTQSALTRAEVSGGGIKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GG+VF PKPRD+S +NKK KRLA+ +A+++ AA+ + +V
Sbjct: 66 RQKGTGRARQGSTRAPQWTHGGIVFAPKPRDYSYVLNKKVKRLALKSALSAKAASGDIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDP--KQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+ + + KTK AM+ + LD +KA + EV+E V KS+RNI + T +
Sbjct: 126 VDSLN--LDEVKTK----AMKGF-LDTVGAKKAVVVTPEVNETVIKSARNIPGVVTTTAK 178
Query: 234 TLNLFDILDAETLVL 248
L+++DI++A ++
Sbjct: 179 ILSVYDIVNAGKFIV 193
>gi|291544461|emb|CBL17570.1| LSU ribosomal protein L4P [Ruminococcus champanellensis 18P13]
Length = 207
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + TG ++ ET L AV+H ++ + N+R+GT STLTR EV GGG
Sbjct: 2 AKVSVFDMTGNQVSETELSDAVFGITPNEAVMHAMVVNYLANQRQGTQSTLTRTEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGV GPKPRD+ +NKK +RLA+ +A++S
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWYHGGVALGPKPRDYRYALNKKVRRLAMKSALSSKVLEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV++ + KTK + ++ L+ + KA + E + V KS+ NI +K
Sbjct: 122 NIIVLDALT--VDSYKTKTIVAMLK--ALNVEGKALIVTAEADKKVIKSAANIPGVKTAA 177
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
TLN++DIL+ + ++ + V
Sbjct: 178 VNTLNVYDILNYDKFIVVKNAV 199
>gi|56961933|ref|YP_173655.1| 50S ribosomal protein L4 [Bacillus clausii KSM-K16]
gi|81601105|sp|Q5WLR1.1|RL4_BACSK RecName: Full=50S ribosomal protein L4
gi|56908167|dbj|BAD62694.1| 50S ribosomal protein L4 [Bacillus clausii KSM-K16]
Length = 207
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + TG ++GE L + +V+H A++ + R+GT T R EVRGGGRK
Sbjct: 4 VSLFNQTGSQVGEIELADNVFGVEPNESVLHDAVVMQQASLRQGTHKTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A++S
Sbjct: 64 PWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKDSEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+++ K E KTK + + +D KA + + +ENV S+RN+ + LT
Sbjct: 124 VVLDDL--KLEAIKTKAMKDVLASLSVD--SKALVVTADYNENVALSARNLPGITFLTAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + LV+T V+
Sbjct: 180 GVNVLDLLKHDKLVITKDAVE 200
>gi|260589278|ref|ZP_05855191.1| ribosomal protein L4/L1 family protein [Blautia hansenii DSM 20583]
gi|331082684|ref|ZP_08331807.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540359|gb|EEX20928.1| ribosomal protein L4/L1 family protein [Blautia hansenii DSM 20583]
gi|330400303|gb|EGG79945.1| 50S ribosomal protein L4 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 206
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 5/199 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+++G L+ + +VH A++ + N R+GT TR EV GGGRK
Sbjct: 4 VSVYNMEGKEVGTMELNDAVFGVEINDHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R+P GGGVVF P PRD+S+K+NKKE+R A+ + + S
Sbjct: 64 PWRQKGTGHARQGSTRSPQWAGGGVVFAPTPRDYSLKMNKKERRAALKSVLTSRVQENKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E K + KTK + + KA ++ + NV S+RNI + P
Sbjct: 124 IVLDEL--KLDEVKTKAMQNVLNNLNVS---KALVVLADNDANVVLSTRNIPDVVTALPN 178
Query: 234 TLNLFDILDAETLVLTPST 252
T+N++D+L T++LT ++
Sbjct: 179 TINVYDVLKYNTVILTKAS 197
>gi|269122980|ref|YP_003305557.1| 50S ribosomal protein L4 [Streptobacillus moniliformis DSM 12112]
gi|268314306|gb|ACZ00680.1| ribosomal protein L4/L1e [Streptobacillus moniliformis DSM 12112]
Length = 214
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 7/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + GE+ G T + + + + V+H L ++ R GTAST TRGEV GGGRK
Sbjct: 6 LKVYNLNGEEKGVTTVSSEIFGLEPNKYVMHEVLTAELAASRAGTASTKTRGEVSGGGRK 65
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GPKPR++ K+NKK ++LA+ +A+A +
Sbjct: 66 PFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRNYDKKVNKKVRKLALKSALAVRIQNGDV 125
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKM 229
IV+E++ + PKTK F+ + + + K F+V + E N+ S RNI ++
Sbjct: 126 IVLEDY--MLDTPKTKAFVNFTEKVNM-VEDKKLFIVNDYLEDADWNLYLSVRNIEKTEI 182
Query: 230 LTPRTLNLFDILDAETLVLT 249
L PR L+++ +L +V+T
Sbjct: 183 LDPRELSVYALLKFNKVVIT 202
>gi|205372068|ref|ZP_03224885.1| 50S ribosomal protein L4 [Bacillus coahuilensis m4-4]
Length = 207
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L+ TG ++G+ L+ + ++V+ A+I + R+G R EV GGGRKP+
Sbjct: 6 LLNQTGSQVGDIELNDSIFGIEPNQSVMFDAVIMQRASLRQGNHKVKGRSEVAGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI +A+++ EN IV
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSALSTKVVEENIIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ F PKTKEF+ ++ LD K + + ENV S+RNI + ++ +
Sbjct: 126 LDQL--TFAAPKTKEFVAVLKNLSLD--NKVLVVTDGLDENVALSARNIPGVTVVPSNGI 181
Query: 236 NLFDILDAETLVLTPSTVD 254
++ D+L + LV+T + V+
Sbjct: 182 SVLDVLGHDKLVMTKAAVE 200
>gi|23097575|ref|NP_691041.1| 50S ribosomal protein L4 [Oceanobacillus iheyensis HTE831]
gi|46577267|sp|Q8ETY1.1|RL4_OCEIH RecName: Full=50S ribosomal protein L4
gi|22775798|dbj|BAC12076.1| 50S ribosomal protein L4 [Oceanobacillus iheyensis HTE831]
Length = 207
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G +G+ L+ + V+H A++ + R+GT + R EVRGGGRK
Sbjct: 4 VALLKQDGSNVGDIELNDSVFGIEPNTHVLHEAVVMQRASLRQGTHAVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLA+ +A++S E+
Sbjct: 64 PWRQKGTGRARQGSTRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLALRSALSSKVNEESL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E + PKTKE + ++ GL KA ++ E E V +S+ N+ + +LT
Sbjct: 124 LVLENIS--IDAPKTKEIVNILK--GLQVDAKALIVLSEKDETVIRSANNLQNVTVLTVE 179
Query: 234 TLNLFDILDAETLVLT 249
LN+ D+L + L++T
Sbjct: 180 ELNILDLLMHDKLIIT 195
>gi|410668886|ref|YP_006921257.1| 50S ribosomal protein L4 [Thermacetogenium phaeum DSM 12270]
gi|409106633|gb|AFV12758.1| 50S ribosomal protein L4 [Thermacetogenium phaeum DSM 12270]
Length = 209
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G +IGE L V+H+A++ + N+R GTA+T TRGEV+G GRKP+ QK T
Sbjct: 11 GVRIGEVELRDDVFGVPVNEHVLHQAVVRHLANRRAGTAATKTRGEVQGTGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR GS R+PL GGG+VFGP+PR + + +K +RLA+ +A+++ A IV+E D
Sbjct: 71 GRARVGSIRSPLWRGGGIVFGPQPRSYRQAMPRKMRRLALKSALSARANEGAMIVIE--D 128
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ PKTKE I+ ++ LD A + VE+++RNI +++ LN +D+
Sbjct: 129 IQLPEPKTKEAIKLLQ--SLDAVSNALIVTGREMPLVERATRNIPGVRLTMAERLNTYDV 186
Query: 241 LDAETLVLTPSTVD 254
L A+ LVLT +D
Sbjct: 187 LLADKLVLTREALD 200
>gi|384136730|ref|YP_005519444.1| 50S ribosomal protein L4 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290815|gb|AEJ44925.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 203
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G+++GE L+ K ++H ++ + +RRGT T TR EV GGGRK
Sbjct: 1 MAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 60
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GP PR ++ K+ KK +R A+ +A++S
Sbjct: 61 PWRQKGTGRARQGSIRAPQWRGGGVVHGPVPRSYAFKVPKKVRRAALYSALSSKVQEGKI 120
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VVE + FERPKTK+ + +R ++ KA + E + V S+RNI +K +
Sbjct: 121 VVVEGLE--FERPKTKDMVGVLRNLNVE---KALIVDGEKKQPVYLSARNIPNVKYMEAA 175
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN++++L + LVLT V
Sbjct: 176 GLNVYELLRHDHLVLTKDAVQ 196
>gi|114567840|ref|YP_754994.1| 50S ribosomal protein L4/L1e [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122317285|sp|Q0AUI1.1|RL4_SYNWW RecName: Full=50S ribosomal protein L4
gi|114338775|gb|ABI69623.1| LSU ribosomal protein L4P [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 207
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ +G ++GE L+ +AV+ + + NKR GTAS+ TR EVRGGG+KP+
Sbjct: 6 LYDMSGAQVGEIELNDSVFGIKPNQAVMFDFVKMQLANKRAGTASSKTRAEVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS+R P+ GGV FGP+PRD+S ++ +K +RLA+ +A++S N +V
Sbjct: 66 RQKGTGRARVGSSRNPVWTKGGVAFGPRPRDFSYRLPRKVRRLAMKSALSSKVLDNNIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLTPRT 234
++ F+ PKT+ ++ ++ P K T +V + NV KS+RNI +K L
Sbjct: 126 LDSL--TFDEPKTRLMVQTLKSL---PVGKKTLVVTAYGDPNVIKSARNIPGVKPLRADF 180
Query: 235 LNLFDILDAETLVLTPSTV 253
+N++D+L+ +TL++T V
Sbjct: 181 INVYDLLNYDTLLITREAV 199
>gi|335427953|ref|ZP_08554873.1| 50S ribosomal protein L4 [Haloplasma contractile SSD-17B]
gi|334893879|gb|EGM32088.1| 50S ribosomal protein L4 [Haloplasma contractile SSD-17B]
Length = 207
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++G+ L + + + V++ A+I + R+GT T TR EVRGGGRK
Sbjct: 4 VALFNQSGTQVGDIQLAEEVFGIEPNQQVLYDAVIMQRASLRQGTHKTKTRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S ++NKK +RLA+ +A+++ ++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYRLNKKVRRLALRSALSTKVNEDSV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ FE PKT+E ++ ++ L +K + E + NV S+RNI L
Sbjct: 124 VVLDSLT--FESPKTQEMVQVLK--NLVSNEKTLIVTGEENVNVMLSARNIPNAITLPAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ DIL+ LV+T V
Sbjct: 180 KINVLDILNYNKLVMTQDAV 199
>gi|299143193|ref|ZP_07036273.1| ribosomal protein L4/L1 family protein [Peptoniphilus sp. oral
taxon 386 str. F0131]
gi|298517678|gb|EFI41417.1| ribosomal protein L4/L1 family protein [Peptoniphilus sp. oral
taxon 386 str. F0131]
Length = 207
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ G + E L+ D V+ + + N+R+GT S TR EVRGGGRK
Sbjct: 4 IQVVNMEGAAVSEIELNENIFDIDINEHAVYLVVKNILANRRQGTKSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VF PKPRD+S KK +RLA+ +A+ S
Sbjct: 64 PWKQKGTGRARQGSIRSPQWRGGGIVFAPKPRDFSYTTPKKVRRLALRSALTSKVRENEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ D K KTK F++ ++ DP KA +V E V+ ++RNI +K
Sbjct: 124 IVVD--DIKMNDAKTKNFVQMLKAIKADP--KALVVVAGYDEKVKIAARNIPNVKTTMAE 179
Query: 234 TLNLFDILDAETLVLT 249
+N++DIL +LV+T
Sbjct: 180 NINVYDILKYNSLVIT 195
>gi|333896189|ref|YP_004470063.1| 50S ribosomal protein L4 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111454|gb|AEF16391.1| ribosomal protein L4/L1e [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 206
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 121/201 (60%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + E+IGE L + V+H A++ + N+R+GT ST RGEVRGGG K
Sbjct: 4 VAVYNINAEQIGEIELSDNVFGVEVNVPVMHEAVLNYLANQRQGTHSTKRRGEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVFGPKPRD+S I KK KRLA+ +A+ S+ +N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVKGGVVFGPKPRDYSYNIPKKVKRLALKSAL-SSKVRDNE 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I+V + E PKTK+ E ++++ + + A ++ + ENV SSRNI +K +
Sbjct: 123 IIVIDDINIDE-PKTKKIAEMLKKFDV---KNALIVIPDGKENVILSSRNIPNVKAVFAN 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+LN +D+L + ++T V+
Sbjct: 179 SLNTYDVLKYDRFIITKDAVN 199
>gi|375087899|ref|ZP_09734244.1| 50S ribosomal protein L4 [Dolosigranulum pigrum ATCC 51524]
gi|374563609|gb|EHR34921.1| 50S ribosomal protein L4 [Dolosigranulum pigrum ATCC 51524]
Length = 207
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 123/199 (61%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+ GE L+ + V+ A+I ++R+GT + R VRGGGRKP+
Sbjct: 6 VFNQQGDANGEVSLNNDIFGIEPNENVLFDAIIMQRASQRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSN +P+ GGGV+FGP PR +S K+ KK +RLAI +A++ A + IV
Sbjct: 66 RQKGTGRARHGSNTSPIWRGGGVIFGPTPRSYSYKLPKKVRRLAILSALSQKALDDEIIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++E + F++PKTK+F + G++ +KA ++ + +E + S+RNI +K++ P +
Sbjct: 126 IDELN--FDQPKTKDFQHMLDHIGVE--RKALVVLEKENEFAKLSARNIEGVKVVAPDNV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
++ D++ + L+LT + ++
Sbjct: 182 SVLDVVAHDDLILTKTALE 200
>gi|335040796|ref|ZP_08533918.1| ribosomal protein L4/L1e [Caldalkalibacillus thermarum TA2.A1]
gi|334179371|gb|EGL82014.1| ribosomal protein L4/L1e [Caldalkalibacillus thermarum TA2.A1]
Length = 207
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G +GE L + + V+H A++ + R GT +T R VRGGGRKP+ QK T
Sbjct: 11 GSIVGEIELADSVFGIEPNQYVLHDAVVMQRASMRAGTHATKNRAAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR GS R P GGGVVFGP PR + K+ KK +RLAI +A++S + V+++
Sbjct: 71 GRARHGSIRAPQWVGGGVVFGPTPRKYGYKLPKKVRRLAIKSALSSKVKNDEIKVLDQL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E+PKTKE + ++ LD +KA + +NV SSRNI + +T +N+ D+
Sbjct: 130 -TLEKPKTKEMVNILK--NLDVNRKALIVTDNYDDNVALSSRNIPGVTFVTAEGINVLDV 186
Query: 241 LDAETLVLTPSTV 253
L +TL++T V
Sbjct: 187 LAHDTLIITKDAV 199
>gi|302876533|ref|YP_003845166.1| 50S ribosomal protein L4 [Clostridium cellulovorans 743B]
gi|307687206|ref|ZP_07629652.1| 50S ribosomal protein L4 [Clostridium cellulovorans 743B]
gi|302579390|gb|ADL53402.1| ribosomal protein L4/L1e [Clostridium cellulovorans 743B]
Length = 206
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 116/201 (57%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+ +G+ L+ A + A VH+ ++ + NKR+GT S TR EV GGG KP+ QK T
Sbjct: 11 GQNVGDIQLNDNVFAAKISEAAVHQVVVALLANKRQGTQSAKTRAEVSGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GG+VF PKPRD+ + I K KR A+ + + S +V+E
Sbjct: 71 GRARQGSIRSPQWIHGGIVFAPKPRDYRVSIPKSMKRTAMKSVLTSKVNDNELVVLESL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTKE + ++ + + +KA +V E +ENV KS RN+ ++++ +N++D+
Sbjct: 130 -AFDAPKTKEAVAMLKAFEV---KKALVVVAESNENVYKSIRNVEGVEVIPVNNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L +++T V + Y
Sbjct: 186 LKYPKVLITKDAVSKIEEVYA 206
>gi|301059224|ref|ZP_07200161.1| 50S ribosomal protein L4 [delta proteobacterium NaphS2]
gi|300446659|gb|EFK10487.1| 50S ribosomal protein L4 [delta proteobacterium NaphS2]
Length = 207
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + EK+ E L+ + + V+H+ ++ + R GTA++ R V+G G K
Sbjct: 4 LDVYNLQKEKVSEVELNKDVFSVPIKKHVLHQVVVAQLAGHRTGTAASKNRAAVKGSGAK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
+ QK TGRAR G +P R GGGV FGP PR + KI KK ++ A+ A+ E
Sbjct: 64 LWRQKGTGRARVGKASSPTRKGGGVAFGPSPRSYDQKIPKKVRKSALRMALTDKVQCEQL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+++F KTK F+EAM ++ + QKA + E SEN+EKSS+N+ +K++
Sbjct: 124 FVIDDFT--LPEIKTKHFVEAMNQFDV---QKALIVTNEKSENLEKSSKNVPKIKVMRSE 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN++DIL +TL L VD
Sbjct: 179 GLNVYDILKHDTLFLERMAVD 199
>gi|258512669|ref|YP_003186103.1| 50S ribosomal protein L4 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479395|gb|ACV59714.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 206
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G+++GE L+ K ++H ++ + +RRGT T TR EV GGGRK
Sbjct: 4 VAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GP PR ++ K+ KK +R A+ +A++S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGVVHGPVPRSYAFKVPKKVRRAALYSALSSKVQEGKI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VVE + FERPKTK+ + +R ++ KA + E + V S+RNI +K +
Sbjct: 124 VVVEGLE--FERPKTKDMVGVLRNLNVE---KALIIDGEKKQPVYLSARNIPNVKYMEAA 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN++++L + LVLT V
Sbjct: 179 GLNVYELLRHDHLVLTKDAVQ 199
>gi|288554726|ref|YP_003426661.1| 50S ribosomal protein L4 [Bacillus pseudofirmus OF4]
gi|288545886|gb|ADC49769.1| 50S ribosomal protein L4 [Bacillus pseudofirmus OF4]
Length = 207
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G+ L + ++V+H A++ + R+GT T R EVRGGGRK
Sbjct: 4 VAVFNQAGSQVGDIELSDSIFGIEPNQSVLHDAVVMQQASLRQGTHKTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A++S A
Sbjct: 64 PWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKLKAAEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ + + PKTK+ + GL KA + + +E V S+RN+ + +T
Sbjct: 124 VVLDNL--QLDAPKTKDMANVLN--GLSVDSKALVVTADYNETVALSTRNLPGVTFVTAE 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D+L + LV+T V
Sbjct: 180 GVNVLDVLKHDKLVITKDAV 199
>gi|357012814|ref|ZP_09077813.1| 50S ribosomal protein L4 [Paenibacillus elgii B69]
Length = 207
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + V++ A++ + R GT T R EVRGGGRK
Sbjct: 4 VAVFNVSGAQVGEVELADSVFGIEPHVHVLNEAVLMQRASLRAGTHKTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR ++ K+ KK +RLAI +A++S A
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGIVFGPTPRSYAYKLPKKVRRLAIKSALSSKVKASEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + +PKTKEF + +D +KA + ENV S+RNI +K +
Sbjct: 124 IVLDQL--QLAQPKTKEFAAILNNLKVD--RKALVVTAAYDENVALSARNIPGVKFVAAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D++ + L++T V
Sbjct: 180 GINVLDVMVYDKLIITKDAVQ 200
>gi|218290004|ref|ZP_03494181.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius LAA1]
gi|218239989|gb|EED07176.1| ribosomal protein L4/L1e [Alicyclobacillus acidocaldarius LAA1]
Length = 206
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G+++GE L+ K ++H ++ + +RRGT T TR EV GGGRK
Sbjct: 4 VAVLNTAGQQVGEIELNEKIFGAPIRPDLMHIVVLQYLAARRRGTHKTKTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVV GP PR ++ K+ KK +R A+ +A++S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGVVHGPVPRSYAFKVPKKVRRAALYSALSSKVQEGKI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VVE + FERPKTK+ + +R ++ KA + E + V S+RNI +K +
Sbjct: 124 VVVEGLE--FERPKTKDMVGVLRNLNVE---KALIVDGEKKQPVYLSARNIPNVKYMEAA 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN++++L + LVLT V
Sbjct: 179 GLNVYELLRHDHLVLTKDAVQ 199
>gi|166031658|ref|ZP_02234487.1| hypothetical protein DORFOR_01358 [Dorea formicigenerans ATCC
27755]
gi|346307825|ref|ZP_08849955.1| 50S ribosomal protein L4 [Dorea formicigenerans 4_6_53AFAA]
gi|166028635|gb|EDR47392.1| 50S ribosomal protein L4 [Dorea formicigenerans ATCC 27755]
gi|345904783|gb|EGX74527.1| 50S ribosomal protein L4 [Dorea formicigenerans 4_6_53AFAA]
Length = 206
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 5/179 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VH A++ + N R+GT TR EV GGGRKP+ QK TG AR+GS R P GGGVVF
Sbjct: 32 LVHMAVVNQLANNRQGTQKAKTRSEVSGGGRKPWRQKGTGHARQGSTRAPQWTGGGVVFA 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PRD+S K+NKKEKR A+ +A+ S IVV+ F+ KTK A++ +
Sbjct: 92 PVPRDYSFKMNKKEKRAALKSALTSRVEENKFIVVDSLT--FDEIKTKNVANALKNLNVS 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
KA ++ + + N E S++NI +K T+N++D++ T++ T + V + Y
Sbjct: 150 ---KALVVLEDGNVNAELSAKNIAGVKTAKTNTINVYDVMKYNTVIATKAAVKAIEEVY 205
>gi|118579120|ref|YP_900370.1| 50S ribosomal protein L4 [Pelobacter propionicus DSM 2379]
gi|166199839|sp|A1ALU2.1|RL4_PELPD RecName: Full=50S ribosomal protein L4
gi|118501830|gb|ABK98312.1| LSU ribosomal protein L4P [Pelobacter propionicus DSM 2379]
Length = 207
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 114/205 (55%), Gaps = 5/205 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +++GE L D ++H AL + N+R GT T TR EV G G+K
Sbjct: 4 IAVYNMNRQQVGELQLADDVFNADVKEHLMHLALRIQLANRRAGTVKTKTRSEVAGSGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+G R P PGGGV FGP+P+++ + +NKK ++ AI +A++
Sbjct: 64 PFKQKGTGNARQGCVRAPQYPGGGVAFGPQPKEYHLSMNKKARKSAICSALSLQCKNNRI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+++ D F TK F++ M+R+ ++ ++ + + S N++ S RN+ +K+L
Sbjct: 124 TVMDKLD--FSSISTKAFVDFMKRFEIE---RSLIITDDFSNNLQLSCRNVPHVKLLKHD 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNG 258
LN+ DIL + ++ T V + G
Sbjct: 179 ALNIHDILKYKNIIFTQGAVQSVEG 203
>gi|320352918|ref|YP_004194257.1| 50S ribosomal protein L4P [Desulfobulbus propionicus DSM 2032]
gi|320121420|gb|ADW16966.1| LSU ribosomal protein L4P [Desulfobulbus propionicus DSM 2032]
Length = 207
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 111/198 (56%), Gaps = 5/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
I + EK+GE L+ + ++H + N+R G A T TRGEV GGG KP+
Sbjct: 6 IYNTRAEKVGEIDLNESLFNLEVNTGILHEVVCMQRANRRSGNACTKTRGEVSGGGAKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS +P+ GGG VFGPKPRD+S + KK KRLA+ A+++ N ++
Sbjct: 66 RQKGTGRARSGSRTSPVWRGGGTVFGPKPRDYSYSMPKKVKRLALKMAMSARCQEGNIVI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V++FD KTKEF++ M + + + E +N+ S+RN K+L L
Sbjct: 126 VDQFD--LPAVKTKEFLKVMTNFQF---ENCLVVTAESEDNLGLSARNAVGFKVLPVAGL 180
Query: 236 NLFDILDAETLVLTPSTV 253
N++DIL L++ S++
Sbjct: 181 NVYDILKHSKLMILQSSL 198
>gi|384108302|ref|ZP_10009197.1| 50S ribosomal protein L4, bacterial/organelle [Treponema sp. JC4]
gi|383870769|gb|EID86370.1| 50S ribosomal protein L4, bacterial/organelle [Treponema sp. JC4]
Length = 212
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S +G+++ LD K V++ A+ ++ NKR GTA T TR EV G KPY
Sbjct: 5 VYSTSGKELRTITLDDKVFGLPVNDDVIYYAITNELANKRVGTACTKTRAEVHGSNAKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
+QK TG ARRG ++P+ GGG +FGPKPRD+S I KKEKRLA+ T ++S A + +
Sbjct: 65 NQKGTGNARRGDKKSPITVGGGTIFGPKPRDFSYSIPKKEKRLAMKTILSSHAQGDRLTI 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F E KTK+ + ++ + D ++ ++ + V++++RNI L L+ L
Sbjct: 125 VEDF--TVESGKTKDLVAILKNFAKD--ERTVLILKDDDAKVKQAARNIKNLTFLSYNRL 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYGVEFEG 266
N D+ ++ S V L+ Y + E
Sbjct: 181 NAHDLFYGRKIIALESAVKNLSDFYADDKEA 211
>gi|254303419|ref|ZP_04970777.1| ribosomal protein L4 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323611|gb|EDK88861.1| ribosomal protein L4 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 209
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 119/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + G++ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNVYNLAGDQTGTLEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ ++D E PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYD-VIETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|15896382|ref|NP_349731.1| 50S ribosomal protein L4 [Clostridium acetobutylicum ATCC 824]
gi|337738339|ref|YP_004637786.1| 50S ribosomal protein L4 [Clostridium acetobutylicum DSM 1731]
gi|384459849|ref|YP_005672269.1| 50S ribosomal protein L4 [Clostridium acetobutylicum EA 2018]
gi|46577285|sp|Q97EH9.1|RL4_CLOAB RecName: Full=50S ribosomal protein L4
gi|15026198|gb|AAK81071.1|AE007808_24 Ribosomal protein L4 [Clostridium acetobutylicum ATCC 824]
gi|325510538|gb|ADZ22174.1| 50S ribosomal protein L4 [Clostridium acetobutylicum EA 2018]
gi|336292263|gb|AEI33397.1| 50S ribosomal protein L4 [Clostridium acetobutylicum DSM 1731]
Length = 206
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+ + L K + + +H+ ++ + NKR+GT S TR EV GGG KP+ QK T
Sbjct: 11 GKKVEDIELSEKVFGAKISESALHQVVVAQLANKRQGTQSAKTRTEVSGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ I I K +R A+ +A+ S + IV++E
Sbjct: 71 GRARQGSIRAPQWIHGGVVFAPKPRDYRISIPKSMRRTAMLSALTSKVNDKEMIVLDEL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
K + PKTKE ++ + + +KA +V E +NV KS RNI ++ LN++DI
Sbjct: 130 -KIDAPKTKEIVKMLNAF---EAKKALIVVAESDQNVYKSVRNIQGAAVIPANNLNVYDI 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L + ++T V + Y
Sbjct: 186 LKYDKFIVTKEAVSKIEEVYA 206
>gi|406978123|gb|EKE00145.1| hypothetical protein ACD_22C00084G0003 [uncultured bacterium]
Length = 210
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 108/169 (63%), Gaps = 5/169 (2%)
Query: 93 NKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKIN 152
N+R+GT+ST TRGEV GGG KP+ QK TGRAR GS+R P+ GG+ GPKP+DWS+K+
Sbjct: 43 NQRQGTSSTKTRGEVSGGGIKPWKQKGTGRARVGSSRNPIWRHGGISHGPKPKDWSLKLP 102
Query: 153 KKEKRLAISTAIASAAAAENTI-VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM 211
K+ KRLAI +A++ A EN + V+++ + + PKTK E +++ LD K ++
Sbjct: 103 KQVKRLAILSALSMVATTENKMKVLDKLE--LKTPKTKTICEMLKK--LDLGYKTLIVLG 158
Query: 212 EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
V+ENV KS RNI + + +LN +++++A ++ V L +Y
Sbjct: 159 SVNENVMKSIRNIENVSFVNADSLNAYEVMNARKVLFLKDAVKSLEKKY 207
>gi|251799641|ref|YP_003014372.1| 50S ribosomal protein L4 [Paenibacillus sp. JDR-2]
gi|247547267|gb|ACT04286.1| ribosomal protein L4/L1e [Paenibacillus sp. JDR-2]
Length = 207
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + +G ++GE L + V+H A++ +R GT T R EVRGGGRKP+
Sbjct: 6 VFNVSGSEVGEIELADSVFGIEPNSHVLHSAVLLQQAAERAGTHKTKGRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR + K+ KK +RLAI +A++S A +V
Sbjct: 66 KQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYGFKLPKKVRRLAIKSALSSKVIANEIVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ F PKTKEF + L +KA ++ +NV S+RNI +K + +
Sbjct: 126 LDQLT--FAAPKTKEFAAILNN--LKADRKALVVLPAYDDNVALSARNIPGVKFVAADGI 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + L++T V+
Sbjct: 182 NVLDVLVHDKLIITKEAVE 200
>gi|310829584|ref|YP_003961941.1| 50S ribosomal protein L4 [Eubacterium limosum KIST612]
gi|308741318|gb|ADO38978.1| ribosomal protein L4/L1e [Eubacterium limosum KIST612]
Length = 206
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL G +G+ L + + VVH ++ + NKR+GT TLTR EVRGGGRK
Sbjct: 4 MDILDVKGNVVGDVELSERVFGIEPNEPVVHEVVVALLANKRQGTKGTLTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR G++R+PL GGGV+F PK RD+S K+NKK + LA+ + ++ A
Sbjct: 64 PWRQKGTGRARAGTSRSPLWIGGGVIFAPKSRDYSKKVNKKVRNLAMRSVFSAKAQDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+++ + PKTKE + + KA + E + V +S+ NI + T
Sbjct: 124 RVLDQL--TMDAPKTKEMVGILSAIN---APKALIVTAEKDDAVVRSANNIQKVATTTVS 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
LN++D+L + LV+T ++ + Y
Sbjct: 179 ELNVYDMLKYDVLVMTKDALEKIEEVY 205
>gi|262066303|ref|ZP_06025915.1| ribosomal protein L4/L1 family protein [Fusobacterium periodonticum
ATCC 33693]
gi|294783641|ref|ZP_06748965.1| ribosomal protein L4 [Fusobacterium sp. 1_1_41FAA]
gi|291379998|gb|EFE87516.1| ribosomal protein L4/L1 family protein [Fusobacterium periodonticum
ATCC 33693]
gi|294480519|gb|EFG28296.1| ribosomal protein L4 [Fusobacterium sp. 1_1_41FAA]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + G++ G ++ + + V+H L ++ R+GTAST TR VRGGGRK
Sbjct: 4 LNVYNLAGDQTGTLEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + LA+ +A+++ AA N
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLT 231
+V+ +++G + PKTK + + + +D KQK F+V ++ + N+ S+RN+ +L
Sbjct: 124 LVL-DYEG-IDTPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQ 179
Query: 232 PRTLNLFDILDAETLVLT 249
P + ++ +L E ++LT
Sbjct: 180 PNEIGVYWLLKQEKVILT 197
>gi|397689218|ref|YP_006526472.1| 50S ribosomal protein L4 [Melioribacter roseus P3M]
gi|395810710|gb|AFN73459.1| Ribosomal protein L4 [Melioribacter roseus P3M]
Length = 208
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 6/197 (3%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
+GE+I E D+ P+ V++ A+ + N+R+GT + EVRGGGRKP+ QK
Sbjct: 13 SGEQI-ELSKDIFEIEPNDH--VLYLAVKAYLANQRQGTHKAKEKSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
G AR GS R+PL GGG +FGPKPR++ K+NKK +LA +A++ + A IVVE+F
Sbjct: 70 RGGARAGSIRSPLWVGGGRIFGPKPRNYRQKLNKKVVQLARKSALSYKSKANQIIVVEDF 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
D FE+P+TK+F+E ++ L K K L +NV KS RNI + ++ ++++
Sbjct: 130 D--FEQPQTKKFVEVLKALNLSGK-KTLLLTNGTLKNVYKSGRNIDRVSIVEANKASVYE 186
Query: 240 ILDAETLVLTPSTVDFL 256
+L+ + L+L S V L
Sbjct: 187 LLNNQVLMLQKSAVQLL 203
>gi|340621221|ref|YP_004739672.1| 50S ribosomal protein L4 [Capnocytophaga canimorsus Cc5]
gi|339901486|gb|AEK22565.1| 50S ribosomal protein L4 [Capnocytophaga canimorsus Cc5]
Length = 209
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FGP+P+D++ K
Sbjct: 41 LANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A++ A + +V+E+F+ F+ PKTKEF+ ++ GL+ K K+ F++
Sbjct: 101 LNKNVKRLARRSALSLKAKEQAVVVLEDFN--FDTPKTKEFVSVLKALGLENK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+++ NV SSRN+ ++T LN +DI++A +VL S+VD +
Sbjct: 158 ADINNNVYLSSRNLKNTNVVTASELNTYDIMNASGVVLLESSVDVV 203
>gi|291460719|ref|ZP_06600109.1| ribosomal protein L4/L1 family protein [Oribacterium sp. oral taxon
078 str. F0262]
gi|291416678|gb|EFE90397.1| ribosomal protein L4/L1 family protein [Oribacterium sp. oral taxon
078 str. F0262]
Length = 206
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 124/212 (58%), Gaps = 13/212 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + G+++G+ L+ A ++H A++ + N+R+GT LTR EV GGGRK
Sbjct: 4 VSVFDMQGKEVGKMELNDAVFAAPINEHLLHLAVVAQLANRRQGTKKALTRAEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+ +NKKEKR A+ A+++A A +
Sbjct: 64 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYRKDLNKKEKRAALKAALSNAVADQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDP-KQKATFLVMEVSENVEK---SSRNIGTLKM 229
+VV+ F+ KTK+F +AM LD K K F++++ +N EK S+RNI +K
Sbjct: 124 VVVDSI--HFDEIKTKKF-QAM----LDALKLKKAFVLLD--QNDEKTILSARNIEDVKT 174
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++D++ T++ T + ++ L Y
Sbjct: 175 AQVNEINVYDVMKYGTVLATKAALEKLEEVYA 206
>gi|386712467|ref|YP_006178789.1| 50S ribosomal protein L4 [Halobacillus halophilus DSM 2266]
gi|384072022|emb|CCG43512.1| 50S ribosomal protein L4 [Halobacillus halophilus DSM 2266]
Length = 207
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ +G +G+ L+ + V+H ++ N R+GT R EV GGGRK
Sbjct: 4 VALLNQSGSNVGDVELNDAVFGIEPNTHVLHETVLMQRANLRQGTHKVKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR +S + KK +RLA+ +A +S EN
Sbjct: 64 PWRQKGTGRARQGSIRAPQWVGGGAVFGPSPRSYSYTMPKKVRRLALQSAYSSKVKEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E + PKTKE + ++ LD +KA + E ENV SS NI T+K +
Sbjct: 124 IVLESLS--LDAPKTKEVVSLLK--ALDVNEKALIVTAEKDENVTLSSNNIPTVKSSSVE 179
Query: 234 TLNLFDILDAETLVLT 249
+++ D+L + L+LT
Sbjct: 180 EVSVLDLLTHDKLILT 195
>gi|381181875|ref|ZP_09890703.1| 50S ribosomal protein L4 [Listeriaceae bacterium TTU M1-001]
gi|380318250|gb|EIA21541.1| 50S ribosomal protein L4 [Listeriaceae bacterium TTU M1-001]
Length = 207
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G K GE L+ + VV +++ + R+GT R EVRGGGRK
Sbjct: 4 LSLLKQDGSKAGEITLNDAVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLAI + ++S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVQDENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTK+F ++ +D KA +V S+NVE S+RNI + ++
Sbjct: 124 VVLENL--AFDAPKTKDFAAFLKNISVD--SKALIVVASESDNVELSARNIQGITVIPAE 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
++++ ++ + L++T + V
Sbjct: 180 SISVLEVASHDKLIVTKAAV 199
>gi|289523368|ref|ZP_06440222.1| ribosomal protein L4/L1 family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503060|gb|EFD24224.1| ribosomal protein L4/L1 family protein [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 208
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 4/205 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G+K+GE L A +H+ ++ + +R+GT ST TRGEVRGGGRKP+
Sbjct: 6 VIGIDGQKVGEVALADDVFAARIHVPAMHQVVVAYLAAQRQGTHSTKTRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R+PL GGVV GPKPR + K+NKK K+LAI +A++ I+
Sbjct: 66 RQKHTGRARHGSIRSPLWIKGGVVHGPKPRSYDQKVNKKVKQLAIKSALSLKVKENKLIL 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE + PKTK+ + + K ++ E ++ ++RNI ++L ++
Sbjct: 126 VEGIE--TMSPKTKDMCAFLA--NAQAQAKPLIVIHESLPSIYMAARNIPGTRVLHVDSI 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRY 260
N+++IL+ E L+LT L Y
Sbjct: 182 NVYEILNHEHLILTKGAAQRLEEVY 206
>gi|452994642|emb|CCQ93749.1| ribosomal protein L4 [Clostridium ultunense Esp]
Length = 207
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+ +GE L + + V+H+A++ + R+GT +T R VRGGG+KP+
Sbjct: 6 VYNQNGQTVGEMDLKDEVFGIEPNPHVLHQAVVLYQASLRQGTHATRNRALVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGGVVFGP PR ++ + KK +RLAI +A +S +V
Sbjct: 66 RQKGTGRARQGSIRAPQWVGGGVVFGPTPRSYTFTMPKKMRRLAIRSAFSSKVKENELLV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ E+PKTKEF++ ++ L+ +KA ++ E +E + S+RNI +K++ +
Sbjct: 126 LDTLS--LEKPKTKEFVQILK--NLNVNRKALVIIGEKNETLSLSARNIPGVKLVPATGV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N++D+L+ + +V+T V+
Sbjct: 182 NVYDLLNVDRVVMTKDAVN 200
>gi|334139102|ref|ZP_08512499.1| 50S ribosomal protein L4 [Paenibacillus sp. HGF7]
gi|333603067|gb|EGL14490.1| 50S ribosomal protein L4 [Paenibacillus sp. HGF7]
Length = 208
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + +H A++ + R+GT R EVRGGGRK
Sbjct: 4 VALYNVSGTQVGEVELSDVVFGIEPHVHALHEAVLLQQASVRQGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVFGP PR + K+ KK +RLAI +A++S +
Sbjct: 64 PWKQKGTGRARQGSIRAPQWKGGGVVFGPTPRSYGYKLPKKVRRLAIKSALSSKVIDNDI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + PKTKEF+ ++ L+ ++KA + +NV S+RNI +K +
Sbjct: 124 IVLDQL--QMNAPKTKEFVAILKN--LNVERKALVVAASYEDNVALSARNIPGVKFVVAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D++ + L++T V
Sbjct: 180 GINVLDVMVHDKLIITKDAV 199
>gi|404372642|ref|ZP_10977937.1| 50S ribosomal protein L4 [Clostridium sp. 7_2_43FAA]
gi|226911220|gb|EEH96421.1| 50S ribosomal protein L4 [Clostridium sp. 7_2_43FAA]
Length = 206
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 116/201 (57%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G+ L+ + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GKQVGDIQLNDNVFGVEVNTDAMHQVVVALLANKRQGTQSAKTRAEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF PKPRD+ + + K +R+A+ +A+ S +V+E
Sbjct: 71 GRARQGSIRAPQWIKGGIVFAPKPRDYRMSVPKSMRRVAMKSALTSKVQDGQMVVLETL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK+ +E ++ D K K + E +E + KS+RNI ++++ +N++D+
Sbjct: 130 -AFEAPKTKKMVEVLK--AFDAK-KTLIITGESNEVLYKSARNIADVQIMPVNNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKFEKLIITKDAVSKIEEVYA 206
>gi|375310806|ref|ZP_09776071.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Aloe-11]
gi|390456379|ref|ZP_10241907.1| 50S ribosomal protein L4 [Paenibacillus peoriae KCTC 3763]
gi|375077174|gb|EHS55417.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Aloe-11]
Length = 207
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ +G ++GE L+ + + V+H A++ + + R+GT R EVRGGGRK
Sbjct: 4 VALLNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ K+ KK +RLAI +A++S
Sbjct: 64 PWKQKGTGRARQGSIRAPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIENEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ PKTKEF + L +KA + +NV S+RNI +K +
Sbjct: 124 IVLDALT--LNGPKTKEFAAILNN--LKADRKALIVAPSYDDNVALSARNIPGVKFVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLGHDKLIITKEAV 199
>gi|379724669|ref|YP_005316800.1| 50S ribosomal protein L4 [Paenibacillus mucilaginosus 3016]
gi|386727421|ref|YP_006193747.1| 50S ribosomal protein L4 [Paenibacillus mucilaginosus K02]
gi|378573341|gb|AFC33651.1| 50S ribosomal protein L4 [Paenibacillus mucilaginosus 3016]
gi|384094546|gb|AFH65982.1| 50S ribosomal protein L4 [Paenibacillus mucilaginosus K02]
Length = 207
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + V++ A++ + R GT T R EVRGGGRK
Sbjct: 4 VAVFNVSGAQVGEVELAESVFGIEPHLHVLNEAVLMQRASLRAGTHKTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI +A++S +
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGIVFGPTPRSYSYKLPKKVRRLAIKSALSSKVKSSEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + PKTKEF + +D +KA + ENV S+RNI +K +
Sbjct: 124 IVLDQL--QMAAPKTKEFAAILNNLKVD--RKALVVTAAYEENVALSARNIPGVKFVVAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D++ + L++T V
Sbjct: 180 GINVLDVMVYDKLIITKDAVQ 200
>gi|253681900|ref|ZP_04862697.1| ribosomal protein, L4 [Clostridium botulinum D str. 1873]
gi|416350125|ref|ZP_11680767.1| 50S ribosomal protein L4 [Clostridium botulinum C str. Stockholm]
gi|253561612|gb|EES91064.1| ribosomal protein, L4 [Clostridium botulinum D str. 1873]
gi|338196362|gb|EGO88559.1| 50S ribosomal protein L4 [Clostridium botulinum C str. Stockholm]
Length = 206
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L A + V+H+ ++ + NKR+GT S TR EV GGG+KP+ QK T
Sbjct: 11 GQKVGDLQLAEAVFAVEVNADVLHQVVVAQLANKRQGTQSAKTRAEVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF PKPRD+ + I K KR+A+ +A+ S + +V+E +
Sbjct: 71 GRARQGSIRAPQWIHGGIVFAPKPRDYRMAIPKSMKRVAMKSALTSKVNDQELVVLENLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE ++ + + +K +V E +E V KS RNI ++ +N++DI
Sbjct: 131 --LEAPKTKEMVKMINAF---EAKKPLIVVAESNEVVYKSIRNIEGATVVPVNNINVYDI 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L + ++T V + Y
Sbjct: 186 LKHDKFIITKDAVAKIEEVYA 206
>gi|261409520|ref|YP_003245761.1| 50S ribosomal protein L4/L1e [Paenibacillus sp. Y412MC10]
gi|329922057|ref|ZP_08277850.1| 50S ribosomal protein L4 [Paenibacillus sp. HGF5]
gi|261285983|gb|ACX67954.1| ribosomal protein L4/L1e [Paenibacillus sp. Y412MC10]
gi|328942440|gb|EGG38704.1| 50S ribosomal protein L4 [Paenibacillus sp. HGF5]
Length = 207
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L+ + V+H A++ + RRGT R EVRGGGRK
Sbjct: 4 VALYNVSGSQVGEVELNEAVFGIEPNAHVLHSAVLLQRASLRRGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLAI +A++S
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGVVFGPTPRSYTFKLPKKVRRLAIKSALSSKVIDNAI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF + L +KA + +NV S+RNI +K +
Sbjct: 124 IVLDQLT--LNTPKTKEFANILSN--LKVGRKALIVAPSYDDNVALSARNIPGVKFVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLSYDQLIITKEAVQ 200
>gi|315649698|ref|ZP_07902782.1| ribosomal protein L4/L1e [Paenibacillus vortex V453]
gi|315274886|gb|EFU38262.1| ribosomal protein L4/L1e [Paenibacillus vortex V453]
Length = 207
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L+ + V+H A++ + RRGT R EVRGGGRK
Sbjct: 4 VALYNVSGSQVGEVELNEAVFGIEPNTHVLHSAVLLQRASLRRGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLAI +A++S
Sbjct: 64 PWKQKGTGRARQGSIRSPQWKGGGVVFGPTPRSYTFKLPKKVRRLAIKSALSSKVIDNAI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF + L +KA + +NV S+RNI +K +
Sbjct: 124 IVLDQLT--LNTPKTKEFANILS--NLKVGRKALIVAPSYDDNVALSARNIPGVKFVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLSYDQLIITKEAVQ 200
>gi|225027479|ref|ZP_03716671.1| hypothetical protein EUBHAL_01735 [Eubacterium hallii DSM 3353]
gi|224955214|gb|EEG36423.1| 50S ribosomal protein L4 [Eubacterium hallii DSM 3353]
Length = 198
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 111/201 (55%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G ++G L A +VH+A++ + NKR+GT TR EVRGGGRKP+ QK T
Sbjct: 3 GAQVGTIELSDSIFAVPVNEHLVHQAVVAQLANKRQGTQKAKTRSEVRGGGRKPWRQKGT 62
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
G AR+GS R P GGGVVF P PRD+S+K+NKKEK+LA+ + + S IV++E
Sbjct: 63 GHARQGSIRAPQWTGGGVVFAPTPRDYSVKMNKKEKQLAMKSVLTSKVNESKFIVLDEL- 121
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
K KTK+ + ++ KA + E + V KS+ N+ + +N++DI
Sbjct: 122 -KLAEIKTKQIKAVLDNLKVE---KALIVTKEKDDVVVKSANNLPKVATTALNNINVYDI 177
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L +T+V+T V + Y
Sbjct: 178 LKYDTVVVTSEAVAAIEEVYA 198
>gi|313897239|ref|ZP_07830783.1| 50S ribosomal protein L4 [Clostridium sp. HGF2]
gi|373122835|ref|ZP_09536695.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 21_3]
gi|422328954|ref|ZP_16409980.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 6_1_45]
gi|312957960|gb|EFR39584.1| 50S ribosomal protein L4 [Clostridium sp. HGF2]
gi|371658365|gb|EHO23646.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 6_1_45]
gi|371662787|gb|EHO27985.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 21_3]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS TG+++ E L + + + A+I + R+GT T R EVRGGGRK
Sbjct: 4 MVVLSQTGKELNEITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGG+VFGP PR++ K+NKK +RLA+ +A++
Sbjct: 64 PWRQKGTGRARQGSIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLENAM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKMLT 231
VV++F+ E PKTK F + + ++ +K F+V E EN S RNI T+ MLT
Sbjct: 124 SVVDKFE--LEAPKTKAFNQIIA--DINAPKKTLFVVSEGEDFENAFLSMRNIPTMMMLT 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++DI++A +V T + V
Sbjct: 180 ADGLNVYDIVNANKIVFTEAAV 201
>gi|291280147|ref|YP_003496982.1| 50S ribosomal protein L4 [Deferribacter desulfuricans SSM1]
gi|290754849|dbj|BAI81226.1| 50S ribosomal protein L4 [Deferribacter desulfuricans SSM1]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 119/195 (61%), Gaps = 4/195 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ +K+ E LD + ++H ++ + +R GT ST TRGEVRGGGRK
Sbjct: 4 IEVLNQENKKVKEVNLDDSIISYPVKPWLMHEVVVMQLACRRAGTHSTKTRGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG +FGPKPRD+S K+ KK+ + A+ +A+ +
Sbjct: 64 PWRQKGTGRARAGSIRSPLWVGGGTIFGPKPRDYSYKMPKKKVKNALKSALRAKLEDNAL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
++E + E KTKE + ++ +G + +K + E+ E V ++ RNI +K+L +
Sbjct: 124 KIIESLN--VENGKTKEAVAILKNFGAN--RKVLVVYNELDEKVIRAFRNIPYVKLLNVK 179
Query: 234 TLNLFDILDAETLVL 248
LN++D+++A T+++
Sbjct: 180 GLNVYDLINARTILM 194
>gi|348026019|ref|YP_004765824.1| 50S ribosomal protein L4 [Megasphaera elsdenii DSM 20460]
gi|341822073|emb|CCC72997.1| 50S ribosomal protein L4 [Megasphaera elsdenii DSM 20460]
Length = 207
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ TG + GE L+ + AV+ +A++ + N+R GT ST TRG VRGGGRKP+ Q
Sbjct: 8 NITGAQTGEIELNDSVFGVEVNEAVMRQAVLRQLANQRLGTHSTKTRGLVRGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS+R+PL GGG ++GP PR ++ K+ +K +RLA+ +A++ V++
Sbjct: 68 KGTGRARVGSSRSPLWVGGGTIWGPHPRSYAQKMPRKARRLAVKSALSDKVNTNELFVLD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
E + PKTKE + + + ++ + + E VE+ +RNI +K ++ +N+
Sbjct: 128 EIN--LAAPKTKEVVALINNFKFAGEK--VLFITDNDEVVERCARNIKGVKAISTTGVNI 183
Query: 238 FDILDAETLVLTPSTV 253
FD+L L +T S V
Sbjct: 184 FDLLHYTKLFVTKSAV 199
>gi|346312824|ref|ZP_08854359.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 2_2_44A]
gi|345905975|gb|EGX75709.1| 50S ribosomal protein L4 [Erysipelotrichaceae bacterium 2_2_44A]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS TG+++ E L + + + A+I + R+GT T R EVRGGGRK
Sbjct: 4 MVVLSQTGKELNEITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGG+VFGP PR++ K+NKK +RLA+ +A++
Sbjct: 64 PWRQKGTGRARQGSIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLENAM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKMLT 231
VV++F+ E PKTK F + + ++ +K F+V E EN S RNI T+ MLT
Sbjct: 124 SVVDKFE--LEAPKTKAFNQIVA--DINAPKKTLFVVSEGEDFENAFLSMRNIPTMMMLT 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++DI++A +V T + V
Sbjct: 180 ADGLNVYDIVNANKIVFTEAAV 201
>gi|148381420|ref|YP_001255961.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 3502]
gi|153933556|ref|YP_001385795.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 19397]
gi|153934780|ref|YP_001389202.1| 50S ribosomal protein L4 [Clostridium botulinum A str. Hall]
gi|153940969|ref|YP_001392833.1| 50S ribosomal protein L4 [Clostridium botulinum F str. Langeland]
gi|168178833|ref|ZP_02613497.1| ribosomal protein L4 [Clostridium botulinum NCTC 2916]
gi|226950932|ref|YP_002806023.1| 50S ribosomal protein L4 [Clostridium botulinum A2 str. Kyoto]
gi|384463796|ref|YP_005676391.1| 50S ribosomal protein L4 [Clostridium botulinum F str. 230613]
gi|387819761|ref|YP_005680108.1| 50S ribosomal protein L4 [Clostridium botulinum H04402 065]
gi|421834862|ref|ZP_16269789.1| 50S ribosomal protein L4 [Clostridium botulinum CFSAN001627]
gi|166234655|sp|A7FZ68.1|RL4_CLOB1 RecName: Full=50S ribosomal protein L4
gi|166234656|sp|A5I7K5.1|RL4_CLOBH RecName: Full=50S ribosomal protein L4
gi|166234657|sp|A7GJ73.1|RL4_CLOBL RecName: Full=50S ribosomal protein L4
gi|254803725|sp|C1FMV0.1|RL4_CLOBJ RecName: Full=50S ribosomal protein L4
gi|148290904|emb|CAL85040.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 3502]
gi|152929600|gb|ABS35100.1| 50S ribosomal protein L4 [Clostridium botulinum A str. ATCC 19397]
gi|152930694|gb|ABS36193.1| 50S ribosomal protein L4 [Clostridium botulinum A str. Hall]
gi|152936865|gb|ABS42363.1| 50S ribosomal protein L4 [Clostridium botulinum F str. Langeland]
gi|182670131|gb|EDT82107.1| ribosomal protein L4 [Clostridium botulinum NCTC 2916]
gi|226844588|gb|ACO87254.1| ribosomal protein L4 [Clostridium botulinum A2 str. Kyoto]
gi|295320813|gb|ADG01191.1| 50S ribosomal protein L4 [Clostridium botulinum F str. 230613]
gi|322807805|emb|CBZ05380.1| LSU ribosomal protein L4p (L1e) [Clostridium botulinum H04402 065]
gi|409743654|gb|EKN42547.1| 50S ribosomal protein L4 [Clostridium botulinum CFSAN001627]
Length = 206
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GEK+G+ L + +H+ + + NKR+GT S TR EV GGG K
Sbjct: 4 VDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVF PKPRD+ + I K K++AI +A+ S
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYRMSIPKSMKKVAIKSALTSKVNENLM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+E K E PKTKE ++ + + +K + ENV KS+RNI ++++
Sbjct: 124 VVVDEI--KLETPKTKEVVKMLNSFN---AKKTLIITNNAEENVYKSARNIEGVQIIPVN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++D+L + +V+T V + Y
Sbjct: 179 NINVYDVLKYDKVVITKDAVSKIEEVYA 206
>gi|417002533|ref|ZP_11941916.1| 50S ribosomal protein L4 [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479201|gb|EGC82298.1| 50S ribosomal protein L4 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 207
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL+ GE +G L+ + + V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VDILNIKGENVGSLELNETLFNTEISEHTVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVF PKPRD+S K+ KK +R A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGVVFAPKPRDYSYKVPKKLRRKALYSVLTSKVNDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ + E KTKE + ++ ++ KA + E V +S RNI + +
Sbjct: 124 IVLEDLN--LENAKTKEASQVLK--AINAGDKAYIVTAENDNEVYRSFRNIEGVDVSAAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D++ LV+T V
Sbjct: 180 LINVYDLVKHNKLVITKDAV 199
>gi|197117324|ref|YP_002137751.1| 50S ribosomal protein L4 [Geobacter bemidjiensis Bem]
gi|253701921|ref|YP_003023110.1| 50S ribosomal protein L4 [Geobacter sp. M21]
gi|226730668|sp|B5EFQ1.1|RL4_GEOBB RecName: Full=50S ribosomal protein L4
gi|259491560|sp|C6E4Q6.1|RL4_GEOSM RecName: Full=50S ribosomal protein L4
gi|197086684|gb|ACH37955.1| ribosomal protein L4 [Geobacter bemidjiensis Bem]
gi|251776771|gb|ACT19352.1| ribosomal protein L4/L1e [Geobacter sp. M21]
Length = 207
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 114/207 (55%), Gaps = 5/207 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L + K+GE LD D ++H A+ + N+R+GT + R V G G
Sbjct: 2 AKLDVFDIKKAKVGEIELDDAVFNDDVREYLIHEAVKIQLANRRQGTVAVKNRALVAGSG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TG+AR+G R P PGGGV FGP+P+D+++ +NKK ++ A+ +A++ +
Sbjct: 62 KKPFKQKGTGQARQGCRRAPQYPGGGVAFGPQPKDYNLSMNKKARKAALRSALSMLYKKD 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
VV + KTK F+E + + LD K + + +E S+RN+ +K+L
Sbjct: 122 AITVVNSLE--LPSIKTKAFVEVLTAFNLD---KTLVITDTATPTLELSARNVKHVKVLG 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
P LN+FDI+ +++V T + V + G
Sbjct: 177 PEGLNIFDIMKYQSVVFTEAAVRRVEG 203
>gi|160894755|ref|ZP_02075530.1| hypothetical protein CLOL250_02306 [Clostridium sp. L2-50]
gi|156863689|gb|EDO57120.1| 50S ribosomal protein L4 [Clostridium sp. L2-50]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H A++ N R+GT S TR EV GGGRKP+ QK TG AR+GS R+P GGGVVF
Sbjct: 32 LMHLAVVGQQANSRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQWTGGGVVFA 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S+K+NKKEK+LA+ +A+++ A + +VV++ + E KT F + +
Sbjct: 92 PKPRDYSVKMNKKEKQLAMKSALSAKLAEDKLVVVDKIE--LEEVKTSVFAKILANL--- 146
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
K+ + + ++ V S+ NI T+K +L+++DIL + LVLT V + Y
Sbjct: 147 KAPKSLVVTKDKNDKVVLSANNIPTVKTTATNSLSVYDILKYDKLVLTKDAVAAIEEVYA 206
>gi|256830537|ref|YP_003159265.1| 50S ribosomal protein L4 [Desulfomicrobium baculatum DSM 4028]
gi|256579713|gb|ACU90849.1| ribosomal protein L4/L1e [Desulfomicrobium baculatum DSM 4028]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 5/178 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H A+ + + R GT TRG VRGGG+KP+ QK TGRAR GS+R+PL G V+ G
Sbjct: 32 VLHLAVKSHLAKLRSGTVGVKTRGLVRGGGKKPWRQKGTGRARAGSSRSPLWRSGAVIHG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+ RD+S KINK+ ++LA+ AI+S +EN +VV + +F+ KTK F+ GL
Sbjct: 92 PQARDYSFKINKQIRKLALKMAISSRFTSENMLVVNKL--QFDEIKTKNFVACKDTLGL- 148
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
+KA +V E N+ S+RN+ + +L P+++N+++IL +VL V L R
Sbjct: 149 --KKALIVVAEKDTNLALSARNVPGILVLDPQSINVYEILKYPQMVLDQGAVLALQER 204
>gi|424835392|ref|ZP_18260057.1| 50S ribosomal protein L4 [Clostridium sporogenes PA 3679]
gi|365978185|gb|EHN14280.1| 50S ribosomal protein L4 [Clostridium sporogenes PA 3679]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GEK+G+ L + +H+ + + NKR+GT S TR EV GGG K
Sbjct: 4 VDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GG+VF PKPRD+ + I K K++AI +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRMSIPKSMKKVAIKSALTSKVNEKLM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ D K E PKTKE ++ + D K K + ENV KS+RNI ++++
Sbjct: 124 VVVD--DIKLETPKTKEVVKMLN--AFDAK-KTLIITNNAEENVYKSARNIEGVQIIPVN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++DIL + +V+T V + Y
Sbjct: 179 NINVYDILKYDKVVITKDAVSKIEEVYA 206
>gi|253580620|ref|ZP_04857884.1| 50S ribosomal protein L4/L1 [Ruminococcus sp. 5_1_39B_FAA]
gi|251847991|gb|EES75957.1| 50S ribosomal protein L4/L1 [Ruminococcus sp. 5_1_39BFAA]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G ++G L+ + +VH A++ + N R+GT TR EV GGGRK
Sbjct: 4 VTVYNMEGNEVGTMELNDAVFGVEVNEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD+ +K+NKKE+R A+ +A+ S
Sbjct: 64 PWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQDNKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ KTKE + + +KA + +NV S+RNI ++ TP
Sbjct: 124 VVVDAL--TLADVKTKEMQKVLTNL---KAEKALVITATDDKNVILSARNITDVQTATPS 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++D+++ T+++T V
Sbjct: 179 TINVYDVMNHNTVIVTKDAV 198
>gi|407797891|ref|ZP_11144806.1| 50S ribosomal protein L4 [Salimicrobium sp. MJ3]
gi|407017654|gb|EKE30411.1| 50S ribosomal protein L4 [Salimicrobium sp. MJ3]
Length = 207
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 12/200 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAA----PDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+ + + +G K+G+ LDL A P+T V+H ++ +KR+GT TRGEV G
Sbjct: 4 VALFNQSGSKVGD--LDLNDAVFGIEPNTH--VLHETVLMQQASKRQGTHKVKTRGEVSG 59
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GGRKP+ QK TGRAR+G+ R P GGG VFGP PR +S K+ KK +RLA+ +A +S
Sbjct: 60 GGRKPWRQKGTGRARQGTIRAPQWVGGGTVFGPTPRSYSYKLPKKVRRLALRSAYSSKVQ 119
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
EN VEE + PKTKE + ++ LD + A + + ENV SS N+ ++
Sbjct: 120 EENLYAVEELS--MDAPKTKEVVNFLK--ALDANESALIITAQKEENVVLSSNNLPKVET 175
Query: 230 LTPRTLNLFDILDAETLVLT 249
+T +++ D+L + +++T
Sbjct: 176 VTFDQVSVLDLLTHDKVIVT 195
>gi|258406184|ref|YP_003198926.1| 50S ribosomal protein L4 [Desulfohalobium retbaense DSM 5692]
gi|257798411|gb|ACV69348.1| ribosomal protein L4/L1e [Desulfohalobium retbaense DSM 5692]
Length = 206
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ I+ + + +GE L + + ++H+ + + + KRRGT TR +RGGGRK
Sbjct: 4 VQIVDKSNQAVGEVTLSSEVFEREVRAEILHQVVRSQLAAKRRGTVGVKTRSLIRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR G+ R+P+ GG +V GP+ RD+ IK+NKK KRLA+ A++S A +N
Sbjct: 64 PWRQKGTGRARAGTVRSPIWTGGAIVHGPQARDYDIKVNKKVKRLALKMAMSSRLAEDNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ E KTK F + + LD K K + E +E S+RNI + ++T
Sbjct: 124 VVVDSVTP--EEVKTKSFRKIQEQ--LDLK-KCLIVTAEKDNTLELSARNIPGVTVMTWD 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN FD+L+ + LVL V+ + + G
Sbjct: 179 NLNTFDVLNHDQLVLEAKAVEKIEEKLG 206
>gi|91200668|emb|CAJ73719.1| strongly similar to 50S ribosomal protein L4 [Candidatus Kuenenia
stuttgartiensis]
Length = 203
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Query: 93 NKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKIN 152
NKR+GT ST TR EV GGG+KP++QK TG+AR GS+R+P+ GGGV FGPKPRD+S I
Sbjct: 42 NKRQGTVSTKTRAEVSGGGKKPWAQKHTGKARAGSSRSPIWRGGGVAFGPKPRDYSYSIP 101
Query: 153 KKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212
K K+ A+ +A++S +VV++ D F PKTK + ++ +G+ + ++ +
Sbjct: 102 KMAKKQALFSALSSKIKDNEVVVVDKLD--FASPKTKHMVSLLKSFGM-VGISSLIVISK 158
Query: 213 VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+E++ KSSRNI ++M+ LN ++IL + +++T + L
Sbjct: 159 ATESLLKSSRNIPYVRMMECHDLNAYEILKPKKILITKQALSSL 202
>gi|328953157|ref|YP_004370491.1| 50S ribosomal protein L4/L1e [Desulfobacca acetoxidans DSM 11109]
gi|328453481|gb|AEB09310.1| ribosomal protein L4/L1e [Desulfobacca acetoxidans DSM 11109]
Length = 207
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 113/179 (63%), Gaps = 5/179 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + +R GTAST R EVRGGG KP+ QK TGRAR GS R+PL GGGVVFG
Sbjct: 32 ILHEVVTMQLACRRAGTASTKGRSEVRGGGHKPWRQKGTGRARVGSIRSPLWRGGGVVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPR ++ K KK +RLA+ A++S A ++++++ ++ PKTK+FI + ++ ++
Sbjct: 92 PKPRSYAYKPPKKVRRLALKMALSSKLADGQLLILDQY--PYDSPKTKDFIRVLEKFQIN 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
KA F+ + ++ + SSRN+ ++++ +N++DIL + LV+ + + R+
Sbjct: 150 ---KALFITADDNQVLTLSSRNVPYVQIMRTEGINVYDILRYDHLVVFQPAISQIEERF 205
>gi|340753383|ref|ZP_08690169.1| 50S ribosomal protein L4 [Fusobacterium sp. 2_1_31]
gi|422315194|ref|ZP_16396633.1| 50S ribosomal protein L4 [Fusobacterium periodonticum D10]
gi|229422975|gb|EEO38022.1| 50S ribosomal protein L4 [Fusobacterium sp. 2_1_31]
gi|404592777|gb|EKA94530.1| 50S ribosomal protein L4 [Fusobacterium periodonticum D10]
Length = 209
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 80 RAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVV 139
+ V+H L ++ R+GTAST TR VRGGGRKP+ QK TGRAR+GS R P GGGV
Sbjct: 30 KVVLHEVLTAELAAARQGTASTKTRAMVRGGGRKPFKQKGTGRARQGSIRAPHMVGGGVT 89
Query: 140 FGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWG 199
FGP PR + K+NKK + LA+ +A+++ AA N +V+ +++G + PKTK + + +
Sbjct: 90 FGPHPRSYEKKVNKKVRNLALRSALSAKVAAGNVLVL-DYEG-IDTPKTKVIVNLVNK-- 145
Query: 200 LDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
+D KQK F+V ++ + N+ S+RN+ +L P + ++ +L E ++LT
Sbjct: 146 VDAKQKQLFVVGDLIKDYNLYLSARNLENAVILQPNEIGVYWLLKQEKVILT 197
>gi|304315941|ref|YP_003851086.1| 50S ribosomal protein L4/L1e [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777443|gb|ADL68002.1| ribosomal protein L4/L1e [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 206
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE+IGE L + V+H ++ + ++R+GT ST RGEVRGGG K
Sbjct: 4 VAVYNINGEQIGEMELSDNVFGVEVNVPVMHEVVLNYLASQRQGTHSTKRRGEVRGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGVVFGPKPRD+S I KK KRLA+ +A+ S+ +N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIKGGVVFGPKPRDYSYNIPKKVKRLALKSAL-SSKVRDNE 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I+V + E PKTK+ + ++++ + + A ++ E +NV SSRNI +K +
Sbjct: 123 IIVIDDINIDE-PKTKKVADMLKKFNV---KNALIVIPEDKKNVVLSSRNIPNVKAVYAN 178
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+LN +D+L + ++T V+
Sbjct: 179 SLNTYDVLKYDRFIITKDAVN 199
>gi|262038243|ref|ZP_06011633.1| ribosomal protein, L4/L1 family [Leptotrichia goodfellowii F0264]
gi|261747710|gb|EEY35159.1| ribosomal protein, L4/L1 family [Leptotrichia goodfellowii F0264]
Length = 214
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 119/205 (58%), Gaps = 12/205 (5%)
Query: 54 LPILS---FTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+P+L+ G K G + + + + V+H L+ ++ R G AST TR EVRGG
Sbjct: 1 MPVLNTYKLDGSKAGTVEVKEEIFGIEPNKTVMHEVLVAELAGAREGNASTKTRAEVRGG 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
GRKP+ QK TGRAR+GS R P GGGVV GPKPRD++ K+NKK +RLA+ +A+A+
Sbjct: 61 GRKPFRQKGTGRARQGSTRAPHMVGGGVVHGPKPRDYTKKVNKKVRRLALRSALATKINN 120
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE------NVEKSSRNI 224
+ IV+++F + PKTK F++ + +K F+ E N+E S RN+
Sbjct: 121 GDLIVLDDFT--LDVPKTKTFVQFAKALNF-AGEKQLFIADYNGETFNRDINLEYSVRNL 177
Query: 225 GTLKMLTPRTLNLFDILDAETLVLT 249
+ L R+L++F ++ + +V+T
Sbjct: 178 EKVMTLDSRSLSIFWLIKQDKIVVT 202
>gi|329121829|ref|ZP_08250444.1| 50S ribosomal protein L4 [Dialister micraerophilus DSM 19965]
gi|327467767|gb|EGF13259.1| 50S ribosomal protein L4 [Dialister micraerophilus DSM 19965]
Length = 207
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 119/203 (58%), Gaps = 10/203 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+ GE L+ + AV+H+A++ N+R GT +T TRG VRGGG+K
Sbjct: 4 VTLYNIAGQAAGEVELNDSIFGVEYNEAVIHQAVVRQQANERLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + KK +RLA+ +A++ A
Sbjct: 64 PWRQKGTGRARVGSIRSPLWVGGGTVFGPTPRSHAKGMTKKARRLAVKSALSEKLRANEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK---SSRNIGTLKML 230
IV+++ + FE PKTK+ +E M+ + + + L+++ + VE S+RNI +K +
Sbjct: 124 IVIDQIN--FEAPKTKQVVEMMKAF-----EASKALIIDGGKAVENTVLSARNIPGVKAI 176
Query: 231 TPRTLNLFDILDAETLVLTPSTV 253
+N++D++ L +T V
Sbjct: 177 GTCGINIYDLVHYTKLFMTQEAV 199
>gi|257067059|ref|YP_003153315.1| 50S ribosomal protein L4 [Anaerococcus prevotii DSM 20548]
gi|256798939|gb|ACV29594.1| ribosomal protein L4/L1e [Anaerococcus prevotii DSM 20548]
Length = 207
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL+ GE +G L+ + + V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VDILNIKGENVGSLELNETLFNTEISEHSVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVF PKPRD+S K+ KK +R A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGVVFAPKPRDYSYKVPKKLRRKALYSVLTSKVVDGEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ D K E KTKE + ++ +KA + E NV +S RNI + + +
Sbjct: 124 IVLD--DLKLENNKTKEAAAVLN--AVEAGKKAYVVTAENDNNVYRSFRNIEGVDVASAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D++ LV+T +
Sbjct: 180 LINVYDLVRHNKLVITKDAI 199
>gi|339624378|ref|ZP_08660167.1| 50S ribosomal protein L4 [Fructobacillus fructosus KCTC 3544]
Length = 207
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G K + L+ + A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSKASDLDLNEEVFAVEANNAVITEAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGG+VFGP PR ++ +INKK LA+ +A++ A
Sbjct: 62 RKPWKQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYRINKKAYNLALKSALSQKVADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ F KTK+F + + +D KA +V +EN +++RN+ ++++T
Sbjct: 122 KLVVVDAL--AFSEAKTKDFKQVLANLAVDS--KALVIVDGNNENAIRAARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+N+ D+++A+ LV+ S ++ + G
Sbjct: 178 AAGVNVLDVVNADKLVVVQSAIEEIQG 204
>gi|308070974|ref|YP_003872579.1| 50S ribosomal protein L4 [Paenibacillus polymyxa E681]
gi|310644201|ref|YP_003948960.1| 50S ribosomal protein L4 [Paenibacillus polymyxa SC2]
gi|374320646|ref|YP_005073775.1| 50S ribosomal protein L4 [Paenibacillus terrae HPL-003]
gi|305860253|gb|ADM72041.1| 50S ribosomal protein L4 [Paenibacillus polymyxa E681]
gi|309249152|gb|ADO58719.1| 50S ribosomal protein L4 [Paenibacillus polymyxa SC2]
gi|357199655|gb|AET57552.1| 50S ribosomal protein L4 [Paenibacillus terrae HPL-003]
gi|392304897|emb|CCI71260.1| 50S ribosomal protein L4 BL4 [Paenibacillus polymyxa M1]
Length = 207
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L+ + + V+H A++ + + R+GT R EVRGGGRK
Sbjct: 4 VALFNISGSQVGEIELNDAVFGIEPNKHVLHDAVVMQLASLRQGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ K+ KK +RLAI +A++S
Sbjct: 64 PWKQKGTGRARQGSIRAPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIKSALSSKVIENEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ PKTKEF + L +KA + +NV S+RNI +K +
Sbjct: 124 IVLDALT--LNGPKTKEFAAILNN--LKADRKALIVAPSYDDNVALSARNIPGVKFVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLGHDKLIITKEAV 199
>gi|300857245|ref|YP_003782229.1| 50S ribosomal protein L4 [Clostridium ljungdahlii DSM 13528]
gi|300437360|gb|ADK17127.1| 50S ribosomal protein L4 [Clostridium ljungdahlii DSM 13528]
Length = 206
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+ + L K + VH+ ++ + NKR+GT S TR EV GGG KP+ QK T
Sbjct: 11 GQKVEDFELSDKVFGVEVNENAVHQVVVALLANKRQGTQSAKTRAEVSGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF KPRD+ I + K KR+A+ +A++S A +V+E +
Sbjct: 71 GRARQGSIRAPQWIHGGIVFAVKPRDYRISLTKSVKRVAMKSALSSKVADNEMVVLENLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE ++ + + +KA + E ++NV S RNI + ++ LN++D+
Sbjct: 131 --LETPKTKEIVKMLDAFN---AKKALIVTAESNKNVYVSGRNIQGVSVIPVNNLNVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKYEKLIITKDAVSKIEEVYA 206
>gi|157690901|ref|YP_001485363.1| 50S ribosomal protein L4 [Bacillus pumilus SAFR-032]
gi|194017590|ref|ZP_03056201.1| ribosomal protein L4/L1 family [Bacillus pumilus ATCC 7061]
gi|166990946|sp|A8F986.1|RL4_BACP2 RecName: Full=50S ribosomal protein L4
gi|157679659|gb|ABV60803.1| ribosomal protein L4 [Bacillus pumilus SAFR-032]
gi|194010862|gb|EDW20433.1| ribosomal protein L4/L1 family [Bacillus pumilus ATCC 7061]
Length = 207
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G GE L+ + +VV A++ + R+GT TR EVRGGGRK
Sbjct: 4 VALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI + ++S N
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ + KTKEF ++ GL ++KA + + +E V S+RNI + ++
Sbjct: 124 IVLEDLT--LDAVKTKEFAGILK--GLSVEKKALIVTADANETVALSARNIPGVTVVEAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+++ E L++T + V+
Sbjct: 180 GINVLDVVNHEKLLITKAAVE 200
>gi|225175673|ref|ZP_03729667.1| ribosomal protein L4/L1e [Dethiobacter alkaliphilus AHT 1]
gi|225169002|gb|EEG77802.1| ribosomal protein L4/L1e [Dethiobacter alkaliphilus AHT 1]
Length = 208
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE+ GE L A A +H+A++ + N+R GTA T R EVRGGGRK
Sbjct: 4 VALYNTAGEQQGEIELSEAVFASKVNEAAMHQAVLAYLANQRLGTAKTKDRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR GS R+P+ GGG+ FGP R++ + KK +RLA+ +A+ S +
Sbjct: 64 PWRQKGTGRARHGSIRSPIWRGGGITFGPDGRRNYKQSLPKKIRRLALKSALTSKVNTGS 123
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
IV+++ + PKTKE ++ + L+ +K + ENV KS+RNI +K +
Sbjct: 124 LIVLDQL--AMDAPKTKEMVQVLN--NLNTGRKVLIITDTPQENVIKSARNIPGVKTTST 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
LN++DIL+ + LV+T V
Sbjct: 180 NQLNVYDILNTDNLVITRDAV 200
>gi|295099236|emb|CBK88325.1| LSU ribosomal protein L4P [Eubacterium cylindroides T2-87]
Length = 209
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +++ TG +G L+ + + + AL+ ++R+GTA T R EV GGG
Sbjct: 2 ATIDVINQTGAVVGSMELNDAVFGIEPNQQSLFDALVMQQASRRQGTADTKGRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS R GGG VFG PR + INKK +RLA+ +A++ AA+
Sbjct: 62 RKPYRQKGTGRARQGSIRATQFRGGGTVFGATPRSYKYTINKKVRRLAVKSALSEKLAAQ 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKM 229
V+++F+ PKTK F+ M + +K F+V E E N S+RNI + M
Sbjct: 122 ALSVLDKFE--ISEPKTKTFVSIME--AIKAPKKTLFVVAENEEATNAYLSARNIPGVMM 177
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
LT +N+FD+++A +V+T + V
Sbjct: 178 LTSTGINVFDLVNANAIVMTSAAV 201
>gi|290968243|ref|ZP_06559786.1| ribosomal protein L4/L1 family protein [Megasphaera genomosp.
type_1 str. 28L]
gi|335050094|ref|ZP_08543074.1| 50S ribosomal protein L4 [Megasphaera sp. UPII 199-6]
gi|290781725|gb|EFD94310.1| ribosomal protein L4/L1 family protein [Megasphaera genomosp.
type_1 str. 28L]
gi|333761726|gb|EGL39258.1| 50S ribosomal protein L4 [Megasphaera sp. UPII 199-6]
Length = 207
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 4/196 (2%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ TG K GE L+ + AV+ +AL+ + N+R GT ST TRG VRGGGRKP+ Q
Sbjct: 8 NITGAKTGEIELNDSVFGVEVNEAVMRQALLRQLANERLGTHSTKTRGLVRGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS+R+PL GGG V+GP PR ++ K+ +K +RLA+ +A++ V++
Sbjct: 68 KGTGRARVGSSRSPLWVGGGTVWGPHPRSYAQKMPRKARRLAVKSALSDKVNTNELFVLD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
E K KTKE + ++ + ++ V + E V + +RNI +K ++ +N+
Sbjct: 128 EI--KLAAAKTKEVVALIKNFQFTGEK--VLFVTDNDEIVIRCARNIEGVKAISTEGVNI 183
Query: 238 FDILDAETLVLTPSTV 253
FD+L L +T S V
Sbjct: 184 FDLLHYTKLFVTKSAV 199
>gi|372211204|ref|ZP_09499006.1| 50S ribosomal protein L4 [Flavobacteriaceae bacterium S85]
Length = 209
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ +L +TG+ G E L A + ++ + + NKR+GT RGE+ G R
Sbjct: 3 VAVLDYTGKNTGREVELSDAVFAIEPNDHAIYLDVKQHLANKRQGTHKAKERGEIAGSTR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K QK TG AR GS ++P+ GGG +FGP+ RD+S K+NK KRLA +A + A N
Sbjct: 63 KIKKQKGTGTARAGSIKSPVFRGGGRIFGPRNRDYSFKLNKNLKRLARKSAFSLQAKDAN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
IVVE+F+ FE PKTKEF+ ++ LD QK F++ E + NV SSRN+ +++T
Sbjct: 123 IIVVEDFN--FEAPKTKEFVNVLKALELD-NQKTLFVLGEANNNVYLSSRNLKGSEVVTS 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
LN + +L+A +VL +
Sbjct: 180 DELNTYKVLNANKVVLLEGAI 200
>gi|313891529|ref|ZP_07825139.1| 50S ribosomal protein L4 [Dialister microaerophilus UPII 345-E]
gi|313119988|gb|EFR43170.1| 50S ribosomal protein L4 [Dialister microaerophilus UPII 345-E]
Length = 207
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 119/203 (58%), Gaps = 10/203 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+ GE L+ + AV+H+A++ N+R GT +T TRG VRGGG+K
Sbjct: 4 VTLYNIAGQAAGEVELNDSIFGVEYNEAVIHQAVVRQQANERLGTHATKTRGLVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGG VFGP PR + + KK +RLA+ +A++ A
Sbjct: 64 PWRQKGTGRARVGSIRSPLWVGGGTVFGPTPRSHAKGMTKKARRLAVKSALSEKLRANEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK---SSRNIGTLKML 230
IV+++ + FE PKTK+ +E M+ + + + L+++ + VE S+RNI +K +
Sbjct: 124 IVIDQIN--FEAPKTKQVVEMMKAF-----EASKALIIDGGKAVENTVLSARNIPGVKAI 176
Query: 231 TPRTLNLFDILDAETLVLTPSTV 253
+N++D++ L +T V
Sbjct: 177 GTCGINIYDLVHYTKLFITQEAV 199
>gi|308272978|emb|CBX29582.1| 50S ribosomal protein L4 [uncultured Desulfobacterium sp.]
Length = 207
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 5/208 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + + + GEK+ + L +V+H + + +R G+AS R +VRG
Sbjct: 2 SLIDVYNLNGEKVSQLELTDSIFNIPVKPSVLHEVVTMQLACRRAGSASVKHRSDVRGST 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RK + QK TGRARRG ++PL GGG +FGP PR +S K+ KK K+LA+ A++S
Sbjct: 62 RKLFRQKGTGRARRGDIKSPLLRGGGSIFGPDPRSYSYKVPKKIKKLALKMALSSKTINN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N IV+++F+ E KTK FI + + +KA + +++E++E SSRN+ +K++
Sbjct: 122 NLIVIDKFE--LEEAKTKNFIAVINTLKI---KKALIITEKLNESLELSSRNVPDIKVMR 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGR 259
LN++DIL + L+L +++ + GR
Sbjct: 177 FEGLNVYDILKYDKLILLETSIKGIEGR 204
>gi|193214801|ref|YP_001996000.1| 50S ribosomal protein L4 [Chloroherpeton thalassium ATCC 35110]
gi|226730640|sp|B3QY25.1|RL4_CHLT3 RecName: Full=50S ribosomal protein L4
gi|193088278|gb|ACF13553.1| ribosomal protein L4/L1e [Chloroherpeton thalassium ATCC 35110]
Length = 210
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 5/173 (2%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
M N+ +GT TR EV GGGRKPY QK TG ARRGS+R+P+ GGG +FGPKP D+ +
Sbjct: 41 MANQHQGTHKVKTRSEVSGGGRKPYRQKGTGNARRGSSRSPVMIGGGAIFGPKPHDYVVG 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
INKK KRLA +A++ A IV+E++ KTKE + ++ GL+ +K T L+
Sbjct: 101 INKKMKRLARISALSYKAKNNEIIVMEDYVP--SEIKTKEVVSFLKSLGLN--EKKTLLL 156
Query: 211 MEVSENV-EKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
M +V KS RNI L +L + +D+L+ +TL++ S ++ L GV
Sbjct: 157 MPSKNDVMYKSGRNISKLSILEANKASTYDLLNNKTLLIQKSALETLERSLGV 209
>gi|168181865|ref|ZP_02616529.1| 50S ribosomal protein L4 [Clostridium botulinum Bf]
gi|237796941|ref|YP_002864493.1| 50S ribosomal protein L4 [Clostridium botulinum Ba4 str. 657]
gi|259491549|sp|C3KVQ0.1|RL4_CLOB6 RecName: Full=50S ribosomal protein L4
gi|182674730|gb|EDT86691.1| 50S ribosomal protein L4 [Clostridium botulinum Bf]
gi|229261648|gb|ACQ52681.1| 50S ribosomal protein L4 [Clostridium botulinum Ba4 str. 657]
Length = 206
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GEK+G+ L + +H+ + + NKR+GT S TR EV GGG K
Sbjct: 4 VDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GG+VF PKPRD+ + I K K++AI +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRMSIPKSMKKVAIKSALTSKVNEKLM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ D K E PKTKE ++ + + +K + ENV KS+RNI ++++
Sbjct: 124 VVVD--DIKLETPKTKEVVKMLNAFN---AKKTLIITNNAEENVYKSARNIEGVQIIPVN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++DIL + +V+T V + Y
Sbjct: 179 NINVYDILKYDKVVITKDAVSKIEEVYA 206
>gi|410582520|ref|ZP_11319626.1| 50S ribosomal protein L4, bacterial/organelle [Thermaerobacter
subterraneus DSM 13965]
gi|410505340|gb|EKP94849.1| 50S ribosomal protein L4, bacterial/organelle [Thermaerobacter
subterraneus DSM 13965]
Length = 212
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 56 ILSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKP 114
+ + GE++GE L D AP A++H+A++ + N+RRGTA+T TRG V GGGRKP
Sbjct: 6 VYNTQGERVGEIELSDAVFGAP-VREALMHQAVVRYLANQRRGTAATKTRGMVSGGGRKP 64
Query: 115 YSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI 174
+ QK TGRAR+GS R P GG+VFGP+PRD++ + KK +R A+ +A+++ A I
Sbjct: 65 WRQKGTGRARQGSIRAPQWRKGGIVFGPQPRDYTQDLPKKARRAALRSALSAKVADGELI 124
Query: 175 VVEEFDG-KFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+E D ERP+T+E +RR L+ K + F++ E ++ + S RN+ T
Sbjct: 125 VLEGLDDLGLERPRTREMAALIRRLDLEGK-RPLFVLAEPNKTLYLSVRNLPGADTETVD 183
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN++ +L +VL V+
Sbjct: 184 RLNVYQVLRHGHVVLAREAVE 204
>gi|169350796|ref|ZP_02867734.1| hypothetical protein CLOSPI_01570 [Clostridium spiroforme DSM 1552]
gi|169292382|gb|EDS74515.1| 50S ribosomal protein L4 [Clostridium spiroforme DSM 1552]
Length = 207
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT R EV GGG+KP+ QK TGRAR+GS R P GGGVVFGP PR + K+N+K
Sbjct: 45 RQGTHKVKNRTEVSGGGKKPWRQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYKFKLNRK 104
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
+RLA+ +A+++ + +E KF+ PKTKE ++ + LD K +V E+
Sbjct: 105 VRRLALKSALSTKIIDNEFMALEAI--KFDAPKTKEMVKVLA--NLDAPTKTLIVVDEID 160
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
ENV +S+ NI +K+L R +N++DIL+++ L++T + +
Sbjct: 161 ENVARSANNIPGVKLLDARRVNVYDILNSDKLIMTEAAI 199
>gi|170759420|ref|YP_001788820.1| 50S ribosomal protein L4 [Clostridium botulinum A3 str. Loch Maree]
gi|226730645|sp|B1KSM4.1|RL4_CLOBM RecName: Full=50S ribosomal protein L4
gi|169406409|gb|ACA54820.1| 50S ribosomal protein L4 [Clostridium botulinum A3 str. Loch Maree]
Length = 206
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 5/210 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + GEK+G+ L + +H+ + + NKR+GT S TR EV GGG
Sbjct: 2 AKVDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
KP+ QK TGRAR+GS R P GG+VF PKPRD+ + I K K++AI +A+ S
Sbjct: 62 IKPWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRMSIPKSMKKVAIKSALTSKVNEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+E K E PKTKE ++ + + +K + ENV KS+RNI ++++
Sbjct: 122 LMVVVDEI--KLETPKTKEVVKMLNAFN---AKKTLIITNNAEENVYKSARNIEGVQIIP 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++D+L + +++T V + Y
Sbjct: 177 VNNINVYDVLKYDKVIITKDAVSKIEEVYA 206
>gi|365128104|ref|ZP_09340420.1| 50S ribosomal protein L4 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363623451|gb|EHL74570.1| 50S ribosomal protein L4 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 207
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G+K+ L V+H A++ + N+R+GT ST TR EV GGGRKP+
Sbjct: 6 VLDMNGKKVSTVELSDAVFGITPNEKVMHAAVVNFLANQRQGTQSTKTRSEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGV GPKPRD+S ++NKK KRLA+ +A++S A + + IV
Sbjct: 66 RQKGTGRARQGSTRSPQWTHGGVALGPKPRDYSYRLNKKVKRLALLSALSSKAQSGDIIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++E K KTK + + G D +KA + V + KS+ NI +K T ++
Sbjct: 126 IDEL--KAAEYKTKTVVNMLTAIGAD--KKALIVTPAVDAKLVKSAANIPGVKTATADSI 181
Query: 236 NLFDILDAETLVLT 249
N +++L+ V++
Sbjct: 182 NTYEVLNGGKFVIS 195
>gi|309777134|ref|ZP_07672097.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915004|gb|EFP60781.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 3_1_53]
Length = 209
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS TG+++ E L + + + A+I + R+GT T R EVRGGGRK
Sbjct: 4 MVVLSQTGKELKEITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGG+VFGP PR++ K+NKK +RLA+ +A++
Sbjct: 64 PWRQKGTGRARQGSIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLENAM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKMLT 231
VV++F+ E PKTK F + + ++ +K F+V E EN S RNI T+ MLT
Sbjct: 124 GVVDKFE--LEAPKTKAFNQIVA--DINAPKKTLFVVSEGEDFENAFLSMRNIPTMMMLT 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++DI++A +V T + V
Sbjct: 180 ADGLNVYDIVNANKIVFTEAAV 201
>gi|433461753|ref|ZP_20419356.1| 50S ribosomal protein L4 [Halobacillus sp. BAB-2008]
gi|432189768|gb|ELK46845.1| 50S ribosomal protein L4 [Halobacillus sp. BAB-2008]
Length = 207
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G +GE L+ + V+H ++ N R+GT R EV GGGRK
Sbjct: 4 VALLNQGGSNVGEIELNDAVFGIEPNTHVLHETVLMQRANLRQGTHKVKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S + +K +RLA+ +A +S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYTMPRKVRRLALQSAYSSKVKEENI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E E PKTKE + ++ LD +KA + ENV S+ NI T+K L
Sbjct: 124 IVLESLS--LEAPKTKEVVNMLK--ALDVNEKALIVTAGKDENVTLSANNIPTVKSLPVE 179
Query: 234 TLNLFDILDAETLVLT 249
+++ D+L + L+LT
Sbjct: 180 EVSVLDLLTHDKLILT 195
>gi|374374182|ref|ZP_09631841.1| ribosomal protein L4/L1e [Niabella soli DSM 19437]
gi|373233624|gb|EHP53418.1| ribosomal protein L4/L1e [Niabella soli DSM 19437]
Length = 212
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 118/199 (59%), Gaps = 8/199 (4%)
Query: 54 LPILSFTGEKIGETYL---DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+ +L+ G+ G + D+ A P+ V++ A+ + +R+GT TR EV+G
Sbjct: 3 IEVLNIEGKSTGRSVELPDDIFGAEPNDH--VIYLAVKQYLAAQRQGTHKVKTRAEVQGA 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
RK + QK TG +R+G+ R PL GGG +FGPKPRD+S K+NKK K LA +A++ A A
Sbjct: 61 SRKLHKQKGTGGSRKGNIRNPLYKGGGTIFGPKPRDYSFKLNKKVKDLAKISALSYKAKA 120
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
+VVE+ + E PKTK A+ +W + K K F+ E ++NVE S RN+ ++ L
Sbjct: 121 NAIVVVEDIN--LEVPKTKTLTTALSKWNVGDK-KLMFITAEPNDNVELSLRNVPSVLAL 177
Query: 231 TPRTLNLFDILDAETLVLT 249
+N +DI+++E LVL+
Sbjct: 178 PLSDINTYDIVNSEVLVLS 196
>gi|304405615|ref|ZP_07387274.1| ribosomal protein L4/L1e [Paenibacillus curdlanolyticus YK9]
gi|304345654|gb|EFM11489.1| ribosomal protein L4/L1e [Paenibacillus curdlanolyticus YK9]
Length = 207
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 8/203 (3%)
Query: 54 LPILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + +G ++GE L + P+T V+H A++ +RRGT T R EVRGGG
Sbjct: 4 VALYNVSGSQVGEVELADSVFGIQPNTH--VLHSAVLLQQAAERRGTHKTKGRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGG VFGP PR + K+ +K +RLAI +A+++ +
Sbjct: 62 RKPWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYGFKLPRKVRRLAIKSALSTKVISN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+V+++ PKTKEF + L +KA + +NV S+RNI +K +
Sbjct: 122 EIVVLDQL--ALATPKTKEFAAILN--NLKVARKALVVTANYEDNVALSARNIPGVKFVA 177
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
+N+ D+L + L++T V+
Sbjct: 178 AEGINVLDVLQYDRLIITKEAVE 200
>gi|167771266|ref|ZP_02443319.1| hypothetical protein ANACOL_02624 [Anaerotruncus colihominis DSM
17241]
gi|167666517|gb|EDS10647.1| 50S ribosomal protein L4 [Anaerotruncus colihominis DSM 17241]
Length = 207
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 4/178 (2%)
Query: 83 VHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGP 142
VH ++ + N+R+GT STLTR EV GGGRKP+ QK TG AR+GS R P GG+ GP
Sbjct: 33 VHACVVNYLANQRQGTQSTLTRTEVSGGGRKPWRQKGTGHARQGSIRAPQWRKGGIALGP 92
Query: 143 KPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDP 202
KPR + +NKK KRLAI + + A N IVV+ E KTK +E ++ G D
Sbjct: 93 KPRSYRYTLNKKLKRLAIKSVFSDKVAGSNLIVVDSI--ALEGFKTKAVVEMLKALGAD- 149
Query: 203 KQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+KA L+ E+ + + KS+ NI +K T+N++D+++ + ++ V L Y
Sbjct: 150 -KKALILMPELDQKLVKSAANIPGVKTALVNTINVYDLVNCDKFIVCKDAVAKLEEVY 206
>gi|328951235|ref|YP_004368570.1| 50S ribosomal protein L4/L1e [Marinithermus hydrothermalis DSM
14884]
gi|328451559|gb|AEB12460.1| ribosomal protein L4/L1e [Marinithermus hydrothermalis DSM 14884]
Length = 207
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 9/208 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
LP++S +G+K E ++L + V++ + + +RRGTAST TRGEV RK
Sbjct: 4 LPVISKSGKK--EVQVNLPE---EINPHVLYEVVRWQLAKRRRGTASTKTRGEVAYSSRK 58
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
Y QK TGRAR G P+ GGG VFGPKPRD+S + KK ++L ++ AIA A E
Sbjct: 59 LYPQKHTGRARHGDRGAPIFVGGGTVFGPKPRDYSYTLPKKVRKLGLAMAIADRAKEEKL 118
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VVE F+G KTKEF+ + GLD + T LV+ +E V +++RN+ +L P
Sbjct: 119 LVVEAFEGV--NGKTKEFLAWAKANGLDGSE--TVLVVTENELVRRAARNLPWASVLEPE 174
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DIL E L+L + + R G
Sbjct: 175 GLNVYDILRHERLLLDEAALKLALERIG 202
>gi|153812866|ref|ZP_01965534.1| hypothetical protein RUMOBE_03273 [Ruminococcus obeum ATCC 29174]
gi|149831078|gb|EDM86167.1| 50S ribosomal protein L4 [Ruminococcus obeum ATCC 29174]
Length = 206
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G ++G L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 ANVTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+ +K+NKKE+R A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQEN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ KTKE + + D KA + + + V S+RNI ++ T
Sbjct: 122 KLVVVDSL--ALAEAKTKEMQKVLTNLKAD---KALVVTADDDQKVVLSARNIADVQTAT 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++D++ T+V+T V
Sbjct: 177 VNTINVYDVMKHNTVVVTKDAV 198
>gi|254442040|ref|ZP_05055516.1| ribosomal protein L4/L1 family [Verrucomicrobiae bacterium DG1235]
gi|198256348|gb|EDY80656.1| ribosomal protein L4/L1 family [Verrucomicrobiae bacterium DG1235]
Length = 211
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 5/204 (2%)
Query: 54 LPILSFTGEKIGETYLD-LKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L + G + GET +D L D V ++ N R+G+AST TRGEVRGGG+
Sbjct: 3 LKLFKNDGSEGGETEVDGLPVFEGDKGLQAVKEVVVAQAANGRQGSASTKTRGEVRGGGK 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TGRAR GSNR+P+ GGG+VFGP+PRD+S KINKK K LA A+ + E+
Sbjct: 63 KPWRQKGTGRARAGSNRSPIWVGGGIVFGPRPRDYSKKINKKVKTLAFGRALVDRISDES 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+V++ D P + E + R G+ PK K + E+S+ + RN+ + +
Sbjct: 123 IVVIDSLD---IAPAKTKVAEGLVR-GIAPKGKVLVIDKELSDTSVLALRNLVGVDLEEA 178
Query: 233 RTLNLFDILDAETLVLTPSTVDFL 256
+++ D+ +T+++T S +D L
Sbjct: 179 SLVSVTDLCQFKTIIVTRSGLDVL 202
>gi|451817060|ref|YP_007453261.1| 50S ribosomal protein L4 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783039|gb|AGF54007.1| 50S ribosomal protein L4 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 206
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K+ + L+ A + +H+ ++ + NKR+GT ST TR EVRGGG KP+ QK T
Sbjct: 11 GNKVADMELNESVFAAEINEYALHQVVVALLANKRQGTQSTKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF PKPRD+ + + K +++A+ +A+ S IV++ +
Sbjct: 71 GRARQGSIRAPQWIKGGIVFAPKPRDYRVSVPKSMRKVAMKSALTSKVQDNQMIVLDSLN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK +E ++ L+ K KA + E +E V KS+RNI + ++ +N++D+
Sbjct: 131 --FEAPKTKNMVEMLK--ALEAK-KALIITAESNEVVYKSARNIQGINIIPANNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E L++T V + Y
Sbjct: 186 LKYEKLIITKDAVSKIEEVYA 206
>gi|255526579|ref|ZP_05393486.1| ribosomal protein L4/L1e [Clostridium carboxidivorans P7]
gi|296187267|ref|ZP_06855663.1| ribosomal protein L4/L1 family protein [Clostridium carboxidivorans
P7]
gi|255509687|gb|EET86020.1| ribosomal protein L4/L1e [Clostridium carboxidivorans P7]
gi|296048138|gb|EFG87576.1| ribosomal protein L4/L1 family protein [Clostridium carboxidivorans
P7]
Length = 206
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L + + +H+ ++ + NKR+GT S TR EV GGG KP+ QK T
Sbjct: 11 GKKVGDVQLSDNVFGVEVNQYALHQVVVALLANKRQGTQSAKTRSEVSGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF KPRD+ + K +R+A+ +A+ S E +V+E +
Sbjct: 71 GRARQGSIRAPQWIHGGMVFAVKPRDYRTSVPKSMRRVAMKSALTSKVNDEQIVVLESLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE ++ + L+ K K + E +EN KS+RNI +++L LN++D+
Sbjct: 131 --LEAPKTKEVVKMLD--ALNAK-KTLIVTSESNENAYKSARNIQGVEILPVNNLNVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L E LV+T V + Y
Sbjct: 186 LKYEKLVITKDAVSKIEEVYA 206
>gi|404330450|ref|ZP_10970898.1| 50S ribosomal protein L4 [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 207
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + G ++G L + V+++A++ ++R+GT + R VRGGGRK
Sbjct: 4 LTVFDQKGTEVGNVDLPDSVYGIEPNEHVLYQAVVMQQASQRQGTHAVKNRSAVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLAI +A++ +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYAYKLPKKVRRLAIRSALSDKVGTSDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ K + PKTKEF+ ++ L +KA F+ E V S+RNI +K+LT
Sbjct: 124 IVLDNL--KLDAPKTKEFVTVLKN--LSVSEKALFVTNEADPAVALSARNIPGVKVLTSE 179
Query: 234 TLNLFDILDAETLVLT 249
+N+ D++ L++T
Sbjct: 180 EVNVLDVVAHNKLIVT 195
>gi|193211852|ref|YP_001997805.1| 50S ribosomal protein L4 [Chlorobaculum parvum NCIB 8327]
gi|226730637|sp|B3QR77.1|RL4_CHLP8 RecName: Full=50S ribosomal protein L4
gi|193085329|gb|ACF10605.1| ribosomal protein L4/L1e [Chlorobaculum parvum NCIB 8327]
Length = 208
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 121/202 (59%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ G + GE L+ A + + ++ + + N+R+GT T TR EVRGGG+
Sbjct: 3 LKVLNIQGAETGEVVTLNDDIFAVEVSEHAMYLDVKAILANRRQGTHKTKTRAEVRGGGK 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KPY QK TG AR+GS+R+P+ GGG +FGP+PR + K+N+K K+LA +A++S AAA
Sbjct: 63 KPYRQKGTGNARQGSSRSPIMVGGGTIFGPQPRSYEQKVNRKVKQLARRSALSSKAAAGQ 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSS-RNIGTLKMLT 231
+VVE+F E KT+ + ++ GL +K T L+M +NV +S RNI L +
Sbjct: 123 IVVVEDFS--LESIKTRPVADMLKNLGL--AEKKTLLMMPHYDNVVSTSGRNIEKLNIQV 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+ +DIL+++ ++ + +
Sbjct: 179 ADQASTYDILNSQAVLFQKAAL 200
>gi|332685664|ref|YP_004455438.1| 50S ribosomal protein L4 [Melissococcus plutonius ATCC 35311]
gi|379726738|ref|YP_005318923.1| 50S ribosomal protein L4p [Melissococcus plutonius DAT561]
gi|332369673|dbj|BAK20629.1| LSU ribosomal protein L4p (L1e) [Melissococcus plutonius ATCC
35311]
gi|376317641|dbj|BAL61428.1| 50S ribosomal protein L4p [Melissococcus plutonius DAT561]
Length = 207
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K GE L+ D + VV+ A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GTKNGEMTLNEDIFGIDPNQNVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ +K +RLA+ + ++ A N + VE +
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPRKVRRLAMKSVLSEKVADNNLVAVESLN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTKEF + + +D K ++ + ++N S+RN+ + + T + +++ DI
Sbjct: 131 --FETPKTKEFKQVLANLSIDT--KVLIILEDGNDNAALSARNLPNVSVATSKNVSVLDI 186
Query: 241 LDAETLVLTPSTV 253
+ A LV T + +
Sbjct: 187 VSANKLVATQTAL 199
>gi|350565593|ref|ZP_08934344.1| 50S ribosomal protein L4 [Peptoniphilus indolicus ATCC 29427]
gi|348663600|gb|EGY80162.1| 50S ribosomal protein L4 [Peptoniphilus indolicus ATCC 29427]
Length = 207
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ GE I E L+ + + V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VQVINMNGENISEVELNEEIFDIEVNEHAVYLVVKNILANKRQGTKSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KK +RLA+ + + S
Sbjct: 64 PWRQKGTGRARQGSIRSPQFRGGGVVFAPKPRDFSYTTPKKVRRLALKSVLTSKLRDGEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ KF+ KTK F + + G D +KA + E ++V ++ NI +++ R
Sbjct: 124 IVLDNI--KFDELKTKNFQKMLNAIGAD--KKALVVTAENDKDVVRAGANIANVQISEAR 179
Query: 234 TLNLFDILDAETLVLT 249
+N++D+L +LV+T
Sbjct: 180 NINVYDLLKYNSLVIT 195
>gi|187776577|ref|ZP_02993050.1| hypothetical protein CLOSPO_00091 [Clostridium sporogenes ATCC
15579]
gi|187775236|gb|EDU39038.1| 50S ribosomal protein L4 [Clostridium sporogenes ATCC 15579]
Length = 206
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GEK+G+ L + +H+ + + NKR+GT S TR EV GGG K
Sbjct: 4 VDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GG+VF PKPRD+ + I K K++AI +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRMSIPKSMKKVAIKSALTSKVNEKLM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ D K E PKTKE ++ + D K K + ENV KS+RNI ++++
Sbjct: 124 VVVD--DIKLETPKTKEVVKMLN--AFDAK-KTLIITNNSEENVYKSARNIEGVQIIPVN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++D+L + +V+T V + Y
Sbjct: 179 NINVYDVLKYDKVVITKDAVSKIEEVYA 206
>gi|366089404|ref|ZP_09455877.1| 50S ribosomal protein L4 [Lactobacillus acidipiscis KCTC 13900]
Length = 207
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K GE L+ + VH A++ + R+GT + R VRGGG+KP+ QK T
Sbjct: 11 GSKNGEVELNDTIFGIEPNNNAVHDAVLMQRASLRQGTHAVKNRTAVRGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR GS R+PL GGG +FGP PR ++ K+ +K RLA+ + ++ E+ +VV+ F+
Sbjct: 71 GRARAGSTRSPLWVGGGTIFGPTPRSYAYKLPRKVSRLALKSVLSQKVIDESLVVVDSFE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE+PKTK+F +++ L+ K ++ + +EN +S+RN+ + +L + LN+ ++
Sbjct: 131 --FEQPKTKDFAASLK--SLNVNSKVLVVLEDDNENAARSARNLKNVTVLPAKGLNVLNV 186
Query: 241 LDAETLVLT 249
+D++ +V+T
Sbjct: 187 IDSDKVVIT 195
>gi|333398803|ref|ZP_08480616.1| 50S ribosomal protein L4 [Leuconostoc gelidum KCTC 3527]
gi|406600631|ref|YP_006745977.1| 50S ribosomal protein L4 [Leuconostoc gelidum JB7]
gi|406372166|gb|AFS41091.1| 50S ribosomal protein L4 [Leuconostoc gelidum JB7]
Length = 207
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E LD A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQTAEIELDDAVFAVEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVTEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + +D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSVDT--KTLVVVDEDNENAILSARNLSNVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+ +N+ D+++A+ LV+ S+++ + G +
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQGGF 206
>gi|407978616|ref|ZP_11159445.1| 50S ribosomal protein L4 [Bacillus sp. HYC-10]
gi|407414812|gb|EKF36438.1| 50S ribosomal protein L4 [Bacillus sp. HYC-10]
Length = 207
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G GE L+ + +VV A++ + R+GT TR EVRGGGRK
Sbjct: 4 VALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI + ++S N
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ + KTKEF ++ GL ++KA + + +E + S+RNI + ++ +
Sbjct: 124 IVLEDLT--LDAVKTKEFAGILK--GLSVEKKALIVTADANETIALSARNIPGVTVVEAK 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+++ + L++T + V+
Sbjct: 180 GINVLDVVNHDKLLITKAAVE 200
>gi|317123096|ref|YP_004103099.1| 50S ribosomal protein L4P [Thermaerobacter marianensis DSM 12885]
gi|315593076|gb|ADU52372.1| LSU ribosomal protein L4P [Thermaerobacter marianensis DSM 12885]
Length = 212
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 2/200 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE++GE L A++H+A++ + N+RRGTA+T TRG V GGGRKP+
Sbjct: 6 VYNTRGERVGEIELSETVFGAPVREALMHQAVVRYLANQRRGTAATKTRGMVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GG+VFGP+PRD+S + KK +R A+ +A+++ A IV
Sbjct: 66 RQKGTGRARQGSIRAPHWRKGGIVFGPQPRDYSQALPKKARRAALRSALSAKVADGELIV 125
Query: 176 VEEF-DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
+E + ERP+T+E + R LD K + F++ E + S+RN+ + T
Sbjct: 126 LEGLKELGLERPRTREVAALIERLDLDGK-RPLFVLAEPDPTLYLSARNLPGVDTETVDR 184
Query: 235 LNLFDILDAETLVLTPSTVD 254
LN++ +L +VL VD
Sbjct: 185 LNVYKVLRHGHVVLAREAVD 204
>gi|399055808|ref|ZP_10743458.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
CF112]
gi|433543291|ref|ZP_20499701.1| 50S ribosomal protein L4 [Brevibacillus agri BAB-2500]
gi|398046671|gb|EJL39265.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
CF112]
gi|432185420|gb|ELK42911.1| 50S ribosomal protein L4 [Brevibacillus agri BAB-2500]
Length = 207
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + TG ++GE L + AV++ A++ ++R+GT R EVRGGGRK
Sbjct: 4 VALYNQTGSQVGEIELADSVFGIEPNNAVLYDAIVMQQASQRQGTHDVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR + K+N+K +RLA+ +A+++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSAKVQNNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ + F PKTKE + +D +K + E +NV SSRNI K +
Sbjct: 124 LVLDALN--FAAPKTKEMTAVLNNLKVD--RKVLIVTSEFDQNVALSSRNIPGAKFVDAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D++ + +++T V
Sbjct: 180 GINVLDLVAHDKVIVTKDAV 199
>gi|331268414|ref|YP_004394906.1| 50S ribosomal protein L4 [Clostridium botulinum BKT015925]
gi|329124964|gb|AEB74909.1| ribosomal protein L4/L1e [Clostridium botulinum BKT015925]
Length = 206
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L A + V+H+ ++ + NKR+GT S TR EV GGG+KP+ QK T
Sbjct: 11 GQKVGDLQLAEAVFAVEVNADVLHQVVVAQLANKRQGTQSAKTRAEVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GG+VF PKPR++ + I K +R+A+ +A+ S + +V+E +
Sbjct: 71 GRARQGSIRAPQWIHGGIVFAPKPREYRMAIPKSMRRVAMKSALTSKVNEQELVVLENLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE ++ + + +K +V E +E V KS RNI ++ +N++DI
Sbjct: 131 --LEAPKTKEMVKMINAF---EAKKPLIVVAESNEVVYKSIRNIEGATIVPVNNINVYDI 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L + ++T V + Y
Sbjct: 186 LKHDKFIITKDAVAKIEEVYA 206
>gi|253577180|ref|ZP_04854500.1| 50S ribosomal protein L4/L1 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843424|gb|EES71452.1| 50S ribosomal protein L4/L1 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 207
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L+ + V+H A++ + R GT R EVRGGGRK
Sbjct: 4 VALFNISGSQVGEVELNDAVFGIEPNTHVLHEAVVMQRASLRFGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR +S K+ KK +RLAI +A++S ++
Sbjct: 64 PWKQKGTGRARQGSIRAPQWKGGGTVFGPTPRSYSYKLPKKVRRLAIKSALSSKVIDQDI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++ PKTKEF + L ++KA + + +N+ S+RNI +K +
Sbjct: 124 IVLDAL--AMNAPKTKEFAAILN--NLKVERKALVVAPDYDDNIALSARNIPGVKFVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLTHDKLIITKEAV 199
>gi|300174030|ref|YP_003773196.1| 50S ribosomal protein L4 [Leuconostoc gasicomitatum LMG 18811]
gi|333448294|ref|ZP_08483236.1| 50S ribosomal protein L4 [Leuconostoc inhae KCTC 3774]
gi|299888409|emb|CBL92377.1| 50S ribosomal protein L4 [Leuconostoc gasicomitatum LMG 18811]
Length = 207
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E LD A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAEIELDDAVFAVEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVTEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + +D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSVDT--KTLVVVDEDNENAILSARNLSNVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+ +N+ D+++A+ LV+ S+++ + G +
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQGGF 206
>gi|430748615|ref|YP_007211523.1| 50S ribosomal protein L4 [Thermobacillus composti KWC4]
gi|430732580|gb|AGA56525.1| 50S ribosomal protein L4, bacterial/organelle [Thermobacillus
composti KWC4]
Length = 208
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + +H A++ +RRGT T R EV GGGRK
Sbjct: 4 VAVYNVSGAQVGEIELSDAVFGIEPHVHALHSAIVLQEAAERRGTHKTKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR + K+ KK +RLAI +A+++ A
Sbjct: 64 PWRQKGTGRARQGSIRAPQWKGGGTVFGPLPRTYGFKLPKKVRRLAIRSALSAKVGASEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV++E K +PKTK+F + +D +KA + E +NV S+RNI +K +
Sbjct: 124 IVLDEL--KLAKPKTKDFAGILNNLKVD--RKALVVTAEYDDNVALSARNIPGVKFIAAD 179
Query: 234 TLNLFDILDAETLVLT 249
+N+ D++ + L++T
Sbjct: 180 GINVRDVMVHDKLIMT 195
>gi|389573511|ref|ZP_10163585.1| ribosomal protein L4/L1 family [Bacillus sp. M 2-6]
gi|388426826|gb|EIL84637.1| ribosomal protein L4/L1 family [Bacillus sp. M 2-6]
Length = 207
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G GE L+ + +VV A++ + R+GT TR EVRGGGRK
Sbjct: 4 VALFNQNGSTNGEIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI + ++S N
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E+ + KTKEF ++ GL ++KA + + +E V S+RNI + ++
Sbjct: 124 IVLEDLT--LDAVKTKEFAGILK--GLSVEKKALIVTADANETVALSARNIPGVTVVEAN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+++ + L++T + V+
Sbjct: 180 GINVLDVVNHDKLLITKAAVE 200
>gi|295109478|emb|CBL23431.1| LSU ribosomal protein L4P [Ruminococcus obeum A2-162]
Length = 206
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + G ++G L+ + +VH A++ + N R+GT TR EV GGG
Sbjct: 2 ANVTVYNMEGNEVGTMELNDAVFGVEINEHLVHLAVVRQLANNRQGTQKAKTRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TG AR+GS R P GGGVVF P PRD+ +K+NKKE+R A+ +A+ S
Sbjct: 62 RKPWRQKGTGHARQGSIRAPQWTGGGVVFAPVPRDYEVKMNKKERRAALKSALTSKVQDN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ KTKE + + +KA + +NV S+RNI ++ T
Sbjct: 122 KLVVVDSL--ALAEVKTKEMQKVLTNL---KAEKALIVTAGDDQNVVLSARNIADVQTAT 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
T+N++D++ T+V+T V
Sbjct: 177 VNTINVYDVMKHSTVVVTKDAV 198
>gi|325104867|ref|YP_004274521.1| 50S ribosomal protein L4P [Pedobacter saltans DSM 12145]
gi|324973715|gb|ADY52699.1| LSU ribosomal protein L4P [Pedobacter saltans DSM 12145]
Length = 209
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK Y QK TG AR GS ++PL GGG +FGP+PRD+S K
Sbjct: 41 LANQRQGTHKSKQRNEIAGSTRKLYKQKGTGGARAGSIKSPLFNGGGRIFGPQPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A + +V+E+F+ FE PKTK F+ + L+ + T +V
Sbjct: 101 LNKKLKELARKSALSYKAQGNSILVLEDFN--FETPKTKNFLNLLS--ALNSSNEKTLVV 156
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ E +ENV +SRN+ K++ LN +D+LDA LVLT +V L
Sbjct: 157 LAEGNENVYLASRNLPKAKVVVASDLNTYDVLDAAKLVLTTGSVKTL 203
>gi|293402502|ref|ZP_06646637.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304016|gb|EFE45270.1| ribosomal protein L4/L1 family protein [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 209
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS G+++ E L + + + A++ + R+GT T R EVRGGGRK
Sbjct: 4 MVVLSQAGKELHEITLADTVFGIEPNQQCIFDAIVMQRASMRQGTHDTKNRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGG VFGP PR ++ K+NKK +RLA+ + ++ A
Sbjct: 64 PWRQKGTGRARQGSIRATQWRGGGTVFGPTPRSYAYKLNKKVRRLALKSVLSEKVAENAM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKMLT 231
VV++F+ E PKTK F E + L+ +K F+V E EN S RNI ++ MLT
Sbjct: 124 SVVDKFE--LEAPKTKAFNEIIA--NLNAPRKTLFVVSEGEDFENAFLSMRNIPSMMMLT 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++DI++A +V T + V
Sbjct: 180 ADGLNVYDIVNANKIVFTEAAV 201
>gi|189347702|ref|YP_001944231.1| 50S ribosomal protein L4 [Chlorobium limicola DSM 245]
gi|226730636|sp|B3EGY9.1|RL4_CHLL2 RecName: Full=50S ribosomal protein L4
gi|189341849|gb|ACD91252.1| ribosomal protein L4/L1e [Chlorobium limicola DSM 245]
Length = 208
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ G + GE L+ + D + ++ + + + N+R+GT TR EVRGGGR
Sbjct: 3 LKVLNTGGTETGEVVTLNDEIFGADISEHAMYLDVKSILANRRQGTHKAKTRAEVRGGGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TG AR+GS R+PL GGG +FGP+PR + K+NKK K+LA +A+++ A A
Sbjct: 63 KPFRQKGTGNARQGSTRSPLMIGGGTIFGPQPRSYDQKVNKKVKQLARRSALSAKAQAGQ 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+VVE+F + KTK + ++ GL K K L E + +S RNI L +++
Sbjct: 123 IVVVEDF--RLGEIKTKPVADILKNLGLAEK-KTLMLTPEYDMIIARSGRNIEALNIMSA 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
+ +DILD++ +V + +
Sbjct: 180 EKASTYDILDSQAIVFQKAAL 200
>gi|354585426|ref|ZP_09004313.1| ribosomal protein L4/L1e [Paenibacillus lactis 154]
gi|353188695|gb|EHB54215.1| ribosomal protein L4/L1e [Paenibacillus lactis 154]
Length = 207
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L+ + V+H A++ + RRGT R EVRGGGRK
Sbjct: 4 VALYNVSGSQVGEVELNEAVFGIEPNVHVMHSAVLLQRASLRRGTHKVKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ K+ KK +RLAI +A++S
Sbjct: 64 PWKQKGTGRARQGSIRAPQWKGGGTVFGPTPRSYTFKLPKKVRRLAIKSALSSKVNDNAI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF + L +KA + +NV S+RNI +K +
Sbjct: 124 IVLDQLT--LNAPKTKEFANILSN--LKVGRKALIVAPSYDDNVALSARNIPGVKFVAAD 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + L++T V
Sbjct: 180 GINVLDVLSYDQLIITKEAVQ 200
>gi|365841081|ref|ZP_09382236.1| 50S ribosomal protein L4 [Anaeroglobus geminatus F0357]
gi|364559173|gb|EHM37165.1| 50S ribosomal protein L4 [Anaeroglobus geminatus F0357]
Length = 207
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ TG + GE L+ + AV+ +A++ + N+R GT +T TRG VRGGGRKP+ Q
Sbjct: 8 NITGAQTGEIELNDGVFGVEVNEAVMRQAVLRQLANERLGTHATKTRGLVRGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGG VFGP+PR + K+ +K +RLA+ +A++ V++
Sbjct: 68 KGTGRARVGSTRSPLWVGGGTVFGPQPRSYEQKMPRKARRLAVKSALSDKVNTNELFVLD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
E PKTKE ++ + + ++ + + + + + SRNI +K ++ +N+
Sbjct: 128 EI--VLAAPKTKEVVKVVNNFNFGGEK--VLFITDGDDVMARCSRNIQGVKSVSAEHMNI 183
Query: 238 FDILDAETLVLTPSTV 253
FD+L L +T S V
Sbjct: 184 FDLLHYTKLFITKSAV 199
>gi|381208332|ref|ZP_09915403.1| 50S ribosomal protein L4 [Lentibacillus sp. Grbi]
Length = 208
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G + G+ L+ + V+H A++ + R+GT R E RGGGRKP+
Sbjct: 6 LLKQDGSQAGDVELNDSVFGIEPNTHVLHEAVLMQRASMRQGTHDVKNRSERRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLA+ +A +S +N +V
Sbjct: 66 RQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYKMPKKVRRLALKSAFSSKVQEDNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E F+ PKTKE ++ + +D K + + ENV +S+ N+ +LT +
Sbjct: 126 LENI--AFDAPKTKEIVKMLEALNVD--SKVLIVTADKDENVIRSANNLPNAHVLTVEEI 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ D+L + LV+T D
Sbjct: 182 NVLDLLMHDKLVITKDAAD 200
>gi|116617330|ref|YP_817701.1| 50S ribosomal protein L4 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381335805|ref|YP_005173580.1| 50S ribosomal protein L4 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122272469|sp|Q03ZP4.1|RL4_LEUMM RecName: Full=50S ribosomal protein L4
gi|116096177|gb|ABJ61328.1| LSU ribosomal protein L4P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|356643771|gb|AET29614.1| 50S ribosomal protein L4 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 207
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAEIELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + D +K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSAD--KKTLVVVDEDNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|51894209|ref|YP_076900.1| 50S ribosomal protein L4 [Symbiobacterium thermophilum IAM 14863]
gi|81610342|sp|Q67JU4.1|RL4_SYMTH RecName: Full=50S ribosomal protein L4
gi|51857898|dbj|BAD42056.1| 50S ribosomal protein L4 [Symbiobacterium thermophilum IAM 14863]
Length = 207
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G +GE L + ++H + + NKR+GTA T TR EV GGGRKP+ QK T
Sbjct: 11 GATVGEITLSDAVFGAEVNPGLLHEVVQMYLANKRQGTADTKTRAEVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR GS R+PL GG+VFGP PR++ + KK +R A+ A+++ + IVV++F+
Sbjct: 71 GRARHGSIRSPLWRKGGIVFGPHPREYGWSMPKKARRAALRQALSAKVKSGELIVVDKFE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLTPRTLNLFD 239
E PKT+E ++ +D + F+V + N+ KS+RNI +++ R LN +D
Sbjct: 131 --LEAPKTREVATLLKNLKVD---GSAFIVTAQEDVNIYKSARNIPGVRVNAARNLNAYD 185
Query: 240 ILDAETLVLTPSTV 253
+L A LV T V
Sbjct: 186 VLAASKLVFTQDAV 199
>gi|170754589|ref|YP_001783120.1| 50S ribosomal protein L4 [Clostridium botulinum B1 str. Okra]
gi|226730644|sp|B1IGF3.1|RL4_CLOBK RecName: Full=50S ribosomal protein L4
gi|169119801|gb|ACA43637.1| 50S ribosomal protein L4 [Clostridium botulinum B1 str. Okra]
Length = 206
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GEK+G+ L + +H+ + + NKR+GT S TR EV GGG K
Sbjct: 4 IDLFNQNGEKVGDLQLADSVFGVEVNTYAMHQVVKALLANKRQGTQSAKTRAEVSGGGIK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GG+VF PKPRD+ + I K K++A+ +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWIHGGIVFAPKPRDYRMSIPKSMKKVAMKSALTSKVNEKLM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV+ D K E PKTKE ++ + D K K + ENV KS+RNI ++++
Sbjct: 124 VVVD--DIKLETPKTKEVVKMLN--SFDAK-KTLIITNNAEENVYKSARNIEGVQIIPVN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYG 261
+N++D+L + +V+T V + Y
Sbjct: 179 NINVYDLLKYDKVVITKDAVSKIEEVYA 206
>gi|333396606|ref|ZP_08478423.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392484|ref|ZP_08573883.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
gi|420146293|ref|ZP_14653721.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402024|gb|EJN55423.1| 50S ribosomal protein L4 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 207
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 8/195 (4%)
Query: 61 GEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQK 118
G + G+ L D+ AP+ VV A+I + R+GT + R VRGGGRKP+ QK
Sbjct: 11 GSQNGDVQLNDDIFGIAPNDN--VVFDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQK 68
Query: 119 KTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEE 178
TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++ N IVV+
Sbjct: 69 GTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSQKVIDGNIIVVDA 128
Query: 179 FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLF 238
F FE+PKTK F E+++ LD + KA ++ + ++ ++RN+ + +++ +N+
Sbjct: 129 F--SFEQPKTKLFAESLK--SLDVQTKALVVLEDGNDQAALAARNLPNVSVVSADGINVL 184
Query: 239 DILDAETLVLTPSTV 253
D++ + L+LT + +
Sbjct: 185 DVVANDKLILTQAAL 199
>gi|311070764|ref|YP_003975687.1| 50S ribosomal protein L4 [Bacillus atrophaeus 1942]
gi|419823171|ref|ZP_14346731.1| 50S ribosomal protein L4 [Bacillus atrophaeus C89]
gi|310871281|gb|ADP34756.1| 50S ribosomal protein L4 [Bacillus atrophaeus 1942]
gi|388472702|gb|EIM09465.1| 50S ribosomal protein L4 [Bacillus atrophaeus C89]
Length = 207
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G G+ L+ + +VV A++ + R+G+ R EVRGGGRKP+ QK T
Sbjct: 11 GSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHKVKNRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A++S N +V+E+
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVVDNNIVVLEDLT 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ KTKE ++ GL ++KA + +V+E V S+RNI + ++ +N+ D+
Sbjct: 131 --LDAVKTKEMAAILK--GLSVEKKALIVTADVNETVSLSARNIPGVTVVQADGINVLDV 186
Query: 241 LDAETLVLTPSTVD 254
++ E L++T + V+
Sbjct: 187 VNHEKLLITKAAVE 200
>gi|182418832|ref|ZP_02950097.1| ribosomal protein L4/L1 family [Clostridium butyricum 5521]
gi|237666492|ref|ZP_04526477.1| ribosomal protein, L4/L1 family [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377329|gb|EDT74890.1| ribosomal protein L4/L1 family [Clostridium butyricum 5521]
gi|237657691|gb|EEP55246.1| ribosomal protein, L4/L1 family [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 206
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+K+ + L+ A + + +H+ ++ + NKR+GT ST TR EVRGGG KP+
Sbjct: 6 VYNIEGKKVSDMELNESVFATEVNQYALHQVVVALLANKRQGTQSTKTRSEVRGGGIKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GG+VF PKPRD+ + K +++A+ +A+ S + IV
Sbjct: 66 RQKGTGRARQGSIRAPQWIKGGIVFAPKPRDYRVSTPKSMRKVAMKSALTSKVQDNSMIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E + F+ PKTK + AM P KA + E +E V KS+RNI + ++ +
Sbjct: 126 LESLN--FDAPKTKNVV-AMLNALEAP--KALIITAESNEAVYKSARNIQGVSVIPANNI 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++D+L + +++T V + Y
Sbjct: 181 NVYDLLKFDKVIMTKDAVSKIEEVYA 206
>gi|395801696|ref|ZP_10480951.1| 50S ribosomal protein L4 [Flavobacterium sp. F52]
gi|395435885|gb|EJG01824.1| 50S ribosomal protein L4 [Flavobacterium sp. F52]
Length = 209
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 4/204 (1%)
Query: 54 LPILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ +L F G+ G + L A + V+ + + N+R+GT R EV G R
Sbjct: 3 VKVLDFNGKDTGRKVQLSDSVFAIEPNNHAVYLDVKQYLANQRQGTHKAKERAEVTGSTR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K QK TG AR GS ++PL GGG VFGP+PR +S K+NK KRLA +A + A N
Sbjct: 63 KIKKQKGTGTARAGSVKSPLFKGGGTVFGPRPRSYSFKLNKGLKRLARKSAFSIKAKESN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+VVE+F+ FE P TK FI ++ GL+ K K+ F++ E ++NV SSRN+ ++T
Sbjct: 123 IVVVEDFN--FEAPNTKNFINVLKALGLENK-KSLFVLGESNKNVYLSSRNLKASNVVTS 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFL 256
L+ + IL+A LVL +++ +
Sbjct: 180 SELSTYAILNANNLVLLEGSLELI 203
>gi|385800568|ref|YP_005836972.1| 50S ribosomal protein L4 [Halanaerobium praevalens DSM 2228]
gi|309389932|gb|ADO77812.1| LSU ribosomal protein L4P [Halanaerobium praevalens DSM 2228]
Length = 209
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 80 RAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVV 139
+ VVH+ + + +R G AST TRG+VRGGGRKP+ QK TGRAR GS R+PL GGG+
Sbjct: 30 KHVVHQVVNAQLAARRGGNASTKTRGKVRGGGRKPWRQKGTGRARHGSIRSPLWVGGGIT 89
Query: 140 FGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWG 199
FGP PR + K+ KK +RLA+ + + + I+V++ + ++PKTK + +
Sbjct: 90 FGPSPRSYDKKLTKKMRRLALRSVLTDKVERDELILVDKLE--LDQPKTKAVVNILADLN 147
Query: 200 LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
L+ K K ++ E +N+ S+RNI +K L ++N +D+LD E ++ V +
Sbjct: 148 LEDK-KVVIVMPEKDKNLYLSARNIPKVKTLLAGSINAYDLLDNEMVIFIEEAVKMV 203
>gi|223983922|ref|ZP_03634082.1| hypothetical protein HOLDEFILI_01363 [Holdemania filiformis DSM
12042]
gi|223964114|gb|EEF68466.1| hypothetical protein HOLDEFILI_01363 [Holdemania filiformis DSM
12042]
Length = 209
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+ ALI N R+GT T +R EV GGG+KP+ QK TGRAR+GS R P GGG+ FG
Sbjct: 32 VMFDALIMQRANMRQGTHDTKSRHEVSGGGKKPWRQKGTGRARQGSIRAPQWRGGGIAFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ ++N+K +RLA+ + ++ N +VV+ KF+ KTKEF++ M + +
Sbjct: 92 PTPRSYAYRLNRKVRRLALRSLLSEKVIENNLVVVDAL--KFDAIKTKEFVKVMDAFKFE 149
Query: 202 PKQKATFLVMEVSENVEK---SSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
K T V +++E+ + S RNI +LT LN FDI +A+ LV+T + +
Sbjct: 150 GK---TLFVADIAEDFDNAFMSLRNIPNAALLTVEELNAFDIANAQKLVMTEAAAN 202
>gi|339626626|ref|YP_004718269.1| 50S ribosomal protein L4 [Sulfobacillus acidophilus TPY]
gi|379006078|ref|YP_005255529.1| 50S ribosomal protein L4 [Sulfobacillus acidophilus DSM 10332]
gi|339284415|gb|AEJ38526.1| 50S ribosomal protein L4 [Sulfobacillus acidophilus TPY]
gi|361052340|gb|AEW03857.1| ribosomal protein L4/L1e [Sulfobacillus acidophilus DSM 10332]
Length = 208
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + GE +G+ L + A++H+ ++ N+R GTA+T TR VRGGGRKP+
Sbjct: 6 VYNLAGEVVGQMELSDAVFSVPANPALLHQVIVAYEANRRAGTAATKTRANVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R P GGVVFGP PRD+S+++ +K ++ AI A++ A+ IV
Sbjct: 66 RQKGTGRARAGSTRAPHWRHGGVVFGPHPRDYSVRVPQKMRQAAIRQALSEKLRAQELIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ ++ TK+ + A+ R L+ + F+ E E ++ S+RNI + T ++L
Sbjct: 126 VDSL--ALDQANTKQLVGALDR--LNLGRNVMFITREPIETLKLSARNIKDIHATTTQSL 181
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
+ + +L +VL + V+ + G +G
Sbjct: 182 DAYSLLRYHRVVLDKNAVEAVEGVFG 207
>gi|326203895|ref|ZP_08193757.1| ribosomal protein L4/L1e [Clostridium papyrosolvens DSM 2782]
gi|325985993|gb|EGD46827.1| ribosomal protein L4/L1e [Clostridium papyrosolvens DSM 2782]
Length = 207
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE +G+ L + V+H ++ + NKR+GT ST T+ EVRGGGRK
Sbjct: 4 VDLYNMKGEVVGDIQLCDNVFGAEVNNEVLHAVVVNQLANKRQGTQSTKTKSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GG+V GPKPR + + KK KR+A+ +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRSAQWIKGGIVLGPKPRSYRYTMPKKVKRIAMKSALTSKVSGNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V++ E KTK + + +D A ++ +EN+ KS+RNI +K
Sbjct: 124 FVLDALT--LEAIKTKSMVGVLSNLKVDS--SALIVIDSKNENIVKSARNIPGIKTAYVN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
TLN+FDIL + ++T V+
Sbjct: 180 TLNVFDILKYDKFIITKDAVE 200
>gi|377809992|ref|YP_005005213.1| 50S ribosomal protein L4 [Pediococcus claussenii ATCC BAA-344]
gi|361056733|gb|AEV95537.1| 50S ribosomal protein L4 [Pediococcus claussenii ATCC BAA-344]
Length = 207
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 109/168 (64%), Gaps = 4/168 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFEAVVMQRASMRQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ I KK +RLA+ + ++ E+ +VV+ F+ FE PKTKEF ++ L
Sbjct: 92 PTPRSYAYSIPKKMRRLALKSVLSQKVLDESLVVVDAFN--FEAPKTKEFAGSLS--SLK 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
++KA ++ + +E+ ++RN+ +K+++P +N+ DI+ ++ LV+T
Sbjct: 148 VEKKALIVLEDDNESAVLAARNLANVKIVSPEGINVLDIISSDKLVIT 195
>gi|160932200|ref|ZP_02079591.1| hypothetical protein CLOLEP_01035 [Clostridium leptum DSM 753]
gi|156868802|gb|EDO62174.1| 50S ribosomal protein L4 [Clostridium leptum DSM 753]
Length = 207
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA----PDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+ + TG+++G+ +DL A P+ V+H ++ + N+R+GT S LTR EV G
Sbjct: 4 VAVFDVTGKEVGK--IDLSDAVFGIEPNAV--VMHEVVVNYLANQRQGTQSALTRSEVSG 59
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAA 169
GG+KP+ QK TG AR+GS R P GG+VF PKPR + +NKK +RLA+ +A++S
Sbjct: 60 GGKKPWRQKGTGHARQGSTRAPQWTHGGIVFAPKPRSYRYTVNKKVRRLALKSALSSKVQ 119
Query: 170 AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
E+ +V++ + KT + AM L ++KA ++ V + + KS+ NI +K
Sbjct: 120 EESLVVLDSMTMDAYKTKT---VAAMLN-ALGAEKKALIVLPSVDQKLIKSANNIPGVKT 175
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
T+N++DIL+A+ L++ V
Sbjct: 176 AQVNTINVYDILNADKLIVLKDAV 199
>gi|323342790|ref|ZP_08083022.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066409|ref|YP_004561267.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322463902|gb|EFY09096.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296355|dbj|BAK32226.1| 50S ribosomal protein L4 [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 209
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 8/199 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L IL+ G+ + E L+ + + A++ + R+GT T R EVRGGGRK
Sbjct: 4 LDILNLEGKSLRELELNEAVFGIEPNNQTIFEAVVMQQASLRQGTHKTKNRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR + +N+K +RLA+ +A++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYKYSLNRKVRRLALRSALSQKVMDSEM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK---SSRNIGTLKML 230
VVE E KTKEFI M L+ K T V+ EN++ S RN+ ML
Sbjct: 124 SVVENLT--VENVKTKEFIAVMDALKLNKK---TLFVVSAEENIDNAYLSMRNLSNTMML 178
Query: 231 TPRTLNLFDILDAETLVLT 249
+ LN++DI++ + +V T
Sbjct: 179 DVQGLNVYDIVNCDQIVFT 197
>gi|226309809|ref|YP_002769703.1| 50S ribosomal protein L4 [Brevibacillus brevis NBRC 100599]
gi|254803719|sp|C0ZII1.1|RL4_BREBN RecName: Full=50S ribosomal protein L4
gi|226092757|dbj|BAH41199.1| 50S ribosomal protein L4 [Brevibacillus brevis NBRC 100599]
Length = 207
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + TG ++GE L + AV++ A++ ++R+GT R EVRGGGRK
Sbjct: 4 VALYNQTGSQVGEIDLADSVFGIEPNSAVLYDAIVMQQASQRQGTHDVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR + K+N+K +RLA+ +A+++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSTKVQNNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E + F PKTKE + +D +K + E +NV +SRNI K++
Sbjct: 124 LVLEALN--FAAPKTKEMTAVLSSLKVD--RKVLIVTSEYDQNVALASRNIPGTKIVDAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D++ + +++T V
Sbjct: 180 GINVLDLVAHDKVIVTREAV 199
>gi|330718971|ref|ZP_08313571.1| 50S ribosomal protein L4 [Leuconostoc fallax KCTC 3537]
Length = 207
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 109/178 (61%), Gaps = 4/178 (2%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
AVV A++ R+GT + R V GGG+KP+ QK TGRAR+GS R+P GGGVVF
Sbjct: 31 AVVTDAVLMQRAALRQGTHAVKNRSAVSGGGKKPWKQKGTGRARQGSTRSPQWRGGGVVF 90
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR ++ +IN+K +LA+ +A++ + +VV+ FE PKTK F + + +
Sbjct: 91 GPTPRSYAYRINRKSYQLALKSALSQKVSESKLLVVDALS--FETPKTKAFGQVLANLSV 148
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258
D K +V E ++N S+RN+ ++++T + +N+ D+++A+ LV+ S ++ + G
Sbjct: 149 DS--KVLVIVDEDNDNAILSARNLNNVQVMTAKGINVLDVVNADKLVIVQSAIEEIQG 204
>gi|153952862|ref|YP_001393627.1| 50S ribosomal protein L4 [Clostridium kluyveri DSM 555]
gi|219853527|ref|YP_002470649.1| hypothetical protein CKR_0184 [Clostridium kluyveri NBRC 12016]
gi|189029496|sp|A5N4P8.1|RL4_CLOK5 RecName: Full=50S ribosomal protein L4
gi|254803727|sp|B9DYB0.1|RL4_CLOK1 RecName: Full=50S ribosomal protein L4
gi|146345743|gb|EDK32279.1| RplD [Clostridium kluyveri DSM 555]
gi|219567251|dbj|BAH05235.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 8/211 (3%)
Query: 54 LPILSF---TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+PI+ G+KI + L K + + V+H+ ++ + NKR+GT S TR EV GG
Sbjct: 1 MPIVGLFNKEGQKITDFELSDKVFGVEVNQYVMHQVVVALLANKRQGTQSAKTRAEVSGG 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
G KP+ QK TGRAR+GS R+P GGVVF KPR + I + K +RLA+ +A++S
Sbjct: 61 GIKPWRQKGTGRARQGSIRSPQWIHGGVVFAVKPRSYRISVPKSARRLAMKSALSSKVEE 120
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
+V+E + + PKTKE ++ + + +K + E ++NV KS+RNI + ++
Sbjct: 121 NQIVVLESLE--MDTPKTKEVVKILDAF---EAKKTLIVTAESNQNVYKSARNIQGVSVI 175
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++D+L + L++T V + Y
Sbjct: 176 PVNNLNVYDLLKFDKLIITKDAVSKIEEVYA 206
>gi|221632977|ref|YP_002522200.1| 50S ribosomal protein L4 [Thermomicrobium roseum DSM 5159]
gi|221156742|gb|ACM05869.1| ribosomal protein L4/L1 family [Thermomicrobium roseum DSM 5159]
Length = 212
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H+AL+ + N R GT T TRGEVRGGGRKP+ QK TGRAR+GS R P GGGVV+G
Sbjct: 31 VMHQALVRQLANARAGTHDTKTRGEVRGGGRKPWRQKGTGRARQGSIRAPHWKGGGVVWG 90
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR + ++ KK +RLAI + + S EN IVV E PKTK ++R L
Sbjct: 91 PHPRSYRQEMPKKMRRLAIRS-LLSVKQRENQIVVVRGLTDIE-PKTKVMKGVLQRLPLA 148
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
+ +V + +NV +++ N+ +K+L +N+ D L E ++LTP V+ ++
Sbjct: 149 TARSTLIVVDQRRDNVRRAAGNLEDVKVLVAHNMNIRDGLKYERMILTPEAVEVIH 204
>gi|118444236|ref|YP_877199.1| 50S ribosomal protein L4 [Clostridium novyi NT]
gi|166234658|sp|A0PXU7.1|RL4_CLONN RecName: Full=50S ribosomal protein L4
gi|118134692|gb|ABK61736.1| ribosomal protein L4/L1 family [Clostridium novyi NT]
Length = 206
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 5/206 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+K+G+ L A + V+H+ ++ + NKR+G S TR EV GGG+KP+
Sbjct: 6 LYNIEGQKVGDLQLAETVFAVEVNEDVLHQVVVAQLANKRQGNQSAKTRAEVSGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGVVF PKPRD+ + I K +R+A+ +A+ S +V
Sbjct: 66 RQKGTGRARQGSIRAPQWIHGGVVFAPKPRDYKMSIPKSMRRVAMKSALTSKVNENELVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E + + PKTKE ++ + + +K +V E +E + KS RNI ++ +
Sbjct: 126 LESLE--LDAPKTKEMVKMINAF---EGKKPLIVVPESNEVIYKSVRNIEGATVVPVNNI 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++DIL + ++T V + Y
Sbjct: 181 NVYDILKHDKFIITKEAVSKIEEVYA 206
>gi|299820956|ref|ZP_07052845.1| ribosomal protein L4/L1 family protein [Listeria grayi DSM 20601]
gi|299817977|gb|EFI85212.1| ribosomal protein L4/L1 family protein [Listeria grayi DSM 20601]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G GE L+ + VV +++ + R+GT R EVRGGGRK
Sbjct: 4 LSLLKQDGTSAGEITLNDAVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ +K +RLAI +A++S EN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPRKVRRLAIKSALSSKVKEENL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTK+F ++ +D KA +V S+NVE S+RN+ + ++
Sbjct: 124 LVLENL--AFDAPKTKDFAAFLKNISVD--TKALVVVAGESDNVELSARNLQGITVIPAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
++++ ++ + L++T + V+
Sbjct: 180 SISVLEVASHDKLIITKAAVE 200
>gi|52078610|ref|YP_077401.1| 50S ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319649115|ref|ZP_08003323.1| 50S ribosomal protein L4 [Bacillus sp. BT1B_CT2]
gi|404487480|ref|YP_006711586.1| 50S ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680509|ref|ZP_17655348.1| 50S ribosomal protein L4 [Bacillus licheniformis WX-02]
gi|81667231|sp|Q65PA6.1|RL4_BACLD RecName: Full=50S ribosomal protein L4
gi|52001821|gb|AAU21763.1| ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346474|gb|AAU39108.1| 50S ribosomal protein L4 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317388815|gb|EFV69634.1| 50S ribosomal protein L4 [Bacillus sp. BT1B_CT2]
gi|383441615|gb|EID49324.1| 50S ribosomal protein L4 [Bacillus licheniformis WX-02]
Length = 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 109/174 (62%), Gaps = 4/174 (2%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
+VV A++ + R+GT R EVRGGGRKP+ QK TGRAR+GS R+P GGG+VF
Sbjct: 31 SVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVF 90
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR ++ K+ KK +RLAI +A++S N IV+E+ + + KTKE ++ GL
Sbjct: 91 GPTPRSYAYKLPKKVRRLAIKSALSSKVNDNNLIVLEDLN--LDAVKTKEMAAILK--GL 146
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
++KA + + +E VE S+RN+ + ++ +N+ D++ E LV+T + V+
Sbjct: 147 SIEKKALIVTADANETVELSARNLPGVTVVEANGINVLDVVGHEKLVMTKAAVE 200
>gi|408420929|ref|YP_006762343.1| 50S ribosomal protein L4 RplD [Desulfobacula toluolica Tol2]
gi|405108142|emb|CCK81639.1| RplD: 50S ribosomal protein L4 [Desulfobacula toluolica Tol2]
Length = 206
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 127/212 (59%), Gaps = 11/212 (5%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ GEK+ ET L + +V+H+ + + + KR GTA++ TRG V+G
Sbjct: 2 ATVDVLNSAGEKVSETQLPDEIFKTSVKTSVLHQVVRSQLVAKREGTAASKTRGMVKGST 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RK + QK TG AR GS ++PLR GGGV+FGP R ++IK+ KK ++LA+ A+ S+ E
Sbjct: 62 RKLFRQKGTGNARAGSIKSPLRKGGGVIFGPSQRSFAIKVPKKVRKLALKMAL-SSKVEE 120
Query: 172 NTI-VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLK 228
NTI V+++F+ E KTK+ ++ L + L++ SE N+ S+RNI +K
Sbjct: 121 NTITVIDDFN--LETIKTKDLANVLKTLSL-----SNLLIVSDSEDTNLLLSARNIPDIK 173
Query: 229 MLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
++ LN++DIL + L+L S++ + GR
Sbjct: 174 VIKTEGLNVYDILKFKNLLLVESSIKNIEGRL 205
>gi|420157782|ref|ZP_14664610.1| 50S ribosomal protein L4 [Clostridium sp. MSTE9]
gi|394755610|gb|EJF38809.1| 50S ribosomal protein L4 [Clostridium sp. MSTE9]
Length = 207
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G+++G+ L + AV+H + + N+R+GT S LTR EV GGGRK
Sbjct: 4 VAVLDMAGKEVGQIELSEAVFGIEPNVAVMHELVKNYLANQRQGTQSALTRSEVAGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGVVF PKPRD+ +NKK +RLA+ +A +S
Sbjct: 64 PWRQKGTGHARQGSIRAPQWRHGGVVFAPKPRDYRYTVNKKVRRLAMKSAFSSKVIDNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+++ + KTK + ++ L ++KA ++ E ++ V S+ N+ +K T
Sbjct: 124 VVLDQI--AMDEYKTKVIVSMLQ--ALGAEKKALIVLPEENKKVIASAANLQGVKTATVN 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
TLN++DIL+A+ ++ V
Sbjct: 180 TLNVYDILNADKFIVLKDAV 199
>gi|119358190|ref|YP_912834.1| 50S ribosomal protein L4 [Chlorobium phaeobacteroides DSM 266]
gi|166234653|sp|A1BJ33.1|RL4_CHLPD RecName: Full=50S ribosomal protein L4
gi|119355539|gb|ABL66410.1| LSU ribosomal protein L4P [Chlorobium phaeobacteroides DSM 266]
Length = 208
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ +G + GE L+ + + + ++ + + + NKR+GT TR +VRGGGR
Sbjct: 3 LKVLNTSGTETGEVVTLNEEIFGVEVSEHAMYLDVKSILANKRQGTHKAKTRAQVRGGGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KPY QK TG AR+GS R+PL GGG +FGP+PR + K+NKK K LA +A+++ A A
Sbjct: 63 KPYRQKGTGNARQGSTRSPLMIGGGTIFGPQPRSYDQKVNKKVKLLARRSALSAKAKAGK 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+V+E+F + + KTK E ++ GL+ K K L E + +S RNI L ++T
Sbjct: 123 ILVIEDF--RLDAIKTKPVAEILKNLGLEQK-KILMLTPEYDMIIARSGRNIPVLNIMTA 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
++ +DIL++ ++ + +
Sbjct: 180 DKVSTYDILNSSAILFQKTAL 200
>gi|403071308|ref|ZP_10912640.1| 50S ribosomal protein L4 [Oceanobacillus sp. Ndiop]
Length = 207
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H A++ + R+GT + R +VRGGGRKP+ QK TGRAR+GS R+P GGGVVFG
Sbjct: 32 VLHEAVVMQRASMRQGTHAVKNRSDVRGGGRKPWRQKGTGRARQGSIRSPQWVGGGVVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR +S K+ KK +RLA+ +A++S ++ +V++ + PKTKE I+ + +D
Sbjct: 92 PTPRSYSYKLPKKVRRLALKSALSSKVKEDSLLVLDSI--AMDAPKTKEVIKMLDALNVD 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
K ++ + E V +S+ N+ ++K+LT +N+ D+L + L+++ D
Sbjct: 150 T--KVLIVLADKDETVIRSANNLQSVKVLTVEEMNVLDLLTHDKLIISKDAAD 200
>gi|288574663|ref|ZP_06393020.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570404|gb|EFC91961.1| ribosomal protein L4/L1e [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 206
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 9/209 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ +++ TGE GE L L D V +H+ ++ + N+R+GT T RG+VRGGG
Sbjct: 4 IKLVTITGESTGE--LSLSGNVFDVPLHVPAMHQVVVAQLANRRQGTHCTKGRGDVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR GS+R+P+ GGGV GPKPR++ K+NKK +RLAI +A++
Sbjct: 62 KKPWRQKHTGRARHGSSRSPIWVGGGVTHGPKPRNYRQKVNKKVRRLAICSALSQKIRDA 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ E F E+P TK + G++ K +V EN+ S+RNI +L
Sbjct: 122 QLMGFEAFS--MEKPSTKIMKGLFQSLGVE---KPLVIVDHRDENISMSTRNIPGADVLH 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRY 260
++N++D+L + ++ V L Y
Sbjct: 177 VDSINVYDLLKHGHVFISAGAVKKLEEVY 205
>gi|429765123|ref|ZP_19297425.1| 50S ribosomal protein L4 [Clostridium celatum DSM 1785]
gi|429186866|gb|EKY27795.1| 50S ribosomal protein L4 [Clostridium celatum DSM 1785]
Length = 206
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G KI + L+ K A + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GNKIEDIQLNDKVFAVEVNADAMHQVVVALLANKRQGTQSAKTRAEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ + I K +R+A+ +A+ S + IV++
Sbjct: 71 GRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRRVAMLSALTSKVQNDEMIVLDSLT 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTKE ++ + + +K + E +E V KS+RNI +++L +N++D+
Sbjct: 131 --LEAPKTKEVVKMLNAFN---AKKTLIVTAESNEVVYKSARNIEGVEVLPVNNINVYDL 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L +++T V + Y
Sbjct: 186 LKYPKVIMTKDAVSKIEEVYA 206
>gi|399516370|ref|ZP_10757977.1| LSU ribosomal protein L4p (L1e) [Leuconostoc pseudomesenteroides
4882]
gi|398648814|emb|CCJ66004.1| LSU ribosomal protein L4p (L1e) [Leuconostoc pseudomesenteroides
4882]
Length = 207
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAEIELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPTPRSYAYRINRKAYQLALKSVLSQKVADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSADT--KTLVVVDEDNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|168187813|ref|ZP_02622448.1| ribosomal protein L4/L1 family [Clostridium botulinum C str.
Eklund]
gi|169294356|gb|EDS76489.1| ribosomal protein L4/L1 family [Clostridium botulinum C str.
Eklund]
Length = 206
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+K+G+ L A + V+H+ ++ + NKR+G S TR EV GGG+KP+ QK T
Sbjct: 11 GQKVGDLQLADTVFAVEVNEDVLHQVVVAQLANKRQGNQSAKTRAEVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ + I K +R+A+ +A+ S + +V+E +
Sbjct: 71 GRARQGSIRAPQWIHGGVVFAPKPRDYKMSIPKSMRRVAMKSALTSKVNEKELVVLESLE 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ PKTKE ++ + + +K +V E +E + KS RNI ++ +N++DI
Sbjct: 131 --LDAPKTKEMVKMINAF---ESKKPLIVVPESNEVIYKSVRNIEGATVVPVNNINVYDI 185
Query: 241 LDAETLVLTPSTVDFLNGRYG 261
L + ++T V + Y
Sbjct: 186 LKHDKFIITKEAVSKIEEVYA 206
>gi|194335446|ref|YP_002017240.1| 50S ribosomal protein L4 [Pelodictyon phaeoclathratiforme BU-1]
gi|194307923|gb|ACF42623.1| ribosomal protein L4/L1e [Pelodictyon phaeoclathratiforme BU-1]
Length = 212
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 19/186 (10%)
Query: 68 YLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGS 127
YLD+KS + N+R+GT + TRGEVRGGGRKP QK TG AR+GS
Sbjct: 38 YLDVKSI----------------LANRRQGTHKSKTRGEVRGGGRKPLRQKGTGNARQGS 81
Query: 128 NRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPK 187
+R+PL GGG +FGP P + K+NKK K LA +A++S A A +V+E+F FE K
Sbjct: 82 SRSPLNIGGGTIFGPVPHAYDQKVNKKVKLLARRSALSSKAKAGQIVVIEDF--VFENIK 139
Query: 188 TKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLV 247
TK F + ++ GL K K L + +S +NI L ++T + +DIL + TL+
Sbjct: 140 TKPFAQILKNLGLAEK-KTLMLTPGYDLIIARSGKNIAALNIMTADKASTYDILHSHTLL 198
Query: 248 LTPSTV 253
+ + +
Sbjct: 199 VQKTAL 204
>gi|326692236|ref|ZP_08229241.1| 50S ribosomal protein L4 [Leuconostoc argentinum KCTC 3773]
Length = 207
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAELELNDAVFAIEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPTPRSYAYRINRKSYQLALKSVLSQKLADG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + +D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSVDT--KTLVVVDEDNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|283794898|ref|YP_003359251.1| ribosomal protein L4 [Cryptomonas paramecium]
gi|253981870|gb|ACT46787.1| ribosomal protein L4 [Cryptomonas paramecium]
Length = 214
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 8/183 (4%)
Query: 69 LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSN 128
L+LK+ A + ++ HR L +N+R TA + TR EVRGGGRKP+ QK TGRAR GS+
Sbjct: 26 LNLKTCA-EVSKFFFHRILTIQNKNQRCKTACSKTRAEVRGGGRKPWKQKGTGRARAGSS 84
Query: 129 RTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKT 188
+PL GGGVVFGPKP ++ KIN KE++LAI T + A + ++V F +P+T
Sbjct: 85 VSPLWKGGGVVFGPKPTVYNKKINFKERQLAIFTGL--YACSYKIVIVRNFVSSIAQPRT 142
Query: 189 KEFIEAMRRWGLDP---KQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAET 245
K F+ + DP ++ LV + +E + S RN+ + + + +TL L DI A++
Sbjct: 143 KAFLGLLS--SFDPSLLSKRILILVPKATETLYSSCRNVEKITIGSRKTLTLRDIFLADS 200
Query: 246 LVL 248
+++
Sbjct: 201 ILI 203
>gi|239787564|emb|CAX84032.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 217
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 85 RALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKP 144
R + + +R GTAST RGEVRGGG KPY QK TG AR+G+ R P GGVVFGP P
Sbjct: 35 RVVHYQLAKRRLGTASTKRRGEVRGGGHKPYRQKGTGNARQGTIRAPQYRTGGVVFGPHP 94
Query: 145 RDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQ 204
RD+S+K+N+KE+ L + TA+++ AE IV+ +F KT+ ++ + R L+
Sbjct: 95 RDYSVKMNRKERALGLRTALSAKREAEELIVLTDFG--LTEIKTRSMLQVLTR--LNAAN 150
Query: 205 KATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
++ E E +E+S+RN+ + ++ +N++D+L E L++T + + L R
Sbjct: 151 SVLIVLPESDERIERSARNLPGVDVIQVDGVNVYDLLVHEKLLMTEAALQKLEAR 205
>gi|312144246|ref|YP_003995692.1| 50S ribosomal protein L4 [Halanaerobium hydrogeniformans]
gi|311904897|gb|ADQ15338.1| ribosomal protein L4/L1e [Halanaerobium hydrogeniformans]
Length = 209
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 5/176 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VVH+ + + +R GTAST R VRGGGRKP+ QK TGRAR GS R+PL GGGV FG
Sbjct: 32 VVHQVVNAQLAARRSGTASTKNRANVRGGGRKPWRQKGTGRARHGSIRSPLWVGGGVTFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR + K+ KK KRLA+ + + + ++V++ PKTK I+ + L+
Sbjct: 92 PSPRSYDKKLTKKMKRLALKSVLTDKVNRDEVVLVDKI--ALSEPKTKAVIKILADLNLE 149
Query: 202 PKQKATFLVM-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K+ +VM E +N+ S+RNI +K L ++N +D+LD E ++ V +
Sbjct: 150 DKK--VLIVMPEKDDNLYLSARNIPNVKTLLAGSINAYDLLDNEMIIFIEEAVKMI 203
>gi|347534782|ref|YP_004841452.1| 50S ribosomal protein L4 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504838|gb|AEN99520.1| 50S ribosomal protein L4 [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 207
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV ++ ++R+GT +RG+V GGG+KP+ QK TGRAR+GS R+P GGGVVFG
Sbjct: 32 VVFDTVVMQRASQRQGTNGVKSRGQVSGGGKKPWRQKGTGRARQGSIRSPQWVGGGVVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P R +S + KK RLA+ + ++ + +N +VV+ + F+ PKTKEF ++ LD
Sbjct: 92 PTSRSYSYHLPKKVTRLAVKSVLSEKVSEDNFVVVDSIN--FDAPKTKEFANLLKN--LD 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K ++ ++++NV +S++NI +++++ + +N D+L+A+ +V+T + +
Sbjct: 148 AATKTLVVLEDINDNVARSAKNIPNVQVISAKGVNTLDVLNAKKVVITKAAL 199
>gi|289435897|ref|YP_003465769.1| hypothetical protein lse_2536 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422423360|ref|ZP_16500313.1| ribosomal protein L4/L1 family [Listeria seeligeri FSL S4-171]
gi|289172141|emb|CBH28687.1| rplD [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313636112|gb|EFS01986.1| ribosomal protein L4/L1 family [Listeria seeligeri FSL S4-171]
Length = 207
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G GE L+ + VV +++ + R+GT R EVRGGGRK
Sbjct: 4 LSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLAI + ++S E
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTKEF ++ +D KA +V SENVE S+RN+ + ++
Sbjct: 124 VVLEGLT--FDAPKTKEFAAFLKNISVD--TKALIVVASESENVELSARNLQGITVIPAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
++++ ++ + L++T + V+
Sbjct: 180 SISVLEVAKHDKLIITKAAVE 200
>gi|145219062|ref|YP_001129771.1| 50S ribosomal protein L4 [Chlorobium phaeovibrioides DSM 265]
gi|189042879|sp|A4SCR0.1|RL4_PROVI RecName: Full=50S ribosomal protein L4
gi|145205226|gb|ABP36269.1| LSU ribosomal protein L4P [Chlorobium phaeovibrioides DSM 265]
Length = 208
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 104/181 (57%), Gaps = 19/181 (10%)
Query: 68 YLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGS 127
YLD+KS + N+R+GT + TR EVRGGGRKPY QK TG AR+GS
Sbjct: 34 YLDVKSI----------------LANRRQGTHKSKTRAEVRGGGRKPYRQKGTGNARQGS 77
Query: 128 NRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPK 187
R+PL GGG +FGP P + K+NKK K LA +A +S A +VVE+F K + K
Sbjct: 78 TRSPLMVGGGTIFGPTPHGYDQKVNKKVKALARRSAFSSKAQDGRILVVEDF--KLDEIK 135
Query: 188 TKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLV 247
TK F ++ GLD K K L E + + +S +NI T+ +++ + +DIL++ T++
Sbjct: 136 TKPFAAILKNLGLDEK-KTLMLTPEYNVIITRSGKNIQTVNIMSAEKASTYDILNSHTVL 194
Query: 248 L 248
Sbjct: 195 F 195
>gi|300814627|ref|ZP_07094878.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511246|gb|EFK38495.1| 50S ribosomal protein L4 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 207
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 4/205 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +++ G + E ++ D VV+ + + N+R+GT S TR EVRGGG
Sbjct: 2 AKIQMINIEGNPVSEIEVNDNIFNCDVNEHVVYLVVKNILANRRQGTHSAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGGVVF KPRD+S KK +RLA+ + + S
Sbjct: 62 RKPWRQKGTGRARQGSIRSPQFRGGGVVFAKKPRDYSYTTPKKVRRLALKSVLTSKLQDS 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV+++ + KTK + ++ D +KA ++ + +EN+ +SSRNI +K
Sbjct: 122 EIIVLDKLE--LNEIKTKTVVNILKDIKAD--KKALIVINDKNENIIRSSRNIEGVKTEF 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFL 256
+ +N++D+L +LV+T +D L
Sbjct: 178 VKNINVYDLLKYNSLVITKDALDTL 202
>gi|317050529|ref|YP_004111645.1| 50S ribosomal protein L4/L1e [Desulfurispirillum indicum S5]
gi|316945613|gb|ADU65089.1| ribosomal protein L4/L1e [Desulfurispirillum indicum S5]
Length = 207
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 118/204 (57%), Gaps = 4/204 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +++ EK+GE L + ++H ++ + +R+GT + R V GGG K
Sbjct: 4 VSVINVNNEKVGEVALSDELFGGAVKPHLMHEVVVAQLAARRQGTHAVKNRSAVSGGGSK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR G++R+PL GGV+FGP PR + K+NKK +R A+ +A++ AA ++
Sbjct: 64 PWRQKGTGRARAGTSRSPLWRTGGVIFGPTPRSYEKKVNKKVRRQALVSALSEKAAQQSI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V ++F E PKTK + + LD +K F+V E+ + RN+ +K++ P
Sbjct: 124 VVFDDF--ALESPKTKLANQVFAKCSLD--RKVLFVVDEMDSPKALAMRNLPFVKLIKPE 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLN 257
LN++D+++A+ L ST + L+
Sbjct: 180 GLNVYDVVNAKVLAFEKSTAERLS 203
>gi|376259803|ref|YP_005146523.1| 50S ribosomal protein L4 [Clostridium sp. BNL1100]
gi|373943797|gb|AEY64718.1| 50S ribosomal protein L4, bacterial/organelle [Clostridium sp.
BNL1100]
Length = 207
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE +G+ L + V+H ++ + NKR+GT ST T+ EVRGGG+K
Sbjct: 4 VDLYNMKGEVVGDIQLCDNVFGAEVNNEVLHAVVVNQLANKRQGTQSTKTKSEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GG+V GPKPR + + KK KR+A+ +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRSAQWIKGGIVLGPKPRSYRYTMPKKVKRIAMKSALTSKVSGNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V++ E KTK + + +D A ++ +EN+ KS+RNI +K
Sbjct: 124 FVLDALT--LEAIKTKSMVGVLNNLKVDS--SALIVIDSKNENIVKSARNIPGIKTAYVN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
TLN+FDIL + ++T V+
Sbjct: 180 TLNVFDILKYDKFIITKDAVE 200
>gi|162446958|ref|YP_001620090.1| 50S ribosomal protein L4 [Acholeplasma laidlawii PG-8A]
gi|189029489|sp|A9NED4.1|RL4_ACHLI RecName: Full=50S ribosomal protein L4
gi|161985065|gb|ABX80714.1| large subunit ribosomal protein L4 [Acholeplasma laidlawii PG-8A]
Length = 207
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + GEKI E L+ + V++ + R+GTA T TR EVRGGG+K
Sbjct: 4 LNLFNQAGEKISEVALNDAIFGITPNQQVLYDVVNAQRAALRQGTAKTKTRAEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +++K+N+K K+LA+ +A++ AEN
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPIPRSYAVKVNQKVKQLALKSALSYHVLAENL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
++V+ PKTK FIE M LD ++ LV V +N+ +S N+ +
Sbjct: 124 VLVDNIT--VAEPKTKLFIEIMNNLKLD--DRSIVLVDSVDKNLLLASNNLPGAVVREVS 179
Query: 234 TLNLFDILDAETLVLTPSTVDF 255
++++++L + +VLT V +
Sbjct: 180 QVSVYELLKFKQVVLTQGAVKY 201
>gi|375147900|ref|YP_005010341.1| 50S ribosomal protein L4 [Niastella koreensis GR20-10]
gi|361061946|gb|AEW00938.1| ribosomal protein L4/L1e [Niastella koreensis GR20-10]
Length = 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 54 LPILSFTGEKIGETYL---DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+ +LS G K G + D+ A P+ VV+ A+ + +R+GT TR EV+G
Sbjct: 3 VDVLSIKGAKTGRSVDLADDIFGAEPNNH--VVYLAVKQYLAAQRQGTHKVKTRLEVKGS 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
+K + QK TG +R+G+ R PL GGG +FGPKPRD+ K+N+K K LA +A+ S A
Sbjct: 61 SKKLHRQKGTGGSRKGNLRNPLFKGGGTIFGPKPRDYDFKLNRKVKDLAKISAL-SDKAK 119
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
EN IVV E D PKTK+F+E M +D K KA ++ E +EN++KS RNI +
Sbjct: 120 ENAIVVVE-DINLAAPKTKQFVEIMAALKIDNK-KALVILPEYNENLQKSVRNIPNALGI 177
Query: 231 TPRTLNLFDILDAETLVLTPST 252
+N +DI++A+ L+ T +T
Sbjct: 178 QFADINTYDIVNADVLLFTETT 199
>gi|269925832|ref|YP_003322455.1| 50S ribosomal protein L4 [Thermobaculum terrenum ATCC BAA-798]
gi|269789492|gb|ACZ41633.1| ribosomal protein L4/L1e [Thermobaculum terrenum ATCC BAA-798]
Length = 223
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 3/203 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
LP+ + G+ + + + AV+H+AL+ + N R GT T TR EV GGGRK
Sbjct: 3 LPVYNLNGDIVSQLEVSDLVFGIQPNLAVMHQALVRQLANARTGTHDTRTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVFGP PR + ++ +K +RLA+ +A++ A E
Sbjct: 63 PWRQKGTGRARQGSIRAPQWRGGGVVFGPHPRSYEQRMPRKMRRLALRSALSQKVAEERL 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VV + E P+TK I A+ + GL QK +E+V+K+ N+ +K++
Sbjct: 123 LVVTGLS-EIE-PRTKAMIAALEKLGL-AGQKVLIATNGRNESVQKAGSNLPNVKVIHAS 179
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
LN+ D+L + L L V+ L
Sbjct: 180 NLNIADLLKYDYLFLEDGAVNSL 202
>gi|170017942|ref|YP_001728861.1| 50S ribosomal protein L4 [Leuconostoc citreum KM20]
gi|414597678|ref|ZP_11447239.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE E16]
gi|421876144|ref|ZP_16307704.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C10]
gi|421878523|ref|ZP_16310003.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C11]
gi|226730683|sp|B1MW13.1|RL4_LEUCK RecName: Full=50S ribosomal protein L4
gi|169804799|gb|ACA83417.1| 50S ribosomal protein L4 [Leuconostoc citreum KM20]
gi|372558179|emb|CCF23824.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C10]
gi|390447650|emb|CCF26123.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE C11]
gi|390481589|emb|CCF29300.1| 50S ribosomal protein L4 [Leuconostoc citreum LBAE E16]
Length = 207
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAELELNDAVFAIEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPTPRSYAYRINRKAYQLALKSVLSQKVAEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + +D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSVDT--KTLVVVDEDNENAILSARNLTNVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|332298912|ref|YP_004440834.1| 50S ribosomal protein L4/L1e [Treponema brennaborense DSM 12168]
gi|332182015|gb|AEE17703.1| ribosomal protein L4/L1e [Treponema brennaborense DSM 12168]
Length = 210
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ LD K V++ A+ ++ NKR GTA T R EV G KPY
Sbjct: 5 VYSVDGKELRTITLDDKVFGLPVNEDVIYYAINNELANKRVGTACTKDRSEVHGSNAKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRARRG ++PL GGGV+FGPKPRD+S + KK KRLA+ + ++ A + V
Sbjct: 65 KQKGTGRARRGDKKSPLCRGGGVIFGPKPRDFSFVLPKKVKRLAMKSILSLKAQGDRLTV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLTPRT 234
+E+F E KTK+ + ++ + P T +V++ + N++++ RNI + L+
Sbjct: 125 IEDF--TVESGKTKDLVAILKNF---PSDGRTVIVLKDDDANIKQAGRNIPAVSFLSYNR 179
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRYG 261
L D+ +++ S V L+G YG
Sbjct: 180 LRAHDLFYGRKVIMLESAVKNLSGFYG 206
>gi|339498612|ref|ZP_08659588.1| 50S ribosomal protein L4 [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 207
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAEIELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + + A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPTPRSYAYRINRKAYQLALKSVFSQKVADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSADT--KTLVVVDEDNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|297569421|ref|YP_003690765.1| ribosomal protein L4/L1e [Desulfurivibrio alkaliphilus AHT2]
gi|296925336|gb|ADH86146.1| ribosomal protein L4/L1e [Desulfurivibrio alkaliphilus AHT2]
Length = 207
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 5/204 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + EK+G+ LD + ++H + N+R GTA T TR +V G G+KP+
Sbjct: 6 VYNIKKEKVGDVELDDALFGVEVNPHLLHDIVRMQRANRRAGTACTKTRKDVSGSGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS ++P+ GGG VFGP+PR ++ + +K ++L + A++S A +V
Sbjct: 66 RQKGTGRARAGSRKSPVWRGGGTVFGPRPRSYAFSMPRKARKLGLRMALSSRCADNLLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++F + + KTK+F+E M + +D A +V E E +E+SSRN+ K++ L
Sbjct: 126 LDDF--QLDEIKTKKFVEVMDGFSID---NALIVVPESIETLERSSRNVPGFKVMPTEGL 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGR 259
N++DIL + +VL ++ L R
Sbjct: 181 NVYDILLHKHIVLLQPCIEQLRER 204
>gi|154249816|ref|YP_001410641.1| 50S ribosomal protein L4 [Fervidobacterium nodosum Rt17-B1]
gi|171769378|sp|A7HM51.1|RL4_FERNB RecName: Full=50S ribosomal protein L4
gi|154153752|gb|ABS60984.1| ribosomal protein L4/L1e [Fervidobacterium nodosum Rt17-B1]
Length = 223
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 17/216 (7%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + GEKIG + + + V+ R + + N R GTAST TRGEV GGG
Sbjct: 2 AQVTLYNIKGEKIGNIEIADEVFNVEPNLDVMWRYIDMQLTNSRAGTASTKTRGEVAGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R GGV GPKPR++ ++NKK K+LA+ +A+++
Sbjct: 62 RKPWPQKHTGRARQGSIRAIHWRHGGVAHGPKPRNYLKRLNKKMKKLALKSALSARFQEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV---MEVSENVEKSSRNIGTLK 228
N IVV D +FE+ +TK+ E ++ G+ +K F++ EV ENV+ S RNI +K
Sbjct: 122 NLIVVS--DIRFEKAQTKQMREVLKNLGI-ADEKVLFVLPRKEEVYENVKLSGRNIPGVK 178
Query: 229 MLTPRT-----------LNLFDILDAETLVLTPSTV 253
++ LN++DI+++ +VLT TV
Sbjct: 179 VIIADNPNNGNPVNIDGLNVYDIINSSKVVLTEGTV 214
>gi|39938687|ref|NP_950453.1| ribosomal protein L4 [Onion yellows phytoplasma OY-M]
gi|46577157|sp|P61067.1|RL4_ONYPE RecName: Full=50S ribosomal protein L4
gi|39721796|dbj|BAD04286.1| ribosomal protein L4 [Onion yellows phytoplasma OY-M]
Length = 207
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 119/199 (59%), Gaps = 10/199 (5%)
Query: 59 FTGEKI-GETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
F EK+ T D+K P+ + V++ + R+GT +T TR V GGG+KP+ Q
Sbjct: 13 FVSEKVLATTVFDIK---PN--QQVLYDVVNAQRAAMRQGTHATKTRALVAGGGKKPWRQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGGV FGP PRD+S+K+N+K + LA+ +A++ A +VV+
Sbjct: 68 KGTGRARHGSIRSPLWRGGGVTFGPSPRDYSVKVNQKVRSLALKSALSLQAKNNQLVVVD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
+ KTK+F + +++ L+ K+ +V +++E + +SRN+ + + T ++
Sbjct: 128 NIN--LATHKTKDFQQMLQK--LNITSKSLIVVTQMTEQLALASRNLSYITLETASHASV 183
Query: 238 FDILDAETLVLTPSTVDFL 256
+ IL+ + LVLT + V++
Sbjct: 184 YQILNCKQLVLTAAAVNYF 202
>gi|16801841|ref|NP_472109.1| 50S ribosomal protein L4 [Listeria innocua Clip11262]
gi|16804669|ref|NP_466154.1| 50S ribosomal protein L4 [Listeria monocytogenes EGD-e]
gi|46908803|ref|YP_015192.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
F2365]
gi|217966170|ref|YP_002351848.1| 50S ribosomal protein L4 [Listeria monocytogenes HCC23]
gi|226225176|ref|YP_002759283.1| ribosomal protein L4 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254825008|ref|ZP_05230009.1| ribosomal protein L4 [Listeria monocytogenes FSL J1-194]
gi|254829080|ref|ZP_05233767.1| ribosomal protein L4 [Listeria monocytogenes FSL N3-165]
gi|254854163|ref|ZP_05243511.1| ribosomal protein L4 [Listeria monocytogenes FSL R2-503]
gi|254912876|ref|ZP_05262888.1| 50S ribosomal protein L4 [Listeria monocytogenes J2818]
gi|254931099|ref|ZP_05264458.1| ribosomal protein L4 [Listeria monocytogenes HPB2262]
gi|254937256|ref|ZP_05268953.1| ribosomal protein L4 [Listeria monocytogenes F6900]
gi|254991853|ref|ZP_05274043.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J2-064]
gi|255017640|ref|ZP_05289766.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL F2-515]
gi|255022701|ref|ZP_05294687.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-208]
gi|255027145|ref|ZP_05299131.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J2-003]
gi|255029694|ref|ZP_05301645.1| 50S ribosomal protein L4 [Listeria monocytogenes LO28]
gi|255519641|ref|ZP_05386878.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-175]
gi|284800483|ref|YP_003412348.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5578]
gi|284993669|ref|YP_003415437.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5923]
gi|290891816|ref|ZP_06554813.1| ribosomal protein L4 [Listeria monocytogenes FSL J2-071]
gi|300763618|ref|ZP_07073616.1| hypothetical protein LMHG_10847 [Listeria monocytogenes FSL N1-017]
gi|347549932|ref|YP_004856260.1| putative 50S ribosomal protein L4 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|386009410|ref|YP_005927688.1| rplD [Listeria monocytogenes L99]
gi|386028030|ref|YP_005948806.1| 50S ribosomal protein L4 [Listeria monocytogenes M7]
gi|386044939|ref|YP_005963744.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes 10403S]
gi|386048362|ref|YP_005966694.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes J0161]
gi|386051603|ref|YP_005969594.1| 50S ribosomal protein L4/L1 family [Listeria monocytogenes FSL
R2-561]
gi|386054820|ref|YP_005972378.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes Finland 1998]
gi|386733316|ref|YP_006206812.1| 50S ribosomal protein L4 [Listeria monocytogenes 07PF0776]
gi|404282197|ref|YP_006683095.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2755]
gi|404285127|ref|YP_006686024.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2372]
gi|404288011|ref|YP_006694597.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404409011|ref|YP_006691726.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2376]
gi|404411881|ref|YP_006697469.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC5850]
gi|404414707|ref|YP_006700294.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC7179]
gi|405750976|ref|YP_006674442.1| 50S ribosomal protein L4 [Listeria monocytogenes ATCC 19117]
gi|405753838|ref|YP_006677303.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2378]
gi|405756751|ref|YP_006680215.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2540]
gi|405759684|ref|YP_006688960.1| 50S ribosomal protein L4 [Listeria monocytogenes SLCC2479]
gi|406705366|ref|YP_006755720.1| ribosomal protein L4 [Listeria monocytogenes L312]
gi|417318611|ref|ZP_12105186.1| 50S ribosomal protein L4 [Listeria monocytogenes J1-220]
gi|422810667|ref|ZP_16859078.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-208]
gi|423101346|ref|ZP_17089050.1| 50S ribosomal protein L4 [Listeria innocua ATCC 33091]
gi|424715441|ref|YP_007016156.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424824381|ref|ZP_18249394.1| 50S ribosomal protein L4 [Listeria monocytogenes str. Scott A]
gi|46577145|sp|P61054.1|RL4_LISIN RecName: Full=50S ribosomal protein L4
gi|46577146|sp|P61055.1|RL4_LISMO RecName: Full=50S ribosomal protein L4
gi|67461151|sp|Q71WE7.1|RL4_LISMF RecName: Full=50S ribosomal protein L4
gi|254803741|sp|B8DB09.1|RL4_LISMH RecName: Full=50S ribosomal protein L4
gi|259491564|sp|C1KZH9.1|RL4_LISMC RecName: Full=50S ribosomal protein L4
gi|16412119|emb|CAD00709.1| ribosomal protein L4 [Listeria monocytogenes EGD-e]
gi|16415316|emb|CAC98006.1| ribosomal protein L4 [Listeria innocua Clip11262]
gi|46882076|gb|AAT05369.1| ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
F2365]
gi|217335440|gb|ACK41234.1| ribosomal protein L4/L1 family [Listeria monocytogenes HCC23]
gi|225877638|emb|CAS06352.1| ribosomal protein L4 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258601490|gb|EEW14815.1| ribosomal protein L4 [Listeria monocytogenes FSL N3-165]
gi|258607555|gb|EEW20163.1| ribosomal protein L4 [Listeria monocytogenes FSL R2-503]
gi|258609862|gb|EEW22470.1| ribosomal protein L4 [Listeria monocytogenes F6900]
gi|284056045|gb|ADB66986.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5578]
gi|284059136|gb|ADB70075.1| 50S ribosomal protein L4 [Listeria monocytogenes 08-5923]
gi|290558410|gb|EFD91927.1| ribosomal protein L4 [Listeria monocytogenes FSL J2-071]
gi|293582646|gb|EFF94678.1| ribosomal protein L4 [Listeria monocytogenes HPB2262]
gi|293590875|gb|EFF99209.1| 50S ribosomal protein L4 [Listeria monocytogenes J2818]
gi|293594249|gb|EFG02010.1| ribosomal protein L4 [Listeria monocytogenes FSL J1-194]
gi|300515895|gb|EFK42944.1| hypothetical protein LMHG_10847 [Listeria monocytogenes FSL N1-017]
gi|307572220|emb|CAR85399.1| rplD [Listeria monocytogenes L99]
gi|328469804|gb|EGF40721.1| 50S ribosomal protein L4 [Listeria monocytogenes J1-220]
gi|332313061|gb|EGJ26156.1| 50S ribosomal protein L4 [Listeria monocytogenes str. Scott A]
gi|336024611|gb|AEH93748.1| ribosomal protein L4 [Listeria monocytogenes M7]
gi|345535353|gb|AEO04794.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes J0161]
gi|345538173|gb|AEO07613.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes 10403S]
gi|346425449|gb|AEO26974.1| ribosomal protein L4/L1 family [Listeria monocytogenes FSL R2-561]
gi|346647471|gb|AEO40096.1| 50S ribosomal protein L4/L1 [Listeria monocytogenes Finland 1998]
gi|346983003|emb|CBW87040.1| Putative ribosomal protein L4 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|370792132|gb|EHN60023.1| 50S ribosomal protein L4 [Listeria innocua ATCC 33091]
gi|378750872|gb|EHY61463.1| 50S ribosomal protein L4 [Listeria monocytogenes FSL J1-208]
gi|384392074|gb|AFH81144.1| 50S ribosomal protein L4 [Listeria monocytogenes 07PF0776]
gi|404220176|emb|CBY71540.1| ribosomal protein L4 [Listeria monocytogenes ATCC 19117]
gi|404223038|emb|CBY74401.1| ribosomal protein L4 [Listeria monocytogenes SLCC2378]
gi|404225951|emb|CBY77313.1| ribosomal protein L4 [Listeria monocytogenes SLCC2540]
gi|404228832|emb|CBY50237.1| ribosomal protein L4 [Listeria monocytogenes SLCC2755]
gi|404231707|emb|CBY53111.1| ribosomal protein L4 [Listeria monocytogenes SLCC5850]
gi|404234629|emb|CBY56032.1| ribosomal protein L4 [Listeria monocytogenes SLCC2372]
gi|404237566|emb|CBY58968.1| ribosomal protein L4 [Listeria monocytogenes SLCC2479]
gi|404240406|emb|CBY61807.1| ribosomal protein L4 [Listeria monocytogenes SLCC7179]
gi|404243160|emb|CBY64560.1| ribosomal protein L4 [Listeria monocytogenes SLCC2376]
gi|404246940|emb|CBY05165.1| ribosomal protein L4 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406362396|emb|CBY68669.1| ribosomal protein L4 [Listeria monocytogenes L312]
gi|424014625|emb|CCO65165.1| 50S ribosomal protein L4 [Listeria monocytogenes serotype 4b str.
LL195]
gi|441472424|emb|CCQ22179.1| 50S ribosomal protein L4 [Listeria monocytogenes]
gi|441475567|emb|CCQ25321.1| 50S ribosomal protein L4 [Listeria monocytogenes N53-1]
Length = 207
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G GE L+ + VV +++ + R+GT R EVRGGGRK
Sbjct: 4 LSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLAI + ++S E
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTKEF ++ +D KA +V SENVE S+RN+ + ++
Sbjct: 124 VVLEGLT--FDAPKTKEFAAFLKNISVD--TKALIVVAGESENVELSARNLQGITVIPAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
++++ ++ + L++T + V+
Sbjct: 180 SISVLEVAKHDKLIITKAAVE 200
>gi|83319335|ref|YP_424659.1| 50S ribosomal protein L4 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|90110059|sp|P10135.2|RL4_MYCCT RecName: Full=50S ribosomal protein L4
gi|83283221|gb|ABC01153.1| 50S ribosomal protein L4 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 208
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G +I E L+ + + ++ +I+ R+GT TR EV GGGRK
Sbjct: 3 LQVLDTKGNEIKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGV FGP P ++ +NKK + LA + ++ N
Sbjct: 63 PWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++FD F +P TKE + M+ +D QK + E E V KSS NI +K ++
Sbjct: 123 LVIVDKFD--FAKPSTKEMVVVMKNLKIDD-QKTLIVTKEKEELVVKSSNNITGVKTISA 179
Query: 233 RTLNLFDILDAETLVLT 249
LN+FD+L+A L++T
Sbjct: 180 NQLNVFDLLNATKLLIT 196
>gi|302344355|ref|YP_003808884.1| 50S ribosomal protein L4 [Desulfarculus baarsii DSM 2075]
gi|301640968|gb|ADK86290.1| ribosomal protein L4/L1e [Desulfarculus baarsii DSM 2075]
Length = 206
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 109/199 (54%), Gaps = 19/199 (9%)
Query: 62 EKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTG 121
+K+GE L + A + ++H ++ + +R GTA T TR EVRGGGRKP+ QK TG
Sbjct: 12 QKVGEIELADEVFAAEVKAHLLHEVVVWQLAKRRAGTACTKTRSEVRGGGRKPWRQKGTG 71
Query: 122 RARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDG 181
RAR GS R+PL GGG GPKPRD+ + KK ++ A+ +A++ A E +V+ F
Sbjct: 72 RARVGSRRSPLWRGGGTTHGPKPRDYDYNVPKKVRKAALKSALSDKLAEEKLMVLRGFG- 130
Query: 182 KFERPKTKEFIEAMRRWGLDPKQKATFLVMEV-------SENVEKSSRNIGTLKMLTPRT 234
E KTK F E + ATF V E +EKS+RNI +K+L
Sbjct: 131 -LEAIKTKAFAEVL----------ATFQTQNVLVVTAGPDEVLEKSARNIPMVKVLRAEG 179
Query: 235 LNLFDILDAETLVLTPSTV 253
LN++DIL + L+L V
Sbjct: 180 LNVYDILRYDRLMLLEPAV 198
>gi|319938506|ref|ZP_08012900.1| 50S ribosomal protein L4 [Coprobacillus sp. 29_1]
gi|319806422|gb|EFW03089.1| 50S ribosomal protein L4 [Coprobacillus sp. 29_1]
Length = 207
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT R EVRGGGRKP+ QK TGRAR+GS R P GGGVVFGP PR ++ K+N+K
Sbjct: 45 RQGTHKVKNRTEVRGGGRKPWRQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYTFKLNRK 104
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
++LA+ +A++ V++ PKTK+ I+ + L+ +K ++ EV+
Sbjct: 105 VRQLALKSALSQKVIDNEMTVLDTIT--LNAPKTKDMIKVLE--NLEANRKTLIVMDEVN 160
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
ENV S+RNI +K++ + LN++DILD LV+T +
Sbjct: 161 ENVTLSARNIPGVKVIDSKGLNVYDILDCTKLVITEGAI 199
>gi|408355487|ref|YP_006844018.1| 50S ribosomal protein L4 [Amphibacillus xylanus NBRC 15112]
gi|407726258|dbj|BAM46256.1| 50S ribosomal protein L4 [Amphibacillus xylanus NBRC 15112]
Length = 207
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + + +G ++G+ L+ + V+H A++ +KR+GT + R V GGGRK
Sbjct: 4 LALYNQSGSQVGDIELNDAVFGIEPNTHVLHDAVVMQQASKRQGTHAVKNRSAVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLA+ +A+++ E+
Sbjct: 64 PWRQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYAYKLPKKVRRLALRSALSTKVKEESL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+E E PKTKE I+ + L+ +KA + + E V KS+ N+ +K+L
Sbjct: 124 TVLEGLT--IEVPKTKEIIKLLA--ALNINEKALIVTNQKDEVVAKSASNLQNVKVLHAS 179
Query: 234 TLNLFDILDAETLVLT 249
+N DIL + +++T
Sbjct: 180 QINTLDILAYDRMIIT 195
>gi|339452297|ref|ZP_08655667.1| 50S ribosomal protein L4 [Leuconostoc lactis KCTC 3528]
Length = 207
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAELELNDAVFAIEPNNAVITDAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPTPRSYAYRINRKSYQLALKSVLSQKLADG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + +D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLANLSVDT--KTLVVVDEDNENAILSARNLTNVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|163752916|ref|ZP_02160040.1| 50S ribosomal protein L4 [Kordia algicida OT-1]
gi|161326648|gb|EDP97973.1| 50S ribosomal protein L4 [Kordia algicida OT-1]
Length = 209
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT R E+ G RK QK TG AR GS + PL GGG VFGP+PR ++ K
Sbjct: 41 LANQRQGTHKAKERAEIAGSTRKIKKQKGTGTARAGSIKNPLFKGGGRVFGPRPRSYAQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A+ A +E+ IV+E+FD F+ PKTK FI ++ GLD K K+ F++
Sbjct: 101 LNKNVKRLARKSALTLKAKSESIIVIEDFD--FDAPKTKNFINVLKALGLDSK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVL 248
+ + NV SSRN+ T ++LT L+ + I++A ++V+
Sbjct: 158 GDSNNNVYLSSRNLKTSEVLTSSELSTYKIVNANSIVV 195
>gi|392413510|ref|YP_006450117.1| 50S ribosomal protein L4, bacterial/organelle [Desulfomonile
tiedjei DSM 6799]
gi|390626646|gb|AFM27853.1| 50S ribosomal protein L4, bacterial/organelle [Desulfomonile
tiedjei DSM 6799]
Length = 208
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 94 KRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINK 153
+R GTA+T TRG++ GGG+KP+ QK TGRAR G+NR+P+ GGG VFGP PR ++ + K
Sbjct: 44 RRCGTAATKTRGQISGGGKKPWRQKGTGRARAGTNRSPVWVGGGTVFGPHPRSYAFSLPK 103
Query: 154 KEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV 213
K ++ A+ + ++S N VV++ + E PKTK F+E ++ GLD K F+ E
Sbjct: 104 KVRKEALRSVLSSRLRDNNLFVVDKIE--LESPKTKLFLETVKAMGLDT-GKTLFVTSEK 160
Query: 214 SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
E + +SSRN+ + +L LN++D+L + LVL V ++ R G
Sbjct: 161 DETLSRSSRNLYHVMILPTEGLNVYDLLRYDRLVLLQDAVPKIHERLG 208
>gi|322418365|ref|YP_004197588.1| 50S ribosomal protein L4 [Geobacter sp. M18]
gi|320124752|gb|ADW12312.1| ribosomal protein L4/L1e [Geobacter sp. M18]
Length = 207
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 116/208 (55%), Gaps = 7/208 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L + K+GE + D ++H A+ + N+R+GT + R V G G
Sbjct: 2 AKLDVFDIKNAKVGEIEVSDAVFNDDVREYLIHEAVKIQLANRRQGTVAVKNRSAVAGSG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TG+AR+G +R P PGGGV FGP+P+ +++ +NKK ++ A+ +A++ +
Sbjct: 62 KKPFKQKGTGQARQGCSRAPQYPGGGVAFGPQPKTYNLSMNKKARKAALRSALSMLYKKD 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKML 230
V+ F+ KTK F+E + + LD T ++ + + +E S+RN+ +K+L
Sbjct: 122 AITVLNNFE--LPAVKTKGFVEVLNAFNLDK----TLVITDTANPTLELSARNVKHVKVL 175
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNG 258
P LN+FDI+ +++V T + V + G
Sbjct: 176 GPEGLNIFDIMKYQSVVFTEAAVRRVEG 203
>gi|224370690|ref|YP_002604854.1| 50S ribosomal protein L4 [Desulfobacterium autotrophicum HRM2]
gi|259491553|sp|C0Q9X2.1|RL4_DESAH RecName: Full=50S ribosomal protein L4
gi|223693407|gb|ACN16690.1| RplD [Desulfobacterium autotrophicum HRM2]
Length = 207
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 7/210 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L+ +GEK+ E +L + + ++V+H + + +R GTA + R EV G
Sbjct: 2 AAVDVLNRSGEKVSEAFLADEVFSIPVKKSVLHDVVRMQLARRRSGTAKSKGRSEVSGST 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RK Y QK TG AR GS ++PLR GGGV+FGP PR ++ I KK + LA+ A++S AA
Sbjct: 62 RKLYRQKGTGNARSGSVKSPLRRGGGVIFGPAPRSYAYAIPKKVRALALKMALSSKLAAN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKML 230
V++ F + KTKEF + GL K T +V++ + N+ S+RNI +K++
Sbjct: 122 ELSVIDTF--AMDSIKTKEFDSIIDHLGL----KNTLIVIDGDDRNLVLSARNIPDVKVI 175
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
LN++DIL + L+L S + + GR+
Sbjct: 176 RTEGLNVYDILKYDNLLLIESAIKEIEGRF 205
>gi|125975385|ref|YP_001039295.1| 50S ribosomal protein L4 [Clostridium thermocellum ATCC 27405]
gi|256005328|ref|ZP_05430294.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 2360]
gi|281419347|ref|ZP_06250362.1| ribosomal protein L4/L1e [Clostridium thermocellum JW20]
gi|385777821|ref|YP_005686986.1| 50S ribosomal protein L4 [Clostridium thermocellum DSM 1313]
gi|419723227|ref|ZP_14250360.1| ribosomal protein L4/L1e [Clostridium thermocellum AD2]
gi|419727128|ref|ZP_14254134.1| ribosomal protein L4/L1e [Clostridium thermocellum YS]
gi|166234659|sp|A3DJH3.1|RL4_CLOTH RecName: Full=50S ribosomal protein L4
gi|125715610|gb|ABN54102.1| ribosomal protein L4/L1e [Clostridium thermocellum ATCC 27405]
gi|255990764|gb|EEU00880.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 2360]
gi|281406967|gb|EFB37230.1| ribosomal protein L4/L1e [Clostridium thermocellum JW20]
gi|316939501|gb|ADU73535.1| ribosomal protein L4/L1e [Clostridium thermocellum DSM 1313]
gi|380769533|gb|EIC03447.1| ribosomal protein L4/L1e [Clostridium thermocellum YS]
gi|380780692|gb|EIC10357.1| ribosomal protein L4/L1e [Clostridium thermocellum AD2]
Length = 208
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + G+ +GE L + + +H+ ++ + N+R+GT ST T+ EVRGGGRK
Sbjct: 4 VDVYDINGKVVGEINLRDDIFGIEVNKHAIHQVIVNQLANRRQGTQSTKTKSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+ GG+ GPKPR + + KK +RLA+ +A++S
Sbjct: 64 PWRQKGTGRARHGSIRSAQWVKGGIALGPKPRSYKYAVPKKLRRLALKSALSSKVNENEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ + F+ KTK+ ++ ++ A ++ + + NVE S+RNI LK L
Sbjct: 124 LVLDSLN--FDEIKTKQMANVLKNLKVND-TTAVLVLADKNRNVELSARNIPGLKTLFVN 180
Query: 234 TLNLFDILDAETLVLTPSTV 253
T+N++DI+ + ++T V
Sbjct: 181 TMNVYDIIRHDKFIITKDAV 200
>gi|16077185|ref|NP_387998.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
168]
gi|221307929|ref|ZP_03589776.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312250|ref|ZP_03594055.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317184|ref|ZP_03598478.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321447|ref|ZP_03602741.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313788|ref|YP_004206075.1| 50S ribosomal protein L4 [Bacillus subtilis BSn5]
gi|384173777|ref|YP_005555162.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402774359|ref|YP_006628303.1| 50S ribosomal protein L4 [Bacillus subtilis QB928]
gi|428277533|ref|YP_005559268.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. natto BEST195]
gi|452916571|ref|ZP_21965193.1| 50S ribosomal protein L4 [Bacillus subtilis MB73/2]
gi|1173050|sp|P42921.1|RL4_BACSU RecName: Full=50S ribosomal protein L4
gi|786154|dbj|BAA08832.1| ribosomal protein L4 [Bacillus subtilis]
gi|1165304|gb|AAC45957.1| L4 [Bacillus subtilis]
gi|2632384|emb|CAB11893.1| ribosomal protein L4 [Bacillus subtilis subsp. subtilis str. 168]
gi|291482490|dbj|BAI83565.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. natto BEST195]
gi|320020062|gb|ADV95048.1| 50S ribosomal protein L4 [Bacillus subtilis BSn5]
gi|349593001|gb|AEP89188.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402479545|gb|AFQ56054.1| Ribosomal protein L4 [Bacillus subtilis QB928]
gi|407955807|dbj|BAM49047.1| 50S ribosomal protein L4 [Bacillus subtilis BEST7613]
gi|407963078|dbj|BAM56317.1| 50S ribosomal protein L4 [Bacillus subtilis BEST7003]
gi|452114480|gb|EME04880.1| 50S ribosomal protein L4 [Bacillus subtilis MB73/2]
Length = 207
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G G+ L+ + +VV A++ + R+GT R EVRGGGRKP+ QK T
Sbjct: 11 GSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNIIVLEDLT 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D+
Sbjct: 131 --LDTAKTKEMAAILK--GLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDV 186
Query: 241 LDAETLVLTPSTVD 254
++ E L++T + V+
Sbjct: 187 VNHEKLLITKAAVE 200
>gi|116873997|ref|YP_850778.1| 50S ribosomal protein L4 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461454|sp|A0ALW7.1|RL4_LISW6 RecName: Full=50S ribosomal protein L4
gi|116742875|emb|CAK21999.1| ribosomal protein L4 [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 207
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G GE L+ + VV +++ + R+GT R EVRGGGRK
Sbjct: 4 LSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR ++ K+ KK +RLAI + ++S E
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E F+ PKTKEF ++ +D KA +V SENVE S+RN+ + ++
Sbjct: 124 VVLEGLT--FDAPKTKEFATFLKNISVD--TKALIVVAGESENVELSARNLQGITVIPAE 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
++++ ++ + L++T + V+
Sbjct: 180 SISVLEVAKHDKLIITKAAVE 200
>gi|374709481|ref|ZP_09713915.1| 50S ribosomal protein L4 [Sporolactobacillus inulinus CASD]
Length = 207
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+++A++ + R+GT + R VRGGGRKP+ QK TGRAR+GS R+P GGG VFG
Sbjct: 32 VIYQAVVMQQASLRQGTHAVKNRSAVRGGGRKPWKQKGTGRARQGSIRSPQWVGGGTVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR +S K+ KK +RLAI + ++ A N IV++ K E PKTKE + L
Sbjct: 92 PTPRSYSYKLPKKVRRLAIRSVLSDKAGENNLIVLDAL--KIEAPKTKEITALLSN--LS 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
+KA + ++ E SSRN+ +K+LT +N+ D++ + L++T
Sbjct: 148 VAEKALIVTNDIDETAVLSSRNLPGVKVLTANEVNVLDVIAHDKLIVT 195
>gi|146298160|ref|YP_001192751.1| 50S ribosomal protein L4 [Flavobacterium johnsoniae UW101]
gi|189029503|sp|A5FMY0.1|RL4_FLAJO RecName: Full=50S ribosomal protein L4
gi|146152578|gb|ABQ03432.1| 50S ribosomal protein L4/L1e [Flavobacterium johnsoniae UW101]
Length = 209
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 14/209 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
+ +L F G+ G K D+ A+ + A+ D++ N+R+GT R EV
Sbjct: 3 VKVLDFNGKDTGR-----KVQLSDSVFAIEPNNHAVYLDVKQYLANQRQGTHKAKERAEV 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK QK TG AR GS + PL GGG VFGP+PR +S K+NK KRLA +A +
Sbjct: 58 TGSTRKIKKQKGTGTARAGSVKNPLFKGGGTVFGPRPRSYSFKLNKNLKRLARKSAFSIK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A N IV+E+F+ FE P TK FI ++ GL+ K K+ F++ E ++NV SSRN+
Sbjct: 118 AKESNIIVLEDFN--FEAPNTKNFINVLKALGLENK-KSLFVLGESNKNVYLSSRNLKAS 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVDFL 256
++T L+ + IL+ LVL +++ +
Sbjct: 175 NVVTSSELSTYAILNTNNLVLLEGSLELI 203
>gi|373453139|ref|ZP_09545036.1| 50S ribosomal protein L4 [Eubacterium sp. 3_1_31]
gi|371964191|gb|EHO81726.1| 50S ribosomal protein L4 [Eubacterium sp. 3_1_31]
Length = 209
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS G+++ E L + + + A++ + R+GT T R EVRGGGRK
Sbjct: 4 MVVLSQAGKELHEITLADTVFGIEPNQQCIFDAIVMQRASMRQGTHDTKNRTEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGG VFGP PR ++ K+NKK +RLA+ + ++ A
Sbjct: 64 PWRQKGTGRARQGSIRATQWRGGGTVFGPTPRSYAYKLNKKVRRLALKSVLSEKVAENAM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKMLT 231
VV++ + E PKTK F E + L+ +K F+V E EN S RNI ++ MLT
Sbjct: 124 SVVDKLE--LEAPKTKAFNEIIA--NLNAPRKTLFVVSEGEDFENAFLSMRNIPSMMMLT 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN++DI++A +V T + V
Sbjct: 180 ADGLNVYDIVNANKIVFTEAAV 201
>gi|317485821|ref|ZP_07944685.1| ribosomal protein L4/L1 family protein [Bilophila wadsworthia
3_1_6]
gi|345887472|ref|ZP_08838652.1| 50S ribosomal protein L4 [Bilophila sp. 4_1_30]
gi|316922927|gb|EFV44149.1| ribosomal protein L4/L1 family protein [Bilophila wadsworthia
3_1_6]
gi|345041781|gb|EGW45910.1| 50S ribosomal protein L4 [Bilophila sp. 4_1_30]
Length = 206
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + KR GT ST TR V GGG KP+ QK TGRAR GSNR+P+ GG ++FG
Sbjct: 32 ILHLVVRAQLAAKRAGTHSTKTRAMVSGGGVKPWRQKGTGRARAGSNRSPVWRGGAILFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PR + K+NKK ++LA+ A++S A +N +VV+ FD KTK F + GL
Sbjct: 92 PQPRKYDFKVNKKIRKLALRMALSSRLAGDNLLVVKGFD--LPEAKTKVFAKIAGNLGLS 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
KA + E S N+ SSRN+ + + TP L++++IL + LVL V+
Sbjct: 150 ---KALIIAPEESRNLVLSSRNLPGITLTTPDQLSVYEILKHKQLVLLEGAVE 199
>gi|340751204|ref|ZP_08688027.1| 50S ribosomal protein L4 [Fusobacterium mortiferum ATCC 9817]
gi|229421724|gb|EEO36771.1| 50S ribosomal protein L4 [Fusobacterium mortiferum ATCC 9817]
Length = 210
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 9/200 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + TG + G + + +AV+H L ++ R+GTA+T TR VRGGGRK
Sbjct: 4 LNIYNLTGTQTGTVEVKDTVFGIEPNQAVLHEVLTAELAAARQGTAATKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV FGP+PR + K+NKK + LA+ +A+++ A +
Sbjct: 64 PFKQKGTGRARQGSIRAPHMVGGGVTFGPQPRSYEKKVNKKVRNLALRSALSAKVANGDV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKM 229
+V DG E PKTK + ++ K F+V +++E N+ S RN+ +
Sbjct: 124 LV---LDGTIETPKTKTIVALTN--AINATNKQLFVVNDLAEMNDYNLYLSVRNLENAVV 178
Query: 230 LTPRTLNLFDILDAETLVLT 249
L P + ++ +L E +++T
Sbjct: 179 LQPNEIGVYWLLKQEKVIIT 198
>gi|295398289|ref|ZP_06808331.1| ribosomal protein L4/L1 family protein [Aerococcus viridans ATCC
11563]
gi|294973428|gb|EFG49213.1| ribosomal protein L4/L1 family protein [Aerococcus viridans ATCC
11563]
Length = 207
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + A + ++ +I + R+GT R EV GGGRKP+ QK T
Sbjct: 11 GSQAGEITLNDEVFAIEPNENAIYDVVIMQQASLRQGTHKVKGRSEVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG FGP PR ++ K+ +K +RLA+ +A+++ A N IVV+E
Sbjct: 71 GRARQGSIRSPQWVGGGRAFGPTPRSYAYKLPRKVRRLALRSALSTKVAENNFIVVDEL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK F E + L + K ++ + ++N + S+RN+ +K++ +N+FD+
Sbjct: 130 -AFETPKTKLFQEVLN--NLQVENKVLVVINKDNDNAQLSARNLPNVKVVDENNVNVFDL 186
Query: 241 LDAETLVLTPSTV 253
+++E +++T + +
Sbjct: 187 VNSEKVIITKAAL 199
>gi|451947650|ref|YP_007468245.1| 50S ribosomal protein L4, bacterial/organelle [Desulfocapsa
sulfexigens DSM 10523]
gi|451906998|gb|AGF78592.1| 50S ribosomal protein L4, bacterial/organelle [Desulfocapsa
sulfexigens DSM 10523]
Length = 207
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 7/190 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + I++ + EK+GE L+ ++H + KR G AST TR EVRGGG
Sbjct: 2 STVDIVNTSNEKVGEIELNADVFDLTVKEHLLHDVVRMQRAAKRAGNASTKTRREVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
KP+ QK TGRAR G+ +P+ GGGV FGPKPRD+S K+N+K K+ A++ A+++
Sbjct: 62 AKPWKQKGTGRARAGTRNSPIWRGGGVTFGPKPRDYSFKLNRKVKQQALAMAMSARLQEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNIGTLKML 230
N +V+++F + KTK F+ M+ G D + +V E + ENV KS+RN K+L
Sbjct: 122 NLVVIDDF--IMDAIKTKNFVGIMK--GFDFEN--CLVVTEGNYENVNKSARNANGFKVL 175
Query: 231 TPRTLNLFDI 240
LN++DI
Sbjct: 176 PVEGLNVYDI 185
>gi|220928208|ref|YP_002505117.1| 50S ribosomal protein L4 [Clostridium cellulolyticum H10]
gi|254803726|sp|B8I7Y0.1|RL4_CLOCE RecName: Full=50S ribosomal protein L4
gi|219998536|gb|ACL75137.1| ribosomal protein L4/L1e [Clostridium cellulolyticum H10]
Length = 207
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + GE +G+ L D + +H ++ + N+R+GT ST T+ EVRGGG+K
Sbjct: 4 VDLYNMKGEVVGDIQLSDNVFGTDVNKDALHAVVVNQLANRRQGTQSTKTKSEVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+ GG+V GPKPR + + KK KR+A+ +A+ S +
Sbjct: 64 PWRQKGTGRARQGSIRSAQWVKGGIVLGPKPRSYRYTLPKKVKRIAMKSALTSKVSGNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V++ + KTK + + +D A ++ +EN+ KS+RNI +K
Sbjct: 124 FVLDAL--ALDAIKTKSMVGVLNNLKVDS--SALLVIDSKNENIVKSARNIPGIKTAYVN 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
TLN+FDIL + ++T V+
Sbjct: 180 TLNVFDILKYDKFIITKDAVE 200
>gi|342218010|ref|ZP_08710642.1| 50S ribosomal protein L4 [Megasphaera sp. UPII 135-E]
gi|341591776|gb|EGS34878.1| 50S ribosomal protein L4 [Megasphaera sp. UPII 135-E]
Length = 207
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ G + GE L+ + AV+ +AL+ + N+R GT ST TRG VRGGGRKP+ Q
Sbjct: 8 NIAGTQTGEIELNDSVFGVEVNEAVMRQALLRQLANERLGTHSTKTRGLVRGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS+R+PL GGG ++GP PR ++ K+ +K +RLA+ +A++ V++
Sbjct: 68 KGTGRARVGSSRSPLWVGGGTIWGPHPRSYAQKMPRKARRLAVKSALSDKVNTNELFVLD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSEN---VEKSSRNIGTLKMLTPRT 234
E + KTKE + + + ++ V+ V++N VE+ +RNI +K ++
Sbjct: 128 EIN--LAASKTKEIVALINNFKFTGEK-----VLFVTDNDVIVERCARNIEGVKAISTEG 180
Query: 235 LNLFDILDAETLVLTPSTV 253
+N+FD+L L +T S V
Sbjct: 181 VNMFDLLHYTKLFVTKSAV 199
>gi|395238752|ref|ZP_10416661.1| 50S ribosomal protein L4 [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477273|emb|CCI86638.1| 50S ribosomal protein L4 [Lactobacillus gigeriorum CRBIP 24.85]
Length = 205
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ GE L+ K + +VV A+I KR+GT+ R VRGGG+K
Sbjct: 4 LKVMDQNGKGSGEITLNDKVFGIEPNESVVFDAIIRQRAGKRQGTSKVKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG+VFGP PR ++ + +K++RLAI + ++ A E+
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGIVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLADEDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF+ + GL+ + K LV+ +NV+ S+RN+ +K++
Sbjct: 124 IVLDQLT--MAAPKTKEFVALLN--GLNVEGK--VLVVSDDKNVQLSARNLTKVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ + L+LT V
Sbjct: 178 GLNVEDAVNYQKLILTQDAV 197
>gi|313665576|ref|YP_004047447.1| 50S ribosomal protein L4 [Mycoplasma leachii PG50]
gi|392389174|ref|YP_005907583.1| 50S ribosomal protein L4 [Mycoplasma leachii 99/014/6]
gi|312949403|gb|ADR23999.1| 50S ribosomal protein L4 [Mycoplasma leachii PG50]
gi|339276819|emb|CBV67398.1| 50S ribosomal protein L4 [Mycoplasma leachii 99/014/6]
Length = 208
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G +I E L+ + + ++ +I+ R+GT TR EV GGGRK
Sbjct: 3 LQVLDTKGNEIKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGV FGP P ++ +NKK + LA + ++ N
Sbjct: 63 PWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++FD F +P TKE + M+ +D QK + E E V KSS NI +K ++
Sbjct: 123 LVIVDKFD--FAKPSTKEMVLVMKNLKIDD-QKTLIVTKEKEELVVKSSNNITGVKTISA 179
Query: 233 RTLNLFDILDAETLVLT 249
LN+FD+L+A L++T
Sbjct: 180 NQLNVFDLLNATKLLIT 196
>gi|282882504|ref|ZP_06291125.1| ribosomal protein, L4/L1 family [Peptoniphilus lacrimalis 315-B]
gi|281297646|gb|EFA90121.1| ribosomal protein, L4/L1 family [Peptoniphilus lacrimalis 315-B]
Length = 207
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 4/205 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +++ G + E ++ D VV+ + + N+R+GT S TR EVRGGG
Sbjct: 2 AKIQMINIEGNPVSEIEVNDNIFNCDVNEHVVYLVVKNILANRRQGTHSAKTRSEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R+P GGGVVF KPRD+S KK +RLA+ + + S
Sbjct: 62 RKPWRQKGTGRARQGSIRSPQFRGGGVVFAKKPRDYSYTTPKKVRRLALKSVLTSKLQDS 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IV+++ + KTK + ++ D +KA ++ + +EN+ +S+RNI +K
Sbjct: 122 EIIVLDKLE--LNEIKTKTVVNILKDIKAD--KKALIVINDKNENIIRSARNIEGVKTEF 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFL 256
+ +N++D+L +LV+T +D L
Sbjct: 178 VKNINVYDLLKYNSLVITKDALDTL 202
>gi|42561269|ref|NP_975720.1| 50S ribosomal protein L4 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|46577155|sp|P61065.1|RL4_MYCMS RecName: Full=50S ribosomal protein L4
gi|42492767|emb|CAE77362.1| 50S RIBOSOMAL PROTEIN L4 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301320633|gb|ADK69276.1| 50S ribosomal protein L4 [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 208
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G +I E L+ + + ++ +I+ R+GT TR EV GGGRK
Sbjct: 3 LQVLDIKGNEIKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGV FGP P ++ +NKK + LA + ++ N
Sbjct: 63 PWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++F+ F +P TKE + M+ +D QK + E E V KSS NI +K ++
Sbjct: 123 LVIVDKFE--FAKPSTKEMVVVMKNLKIDD-QKTLIVTKEKEELVVKSSNNITGVKTISA 179
Query: 233 RTLNLFDILDAETLVLT 249
LN+FD+L+A L++T
Sbjct: 180 NQLNVFDLLNATKLLIT 196
>gi|365121786|ref|ZP_09338700.1| 50S ribosomal protein L4 [Tannerella sp. 6_1_58FAA_CT1]
gi|363644387|gb|EHL83674.1| 50S ribosomal protein L4 [Tannerella sp. 6_1_58FAA_CT1]
Length = 206
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
M NKR+GT + R E+ G RK QK TG AR G +P+ GG VFGPKPRD+S K
Sbjct: 41 MANKRQGTHKSKERSEISGSTRKLKKQKGTGGARSGDINSPVMVGGARVFGPKPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A +VVE+F FE PKTKEF+ + L K K ++
Sbjct: 101 LNKKVKALARKSALSLKAQDNAIVVVEDFS--FEAPKTKEFVSVAKNLQLADK-KLLLVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
+ ++NV S+RN+ K++T LN + +LD +LVLT S+V +N
Sbjct: 158 ADQNKNVYLSARNVVKAKVVTVSELNTYKVLDCASLVLTESSVAAIN 204
>gi|167755913|ref|ZP_02428040.1| hypothetical protein CLORAM_01433 [Clostridium ramosum DSM 1402]
gi|237733229|ref|ZP_04563710.1| 50S ribosomal protein L4 [Mollicutes bacterium D7]
gi|365832662|ref|ZP_09374190.1| 50S ribosomal protein L4 [Coprobacillus sp. 3_3_56FAA]
gi|374627898|ref|ZP_09700299.1| 50S ribosomal protein L4 [Coprobacillus sp. 8_2_54BFAA]
gi|167703905|gb|EDS18484.1| 50S ribosomal protein L4 [Clostridium ramosum DSM 1402]
gi|229383610|gb|EEO33701.1| 50S ribosomal protein L4 [Coprobacillus sp. D7]
gi|365260078|gb|EHM90049.1| 50S ribosomal protein L4 [Coprobacillus sp. 3_3_56FAA]
gi|373912949|gb|EHQ44793.1| 50S ribosomal protein L4 [Coprobacillus sp. 8_2_54BFAA]
Length = 207
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT R EVRGGG+KP+ QK TGRAR+GS R P GGGVVFGP PR + K+N+K
Sbjct: 45 RQGTHKVKNRTEVRGGGKKPWRQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYKFKLNRK 104
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
+RLA+ +A+++ + +E KF+ PKTKE ++ + L+ K +V E+
Sbjct: 105 VRRLALKSALSTKINDNEFMALEAI--KFDAPKTKEMVKVLA--NLEAPVKTLIVVDEIC 160
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
NV +S+ NI +K+L + +N++DIL++ L++T + +
Sbjct: 161 PNVARSANNIPGVKLLDAKHVNVYDILNSNKLIMTEAAI 199
>gi|430755581|ref|YP_007211142.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430020101|gb|AGA20707.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 209
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G G+ L+ + +VV A++ + R+GT R EVRGGGRKP+ QK T
Sbjct: 13 GSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGT 72
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 73 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVNDNNIIVLEDLT 132
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D+
Sbjct: 133 --LDTAKTKEMAAILK--GLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDV 188
Query: 241 LDAETLVLTPSTVD 254
++ E L++T + V+
Sbjct: 189 VNHEKLLITKAAVE 202
>gi|296333114|ref|ZP_06875568.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672816|ref|YP_003864487.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|350264216|ref|YP_004875523.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|386756697|ref|YP_006229913.1| 50S ribosomal protein L4 [Bacillus sp. JS]
gi|296149730|gb|EFG90625.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411059|gb|ADM36177.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|349597103|gb|AEP84891.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|384929979|gb|AFI26657.1| 50S ribosomal protein L4 [Bacillus sp. JS]
Length = 207
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G G+ L+ + +VV A++ + R+GT R EVRGGGRKP+ QK T
Sbjct: 11 GSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVNDNNIIVLEDLT 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D+
Sbjct: 131 --LDTAKTKEMAAILK--GLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDV 186
Query: 241 LDAETLVLTPSTVD 254
++ E L++T + V+
Sbjct: 187 VNHEKLLITKAAVE 200
>gi|332666662|ref|YP_004449450.1| 50S ribosomal protein L4 [Haliscomenobacter hydrossis DSM 1100]
gi|332335476|gb|AEE52577.1| ribosomal protein L4/L1e [Haliscomenobacter hydrossis DSM 1100]
Length = 208
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 123/206 (59%), Gaps = 14/206 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTA------RAVVHRALITDMQNKRRGTASTLTRGEV 107
L + + GEK G +DL PD V++ ++ + N+R+GT + R E+
Sbjct: 3 LDVFNIQGEKTGRA-VDL----PDDVFGGEPNEHVLYLSVKQYLANQRQGTHKSKERWEI 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK + QK TG +R+G +PL PGG VFGP+PRD+ K+NKK KRLA +A+++
Sbjct: 58 SGSTRKLHRQKGTGGSRKGDINSPLFPGGARVFGPRPRDYEQKLNKKVKRLARRSALSTK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A + + ++VE+F+ FE KTK F + + + + K K+ +V E ++NV +SSRNI T
Sbjct: 118 AQSGSIVIVEDFN--FETAKTKNFADILSKLNVSGK-KSLVVVAEQNDNVFRSSRNIPTT 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTV 253
K++ + LN ++IL A LVL+ ++
Sbjct: 175 KVVRAQDLNTYEILRANALVLSEGSI 200
>gi|167749438|ref|ZP_02421565.1| hypothetical protein EUBSIR_00392 [Eubacterium siraeum DSM 15702]
gi|167657610|gb|EDS01740.1| 50S ribosomal protein L4 [Eubacterium siraeum DSM 15702]
Length = 206
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 76 PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPG 135
P+T V+H A++ + N+R+GT STLTR EV GGG+KP+ QK TG AR+GS R P
Sbjct: 28 PNTV--VMHAAVVNYLANQRQGTQSTLTRTEVSGGGKKPWRQKGTGHARQGSTRAPQWTH 85
Query: 136 GGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAM 195
GGV GPKPR ++ +NKK KRLA+ +A+++ + IVV+ + KTK + +
Sbjct: 86 GGVALGPKPRSYTYSLNKKVKRLALKSALSAKVQDGSMIVVDSITA--DEFKTKTIVNML 143
Query: 196 RRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ D KA ++ V E V KS+ NI +K TLN++DIL ++ V
Sbjct: 144 KALSAD---KALIVLNSVDEKVIKSAANIPGVKTTQANTLNVYDILKYNKFIVVKDAV 198
>gi|392406846|ref|YP_006443454.1| 50S ribosomal protein L4 [Anaerobaculum mobile DSM 13181]
gi|390619982|gb|AFM21129.1| 50S ribosomal protein L4, bacterial/organelle [Anaerobaculum mobile
DSM 13181]
Length = 208
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G+K+GE L + A +H+ ++ + +R+GT ST TRGEVRGGGRKP+
Sbjct: 6 VIGIDGQKVGEVALADEVFASRIHVPAMHQVVVAYLAAQRQGTHSTKTRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+PL GGV GPKPR + K+NKK +RLA+ +A++ ++
Sbjct: 66 RQKHTGRARQGSIRSPLWIKGGVAHGPKPRSYDQKVNKKVRRLAMRSALSLKLKENKLLL 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE + KTK+ + ++ + K ++ E +V +S+NI +K+L +
Sbjct: 126 VEGIESLSY--KTKDMCAFLA--NVNAQDKPLMVIHESMPSVYMASQNIPGMKVLHVDGI 181
Query: 236 NLFDILDAETLVLT 249
N+++IL+ E L+LT
Sbjct: 182 NVYEILNHEHLILT 195
>gi|291532094|emb|CBK97679.1| LSU ribosomal protein L4P [Eubacterium siraeum 70/3]
gi|291558165|emb|CBL35282.1| LSU ribosomal protein L4P [Eubacterium siraeum V10Sc8a]
Length = 206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 76 PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPG 135
P+T V+H A++ + N+R+GT STLTR EV GGG+KP+ QK TG AR+GS R P
Sbjct: 28 PNTV--VMHAAVVNYLANQRQGTQSTLTRTEVSGGGKKPWRQKGTGHARQGSTRAPQWTH 85
Query: 136 GGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAM 195
GGV GPKPR ++ +NKK KRLA+ +A+++ + IVV+ + KTK + +
Sbjct: 86 GGVALGPKPRSYTYSLNKKVKRLALKSALSAKVQDGSMIVVDSITA--DEFKTKTIVNML 143
Query: 196 RRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ D KA ++ V E V KS+ NI +K TLN++DIL ++ V
Sbjct: 144 KALSAD---KALIVLNSVDEKVIKSAANIPGVKTTQANTLNVYDILKYNKFIVVKDAV 198
>gi|218282170|ref|ZP_03488469.1| hypothetical protein EUBIFOR_01051 [Eubacterium biforme DSM 3989]
gi|218216849|gb|EEC90387.1| hypothetical protein EUBIFOR_01051 [Eubacterium biforme DSM 3989]
Length = 209
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +++ TG +G L+ + + ++ AL+ M ++R+GTA T R EV GGG
Sbjct: 2 ATIDVINQTGAVVGSIELNDAVFGIEPHQQAMYDALVMQMASRRQGTADTKGRSEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS R GGG VFG PR+++ +INKK +RLA+ +A++
Sbjct: 62 RKPYRQKGTGRARQGSIRATQFRGGGTVFGATPRNYAYRINKKVRRLAVKSALSEKVQET 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKM 229
V+++F+ PKTK F+ + + +K F+V + E NV S+RNI +
Sbjct: 122 AFSVLDKFE--IAEPKTKTFVSIIE--AIQAPKKTLFVVADSEEATNVYLSARNIAGATV 177
Query: 230 LTPRTLNLFDILDAETLVLTPSTV 253
+ +N +D+++A +V+T + V
Sbjct: 178 MAASAINTYDLVNANKVVMTSAAV 201
>gi|406671684|ref|ZP_11078923.1| 50S ribosomal protein L4 [Facklamia hominis CCUG 36813]
gi|405580934|gb|EKB54993.1| 50S ribosomal protein L4 [Facklamia hominis CCUG 36813]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + AV+ A++ + R+GT + R V GGGRKP+ QK T
Sbjct: 11 GTQAGEVALNEAIFGVEPNEAVIFEAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+++ ++ + +VV+E
Sbjct: 71 GRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLALNSVLSQKVLDQKFVVVDEL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE P+TKEF + + ++ K T LV+E +E S+RNI +K++ +N+ D
Sbjct: 130 -VFEAPRTKEFKQVLANLNINSK---TLLVLEGDNEAAYLSARNIPNVKVIDDENVNVLD 185
Query: 240 ILDAETLVLTPSTV 253
+++A+ +++T + +
Sbjct: 186 VINADQVLITKAAL 199
>gi|375360807|ref|YP_005128846.1| 50S ribosomal protein L4 BL4 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421733049|ref|ZP_16172164.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451348493|ref|YP_007447124.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens IT-45]
gi|371566801|emb|CCF03651.1| 50S ribosomal protein L4 BL4 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407073090|gb|EKE46088.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449852251|gb|AGF29243.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens IT-45]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G G+ L+ + +VV A++ + R+G+ R EVRGGGRKP+ QK
Sbjct: 10 NGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHKVKNRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVNDNNIIVLEDL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D
Sbjct: 130 T--LDTVKTKEMAAVLK--GLSVEKKALIVTADANEAVSLSARNIPGVTVVQANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+++ E L++T + V+
Sbjct: 186 VVNHEKLLITKAAVE 200
>gi|312899044|ref|ZP_07758428.1| ribosomal protein L4/L1 family protein [Megasphaera micronuciformis
F0359]
gi|310619829|gb|EFQ03405.1| ribosomal protein L4/L1 family protein [Megasphaera micronuciformis
F0359]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 58 SFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQ 117
+ G + GE L+ + AV+ +A++ + N+R GT +T TRG VRGGGRKP+ Q
Sbjct: 8 NIAGAQTGEMELNDSVFGVEVNEAVMRQAVLRQLANERLGTHATKTRGLVRGGGRKPWKQ 67
Query: 118 KKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVE 177
K TGRAR GS R+PL GGG VFGP+PR + K+ +K +RLA+ +A++ V++
Sbjct: 68 KGTGRARVGSTRSPLWVGGGTVFGPQPRSYEQKMPRKARRLAVKSALSDKVNTNELFVLD 127
Query: 178 EFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNL 237
E PKTKE ++ + + ++ + + E + + +RN+ +K ++ +N+
Sbjct: 128 EI--VLAAPKTKEVVKVVDNFKFSGEK--VLFITDGDEVMARCARNLQGVKSVSTENMNI 183
Query: 238 FDILDAETLVLTPSTV 253
FD+L L +T S V
Sbjct: 184 FDLLHYTKLFITKSAV 199
>gi|298531084|ref|ZP_07018485.1| ribosomal protein L4/L1e [Desulfonatronospira thiodismutans ASO3-1]
gi|298509107|gb|EFI33012.1| ribosomal protein L4/L1e [Desulfonatronospira thiodismutans ASO3-1]
Length = 206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S +++GE L + ++H+A+ R GT R + GGGRKP+
Sbjct: 6 VYSQDNQEVGEIDLQENVFSVSVKPELMHQAVRAHRAAVRSGTVGVKNRALISGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR G+ R+PL GG V+ GPK RD+SIK+NKK +RLA+ A+++ A + +
Sbjct: 66 RQKGTGRARAGTGRSPLWRGGAVIHGPKARDYSIKLNKKVRRLALKMALSTKYAQDKLQI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
++ D R +TK+F+ GL +K + E S N+E S+RN+ ++++T ++
Sbjct: 126 LDNLD--LSRIRTKDFVSIKNNLGL---KKPLIVTAEKSNNLELSARNVPGVEVITQDSI 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYG 261
N++++L + LV+ V+ L R G
Sbjct: 181 NVYEVLKHQELVMDKQAVEKLQERLG 206
>gi|407717667|ref|YP_006795072.1| 50S ribosomal protein L4 [Leuconostoc carnosum JB16]
gi|407241423|gb|AFT81073.1| 50S ribosomal protein L4 [Leuconostoc carnosum JB16]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT S R V GGG
Sbjct: 2 TKVAVLKQDGSQATEIELNDTVFAIEPNNAVITDAVLMQRASMRQGTHSVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ +
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPTPRSYAYRINRKAYQLALKSVLSQKVSDG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + L K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FEAPKTQDFKKVLTN--LSASTKTLVVVDEDNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|400289615|ref|ZP_10791643.1| 50S ribosomal protein L4 [Streptococcus ratti FA-1 = DSM 20564]
gi|399922000|gb|EJN94816.1| 50S ribosomal protein L4 [Streptococcus ratti FA-1 = DSM 20564]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ G+ L+ + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGQVTLNDAVFGIEPNESVVFDVVISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE PKTKEF +A+ +D K ++ E +E E S+RN+ +K+ T T ++ D
Sbjct: 130 S--FEAPKTKEFAQALAALSID--SKVLVILEEGNEFAELSARNLPNVKVATAATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++++ L++T +
Sbjct: 186 IVNSDKLLVTKEAI 199
>gi|377556485|ref|ZP_09786190.1| 50S ribosomal protein L4 [Lactobacillus gastricus PS3]
gi|376168413|gb|EHS87187.1| 50S ribosomal protein L4 [Lactobacillus gastricus PS3]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 86 ALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR 145
A++ + R+GT + R VRGGG+KP+ QK TGRAR+GS R P GGG+VFGP PR
Sbjct: 36 AILRQRASMRQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRAPQFRGGGIVFGPTPR 95
Query: 146 DWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQK 205
++ + +K ++LAI +A+ AEN +VV+ + F+ PKTKEF M L +K
Sbjct: 96 SYNYALPRKVRQLAIKSALTQKVNAENFVVVDSIN--FDAPKTKEFAGVMN--NLKVTEK 151
Query: 206 ATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+V + +N + S RN+ L ++TP +N+ +++DA+ +V+T S +
Sbjct: 152 TLVVVTDDDKNAQLSGRNLPNLTVVTPAGVNILNVVDAQKIVVTKSAL 199
>gi|408371662|ref|ZP_11169424.1| 50S ribosomal protein L4 [Galbibacter sp. ck-I2-15]
gi|407742910|gb|EKF54495.1| 50S ribosomal protein L4 [Galbibacter sp. ck-I2-15]
Length = 209
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK QK TG AR GS ++P+ GGG +FGP+P+D++ K
Sbjct: 41 LANQRQGTHKSKERAEIAGSTRKIKKQKGTGTARAGSIKSPIFKGGGRIFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A++ A ++ IVVE+F+ FE PKTKEF ++ GL+ K K+ F++
Sbjct: 101 LNKNVKRLARKSALSLKAQDKSIIVVEDFN--FETPKTKEFTNVLKALGLESK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ + NV SSRN+ T +++T LN + I++A ++VL +++
Sbjct: 158 GDSNNNVYLSSRNLKTSEVVTTSELNTYKIVNANSIVLFEGSIE 201
>gi|427393126|ref|ZP_18887029.1| 50S ribosomal protein L4 [Alloiococcus otitis ATCC 51267]
gi|425730708|gb|EKU93540.1| 50S ribosomal protein L4 [Alloiococcus otitis ATCC 51267]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G++ GE L+ + V++ A+I ++R+GT S R VRGGGRKP+
Sbjct: 6 VFNQEGKENGEITLNDTIFGVEPNDNVLYDAIIMQQASQRQGTHSVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GSN +P+ GGGVVFGP PR +S K+ KK +RLAI +A++ V
Sbjct: 66 RQKGTGRARHGSNTSPIWRGGGVVFGPTPRSYSYKLPKKVRRLAILSALSQKVIDSELSV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ + F++PKTK+F + + +D +KA ++ + +E S+RNI +K++ P +
Sbjct: 126 IDKLE--FDKPKTKDFRALLDQLEVD--RKALVVLEKDNEFAALSARNIPGVKVVAPDNV 181
Query: 236 NLFDILDAETLVLTPSTVD 254
++ D++ + L+LT + ++
Sbjct: 182 SVLDVVGHDDLILTQAALE 200
>gi|182412050|ref|YP_001817116.1| 50S ribosomal protein L4 [Opitutus terrae PB90-1]
gi|177839264|gb|ACB73516.1| ribosomal protein L4/L1e [Opitutus terrae PB90-1]
Length = 210
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 112/206 (54%), Gaps = 4/206 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + S K E L + D V ++ N R+GT ST TRGEVRGGG+K
Sbjct: 3 LTVFSPDATKSTEQDFTLPTFEGDKGLQAVKEVIVAINANNRQGTHSTKTRGEVRGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+PL GGGVVFGPKPRD+S KIN K K+LA S A+ A+A
Sbjct: 63 PWRQKGTGRARAGSIRSPLWGGGGVVFGPKPRDYSKKINAKVKQLAFSRALFDRASAGEI 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+E FD K KTK F + + R + PK K + + ++SRN+ + +
Sbjct: 123 AVIEAFDSK--ATKTKAFNQILGR--IAPKGKVLLVDAPFAAEAARASRNLERVTLQEAA 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGR 259
LN D+ + ++++ ++ + R
Sbjct: 179 KLNTLDLAQYQKIIVSSKALEAIIAR 204
>gi|238855069|ref|ZP_04645397.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
269-3]
gi|238832313|gb|EEQ24622.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
269-3]
Length = 205
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ TG+ GE L+ + VV A+I R+GT +T R VRGGG+K
Sbjct: 4 LKLIDQTGKDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ + +K +RLAI + ++ N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKARRLAIKSVLSQKLQDNNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + PKTKEF + +D K LV+ +ENV+ S+RN+ +K++
Sbjct: 124 IVLDQL--SLDAPKTKEFKAVLGNLNVDSK----VLVVSDNENVQLSARNLENVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ + L+LT V
Sbjct: 178 GLNVVDAVNYDKLILTQDAV 197
>gi|332881057|ref|ZP_08448725.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680969|gb|EGJ53898.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 209
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 110/175 (62%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FG
Sbjct: 32 VVYLDVKRYLANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+P+D++ K+ K KRLA +A+++ A +++ +V+E+F+ FE PKTK+F ++ GL+
Sbjct: 92 PRPKDYTQKLTKNVKRLARRSALSAKAQSQSLVVLEDFN--FEAPKTKDFTAVVKSLGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K K+ F++ V+ NV SSRN+ ++T LN + ++ A +VLT S V+ +
Sbjct: 150 NK-KSLFVLPNVNNNVYLSSRNVANSSVVTASELNTYQVVYANNIVLTESAVEVI 203
>gi|212704584|ref|ZP_03312712.1| hypothetical protein DESPIG_02646 [Desulfovibrio piger ATCC 29098]
gi|212671983|gb|EEB32466.1| 50S ribosomal protein L4 [Desulfovibrio piger ATCC 29098]
Length = 207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
Query: 90 DMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSI 149
M KR GT TR V GGG KP+ QK TGRAR GSNR+P+ GG +VFGP+PRD+S
Sbjct: 40 QMAAKRAGTHMAKTRAFVSGGGVKPWKQKGTGRARSGSNRSPVWRGGAIVFGPQPRDYSF 99
Query: 150 KINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL 209
K+N K + LA+ A++S AAEN +VV+ + KTK F + GL+ KA +
Sbjct: 100 KVNSKVRALAMKMALSSRLAAENLLVVKGIE--LPEAKTKHFAKVAGTLGLN---KALIV 154
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
E SE + +S+RNI + + TP L++ +IL + LVL V + R+
Sbjct: 155 TAEESEALTRSARNIPGITLTTPDRLSVLEILRHKQLVLLEGAVAPVQARF 205
>gi|379012690|ref|YP_005270502.1| 50S ribosomal protein L4 [Acetobacterium woodii DSM 1030]
gi|375303479|gb|AFA49613.1| 50S ribosomal protein L4 [Acetobacterium woodii DSM 1030]
Length = 206
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT S LTR EVRGGGRKP+ QK TGRAR G+ R+PL GGGV+F PK RD+S K
Sbjct: 41 LANRRQGTRSALTRSEVRGGGRKPWRQKGTGRARAGTIRSPLWKGGGVIFAPKSRDYSKK 100
Query: 151 INKKEKRLAISTAIASAAAAENTI-VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL 209
+NKK K LAI + + SA EN I V+ + E PKTKE I + QKA +
Sbjct: 101 VNKKVKTLAIKS-VFSAKVLENEIRVLNQL--VMEAPKTKEMISVLNNIN---AQKALIV 154
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+ + +E V +S+ NI + T LN++D+L + L++T ++ + Y
Sbjct: 155 LPDNNEAVIRSANNIPKVATTTVNELNVYDMLKYDVLIMTQEALEKIEEVYA 206
>gi|296111430|ref|YP_003621812.1| 50S ribosomal protein L4 [Leuconostoc kimchii IMSNU 11154]
gi|339491299|ref|YP_004705804.1| 50S ribosomal protein L4 [Leuconostoc sp. C2]
gi|295832962|gb|ADG40843.1| 50S ribosomal protein L4 [Leuconostoc kimchii IMSNU 11154]
gi|338852971|gb|AEJ31181.1| 50S ribosomal protein L4 [Leuconostoc sp. C2]
Length = 207
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 118/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + V+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAELELNDAVFAIEPNNTVITDAVLMQRASMRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVAEG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ FE PKT++F + + D K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDAL--TFEAPKTQDFKKVLTNLAADT--KTLVVVDENNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|227501135|ref|ZP_03931184.1| ribosomal protein L4 [Anaerococcus tetradius ATCC 35098]
gi|227216720|gb|EEI82121.1| ribosomal protein L4 [Anaerococcus tetradius ATCC 35098]
Length = 207
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 110/200 (55%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL+ GE +G L+ + + V+ + + NKR+GT S TR EVRGGGRK
Sbjct: 4 VDILNIKGENVGSLELNETLFNTEISEHAVYEVVKNQLANKRQGTQSAKTRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVF PKPRD+S K+ KK +R A+ + + S
Sbjct: 64 PFRQKGTGRARQGSIRAPHYTGGGVVFAPKPRDYSYKVPKKLRRKALYSVLTSKLNDNEL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ E KTKE ++ + ++ +KA + E V +S RNI + +
Sbjct: 124 VVLDSLS--LENAKTKEAVKVLE--AVNAGKKAYVVTAENDTLVYRSFRNIEGVDVAAAS 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++D++ LV+T +
Sbjct: 180 LINVYDLVRHNKLVITKDAI 199
>gi|331703715|ref|YP_004400402.1| 50S ribosomal protein L4 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|256384085|gb|ACU78655.1| ribosomal protein L4/L1 family [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384917|gb|ACU79486.1| ribosomal protein L4/L1 family [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455249|gb|ADH21484.1| ribosomal protein L4/L1 family [synthetic Mycoplasma mycoides
JCVI-syn1.0]
gi|328802270|emb|CBW54424.1| 50S ribosomal protein L4 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 208
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G ++ E L+ + + ++ +I+ R+GT TR EV GGGRK
Sbjct: 3 LQVLDIKGNEVKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGV FGP P ++ +NKK + LA + ++ N
Sbjct: 63 PWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++F+ F +P TKE + M+ +D QK + E E V KSS NI +K ++
Sbjct: 123 LVIVDKFE--FAKPSTKEMVVVMKNLKIDD-QKTLIVTKEKEELVVKSSNNITGVKTISA 179
Query: 233 RTLNLFDILDAETLVLT 249
LN+FD+L+A L++T
Sbjct: 180 NQLNVFDLLNATKLLIT 196
>gi|347537380|ref|YP_004844805.1| 50S ribosomal protein L4 [Flavobacterium branchiophilum FL-15]
gi|345530538|emb|CCB70568.1| 50S ribosomal protein L4 [Flavobacterium branchiophilum FL-15]
Length = 209
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 114/202 (56%), Gaps = 4/202 (1%)
Query: 54 LPILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ +L F G+ G + L A + + V+ + + N+R+GT R EV G R
Sbjct: 3 VKVLDFNGKDTGRKVQLSDSVFAIEPNKHAVYLDVKQYLANQRQGTHKAKERAEVAGSTR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K QK TG AR GS ++PL GGG VFGP+PR +S K+NK KRLA +A + A N
Sbjct: 63 KIKKQKGTGTARAGSKKSPLFKGGGTVFGPRPRSYSFKLNKNLKRLARKSAFSIKAKESN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
IVVE+F FE P TK F ++ GL+ K K+ F++ + ++NV SSRN+ ++T
Sbjct: 123 IIVVEDFS--FEAPSTKNFTNVLKALGLENK-KSLFVLGDSNKNVYLSSRNLKASSVVTN 179
Query: 233 RTLNLFDILDAETLVLTPSTVD 254
L+ + IL+A LVL +++
Sbjct: 180 SELSTYAILNANNLVLLEGSLE 201
>gi|154684635|ref|YP_001419796.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens FZB42]
gi|308172008|ref|YP_003918713.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens DSM 7]
gi|384157730|ref|YP_005539803.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens TA208]
gi|384263747|ref|YP_005419454.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385267144|ref|ZP_10045231.1| 50S ribosomal protein L4 [Bacillus sp. 5B6]
gi|429503651|ref|YP_007184835.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452854179|ref|YP_007495862.1| ribosomal protein L4 [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|166234633|sp|A7Z0N9.1|RL4_BACA2 RecName: Full=50S ribosomal protein L4
gi|154350486|gb|ABS72565.1| RplD [Bacillus amyloliquefaciens FZB42]
gi|307604872|emb|CBI41243.1| ribosomal protein L4 [Bacillus amyloliquefaciens DSM 7]
gi|328551818|gb|AEB22310.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens TA208]
gi|380497100|emb|CCG48138.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385151640|gb|EIF15577.1| 50S ribosomal protein L4 [Bacillus sp. 5B6]
gi|429485241|gb|AFZ89165.1| 50S ribosomal protein L4 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452078439|emb|CCP20189.1| ribosomal protein L4 [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 207
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G G+ L+ + +VV A++ + R+G+ R EVRGGGRKP+ QK
Sbjct: 10 NGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHKVKNRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVNDNNIIVLEDL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D
Sbjct: 130 T--LDTVKTKEMAAILK--GLSVEKKALIVTADANEAVSLSARNIPGVTVVQANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+++ E L++T + V+
Sbjct: 186 VVNHEKLLITKAAVE 200
>gi|126662263|ref|ZP_01733262.1| 50S ribosomal protein L4 [Flavobacteria bacterium BAL38]
gi|126625642|gb|EAZ96331.1| 50S ribosomal protein L4 [Flavobacteria bacterium BAL38]
Length = 209
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+G R EV G RK QK TG AR GS + PL GGG VFGP+PR +S K
Sbjct: 41 LANQRQGNHKAKERAEVAGSTRKIKKQKGTGTARAGSAKNPLFKGGGTVFGPRPRSYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A++ N +VVE+F F+ P TK FI ++ GLD K K+ F++
Sbjct: 101 LNKNLKRLARKSALSLKVNESNLVVVEDFT--FDTPSTKNFINVLKSLGLDNK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ ++NV SSRN+ ++T L+ + IL+A++LVL VD
Sbjct: 158 GDSNKNVYLSSRNLKASSVVTTSELSTYAILNAKSLVLLEGAVD 201
>gi|374853563|dbj|BAL56468.1| 50S ribosomal protein L4 [uncultured prokaryote]
Length = 209
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 3/201 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ + G+ +GE L+ + +V+HR ++ ++ ++R+GT STLTRGEVRGGGRKP+
Sbjct: 6 VYNAQGQPVGEMELNPTLFSRTAKVSVLHRVVVAELAHQRQGTHSTLTRGEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GG+V GPKPRD++ +NKKE+R A + A+ A + +
Sbjct: 66 RQKHTGRARQGSIRAPQWRHGGIVHGPKPRDYNPLVNKKERRQAFAAALTDKAESGALRI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VEE + F KTK ++ + + G + + L+ + +E V KS RN+ + +
Sbjct: 126 VEELN--FPEIKTKHALQFLTQLGAN-DGRVLVLLDQPNETVYKSFRNLPNVLVRIAPAF 182
Query: 236 NLFDILDAETLVLTPSTVDFL 256
L +++ A ++ T + + L
Sbjct: 183 ALHELIPARHVIATKAALQKL 203
>gi|398813175|ref|ZP_10571877.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
BC25]
gi|398039336|gb|EJL32474.1| 50S ribosomal protein L4, bacterial/organelle [Brevibacillus sp.
BC25]
Length = 207
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + +G ++GE L + AV++ A++ ++R+GT R EVRGGGRK
Sbjct: 4 VALYNQSGSQVGEIDLADSVFGIEPNSAVLYDAIVMQQASQRQGTHDVKNRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR + K+N+K +RLA+ +A+++ +
Sbjct: 64 PWRQKGTGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSAKVQSNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V+E + PKTKE + L +K + E +NV +SRNI K++
Sbjct: 124 LVLEALN--IAAPKTKEMTVVLN--NLKADRKVLIVTSEYDQNVALASRNIPGAKIVDAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D++ + +++T +
Sbjct: 180 GINVLDLVAHDKVIVTKEAI 199
>gi|346223805|ref|ZP_08844947.1| 50S ribosomal protein L4 [Anaerophaga thermohalophila DSM 12881]
Length = 209
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 14/207 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
L +++ G++ G K PD+ + A+ D++ N R+GT R E+
Sbjct: 3 LNVVNIQGQETGR-----KVQLPDSVFGIEPNDHAIYLDVKQYLANNRQGTHKAKERAEI 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK QK TG AR GS ++P+ GGG FGPKPRD+ K+NKK K+LA +A+A
Sbjct: 58 AGSTRKIKRQKGTGTARAGSIKSPVFRGGGRAFGPKPRDYRFKLNKKLKQLARKSALAYK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A +VVE+F K E PKTKEF+ + LD K K + E+ NV SSRN+
Sbjct: 118 ARNNAIVVVEDF--KLEAPKTKEFVSIRKNLNLDGK-KTLMIFREIDRNVYLSSRNVPKT 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVD 254
++ T LN ++I++A++LVL S+V+
Sbjct: 175 QVFTLSGLNTYNIMNAQSLVLAESSVE 201
>gi|260664854|ref|ZP_05865705.1| ribosomal protein L4/L1 [Lactobacillus jensenii SJ-7A-US]
gi|297205088|ref|ZP_06922484.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
JV-V16]
gi|260561337|gb|EEX27310.1| ribosomal protein L4/L1 [Lactobacillus jensenii SJ-7A-US]
gi|297149666|gb|EFH29963.1| ribosomal protein L4/L1 family protein [Lactobacillus jensenii
JV-V16]
Length = 205
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ TG+ GE L+ + VV A+I R+GT +T R VRGGG+K
Sbjct: 4 LKLIDQTGKDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ + +K +RLAI + ++ N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKVRRLAIKSVLSQKLQDNNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + PKTKEF + +D K LV+ +ENV+ S+RN+ +K++
Sbjct: 124 IVLDQL--SLDAPKTKEFKAVLGNLNVDSK----VLVVSDNENVQLSARNLENVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ + L+LT V
Sbjct: 178 GLNVVDAVNYDKLILTQDAV 197
>gi|392530552|ref|ZP_10277689.1| 50S ribosomal protein L4 [Carnobacterium maltaromaticum ATCC 35586]
gi|414085645|ref|YP_006994359.1| 50S ribosomal protein L4 [Carnobacterium maltaromaticum LMA28]
gi|412999235|emb|CCO13044.1| 50S ribosomal protein L4 [Carnobacterium maltaromaticum LMA28]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + VV A+I + R+G S R VRGGGRKP+ QK T
Sbjct: 11 GTQNGEVTLNDAIFGIEPNENVVFDAIIMQRASLRQGNHSVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + +++ A N IVV+ +
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSTKVAENNLIVVDALN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTKEF + ++ +D QK +V ++ S+RN+ +K++T + + D+
Sbjct: 131 --FDAPKTKEFAQVLKNLNVD--QKVLVVVESDNDFATLSARNLPGVKVVTHDGITVLDV 186
Query: 241 LDAETLVLTPSTV 253
+ ++LT + +
Sbjct: 187 VSNVKMILTQTAL 199
>gi|398309219|ref|ZP_10512693.1| 50S ribosomal protein L4 [Bacillus mojavensis RO-H-1]
gi|443634988|ref|ZP_21119159.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443345179|gb|ELS59245.1| 50S ribosomal protein L4 [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G G+ L+ + +VV A++ + R+G+ R EVRGGGRKP+ QK
Sbjct: 10 NGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHKVKNRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVNDNNIIVLEDL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D
Sbjct: 130 T--LDTAKTKEMAAILK--GLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+++ E L++T + V+
Sbjct: 186 VVNHEKLLITKAAVE 200
>gi|365905476|ref|ZP_09443235.1| 50S ribosomal protein L4 [Lactobacillus versmoldensis KCTC 3814]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A+I R+GT R EVRGGG+KP+ QK TGRAR+GS R+P GGG VFG
Sbjct: 32 VVTDAVIMQRATLRQGTHDVKNRSEVRGGGKKPWRQKGTGRARQGSIRSPQWVGGGTVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ + +K RLA+ + ++ AA N IV++ F++P TK F + + + G D
Sbjct: 92 PTPRSYAYHLPRKVSRLALKSVLSQKAADGNMIVIDSI--SFDKPSTKSFAQLLNQVGAD 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
KA ++ + ++N S+RNI + ++ P +N+ D+++A+ LV+T + +
Sbjct: 150 G--KALVVLEDGNDNAALSARNIDKVTVVAPEGVNVLDVINAKKLVVTQAAL 199
>gi|21674997|ref|NP_663062.1| 50S ribosomal protein L4 [Chlorobium tepidum TLS]
gi|46577274|sp|Q8KAH3.1|RL4_CHLTE RecName: Full=50S ribosomal protein L4
gi|21648230|gb|AAM73404.1| ribosomal protein L4 [Chlorobium tepidum TLS]
Length = 208
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 119/197 (60%), Gaps = 6/197 (3%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ G + GE L+ + A + + ++ + + N+R+GT TR EVRGGG+
Sbjct: 3 LKVLNIQGAETGEVVTLNDEIFAVEVSEHAMYLDVKAILANRRQGTHKAKTRAEVRGGGK 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TG AR+GS R+ L GGG +FGP+PR + K+N+K K+LA +A+++ AAA
Sbjct: 63 KPFRQKGTGNARQGSTRSGLMVGGGAIFGPQPRTYDQKVNRKVKQLARRSALSAKAAAGQ 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSS-RNIGTLKMLT 231
+VV++F FE KT+ + ++ GL +K T L+M +NV +S RNI L ++
Sbjct: 123 IVVVDDFS--FEAIKTRPVADMLKNLGL--AEKKTLLMMPHHDNVVSTSGRNIEKLNVMV 178
Query: 232 PRTLNLFDILDAETLVL 248
+ +DIL+++ ++
Sbjct: 179 ADQASTYDILNSQVVLF 195
>gi|406668997|ref|ZP_11076285.1| 50S ribosomal protein L4 [Facklamia ignava CCUG 37419]
gi|405584680|gb|EKB58563.1| 50S ribosomal protein L4 [Facklamia ignava CCUG 37419]
Length = 206
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
+VV A+I + R+GT + R +VRGGGRKP+ QK TGRAR+GS R+P GGGVVF
Sbjct: 31 SVVFDAVIMQRASMRQGTHAVKNRSQVRGGGRKPWRQKGTGRARQGSIRSPQWVGGGVVF 90
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR ++ K+ KK +RLAI +A++ AA + V+E FE PKTK F + + L
Sbjct: 91 GPTPRSYAYKLPKKVRRLAIRSALSMKAAEDQIKVIEGL--AFEAPKTKAFKDILTNLNL 148
Query: 201 DPKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
T +V+E ++N S+RN+ +K++ R +N+ D+++ +T+++T ++
Sbjct: 149 GK----TLVVLEGDNDNAYLSARNLPNVKVIDERNVNVLDVVNYDTILITKQALE 199
>gi|344204900|ref|YP_004790042.1| 50S ribosomal protein L4 [Mycoplasma putrefaciens KS1]
gi|343956823|gb|AEM68538.1| ribosomal protein L4 [Mycoplasma putrefaciens KS1]
Length = 208
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G ++ E L+ + + ++ ++ R+GT TR EV GGGRK
Sbjct: 3 IQVLNIKGNQVKEITLNDNVWGIEPHQQAIYDTVVAQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGVVFGP P +++ +NKK + LA +A++ A N
Sbjct: 63 PWKQKGTGRARQGSIRAPQWRGGGVVFGPTPNINYTKSVNKKVRALAFRSALSLKAKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++F+ F +P TKE + ++ +D QK + + + V KS+ NI +K L
Sbjct: 123 LVIVDKFE--FSKPSTKEMVMVIKDLKIDD-QKVLIVTKDKEQLVIKSANNISKVKTLAA 179
Query: 233 RTLNLFDILDAETLVLT 249
LN++D+L+A L++T
Sbjct: 180 NQLNVYDLLNATKLLIT 196
>gi|373110805|ref|ZP_09525067.1| 50S ribosomal protein L4 [Myroides odoratimimus CCUG 10230]
gi|423132065|ref|ZP_17119715.1| 50S ribosomal protein L4 [Myroides odoratimimus CCUG 12901]
gi|423136179|ref|ZP_17123824.1| 50S ribosomal protein L4 [Myroides odoratimimus CIP 101113]
gi|423329948|ref|ZP_17307754.1| 50S ribosomal protein L4 [Myroides odoratimimus CCUG 3837]
gi|371639384|gb|EHO05002.1| 50S ribosomal protein L4 [Myroides odoratimimus CIP 101113]
gi|371640102|gb|EHO05708.1| 50S ribosomal protein L4 [Myroides odoratimimus CCUG 12901]
gi|371641681|gb|EHO07261.1| 50S ribosomal protein L4 [Myroides odoratimimus CCUG 10230]
gi|404602856|gb|EKB02543.1| 50S ribosomal protein L4 [Myroides odoratimimus CCUG 3837]
Length = 209
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT R E+ G RK QK TG AR GS ++P+ GGG +FGP+PR +S K
Sbjct: 41 LANQRQGTHKAKERAEISGSTRKIKKQKGTGTARAGSIKSPVFRGGGRIFGPRPRSYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A + N IVVE F+ FE P TK FI ++ GL+ K K+ F+
Sbjct: 101 LNKSLKRLARKSAFSIKVKESNLIVVENFN--FEAPSTKNFINVLKGLGLENK-KSLFVF 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
E ++NV SSRN+G ++T L+ + IL+A +LVLT +V
Sbjct: 158 GESNKNVYLSSRNLGKAAVVTNSELSTYSILNAGSLVLTEGSV 200
>gi|418620363|ref|ZP_13183169.1| 50S ribosomal protein L4 [Staphylococcus hominis VCU122]
gi|374822971|gb|EHR86983.1| 50S ribosomal protein L4 [Staphylococcus hominis VCU122]
Length = 207
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ N I+
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENNFII 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F F+ PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FDAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVSTAQGL 181
Query: 236 NLFDILDAETLVLTPS 251
N+ DI A+++++T S
Sbjct: 182 NVLDITSADSVIITES 197
>gi|288801099|ref|ZP_06406555.1| ribosomal protein L4/L1 family protein [Prevotella sp. oral taxon
299 str. F0039]
gi|288332033|gb|EFC70515.1| ribosomal protein L4/L1 family protein [Prevotella sp. oral taxon
299 str. F0039]
Length = 209
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GTA + R E+ G RK QK G ARRG +PL GGG VFGPKPRD+ K
Sbjct: 41 LANQRQGTAKSKERSEISGSTRKLGRQKGGGGARRGDINSPLLVGGGRVFGPKPRDYRFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A +++E+F+ E PKTKEF+ ++ +D K K L+
Sbjct: 101 LNKKVKTLARKSALSYKAQESAIMILEDFN--LEAPKTKEFVNVVKNLKIDSK-KVLLLL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258
EV++NV S+RN+ +++ TLN + +L+A+ LV T +++ ++G
Sbjct: 158 PEVNKNVYLSARNLQRSEVMLASTLNAYKVLNADVLVFTEKSLEVVDG 205
>gi|313888849|ref|ZP_07822510.1| 50S ribosomal protein L4 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845218|gb|EFR32618.1| 50S ribosomal protein L4 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 207
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 5/183 (2%)
Query: 74 AAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLR 133
AAP + AV + + + NKR+GT S TR EVRGGGRKP+ QK TGRAR+GS R+P
Sbjct: 25 AAPVSTHAV-YLVVKNILANKRQGTHSAKTRAEVRGGGRKPWRQKGTGRARQGSIRSPQW 83
Query: 134 PGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIE 193
GGGVVF KPRD+S KK +R+A+ + + S I+V+ + E KTK F
Sbjct: 84 RGGGVVFAKKPRDYSYTTPKKTRRVALKSVLTSKLQDGEMILVDSI--QMEEAKTKVFAN 141
Query: 194 AMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
++ G +KA +V + ++V++++RNI +K +N++D+L + LV+T S +
Sbjct: 142 ILKNIG--AGKKALVVVNDDEKDVQRAARNIAGVKTSRATDINVYDLLKYDNLVITKSAL 199
Query: 254 DFL 256
D +
Sbjct: 200 DVV 202
>gi|394994788|ref|ZP_10387495.1| 50S ribosomal protein L4 [Bacillus sp. 916]
gi|393804355|gb|EJD65767.1| 50S ribosomal protein L4 [Bacillus sp. 916]
Length = 207
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G G+ L+ + +VV A++ + R+G+ R EVRGGGRKP+ QK
Sbjct: 10 NGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGSHKVKNRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++S N IV+E+
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVNDNNIIVLEDL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ KTKE ++ GL ++KA + + +E V S+RNI + ++ +N+ D
Sbjct: 130 T--LDTVKTKEMAVILK--GLSVEKKALIVTADANEAVSLSARNIPGVTVVQANGINVLD 185
Query: 240 ILDAETLVLTPSTVD 254
+++ E L++T + V+
Sbjct: 186 VVNHEKLLITKAAVE 200
>gi|118411191|ref|YP_874585.1| 50S ribosomal protein L4 [Thalassiosira pseudonana]
gi|125987630|sp|A0T0X3.1|RK4_THAPS RecName: Full=50S ribosomal protein L4, chloroplastic
gi|116739938|gb|ABK20808.1| 50S ribosomal protein L4 [Thalassiosira pseudonana]
Length = 215
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 77 DTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGG 136
D+ ++HR ++ ++++GT ST TR EVRGGG+KP+ QK TGRAR GS+R+PL GG
Sbjct: 34 DSGNYLIHRDILRHQLSQKQGTVSTKTRSEVRGGGKKPWRQKGTGRARAGSSRSPLWKGG 93
Query: 137 GVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMR 196
GV+FGPKP+ ++K+NKKE+ LA+ T + + + I+ + + KTKEF +
Sbjct: 94 GVIFGPKPKTANLKLNKKERNLALQTLLYN----KRDIITQVSTLDIKNVKTKEFYNFCK 149
Query: 197 RWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
G + +K + E + ++ S+RN+ +++++ LN +L A+ +++T S ++
Sbjct: 150 EKGFNLNEKLLVIDSEKTTPLKLSTRNLKNVELISASNLNTLSLLKAKKILVTTSALN 207
>gi|385809497|ref|YP_005845893.1| 50S ribosomal protein L4 [Ignavibacterium album JCM 16511]
gi|383801545|gb|AFH48625.1| Ribosomal protein L4 [Ignavibacterium album JCM 16511]
Length = 215
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 113/204 (55%), Gaps = 4/204 (1%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ +L G K GET L A + ++ + + N+R+GT RGEVRGGG+
Sbjct: 3 VDVLKIDGSKSGETVELSENIFAIEPNDHAIYLDVKAYLANQRQGTHKAKERGEVRGGGK 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK G AR G+ R+PL GGG +FGP+PRD+ + KK K+LA +A++ E
Sbjct: 63 KPWKQKGRGGARAGTIRSPLWVGGGTIFGPRPRDYRQDLPKKVKQLARKSALSYKVKDEQ 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
IVVE+F F++PKTK+F+ + L K K L + V KS RNI +++L
Sbjct: 123 LIVVEDFS--FDKPKTKDFVNVLESLKLSGK-KVLLLTGDYKPEVYKSGRNIPKVQILEA 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFL 256
+D+L+ + LV+ S V+ +
Sbjct: 180 AKATTYDLLNNQVLVMQKSAVNVI 203
>gi|159901427|ref|YP_001547674.1| 50S ribosomal protein L4 [Herpetosiphon aurantiacus DSM 785]
gi|159894466|gb|ABX07546.1| ribosomal protein L4/L1e [Herpetosiphon aurantiacus DSM 785]
Length = 209
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H+A+I + N R GT ST TRGEVRG RK Y QK TGRAR+G+ R P GGGVV G
Sbjct: 31 VMHQAVIRQLANARLGTHSTKTRGEVRGSTRKLYRQKGTGRARQGAIRAPHHSGGGVVHG 90
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPR ++ + +K +RLA+ +A+ SA AEN I+ + D PKTK+F+ ++ L
Sbjct: 91 PKPRKYTKAMPRKMRRLAVRSAL-SAKYAENQIIFLD-DLSLNAPKTKDFLALLKNLPL- 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K + E S+N+ S+ N+ +K L LN+ D+L +TL+L S + +
Sbjct: 148 VGDKTLVALGEKSDNITLSASNLPNVKTLLAAYLNVRDLLTYDTLILPKSALSVV 202
>gi|227431340|ref|ZP_03913393.1| ribosomal protein L4 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352933|gb|EEJ43106.1| ribosomal protein L4 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 207
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + +L G + E L+ A + AV+ A++ + R+GT + R V GGG
Sbjct: 2 TKVAVLKQDGSQAAEIELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR GS R P GGG+VFGP PR ++ +IN+K +LA+ + ++ A
Sbjct: 62 RKPWKQKGTGRARAGSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVADN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+ F+ PKT++ + + D +K +V E +EN S+RN+ ++++T
Sbjct: 122 KLVVVDALS--FKAPKTQDLKKVLANLSAD--KKTLVVVDEDNENAILSARNLANVQVMT 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNG 258
+ +N+ D+++A+ LV+ S+++ + G
Sbjct: 178 TKGINVLDVVNADKLVIVQSSIEEIQG 204
>gi|384098720|ref|ZP_09999833.1| 50S ribosomal protein L4 [Imtechella halotolerans K1]
gi|383835163|gb|EID74591.1| 50S ribosomal protein L4 [Imtechella halotolerans K1]
Length = 209
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R EV G RK QK TG AR GS ++P+ GGG +FGP+P+D++ K
Sbjct: 41 LANQRQGTHKSKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A+ A ++ +V+E+F FE+PKTK+F+ ++ GLD K K+ F++
Sbjct: 101 LNKNVKRLARKSALTLKAKEQSIVVLEDFS--FEQPKTKDFVNVLKALGLDAK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVL 248
+ + NV SSRN+ +++T LN + IL+A +VL
Sbjct: 158 GDSNNNVYLSSRNLKASEVVTTSELNTYKILNANNVVL 195
>gi|256852037|ref|ZP_05557424.1| ribosomal protein L4/L1 [Lactobacillus jensenii 27-2-CHN]
gi|260661394|ref|ZP_05862307.1| ribosomal protein L4/L1 [Lactobacillus jensenii 115-3-CHN]
gi|256615449|gb|EEU20639.1| ribosomal protein L4/L1 [Lactobacillus jensenii 27-2-CHN]
gi|260547849|gb|EEX23826.1| ribosomal protein L4/L1 [Lactobacillus jensenii 115-3-CHN]
Length = 205
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ TG+ GE L+ + VV A+I R+GT +T R VRGGG+K
Sbjct: 4 LKLIDQTGKDAGEVTLNDNVFGIEPNENVVFDAVIRQRAGMRQGTHATKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ + +K +RLAI + ++ N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYAYSLPRKVRRLAIKSVLSQKLQDNNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I++++ + PKTKEF + +D K LV+ +ENV+ S+RN+ +K++
Sbjct: 124 IILDQL--SLDAPKTKEFKAVLGNLNVDSK----VLVVSDNENVQLSARNLENVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ + L+LT V
Sbjct: 178 GLNVVDAVNYDKLILTQDAV 197
>gi|410479114|ref|YP_006766751.1| 50S ribosomal protein L4 [Leptospirillum ferriphilum ML-04]
gi|424867728|ref|ZP_18291508.1| Ribosomal protein L4 [Leptospirillum sp. Group II 'C75']
gi|124514442|gb|EAY55955.1| ribosomal protein L4 [Leptospirillum rubarum]
gi|387221782|gb|EIJ76295.1| Ribosomal protein L4 [Leptospirillum sp. Group II 'C75']
gi|406774366|gb|AFS53791.1| ribosomal protein L4 [Leptospirillum ferriphilum ML-04]
Length = 218
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + R GTAST TRGEV GGG+KPY QK TGRAR+GS R P GG ++FG
Sbjct: 32 LLHEIIKMQRAGIRSGTASTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQWRGGAIIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+ + K+ LA+ AI S ++ VV+ D KTK+ I +W L
Sbjct: 92 PRPRDYFYRQPAKKVVLAVKNAIFSHLENKSLYVVDSLD--VPSRKTKDLIALFNKWSLF 149
Query: 202 PKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
P ++ ++ +SEN+ S RNI L++L P +N +D+L A+ ++++ + +N
Sbjct: 150 PGEERILIIDNGLSENIYYSCRNIPGLEILLPHQVNPYDLLIADKVLVSKEAFENMN 206
>gi|297567283|ref|YP_003686255.1| 50S ribosomal protein L4 [Meiothermus silvanus DSM 9946]
gi|296851732|gb|ADH64747.1| ribosomal protein L4/L1e [Meiothermus silvanus DSM 9946]
Length = 211
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 112/195 (57%), Gaps = 8/195 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +LS G+K DL++ P+ V++ + M +R GTA+T TRG V +K
Sbjct: 4 LSVLSAKGQKA----RDLEATLPEVNPHVLYEVVKWQMAKRRAGTAATKTRGMVNFTTKK 59
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
YSQK TGRAR G P+ GGG VFGP+PRD+S + KK ++L ++ A+A A
Sbjct: 60 MYSQKHTGRARHGDYGAPIFVGGGTVFGPQPRDYSYTLPKKVRKLGLAMALADRAKDGKL 119
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
++ E F+G KTKEF+ GLD Q T L++ +E V +++RN+ ++ L P
Sbjct: 120 LIAEGFEG--VNGKTKEFLAWATGAGLDGSQ--TVLLVTANELVRRAARNLPWVRTLAPE 175
Query: 234 TLNLFDILDAETLVL 248
LN++DIL E LVL
Sbjct: 176 GLNVYDILRQEWLVL 190
>gi|78357299|ref|YP_388748.1| 50S ribosomal protein L4 [Desulfovibrio alaskensis G20]
gi|109893592|sp|Q30Z43.1|RL4_DESDG RecName: Full=50S ribosomal protein L4
gi|78219704|gb|ABB39053.1| ribosomal protein L4/L1e [Desulfovibrio alaskensis G20]
Length = 206
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 94 KRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINK 153
KR GT S TR + GGG KP+ QK TGRAR GSNR+P+ GG VVFGP+PRD+S K+NK
Sbjct: 44 KRAGTHSVKTRSTISGGGAKPWRQKGTGRARSGSNRSPVWRGGAVVFGPQPRDYSFKVNK 103
Query: 154 KEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV 213
K ++LA+ A++S A EN +VV+ + KTK ++ GL KA + E+
Sbjct: 104 KVRKLALKMALSSRLAEENLMVVKGIE--LPEVKTKHMVKVAGALGLG---KALVVTPEM 158
Query: 214 SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ + S+RNI + ++TP L++F+IL LVL V+
Sbjct: 159 DDKLVLSARNIPGITLMTPEQLSVFEILKHAQLVLLEGAVE 199
>gi|255530515|ref|YP_003090887.1| 50S ribosomal protein L4 [Pedobacter heparinus DSM 2366]
gi|255343499|gb|ACU02825.1| ribosomal protein L4/L1e [Pedobacter heparinus DSM 2366]
Length = 209
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 16/210 (7%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
+ +L+ +G++ G K P++ + V A+ D++ N+R+GT + R E+
Sbjct: 3 VKVLNISGKETGA-----KVQLPESVFGITPVDHAIYLDVKQYLANQRQGTHKSKQRNEI 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK Y QK TG AR GS ++PL GGG VFGP+PRD+S K+NKK K LA +A++
Sbjct: 58 AGSTRKLYKQKGTGGARAGSIKSPLFNGGGRVFGPQPRDYSFKLNKKLKSLARKSALSYK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV-SENVEKSSRNIGT 226
A N +V+E+F F+ KTK +I + L+ + T LV+ + N+ SSRNI
Sbjct: 118 AKDNNVVVLEDFT--FDTIKTKNYINLVS--ALNLTNEKTLLVLPTQNNNIYLSSRNIQK 173
Query: 227 LKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+K++T LN +D+L+ L+LT +V L
Sbjct: 174 VKVITADQLNTYDVLNCGKLLLTADSVKTL 203
>gi|51598733|ref|YP_072921.1| 50S ribosomal protein L4 [Borrelia garinii PBi]
gi|81609968|sp|Q661E2.1|RL4_BORGA RecName: Full=50S ribosomal protein L4
gi|51573304|gb|AAU07329.1| ribosomal protein L4 [Borrelia garinii PBi]
Length = 209
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA EN
Sbjct: 65 KQKGTGRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
VVE F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VVENFN--IESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFNK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|158520726|ref|YP_001528596.1| 50S ribosomal protein L4 [Desulfococcus oleovorans Hxd3]
gi|226730653|sp|A8ZV58.1|RL4_DESOH RecName: Full=50S ribosomal protein L4
gi|158509552|gb|ABW66519.1| ribosomal protein L4/L1e [Desulfococcus oleovorans Hxd3]
Length = 205
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 6/206 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ I + GE + + L + +V+H + + +R GTAST R +V G K
Sbjct: 4 VDIKNMNGETVSQAELPDSIFDVEVKSSVLHEVVKMQLARRRSGTASTKGRSDVAGSRAK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
+ QK TGRARRG ++PL GGGVVFGP PR + + KK ++LA+ A+ S
Sbjct: 64 LFRQKGTGRARRGDVKSPLLKGGGVVFGPHPRSFDYSVPKKVRKLALKMALTSKLRDNTL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
VV++F +F+R KTK+F+ A+ G ++ + SE +EKS+RN+ +K+L
Sbjct: 124 TVVDQF--RFDRIKTKDFVGAINALG----AANALVISDGSETLEKSARNVPKVKVLKCE 177
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGR 259
LN++DIL + LVL + + + GR
Sbjct: 178 GLNVYDILKYKNLVLPEAAIKMIEGR 203
>gi|383789789|ref|YP_005474363.1| 50S ribosomal protein L4 [Spirochaeta africana DSM 8902]
gi|383106323|gb|AFG36656.1| 50S ribosomal protein L4, bacterial/organelle [Spirochaeta africana
DSM 8902]
Length = 210
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS G+K L+ + + + ++ A+ ++ N R+GTA+T R +V+ GRK
Sbjct: 3 MQVLSVDGKKKKTIQLNDEVFNREVSEGAIYHAIRNELANMRQGTAATKVRSQVKFSGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGG +FGP+PRD+S + +K KRLA + ++ E+
Sbjct: 63 PWRQKGTGRARAGSRRSPIWVGGGTIFGPQPRDYSYVLPRKLKRLAYKSILSQKVQQEDI 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+VVE+F E KTK+ + + + L P ++A +V E V+++ RNI L L +
Sbjct: 123 VVVEDF--ALESGKTKDMVAILSK--LIPAERAVLVVAGNDELVKRAGRNIPWLTTLNYQ 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
L D+ + +V+T S LN Y +
Sbjct: 179 RLRAHDLFYGKKVVMTESAALGLNDFYAAK 208
>gi|219684271|ref|ZP_03539215.1| 50S ribosomal protein L4 [Borrelia garinii PBr]
gi|219672260|gb|EED29313.1| 50S ribosomal protein L4 [Borrelia garinii PBr]
Length = 209
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA EN
Sbjct: 65 KQKGTGRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
VVE F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VVENFN--IESGKTKDLALIIKNFS-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFNK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|380750078|gb|AFE48780.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi]
Length = 207
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G K G L+ A + V+ A+ + R+GT S R EVRGGGRKP+
Sbjct: 6 VVKVNGSKSGSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ V
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSYKVQENGFTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ F+ PKTKEF + L+ +K +V NVE S+RNI +++ T L
Sbjct: 126 VDAFN--FDAPKTKEFKNVLT--NLEQPKKVLVVVEGEDVNVELSARNIPGVQVTTAEGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI A+++++T
Sbjct: 182 NVLDISSADSVIIT 195
>gi|339449249|ref|ZP_08652805.1| 50S ribosomal protein L4 [Lactobacillus fructivorans KCTC 3543]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K G L+ A + VV+ ++ ++R+GT RG+VRGGG+KP+ QK T
Sbjct: 11 GSKQGTVDLNDAVFAVEPNENVVYDTVVMQRASQRQGTNGVKFRGKVRGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGGVVFGP R ++ + KK RLA+ + ++ A ++ +VV+ D
Sbjct: 71 GRARQGSIRAPQWVGGGVVFGPTTRSYAYHLPKKVTRLAVKSVLSEKVANDDLVVVDSLD 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
++ PKTK+ + +++ LD K ++ + +EN +S+RNI ++++ +++N D+
Sbjct: 131 --YKAPKTKDLSDLLKK--LDASTKTLVVLEDNNENAARSARNIENVRVINAKSVNTLDV 186
Query: 241 LDAETLVLTPSTV 253
L++ +V+T + +
Sbjct: 187 LNSNKVVITKAAL 199
>gi|406944937|gb|EKD76572.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 211
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 14/218 (6%)
Query: 50 LASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRG 109
+A + I + G+ +GE L+ K VVH+ +++ N R A T T+GEVRG
Sbjct: 1 MALNVKIFNNEGKVVGEQVLNPKVFGVKVKTDVVHQVVVSQAANVREAIAHTKTKGEVRG 60
Query: 110 GGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAA 168
GGRKP+ QK TGRAR+GS R P GGGVVFGP+ R++S K+NKK KRLA++ A++
Sbjct: 61 GGRKPWKQKGTGRARQGSTRNPQWRGGGVVFGPRSNRNFSQKVNKKMKRLALAMALSDKV 120
Query: 169 AAENTIVVEEFDGKFERPKTKE----FIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRN 223
A E +VV+ KTK+ FI+ L K A L + + NV ++++N
Sbjct: 121 ANEKLLVVDSIS--VPAGKTKQLQNLFIQ------LPCKSAARLLALGAYDSNVIRAAQN 172
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+LN+ D+L + LVL + + + +G
Sbjct: 173 AAATGYCAADSLNVIDVLKYDYLVLDKAAITIIEQTFG 210
>gi|257870518|ref|ZP_05650171.1| ribosomal protein L4 [Enterococcus gallinarum EG2]
gi|357049034|ref|ZP_09110263.1| 50S ribosomal protein L4 [Enterococcus saccharolyticus 30_1]
gi|257804682|gb|EEV33504.1| ribosomal protein L4 [Enterococcus gallinarum EG2]
gi|355384334|gb|EHG31402.1| 50S ribosomal protein L4 [Enterococcus saccharolyticus 30_1]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + VV+ A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGEITLNEEIFGIEPNETVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A+ N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVASNNLVAVEGLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + S+RN+ ++ ++T +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLTIDSK---VLVVLETENDFAALSARNLPSVSVVTADNVSVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ A+ +++T + +
Sbjct: 186 VVSADKMLVTQTAL 199
>gi|354603142|ref|ZP_09021141.1| 50S ribosomal protein L4 [Alistipes indistinctus YIT 12060]
gi|353349019|gb|EHB93285.1| 50S ribosomal protein L4 [Alistipes indistinctus YIT 12060]
Length = 209
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ NKR+GT + R EV G RK QK TG AR GS +PL PGGG VFGP PRD+S K
Sbjct: 41 LANKRQGTHKSKQRNEVMGSTRKLKKQKGTGGARSGSILSPLFPGGGRVFGPVPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K+LA +A+ A VVE+F E PKTKEFI + LD K K ++
Sbjct: 101 LNKKLKQLARKSALTYKAKDNAITVVEDF--AMEAPKTKEFIAITKNLKLDGK-KILVVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
E + V S+RN+ +K++ LN +D+++A +VL ++V+ +N +G+
Sbjct: 158 PETNPVVSLSARNLQNVKVIPASNLNTYDVMNAAGIVLAETSVEAVNQMFGL 209
>gi|326334544|ref|ZP_08200755.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693313|gb|EGD35241.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 209
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R EV G RK QK TG AR GS ++P+ GGG VFGP+P+D++ K
Sbjct: 41 LANQRQGTHKSKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRVFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK KRLA + ++ A IV+E+F+ FE PKTK+F + + G+ K K+ F++
Sbjct: 101 LNKKVKRLARRSVLSQKAQQGAIIVLEDFN--FETPKTKDFTQILAALGIQDK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ ++NV SSRNI ++ +T LN +D+ +A +VL S V+ +
Sbjct: 158 ADTNKNVYLSSRNIPSVNTVTAYELNTYDVANATNVVLLESAVEVI 203
>gi|340758465|ref|ZP_08695051.1| 50S ribosomal protein L4 [Fusobacterium varium ATCC 27725]
gi|251836755|gb|EES65289.1| 50S ribosomal protein L4 [Fusobacterium varium ATCC 27725]
Length = 210
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 9/200 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I TG + G + + +AV+H L ++ R+GTA+T TR VRGGGRK
Sbjct: 4 LNIYDLTGTQTGTVEVKDTVFGIEPNQAVLHEVLTAELAAARQGTAATKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGV FGP PR + K+NKK + LA+ +A+ SA A
Sbjct: 64 PFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSAL-SAKVANGD 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKM 229
I+V DG + PKTK I ++ K F+V +++E N+ S RN+ +
Sbjct: 123 ILV--LDGTIDTPKTKTIIALTN--AINATTKQLFVVNDLAEQADYNLYLSVRNLENAVV 178
Query: 230 LTPRTLNLFDILDAETLVLT 249
L P + ++ +L E ++LT
Sbjct: 179 LQPNEIGVYWLLKQEKVILT 198
>gi|150025406|ref|YP_001296232.1| 50S ribosomal protein L4 [Flavobacterium psychrophilum JIP02/86]
gi|166234666|sp|A6GZ98.1|RL4_FLAPJ RecName: Full=50S ribosomal protein L4
gi|149771947|emb|CAL43421.1| 50S ribosomal protein L4 [Flavobacterium psychrophilum JIP02/86]
Length = 209
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 4/202 (1%)
Query: 54 LPILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+ +L+ G++ G + L A + + V+ + + N+R+GT R EV G R
Sbjct: 3 VKVLNINGKETGRKVQLSDSVFAIEPNKHAVYLDVKQYLANQRQGTHKAKERAEVAGSTR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K QK TG AR GS + PL GGG VFGP+PR +S K+NK KRLA +A + A N
Sbjct: 63 KIKKQKGTGTARAGSAKNPLFKGGGRVFGPRPRSYSFKLNKTVKRLARRSAFSIKAQEAN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
IVVE+F FE P TK FI ++ GL+ K K+ F++ + ++NV SSRN+ +LT
Sbjct: 123 IIVVEDFV--FEAPNTKNFINVLKALGLEDK-KSLFVLGDSNKNVYLSSRNLKATNVLTN 179
Query: 233 RTLNLFDILDAETLVLTPSTVD 254
L+ + IL+A LVL +++
Sbjct: 180 SELSTYAILNANNLVLLEGSLE 201
>gi|449965904|ref|ZP_21812091.1| 50S ribosomal protein L4 [Streptococcus mutans 15VF2]
gi|449170725|gb|EMB73420.1| 50S ribosomal protein L4 [Streptococcus mutans 15VF2]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE LD + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGEVTLDDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE PKTKEF + +D K ++ E ++ E S+RN+ +K+ T T ++ D
Sbjct: 130 S--FEAPKTKEFATVLAALNVD--SKVLVILEEGNQAAELSARNLPNVKVATAATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++++ L++T +
Sbjct: 186 IVNSDKLLVTKEAI 199
>gi|358051335|ref|ZP_09145545.1| 50S ribosomal protein L4 [Staphylococcus simiae CCM 7213]
gi|357259155|gb|EHJ09002.1| 50S ribosomal protein L4 [Staphylococcus simiae CCM 7213]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKLDGTKSGSVELSDSVFAIEPNNSVLFEAITLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVKENSLTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ F+ PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FDAPKTKEFKNVLTT--LEQPKKVLVVTDNEDVNVELSARNIPNVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|197294630|ref|YP_001799171.1| 50S ribosomal protein L4 [Candidatus Phytoplasma australiense]
gi|226730703|sp|B1VAE7.1|RL4_PHYAS RecName: Full=50S ribosomal protein L4
gi|171853957|emb|CAM11920.1| 50S ribosomal protein L4 [Candidatus Phytoplasma australiense]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 114/192 (59%), Gaps = 12/192 (6%)
Query: 70 DLKSAAPDTARAVVHRALITDMQNKRR-----GTASTLTRGEVRGGGRKPYSQKKTGRAR 124
DLKS D H+ + D+ N +R GT +T TR V GGG+KP+ QK TGRAR
Sbjct: 18 DLKSNVFDIQP---HQQALYDVINAQRAAMRQGTHATKTRAFVSGGGKKPWRQKGTGRAR 74
Query: 125 RGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFE 184
GS R+PL GGGVVFGP PR++S+K+N+K LA+ +A++S I+V++F+ +
Sbjct: 75 HGSIRSPLWRGGGVVFGPSPRNYSVKVNQKVSHLALKSALSSHFRQNQLILVDDFN--LD 132
Query: 185 RPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAE 244
K+K+F + +++ L+ KA +V + N+ +SRN+ + + T +++ IL+ +
Sbjct: 133 THKSKDFQKTLQK--LNVTSKALIIVTNSNRNLTLASRNLPYVTLETAAHASVYQILNCK 190
Query: 245 TLVLTPSTVDFL 256
L+LT V +
Sbjct: 191 NLILTLDAVAYF 202
>gi|384438862|ref|YP_005653586.1| 50S ribosomal protein L4 [Thermus sp. CCB_US3_UF1]
gi|359289995|gb|AEV15512.1| 50S ribosomal protein L4 [Thermus sp. CCB_US3_UF1]
Length = 210
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDL-KSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS TG++ E DL + P VV + ++RRGTAST TRGEV R
Sbjct: 9 IPVLSPTGKR--ELAADLPQEVNPHLLWEVVR----WQLASRRRGTASTKTRGEVAYSSR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K Y QK TGRAR G P+ GGG VFGPKPRD++ + KK +R ++ A+A A
Sbjct: 63 KIYPQKHTGRARHGDIGAPIFVGGGTVFGPKPRDYAYTLPKKVRRAGLAMAVADRAREGK 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + T L++ SE V +++RN+ + L P
Sbjct: 123 LLLVEAFAGV--NGKTKEFLAWAKAAGLDGSE--TVLLVAESEAVRRAARNLPWVVTLAP 178
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DIL E LV+ + R G E
Sbjct: 179 EGLNVYDILRTERLVMDLKAWEAFQARVGGE 209
>gi|410459931|ref|ZP_11313620.1| 50S ribosomal protein L4 [Bacillus azotoformans LMG 9581]
gi|409928042|gb|EKN65166.1| 50S ribosomal protein L4 [Bacillus azotoformans LMG 9581]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G ++GE L + V+ A+I +R+GT R EV GGGRKP+ QK T
Sbjct: 11 GSQVGEIELSDAVFGIEPNNNVLFDAIIMQRATRRQGTHKVKNRSEVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI +A+++ + +V+E
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYSFKLPKKVRRLAIKSALSTKVLGNDVVVLENL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E PKTK+ ++ + L+ +K + + + +E S+RNI + ++ +N+ D+
Sbjct: 130 -TIEAPKTKDMVQVLNALSLN--KKVLIVTADADQTIELSARNIPGVTVVDANGVNVLDV 186
Query: 241 LDAETLVLT 249
++ + +V+T
Sbjct: 187 MNHDKMVIT 195
>gi|339445914|ref|YP_004711918.1| hypothetical protein EGYY_24480 [Eggerthella sp. YY7918]
gi|338905666|dbj|BAK45517.1| hypothetical protein EGYY_24480 [Eggerthella sp. YY7918]
Length = 207
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 106/168 (63%), Gaps = 4/168 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H + + R+GT T TRG+V GGG+KP+ QK TGRAR+G+ R P GGG VFG
Sbjct: 32 VMHTVVRSQRAAWRQGTHDTKTRGQVSGGGKKPWRQKGTGRARQGTIRAPQWAGGGTVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ ++NKKE +LA+ +A+++ A VVE F KFE+P+TK+ + A++ GL+
Sbjct: 92 PHPRSYAFRVNKKEVKLAMRSALSAKLADGELTVVENF--KFEKPRTKDAMTALKALGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
+ T ++ + N S RNI + ++ +N ++++D + LV+T
Sbjct: 150 --GRVTLVIGDEDVNTYLSFRNIPKVNIIPVSEINTYELIDNKNLVVT 195
>gi|163847924|ref|YP_001635968.1| 50S ribosomal protein L4 [Chloroflexus aurantiacus J-10-fl]
gi|222525804|ref|YP_002570275.1| 50S ribosomal protein L4 [Chloroflexus sp. Y-400-fl]
gi|163669213|gb|ABY35579.1| ribosomal protein L4/L1e [Chloroflexus aurantiacus J-10-fl]
gi|222449683|gb|ACM53949.1| ribosomal protein L4/L1e [Chloroflexus sp. Y-400-fl]
Length = 222
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 110/185 (59%), Gaps = 8/185 (4%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
AV+H+ ++ N R GT +T RGEV+G RK Y QK TGRAR+GS R P GGGV
Sbjct: 30 AVMHQYVVMQNANARLGTHNTRGRGEVKGSTRKLYRQKGTGRARQGSIRAPHHKGGGVAH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR + + + +K +RL + +A+++ AA+ V+E FERP+TK+FI ++ GL
Sbjct: 90 GPHPRSYRLAMPRKMRRLGVRSALSAKFAADQIRFVDELT--FERPRTKDFIAFLKAHGL 147
Query: 201 DPKQKATFLVME----VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K+ T +V++ +EN+ +S+ N+ +K L LN+ D+L + +V+ + V+ +
Sbjct: 148 ADKK--TLVVIDSKSPANENLRRSANNLPQVKTLLAHYLNVRDLLVYDHIVMPKAAVEVV 205
Query: 257 NGRYG 261
G
Sbjct: 206 ESYLG 210
>gi|418323019|ref|ZP_12934320.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
gi|365230673|gb|EHM71759.1| 50S ribosomal protein L4 [Staphylococcus pettenkoferi VCU012]
Length = 207
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G K G L+ A + V+ A+ + R+GT S R EVRGGGRKP+
Sbjct: 6 VVKVDGSKSGSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ V
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSYKVQENGFTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ F+ PKTKEF + L+ +K +V NVE S+RNI +++ T L
Sbjct: 126 VDAFN--FDAPKTKEFKNVLT--NLEQPKKVLVVVEGEDVNVELSARNIPGVQVTTAEGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI A+++++T
Sbjct: 182 NVLDISSADSVIIT 195
>gi|189095433|ref|YP_001936446.1| ribosomal protein L4 [Heterosigma akashiwo]
gi|157694776|gb|ABV66052.1| 50S ribosomal protein L4 [Heterosigma akashiwo]
gi|157778007|gb|ABV70193.1| 50S ribosomal protein L4 [Heterosigma akashiwo]
Length = 231
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 126/234 (53%), Gaps = 22/234 (9%)
Query: 45 IVSSQLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTR 104
++++QL PI+ K L L+ + ++HRA + R G A+T TR
Sbjct: 1 MITNQLL-KFPIIDGDSSKSESAKLKLR-VQNEKGNYLIHRAFVKQFIESRNGNANTKTR 58
Query: 105 GEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAI 164
EVRGGGRKP+ QK TGRAR GSNR+PL GGGV FGPK + + IK+NKKE RLA+ T +
Sbjct: 59 SEVRGGGRKPWQQKGTGRARAGSNRSPLWKGGGVTFGPKTKTYKIKLNKKEWRLALQTLL 118
Query: 165 ASAAAAENTI-VVEEFDGKFER---------PKTKEFIEAMRRW-------GLDPKQKAT 207
+ +N+I V++ F FER KTK + + ++ + + K
Sbjct: 119 FN---KKNSIRVIKSFSETFERISKEQGSNPQKTKTLLNFLNQFVKIRNLNSNNIRNKIL 175
Query: 208 FLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+V + S N+ +S+N+ + ++ LN+ +LD++ ++L ++ + YG
Sbjct: 176 IVVPKKSLNLISTSQNLKNIDIIAADNLNIKSLLDSKYILLCTESLKIIEETYG 229
>gi|241889133|ref|ZP_04776437.1| ribosomal protein, L4/L1 family [Gemella haemolysans ATCC 10379]
gi|241864382|gb|EER68760.1| ribosomal protein, L4/L1 family [Gemella haemolysans ATCC 10379]
Length = 207
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + G K+G + + + V+ +A+ + R+GT T R EV GGGRK
Sbjct: 4 LDLFKQDGTKVGAVEANEAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ +K +RLA+ +A++S AA
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAANEV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+E F+ KTK F E + L+ +K F+V E+ EN S RNI ++ +
Sbjct: 124 FALESLS--FDTIKTKNFKEMLSNLSLE--KKVLFVVTELEENTVLSGRNIPGVEFVETT 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN+ DIL + +V T V+
Sbjct: 180 GLNVLDILRSNKVVFTKDAVE 200
>gi|219685255|ref|ZP_03540075.1| 50S ribosomal protein L4 [Borrelia garinii Far04]
gi|219673351|gb|EED30370.1| 50S ribosomal protein L4 [Borrelia garinii Far04]
Length = 209
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA EN
Sbjct: 65 KQKGTGRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
VVE F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VVENFN--IESGKTKDLALIIKNFS-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFNK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S ++ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAINKLNEFY 207
>gi|149198923|ref|ZP_01875964.1| 50S ribosomal protein L4 [Lentisphaera araneosa HTCC2155]
gi|149137918|gb|EDM26330.1| 50S ribosomal protein L4 [Lentisphaera araneosa HTCC2155]
Length = 215
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 17/212 (8%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+ GE ++ K + VH +++ + + R G+A+T TR E RGGGRKP+ QK T
Sbjct: 11 GQASGELEINSKWLEFEKGEQAVHESVVAFLASLRSGSANTKTRSEKRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
G AR GS R+P+ GGGV FGPKPR ++ +NKK +RLA+ A+A AE IVV+ F
Sbjct: 71 GNARAGSTRSPIWTGGGVAFGPKPRSYAKNVNKKVRRLAVRRALAERIQAEELIVVDSF- 129
Query: 181 GKFERPKTK---EFIEAMRRWGLDPKQKATFLVMEVSENVE------KSSRNIGTLKMLT 231
FE+P TK F+E++ + L +++EN+E KS N+ + +T
Sbjct: 130 -AFEKPSTKTAIAFLESVN----AADRPVIILSDDLTENIENLENTAKSFNNVSLV--MT 182
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
+N +DIL + +++T + ++ + R E
Sbjct: 183 ASEVNAYDILSGKKVIITKAALEQVGQRISAE 214
>gi|395238078|ref|ZP_10416057.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|423351629|ref|ZP_17329260.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|237510710|gb|ACQ99342.1| ribosomal protein L4 [Turicella otitidis]
gi|394486514|emb|CCI84145.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
gi|404386349|gb|EJZ81512.1| 50S ribosomal protein L4 [Turicella otitidis ATCC 51513]
Length = 217
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 104/175 (59%), Gaps = 7/175 (4%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+ H+ ++ + R+GT ST TRGEVRGGG+KPY QK TGRAR+GS R P GGG+V G
Sbjct: 34 LTHQVVVAQLAAARQGTHSTKTRGEVRGGGKKPYRQKGTGRARQGSIRAPQFTGGGIVHG 93
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRW--G 199
PKPRD+S + KK KR A+ A+++ AA + VVEE P TK +A R +
Sbjct: 94 PKPRDYSQRTPKKMKRAALHGALSNRAANDRIHVVEEL-----VPGTKPSTKAARSFLER 148
Query: 200 LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
L ++ +V N +S+ N+ + +L P LN +D++ ++ +V + + ++
Sbjct: 149 LTGRKNVLLVVQAEDLNARRSANNLPDVHILVPSQLNTYDVIKSDDVVFSKAALE 203
>gi|399026815|ref|ZP_10728453.1| 50S ribosomal protein L4, bacterial/organelle [Flavobacterium sp.
CF136]
gi|398075579|gb|EJL66685.1| 50S ribosomal protein L4, bacterial/organelle [Flavobacterium sp.
CF136]
Length = 209
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 14/209 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
+ +L F G+ G K D+ A+ + A+ D++ N+R+GT R EV
Sbjct: 3 VKVLDFNGKDTGR-----KVQLSDSVFAIEPNNHAVYLDVKQYLANQRQGTHKAKERAEV 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK QK TG AR GS + PL GGG +FGP+PR +S K+NK KRLA +A +
Sbjct: 58 TGSTRKIKKQKGTGTARAGSIKNPLFKGGGTIFGPRPRSYSFKLNKGLKRLARKSAFSIK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A N IV+E+F FE P TK FI ++ GL+ K K+ F++ E ++NV SSRN+
Sbjct: 118 AKESNIIVLEDFG--FEAPNTKNFINVLKALGLENK-KSLFVLGESNKNVYLSSRNLKAS 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVDFL 256
++T L+ + IL+ LVL +++ +
Sbjct: 175 NVVTSSELSTYAILNTNNLVLLEGSLELI 203
>gi|436842983|ref|YP_007327361.1| ribosomal protein L4 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432171889|emb|CCO25262.1| ribosomal protein L4 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 206
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 5/178 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + + KR GT +T TRG RGGG KP+ QK TGRAR GS R+PL GGG FG
Sbjct: 32 ILHLVVRSQLAAKRSGTHATKTRGMKRGGGAKPWRQKGTGRARAGSTRSPLWRGGGTTFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+S K+NKK + LA+ A+ S + E +VV+ D KTK F + GL
Sbjct: 92 PQPRDYSFKVNKKVRALALKMALTSKLSEEKLMVVKSID--LPEIKTKLFADVAETLGL- 148
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
KA +V + + S+RNI +K+++ LN++DIL +V+ + L R
Sbjct: 149 --YKALIVVKDADNKLLLSARNIPGIKLISADQLNVYDILRHRQVVMLENAAQDLQER 204
>gi|315320565|ref|YP_004072622.1| 50S ribosomal protein L4 [Thalassiosira oceanica CCMP1005]
gi|283569038|gb|ADB27575.1| 50S ribosomal protein L4 [Thalassiosira oceanica CCMP1005]
Length = 214
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 119/194 (61%), Gaps = 12/194 (6%)
Query: 77 DTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGG 136
D+ ++HR ++ ++++GT ST TR EVRGGG+KP+ QK TGRAR GS+R+PL GG
Sbjct: 21 DSGNYLIHRDILRQQISQKQGTVSTKTRSEVRGGGKKPWQQKGTGRARAGSSRSPLWRGG 80
Query: 137 GVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV---VEEF--DGKFERPKTKEF 191
GV+FGPKPR +K+NKKE++LA+ T + + +N +V +EE + +F KTK+F
Sbjct: 81 GVIFGPKPRMTVLKLNKKERKLAVQTLLYN--KRKNILVSAKLEELGKELEFTDNKTKKF 138
Query: 192 IEAMRR-WGLDPKQKATFLVMEVSENVEKS----SRNIGTLKMLTPRTLNLFDILDAETL 246
++ +D + LV E S + K+ +RN+ +++++ LN +L AE +
Sbjct: 139 YSFCKKELNIDLNKTKLLLVSESSGSASKTFWLATRNLKNVEVISSANLNTLSLLKAERI 198
Query: 247 VLTPSTVDFLNGRY 260
++TP ++ + Y
Sbjct: 199 LITPIALNNIKEIY 212
>gi|229917357|ref|YP_002886003.1| 50S ribosomal protein L4 [Exiguobacterium sp. AT1b]
gi|259491559|sp|C4KZP5.1|RL4_EXISA RecName: Full=50S ribosomal protein L4
gi|229468786|gb|ACQ70558.1| ribosomal protein L4/L1e [Exiguobacterium sp. AT1b]
Length = 207
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ TG ++GE L + +V++ A++ ++R+GT T R EVRGGGRK
Sbjct: 4 VALLNQTGSQVGEIELAEAIFGIEPNESVLYDAIVMQQASRRQGTHDTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR +S K+ KK +RLA+ +A++S
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLALLSALSSKVQNNEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E F+ PKTK+ + L ++KA + + +E + ++RNI + ++
Sbjct: 124 IVLEGL--AFDAPKTKDMAAVLN--SLSVERKALVVTADYNETIALAARNIPGVTVIDAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D++ + ++ T V
Sbjct: 180 GVNVLDLVANDKVIFTKDAV 199
>gi|373499265|ref|ZP_09589756.1| 50S ribosomal protein L4 [Fusobacterium sp. 12_1B]
gi|404369324|ref|ZP_10974664.1| 50S ribosomal protein L4 [Fusobacterium ulcerans ATCC 49185]
gi|313690707|gb|EFS27542.1| 50S ribosomal protein L4 [Fusobacterium ulcerans ATCC 49185]
gi|371959336|gb|EHO77027.1| 50S ribosomal protein L4 [Fusobacterium sp. 12_1B]
Length = 210
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 9/200 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I TG + G + + +AV+H L ++ R+GTA+T TR VRGGGRK
Sbjct: 4 LNIYDLTGTQTGTVEVKDTVFGIEPNQAVLHEVLTAELAAARQGTAATKTRAMVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+G+ R P GGGV FGP PR + K+NKK + LA+ +A+ SA A
Sbjct: 64 PFKQKGTGRARQGTIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNLALRSAL-SAKVANGD 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKM 229
I+V DG + PKTK I ++ K F+V +++E N+ S RN+ +
Sbjct: 123 ILV--LDGTIDTPKTKTIIALTN--AVNATTKQLFVVNDLAEQADYNLYLSVRNLENAVV 178
Query: 230 LTPRTLNLFDILDAETLVLT 249
L P + ++ +L E ++LT
Sbjct: 179 LQPNEIGVYWLLKQEKVILT 198
>gi|163791667|ref|ZP_02186062.1| 50S ribosomal protein L4 [Carnobacterium sp. AT7]
gi|159873046|gb|EDP67155.1| 50S ribosomal protein L4 [Carnobacterium sp. AT7]
Length = 207
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + VV A+I + R+G S R VRGGGRKP++QK T
Sbjct: 11 GTQNGEVTLNDAIFGIEPNENVVFDAIIMQRASLRQGNHSVKNRSAVRGGGRKPWAQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI + +++ + + IVV+ +
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSTKVISGDLIVVDALN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + ++ +D K F+V+E + S+RN+ +K++ + + D
Sbjct: 131 --FDAPKTKEFAQVLKNLNVDSK---AFIVVENDNDFATLSARNLPGVKVVAFDNVTVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ E L+LT + +
Sbjct: 186 VVAHEKLILTQTAL 199
>gi|406874030|gb|EKD24070.1| hypothetical protein ACD_81C00118G0017 [uncultured bacterium]
Length = 209
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ IL++ EK G + A +VH+AL+T + N+R A R EVRGGG+K
Sbjct: 3 VDILNYKNEKAGTMEMPELMVATRWNPDLVHQALVTHLANRRDPWAHAKGRSEVRGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGP-KPRDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR GS R+PL GGGV GP K RD+S KINKK KR+A+ + ++ A N
Sbjct: 63 PWKQKGTGRARHGSIRSPLWKGGGVTHGPSKDRDFSKKINKKMKRVAVYSVLSKRFADNN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
VV+ F K KTKE+ +A+R + +D + K ++ + + ++ NI + L P
Sbjct: 123 VTVVDSF-AKVG-TKTKEWADALRNF-VDLRSKTVVILSTENRQLAQALGNIKNVDTLNP 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGV 262
++N++D++ + L++ + + Y +
Sbjct: 180 ASINVYDLMKYKNLIIEQGAIAEIEEHYKI 209
>gi|187918345|ref|YP_001883908.1| 50S ribosomal protein L4 [Borrelia hermsii DAH]
gi|119861193|gb|AAX16988.1| LSU ribosomal protein L1E [Borrelia hermsii DAH]
Length = 222
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ L+ + D + ++ A+ ++ N R GTAST TR EVRG +KP+
Sbjct: 18 VFSKDGQELRTIDLEDRVFNIDISYGSIYNAINNELANLRVGTASTKTRSEVRGSSKKPW 77
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S K+ +K KRLA + ++ A+AE+ +
Sbjct: 78 KQKGTGRARVGTKRNPIWVGGGIALGPKPRDYSYKLPRKVKRLAFRSVLSLCASAEDRLK 137
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
+VE F E KT+E M+ + + K L+ + V+++ RNI LK+L+
Sbjct: 138 IVENFT--IESGKTRELASIMKHF-VKINGKTVILLGNDDQMVKRAGRNIRDLKILSFNR 194
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 195 LRVVDLFYAKNLIALESAVNGLNELY 220
>gi|405983003|ref|ZP_11041314.1| 50S ribosomal protein L4 [Slackia piriformis YIT 12062]
gi|404389712|gb|EJZ84788.1| 50S ribosomal protein L4 [Slackia piriformis YIT 12062]
Length = 207
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + I +G+K+ E L+ + V+H + R+GT T TRGEVRGGG
Sbjct: 2 AKIEIKDASGKKVNEANLNAAVFGIEPNVHVMHTVVRAYRAAMRQGTHDTKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR+G+ R P GGG VFGP PR ++ ++N+KE +LA+ +A+++ A E
Sbjct: 62 KKPWRQKGTGRARQGTIRAPHWVGGGTVFGPHPRSYAFRVNRKEVKLAMRSALSAKLADE 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
IVV+ F+ FE+P TK+ A++ G D ++ T +V + N S RNI + ++
Sbjct: 122 QLIVVDGFN--FEKPSTKQAAAALKALGCD--RRTTIVVADDDVNTYLSFRNIERVNIIP 177
Query: 232 PRTLNLFDILDAETLVLTPSTVDFL 256
N +++D + LVLT + ++ L
Sbjct: 178 VSEANTMELVDNKVLVLTAAALERL 202
>gi|374598730|ref|ZP_09671732.1| LSU ribosomal protein L4P [Myroides odoratus DSM 2801]
gi|423323077|ref|ZP_17300919.1| 50S ribosomal protein L4 [Myroides odoratimimus CIP 103059]
gi|373910200|gb|EHQ42049.1| LSU ribosomal protein L4P [Myroides odoratus DSM 2801]
gi|404609809|gb|EKB09171.1| 50S ribosomal protein L4 [Myroides odoratimimus CIP 103059]
Length = 209
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT R E+ G RK QK TG AR GS ++P+ GGG VFGP+PR++S K
Sbjct: 41 LANQRQGTHKAKERAEISGSTRKIKKQKGTGTARAGSIKSPVFRGGGRVFGPRPRNYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A + EN IV+E F+ FE P TK FI ++ GL+ K K+ F++
Sbjct: 101 LNKNLKRLARKSAFSIKVREENLIVLENFN--FEAPSTKNFISVLKALGLENK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
E ++NV SSRN+ ++T L+ + IL+A +LVLT +V
Sbjct: 158 GESNKNVYLSSRNLEKAAVVTNSELSTYAILNAGSLVLTEGSV 200
>gi|399926561|ref|ZP_10783919.1| 50S ribosomal protein L4 [Myroides injenensis M09-0166]
Length = 209
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT R E+ G RK QK TG AR GS ++P+ GGG VFGP+PR++S K
Sbjct: 41 LANQRQGTHKAKERAEISGSTRKIKKQKGTGTARAGSIKSPVFRGGGRVFGPRPRNYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A + A N IVVE F+ FE P TKEFI+ + GL+ K K+ F++
Sbjct: 101 LNKSLKRLARKSAFSIKAKESNLIVVENFN--FETPSTKEFIKVLSALGLENK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
E + NV SSRN+ ++ L+ + IL+A +LVLT +V
Sbjct: 158 GESNNNVYLSSRNLEKSSVVNNSELSTYAILNAGSLVLTEGSV 200
>gi|172056141|ref|YP_001812601.1| 50S ribosomal protein L4 [Exiguobacterium sibiricum 255-15]
gi|407475994|ref|YP_006789871.1| 50S ribosomal protein L4 [Exiguobacterium antarcticum B7]
gi|226730665|sp|B1YGV1.1|RL4_EXIS2 RecName: Full=50S ribosomal protein L4
gi|171988662|gb|ACB59584.1| ribosomal protein L4/L1e [Exiguobacterium sibiricum 255-15]
gi|407060073|gb|AFS69263.1| 50S ribosomal protein L4 [Exiguobacterium antarcticum B7]
Length = 207
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ TG ++G+ L + AVV+ A++ ++R+GT T R EVRGGGRK
Sbjct: 4 VALLNQTGTQVGDIELADAVFGIEPNEAVVYDAIVMQQASRRQGTHDTKGRSEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ K+ KK +RLA+ +A++S A
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGTVFGPTPRSYAYKLPKKVRRLALRSALSSKVANNEF 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+E + PKTK+ I L ++K + + +E V S+RNI + ++
Sbjct: 124 IVLEGL--TIDAPKTKDMISVFA--ALSIERKVLVVTADYNETVVLSTRNIPGVTVVDAA 179
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N+ D++ + ++ T V
Sbjct: 180 GVNVLDLVAHDKVIFTKDAV 199
>gi|329768274|ref|ZP_08259775.1| 50S ribosomal protein L4 [Gemella haemolysans M341]
gi|328837473|gb|EGF87102.1| 50S ribosomal protein L4 [Gemella haemolysans M341]
Length = 207
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + G K+G + + V+ +A+ + R+GT T R EV GGGRK
Sbjct: 4 LDLFKQDGTKVGAVEASEAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ +K +RLA+ +A++S AA
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAANEV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+E F+ KTK F E + L+ +K F+V E+ EN S RNI ++ +
Sbjct: 124 FALESLS--FDTIKTKNFKEMLSNLSLE--KKVLFVVTELEENTVLSGRNIPGVEFVETT 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN+ DIL + +V T V+
Sbjct: 180 GLNVLDILGSNKVVFTKDAVE 200
>gi|206602676|gb|EDZ39157.1| Ribosomal protein L4 [Leptospirillum sp. Group II '5-way CG']
Length = 218
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + R GTAST TRGEV GGG+KPY QK TGRAR+GS R P GG ++FG
Sbjct: 32 LLHEIIQMQRAGIRSGTASTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQWRGGAIIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+ + K+ LA+ AI S ++ +V+ D KTK+ I +W L
Sbjct: 92 PRPRDYFYRQPAKKIVLAVKNAIFSHLENKSLYLVDSLD--IPSRKTKDLIALFNKWSLF 149
Query: 202 PKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
P ++ ++ +SEN+ S RNI L++L P +N +D+L A+ ++++ + +N
Sbjct: 150 PGEERILIIDNGLSENIYYSCRNIPGLEILLPHQVNPYDLLIADKVLVSKEAFENMN 206
>gi|320451299|ref|YP_004203395.1| 50S ribosomal protein L4 [Thermus scotoductus SA-01]
gi|320151468|gb|ADW22846.1| 50S ribosomal protein L4/L1 family [Thermus scotoductus SA-01]
Length = 205
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDL-KSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G++ E DL + P VV + +RRGTAST TRGEV R
Sbjct: 4 IPVLSSSGKR--ELAADLPQEVNPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSSR 57
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K Y QK TGRAR G P+ GGG VFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 58 KIYPQKHTGRARHGDIGAPIFVGGGTVFGPKPRDYSYTLPKKVRQAGLAMAVADRAKEGK 117
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE+F G KTKEF+ + GLD + + L++ SE V +++RN+ + L P
Sbjct: 118 LLLVEDFAGV--NGKTKEFLAWAKGAGLDGSE--SVLLVTASELVRRAARNLPWVVTLAP 173
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DIL E LV+ + + R G E
Sbjct: 174 EGLNVYDILRTERLVMDLAAWEAFQARMGGE 204
>gi|78186071|ref|YP_374114.1| 50S ribosomal protein L4 [Chlorobium luteolum DSM 273]
gi|109893616|sp|Q3B6G0.1|RL4_PELLD RecName: Full=50S ribosomal protein L4
gi|78165973|gb|ABB23071.1| LSU ribosomal protein L4P [Chlorobium luteolum DSM 273]
Length = 208
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ NKR+GT + TR EVRGGGRKPY QK TG AR+GS R+PL GGG +FGP P + K
Sbjct: 41 LANKRQGTHKSKTRAEVRGGGRKPYRQKGTGNARQGSTRSPLMIGGGTIFGPTPHGYDQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+N+K K+LA +A ++ A ++VE+F KTK + +R GLD K K L
Sbjct: 101 VNRKVKQLARRSAFSAKAQEGRILIVEDF--ALAEIKTKPVADMLRNLGLDAK-KILMLT 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ + + +S RNI L ++T + +DIL++ T++ + + L
Sbjct: 158 PDYNMVIARSGRNIEALNIMTAEKASTYDILNSHTVLFQKTALKKL 203
>gi|433450235|ref|ZP_20412583.1| 50S ribosomal protein L4 [Mycoplasma sp. G5847]
gi|431933935|gb|ELK20490.1| 50S ribosomal protein L4 [Mycoplasma sp. G5847]
Length = 208
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G ++ E L+ + + ++ +++ R+GT TR EV GGGRK
Sbjct: 3 LQVLDIKGNEVKEIALNDYVWGIEPHQQAIYDTVVSQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGV FGP P ++ +NKK + LA + ++ N
Sbjct: 63 PWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDVNYKKSVNKKVRALAFRSVLSLKVKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++F+ F +P TKE + M+ +D QK + E E V KS+ NI +K ++
Sbjct: 123 LVIVDKFE--FAKPSTKEMVVVMKNLKIDD-QKTLIVTKEKEELVVKSANNITGVKTIST 179
Query: 233 RTLNLFDILDAETLVLT 249
LN+FD+L+A L++T
Sbjct: 180 NQLNVFDLLNATKLLIT 196
>gi|374814303|ref|ZP_09718040.1| 50S ribosomal protein L4 [Treponema primitia ZAS-1]
Length = 216
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++ A+ ++ NKR GTAST RGEV G KPY QK TGRARRG ++P+ GGG+VFG
Sbjct: 31 LIWYAINNELANKRLGTASTKDRGEVHGSNAKPYKQKGTGRARRGDKKSPIMVGGGIVFG 90
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+S I KK KRLA+ T ++ A ++ VVE+F E KTKE ++ +G
Sbjct: 91 PRPRDFSYTIPKKAKRLALKTILSLKAQSDTLKVVEDFS--IESGKTKELASLLKNFG-- 146
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
KQ+ ++ + ++K+ NI L L+ L DI ++L + L+ Y
Sbjct: 147 DKQRTVIILKDDDAKIKKAGANIPWLSFLSYNRLRAHDIFYGRRVILLETAAKSLSAFY 205
>gi|386853883|ref|YP_006203168.1| 50S ribosomal protein L4 [Borrelia garinii BgVir]
gi|365193917|gb|AEW68815.1| RplD [Borrelia garinii BgVir]
Length = 209
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+ QK T
Sbjct: 10 GKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPWKQKGT 69
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI-VVEEF 179
GRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA EN VVE F
Sbjct: 70 GRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADENNFKVVENF 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ E KTK+ ++ + K L+ + ++++ +NI LK+L+ L + D
Sbjct: 130 N--IESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFNKLRVVD 186
Query: 240 ILDAETLVLTPSTVDFLNGRY 260
+ A+ L+ S V+ LN Y
Sbjct: 187 LFYAKNLIALESAVNKLNEFY 207
>gi|304438906|ref|ZP_07398829.1| ribosomal protein L4/L1 family protein [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304372572|gb|EFM26155.1| ribosomal protein L4/L1 family protein [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 229
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 4/174 (2%)
Query: 80 RAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVV 139
R V+ + + NKR+GT + TR EVRGGGRKP+ QK TGRAR+GS R+P GG+V
Sbjct: 52 RHAVYLVVKNQLANKRQGTHACKTRAEVRGGGRKPWRQKGTGRARQGSIRSPQWRKGGIV 111
Query: 140 FGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWG 199
F KPRD+S KK +RLA+ + + S IV++ D K + KTK+F + G
Sbjct: 112 FAKKPRDYSYTTPKKVRRLALKSVLTSKVNLNEIIVID--DIKMDNIKTKDFKNFLNAVG 169
Query: 200 LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ K+ A + E NV S+RNI +K R +N++D+L E LV++ + +
Sbjct: 170 V--KKSAYVVTAEHDRNVNLSARNIAGVKASEARLINVYDLLKHENLVISKAAL 221
>gi|365961244|ref|YP_004942811.1| 50S ribosomal protein L4 [Flavobacterium columnare ATCC 49512]
gi|365737925|gb|AEW87018.1| 50S ribosomal protein L4 [Flavobacterium columnare ATCC 49512]
Length = 209
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 84 HRALITDMQ----NKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVV 139
+ AL D++ N+R+GT + R EV G RK QK TG AR GS ++PL GGG V
Sbjct: 30 NHALYLDVKQYLANQRQGTHKSKERAEVAGSTRKIKKQKGTGTARAGSKKSPLFKGGGTV 89
Query: 140 FGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWG 199
FGP+PR++S K+NK KRLA +A+ A N IV+E+F FE P TK FI ++ G
Sbjct: 90 FGPRPRNYSFKLNKALKRLARKSALTLKAKESNLIVLEDFG--FEAPSTKNFINVLKALG 147
Query: 200 LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
L+ K K+ F++ ++NV SSRN+ ++T L+ + IL+A LVL +++
Sbjct: 148 LENK-KSLFVLGGDNKNVYLSSRNLQKSSVITNSELSTYAILNANNLVLLEGSLE 201
>gi|300088196|ref|YP_003758718.1| 50S ribosomal protein L4 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527929|gb|ADJ26397.1| ribosomal protein L4/L1e [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 210
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 4/204 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + +G+ + + + A AVVH+A++ N R+GT+ST TR EV G +K
Sbjct: 3 IPVYNTSGQVVRNVTVSDELFAVPMNDAVVHQAMVAQAANARQGTSSTRTRSEVSGTTQK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
+ QK TG AR GS ++ LRPGGGV+FGPKPRD+S + KK +RLAI ++ A+ +
Sbjct: 63 MFRQKGTGEARAGSRKSGLRPGGGVIFGPKPRDYSKSLPKKMRRLAIRCLLSDKVASGSL 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
VV+ + PKT+E + + L+ A V ENV S+RN+ +K
Sbjct: 123 KVVDAL--ALDAPKTREMTQVLT--ALEIGSSAIIATAGVDENVVLSARNLPRVKTTPAN 178
Query: 234 TLNLFDILDAETLVLTPSTVDFLN 257
+N+ D+L +TL+LT ++ +
Sbjct: 179 LINVGDLLKYDTLLLTEQALEVVQ 202
>gi|228472296|ref|ZP_04057062.1| ribosomal protein, L4/L1 family [Capnocytophaga gingivalis ATCC
33624]
gi|228276499|gb|EEK15223.1| ribosomal protein, L4/L1 family [Capnocytophaga gingivalis ATCC
33624]
Length = 209
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 106/166 (63%), Gaps = 3/166 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R EV G RK QK TG AR GS ++P+ GGG +FGP+P+D++ K
Sbjct: 41 LANQRQGTHKSKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK KRLA + ++ A IV+E+F E PKTK+F + + G+ K K+ F++
Sbjct: 101 LNKKVKRLARRSILSQKAQQGAIIVLEDFS--LETPKTKDFTKILAALGIQDK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ ++NV SSRNI ++ +T LN +DI +A+T+VL S+V+ +
Sbjct: 158 ADTNKNVYLSSRNIPSVNTVTASELNTYDIANAKTVVLLESSVEVI 203
>gi|257866530|ref|ZP_05646183.1| ribosomal protein L4 [Enterococcus casseliflavus EC30]
gi|257872955|ref|ZP_05652608.1| ribosomal protein L4 [Enterococcus casseliflavus EC10]
gi|257876134|ref|ZP_05655787.1| ribosomal protein L4 [Enterococcus casseliflavus EC20]
gi|325567375|ref|ZP_08144042.1| 50S ribosomal protein L4 [Enterococcus casseliflavus ATCC 12755]
gi|420261549|ref|ZP_14764193.1| ribosomal protein L4 [Enterococcus sp. C1]
gi|257800488|gb|EEV29516.1| ribosomal protein L4 [Enterococcus casseliflavus EC30]
gi|257807119|gb|EEV35941.1| ribosomal protein L4 [Enterococcus casseliflavus EC10]
gi|257810300|gb|EEV39120.1| ribosomal protein L4 [Enterococcus casseliflavus EC20]
gi|325158808|gb|EGC70954.1| 50S ribosomal protein L4 [Enterococcus casseliflavus ATCC 12755]
gi|394771483|gb|EJF51244.1| ribosomal protein L4 [Enterococcus sp. C1]
Length = 207
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 8/195 (4%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A+ N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVASNNLVAVEGLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSEN--VEKSSRNIGTLKMLTPRTLNLF 238
F+ PKTKEF + + +D K LV+ SEN S+RN+ + ++T +++
Sbjct: 131 --FDAPKTKEFKQVLANLTIDSK----VLVVLESENDFAALSARNLPKVSVVTADNISVL 184
Query: 239 DILDAETLVLTPSTV 253
DI+ + +++T + +
Sbjct: 185 DIVSNDKMLVTQTAL 199
>gi|189501210|ref|YP_001960680.1| 50S ribosomal protein L4 [Chlorobium phaeobacteroides BS1]
gi|226730638|sp|B3EP60.1|RL4_CHLPB RecName: Full=50S ribosomal protein L4
gi|189496651|gb|ACE05199.1| ribosomal protein L4/L1e [Chlorobium phaeobacteroides BS1]
Length = 208
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 123/196 (62%), Gaps = 4/196 (2%)
Query: 54 LPILSFTGEKIGETY-LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ G + GE L+ + + + ++ + + M N+R+GT R EVRGGGR
Sbjct: 3 LKVLNTGGSETGEVVTLNDAVFSAEVSEHAMYLDVKSIMANRRQGTHKAKNRSEVRGGGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KPY QK TG AR+GS R+PL GGG +FGP+PRD+ +K+NKK K+LA +A+ + A
Sbjct: 63 KPYRQKGTGHARQGSTRSPLMTGGGTIFGPEPRDYGLKVNKKVKKLARRSALTNKANEGG 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+VVE+F F++ KT++ E ++ GLD + K L+ E ++ + +S RNI L+++
Sbjct: 123 IVVVEDF--VFDQIKTRQMAEVLKNLGLDSR-KTLMLMPEHNDIIVRSGRNIPKLQVVVA 179
Query: 233 RTLNLFDILDAETLVL 248
+ +DILD++T+++
Sbjct: 180 DNASTYDILDSQTVLV 195
>gi|160914558|ref|ZP_02076773.1| hypothetical protein EUBDOL_00564 [Eubacterium dolichum DSM 3991]
gi|158433716|gb|EDP12005.1| 50S ribosomal protein L4 [Eubacterium dolichum DSM 3991]
Length = 209
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +LS G+++ E L + + + A++ + R+GT T R EV GGGRK
Sbjct: 4 MVVLSQNGKELKEITLADSVFGIEPNQQCIFDAIVMQRASVRQGTHDTKNRTEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R GGG+VFGP PR +S K+NKK +RLA+ + ++
Sbjct: 64 PWRQKGTGRARQGSIRATQWRGGGIVFGPTPRSYSYKLNKKVRRLALKSVLSEKVLENAM 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS--ENVEKSSRNIGTLKMLT 231
VV++F+ PKTK F + + ++ +K F+V E EN S RNI T+ MLT
Sbjct: 124 SVVDKFE--LAEPKTKAFNQIIA--DINAPKKTLFVVSENEDFENAFLSMRNIPTMMMLT 179
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
+N++DI++A +V T + V
Sbjct: 180 ADGINVYDIVNANKIVFTEAAV 201
>gi|408671096|ref|YP_006871167.1| 50S ribosomal protein L4 [Borrelia garinii NMJW1]
gi|407240918|gb|AFT83801.1| 50S ribosomal protein L4 [Borrelia garinii NMJW1]
Length = 209
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA EN
Sbjct: 65 KQKGTGRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFN--IESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFNK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVKKLNEFY 207
>gi|300812351|ref|ZP_07092786.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496656|gb|EFK31743.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 205
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 6/198 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G GE L+ + + AVV A+I KR+GT+ R VRGGG+KP+
Sbjct: 6 LMDQNGNNAGEVTLNDNVFSVEPNEAVVFDAIIRQRAGKRQGTSKVKNRSAVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGGVVFGP PR ++ + +K++RLAI + ++ +N +V
Sbjct: 66 RQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLLDQNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ + PKTK+FI + L+ K LV+ +NV+ S++N+ +K++ L
Sbjct: 126 LDKL--TLDAPKTKDFIAILNGLKLEGK----VLVVSDDKNVQLSAKNLPKVKVVPVNGL 179
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D ++ + LVLT V
Sbjct: 180 NVEDAVNYDKLVLTQDDV 197
>gi|224534698|ref|ZP_03675270.1| 50S ribosomal protein L4 [Borrelia spielmanii A14S]
gi|224513946|gb|EEF84268.1| 50S ribosomal protein L4 [Borrelia spielmanii A14S]
Length = 209
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ +++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTVNLDDRVFNIEVSHGSIYNAIKSELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA E++
Sbjct: 65 KQKGTGRARVGTKRNPVWVGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADESSFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
VVE F+ E KTK+ ++ + + K L+ + ++++ +NI LK+L+
Sbjct: 125 VVENFN--IESGKTKDLALIIKNF-VSFNGKVVVLLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|223936427|ref|ZP_03628339.1| ribosomal protein L4/L1e [bacterium Ellin514]
gi|223894945|gb|EEF61394.1| ribosomal protein L4/L1e [bacterium Ellin514]
Length = 208
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 8/212 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARA--VVHRALITDMQNKRRGTASTLTRGEVRGGG 111
L I G GE +D+K + R VH A++ +R GTA T GEV G
Sbjct: 3 LKIQDIKGNSQGE--MDVKFSLVTNGRGTQAVHDAVVAYRAAQRSGTACAKTVGEVAGSN 60
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TGRAR GS R+PL GGGVVFGP+PRD+S KI++ K+LA A+ A
Sbjct: 61 KKPWKQKGTGRARAGSVRSPLWRGGGVVFGPRPRDFSKKISRSTKQLAFRKALTERLNAG 120
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+ +VV+ F K KTKEF+ + L + A + + N+ ++SRN+ +++ T
Sbjct: 121 DVLVVDNF--KLASAKTKEFVGVLT--ALKVEGTALVVADALDANLSRASRNVAKVEVAT 176
Query: 232 PRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
++N + IL ++ LV T S + + R G E
Sbjct: 177 SDSVNTYQILRSDKLVFTRSAFEKVEERLGKE 208
>gi|403743621|ref|ZP_10953173.1| 50S ribosomal protein L4/L1e [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122651|gb|EJY56856.1| 50S ribosomal protein L4/L1e [Alicyclobacillus hesperidum
URH17-3-68]
Length = 206
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L+ G+++ E L K ++H+ ++ + +R GT R V GGGRK
Sbjct: 4 VAVLNTAGQQVSELQLSDKIFGAPVRLDLMHQVVLQYLAARRAGTHKVKNRAAVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGVVFGP PR ++ + KK +RLA+ +A++S A
Sbjct: 64 PWRQKGTGRARQGSIRAPQWKGGGVVFGPTPRSYAFSVPKKVRRLALYSALSSKVAEGKI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ + +PKTKE + ++ + KA + E E + +SSRNI +K +
Sbjct: 124 IVLDDL--QLNQPKTKEMVSVLKNLNVG---KALIVDGEKKEPLYRSSRNIPGVKYMDAA 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
+N++++L + LVLT V
Sbjct: 179 GINVYELLRHDHLVLTKDAV 198
>gi|402831963|ref|ZP_10880633.1| 50S ribosomal protein L4 [Capnocytophaga sp. CM59]
gi|402280396|gb|EJU29107.1| 50S ribosomal protein L4 [Capnocytophaga sp. CM59]
Length = 209
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ NKR+GT + R EV G RK QK TG AR GS ++P+ GGG +FGP+P+D++ K
Sbjct: 41 LANKRQGTHKSKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK KRLA + ++ A IVVE+F+ + PKTK+F + + G+ K K+ F++
Sbjct: 101 LNKKVKRLARRSILSQKAQQGAIIVVEDFN--LQAPKTKDFTQILAALGIQDK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ ++NV SSRNI T+ +T LN +DI +A ++VL V+ +
Sbjct: 158 TDTNKNVYLSSRNIPTVNTVTASELNTYDIANATSVVLLEGAVEVI 203
>gi|354807351|ref|ZP_09040821.1| 50S ribosomal protein L4 [Lactobacillus curvatus CRL 705]
gi|354514155|gb|EHE86132.1| 50S ribosomal protein L4 [Lactobacillus curvatus CRL 705]
Length = 207
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + G L+ A + VV A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGNVELNDSIWAIEPNENVVFDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG VFGP PR +S K+ +K +RLAI + ++ + +VV+ F+
Sbjct: 71 GRARQGSIRSPQWRGGGTVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVIDNDLVVVDAFN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTKEF E + + LD KA ++ + ++ S+RN+ + ++ +N+ D+
Sbjct: 131 --FDAPKTKEFAEVLNK--LDVNTKALVVLEDGNDFAALSARNLPNVTVVAADGINVLDV 186
Query: 241 LDAETLVLTPSTV 253
+ + L+LT + +
Sbjct: 187 VGNQKLILTQAAL 199
>gi|70725804|ref|YP_252718.1| 50S ribosomal protein L4 [Staphylococcus haemolyticus JCSC1435]
gi|82581594|sp|Q4L8B3.1|RL4_STAHJ RecName: Full=50S ribosomal protein L4
gi|68446528|dbj|BAE04112.1| 50S ribosomal protein L4 [Staphylococcus haemolyticus JCSC1435]
Length = 207
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 8/198 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ N +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVKENNFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
V+ F FE PKTKEF + +Q LV+ SE NVE S+RNI +++ T +
Sbjct: 126 VDNFG--FEAPKTKEFKNVLTTL----EQPKKVLVVTDSEDVNVELSARNIPGVQVSTAQ 179
Query: 234 TLNLFDILDAETLVLTPS 251
LN+ DI A+++++T S
Sbjct: 180 GLNVLDITSADSVIITES 197
>gi|328958727|ref|YP_004376113.1| 50S ribosomal protein L4 [Carnobacterium sp. 17-4]
gi|328675051|gb|AEB31097.1| 50S ribosomal protein L4 [Carnobacterium sp. 17-4]
Length = 207
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + VV A+I + R+G S R VRGGGRKP++QK T
Sbjct: 11 GTQNGEVTLNDAIFGIEPNENVVFDAIIMQRASLRQGNHSVKNRSAVRGGGRKPWAQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI + +++ + + IVV+ +
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSVLSTKVVSGDLIVVDALN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + ++ +D K F+V+E + S+RN+ +K++ + + D
Sbjct: 131 --FDAPKTKEFAQVLKNLNVDSK---AFIVVENDNDFATLSARNLPGVKVVAFDNVTVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ E L+ T + +
Sbjct: 186 VVAHEKLIFTQTAL 199
>gi|452972597|gb|EME72426.1| 50S ribosomal protein L4 [Bacillus sonorensis L12]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G GE L+ + +VV A++ + R+GT R EV GGGRKP+ QK T
Sbjct: 11 GSTAGEIELNDSVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR ++ K+ KK +RLAI +A++S N IV+E+
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSALSSKVNDNNLIVLEDLT 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
+ KTKE ++ GL ++KA + + +E V S+RN+ + ++ +N+ D+
Sbjct: 131 --LDAVKTKEMAAVLK--GLSIEKKALIVTADSNETVALSARNLPGVTVVEANGINVLDV 186
Query: 241 LDAETLVLTPSTVD 254
+ E LV+T + V+
Sbjct: 187 VGHEKLVMTKAAVE 200
>gi|338730532|ref|YP_004659924.1| 50S ribosomal protein L4P [Thermotoga thermarum DSM 5069]
gi|335364883|gb|AEH50828.1| LSU ribosomal protein L4P [Thermotoga thermarum DSM 5069]
Length = 226
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 123/217 (56%), Gaps = 19/217 (8%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G+KIG + + D V+ R + + +R GTAST TRGEV GGGRK
Sbjct: 4 IDLYNVKGQKIGTREISDEVFNIDPNYDVMWRYVDYQLSLRRAGTASTKTRGEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR GS R+P+ GGV GPKPRDWS K+ KK K+LA+ +A++ N
Sbjct: 64 PWPQKHTGRARHGSIRSPIWRHGGVAHGPKPRDWSKKLPKKMKKLALRSALSQRFREGNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV--SENVEKSSRNIGTLKMLT 231
IVV++ K E+P TKE I ++ GLD ++ L + ENV+ S+RN+ T+K++
Sbjct: 124 IVVDDI--KLEKPSTKEMIGILKNLGLDGQKVLIVLPWKNPEYENVKLSARNLETVKVII 181
Query: 232 PRT---------------LNLFDILDAETLVLTPSTV 253
LN++DI++ + LVL TV
Sbjct: 182 ADNPGARREDERAIRIDGLNVYDIMNHDKLVLAWDTV 218
>gi|112791755|gb|ABI22153.1| ribosomal protein L4 [Flavobacterium hibernum]
Length = 209
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 14/209 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
+ +L F G+ G K D+ A+ + A+ D++ N+R+GT R EV
Sbjct: 3 VKVLDFNGKDTGR-----KVQLSDSVFAIEPNNHAVYLDVKQYLANQRQGTHKAKERAEV 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK QK TG AR GS + PL GGG +FGP+ R +S K+NK KRLA +A +
Sbjct: 58 TGSTRKIKKQKGTGTARAGSIKNPLFKGGGTIFGPRQRSYSFKLNKSLKRLARKSAFSIK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A N IV+E+F+ FE P TK FI ++ GL+ K K+ F++ E ++NV SSRN+
Sbjct: 118 AKESNIIVLEDFN--FEAPNTKNFINVLKALGLENK-KSLFVLGESNKNVYLSSRNLKAS 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVDFL 256
++T L+ + IL+ LVL +++ +
Sbjct: 175 NVVTSSELSTYAILNTNNLVLLEGSLELI 203
>gi|256847764|ref|ZP_05553209.1| ribosomal protein L4/L1 [Lactobacillus coleohominis 101-4-CHN]
gi|256715453|gb|EEU30429.1| ribosomal protein L4/L1 [Lactobacillus coleohominis 101-4-CHN]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
Query: 84 HRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPK 143
+ ++I + R+GT + R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFGP
Sbjct: 34 YESIIRQRASLRQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQFRGGGIVFGPT 93
Query: 144 PRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPK 203
PR ++ ++ +K ++LAI +A++ A + +VV+ + F+ PKTKEF + L
Sbjct: 94 PRSYNYRLPRKVRQLAIKSALSQKVADDKFVVVDSIN--FDAPKTKEFASVLD--NLKVN 149
Query: 204 QKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+K +V + +N S+RN+ + ++TP +N+ +++DA+ +V+T S +
Sbjct: 150 EKVLIVVTDDDKNAGLSARNLSKVNVVTPAGVNILNVVDAQKIVITKSAL 199
>gi|418315622|ref|ZP_12927079.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21340]
gi|365243062|gb|EHM83753.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21340]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ A V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLST--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQAL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|410447250|ref|ZP_11301348.1| 50S ribosomal protein L4 [SAR86 cluster bacterium SAR86E]
gi|409979815|gb|EKO36571.1| 50S ribosomal protein L4 [SAR86 cluster bacterium SAR86E]
Length = 203
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VH+A++T + R+GT TR EVRGGG+KPY QK TGRAR G+ R+P+ GGGV F
Sbjct: 30 LVHQAVVTYLAGSRQGTHKQKTRSEVRGGGKKPYRQKGTGRARAGTIRSPIWRGGGVAFA 89
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PRD+S KINKK R AIS+ + + +E+ KFE PKTKE ++++ L+
Sbjct: 90 ATPRDYSKKINKKMYRAAISSIFSELHRQNRLVAIEQ--PKFEAPKTKEMNSFLQQFDLN 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
++ E+ N+ S+RNI + ++T + +N +L +E + +TP+ +
Sbjct: 148 ---NVLIILDEMDTNLYLSARNIPHVDVVTVKEINPVILLRSEKVAVTPAAFKLI 199
>gi|239618264|ref|YP_002941586.1| 50S ribosomal protein L4 [Kosmotoga olearia TBF 19.5.1]
gi|259491563|sp|C5CGR3.1|RL4_KOSOT RecName: Full=50S ribosomal protein L4
gi|239507095|gb|ACR80582.1| ribosomal protein L4/L1e [Kosmotoga olearia TBF 19.5.1]
Length = 226
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 19/215 (8%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L+ TG KIG L + V+ R + + N+R GTA TR EV GGGRKP+
Sbjct: 6 VLNVTGNKIGTVELKDSIFNIEPNYDVMFRYVDMQLANRRAGTAKAKTRSEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR GS R PL GGV+ GPKP+DWS K+NKK K+LA+ +A++ N +V
Sbjct: 66 PQKHTGRARTGSIRNPLWRHGGVIHGPKPKDWSKKLNKKMKKLALKSALSLRFKEGNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV---MEVSENVEKSSRNIGTLKMLTP 232
V++ K +RPKTK+ E ++ GL +K F++ + ENV+ S RNI +K++
Sbjct: 126 VDDI--KLDRPKTKQMREIVKNLGLSDAKKVLFILPWKRDEYENVKLSGRNIPGVKVIIA 183
Query: 233 RT--------------LNLFDILDAETLVLTPSTV 253
LN+FDIL+ E +V T V
Sbjct: 184 DNPGNLVNGRSSNIDGLNVFDILNHEKIVFTVDLV 218
>gi|421186876|ref|ZP_15644257.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB418]
gi|399965126|gb|EJN99752.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB418]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L A + AVV A++ + R+GT S R V GGGRKP+ QK T
Sbjct: 11 GTQAGEVELADSIFAIEPNEAVVTDAVLMQRASLRQGTHSVKNRSTVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
G AR+GS R P GG + GP PR ++ KIN+K RLA+ + ++ +A+N ++++E +
Sbjct: 71 GNARQGSIRAPQWRGGAISMGPIPRSYAYKINRKAYRLALKSVLSDKVSAKNFVIIDELN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE+P TK +++ + L+ +K +V + +EN + S+RN+ +++ T +N++D+
Sbjct: 131 --FEKPSTKAIADSLNK--LEATKKTLLVVDDANENAKLSARNLPNVQVTTASGVNVYDL 186
Query: 241 LDAETLVLTPSTV 253
+ A+ +V+ S V
Sbjct: 187 VKAQKVVIVQSAV 199
>gi|18311386|ref|NP_563320.1| 50S ribosomal protein L4 [Clostridium perfringens str. 13]
gi|18146070|dbj|BAB82110.1| 50S ribosomal protein L4 [Clostridium perfringens str. 13]
Length = 175
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G+++G+ L+ + + + +H+ ++ + NKR+GT S TR EVRGGG KP+ QK T
Sbjct: 11 GQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R P GGVVF PKPRD+ + I K +++A+++A+ S A + +V+E+
Sbjct: 71 GRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVA--DMVVLEDLT 128
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNI 224
FE PKTKE ++ + + +K + EV+ENV KS+RNI
Sbjct: 129 --FEAPKTKEAVKMLNAF---EAKKTLIITAEVNENVYKSARNI 167
>gi|375090142|ref|ZP_09736460.1| 50S ribosomal protein L4 [Facklamia languida CCUG 37842]
gi|374565833|gb|EHR37092.1| 50S ribosomal protein L4 [Facklamia languida CCUG 37842]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G GE L+ + AV+ A++ + R+GT + R V GGGRKP+ QK T
Sbjct: 11 GSHAGEVELNEAVFGVEPNEAVIFDAVVMQRASMRQGTHAVRNRSAVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ +K +RLA+++ ++ + VVE
Sbjct: 71 GRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPRKVRRLALTSVLSQKVQEDKLTVVEAL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFD 239
F++PKTK F E + D K T +V+E +E S+RNI +K++ +N+ D
Sbjct: 130 -TFDQPKTKLFKEVLANLKADTK---TLVVLEGDNETAYLSARNIPNVKVIDDYNVNVLD 185
Query: 240 ILDAETLVLTPSTV 253
++DA+ +V+T + +
Sbjct: 186 VVDADRVVITKAAL 199
>gi|228474532|ref|ZP_04059263.1| ribosomal protein L4/L1 family protein [Staphylococcus hominis
SK119]
gi|314935833|ref|ZP_07843185.1| ribosomal protein L4/L1 family protein [Staphylococcus hominis
subsp. hominis C80]
gi|228271195|gb|EEK12563.1| ribosomal protein L4/L1 family protein [Staphylococcus hominis
SK119]
gi|313656398|gb|EFS20138.1| ribosomal protein L4/L1 family protein [Staphylococcus hominis
subsp. hominis C80]
Length = 207
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ N +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENNFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F F+ PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FDAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVSTAQGL 181
Query: 236 NLFDILDAETLVLTPS 251
N+ DI A+++++T S
Sbjct: 182 NVLDITSADSVIITES 197
>gi|11465423|ref|NP_045186.1| ribosomal protein L4 [Cyanidium caldarium]
gi|46396662|sp|Q9TLT3.1|RK4_CYACA RecName: Full=50S ribosomal protein L4, chloroplastic
gi|6466326|gb|AAF12908.1|AF022186_30 unknown [Cyanidium caldarium]
Length = 219
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 11/210 (5%)
Query: 44 LIVSSQLASPLPILSF-TGEKIGETYLDLKS-AAPDTARAVVHRALITDMQNK--RRGTA 99
+V+ Q P+++ TG+ Y+ K + + A VVHR +QNK R TA
Sbjct: 3 FMVTEQKTLIYPVINLITGQ---HNYIGFKCRISTNNANYVVHRVF--SIQNKLSREHTA 57
Query: 100 STLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLA 159
ST T+ +VRGGG+KP+ QK TGRAR GS R+PL GGGVVFGPKP++ KINKKE RLA
Sbjct: 58 STKTKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFGPKPKNVFFKINKKEIRLA 117
Query: 160 ISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK 219
+ T +++A T VV +G T+ I+ +R + + +V + +
Sbjct: 118 LYTVLSNALPK--TTVVSSLEGLPNFISTQALIKFLRSLNVSLDNRVLIVVEKKETPLFL 175
Query: 220 SSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
S RNI L ++ LN+ ++ A++LV+T
Sbjct: 176 SCRNIKNLALIQADHLNVKSVILAQSLVVT 205
>gi|395241920|ref|ZP_10418920.1| 50S ribosomal protein L4 [Lactobacillus pasteurii CRBIP 24.76]
gi|394480668|emb|CCI85160.1| 50S ribosomal protein L4 [Lactobacillus pasteurii CRBIP 24.76]
Length = 205
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 114/200 (57%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ GE L+ K + VV A+I KR+GT+ R VRGGG+K
Sbjct: 4 LKVIDQNGKDSGEITLNDKVFGIEPNENVVFDAIIRQRAGKRQGTSKVKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG+VFGP PR ++ + +K++RLAI + ++ E+
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGIVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLIDEDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF+ + ++ K LV+ +NV+ S+RN+ +K++
Sbjct: 124 IVLDKLT--MSAPKTKEFVSLLASLNVEGK----VLVVSDDKNVQLSARNLPKVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ + L+LT V
Sbjct: 178 GLNVEDAVNYQKLILTQDAV 197
>gi|339006542|ref|ZP_08639117.1| 50S ribosomal protein L4 [Brevibacillus laterosporus LMG 15441]
gi|338775751|gb|EGP35279.1| 50S ribosomal protein L4 [Brevibacillus laterosporus LMG 15441]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG ++G+ L + AV+ A++ ++R+GT R EVRGGGRKP+ QK
Sbjct: 10 TGAQVGDIELAEAVFGIEPNNAVLFDAIVMQQASQRQGTHDVKNRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+N+K +RLA+ +A+++ +V++
Sbjct: 70 TGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSTKVQNNELLVLDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
PKTKEF + +D +K + + +N+ SSRNI K + +N+ D
Sbjct: 130 --TLSAPKTKEFAGILSSLKVD--RKVLIVTADFDQNIALSSRNIPGAKCIDAAGVNVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ + +++T V
Sbjct: 186 LVAHDKVIVTKEAV 199
>gi|328949276|ref|YP_004366613.1| 50S ribosomal protein L4/L1e [Treponema succinifaciens DSM 2489]
gi|328449600|gb|AEB15316.1| ribosomal protein L4/L1e [Treponema succinifaciens DSM 2489]
Length = 212
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ LD K V++ A+ ++ NKR GTA T TR EV G KPY
Sbjct: 5 VYSIDGKELRTINLDDKIFGLPVNEDVIYYAITNELANKRVGTACTKTRAEVHGSNAKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TG ARRG ++P+ GGG +FGPKPRD+S I KKEKRLA+ + ++ A A+ V
Sbjct: 65 KQKGTGNARRGDKKSPITVGGGTIFGPKPRDYSYAIPKKEKRLAMKSILSLQAQADRLTV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F E KTK+ ++ ++ + D ++ L+ + ++++ RN+ + L+ L
Sbjct: 125 VEDF--TIESGKTKDLVKILKNFVKD--ERTVILLKDDDAKIKQAGRNLPNVYFLSYNRL 180
Query: 236 NLFDILDAETLVL 248
D+ +++
Sbjct: 181 RAHDLFYGRKIIM 193
>gi|313123112|ref|YP_004033371.1| 50S ribosomal protein l4 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422845101|ref|ZP_16891811.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|312279675|gb|ADQ60394.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684721|gb|EGD26875.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 205
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 114/198 (57%), Gaps = 6/198 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G GE L+ + + AVV A+I KR+GT+ R VRGGG+KP+
Sbjct: 6 LMDQNGNNAGEVTLNDNVFSVEPNEAVVFDAIIRQRAGKRQGTSKVKNRSAVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGGVVFGP PR ++ + +K++RLAI + ++ +N +V
Sbjct: 66 RQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLLDQNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ + PKTK+F+ + L+ K LV+ +NV+ S++N+ +K++ L
Sbjct: 126 LDKL--TLDAPKTKDFVAILNGLKLEGK----VLVVSDDKNVQLSAKNLPKVKVVPVNGL 179
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D ++ + LVLT V
Sbjct: 180 NVEDAVNYDKLVLTQDDV 197
>gi|418904613|ref|ZP_13458642.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377766153|gb|EHT89986.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ A V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FESPKTKEFKNVLST--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|81429376|ref|YP_396377.1| 50S ribosomal protein L4 [Lactobacillus sakei subsp. sakei 23K]
gi|109893600|sp|Q38UR3.1|RL4_LACSS RecName: Full=50S ribosomal protein L4
gi|78611019|emb|CAI56071.1| 50S ribosomal protein L4 [Lactobacillus sakei subsp. sakei 23K]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + G L+ A + VV A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGNVELNDSIWAIEPNENVVFDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ +K +RLAI + ++ + IVV+ F
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVIDNDLIVVDSF- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTKEF E + + LD K ++ + ++ S+RN+ + ++ +N+ D+
Sbjct: 130 -SFDAPKTKEFAEVLNK--LDVNTKVLVVLEDGNDFTALSARNLPNVTVVPADGINVLDV 186
Query: 241 LDAETLVLTPSTV 253
+ + L+LT + +
Sbjct: 187 VGNQKLILTQAAL 199
>gi|317496189|ref|ZP_07954549.1| ribosomal protein L4/L1 family protein [Gemella morbillorum M424]
gi|316913764|gb|EFV35250.1| ribosomal protein L4/L1 family protein [Gemella morbillorum M424]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + G K+G + + + V+ +A+ + R+GT T R EV GGGRK
Sbjct: 4 LDLFKQDGTKVGAVEANDAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ +K +RLA+ +A++S AA
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAANEV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+E F+ KTK F E + L+ +K F+V E+ EN S RNI ++ +
Sbjct: 124 FALETLT--FDSIKTKNFKEMLSNLSLE--KKVLFVVTELEENTVLSGRNIPGVEFVETT 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN+ DIL + +V T ++
Sbjct: 180 GLNVLDILGSNKVVFTKDALE 200
>gi|156312293|ref|XP_001617803.1| hypothetical protein NEMVEDRAFT_v1g156663 [Nematostella vectensis]
gi|156195877|gb|EDO25703.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Query: 90 DMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSI 149
+ NKR+GT + R E+ G RK QK TG AR GS ++ + GGG +FGP+PR++S
Sbjct: 40 HLANKRQGTHKSKERAEITGSTRKIKKQKGTGTARAGSIKSGVFRGGGRMFGPRPRNYSF 99
Query: 150 KINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL 209
K+NK KRLA +A+++ A N +VVE FD F+ PKTK F+ ++ GL+ K K+ F+
Sbjct: 100 KLNKNLKRLARKSALSTQAKDNNLVVVENFD--FDAPKTKNFVNVLKALGLENK-KSLFV 156
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ E + NV SSRN+ + K++ L+ + +L+A +V ++
Sbjct: 157 LAESNNNVYLSSRNLKSSKVVNASELSTYSVLNANKVVFMEGAIE 201
>gi|343127786|ref|YP_004777717.1| ribosomal L4/L1 family protein [Borrelia bissettii DN127]
gi|342222474|gb|AEL18652.1| ribosomal L4/L1 family protein [Borrelia bissettii DN127]
Length = 209
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK K+LA + ++ AA EN+
Sbjct: 65 KQKGTGRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKKLAFKSVLSLRAADENSFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFN--IESGKTKDLALIIKNFA-SFNGKVVVLLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|290581288|ref|YP_003485680.1| 50S ribosomal protein L4 [Streptococcus mutans NN2025]
gi|347750440|ref|NP_722321.2| 50S ribosomal protein L4 [Streptococcus mutans UA159]
gi|387786953|ref|YP_006252049.1| 50S ribosomal protein L4 [Streptococcus mutans LJ23]
gi|397650562|ref|YP_006491089.1| 50S ribosomal protein L4 [Streptococcus mutans GS-5]
gi|449864625|ref|ZP_21778483.1| 50S ribosomal protein L4 [Streptococcus mutans U2B]
gi|449872626|ref|ZP_21781545.1| 50S ribosomal protein L4 [Streptococcus mutans 8ID3]
gi|449877819|ref|ZP_21783383.1| 50S ribosomal protein L4 [Streptococcus mutans S1B]
gi|449883418|ref|ZP_21785172.1| 50S ribosomal protein L4 [Streptococcus mutans SA38]
gi|449886460|ref|ZP_21786209.1| 50S ribosomal protein L4 [Streptococcus mutans SA41]
gi|449893135|ref|ZP_21788562.1| 50S ribosomal protein L4 [Streptococcus mutans SF12]
gi|449896327|ref|ZP_21789620.1| 50S ribosomal protein L4 [Streptococcus mutans R221]
gi|449904351|ref|ZP_21792652.1| 50S ribosomal protein L4 [Streptococcus mutans M230]
gi|449912604|ref|ZP_21795277.1| 50S ribosomal protein L4 [Streptococcus mutans OMZ175]
gi|449914296|ref|ZP_21795536.1| 50S ribosomal protein L4 [Streptococcus mutans 15JP3]
gi|449920477|ref|ZP_21798494.1| 50S ribosomal protein L4 [Streptococcus mutans 1SM1]
gi|449925022|ref|ZP_21800008.1| 50S ribosomal protein L4 [Streptococcus mutans 4SM1]
gi|449929422|ref|ZP_21801561.1| 50S ribosomal protein L4 [Streptococcus mutans 3SN1]
gi|449936056|ref|ZP_21803781.1| 50S ribosomal protein L4 [Streptococcus mutans 2ST1]
gi|449941683|ref|ZP_21805580.1| 50S ribosomal protein L4 [Streptococcus mutans 11A1]
gi|449946816|ref|ZP_21807059.1| 50S ribosomal protein L4 [Streptococcus mutans 11SSST2]
gi|449956069|ref|ZP_21809386.1| 50S ribosomal protein L4 [Streptococcus mutans 4VF1]
gi|449976601|ref|ZP_21816292.1| 50S ribosomal protein L4 [Streptococcus mutans 11VS1]
gi|449983790|ref|ZP_21818661.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM2]
gi|449989110|ref|ZP_21820921.1| 50S ribosomal protein L4 [Streptococcus mutans NVAB]
gi|449994833|ref|ZP_21822760.1| 50S ribosomal protein L4 [Streptococcus mutans A9]
gi|450006220|ref|ZP_21827098.1| 50S ribosomal protein L4 [Streptococcus mutans NMT4863]
gi|450010932|ref|ZP_21828894.1| 50S ribosomal protein L4 [Streptococcus mutans A19]
gi|450023617|ref|ZP_21830732.1| 50S ribosomal protein L4 [Streptococcus mutans U138]
gi|450030856|ref|ZP_21833456.1| 50S ribosomal protein L4 [Streptococcus mutans G123]
gi|450034353|ref|ZP_21834308.1| 50S ribosomal protein L4 [Streptococcus mutans M21]
gi|450040900|ref|ZP_21837098.1| 50S ribosomal protein L4 [Streptococcus mutans T4]
gi|450047513|ref|ZP_21839476.1| 50S ribosomal protein L4 [Streptococcus mutans N34]
gi|450052821|ref|ZP_21841438.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM1]
gi|450055343|ref|ZP_21841752.1| 50S ribosomal protein L4 [Streptococcus mutans NLML4]
gi|450062486|ref|ZP_21844371.1| 50S ribosomal protein L4 [Streptococcus mutans NLML5]
gi|450067389|ref|ZP_21846597.1| 50S ribosomal protein L4 [Streptococcus mutans NLML9]
gi|450072743|ref|ZP_21848746.1| 50S ribosomal protein L4 [Streptococcus mutans M2A]
gi|450077122|ref|ZP_21850222.1| 50S ribosomal protein L4 [Streptococcus mutans N3209]
gi|450081077|ref|ZP_21851482.1| 50S ribosomal protein L4 [Streptococcus mutans N66]
gi|450092610|ref|ZP_21856115.1| 50S ribosomal protein L4 [Streptococcus mutans W6]
gi|450097247|ref|ZP_21857384.1| 50S ribosomal protein L4 [Streptococcus mutans SF1]
gi|450105628|ref|ZP_21859995.1| 50S ribosomal protein L4 [Streptococcus mutans SF14]
gi|450110707|ref|ZP_21862281.1| 50S ribosomal protein L4 [Streptococcus mutans SM6]
gi|450116188|ref|ZP_21864344.1| 50S ribosomal protein L4 [Streptococcus mutans ST1]
gi|450120944|ref|ZP_21866025.1| 50S ribosomal protein L4 [Streptococcus mutans ST6]
gi|450125125|ref|ZP_21867477.1| 50S ribosomal protein L4 [Streptococcus mutans U2A]
gi|450132177|ref|ZP_21869884.1| 50S ribosomal protein L4 [Streptococcus mutans NLML8]
gi|450140059|ref|ZP_21872769.1| 50S ribosomal protein L4 [Streptococcus mutans NLML1]
gi|450149132|ref|ZP_21875970.1| 50S ribosomal protein L4 [Streptococcus mutans 14D]
gi|450155216|ref|ZP_21878137.1| 50S ribosomal protein L4 [Streptococcus mutans 21]
gi|450159637|ref|ZP_21879568.1| 50S ribosomal protein L4 [Streptococcus mutans 66-2A]
gi|450163943|ref|ZP_21881014.1| 50S ribosomal protein L4 [Streptococcus mutans B]
gi|450170052|ref|ZP_21883328.1| 50S ribosomal protein L4 [Streptococcus mutans SM4]
gi|450180180|ref|ZP_21887072.1| 50S ribosomal protein L4 [Streptococcus mutans 24]
gi|345287736|gb|AAN59627.2|AE015024_19 50S ribosomal protein L4 [Streptococcus mutans UA159]
gi|254998187|dbj|BAH88788.1| 50S ribosomal protein L4 [Streptococcus mutans NN2025]
gi|379133354|dbj|BAL70106.1| 50S ribosomal protein L4 [Streptococcus mutans LJ23]
gi|392604131|gb|AFM82295.1| 50S ribosomal protein L4 [Streptococcus mutans GS-5]
gi|449151873|gb|EMB55594.1| 50S ribosomal protein L4 [Streptococcus mutans 11A1]
gi|449153329|gb|EMB57011.1| 50S ribosomal protein L4 [Streptococcus mutans NLML8]
gi|449154428|gb|EMB58017.1| 50S ribosomal protein L4 [Streptococcus mutans 8ID3]
gi|449158289|gb|EMB61709.1| 50S ribosomal protein L4 [Streptococcus mutans 15JP3]
gi|449158761|gb|EMB62169.1| 50S ribosomal protein L4 [Streptococcus mutans 1SM1]
gi|449162098|gb|EMB65257.1| 50S ribosomal protein L4 [Streptococcus mutans 4SM1]
gi|449164550|gb|EMB67602.1| 50S ribosomal protein L4 [Streptococcus mutans 3SN1]
gi|449165912|gb|EMB68878.1| 50S ribosomal protein L4 [Streptococcus mutans 2ST1]
gi|449169366|gb|EMB72143.1| 50S ribosomal protein L4 [Streptococcus mutans 11SSST2]
gi|449170796|gb|EMB73489.1| 50S ribosomal protein L4 [Streptococcus mutans 4VF1]
gi|449175403|gb|EMB77817.1| 50S ribosomal protein L4 [Streptococcus mutans 11VS1]
gi|449181046|gb|EMB83178.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM2]
gi|449182959|gb|EMB84960.1| 50S ribosomal protein L4 [Streptococcus mutans NVAB]
gi|449184993|gb|EMB86902.1| 50S ribosomal protein L4 [Streptococcus mutans A9]
gi|449187783|gb|EMB89539.1| 50S ribosomal protein L4 [Streptococcus mutans NMT4863]
gi|449189919|gb|EMB91539.1| 50S ribosomal protein L4 [Streptococcus mutans A19]
gi|449192297|gb|EMB93725.1| 50S ribosomal protein L4 [Streptococcus mutans G123]
gi|449193224|gb|EMB94615.1| 50S ribosomal protein L4 [Streptococcus mutans U138]
gi|449196456|gb|EMB97721.1| 50S ribosomal protein L4 [Streptococcus mutans M21]
gi|449197573|gb|EMB98737.1| 50S ribosomal protein L4 [Streptococcus mutans N34]
gi|449198351|gb|EMB99468.1| 50S ribosomal protein L4 [Streptococcus mutans T4]
gi|449199915|gb|EMC00966.1| 50S ribosomal protein L4 [Streptococcus mutans NFSM1]
gi|449205826|gb|EMC06556.1| 50S ribosomal protein L4 [Streptococcus mutans NLML5]
gi|449207646|gb|EMC08315.1| 50S ribosomal protein L4 [Streptococcus mutans NLML4]
gi|449208058|gb|EMC08689.1| 50S ribosomal protein L4 [Streptococcus mutans NLML9]
gi|449210815|gb|EMC11246.1| 50S ribosomal protein L4 [Streptococcus mutans M2A]
gi|449211533|gb|EMC11934.1| 50S ribosomal protein L4 [Streptococcus mutans N3209]
gi|449215554|gb|EMC15736.1| 50S ribosomal protein L4 [Streptococcus mutans N66]
gi|449218163|gb|EMC18185.1| 50S ribosomal protein L4 [Streptococcus mutans W6]
gi|449222930|gb|EMC22642.1| 50S ribosomal protein L4 [Streptococcus mutans SF1]
gi|449224260|gb|EMC23906.1| 50S ribosomal protein L4 [Streptococcus mutans SF14]
gi|449224707|gb|EMC24333.1| 50S ribosomal protein L4 [Streptococcus mutans SM6]
gi|449227211|gb|EMC26649.1| 50S ribosomal protein L4 [Streptococcus mutans ST1]
gi|449229716|gb|EMC29015.1| 50S ribosomal protein L4 [Streptococcus mutans ST6]
gi|449232247|gb|EMC31372.1| 50S ribosomal protein L4 [Streptococcus mutans NLML1]
gi|449232918|gb|EMC32009.1| 50S ribosomal protein L4 [Streptococcus mutans U2A]
gi|449234855|gb|EMC33841.1| 50S ribosomal protein L4 [Streptococcus mutans 14D]
gi|449237323|gb|EMC36180.1| 50S ribosomal protein L4 [Streptococcus mutans 21]
gi|449241045|gb|EMC39692.1| 50S ribosomal protein L4 [Streptococcus mutans 66-2A]
gi|449242400|gb|EMC40986.1| 50S ribosomal protein L4 [Streptococcus mutans B]
gi|449246344|gb|EMC44652.1| 50S ribosomal protein L4 [Streptococcus mutans SM4]
gi|449248460|gb|EMC46703.1| 50S ribosomal protein L4 [Streptococcus mutans 24]
gi|449249867|gb|EMC47961.1| 50S ribosomal protein L4 [Streptococcus mutans SA38]
gi|449250357|gb|EMC48422.1| 50S ribosomal protein L4 [Streptococcus mutans S1B]
gi|449254224|gb|EMC52144.1| 50S ribosomal protein L4 [Streptococcus mutans SA41]
gi|449256054|gb|EMC53889.1| 50S ribosomal protein L4 [Streptococcus mutans SF12]
gi|449257551|gb|EMC55197.1| 50S ribosomal protein L4 [Streptococcus mutans OMZ175]
gi|449259494|gb|EMC57020.1| 50S ribosomal protein L4 [Streptococcus mutans M230]
gi|449262510|gb|EMC59959.1| 50S ribosomal protein L4 [Streptococcus mutans R221]
gi|449264696|gb|EMC62031.1| 50S ribosomal protein L4 [Streptococcus mutans U2B]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE PKTKEF + +D K ++ E ++ E S+RN+ +K+ T T ++ D
Sbjct: 130 S--FEAPKTKEFATVLAALNVD--SKVLVILEEGNQAAELSARNLPNVKVATAATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++++ L++T +
Sbjct: 186 IVNSDKLLVTKEAI 199
>gi|392958544|ref|ZP_10324053.1| 50S ribosomal protein L4 [Bacillus macauensis ZFHKF-1]
gi|391875445|gb|EIT84056.1| 50S ribosomal protein L4 [Bacillus macauensis ZFHKF-1]
Length = 207
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ I G + G+ L+ + + V+ A++ + R+G R EV GGGRK
Sbjct: 4 VAIFKQDGTQAGDLELNASVFGIEPNKNVLFDAVVMQQASLRQGNHDVKNRSEVAGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI +A++S +
Sbjct: 64 PWKQKGTGRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPKKVRRLAIKSALSSKVIDNDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+V++ FE PKTK+ + + D +KA + + +E V S+RNI + ++T
Sbjct: 124 VVLDALS--FEAPKTKDMKKVLENLSAD--RKALVVTGDFNEFVALSARNIPGVTVVTAS 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
+N+ D+L + LV+T V+
Sbjct: 180 GVNVLDVLKHDKLVMTKDAVE 200
>gi|451980684|ref|ZP_21929070.1| 50S ribosomal protein L4 [Nitrospina gracilis 3/211]
gi|451762020|emb|CCQ90309.1| 50S ribosomal protein L4 [Nitrospina gracilis 3/211]
Length = 208
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 121/207 (58%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTL-TRGEVRGGGR 112
L I++ +K+G L + +V + ++ + KR GTAST+ RG++ GGG+
Sbjct: 4 LEIVNTENKKVGTATLSPEVFEGPVREHLVQQYVVMQLATKRSGTASTIENRGDISGGGK 63
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
KP+ QK TGRAR GS R+ + GG VFGP+PR ++ K++KK ++LAI + +A + N
Sbjct: 64 KPWRQKGTGRARHGSTRSTIWRGGMTVFGPRPRAYTHKLSKKSRKLAIRSVLAERLQSNN 123
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
VVE + E PKTK+ + + + L +K FLV E + N+E + RN+ + +L+
Sbjct: 124 IQVVESLN--LEEPKTKQALALLGK--LGLPEKTLFLVAEKNPNLELAVRNLPQVNVLSV 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGR 259
+N+FD+L + +V TP ++ L R
Sbjct: 180 EGVNVFDLLVHQKIVCTPDSLKKLEER 206
>gi|421875276|ref|ZP_16306870.1| 50S ribosomal protein L4 [Brevibacillus laterosporus GI-9]
gi|372455744|emb|CCF16419.1| 50S ribosomal protein L4 [Brevibacillus laterosporus GI-9]
Length = 207
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG ++G+ L + AV+ A++ ++R+GT R EVRGGGRKP+ QK
Sbjct: 10 TGAQVGDIELAEAVFGIEPNNAVLFDAIVMQQASQRQGTHDVKNRSEVRGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+N+K +RLA+ +A+++ +V++
Sbjct: 70 TGRARQGSIRSPQWKGGGVVFGPTPRKYGYKLNRKVRRLALKSALSTKVQNNELLVLDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
PKTKEF + +D +K + + +N+ SSRNI K + +N+ D
Sbjct: 130 --TMSAPKTKEFAGILSSLKVD--RKVLIVTADFDQNIALSSRNIPGAKCIDAAGVNVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ + +++T V
Sbjct: 186 LVAHDKVIVTKEAV 199
>gi|15925239|ref|NP_372773.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu50]
gi|15927829|ref|NP_375362.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus N315]
gi|21283897|ref|NP_646985.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus MW2]
gi|49487031|ref|YP_044252.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650833|ref|YP_187048.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus COL]
gi|82751838|ref|YP_417579.1| 50S ribosomal protein L4 [Staphylococcus aureus RF122]
gi|87160155|ref|YP_494838.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196161|ref|YP_500978.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148268689|ref|YP_001247632.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus JH9]
gi|150394754|ref|YP_001317429.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus JH1]
gi|151222363|ref|YP_001333185.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156980564|ref|YP_001442823.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu3]
gi|221140149|ref|ZP_03564642.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317009|ref|ZP_04840222.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253729915|ref|ZP_04864080.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734342|ref|ZP_04868507.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255007029|ref|ZP_05145630.2| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794595|ref|ZP_05643574.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9781]
gi|258408803|ref|ZP_05681087.1| 50S ribosomal protein L4 [Staphylococcus aureus A9763]
gi|258422402|ref|ZP_05685314.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9719]
gi|258422696|ref|ZP_05685601.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9635]
gi|258439791|ref|ZP_05690537.1| ribosomal protein L4 [Staphylococcus aureus A9299]
gi|258442653|ref|ZP_05691213.1| ribosomal protein L4/L1e [Staphylococcus aureus A8115]
gi|258446648|ref|ZP_05694803.1| 50S ribosomal protein L4 [Staphylococcus aureus A6300]
gi|258450234|ref|ZP_05698326.1| 50S ribosomal protein L4 [Staphylococcus aureus A6224]
gi|258450756|ref|ZP_05698815.1| ribosomal protein L4/L1e [Staphylococcus aureus A5948]
gi|258455394|ref|ZP_05703354.1| ribosomal protein L4/L1e [Staphylococcus aureus A5937]
gi|262048513|ref|ZP_06021397.1| 50S ribosomal protein L4 [Staphylococcus aureus D30]
gi|262052038|ref|ZP_06024249.1| 50S ribosomal protein L4 [Staphylococcus aureus 930918-3]
gi|269203882|ref|YP_003283151.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus ED98]
gi|282893687|ref|ZP_06301919.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8117]
gi|282917594|ref|ZP_06325346.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
D139]
gi|282922118|ref|ZP_06329814.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9765]
gi|283767341|ref|ZP_06340256.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus H19]
gi|284025275|ref|ZP_06379673.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus 132]
gi|294848782|ref|ZP_06789527.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9754]
gi|295404925|ref|ZP_06814738.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8819]
gi|296275960|ref|ZP_06858467.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus MR1]
gi|297209938|ref|ZP_06926334.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297243983|ref|ZP_06927873.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8796]
gi|300910950|ref|ZP_07128400.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|304379433|ref|ZP_07362168.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379015373|ref|YP_005291609.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VC40]
gi|379021913|ref|YP_005298575.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus M013]
gi|384548456|ref|YP_005737709.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ED133]
gi|384551035|ref|YP_005740287.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384862893|ref|YP_005745613.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384865431|ref|YP_005750790.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384870797|ref|YP_005753511.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
T0131]
gi|385782484|ref|YP_005758655.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
11819-97]
gi|386729955|ref|YP_006196338.1| 50S ribosomal protein L4P [Staphylococcus aureus subsp. aureus
71193]
gi|386831821|ref|YP_006238475.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387143954|ref|YP_005732348.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus TW20]
gi|387151372|ref|YP_005742936.1| 50S ribosomal protein L4 [Staphylococcus aureus 04-02981]
gi|387603533|ref|YP_005735054.1| ribosomal protein L4/L1 family [Staphylococcus aureus subsp. aureus
ST398]
gi|387781212|ref|YP_005756010.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
LGA251]
gi|404479543|ref|YP_006710973.1| 50S ribosomal protein L4 [Staphylococcus aureus 08BA02176]
gi|415686906|ref|ZP_11450910.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS01]
gi|415692898|ref|ZP_11454789.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS03]
gi|416840553|ref|ZP_11903800.1| 50S ribosomal protein L4 [Staphylococcus aureus O11]
gi|416846677|ref|ZP_11906666.1| 50S ribosomal protein L4 [Staphylococcus aureus O46]
gi|417647844|ref|ZP_12297675.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21189]
gi|417652982|ref|ZP_12302720.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21172]
gi|417654631|ref|ZP_12304347.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21193]
gi|417795965|ref|ZP_12443182.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21305]
gi|417800514|ref|ZP_12447633.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21310]
gi|417801798|ref|ZP_12448880.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21318]
gi|417890906|ref|ZP_12534974.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21200]
gi|417893283|ref|ZP_12537318.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21201]
gi|417898922|ref|ZP_12542834.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21259]
gi|417900871|ref|ZP_12544749.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21266]
gi|417903514|ref|ZP_12547358.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21269]
gi|418279676|ref|ZP_12892887.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21178]
gi|418283860|ref|ZP_12896597.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21202]
gi|418287064|ref|ZP_12899696.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21209]
gi|418306863|ref|ZP_12918622.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21194]
gi|418310944|ref|ZP_12922475.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21331]
gi|418314361|ref|ZP_12925839.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21334]
gi|418319179|ref|ZP_12930565.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21232]
gi|418320234|ref|ZP_12931597.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VCU006]
gi|418425413|ref|ZP_12998505.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS1]
gi|418428304|ref|ZP_13001291.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS2]
gi|418431189|ref|ZP_13004088.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418435096|ref|ZP_13006945.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS4]
gi|418437863|ref|ZP_13009638.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS5]
gi|418440795|ref|ZP_13012479.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS6]
gi|418443765|ref|ZP_13015350.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS7]
gi|418446764|ref|ZP_13018224.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS8]
gi|418449853|ref|ZP_13021222.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS9]
gi|418452687|ref|ZP_13024008.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455647|ref|ZP_13026895.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418458523|ref|ZP_13029711.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418560150|ref|ZP_13124672.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21252]
gi|418563535|ref|ZP_13127971.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21262]
gi|418568432|ref|ZP_13132778.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21272]
gi|418572018|ref|ZP_13136233.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21283]
gi|418573202|ref|ZP_13137402.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21333]
gi|418577450|ref|ZP_13141548.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599499|ref|ZP_13162982.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21343]
gi|418639956|ref|ZP_13202194.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-3]
gi|418642224|ref|ZP_13204419.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-24]
gi|418645222|ref|ZP_13207349.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-55]
gi|418648043|ref|ZP_13210093.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-88]
gi|418650862|ref|ZP_13212879.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-91]
gi|418653538|ref|ZP_13215476.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-99]
gi|418657465|ref|ZP_13219232.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-105]
gi|418660091|ref|ZP_13221735.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-111]
gi|418663005|ref|ZP_13224533.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-122]
gi|418872397|ref|ZP_13426737.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-125]
gi|418876104|ref|ZP_13430352.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418876456|ref|ZP_13430698.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881937|ref|ZP_13436147.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418882211|ref|ZP_13436415.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418884860|ref|ZP_13439016.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418887485|ref|ZP_13441624.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418893028|ref|ZP_13447133.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418901816|ref|ZP_13455860.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418910079|ref|ZP_13464067.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG547]
gi|418912831|ref|ZP_13466805.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418918315|ref|ZP_13472264.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418923975|ref|ZP_13477881.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418926816|ref|ZP_13480706.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418929692|ref|ZP_13483544.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418932553|ref|ZP_13486379.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418946774|ref|ZP_13499183.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-157]
gi|418951668|ref|ZP_13503747.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-160]
gi|418955167|ref|ZP_13507115.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-189]
gi|418980700|ref|ZP_13528474.1| LSU ribosomal protein L1E (L4P) [Staphylococcus aureus subsp.
aureus DR10]
gi|418989280|ref|ZP_13536947.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418989455|ref|ZP_13537119.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418992240|ref|ZP_13539885.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG290]
gi|419774883|ref|ZP_14300836.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CO-23]
gi|419786249|ref|ZP_14311986.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-M]
gi|421149847|ref|ZP_15609504.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|422743263|ref|ZP_16797255.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA177]
gi|422746515|ref|ZP_16800447.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA131]
gi|424774969|ref|ZP_18201970.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus CM05]
gi|424786232|ref|ZP_18213023.1| LSU ribosomal protein L4p (L1e) [Staphylococcus aureus CN79]
gi|440706709|ref|ZP_20887433.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21282]
gi|440735607|ref|ZP_20915210.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443635894|ref|ZP_21120013.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21236]
gi|443640544|ref|ZP_21124532.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21196]
gi|448742581|ref|ZP_21724521.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/314250]
gi|448745007|ref|ZP_21726882.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/Y21]
gi|46577149|sp|P61058.1|RL4_STAAM RecName: Full=50S ribosomal protein L4
gi|46577150|sp|P61059.1|RL4_STAAN RecName: Full=50S ribosomal protein L4
gi|46577151|sp|P61060.1|RL4_STAAW RecName: Full=50S ribosomal protein L4
gi|56749373|sp|Q6G772.1|RL4_STAAS RecName: Full=50S ribosomal protein L4
gi|81693960|sp|Q5HDV9.1|RL4_STAAC RecName: Full=50S ribosomal protein L4
gi|109893640|sp|Q2FEP0.1|RL4_STAA3 RecName: Full=50S ribosomal protein L4
gi|109893641|sp|Q2YYP7.1|RL4_STAAB RecName: Full=50S ribosomal protein L4
gi|122538859|sp|Q2FW07.1|RL4_STAA8 RecName: Full=50S ribosomal protein L4
gi|166199911|sp|A7X5G2.1|RL4_STAA1 RecName: Full=50S ribosomal protein L4
gi|172049047|sp|A6QJ91.1|RL4_STAAE RecName: Full=50S ribosomal protein L4
gi|189042887|sp|A6U3X4.1|RL4_STAA2 RecName: Full=50S ribosomal protein L4
gi|189042888|sp|A5IV33.1|RL4_STAA9 RecName: Full=50S ribosomal protein L4
gi|13702049|dbj|BAB43341.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus N315]
gi|14248022|dbj|BAB58411.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu50]
gi|21205339|dbj|BAB96033.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus MW2]
gi|49245474|emb|CAG43951.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285019|gb|AAW37113.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus COL]
gi|82657369|emb|CAI81810.1| 50S ribosomal protein L4 [Staphylococcus aureus RF122]
gi|87126129|gb|ABD20643.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203719|gb|ABD31529.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741758|gb|ABQ50056.1| LSU ribosomal protein L4P [Staphylococcus aureus subsp. aureus JH9]
gi|149947206|gb|ABR53142.1| ribosomal protein L4/L1e [Staphylococcus aureus subsp. aureus JH1]
gi|150375163|dbj|BAF68423.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722699|dbj|BAF79116.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus Mu3]
gi|253726362|gb|EES95091.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727659|gb|EES96388.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257788567|gb|EEV26907.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9781]
gi|257840486|gb|EEV64946.1| 50S ribosomal protein L4 [Staphylococcus aureus A9763]
gi|257841833|gb|EEV66270.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9719]
gi|257847107|gb|EEV71116.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus A9635]
gi|257847567|gb|EEV71569.1| ribosomal protein L4 [Staphylococcus aureus A9299]
gi|257851774|gb|EEV75708.1| ribosomal protein L4/L1e [Staphylococcus aureus A8115]
gi|257854716|gb|EEV77664.1| 50S ribosomal protein L4 [Staphylococcus aureus A6300]
gi|257856326|gb|EEV79235.1| 50S ribosomal protein L4 [Staphylococcus aureus A6224]
gi|257861539|gb|EEV84341.1| ribosomal protein L4/L1e [Staphylococcus aureus A5948]
gi|257862605|gb|EEV85373.1| ribosomal protein L4/L1e [Staphylococcus aureus A5937]
gi|259160093|gb|EEW45126.1| 50S ribosomal protein L4 [Staphylococcus aureus 930918-3]
gi|259163371|gb|EEW47929.1| 50S ribosomal protein L4 [Staphylococcus aureus D30]
gi|262076172|gb|ACY12145.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus ED98]
gi|269941838|emb|CBI50248.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus TW20]
gi|282318556|gb|EFB48914.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
D139]
gi|282593586|gb|EFB98579.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9765]
gi|282763745|gb|EFC03873.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8117]
gi|283461220|gb|EFC08304.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus H19]
gi|283471471|emb|CAQ50682.1| ribosomal protein L4/L1 family [Staphylococcus aureus subsp. aureus
ST398]
gi|285817911|gb|ADC38398.1| 50S ribosomal protein L4 [Staphylococcus aureus 04-02981]
gi|294824161|gb|EFG40585.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A9754]
gi|294969870|gb|EFG45888.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8819]
gi|296885611|gb|EFH24548.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|297178761|gb|EFH38006.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A8796]
gi|298695505|gb|ADI98727.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ED133]
gi|300887930|gb|EFK83125.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|302333885|gb|ADL24078.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302752122|gb|ADL66299.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304341965|gb|EFM07869.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|312830598|emb|CBX35440.1| 50S ribosomal protein L4 (BL4) [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129671|gb|EFT85662.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198221|gb|EFU28552.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140213|gb|EFW32072.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320143483|gb|EFW35264.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MRSA177]
gi|323440071|gb|EGA97786.1| 50S ribosomal protein L4 [Staphylococcus aureus O11]
gi|323442745|gb|EGB00371.1| 50S ribosomal protein L4 [Staphylococcus aureus O46]
gi|329314932|gb|AEB89345.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
T0131]
gi|329723693|gb|EGG60222.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21172]
gi|329730071|gb|EGG66461.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21193]
gi|329732021|gb|EGG68376.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21189]
gi|334270378|gb|EGL88783.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21305]
gi|334271060|gb|EGL89455.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21310]
gi|334276059|gb|EGL94327.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21318]
gi|341846640|gb|EGS87831.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21266]
gi|341846851|gb|EGS88039.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21259]
gi|341849928|gb|EGS91064.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21269]
gi|341853784|gb|EGS94664.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21200]
gi|341855479|gb|EGS96324.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21201]
gi|344178314|emb|CCC88800.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
LGA251]
gi|359831222|gb|AEV79200.1| LSU ribosomal protein L4p (L1e) [Staphylococcus aureus subsp.
aureus M013]
gi|364523473|gb|AEW66223.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
11819-97]
gi|365164488|gb|EHM56402.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21209]
gi|365165771|gb|EHM57520.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21202]
gi|365170329|gb|EHM61354.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21178]
gi|365227938|gb|EHM69125.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VCU006]
gi|365233987|gb|EHM74929.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21334]
gi|365235734|gb|EHM76645.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21331]
gi|365241432|gb|EHM82178.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21232]
gi|365246254|gb|EHM86824.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21194]
gi|371970773|gb|EHO88189.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21262]
gi|371972861|gb|EHO90230.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21252]
gi|371977717|gb|EHO94977.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21283]
gi|371979661|gb|EHO96887.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21272]
gi|371983289|gb|EHP00436.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21333]
gi|374364070|gb|AEZ38175.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VC40]
gi|374396815|gb|EHQ68040.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21343]
gi|375015574|gb|EHS09221.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-3]
gi|375017272|gb|EHS10893.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-24]
gi|375018726|gb|EHS12296.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-99]
gi|375023576|gb|EHS17026.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-55]
gi|375027308|gb|EHS20672.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-88]
gi|375027518|gb|EHS20881.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-91]
gi|375030629|gb|EHS23939.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-105]
gi|375033194|gb|EHS26399.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-111]
gi|375034998|gb|EHS28137.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-122]
gi|375367239|gb|EHS71206.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-125]
gi|375371620|gb|EHS75390.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-189]
gi|375371956|gb|EHS75713.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-160]
gi|375377424|gb|EHS80892.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-157]
gi|377698773|gb|EHT23120.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377699332|gb|EHT23678.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377700875|gb|EHT25208.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377715567|gb|EHT39756.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377718120|gb|EHT42292.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377718692|gb|EHT42863.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377725906|gb|EHT50018.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377727893|gb|EHT51995.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG547]
gi|377728802|gb|EHT52898.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377729561|gb|EHT53653.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377740526|gb|EHT64522.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377745169|gb|EHT69145.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377748242|gb|EHT72203.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377749557|gb|EHT73505.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG290]
gi|377756098|gb|EHT79995.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377758874|gb|EHT82755.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377767832|gb|EHT91618.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377768601|gb|EHT92379.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377772727|gb|EHT96473.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|379991559|gb|EIA13030.1| LSU ribosomal protein L1E (L4P) [Staphylococcus aureus subsp.
aureus DR10]
gi|383360895|gb|EID38281.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-M]
gi|383971282|gb|EID87361.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CO-23]
gi|384231248|gb|AFH70495.1| LSU ribosomal protein L1E (L4P) [Staphylococcus aureus subsp.
aureus 71193]
gi|385197213|emb|CCG16859.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387715937|gb|EIK04003.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS2]
gi|387716429|gb|EIK04487.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387716976|gb|EIK05013.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS1]
gi|387723639|gb|EIK11372.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS4]
gi|387725035|gb|EIK12665.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS5]
gi|387728127|gb|EIK15626.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS6]
gi|387733076|gb|EIK20273.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS8]
gi|387734069|gb|EIK21225.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS7]
gi|387734396|gb|EIK21549.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus VRS9]
gi|387741967|gb|EIK28791.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387742542|gb|EIK29355.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387743749|gb|EIK30534.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394330022|gb|EJE56119.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402347071|gb|EJU82138.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus CM05]
gi|404441032|gb|AFR74225.1| 50S ribosomal protein L4 [Staphylococcus aureus 08BA02176]
gi|408424161|emb|CCJ11572.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408426150|emb|CCJ13537.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408428138|emb|CCJ15501.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408430127|emb|CCJ27292.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408432114|emb|CCJ19429.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408434108|emb|CCJ21393.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408436101|emb|CCJ23361.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|408438084|emb|CCJ25327.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
ST228]
gi|421955501|gb|EKU07839.1| LSU ribosomal protein L4p (L1e) [Staphylococcus aureus CN79]
gi|436430487|gb|ELP27849.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506860|gb|ELP42619.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21282]
gi|443405065|gb|ELS63677.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21196]
gi|443408710|gb|ELS67227.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21236]
gi|445546740|gb|ELY15026.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/314250]
gi|445561623|gb|ELY17815.1| 50S ribosomal protein L4 [Staphylococcus aureus KT/Y21]
Length = 207
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ A V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLST--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|449982793|ref|ZP_21818430.1| 50S ribosomal protein L4 [Streptococcus mutans 5SM3]
gi|450002132|ref|ZP_21825917.1| 50S ribosomal protein L4 [Streptococcus mutans N29]
gi|449174550|gb|EMB77031.1| 50S ribosomal protein L4 [Streptococcus mutans 5SM3]
gi|449183669|gb|EMB85646.1| 50S ribosomal protein L4 [Streptococcus mutans N29]
Length = 207
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE PKTKEF + +D K ++ E ++ E S+RN+ +K+ T T ++ D
Sbjct: 130 S--FEAPKTKEFATVLAALNVD--SKVLVILEEGNQAAELSARNLPNVKVATAATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++++ L++T +
Sbjct: 186 IVNSDKLLVTKEAI 199
>gi|425737517|ref|ZP_18855789.1| 50S ribosomal protein L4 [Staphylococcus massiliensis S46]
gi|425481771|gb|EKU48929.1| 50S ribosomal protein L4 [Staphylococcus massiliensis S46]
Length = 207
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 6/197 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT S R VRGGG+KP+
Sbjct: 6 VLKVDGSKAGSVELNDAVFAIEPNESVLFEAINLQRASLRQGTHSVKNRSAVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENEFKI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLTPRT 234
V+ F+ E PKTKEF + L+ K +V E + NVE S+RNI +++ TP
Sbjct: 126 VDGFN--LEAPKTKEFKTTLTNLDLNKK---VLVVTEAEDVNVELSARNIQGVQITTPEG 180
Query: 235 LNLFDILDAETLVLTPS 251
LN+ D+ A+++++T S
Sbjct: 181 LNVLDMTSADSVLITES 197
>gi|307718207|ref|YP_003873739.1| hypothetical protein STHERM_c04970 [Spirochaeta thermophila DSM
6192]
gi|386346267|ref|YP_006044516.1| 50S ribosomal protein L4 [Spirochaeta thermophila DSM 6578]
gi|306531932|gb|ADN01466.1| hypothetical protein STHERM_c04970 [Spirochaeta thermophila DSM
6192]
gi|339411234|gb|AEJ60799.1| ribosomal protein L4/L1e [Spirochaeta thermophila DSM 6578]
Length = 208
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 7/204 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S GE I L+ + A + + ++ A+ ++ N R GTAST TR EV G GRKP+
Sbjct: 5 VYSLKGEPIKTIELNDRVFACEVSHGSIYHAIRNELANMRVGTASTKTRAEVSGSGRKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G R+PL GGGVVFGPKPR++ K+ +K KRLA + + S EN
Sbjct: 65 RQKGTGRARAGERRSPLWVGGGVVFGPKPREYGYKLPRKVKRLAYRSVL-SLKLRENAFR 123
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKMLTPR 233
VVE+F E KTK+ ++A++ L+P+ + LV+ E S +++ RNI L + T
Sbjct: 124 VVEDF--VVESGKTKDMVKALQ--ALNPEGRRVLLVIGEESALTKRAGRNIPWLLVHTYD 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLN 257
L + D+ A+ +++ S LN
Sbjct: 180 KLRVHDVFYADQVLVQESAAVKLN 203
>gi|329770039|ref|ZP_08261434.1| 50S ribosomal protein L4 [Gemella sanguinis M325]
gi|328837350|gb|EGF86980.1| 50S ribosomal protein L4 [Gemella sanguinis M325]
Length = 207
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L + G K+G + + + V+ +A+ + R+GT T R EV GGGRK
Sbjct: 4 LDLFKQDGTKVGAVEANDAVFGIEPNQHVLFQAVTLQRASLRQGTHKTKGRSEVSGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG+VFGP PR +S K+ +K +RLA+ +A++S AA
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYSFKMPRKMRRLALRSALSSKVAANEV 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
+E F+ KTK F E + L+ +K F+V E+ EN S RNI ++ +
Sbjct: 124 FALETL--AFDTIKTKNFKEMLSNLSLE--KKVLFVVTELEENTVLSGRNIPGVEFVETT 179
Query: 234 TLNLFDILDAETLVLTPSTVD 254
LN+ DIL + +V T ++
Sbjct: 180 GLNVLDILGSNKVVFTKDALE 200
>gi|451343254|ref|ZP_21912328.1| 50S ribosomal protein L4 [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449338028|gb|EMD17182.1| 50S ribosomal protein L4 [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 207
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
GEKI + L+ + + ++ + R+GT R VRGGGRKPY QK T
Sbjct: 11 GEKINDLDLNELVFGIEPNNQAIFDMVLLQRASLRQGTHKVKNRSAVRGGGRKPYRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+G+ R P GGGVVFGP R + K+N+K RLA+ +A++ I+ +EF
Sbjct: 71 GRARQGTIRAPQFVGGGVVFGPTQRKYGFKLNRKVARLALKSALSQ------KIIDKEFT 124
Query: 181 G----KFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLN 236
FE KTK +E ++ + + +K +V E ENV S RNI LK++ +N
Sbjct: 125 ALDALSFETIKTKNMVEVLKAF--NSPRKVLLVVDEFDENVLLSCRNIPNLKLIEANGIN 182
Query: 237 LFDILDAETLVLTPSTV 253
++DILD L++T V
Sbjct: 183 VYDILDCTNLMMTEKAV 199
>gi|381186295|ref|ZP_09893867.1| 50S ribosomal protein L4 [Flavobacterium frigoris PS1]
gi|379651730|gb|EIA10293.1| 50S ribosomal protein L4 [Flavobacterium frigoris PS1]
Length = 209
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
+ +L F G+ G K D+ A+ + A+ D++ N+R+GT R EV
Sbjct: 3 VKVLDFNGKDTGR-----KVQLSDSVFAIEPNNHAVYLDVKQYLANQRQGTHKAKERAEV 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK QK TG AR GS + PL GGG VFGP+PR +S K+NK KRLA +A +
Sbjct: 58 AGSTRKIKKQKGTGTARAGSAKNPLFKGGGTVFGPRPRSYSFKLNKNLKRLARKSAFSIK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A N IV+E+F+ FE P TK FI ++ L+ K K+ F++ +V++NV SSRN+
Sbjct: 118 AKESNIIVLEDFN--FETPNTKNFINVLKALELENK-KSLFVLGDVNKNVYLSSRNLKAS 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+++ L+ + IL+A LVL S+++ +
Sbjct: 175 SVVSSLELSTYAILNANNLVLLESSLEII 203
>gi|325269534|ref|ZP_08136150.1| 50S ribosomal protein L4 [Prevotella multiformis DSM 16608]
gi|324988153|gb|EGC20120.1| 50S ribosomal protein L4 [Prevotella multiformis DSM 16608]
Length = 209
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V++ A+ + ++R+GTA + R E G RK QK G ARRG +P+ GGG VFG
Sbjct: 32 VLYLAVKQYLADQRQGTAKSKERSEHAGSTRKLGRQKGGGGARRGDINSPVLVGGGRVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S K+NKK K LA +A+A A +VVE+FD F+ PKTK+F+ + +D
Sbjct: 92 PKPRDYSFKLNKKVKVLARKSALAYKAQENAIVVVEDFD--FDAPKTKDFVNIAKNLKVD 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258
K K L+ V +NV S+RN+ +++T +N + IL+A+ LV+T +++ ++G
Sbjct: 150 GK-KILLLLPGVEKNVYLSARNLQKTEVMTAAQVNSYKILNADVLVVTENSLKVIDG 205
>gi|409097764|ref|ZP_11217788.1| 50S ribosomal protein L4 [Pedobacter agri PB92]
Length = 209
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 102/167 (61%), Gaps = 5/167 (2%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK Y QK TG AR GS ++PL GGG VFGP+PRD+S K
Sbjct: 41 LANQRQGTHKSKQRNEIAGSTRKLYKQKGTGGARAGSIKSPLFNGGGRVFGPQPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+A A + +V+E+F+ F+ KTK + + L+ + T LV
Sbjct: 101 LNKKLKSLARKSALAYKAKDNSVVVLEDFN--FDTAKTKNYTSLL--AALNVGTQKTLLV 156
Query: 211 MEV-SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ + N+ SSRN+ K+++ LN +D+L+A LVLT +V L
Sbjct: 157 LPAQNNNIYLSSRNVQKTKVISAADLNTYDVLNAGVLVLTADSVKTL 203
>gi|332882108|ref|ZP_08449743.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357048267|ref|ZP_09109821.1| 50S ribosomal protein L4 [Paraprevotella clara YIT 11840]
gi|332680032|gb|EGJ52994.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355528850|gb|EHG98328.1| 50S ribosomal protein L4 [Paraprevotella clara YIT 11840]
Length = 209
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 8/207 (3%)
Query: 54 LPILSFTGEKIGETYL---DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+ +L+ GE G L + + P+ V++ + + N+R+GTA + R EV G
Sbjct: 3 VSVLNIKGEDTGRKVLLNDSIFNIEPNDH--VIYLDVKQYLANQRQGTAKSKERSEVSGS 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
RK QK G ARRG +P+ GGG VFGPKPRD+ K+NKK K LA +A+ S A
Sbjct: 61 TRKLGRQKGGGGARRGDINSPVLVGGGRVFGPKPRDYGFKLNKKVKVLARKSAL-SYKAK 119
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
EN IVV E D E PKTK+F+E + +D K KA F++ ++NV S+RNI + ++
Sbjct: 120 ENAIVVVE-DFTMEAPKTKQFVEIINNLKVDGK-KALFVLPGANKNVYLSARNIERVNVM 177
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLN 257
T LN + +L+A+ +V+T +++ ++
Sbjct: 178 TAAALNTYKVLNADVMVVTENSLKVVD 204
>gi|15594824|ref|NP_212613.1| 50S ribosomal protein L4 [Borrelia burgdorferi B31]
gi|195941616|ref|ZP_03086998.1| 50S ribosomal protein L4 [Borrelia burgdorferi 80a]
gi|216264894|ref|ZP_03436886.1| ribosomal protein L4/L1 family protein [Borrelia burgdorferi 156a]
gi|221218083|ref|ZP_03589549.1| 50S ribosomal protein L4 [Borrelia burgdorferi 72a]
gi|223888691|ref|ZP_03623282.1| 50S ribosomal protein L4 [Borrelia burgdorferi 64b]
gi|224533597|ref|ZP_03674186.1| 50S ribosomal protein L4 [Borrelia burgdorferi CA-11.2a]
gi|225548627|ref|ZP_03769674.1| 50S ribosomal protein L4 [Borrelia burgdorferi 94a]
gi|225549551|ref|ZP_03770517.1| 50S ribosomal protein L4 [Borrelia burgdorferi 118a]
gi|225552234|ref|ZP_03773174.1| 50S ribosomal protein L4 [Borrelia sp. SV1]
gi|226321111|ref|ZP_03796653.1| 50S ribosomal protein L4 [Borrelia burgdorferi 29805]
gi|387826123|ref|YP_005805576.1| 50S ribosomal protein L4/L1 family [Borrelia burgdorferi JD1]
gi|387827386|ref|YP_005806668.1| 50S ribosomal protein L4 [Borrelia burgdorferi N40]
gi|3915828|sp|P94268.2|RL4_BORBU RecName: Full=50S ribosomal protein L4
gi|2688412|gb|AAC66863.1| ribosomal protein L4/L1 family [Borrelia burgdorferi B31]
gi|215981367|gb|EEC22174.1| ribosomal protein L4/L1 family protein [Borrelia burgdorferi 156a]
gi|221192031|gb|EEE18252.1| 50S ribosomal protein L4 [Borrelia burgdorferi 72a]
gi|223885507|gb|EEF56606.1| 50S ribosomal protein L4 [Borrelia burgdorferi 64b]
gi|224513270|gb|EEF83632.1| 50S ribosomal protein L4 [Borrelia burgdorferi CA-11.2a]
gi|225369828|gb|EEG99275.1| 50S ribosomal protein L4 [Borrelia burgdorferi 118a]
gi|225370657|gb|EEH00093.1| 50S ribosomal protein L4 [Borrelia burgdorferi 94a]
gi|225371232|gb|EEH00662.1| 50S ribosomal protein L4 [Borrelia sp. SV1]
gi|226233521|gb|EEH32260.1| 50S ribosomal protein L4 [Borrelia burgdorferi 29805]
gi|312148420|gb|ADQ31079.1| ribosomal protein L4/L1 family [Borrelia burgdorferi JD1]
gi|312149445|gb|ADQ29516.1| 50S ribosomal protein L4 [Borrelia burgdorferi N40]
Length = 209
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK K+LA + ++ AA EN+
Sbjct: 65 KQKGTGRARVGTKRNPVWIGGGIALGPKPRDYSYRLPKKVKKLAFKSVLSLRAADENSFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFN--VESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|365926342|ref|ZP_09449105.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420265979|ref|ZP_14768491.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426842|gb|EJE99634.1| 50S ribosomal protein L4 [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 207
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K GE L+ + VV A+I + R+GT + R +V GGG+KP+ QK T
Sbjct: 11 GSKNGEVELNENIFGIEPNDNVVFDAVIMQRASLRQGTHAVKNRSDVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI + ++ E+ ++V++
Sbjct: 71 GRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPKKVRRLAIKSVLSQKVLNESLLIVDKLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F++PKTK F E + LD K K ++ + ++ S+RN+ + +++ + +N+ D+
Sbjct: 131 --FDQPKTKAFAEVLN--SLDVKTKVLVVLEDGNDLAALSARNLPNVTVVSAKGVNVLDV 186
Query: 241 LDAETLVLT 249
++++ LV+T
Sbjct: 187 INSDKLVMT 195
>gi|383449890|ref|YP_005356611.1| 50S ribosomal protein L4 [Flavobacterium indicum GPTSA100-9]
gi|380501512|emb|CCG52554.1| 50S ribosomal protein L4 [Flavobacterium indicum GPTSA100-9]
Length = 209
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT R EV G RK QK TG AR GS ++P+ GGG +FGP+PR++S K
Sbjct: 41 LANQRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFGPRPRNYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A++ A N +VVE+F F+ P TK FI ++ GLD K K+ F++
Sbjct: 101 LNKNLKRLARKSALSLKAKENNLVVVEDFT--FDAPNTKNFINVLKALGLDNK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ NV SSRN+ + ++T L+ + IL+ +LVL V+
Sbjct: 158 GAANNNVYLSSRNLKSSSVVTNSELSTYTILNNNSLVLLEGAVE 201
>gi|417895551|ref|ZP_12539537.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21235]
gi|341841679|gb|EGS83132.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21235]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ A V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLST--LEQLKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|378972695|ref|YP_005221299.1| 50S ribosomal protein L4 [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|378973762|ref|YP_005222368.1| 50S ribosomal protein L4 [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|378981671|ref|YP_005229976.1| 50S ribosomal protein L4 [Treponema pallidum subsp. pertenue str.
CDC2]
gi|374677018|gb|AEZ57311.1| ribosomal protein L4 [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|374678088|gb|AEZ58380.1| ribosomal protein L4 [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679157|gb|AEZ59448.1| ribosomal protein L4 [Treponema pallidum subsp. pertenue str.
Gauthier]
Length = 216
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
Query: 80 RAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVV 139
R V++ A+ +++ NKR GTA T R EV G KPY QK TGRARRG ++PL GGG +
Sbjct: 29 RGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQKGTGRARRGDKKSPLLVGGGTI 88
Query: 140 FGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWG 199
FGPKPRD+ + KK KRLA+ + ++ A + V+E+F E KT++ I+ +R +
Sbjct: 89 FGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTVIEDF--TVESGKTRDLIQVLRHFA 146
Query: 200 LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K++ F++ ++++ RNI TL L+ L D+ +++ + V
Sbjct: 147 --QKERTVFILQNDDALLKRAGRNIPTLSFLSYNRLRAHDLFYGRKVLVLETAV 198
>gi|449971934|ref|ZP_21814596.1| 50S ribosomal protein L4 [Streptococcus mutans 2VS1]
gi|449171417|gb|EMB74080.1| 50S ribosomal protein L4 [Streptococcus mutans 2VS1]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE PKTKEF + +D K ++ E ++ E S+RN+ +K+ T T ++ D
Sbjct: 130 S--FEAPKTKEFATILAALNVD--SKVLVILEEGNQAAELSARNLPNVKVATAATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++++ L++T +
Sbjct: 186 IVNSDKLLVTKEAI 199
>gi|397698733|ref|YP_006536521.1| 50S ribosomal protein L4 [Enterococcus faecalis D32]
gi|397335372|gb|AFO43044.1| 50S ribosomal protein L4 [Enterococcus faecalis D32]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++ A N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSDKVAENNLVAVEGLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + S+RN+ + ++T +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLSIDTK---VLVVLENGNDFAALSARNLPNVSVVTSDNVSVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ A ++ T + +
Sbjct: 186 VVSANKVLATQTAL 199
>gi|374852404|dbj|BAL55338.1| 50S ribosomal protein L4 [uncultured Chlorobi bacterium]
Length = 216
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG +G+ L + + ++ A+ + N R+GT TR EVRGGGRKP++QK
Sbjct: 9 TGTIVGQVELPEEIFGIEPHEHAMYLAVRAYLANHRQGTHKVKTRAEVRGGGRKPWAQKG 68
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR GS R+PL GGG V GP+PRD++I++ KRLA +A++ N IVV++F
Sbjct: 69 TGRARHGSIRSPLWVGGGKVHGPRPRDYTIELPTSVKRLARKSALSLRTREGNLIVVQDF 128
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
ER KTK +E +R GL K L+ V + S+RN+ +K + ++ +
Sbjct: 129 T--LERIKTKLMVEVLRNLGL-VNLKTLILLPRVDRTLILSARNLPYVKTMLADKVSTYH 185
Query: 240 ILDAETLVLTPSTVDFLNGRYG 261
IL+ + L+L S ++ L +G
Sbjct: 186 ILEHQKLLLFQSALEPLVASFG 207
>gi|302036666|ref|YP_003796988.1| 50S ribosomal protein L4 [Candidatus Nitrospira defluvii]
gi|300604730|emb|CBK41062.1| 50S ribosomal protein L4 [Candidatus Nitrospira defluvii]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VH A++ R+GTASTL RGEV G G+KP+ QK TGRAR GS R+P+ GG VFG
Sbjct: 32 LVHEAVVMQRACDRQGTASTLRRGEVSGSGKKPWKQKHTGRARAGSLRSPVWRHGGTVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPR ++ + +K+ R A+ +A+++ A N +VV + + KTK A+ + G+
Sbjct: 92 PKPRSYAFGMPRKKYRAALQSALSAKALEGNVVVVSDLT--INQAKTKLLANALTQLGIS 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
A +V + + ++ ++ RN+ + +L P LN++D+L +L++ S ++
Sbjct: 150 --GTALLVVGDANSHLVQAGRNLSGITILRPEELNVYDVLRCHSLIIPQSELN 200
>gi|224477219|ref|YP_002634825.1| 50S ribosomal protein L4 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254803753|sp|B9DM18.1|RL4_STACT RecName: Full=50S ribosomal protein L4
gi|222421826|emb|CAL28640.1| 50S ribosomal protein L4 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + + V+ A+ + R+GT S R VRGGGRKP+
Sbjct: 6 VLKVDGSKAGSVELSDSVFAIEPNKDVIFEAINLQRASLRQGTHSVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ V
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENGFTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
V+ F E PKTKEF + + L PK+ LV+ SE NVE S+RNI +++ T
Sbjct: 126 VDAFG--LEAPKTKEFTKVLSNLEL-PKK---VLVVTESEDVNVELSARNIPGVQITTVT 179
Query: 234 TLNLFDILDAETLVLT 249
LN+ DI A+++++T
Sbjct: 180 GLNVLDITSADSVLIT 195
>gi|371776784|ref|ZP_09483106.1| 50S ribosomal protein L4 [Anaerophaga sp. HS1]
Length = 209
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 14/207 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
L +++ G++ G K PD+ + A+ D++ N R+GT R EV
Sbjct: 3 LNVVNIQGQETGR-----KVQLPDSVFGIEPNDHAIYLDVKQFLANNRQGTHKAKERSEV 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G +K QK TG AR GS ++PL GGG VFGP+PR + K+NKK K+LA +A+A
Sbjct: 58 AGSTKKIKRQKGTGTARAGSIKSPLFRGGGRVFGPRPRSYRFKLNKKLKQLARKSALAYK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTL 227
A +VVE+F E PKTKEF+ + LD K K F+ V +NV S+RNI
Sbjct: 118 AKNNAIVVVEDFT--MEAPKTKEFVNIQKNLKLDGK-KTFFVFKNVDQNVILSARNIPKC 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVD 254
++ +LN ++I++A++LVL S+V+
Sbjct: 175 QVANLASLNTYNIMNAQSLVLAESSVE 201
>gi|194246734|ref|YP_002004373.1| 50S ribosomal protein L4 [Candidatus Phytoplasma mali]
gi|254803748|sp|B3QZZ2.1|RL4_PHYMT RecName: Full=50S ribosomal protein L4
gi|193807091|emb|CAP18529.1| 50S ribosomal protein L4 [Candidatus Phytoplasma mali]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT +T R V GGG+KP+ QK TGRAR G+ R+PL GGGV FGP PRD+S+K+N+K
Sbjct: 45 RQGTHATKNRALVSGGGKKPWRQKGTGRARHGTIRSPLWRGGGVAFGPSPRDYSVKVNQK 104
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
+RLA+ A++ +N I+++ + E KTKEF + + L+ +QK L +++
Sbjct: 105 VRRLALKMALSWKINNKNLILIDNIN--LETHKTKEFQNILDQ--LNIQQKTLILTKDLN 160
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
N+ S RN+ + + T ++++ +L T++LT ++
Sbjct: 161 HNLCLSIRNLSKVLLETVSHVSVYQLLSYSTIILTKEAANYF 202
>gi|223042572|ref|ZP_03612621.1| ribosomal protein L4/L1 family [Staphylococcus capitis SK14]
gi|314934296|ref|ZP_07841655.1| ribosomal protein L4/L1 family protein [Staphylococcus caprae C87]
gi|417906311|ref|ZP_12550102.1| 50S ribosomal protein L4 [Staphylococcus capitis VCU116]
gi|222444235|gb|EEE50331.1| ribosomal protein L4/L1 family [Staphylococcus capitis SK14]
gi|313652226|gb|EFS15989.1| ribosomal protein L4/L1 family protein [Staphylococcus caprae C87]
gi|341598181|gb|EGS40698.1| 50S ribosomal protein L4 [Staphylococcus capitis VCU116]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELSDSVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ V
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQENGFTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F F+ PKTKEF + L+ +K + + NVE S+RNI +++ T + L
Sbjct: 126 VDSFG--FDAPKTKEFKNVLST--LEQPKKVLVVTEDEDVNVELSARNIPGVQVSTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI A+++V+T
Sbjct: 182 NVLDITSADSVVIT 195
>gi|116490659|ref|YP_810203.1| 50S ribosomal protein L4P [Oenococcus oeni PSU-1]
gi|290890075|ref|ZP_06553158.1| hypothetical protein AWRIB429_0548 [Oenococcus oeni AWRIB429]
gi|419758615|ref|ZP_14284930.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB304]
gi|419857026|ref|ZP_14379740.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB202]
gi|419858556|ref|ZP_14381227.1| 50S ribosomal protein L4P [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421184449|ref|ZP_15641872.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB318]
gi|421188644|ref|ZP_15645980.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB419]
gi|421190661|ref|ZP_15647957.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB422]
gi|421191370|ref|ZP_15648647.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB548]
gi|421193984|ref|ZP_15651224.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB553]
gi|421194245|ref|ZP_15651467.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB568]
gi|421197175|ref|ZP_15654355.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB576]
gi|122277157|sp|Q04G84.1|RL4_OENOB RecName: Full=50S ribosomal protein L4
gi|116091384|gb|ABJ56538.1| LSU ribosomal protein L4P [Oenococcus oeni PSU-1]
gi|290480266|gb|EFD88907.1| hypothetical protein AWRIB429_0548 [Oenococcus oeni AWRIB429]
gi|399904643|gb|EJN92096.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB304]
gi|399964817|gb|EJN99451.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB419]
gi|399967163|gb|EJO01646.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB318]
gi|399969431|gb|EJO03771.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB422]
gi|399970450|gb|EJO04743.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB553]
gi|399972193|gb|EJO06407.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB548]
gi|399975689|gb|EJO09725.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB576]
gi|399978257|gb|EJO12213.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB568]
gi|410498504|gb|EKP89954.1| 50S ribosomal protein L4P [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410498685|gb|EKP90133.1| 50S ribosomal protein L4P [Oenococcus oeni AWRIB202]
Length = 207
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L A + AVV A++ + R+GT S R V GGGRKP+ QK T
Sbjct: 11 GTQAGEVELADSIFAIEPNEAVVTDAVLMQRASLRQGTHSVKNRSTVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
G AR+GS R P GG + GP PR ++ KIN+K RLA+ + ++ +A+N ++++E +
Sbjct: 71 GNARQGSIRAPQWRGGAISMGPIPRPYAYKINRKAYRLALKSVLSDKVSAKNFVIIDELN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE+P TK +++ + L+ +K +V + +EN + S+RN+ +++ T +N++D+
Sbjct: 131 --FEKPSTKAIADSLNK--LEATKKTLLVVDDANENAKLSARNLPNVQVTTASGVNVYDL 186
Query: 241 LDAETLVLTPSTV 253
+ A+ +V+ S V
Sbjct: 187 VKAQKVVIVQSAV 199
>gi|406928806|gb|EKD64526.1| hypothetical protein ACD_50C00352G0006 [uncultured bacterium]
Length = 256
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GTA T TRGEV G RK + QK TGRAR GS + P+ GG+ FGP PRD+S+K
Sbjct: 80 LANQRKGTAETKTRGEVHGSTRKIWRQKGTGRARHGSKKAPIFVHGGIAFGPHPRDFSLK 139
Query: 151 INKKEKRLAISTAIASAAAAENTIVV---EEFDGKFERPKTKEFIEAMRRWGLDPKQKAT 207
I+KK KR A+ +A++S + V E+ D PKTK + + G+D K++
Sbjct: 140 ISKKMKRQALFSALSSKLKSNEIKAVTGLEKLD-----PKTKSMADVINNLGIDKKKRNI 194
Query: 208 FLVMEVS---ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
++ + ENV +++RN+ +++L LN +D+L+ ++L VD
Sbjct: 195 LMITPLKNDLENVYRAARNLEGVRILNANVLNTYDVLNNRLILLMDKAVD 244
>gi|303328093|ref|ZP_07358532.1| ribosomal protein L4/L1 family protein [Desulfovibrio sp. 3_1_syn3]
gi|345891281|ref|ZP_08842131.1| 50S ribosomal protein L4 [Desulfovibrio sp. 6_1_46AFAA]
gi|302861919|gb|EFL84854.1| ribosomal protein L4/L1 family protein [Desulfovibrio sp. 3_1_syn3]
gi|345048423|gb|EGW52258.1| 50S ribosomal protein L4 [Desulfovibrio sp. 6_1_46AFAA]
Length = 210
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 5/171 (2%)
Query: 90 DMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSI 149
M KR GT + TR V GGG KP+ QK TGRAR GSNR+P+ GG ++FGP PRD+
Sbjct: 40 QMAAKRAGTHNAKTRAFVSGGGVKPWKQKGTGRARSGSNRSPIWRGGAIIFGPSPRDYGF 99
Query: 150 KINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL 209
K+N K + LA+ A++S A E+ +VV+ + KTK F + GL KA +
Sbjct: 100 KVNSKVRALALKMALSSRLAGESLLVVKGIE--LPEAKTKHFAKVAGALGLG---KALIV 154
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
E +E + +S+RNI L + TP L++ D+L + LVL V+ + R+
Sbjct: 155 TPEDNEALSRSARNIPGLTLTTPDRLSVLDVLKHKQLVLLEGAVESVQARF 205
>gi|450088768|ref|ZP_21854928.1| 50S ribosomal protein L4 [Streptococcus mutans NV1996]
gi|449216262|gb|EMC16396.1| 50S ribosomal protein L4 [Streptococcus mutans NV1996]
Length = 207
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGEVTLNDAIFDIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
FE PKTKEF + +D K ++ E ++ E S+RN+ +K+ T T ++ D
Sbjct: 130 S--FEAPKTKEFATVLAALNVD--SKVLVILEEGNQAAELSARNLPNVKVATAATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++++ L++T +
Sbjct: 186 IVNSDKLLVTKEAI 199
>gi|449106696|ref|ZP_21743358.1| 50S ribosomal protein L4 [Treponema denticola ASLM]
gi|451968400|ref|ZP_21921629.1| 50S ribosomal protein L4 [Treponema denticola US-Trep]
gi|448964046|gb|EMB44719.1| 50S ribosomal protein L4 [Treponema denticola ASLM]
gi|451702916|gb|EMD57311.1| 50S ribosomal protein L4 [Treponema denticola US-Trep]
Length = 211
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ LD K V++ A+ ++ NKR GTA T R EV G KPY
Sbjct: 5 VYSVDGKELRTINLDDKVFGLPVNDDVIYYAINNELANKRVGTACTKGRAEVHGSNSKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
SQK TGRARRG ++PL GGG +FGPKPRD+S + KK KRLA+ + ++ A + +V
Sbjct: 65 SQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFSYSMPKKAKRLAMKSILSLKAQNDRLVV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F E KT++ ++ + + ++A ++ + V+++ RNI L L L
Sbjct: 125 VEDF--TVESGKTRDLVKILNNFA--KGERAVIILKDDDSLVKRAGRNIPHLSFLAYNRL 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYGVE 263
D+ +++ S L+ YG +
Sbjct: 181 RAHDLFYGRKVIMLESAAKNLSEFYGCK 208
>gi|408410516|ref|ZP_11181726.1| 50S ribosomal protein L4 [Lactobacillus sp. 66c]
gi|408410737|ref|ZP_11181938.1| 50S ribosomal protein L4 [Lactobacillus sp. 66c]
gi|407875076|emb|CCK83744.1| 50S ribosomal protein L4 [Lactobacillus sp. 66c]
gi|407875297|emb|CCK83532.1| 50S ribosomal protein L4 [Lactobacillus sp. 66c]
Length = 205
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G GE L+ + + AVV A+I KR+GT+ R VRGGG+KP+
Sbjct: 6 LMDQNGNNAGEVTLNDNVFSVEPNEAVVFDAVIRQRAGKRQGTSKVKNRSAVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGGVVFGP PR ++ + +K++RLAI + ++ +N +V
Sbjct: 66 RQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYAYSMPRKQRRLAIKSVLSQKVLDQNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ PKTK+F+ + L+ K LV+ +NV+ S++N+ +K++ L
Sbjct: 126 LDKL--TLAAPKTKDFVAILNGLKLEGK----VLVVSDDKNVQLSAKNLPKVKVVPVNGL 179
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D ++ + LVLT V
Sbjct: 180 NVEDAVNYDKLVLTQDDV 197
>gi|338706164|ref|YP_004672932.1| 50S ribosomal protein L4 [Treponema paraluiscuniculi Cuniculi A]
gi|335344225|gb|AEH40141.1| ribosomal protein L4 [Treponema paraluiscuniculi Cuniculi A]
Length = 216
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
Query: 80 RAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVV 139
R V++ A+ +++ NKR GTA T R EV G KPY QK TGRARRG ++PL GGG +
Sbjct: 29 RGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQKGTGRARRGDKKSPLLVGGGTI 88
Query: 140 FGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWG 199
FGPKPRD+ + KK KRLA+ + ++ A + V+E+F E KT++ I+ +R +
Sbjct: 89 FGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTVIEDF--TVESGKTRDLIQVLRHFA 146
Query: 200 LDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K++ F++ ++++ RNI TL L+ L D+ +++ + V
Sbjct: 147 --QKERTVFILQNDDALLKRAGRNIPTLSFLSYNRLRAHDLFYGRKVLVLETAV 198
>gi|149279663|ref|ZP_01885792.1| 50S ribosomal protein L4 [Pedobacter sp. BAL39]
gi|149229699|gb|EDM35089.1| 50S ribosomal protein L4 [Pedobacter sp. BAL39]
Length = 209
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 120/210 (57%), Gaps = 16/210 (7%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAV--VHRALITDMQ----NKRRGTASTLTRGEV 107
+ +L+ +G++ G K P++ + V A+ D++ N+R+GT + R E+
Sbjct: 3 VKVLNISGKETGA-----KVQLPESVFGITPVDHAIYLDVKQYLANQRQGTHKSKQRNEI 57
Query: 108 RGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASA 167
G RK Y QK TG AR GS ++PL GGG VFGP+PRD+S K+NKK K LA +A++
Sbjct: 58 AGSTRKLYKQKGTGGARAGSIKSPLFNGGGRVFGPQPRDYSFKLNKKLKVLARKSALSYK 117
Query: 168 AAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGT 226
A N +V+E+F F+ KTK ++ + L ++ T LV+ + N+ SSRNI
Sbjct: 118 AQDNNVVVLEDFS--FDSIKTKNYVNLVSALNLAGEK--TLLVLPSQNNNIYLSSRNIQK 173
Query: 227 LKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K++T LN +D+L+ L+LT ++ L
Sbjct: 174 AKVITADQLNTYDVLNCGKLLLTADSLKTL 203
>gi|269215704|ref|ZP_06159558.1| ribosomal protein L4/L1 family protein [Slackia exigua ATCC 700122]
gi|269131191|gb|EEZ62266.1| ribosomal protein L4/L1 family protein [Slackia exigua ATCC 700122]
Length = 207
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H+ + + R+GT ST TRG+V GGGRKP+ QK TGRAR+G+ R P GGG VFG
Sbjct: 32 VMHQVVRSQQAALRQGTHSTKTRGQVSGGGRKPWRQKGTGRARQGTIRAPHWVGGGTVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ ++N+KE +LA +A+++ A VVE FD FE P TK+ + A++ GLD
Sbjct: 92 PHPRSYAFRVNRKEVKLAERSALSAKLADGQLTVVEGFD--FEEPSTKKAVAALKALGLD 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
++ T ++ S RNI + ++ + +I+D + LVLT + ++ L
Sbjct: 150 --RRTTIVIGNDDVVTYLSFRNIPNVTVIPVADAHTLEIIDNKALVLTVAALNRL 202
>gi|408490368|ref|YP_006866737.1| LSU ribosomal protein L4p (L1e) RplD [Psychroflexus torquis ATCC
700755]
gi|408467643|gb|AFU67987.1| LSU ribosomal protein L4p (L1e) RplD [Psychroflexus torquis ATCC
700755]
Length = 209
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R E+ G RK QK TG AR GS ++P+ GGG VFG
Sbjct: 32 VVYLDVKQHLANKRQGTHKAKERAEIVGSTRKIKKQKGTGTARAGSIKSPIFRGGGRVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+ K+NKK KRLA T ++ ++VE+F FE PKTKEF+ + L+
Sbjct: 92 PRPRDYHFKLNKKLKRLARKTVLSQKLKNNQLMIVEDFG--FEAPKTKEFLNLLD--NLN 147
Query: 202 PKQKATFLVM-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ K + +V+ E ++NV SSRN+ T K++ LN ++I+++ L+++ S +D L
Sbjct: 148 IRDKKSLIVLDESNKNVYLSSRNLKTAKVVNVSELNTYNIMNSNFLLISESRLDEL 203
>gi|325299131|ref|YP_004259048.1| 50S ribosomal protein L4 [Bacteroides salanitronis DSM 18170]
gi|324318684|gb|ADY36575.1| ribosomal protein L4/L1e [Bacteroides salanitronis DSM 18170]
Length = 209
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 10/202 (4%)
Query: 56 ILSFTGEKIGETYLDLKSA----APDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+L+ GE G T + L A P+ ++ A+ M N+R+GT + R E+ G
Sbjct: 5 VLNIKGENTGRTVV-LNDAIFGITPNDH--AIYMAVKQYMANQRQGTHKSKERSEISGST 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RK QK G ARRG +PL GG VFGPKPRD+S K+NKK K LA +A++ A A
Sbjct: 62 RKLGRQKGGGGARRGDINSPLLVGGARVFGPKPRDYSFKLNKKVKLLARKSALSYKAQAN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
N +VVE+F FE PKTK+F+ + + K K ++ E ++NV S+RN+ +
Sbjct: 122 NIVVVEDFT--FETPKTKDFVNVVNNLKVAGK-KLLVVLPEANKNVYLSARNLERTNLAI 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN + +L+AETLV+T + +
Sbjct: 179 ASALNTYTVLNAETLVVTENAL 200
>gi|404486838|ref|ZP_11022026.1| 50S ribosomal protein L4 [Barnesiella intestinihominis YIT 11860]
gi|404335892|gb|EJZ62358.1| 50S ribosomal protein L4 [Barnesiella intestinihominis YIT 11860]
Length = 206
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N R+GT + R EV G RK QK TG AR G +P+ GGG VFGPKPRD+ K
Sbjct: 41 LANLRQGTHKSKERSEVSGSTRKLKRQKGTGGARSGDINSPVMVGGGRVFGPKPRDYRFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A +VVE+F F+ PKTKEF+ ++ + K K+ ++
Sbjct: 101 LNKKVKALARKSALTYKAQDNAIVVVEDFS--FDAPKTKEFVNLLKNLQVADK-KSLLVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
E ++NV SSRN+ ++T LN + +LD + LVLT STV +N
Sbjct: 158 SEQNKNVYLSSRNLTGANVITVSELNTYKVLDNKALVLTESTVAAIN 204
>gi|304384276|ref|ZP_07366687.1| ribosomal protein L4/L1 family protein [Prevotella marshii DSM
16973]
gi|304334592|gb|EFM00874.1| ribosomal protein L4/L1 family protein [Prevotella marshii DSM
16973]
Length = 209
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 4/204 (1%)
Query: 56 ILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKP 114
+L+ G++ G + L+ A + V++ A+ + N+R+GTA T R E+ G RK
Sbjct: 5 VLNINGQETGRKVTLNESIFAIEPNDHVLYLAVKQYLANQRQGTAKTKERSEMSGSTRKL 64
Query: 115 YSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI 174
QK G ARRG +PL GG VFGPKPRD+ K+N+K K LA +A++ A I
Sbjct: 65 GRQKGGGGARRGDINSPLLVGGARVFGPKPRDYGFKLNRKVKVLARKSALSYKAQENAII 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
VVE+FD E PKTK+FI + +D ++ L E ++NV S+RN+ ++++ T
Sbjct: 125 VVEDFD--IETPKTKDFINITKNLNVDGRKLLLVLPKE-NKNVYLSARNLQRSEVMSAST 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNG 258
LN + IL+A+ LV+T +++ ++G
Sbjct: 182 LNSYKILNADVLVVTENSLKVIDG 205
>gi|104773543|ref|YP_618523.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513540|ref|YP_812446.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815139|ref|YP_005851530.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|122275690|sp|Q04C14.1|RL4_LACDB RecName: Full=50S ribosomal protein L4
gi|122397384|sp|Q1GBL7.1|RL4_LACDA RecName: Full=50S ribosomal protein L4
gi|103422624|emb|CAI97232.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092855|gb|ABJ58008.1| LSU ribosomal protein L4P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125176|gb|ADY84506.1| 50S ribosomal protein L4 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 205
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 114/198 (57%), Gaps = 6/198 (3%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
++ G GE L+ + + AVV A+I KR+GT+ R VRGGG+KP+
Sbjct: 6 LMDQNGNNAGEVTLNDNVFSVEPNEAVVFDAIIRQRAGKRQGTSKVKNRSAVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGGVVFGP PR ++ + +K++RLAI + ++ +N +V
Sbjct: 66 RQKGTGRARQGSIRAPQWRGGGVVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLLDQNLVV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+++ + PKT++F+ + L+ K LV+ +NV+ S++N+ +K++ L
Sbjct: 126 LDKL--TMDAPKTRDFVAILNGLKLEGK----VLVVSDDKNVQLSAKNLPKVKVVPVNGL 179
Query: 236 NLFDILDAETLVLTPSTV 253
N+ D ++ + LVLT V
Sbjct: 180 NVEDAVNYDKLVLTQDDV 197
>gi|218249414|ref|YP_002374989.1| ribosomal protein L4/L1 family protein [Borrelia burgdorferi ZS7]
gi|224532481|ref|ZP_03673106.1| 50S ribosomal protein L4 [Borrelia burgdorferi WI91-23]
gi|226321789|ref|ZP_03797315.1| 50S ribosomal protein L4 [Borrelia burgdorferi Bol26]
gi|226730622|sp|B7J244.1|RL4_BORBZ RecName: Full=50S ribosomal protein L4
gi|218164602|gb|ACK74663.1| ribosomal protein L4/L1 family protein [Borrelia burgdorferi ZS7]
gi|224512553|gb|EEF82929.1| 50S ribosomal protein L4 [Borrelia burgdorferi WI91-23]
gi|226232978|gb|EEH31731.1| 50S ribosomal protein L4 [Borrelia burgdorferi Bol26]
Length = 209
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK K+LA + ++ AA EN+
Sbjct: 65 KQKGTGRARVGTKRNPVWIGGGIALGPKPRDYSYRLPKKVKKLAFKSVLSLRAADENSFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFS--VESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|441516755|ref|ZP_20998500.1| 50S ribosomal protein L4 [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441456376|dbj|GAC56461.1| 50S ribosomal protein L4 [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 219
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 13/179 (7%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A++H+ ++ R+GT ST TRGEVRGGG KPY QK TGRAR+GS R+P GGG V
Sbjct: 38 ALMHQVVVAQQAAGRQGTHSTKTRGEVRGGGVKPYRQKGTGRARQGSIRSPQFVGGGTVH 97
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKE---FIEAMRR 197
GP+PRD+S K+NKK K A+ A++ A E VV E + + P TK F+E +
Sbjct: 98 GPQPRDYSQKVNKKMKAAALRGALSDRARNERIHVVTEL-VQGQSPSTKSARTFLEQI-- 154
Query: 198 WGLDPKQKATFLVMEVSEN--VEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ FLV+ E+ KS N+ + + P LN +D+LDA+ +V + T++
Sbjct: 155 -----SDRRKFLVVLSREDDAARKSIANLQNVHAIAPDQLNTYDVLDADEIVFSVETLN 208
>gi|242371895|ref|ZP_04817469.1| 50S ribosomal protein L4 [Staphylococcus epidermidis M23864:W1]
gi|242350402|gb|EES42003.1| 50S ribosomal protein L4 [Staphylococcus epidermidis M23864:W1]
Length = 207
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + +V+ A+ + R+GT S R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELSDAVFAIEPNNSVLFEAINLQRASLRQGTHSVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A++ + V
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSFKVQEKGFTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F F+ PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FDAPKTKEFKNVLTT--LEQPKKVLVVTEGEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI A+++V+T
Sbjct: 182 NVLDITSADSVVIT 195
>gi|333029382|ref|ZP_08457443.1| ribosomal protein L4/L1e [Bacteroides coprosuis DSM 18011]
gi|332739979|gb|EGJ70461.1| ribosomal protein L4/L1e [Bacteroides coprosuis DSM 18011]
Length = 208
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
M NKR+GT T R E+ G G+K QK G ARRG ++PL GGG FGP PRD+S K
Sbjct: 41 MANKRQGTHKTKERNEITGSGKKLGRQKGGGGARRGDIKSPLLVGGGRAFGPTPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A A +VVE+F FE PKTKEFI + + K K ++
Sbjct: 101 LNKKTKSLARKSALTYKAQANAIVVVEDF--AFEAPKTKEFISIAKNLKVSDK-KLLMIL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
E ++NV S+RNI + T LN + +L A LVLT S +
Sbjct: 158 SESNKNVYLSARNIEGTTVDTVSHLNTYGVLGAGVLVLTESAL 200
>gi|381181199|ref|ZP_09890034.1| LSU ribosomal protein L4P [Treponema saccharophilum DSM 2985]
gi|380766866|gb|EIC00870.1| LSU ribosomal protein L4P [Treponema saccharophilum DSM 2985]
Length = 212
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ LD V++ A+ ++ NKR GTA T TR EV G KPY
Sbjct: 5 VYSIDGKELRSITLDDNVFGLPVNEDVIYYAITNELANKRVGTACTKTRSEVHGSNAKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TG ARRG ++P+ GGG +FGPKPRD+S I K KRLA+ + ++ A A+ V
Sbjct: 65 KQKGTGHARRGDKKSPITRGGGTIFGPKPRDFSYSIPKTAKRLAMKSILSLQAQADRLTV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F E KTK+ ++ + + D ++ ++ + +N++++ RN+ L L+ L
Sbjct: 125 VEDF--TIESGKTKDLVKILNAFAKD--ERTVIILKDDDKNIKRAGRNVKNLSFLSYNRL 180
Query: 236 NLFDILDAETLVL 248
D+ ++L
Sbjct: 181 RAHDLYYGRKVIL 193
>gi|42526280|ref|NP_971378.1| 50S ribosomal protein L4 [Treponema denticola ATCC 35405]
gi|422342608|ref|ZP_16423547.1| 50S ribosomal protein L4 [Treponema denticola F0402]
gi|449103286|ref|ZP_21740032.1| 50S ribosomal protein L4 [Treponema denticola AL-2]
gi|449110088|ref|ZP_21746720.1| 50S ribosomal protein L4 [Treponema denticola ATCC 33520]
gi|449112587|ref|ZP_21749141.1| 50S ribosomal protein L4 [Treponema denticola ATCC 33521]
gi|449115191|ref|ZP_21751656.1| 50S ribosomal protein L4 [Treponema denticola ATCC 35404]
gi|449117757|ref|ZP_21754172.1| 50S ribosomal protein L4 [Treponema denticola H-22]
gi|449120846|ref|ZP_21757228.1| 50S ribosomal protein L4 [Treponema denticola H1-T]
gi|449123250|ref|ZP_21759580.1| 50S ribosomal protein L4 [Treponema denticola MYR-T]
gi|449125539|ref|ZP_21761841.1| 50S ribosomal protein L4 [Treponema denticola OTK]
gi|449130553|ref|ZP_21766773.1| 50S ribosomal protein L4 [Treponema denticola SP37]
gi|46577160|sp|P61070.1|RL4_TREDE RecName: Full=50S ribosomal protein L4
gi|41816392|gb|AAS11259.1| ribosomal protein L4 [Treponema denticola ATCC 35405]
gi|325473224|gb|EGC76419.1| 50S ribosomal protein L4 [Treponema denticola F0402]
gi|448939508|gb|EMB20425.1| 50S ribosomal protein L4 [Treponema denticola OTK]
gi|448942274|gb|EMB23169.1| 50S ribosomal protein L4 [Treponema denticola SP37]
gi|448946770|gb|EMB27624.1| 50S ribosomal protein L4 [Treponema denticola MYR-T]
gi|448946844|gb|EMB27696.1| 50S ribosomal protein L4 [Treponema denticola H1-T]
gi|448949648|gb|EMB30472.1| 50S ribosomal protein L4 [Treponema denticola H-22]
gi|448953543|gb|EMB34333.1| 50S ribosomal protein L4 [Treponema denticola ATCC 35404]
gi|448956049|gb|EMB36813.1| 50S ribosomal protein L4 [Treponema denticola ATCC 33521]
gi|448957796|gb|EMB38536.1| 50S ribosomal protein L4 [Treponema denticola ATCC 33520]
gi|448965138|gb|EMB45803.1| 50S ribosomal protein L4 [Treponema denticola AL-2]
Length = 211
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ LD K V++ A+ ++ NKR GTA T R EV G KPY
Sbjct: 5 VYSVDGKELRTINLDDKVFGLPVNDDVIYYAINNELANKRVGTACTKGRAEVHGSNSKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
SQK TGRARRG ++PL GGG +FGPKPRD+S + KK KRLA+ + ++ A + +V
Sbjct: 65 SQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFSYSMPKKAKRLAMKSILSLKAQNDRLVV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F E KT++ ++ + + ++A ++ + V+++ RNI L L L
Sbjct: 125 VEDF--TVESGKTRDLVKILDNFA--KGERAVIILKDDDSLVKRAGRNIPHLSFLAYNRL 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYGVE 263
D+ +++ S L+ YG +
Sbjct: 181 RAHDLFYGRKVIMLESAAKNLSEFYGCK 208
>gi|222056704|ref|YP_002539066.1| 50S ribosomal protein L4 [Geobacter daltonii FRC-32]
gi|254803736|sp|B9M6U4.1|RL4_GEOSF RecName: Full=50S ribosomal protein L4
gi|221565993|gb|ACM21965.1| ribosomal protein L4/L1e [Geobacter daltonii FRC-32]
Length = 207
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L + + + +K+GE L + ++H A+ + N+R GT + R V G G
Sbjct: 2 AKLDVYNTSHKKVGEIELSDAVFNDEVREYLIHEAVKIQLANRRAGTVAVKNRAAVSGSG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TG+AR+G R P PGGGV FGP+P+ +++ +NKK +R A+ +A++ +
Sbjct: 62 KKPFKQKGTGQARQGCKRAPQYPGGGVAFGPQPKTYNLSMNKKARRAALRSALSLLFKND 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
V++ + + TK F+ ++ + LD KA + + N+E S+RNI +K+L
Sbjct: 122 KLTVLDAIN--LDTVSTKNFVGVLKGFSLD---KALVVTDAENRNLELSARNIKNVKVLK 176
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
LN+FD++ + ++ T ++V
Sbjct: 177 TEGLNIFDLMKYQRVIFTENSV 198
>gi|383775774|ref|YP_005460340.1| 50S ribosomal protein L4 [Actinoplanes missouriensis 431]
gi|381369006|dbj|BAL85824.1| putative ribosomal protein L4 [Actinoplanes missouriensis 431]
Length = 216
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 120/223 (53%), Gaps = 16/223 (7%)
Query: 52 SPLPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGE 106
S + +++ G K G L D+++ P ++H+ ++ + R+GTA TRGE
Sbjct: 2 SSVDVINAEGNKAGSVELPSNVFDVQANIP-----LMHQVVVAQLAAARQGTAKAKTRGE 56
Query: 107 VRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIAS 166
V GGG+KPY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ +A++
Sbjct: 57 VAGGGKKPYKQKGTGRARQGSIRAPQFTGGGVVHGPVPRDYSQRTPKKMKAAALRSALSD 116
Query: 167 AAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSS-RNIG 225
A VVE F E+P TK + A+R+ K +V++ + + S RN
Sbjct: 117 RARDGRVFVVESFV-TGEKPSTKAAVTALRKVAQTTK---VLVVLDSQDELNWVSLRNEP 172
Query: 226 TLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEGD 267
T+ ++ LN +D+L A+ +V T +D FL G EGD
Sbjct: 173 TVHLIEAGQLNTYDVLVADEVVFTKVALDEFLGGSAETSEEGD 215
>gi|116748991|ref|YP_845678.1| 50S ribosomal protein L4 [Syntrophobacter fumaroxidans MPOB]
gi|166199918|sp|A0LIJ1.1|RL4_SYNFM RecName: Full=50S ribosomal protein L4
gi|116698055|gb|ABK17243.1| LSU ribosomal protein L4P [Syntrophobacter fumaroxidans MPOB]
Length = 207
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 107/172 (62%), Gaps = 5/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H ++ + +R GT T R +V GGG+KP+ QK TGRAR G++R+P+ GGG + G
Sbjct: 32 VLHEVVLYQLAKRRAGTVKTKGRSDVAGGGKKPWRQKGTGRARAGTSRSPIWRGGGTIHG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+ ++I KK +RLA+ A++ V+++ + E+ KT++F + R+ L
Sbjct: 92 PQPRDYEMRIPKKVRRLAVKMALSQKLIDRELTVLDQL--QLEQIKTRDFAAILDRFELS 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K ++ + E ++KS+RNI +K+L LN++D+L+ +++LT T+
Sbjct: 150 ---KTLVVIAQPDEKLQKSARNIPNVKVLRTEGLNVYDLLNHRSVLLTRETI 198
>gi|366052601|ref|ZP_09450323.1| 50S ribosomal protein L4 [Lactobacillus suebicus KCTC 3549]
Length = 208
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 106/172 (61%), Gaps = 6/172 (3%)
Query: 83 VHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGP 142
++ A++ + R+GT + R V GGG+KP+ QK TGRAR+GS R+P GGG+VFGP
Sbjct: 34 IYDAVLRQRASLRQGTHAVKNRSAVSGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFGP 93
Query: 143 KPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDP 202
PR +S K+ +K ++LAI +A++ A + +VV+ F++PKTKEF + +
Sbjct: 94 TPRSYSFKLPRKVRQLAIKSALSEKVADDKLVVVDSI--SFDKPKTKEFTAVLANLKVAE 151
Query: 203 KQKATFLVMEV-SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K T LV++ +ENV S+RNI + + +N+ D+++ + LV+T S +
Sbjct: 152 K---TLLVLDKDNENVALSARNIANVTVTNAANVNILDVVNNDKLVITQSAL 200
>gi|148263141|ref|YP_001229847.1| 50S ribosomal protein L4 [Geobacter uraniireducens Rf4]
gi|189029505|sp|A5GAW6.1|RL4_GEOUR RecName: Full=50S ribosomal protein L4
gi|146396641|gb|ABQ25274.1| LSU ribosomal protein L4P [Geobacter uraniireducens Rf4]
Length = 207
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 7/203 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ L + +K+GE L + ++H A+ + N+R GT R V G G
Sbjct: 2 AKLDVFDIKNKKVGEIELSDSVFNDEVKEYLIHEAVKIQLANRRAGTVGVKNRSAVAGSG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KP+ QK TG+AR+G R P PGGGV FGP+ + +++ +NKK +R A+ +A++
Sbjct: 62 KKPFKQKGTGQARQGCRRAPQYPGGGVAFGPQAKTYNLSMNKKARRAAMRSALSLLFKNN 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV-SENVEKSSRNIGTLKML 230
V+ D + TK F+ + + LD T +V +V + N+E S+RN+ +K+L
Sbjct: 122 KLTVLNNID--LDNVSTKNFVGILNGFTLDK----TLVVTDVENRNLELSARNVKNVKVL 175
Query: 231 TPRTLNLFDILDAETLVLTPSTV 253
LN+FDI+ ++++ T ++V
Sbjct: 176 KSEGLNIFDIMKYQSVIFTENSV 198
>gi|429740582|ref|ZP_19274266.1| 50S ribosomal protein L4 [Porphyromonas catoniae F0037]
gi|429160790|gb|EKY03240.1| 50S ribosomal protein L4 [Porphyromonas catoniae F0037]
Length = 209
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 98/167 (58%), Gaps = 3/167 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK QK G ARRG +P+ GGG VFGP PRD+S K
Sbjct: 41 LANQRQGTHKSKERSEISGSTRKLIRQKGGGGARRGDINSPVLVGGGRVFGPTPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A + IV+E F+ PKTK+FI + K KA F+V
Sbjct: 101 LNKKVKALARRSALTYKAQKQEIIVIENFE--LAAPKTKDFIALSEALQVADK-KALFVV 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
+S+N+ SSRNI T +++ LN + +LD + LVLT + V +N
Sbjct: 158 ETLSDNLVLSSRNIRTARVMNAFQLNTYSVLDCKKLVLTEAAVAVIN 204
>gi|189460685|ref|ZP_03009470.1| hypothetical protein BACCOP_01332 [Bacteroides coprocola DSM 17136]
gi|189432644|gb|EDV01629.1| 50S ribosomal protein L4 [Bacteroides coprocola DSM 17136]
Length = 209
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
M N+R+GT + R E+ G RK QK G ARRG +PL GG VFGPKPRD+ K
Sbjct: 41 MANQRQGTHKSKERSEISGSTRKLGRQKGGGGARRGDINSPLLVGGARVFGPKPRDYWFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+A A A N +VVE+F FE PKTKEF+ + + K K ++
Sbjct: 101 LNKKVKTLARKSALAYKAQANNIVVVEDFT--FEAPKTKEFVNVVNNLKVAGK-KLLMVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
E ++NV S+RN+ + LN + +L+AETLV+T S +
Sbjct: 158 PEANKNVYLSARNLERTNLAIASALNTYSVLNAETLVVTESAL 200
>gi|85057801|ref|YP_456717.1| 50S ribosomal protein L4 [Aster yellows witches'-broom phytoplasma
AYWB]
gi|109893576|sp|Q2NIV5.1|RL4_AYWBP RecName: Full=50S ribosomal protein L4
gi|84789906|gb|ABC65638.1| LSU ribosomal protein L1E [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 207
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT +T TR V GGG+KP+ QK TGRAR GS R+PL GGGV FGP PR++S+K+N+K
Sbjct: 45 RQGTHATKTRALVAGGGKKPWRQKGTGRARHGSIRSPLWRGGGVTFGPSPRNYSVKVNQK 104
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
+ LA+ +A++ +V++ + KTK+F + +++ L+ K+ +V +++
Sbjct: 105 VRILALKSALSLQVQNNQLVVLDNIN--LATHKTKDFQQMLQK--LNITSKSLIVVTQMT 160
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
E + +SRN+ + + T +++ IL+ + LVLT V++
Sbjct: 161 EQLALASRNLSYITLETASHASVYQILNCKQLVLTADAVNYF 202
>gi|44210|emb|CAA29705.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 208
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 108/197 (54%), Gaps = 4/197 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G +I E L+ + + ++ +I+ R+GT TR EV GGGRK
Sbjct: 3 LQVLDTKGNEIKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR-DWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TG AR+GS R P GG V FGP P ++ +NKK + LA + ++ N
Sbjct: 63 PWKQKGTGLARQGSIRAPQWKGGEVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKENN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++V++FD F +P TKE + M+ +D QK + E E V KSS NI +K ++
Sbjct: 123 LVIVDKFD--FAKPSTKEMVVVMKNLKIDD-QKTLIVTKEKEELVVKSSNNITGVKTISA 179
Query: 233 RTLNLFDILDAETLVLT 249
LN+FD+L+A L++T
Sbjct: 180 NQLNVFDLLNATKLLIT 196
>gi|282880999|ref|ZP_06289690.1| ribosomal protein L4/L1 family protein [Prevotella timonensis CRIS
5C-B1]
gi|281305222|gb|EFA97291.1| ribosomal protein L4/L1 family protein [Prevotella timonensis CRIS
5C-B1]
Length = 209
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GTA T R E+ G RK QK G ARRG +P+ GG VFGPKPRD+ K
Sbjct: 41 LANQRQGTAKTKERSELSGSTRKLGRQKGGGGARRGDINSPVLVGGARVFGPKPRDYGFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K+LA +A++ A + +VVE+F+ + PKTK+F+ + +D ++ T LV
Sbjct: 101 LNKKVKQLARKSALSYKAQENSILVVEDFN--LDAPKTKDFVNIAKNLKVDGRK--TLLV 156
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ EV++NV S+RN+ +++T TLN + +L+A+ L++T +++
Sbjct: 157 LPEVNKNVYLSARNLQQAEVMTASTLNTYKVLNADVLIMTENSL 200
>gi|449127403|ref|ZP_21763676.1| 50S ribosomal protein L4 [Treponema denticola SP33]
gi|448944136|gb|EMB25017.1| 50S ribosomal protein L4 [Treponema denticola SP33]
Length = 211
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G+++ LD K V++ A+ ++ NKR GTA T R EV G KPY
Sbjct: 5 VYSVDGKELRTINLDDKVFGLPVNDDVIYYAINNELANKRVGTACTKGRAEVHGSNAKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
SQK TGRARRG ++PL GGG +FGPKPRD+S + KK KRLA+ + ++ A + +V
Sbjct: 65 SQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFSYSMPKKAKRLAMKSILSLKAQNDRLVV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
VE+F E KT++ ++ + + ++A ++ + V+++ RNI L L L
Sbjct: 125 VEDF--TVESGKTRDLVKILDNFA--KGERAVIILKDDDSLVKRAGRNIPHLSFLAYNRL 180
Query: 236 NLFDILDAETLVLTPSTVDFLNGRYGVE 263
D+ +++ S L+ YG +
Sbjct: 181 RAHDLFYGRKVIMLESAAKNLSEFYGCK 208
>gi|206901882|ref|YP_002250702.1| ribosomal protein L4/L1 family [Dictyoglomus thermophilum H-6-12]
gi|206740985|gb|ACI20043.1| ribosomal protein L4/L1 family [Dictyoglomus thermophilum H-6-12]
Length = 209
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 3/203 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + EK+GE L + + + + ++ + N R+GT ST RGEV GRK
Sbjct: 4 VPVYNQKAEKVGEIELKEELFGVEKRPDLFYTCVVMHLANGRQGTHSTKRRGEVNRSGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
+ QK TG AR+G + P GGG FGPKPRD+S KI KK +RLAI +A+++
Sbjct: 64 VWPQKGTGHARQGDRKAPHWVGGGRPFGPKPRDYSYKIPKKMRRLAIRSALSTKLQENAL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I++++ + +PKTKE + + +GL K V EN+++++ N+ +K +
Sbjct: 124 IILDKIE--LSQPKTKELVNILNNFGL-ADSKVLIGVPAKDENLKRAAMNLEKVKTMIAS 180
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
LN++D+L + L+LT + L
Sbjct: 181 VLNVYDLLKYDYLILTVDAIPVL 203
>gi|441496867|ref|ZP_20979093.1| LSU ribosomal protein L4p (L1e) [Fulvivirga imtechensis AK7]
gi|441439340|gb|ELR72658.1| LSU ribosomal protein L4p (L1e) [Fulvivirga imtechensis AK7]
Length = 209
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R EV G RK QK TG AR GS ++P+ GGG VFGP PRD+S K
Sbjct: 41 LANQRQGTHKSKERAEVSGSTRKIKRQKGTGTARAGSIKSPVFRGGGRVFGPTPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A ++ +VE+F E PKTK++++ + L K+ T LV
Sbjct: 101 LNKKLKELARRSALTYKAIDKSIAIVEDFS--LEAPKTKDYLKMLNALSLGDKK--TLLV 156
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ + ++NV S RN+ K++T +LN +D+L+A+ L+L+ S+V+
Sbjct: 157 LADNNKNVVLSGRNVQNTKVVTADSLNTYDVLNADNLILSESSVE 201
>gi|409349516|ref|ZP_11232951.1| 50S ribosomal protein L4 [Lactobacillus equicursoris CIP 110162]
gi|407878079|emb|CCK85009.1| 50S ribosomal protein L4 [Lactobacillus equicursoris CIP 110162]
Length = 199
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G GE L+ + + AVV A+I KR+GT+ R VRGGG+KP+ QK
Sbjct: 4 NGNNAGEVTLNDNVFSVEPNEAVVFDAVIRQRAGKRQGTSKVKNRSAVRGGGKKPWRQKG 63
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR ++ + +K++RLAI + ++ +N +V+++
Sbjct: 64 TGRARQGSIRAPQWRGGGVVFGPTPRSYAYSMPRKQRRLAIKSVLSQKVLDQNLVVLDKL 123
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
PKTK+F+ + L+ K LV+ +NV+ S++N+ +K++ LN+ D
Sbjct: 124 --TLAAPKTKDFVAILNGLKLEGK----VLVVSDDKNVQLSAKNLPKVKVVPVNGLNVED 177
Query: 240 ILDAETLVLTPSTV 253
++ + LVLT V
Sbjct: 178 AVNYDKLVLTQDDV 191
>gi|15639183|ref|NP_218629.1| 50S ribosomal protein L4 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025423|ref|YP_001933195.1| 50S ribosomal protein L4 [Treponema pallidum subsp. pallidum SS14]
gi|378974824|ref|YP_005223432.1| 50S ribosomal protein L4 [Treponema pallidum subsp. pallidum DAL-1]
gi|384421731|ref|YP_005631090.1| 50S ribosomal protein L4/L1 family [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502086|ref|YP_006869530.1| ribosomal protein L4 [Treponema pallidum subsp. pallidum str.
Mexico A]
gi|6094081|sp|O83220.1|RL4_TREPA RecName: Full=50S ribosomal protein L4
gi|226731440|sp|B2S2D7.1|RL4_TREPS RecName: Full=50S ribosomal protein L4
gi|3322454|gb|AAC65175.1| ribosomal protein L4 (rplD) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017998|gb|ACD70616.1| ribosomal protein L4 [Treponema pallidum subsp. pallidum SS14]
gi|291059597|gb|ADD72332.1| ribosomal protein L4/L1 family [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374680222|gb|AEZ60512.1| ribosomal protein L4 [Treponema pallidum subsp. pallidum DAL-1]
gi|408475449|gb|AFU66214.1| ribosomal protein L4 [Treponema pallidum subsp. pallidum str.
Mexico A]
Length = 216
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G + LD R V++ A+ +++ NKR GTA T R EV G KPY
Sbjct: 5 VYSVEGVALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPY 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRARRG ++PL GGG +FGPKPRD+ + KK KRLA+ + ++ A + V
Sbjct: 65 KQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTV 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+E+F E KT++ I+ +R + +++ F++ ++++ RNI TL L+ L
Sbjct: 125 IEDF--TVESGKTRDLIQVLRHFA--QRERTVFILQNDDALLKRAGRNIPTLSFLSYNRL 180
Query: 236 NLFDILDAETLVLTPSTV 253
D+ +++ + V
Sbjct: 181 RAHDLFYGRKVLVLETAV 198
>gi|408790026|ref|ZP_11201660.1| LSU ribosomal protein L4p (L1e) [Lactobacillus florum 2F]
gi|408520765|gb|EKK20799.1| LSU ribosomal protein L4p (L1e) [Lactobacillus florum 2F]
Length = 207
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 109/175 (62%), Gaps = 4/175 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV ++ ++R+GT T +RG+VRGGG+KP+ QK TGRAR+GS R+P GGGVVFG
Sbjct: 32 VVFDTVLMQQASQRQGTNGTKSRGQVRGGGKKPWRQKGTGRARQGSIRSPQWVGGGVVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P R ++ + KK RLA+ + ++ A + +VV+ F++P+TK F + LD
Sbjct: 92 PSARSYAYHLPKKVTRLAVKSVLSEKVANGDLVVVDSL--SFDQPQTKAFASLLAS--LD 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K ++ + ++N +S+RN+ +++++ + +N D+L+++ +V+T + + L
Sbjct: 148 AATKTLVVLEDGNDNAARSARNLDRVQVISGKGVNTLDVLNSQKVVITKAALSQL 202
>gi|379796571|ref|YP_005326572.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356873564|emb|CCE59903.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 207
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAIHLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|328955913|ref|YP_004373246.1| 50S ribosomal protein L4 [Coriobacterium glomerans PW2]
gi|328456237|gb|AEB07431.1| LSU ribosomal protein L4P [Coriobacterium glomerans PW2]
Length = 208
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 4/202 (1%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + + + G K+ ET L + ++H + M RRGT ST +RGEVRGGG
Sbjct: 2 SKIEVKNAEGSKVTETELASAVYGIEPNIHIMHHIVKCQMACWRRGTQSTKSRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R GGV+FGPKPR ++ ++N KE +LA+ +A+++ +
Sbjct: 62 RKPWRQKGTGRARQGSIRAGQWRHGGVIFGPKPRSYAKRMNNKEVKLAMRSALSAKLRDD 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLT 231
+VV+++ F++P TK + +R L+ K + T +V E N S RNI ++T
Sbjct: 122 ELVVVDDYG--FDKPSTKAAMRLIRSLELEGK-RLTIIVREDDVNAYLSFRNIPRTFIIT 178
Query: 232 PRTLNLFDILDAETLVLTPSTV 253
P N D+++ L L P+ V
Sbjct: 179 PNEANTHDLVNNGAL-LMPADV 199
>gi|450143943|ref|ZP_21873723.1| 50S ribosomal protein L4 [Streptococcus mutans 1ID3]
gi|450174745|ref|ZP_21884776.1| 50S ribosomal protein L4 [Streptococcus mutans SM1]
gi|449151422|gb|EMB55160.1| 50S ribosomal protein L4 [Streptococcus mutans 1ID3]
gi|449248201|gb|EMC46462.1| 50S ribosomal protein L4 [Streptococcus mutans SM1]
Length = 207
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +VV +I+ N R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEAGEVTLNDAIFGIEPNESVVFDVIISQRANLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR + K+ +K +RLA+ + ++ A E + V+
Sbjct: 70 TGRARQGSIRAPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVADEKFVAVDAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLF 238
FE PKTKEF + +D K +++E K S+RN+ +K+ T T ++
Sbjct: 130 S--FEAPKTKEFATVLAALNVDSK---VLVILEEGNQAAKLSARNLPNVKVATAATASVL 184
Query: 239 DILDAETLVLTPSTV 253
DI++++ L++T +
Sbjct: 185 DIVNSDKLLVTKEAI 199
>gi|302536252|ref|ZP_07288594.1| 50S ribosomal protein L4 [Streptomyces sp. C]
gi|302445147|gb|EFL16963.1| 50S ribosomal protein L4 [Streptomyces sp. C]
Length = 216
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 7/218 (3%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + ILS G+K G L + T+ ++H+ ++ + R+GT T TRGEVRGGG
Sbjct: 2 STIDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KPY QK TGRAR+GS R P GGGVV GP+PRD+S + KK K A+ A++ A
Sbjct: 62 KKPYRQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARHS 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVE-KSSRNIGTLKML 230
VV G E + + + + +G ++K LV E S+ + S+RN+ + +L
Sbjct: 122 RIHVVT---GVVEGAASTKAAKTL--FGKISERKNLLLVAERSDELAWLSARNLPQVHIL 176
Query: 231 TPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEGD 267
P LN +D++ ++ +V T + ++ F++G E EG+
Sbjct: 177 EPGQLNTYDVIVSDDVVFTQAALESFVSGPKADETEGN 214
>gi|377832280|ref|ZP_09815242.1| ribosomal protein L4/L1 [Lactobacillus mucosae LM1]
gi|377553916|gb|EHT15633.1| ribosomal protein L4/L1 [Lactobacillus mucosae LM1]
Length = 164
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT + R VRGGG+KP+ QK TGRAR+GS R P GGG+VFGP PR ++ + +K
Sbjct: 2 RQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRAPQFRGGGIVFGPTPRSYNFNLPRK 61
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
++LAI +A++ A E +VVE + F+ PKTKEF M L +K +V +
Sbjct: 62 VRQLAIKSALSQKVADEKFVVVESIN--FDAPKTKEFASVMN--NLKVSEKVLVVVSDED 117
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+N S RN+ ++TP +N+ +++D++ +V+T S +
Sbjct: 118 KNAALSGRNLVNTTVVTPAGVNILNVVDSQKIVITKSAL 156
>gi|420198155|ref|ZP_14703872.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM020]
gi|394264889|gb|EJE09558.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM020]
Length = 207
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIELNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|49484465|ref|YP_041689.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257423734|ref|ZP_05600163.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426412|ref|ZP_05602814.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429051|ref|ZP_05605438.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
68-397]
gi|257434658|ref|ZP_05610709.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M876]
gi|282902152|ref|ZP_06310045.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus C160]
gi|282906592|ref|ZP_06314440.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909562|ref|ZP_06317373.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911809|ref|ZP_06319605.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915098|ref|ZP_06322875.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M899]
gi|282920824|ref|ZP_06328542.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C427]
gi|282925729|ref|ZP_06333377.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C101]
gi|283959027|ref|ZP_06376468.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293497502|ref|ZP_06665356.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
58-424]
gi|293511077|ref|ZP_06669774.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M809]
gi|293549683|ref|ZP_06672355.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M1015]
gi|295428832|ref|ZP_06821456.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297589682|ref|ZP_06948323.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MN8]
gi|384866835|ref|YP_005747031.1| 50S ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415684499|ref|ZP_11449608.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS00]
gi|417888305|ref|ZP_12532419.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21195]
gi|418564038|ref|ZP_13128463.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21264]
gi|418580210|ref|ZP_13144296.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418595662|ref|ZP_13159260.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21342]
gi|418601385|ref|ZP_13164821.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21345]
gi|418890049|ref|ZP_13444175.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418895900|ref|ZP_13449978.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418898837|ref|ZP_13452901.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418907220|ref|ZP_13461238.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG149]
gi|418915376|ref|ZP_13469341.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418921117|ref|ZP_13475041.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418983198|ref|ZP_13530900.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418984026|ref|ZP_13531721.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|56749402|sp|Q6GEI4.1|RL4_STAAR RecName: Full=50S ribosomal protein L4
gi|49242594|emb|CAG41315.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272752|gb|EEV04854.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276043|gb|EEV07494.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279532|gb|EEV10119.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
68-397]
gi|257285254|gb|EEV15370.1| LSU ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M876]
gi|282312558|gb|EFB42962.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C101]
gi|282315239|gb|EFB45623.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
C427]
gi|282320819|gb|EFB51153.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M899]
gi|282323505|gb|EFB53821.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326541|gb|EFB56843.1| ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329491|gb|EFB59012.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596611|gb|EFC01570.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus C160]
gi|283788619|gb|EFC27446.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290918730|gb|EFD95806.1| ribosomal protein L4 [Staphylococcus aureus subsp. aureus M1015]
gi|291096433|gb|EFE26691.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
58-424]
gi|291466064|gb|EFF08593.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
M809]
gi|295127181|gb|EFG56823.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297578193|gb|EFH96906.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus MN8]
gi|312437340|gb|ADQ76411.1| ribosomal protein L4/L1 family protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193501|gb|EFU23897.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CGS00]
gi|341856138|gb|EGS96981.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21195]
gi|371977138|gb|EHO94416.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21264]
gi|374398851|gb|EHQ70005.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21345]
gi|374400763|gb|EHQ71869.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
21342]
gi|377702076|gb|EHT26401.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377707622|gb|EHT31914.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377709625|gb|EHT33877.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377713402|gb|EHT37610.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377737220|gb|EHT61230.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377739240|gb|EHT63246.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377753203|gb|EHT77120.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377760050|gb|EHT83929.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIG149]
gi|377763769|gb|EHT87623.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 207
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLST--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|311029050|ref|ZP_07707140.1| 50S ribosomal protein L4 [Bacillus sp. m3-13]
Length = 207
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G +GE L + +V+ A++ + R+GTA R EV GGGRKP+ QK T
Sbjct: 11 GANVGEVELADAVFGIEPNNSVLFDAIVMQRASLRQGTAKVKGRSEVAGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR +S K+ KK +RLAI +A++S +V+E
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPKKVRRLAIKSALSSKVLENELLVLEGL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTKE ++ GL+ +KA + + ENV S+RNI + ++T +N+ D+
Sbjct: 130 -AFDAPKTKEMTSVLK--GLEINRKALIVTADADENVALSARNIPGVTVVTVTGVNVLDV 186
Query: 241 LDAETLVLTPSTVDFL 256
++ + ++ T V L
Sbjct: 187 VNHDKVIFTKDAVQKL 202
>gi|227519993|ref|ZP_03950042.1| 50S ribosomal protein L4 [Enterococcus faecalis TX0104]
gi|227555854|ref|ZP_03985901.1| 50S ribosomal protein L4 [Enterococcus faecalis HH22]
gi|229546963|ref|ZP_04435688.1| 50S ribosomal protein L4 [Enterococcus faecalis TX1322]
gi|229550552|ref|ZP_04439277.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 29200]
gi|255971710|ref|ZP_05422296.1| 50S ribosomal protein L4 [Enterococcus faecalis T1]
gi|255974710|ref|ZP_05425296.1| 50S ribosomal protein L4 [Enterococcus faecalis T2]
gi|256855164|ref|ZP_05560525.1| ribosomal protein L4 [Enterococcus faecalis T8]
gi|256956861|ref|ZP_05561032.1| 50S ribosomal protein L4 [Enterococcus faecalis DS5]
gi|256960668|ref|ZP_05564839.1| 50S ribosomal protein L4 [Enterococcus faecalis Merz96]
gi|256964133|ref|ZP_05568304.1| 50S ribosomal protein L4 [Enterococcus faecalis HIP11704]
gi|257078531|ref|ZP_05572892.1| 50S ribosomal protein L4 [Enterococcus faecalis JH1]
gi|257081498|ref|ZP_05575859.1| 50S ribosomal protein L4 [Enterococcus faecalis E1Sol]
gi|257084146|ref|ZP_05578507.1| 50S ribosomal protein L4 [Enterococcus faecalis Fly1]
gi|257087973|ref|ZP_05582334.1| 50S ribosomal protein L4 [Enterococcus faecalis D6]
gi|257088650|ref|ZP_05583011.1| 50S ribosomal protein L4 [Enterococcus faecalis CH188]
gi|257417577|ref|ZP_05594571.1| 50S ribosomal protein L4 [Enterococcus faecalis ARO1/DG]
gi|257418698|ref|ZP_05595692.1| 50S ribosomal protein L4 [Enterococcus faecalis T11]
gi|257421501|ref|ZP_05598491.1| 50S ribosomal protein L4 [Enterococcus faecalis X98]
gi|293382757|ref|ZP_06628682.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis R712]
gi|293388060|ref|ZP_06632588.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis S613]
gi|294781052|ref|ZP_06746403.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
PC1.1]
gi|300861819|ref|ZP_07107899.1| 50S ribosomal protein L4 [Enterococcus faecalis TUSoD Ef11]
gi|307269088|ref|ZP_07550449.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4248]
gi|307274172|ref|ZP_07555380.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0855]
gi|307276397|ref|ZP_07557520.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2134]
gi|307278607|ref|ZP_07559677.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0860]
gi|307287013|ref|ZP_07567088.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0109]
gi|307291646|ref|ZP_07571521.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0411]
gi|312901121|ref|ZP_07760409.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0470]
gi|312904683|ref|ZP_07763838.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0635]
gi|312908652|ref|ZP_07767594.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
512]
gi|312909200|ref|ZP_07768057.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
516]
gi|312952608|ref|ZP_07771472.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0102]
gi|384512116|ref|YP_005707209.1| 50S ribosomal protein L4/L1 family protein [Enterococcus faecalis
OG1RF]
gi|384517290|ref|YP_005704595.1| 50S ribosomal protein L4 [Enterococcus faecalis 62]
gi|421512626|ref|ZP_15959429.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecalis ATCC 29212]
gi|422686482|ref|ZP_16744679.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4000]
gi|422687575|ref|ZP_16745751.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0630]
gi|422691717|ref|ZP_16749746.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0031]
gi|422695444|ref|ZP_16753430.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4244]
gi|422698851|ref|ZP_16756736.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1346]
gi|422700109|ref|ZP_16757965.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1342]
gi|422702664|ref|ZP_16760493.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1302]
gi|422706317|ref|ZP_16764018.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0043]
gi|422709569|ref|ZP_16766950.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0027]
gi|422712990|ref|ZP_16769750.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309A]
gi|422718192|ref|ZP_16774863.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309B]
gi|422721610|ref|ZP_16778197.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0017]
gi|422723176|ref|ZP_16779714.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2137]
gi|422726464|ref|ZP_16782911.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0312]
gi|422728378|ref|ZP_16784796.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0012]
gi|422733231|ref|ZP_16789552.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0645]
gi|422735065|ref|ZP_16791345.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1341]
gi|422738759|ref|ZP_16793946.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2141]
gi|424671746|ref|ZP_18108737.1| 50S ribosomal protein L4 [Enterococcus faecalis 599]
gi|424678854|ref|ZP_18115692.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV103]
gi|424679767|ref|ZP_18116581.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV116]
gi|424684174|ref|ZP_18120900.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV129]
gi|424688385|ref|ZP_18124991.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV25]
gi|424691501|ref|ZP_18128024.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV31]
gi|424695071|ref|ZP_18131455.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV37]
gi|424696538|ref|ZP_18132883.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV41]
gi|424701829|ref|ZP_18137995.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV62]
gi|424704985|ref|ZP_18141071.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV63]
gi|424706311|ref|ZP_18142318.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV65]
gi|424719001|ref|ZP_18148229.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV68]
gi|424719922|ref|ZP_18149048.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV72]
gi|424722793|ref|ZP_18151818.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV73]
gi|424733404|ref|ZP_18161964.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV81]
gi|424735275|ref|ZP_18163745.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV85]
gi|424754618|ref|ZP_18182527.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV93]
gi|424757508|ref|ZP_18185244.1| 50S ribosomal protein L4 [Enterococcus faecalis R508]
gi|428765831|ref|YP_007151942.1| 50S ribosomal protein L4 [Enterococcus faecalis str. Symbioflor 1]
gi|430362544|ref|ZP_19427088.1| 50S ribosomal protein L4 [Enterococcus faecalis OG1X]
gi|430368710|ref|ZP_19428391.1| 50S ribosomal protein L4 [Enterococcus faecalis M7]
gi|227072541|gb|EEI10504.1| 50S ribosomal protein L4 [Enterococcus faecalis TX0104]
gi|227175021|gb|EEI55993.1| 50S ribosomal protein L4 [Enterococcus faecalis HH22]
gi|229304271|gb|EEN70267.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 29200]
gi|229307891|gb|EEN73878.1| 50S ribosomal protein L4 [Enterococcus faecalis TX1322]
gi|255962728|gb|EET95204.1| 50S ribosomal protein L4 [Enterococcus faecalis T1]
gi|255967582|gb|EET98204.1| 50S ribosomal protein L4 [Enterococcus faecalis T2]
gi|256709677|gb|EEU24724.1| ribosomal protein L4 [Enterococcus faecalis T8]
gi|256947357|gb|EEU63989.1| 50S ribosomal protein L4 [Enterococcus faecalis DS5]
gi|256951164|gb|EEU67796.1| 50S ribosomal protein L4 [Enterococcus faecalis Merz96]
gi|256954629|gb|EEU71261.1| 50S ribosomal protein L4 [Enterococcus faecalis HIP11704]
gi|256986561|gb|EEU73863.1| 50S ribosomal protein L4 [Enterococcus faecalis JH1]
gi|256989528|gb|EEU76830.1| 50S ribosomal protein L4 [Enterococcus faecalis E1Sol]
gi|256992176|gb|EEU79478.1| 50S ribosomal protein L4 [Enterococcus faecalis Fly1]
gi|256996003|gb|EEU83305.1| 50S ribosomal protein L4 [Enterococcus faecalis D6]
gi|256997462|gb|EEU83982.1| 50S ribosomal protein L4 [Enterococcus faecalis CH188]
gi|257159405|gb|EEU89365.1| 50S ribosomal protein L4 [Enterococcus faecalis ARO1/DG]
gi|257160526|gb|EEU90486.1| 50S ribosomal protein L4 [Enterococcus faecalis T11]
gi|257163325|gb|EEU93285.1| 50S ribosomal protein L4 [Enterococcus faecalis X98]
gi|291079917|gb|EFE17281.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis R712]
gi|291082511|gb|EFE19474.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis S613]
gi|294451855|gb|EFG20306.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
PC1.1]
gi|295112507|emb|CBL31144.1| Ribosomal protein L4 [Enterococcus sp. 7L76]
gi|300848344|gb|EFK76101.1| 50S ribosomal protein L4 [Enterococcus faecalis TUSoD Ef11]
gi|306497265|gb|EFM66807.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0411]
gi|306501959|gb|EFM71248.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0109]
gi|306504667|gb|EFM73867.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0860]
gi|306506877|gb|EFM76024.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2134]
gi|306509134|gb|EFM78196.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0855]
gi|306514568|gb|EFM83122.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4248]
gi|310625439|gb|EFQ08722.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
512]
gi|310629396|gb|EFQ12679.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0102]
gi|310632035|gb|EFQ15318.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0635]
gi|311290442|gb|EFQ68998.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis DAPTO
516]
gi|311291793|gb|EFQ70349.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0470]
gi|315026834|gb|EFT38766.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2137]
gi|315028874|gb|EFT40806.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4000]
gi|315031140|gb|EFT43072.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0017]
gi|315036014|gb|EFT47946.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0027]
gi|315145337|gb|EFT89353.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX2141]
gi|315147170|gb|EFT91186.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX4244]
gi|315151072|gb|EFT95088.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0012]
gi|315153608|gb|EFT97624.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0031]
gi|315156212|gb|EFU00229.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0043]
gi|315158643|gb|EFU02660.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0312]
gi|315160729|gb|EFU04746.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0645]
gi|315165900|gb|EFU09917.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1302]
gi|315168101|gb|EFU12118.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1341]
gi|315171459|gb|EFU15476.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1342]
gi|315172693|gb|EFU16710.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX1346]
gi|315573515|gb|EFU85706.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309B]
gi|315579327|gb|EFU91518.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0630]
gi|315582137|gb|EFU94328.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
TX0309A]
gi|323479423|gb|ADX78862.1| 50S ribosomal protein L4 [Enterococcus faecalis 62]
gi|327534005|gb|AEA92839.1| ribosomal protein L4/L1 family protein [Enterococcus faecalis
OG1RF]
gi|401674314|gb|EJS80669.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecalis ATCC 29212]
gi|402350557|gb|EJU85459.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV103]
gi|402355722|gb|EJU90484.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV116]
gi|402358014|gb|EJU92702.1| 50S ribosomal protein L4 [Enterococcus faecalis 599]
gi|402360829|gb|EJU95423.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV25]
gi|402362056|gb|EJU96596.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV31]
gi|402362731|gb|EJU97249.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV129]
gi|402368918|gb|EJV03217.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV37]
gi|402370793|gb|EJV04982.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV62]
gi|402377580|gb|EJV11478.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV41]
gi|402380077|gb|EJV13846.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV68]
gi|402380595|gb|EJV14345.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV63]
gi|402388119|gb|EJV21568.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV65]
gi|402392112|gb|EJV25388.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV81]
gi|402394885|gb|EJV28032.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV72]
gi|402400855|gb|EJV33662.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV73]
gi|402403067|gb|EJV35759.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV93]
gi|402404165|gb|EJV36796.1| 50S ribosomal protein L4 [Enterococcus faecalis ERV85]
gi|402406835|gb|EJV39380.1| 50S ribosomal protein L4 [Enterococcus faecalis R508]
gi|427184004|emb|CCO71228.1| 50S ribosomal protein L4 [Enterococcus faecalis str. Symbioflor 1]
gi|429512058|gb|ELA01677.1| 50S ribosomal protein L4 [Enterococcus faecalis OG1X]
gi|429516154|gb|ELA05649.1| 50S ribosomal protein L4 [Enterococcus faecalis M7]
Length = 207
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSDKVAENNLVAVEGLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + S+RN+ + ++T +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLSIDTK---VLVVLENGNDFAALSARNLPNVSVVTSDNVSVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ A ++ T + +
Sbjct: 186 VVSANKVLATQTAL 199
>gi|418029966|ref|ZP_12668483.1| hypothetical protein LDBUL1632_01277 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|418035241|ref|ZP_12673699.1| hypothetical protein LDBUL1519_00399 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354688429|gb|EHE88468.1| hypothetical protein LDBUL1632_01277 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690659|gb|EHE90603.1| hypothetical protein LDBUL1519_00399 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 199
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
G GE L+ + + AVV A+I KR+GT+ R VRGGG+KP+ QK
Sbjct: 4 NGNNAGEVTLNDNVFSVEPNEAVVFDAIIRQRAGKRQGTSKVKNRSAVRGGGKKPWRQKG 63
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R P GGGVVFGP PR ++ + +K++RLAI + ++ +N +V+++
Sbjct: 64 TGRARQGSIRAPQWRGGGVVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLLDQNLVVLDKL 123
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ PKT++F+ + L+ K LV+ +NV+ S++N+ +K++ LN+ D
Sbjct: 124 --TMDAPKTRDFVAILNGLKLEGK----VLVVSDDKNVQLSAKNLPKVKVVPVNGLNVED 177
Query: 240 ILDAETLVLTPSTV 253
++ + LVLT V
Sbjct: 178 AVNYDKLVLTQDDV 191
>gi|418737741|ref|ZP_13294138.1| 50S ribosomal protein L4 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410746935|gb|EKQ99841.1| 50S ribosomal protein L4 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 211
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A ++ A+ + N R G +T TR EVRGGG+KP+SQK TGRAR+GS R P GGG V
Sbjct: 30 ASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGTGRARQGSTRAPHWVGGGTVH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP+ RD+S K++ K K A+ + + A A V+E+ D + TK F + L
Sbjct: 90 GPQKRDYSYKVSSKLKHRAVLSILNKKAQASAVKVIEDLD--LKEYSTKSFDSIFKNMNL 147
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
FLV S+ V+KS RNI T+K + + ++ DIL LV+T + ++ + +Y
Sbjct: 148 RNTGVIGFLVQGESDFVKKSVRNIPTVKYINSKRISCRDILYNRNLVITEAALNEMLTQY 207
Query: 261 GVE 263
G +
Sbjct: 208 GAQ 210
>gi|212550450|ref|YP_002308767.1| 50S ribosomal protein L4 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|226730614|sp|B6YQ84.1|RL4_AZOPC RecName: Full=50S ribosomal protein L4
gi|212548688|dbj|BAG83356.1| 50S ribosomal protein L4 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 208
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ NKR+GTA + R E+ G RK QK +G ARRG +P+ GG VFGPKPRD+S K
Sbjct: 41 LANKRQGTAKSKERSEMSGSTRKLGRQKGSGGARRGDINSPVLVGGARVFGPKPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKKEK++A + ++ IVVE+F FE PKTKEF++ + + ++
Sbjct: 101 LNKKEKKMARRSVLSCRMREGGVIVVEDFS--FETPKTKEFLDLAKNLKIQIANSKLLVI 158
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
+ E +N+ S+RNI +K+ T LN ++ILD LV+ S+V +N
Sbjct: 159 LPEKDDNIFLSARNISKVKVTTVSNLNTYEILDVNRLVILESSVVAIN 206
>gi|386820889|ref|ZP_10108105.1| 50S ribosomal protein L4, bacterial/organelle [Joostella marina DSM
19592]
gi|386425995|gb|EIJ39825.1| 50S ribosomal protein L4, bacterial/organelle [Joostella marina DSM
19592]
Length = 209
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 105/164 (64%), Gaps = 3/164 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK QK TG AR GS ++P+ GGG +FGP+P+D++ K
Sbjct: 41 LANQRQGTHKSKERAEIAGSTRKIKKQKGTGTARAGSIKSPIFKGGGRIFGPRPKDYTQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A+ A ++ IV+E+FD FE PKTK F ++ GL+ K K+ F++
Sbjct: 101 LNKNVKRLARRSALTIKAQEKSIIVLEDFD--FEAPKTKNFTNVLKALGLENK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ + NV SSRN+ T +++T L+ + I++A +VL +++
Sbjct: 158 GDSNNNVYLSSRNLKTSEVVTNSELSTYRIVNANNIVLLEGSIE 201
>gi|298373699|ref|ZP_06983688.1| ribosomal protein L4/L1 family protein [Bacteroidetes oral taxon
274 str. F0058]
gi|298274751|gb|EFI16303.1| ribosomal protein L4/L1 family protein [Bacteroidetes oral taxon
274 str. F0058]
Length = 212
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 3/173 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
M NKR+GT + R E+ G +K QK G ARRG +PL GG VFGPKPRD+S K
Sbjct: 41 MANKRQGTHKSKERSEIAGSTKKLGRQKGGGGARRGDINSPLLHGGARVFGPKPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K+LA +A A+ AA +VVE+F+ FE PKTK+F+ ++ K K ++
Sbjct: 101 LNKKLKQLARKSAFATKAAENAIVVVEDFN--FEAPKTKDFVAITNNLKINDK-KILLIL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
E ++N+ SSRN+ + ++T L+ + ILD L+++ V ++ + VE
Sbjct: 158 GENNKNIFLSSRNLPKVNVITTDELSTYKILDCAVLLISEKAVAGIDQHFKVE 210
>gi|295425651|ref|ZP_06818338.1| ribosomal protein L4/L1 family protein [Lactobacillus amylolyticus
DSM 11664]
gi|295064667|gb|EFG55588.1| ribosomal protein L4/L1 family protein [Lactobacillus amylolyticus
DSM 11664]
Length = 205
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 114/200 (57%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ GE L+ K + +VV A+I +R+GT+ R VRGGG+K
Sbjct: 4 LKVIDQNGKDSGEVTLNDKVFGIEPNESVVFEAIIRQRAGQRQGTSKVKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ + +K++RLAI + ++ +N
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYAYSMPRKQRRLAIKSVLSQKLIDKNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKEF+ + ++ K LV+ +NV+ S++N+ +K++
Sbjct: 124 IVLDKLT--MSAPKTKEFVSILDSLKVESK----VLVVSDDKNVQLSAKNLPKVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ + L+LT V
Sbjct: 178 GLNVEDAVNYDKLILTQDAV 197
>gi|317153957|ref|YP_004122005.1| 50S ribosomal protein L4 [Desulfovibrio aespoeensis Aspo-2]
gi|316944208|gb|ADU63259.1| ribosomal protein L4/L1e [Desulfovibrio aespoeensis Aspo-2]
Length = 206
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 5/155 (3%)
Query: 94 KRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINK 153
KR GT +T TRG GGGRKP+ QK TGRAR GS+R+PL GG V+FGP+PRD+S K+NK
Sbjct: 44 KRSGTHATKTRGMKSGGGRKPWRQKGTGRARAGSSRSPLWRGGAVLFGPQPRDYSFKVNK 103
Query: 154 KEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV 213
K ++LA+ A++S A + VV+ D KTK F + + GL K ++ +
Sbjct: 104 KIRKLALQMALSSRVAEDKVTVVKSID--LAEIKTKAFAAVVEKLGLG---KTLIVLKDA 158
Query: 214 SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVL 248
N+ S+RN+ +K++ LN++D+L LV+
Sbjct: 159 DLNLALSARNVPGIKVIEADKLNVYDVLLYPELVM 193
>gi|406837803|ref|ZP_11097397.1| 50S ribosomal protein L4 [Lactobacillus vini DSM 20605]
Length = 207
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K GE L + +VV A++ + R+GT + R V GGG+KP+ QK T
Sbjct: 11 GSKNGEVSLSKEIFGIKPNESVVFDAVLMQRASLRQGTHAVKNRSAVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG VFGP PR +S K+ +K +RLAI + ++ A ++ +VV++
Sbjct: 71 GRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVADQDLMVVDKL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTK+F + + LD + K ++ + ++ S+RN+ + ++ + +N+ D+
Sbjct: 130 -TFEAPKTKDFAKVLA--SLDVQSKVLVVLEDGNDLAALSARNLANVTVINAKNVNVLDV 186
Query: 241 LDAETLVLT 249
L+ + LV+T
Sbjct: 187 LNNDKLVMT 195
>gi|420188238|ref|ZP_14694249.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM039]
gi|394255167|gb|EJE00126.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM039]
Length = 207
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|418413219|ref|ZP_12986462.1| 50S ribosomal protein L4 [Staphylococcus epidermidis BVS058A4]
gi|418612909|ref|ZP_13175932.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU117]
gi|418627182|ref|ZP_13189762.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU126]
gi|420164288|ref|ZP_14671019.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM095]
gi|420169145|ref|ZP_14675749.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM087]
gi|420173528|ref|ZP_14680020.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM067]
gi|420183543|ref|ZP_14689671.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM049]
gi|420185846|ref|ZP_14691923.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM040]
gi|420195309|ref|ZP_14701103.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM021]
gi|420214720|ref|ZP_14719996.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH05005]
gi|420217039|ref|ZP_14722226.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH05001]
gi|420235089|ref|ZP_14739641.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH051475]
gi|261264935|gb|ACX55826.1| 50S ribosomal protein L4 [Staphylococcus epidermidis]
gi|374817640|gb|EHR81819.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU117]
gi|374830045|gb|EHR93834.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU126]
gi|394231909|gb|EJD77530.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM095]
gi|394232039|gb|EJD77659.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM087]
gi|394239883|gb|EJD85315.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM067]
gi|394248717|gb|EJD93948.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM049]
gi|394253200|gb|EJD98213.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM040]
gi|394263506|gb|EJE08237.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM021]
gi|394283112|gb|EJE27289.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH05005]
gi|394290810|gb|EJE34656.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH05001]
gi|394303617|gb|EJE47035.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH051475]
gi|410879307|gb|EKS27157.1| 50S ribosomal protein L4 [Staphylococcus epidermidis BVS058A4]
Length = 207
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
V+ F FE PKTKEF + +Q LV+ SE NVE S+RNI +++ T +
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTTL----EQPKKVLVVTESEDVNVELSARNIPGVQVTTAQ 179
Query: 234 TLNLFDILDAETLVLT 249
LN+ D+ A+++++T
Sbjct: 180 GLNVLDLTSADSVIIT 195
>gi|88803749|ref|ZP_01119273.1| 50S ribosomal protein L4 [Polaribacter irgensii 23-P]
gi|88780482|gb|EAR11663.1| 50S ribosomal protein L4 [Polaribacter irgensii 23-P]
Length = 209
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK QK TG AR GS ++ + GGG +FGP+PRD+S K
Sbjct: 41 LANQRQGTHKSKERAEISGSTRKIKKQKGTGTARAGSIKSGVFRGGGRMFGPRPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A++ A EN IV+E+F+ FE PKTK F++ ++ LD + K+ F++
Sbjct: 101 LNKSLKRLARKSALSIQAKDENVIVIEDFN--FETPKTKNFLDVLKSLELDTR-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
+ NV SSRN+ K++ L + +L+ LV+T +++ +N
Sbjct: 158 SNENANVYLSSRNLKKSKVIKASELYTYGVLNTNKLVITEGSLEEIN 204
>gi|116495946|ref|YP_807680.1| 50S ribosomal protein L4 [Lactobacillus casei ATCC 334]
gi|122262654|sp|Q034Y4.1|RL4_LACC3 RecName: Full=50S ribosomal protein L4
gi|116106096|gb|ABJ71238.1| LSU ribosomal protein L4P [Lactobacillus casei ATCC 334]
Length = 207
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R V GGGRKP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAVVMQRDSLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ K+ KK +RLAI + ++ + +VV+ + F+ PKTK F + GL
Sbjct: 92 PTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLN--FDAPKTKAFATVLD--GLK 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
KA ++ + +E K++RN+ +K++ +N+ D++D + L+LT S +
Sbjct: 148 VSDKALVVLEDGNEVAAKAARNLPNVKVVPAEGINVLDVVDYKKLILTQSAL 199
>gi|117927516|ref|YP_872067.1| 50S ribosomal protein L4P [Acidothermus cellulolyticus 11B]
gi|117647979|gb|ABK52081.1| LSU ribosomal protein L4P [Acidothermus cellulolyticus 11B]
Length = 220
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ ++ + R+GT T TRGEV GGG+KPY QK TGRAR+GS R P GGGVV G
Sbjct: 28 LIHQVVVAQLAAARQGTHKTRTRGEVSGGGKKPYRQKGTGRARQGSIRAPQFTGGGVVHG 87
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF-DGKFERPKTKEFIEAMRRWGL 200
P PR + + KK K A+ A+ A A V+ DG E P TK+ +EA+ R L
Sbjct: 88 PMPRHYDQRTPKKMKAAALRGALTDRARAGRIHVLPRIVDG--EAPSTKQALEAL-RTAL 144
Query: 201 DPKQKATFLVMEVSENVE-KSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
+++ +V++ + KS RNI + +L LN +D+L ++ +V T + GR
Sbjct: 145 GTERRRVLVVLDRGDETGWKSLRNIPDVHLLVADQLNAYDVLSSDDVVFTEQALSEFLGR 204
Query: 260 YGVE-FEGDGDEE 271
G EGDGDE+
Sbjct: 205 GGDRTAEGDGDEQ 217
>gi|27468741|ref|NP_765378.1| 50S ribosomal protein L4 [Staphylococcus epidermidis ATCC 12228]
gi|57867722|ref|YP_189393.1| 50S ribosomal protein L4 [Staphylococcus epidermidis RP62A]
gi|242243948|ref|ZP_04798391.1| 50S ribosomal protein L4 [Staphylococcus epidermidis W23144]
gi|251812048|ref|ZP_04826521.1| 50S ribosomal protein L4 [Staphylococcus epidermidis BCM-HMP0060]
gi|282875343|ref|ZP_06284216.1| ribosomal protein L4/L1 family protein [Staphylococcus epidermidis
SK135]
gi|293368434|ref|ZP_06615058.1| 50S ribosomal protein L4 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|416125879|ref|ZP_11596226.1| 50S ribosomal protein L4 [Staphylococcus epidermidis FRI909]
gi|417656442|ref|ZP_12306127.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU028]
gi|417658719|ref|ZP_12308339.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU045]
gi|417908320|ref|ZP_12552078.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU037]
gi|417912346|ref|ZP_12556040.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU105]
gi|417913293|ref|ZP_12556962.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU109]
gi|418327341|ref|ZP_12938502.1| 50S ribosomal protein L4 [Staphylococcus epidermidis 14.1.R1.SE]
gi|418605581|ref|ZP_13168899.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU041]
gi|418607993|ref|ZP_13171211.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU057]
gi|418615008|ref|ZP_13177964.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU118]
gi|418621676|ref|ZP_13184442.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU123]
gi|418623780|ref|ZP_13186479.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU125]
gi|418628293|ref|ZP_13190847.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU127]
gi|418631110|ref|ZP_13193580.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU128]
gi|418634526|ref|ZP_13196920.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU129]
gi|418664291|ref|ZP_13225774.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU081]
gi|419768348|ref|ZP_14294475.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-250]
gi|420166463|ref|ZP_14673148.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM088]
gi|420170733|ref|ZP_14677292.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM070]
gi|420175820|ref|ZP_14682250.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM061]
gi|420176641|ref|ZP_14683049.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM057]
gi|420181243|ref|ZP_14687447.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM053]
gi|420191152|ref|ZP_14697087.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM037]
gi|420191507|ref|ZP_14697423.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM023]
gi|420199214|ref|ZP_14704894.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM031]
gi|420203076|ref|ZP_14708661.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM018]
gi|420205087|ref|ZP_14710622.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM015]
gi|420207145|ref|ZP_14712637.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM008]
gi|420209971|ref|ZP_14715404.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM003]
gi|420212726|ref|ZP_14718073.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM001]
gi|420221080|ref|ZP_14726034.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH04008]
gi|420223431|ref|ZP_14728328.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH08001]
gi|420223916|ref|ZP_14728778.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH06004]
gi|420228357|ref|ZP_14733109.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH05003]
gi|420229984|ref|ZP_14734684.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH04003]
gi|420232435|ref|ZP_14737073.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH051668]
gi|421607963|ref|ZP_16049195.1| 50S ribosomal protein L4 [Staphylococcus epidermidis AU12-03]
gi|46577254|sp|Q8CRG1.1|RL4_STAES RecName: Full=50S ribosomal protein L4
gi|81673579|sp|Q5HM00.1|RL4_STAEQ RecName: Full=50S ribosomal protein L4
gi|27316289|gb|AAO05464.1|AE016750_69 50S ribosomal protein L4 [Staphylococcus epidermidis ATCC 12228]
gi|57638380|gb|AAW55168.1| ribosomal protein L4 [Staphylococcus epidermidis RP62A]
gi|242232581|gb|EES34893.1| 50S ribosomal protein L4 [Staphylococcus epidermidis W23144]
gi|251804382|gb|EES57039.1| 50S ribosomal protein L4 [Staphylococcus epidermidis BCM-HMP0060]
gi|261264939|gb|ACX55828.1| 50S ribosomal protein L4 [Staphylococcus epidermidis]
gi|281296108|gb|EFA88629.1| ribosomal protein L4/L1 family protein [Staphylococcus epidermidis
SK135]
gi|291317392|gb|EFE57814.1| 50S ribosomal protein L4 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319400622|gb|EFV88847.1| 50S ribosomal protein L4 [Staphylococcus epidermidis FRI909]
gi|329736448|gb|EGG72716.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU028]
gi|329737013|gb|EGG73268.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU045]
gi|341650920|gb|EGS74729.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU105]
gi|341656197|gb|EGS79917.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU037]
gi|341656386|gb|EGS80105.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU109]
gi|365233072|gb|EHM74039.1| 50S ribosomal protein L4 [Staphylococcus epidermidis 14.1.R1.SE]
gi|374402029|gb|EHQ73075.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU041]
gi|374403154|gb|EHQ74163.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU057]
gi|374410589|gb|EHQ81332.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU081]
gi|374818763|gb|EHR82910.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU118]
gi|374828354|gb|EHR92189.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU123]
gi|374829514|gb|EHR93314.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU125]
gi|374835878|gb|EHR99474.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU128]
gi|374837056|gb|EHS00629.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU129]
gi|374838345|gb|EHS01892.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU127]
gi|383360262|gb|EID37665.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
IS-250]
gi|394233674|gb|EJD79271.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM088]
gi|394239785|gb|EJD85218.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM070]
gi|394242507|gb|EJD87898.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM061]
gi|394246943|gb|EJD92194.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM053]
gi|394252484|gb|EJD97518.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM057]
gi|394257961|gb|EJE02860.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM037]
gi|394266540|gb|EJE11172.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM023]
gi|394268790|gb|EJE13344.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM018]
gi|394271167|gb|EJE15665.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM015]
gi|394272370|gb|EJE16832.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM031]
gi|394275619|gb|EJE19992.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM008]
gi|394277403|gb|EJE21727.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM003]
gi|394279110|gb|EJE23420.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIHLM001]
gi|394285310|gb|EJE29393.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH04008]
gi|394287454|gb|EJE31414.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH08001]
gi|394294941|gb|EJE38601.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH05003]
gi|394296978|gb|EJE40592.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH06004]
gi|394298456|gb|EJE42026.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH04003]
gi|394301297|gb|EJE44759.1| 50S ribosomal protein L4 [Staphylococcus epidermidis NIH051668]
gi|406656384|gb|EKC82791.1| 50S ribosomal protein L4 [Staphylococcus epidermidis AU12-03]
Length = 207
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|404492292|ref|YP_006716398.1| 50S ribosomal protein L4 [Pelobacter carbinolicus DSM 2380]
gi|109893615|sp|Q3A6P6.1|RL4_PELCD RecName: Full=50S ribosomal protein L4
gi|77544399|gb|ABA87961.1| ribosomal protein L4 [Pelobacter carbinolicus DSM 2380]
Length = 206
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 106/180 (58%), Gaps = 5/180 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + +R+GT++ R V GGG+KPY QK TG AR+G+ R P GGG FG
Sbjct: 32 LIHDMVRYQLAARRQGTSAAKNRSAVAGGGKKPYRQKGTGNARQGTIRAPHFVGGGAAFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PRD+S K+N+K K+ A+ +A+++ E V+ +F + E+ TK +E + R+ L
Sbjct: 92 PSPRDFSFKLNRKVKKAALRSALSARFKEERVAVLNDF--QLEKIGTKAVVEVLNRFELS 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
+V E + N+E S+RN+ +K+L +N++D+++ LV+T V+ L G G
Sbjct: 150 ---NVLVVVGEDNRNLELSARNLPHVKVLKAEGVNVYDLMNHRNLVVTEGAVEQLEGALG 206
>gi|419771487|ref|ZP_14297539.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-K]
gi|383361211|gb|EID38589.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus IS-K]
Length = 207
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEEVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|331702079|ref|YP_004399038.1| 50S ribosomal protein L4 [Lactobacillus buchneri NRRL B-30929]
gi|406027552|ref|YP_006726384.1| 50S ribosomal protein L4 [Lactobacillus buchneri CD034]
gi|329129422|gb|AEB73975.1| ribosomal protein L4/L1e [Lactobacillus buchneri NRRL B-30929]
gi|405126041|gb|AFS00802.1| 50S ribosomal protein L4 [Lactobacillus buchneri CD034]
Length = 207
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT S R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAIVMQRASLRQGTHSVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR +S ++ KK RLA+ + ++ + +VV+ +F+ PKTKEF E + + LD
Sbjct: 92 PTPRSYSYRLPKKVSRLALKSVLSEKVSDNKLVVVDTL--QFDAPKTKEFAELLGK--LD 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K ++ + +E S+RN+ +K+++ + +N D+ D + +V+T + +
Sbjct: 148 VSTKTLVVLEDDNEKAVLSARNLENVKVVSAQGINTLDVADHDKVVITKAAL 199
>gi|291296990|ref|YP_003508388.1| 50S ribosomal protein L4 [Meiothermus ruber DSM 1279]
gi|290471949|gb|ADD29368.1| ribosomal protein L4/L1e [Meiothermus ruber DSM 1279]
Length = 206
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 119/201 (59%), Gaps = 9/201 (4%)
Query: 71 LKSAAPDTARA-VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNR 129
+++A P+ ++ V++ + + ++RRGTA+T TRG V +K Y+QK TGRAR G
Sbjct: 13 VEAALPEKVKSHVLYEVVRWQLASRRRGTAATKTRGMVNFTTKKMYAQKHTGRARHGDYG 72
Query: 130 TPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTK 189
P+ GGG VFGP+PRD+S + KK ++L ++ A+A A +VE+F G KTK
Sbjct: 73 APIFVGGGTVFGPQPRDYSYTLPKKVRKLGLAMALADRAKEGKFFLVEDFKG--VNGKTK 130
Query: 190 EFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
EF+ ++ L+ + L++ E V +++RN+ +++L P LN++DI+ E LV+
Sbjct: 131 EFVAWLKAHNLE---GPSILLVTSDEKVARAARNLPKVRVLAPEGLNVYDIMRQEALVME 187
Query: 250 PSTVDFLNGRYGVEFEGDGDE 270
S + + + G +G+G E
Sbjct: 188 ASAWEGVQAKLG---QGEGGE 205
>gi|300728442|ref|ZP_07061804.1| ribosomal protein, L4/L1 family [Prevotella bryantii B14]
gi|299774361|gb|EFI70991.1| ribosomal protein, L4/L1 family [Prevotella bryantii B14]
Length = 209
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GTA + R E+ G RK QK G ARRG +P+ GGG VFGPKPRD+ K
Sbjct: 41 LANQRQGTAKSKERSEMSGSTRKLGRQKGGGGARRGDINSPVLVGGGRVFGPKPRDYRFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A +VVE+F+ FE PKTK+F+ + +D K KA ++
Sbjct: 101 LNKKVKVLARKSALTYKAQENAIVVVEDFN--FEAPKTKDFVNIAKNLKVDNK-KALVVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
EV++NV S+RN+ + T ++N + +L+A+ LV++ S+++
Sbjct: 158 PEVNKNVYLSARNLKKANVETASSINAYKVLNADVLVISESSLE 201
>gi|191639427|ref|YP_001988593.1| 50S ribosomal protein L4 [Lactobacillus casei BL23]
gi|227533961|ref|ZP_03964010.1| 50S ribosomal protein L4 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239630350|ref|ZP_04673381.1| 50S ribosomal protein L4 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067502|ref|YP_003789525.1| 50S ribosomal protein L4 [Lactobacillus casei str. Zhang]
gi|385821189|ref|YP_005857576.1| 50S ribosomal protein L4 [Lactobacillus casei LC2W]
gi|385824382|ref|YP_005860724.1| 50S ribosomal protein L4 [Lactobacillus casei BD-II]
gi|409998286|ref|YP_006752687.1| 50S ribosomal protein L4 [Lactobacillus casei W56]
gi|417981690|ref|ZP_12622355.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei 12A]
gi|417984507|ref|ZP_12625129.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei 21/1]
gi|417987764|ref|ZP_12628318.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei 32G]
gi|417990801|ref|ZP_12631266.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei A2-362]
gi|417994124|ref|ZP_12634459.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei CRF28]
gi|417995423|ref|ZP_12635716.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei M36]
gi|418000145|ref|ZP_12640343.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei T71499]
gi|418003284|ref|ZP_12643375.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei UCD174]
gi|418006319|ref|ZP_12646278.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei UW1]
gi|418011886|ref|ZP_12651635.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei Lc-10]
gi|418014985|ref|ZP_12654569.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei Lpc-37]
gi|226730677|sp|B3WAL6.1|RL4_LACCB RecName: Full=50S ribosomal protein L4
gi|190713729|emb|CAQ67735.1| 50S ribosomal protein L4 [Lactobacillus casei BL23]
gi|227188338|gb|EEI68405.1| 50S ribosomal protein L4 [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239527962|gb|EEQ66963.1| 50S ribosomal protein L4 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439909|gb|ADK19675.1| Ribosomal protein L4 [Lactobacillus casei str. Zhang]
gi|327383516|gb|AEA54992.1| 50S ribosomal protein L4 [Lactobacillus casei LC2W]
gi|327386709|gb|AEA58183.1| 50S ribosomal protein L4 [Lactobacillus casei BD-II]
gi|406359298|emb|CCK23568.1| 50S ribosomal protein L4 [Lactobacillus casei W56]
gi|410521829|gb|EKP96787.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei 12A]
gi|410522586|gb|EKP97530.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei 32G]
gi|410525301|gb|EKQ00204.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei 21/1]
gi|410530780|gb|EKQ05548.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei CRF28]
gi|410533659|gb|EKQ08327.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei A2-362]
gi|410537391|gb|EKQ11966.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei T71499]
gi|410537560|gb|EKQ12133.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei M36]
gi|410542661|gb|EKQ17096.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei UCD174]
gi|410544243|gb|EKQ18579.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei UW1]
gi|410551502|gb|EKQ25560.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei Lc-10]
gi|410552507|gb|EKQ26531.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei Lpc-37]
Length = 207
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R V GGGRKP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ K+ KK +RLAI + ++ + +VV+ + F+ PKTK F + GL
Sbjct: 92 PTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLN--FDAPKTKAFATVLD--GLK 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
KA ++ + +E K++RN+ +K++ +N+ D++D + L+LT S +
Sbjct: 148 VSDKALVVLEDGNEVAAKAARNLPNVKVVPAEGINVLDVVDYKKLILTQSAL 199
>gi|336397369|ref|ZP_08578169.1| LSU ribosomal protein L4P [Prevotella multisaccharivorax DSM 17128]
gi|336067105|gb|EGN55739.1| LSU ribosomal protein L4P [Prevotella multisaccharivorax DSM 17128]
Length = 209
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 6/203 (2%)
Query: 54 LPILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ G++ G + L+ + V++ + M N+R+GTA + R E+ G R
Sbjct: 3 LSVLNINGQETGRKVTLNDAVFGIEPNDHVIYLDVKQYMANQRQGTAKSKERSELSGSTR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K QK G ARRG +P+ GG VFGPKPRD+S K+NKK K LA +A++ A
Sbjct: 63 KLGRQKGGGGARRGDINSPVLVGGARVFGPKPRDYSFKLNKKVKILARKSALSYKAKDNE 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM-EVSENVEKSSRNIGTLKMLT 231
IVV+ FD PKTK+F+ + +D K+ T +V+ EV++NV S+RN+ ++++
Sbjct: 123 IIVVDNFD--LSAPKTKDFVNITKNLKVDGKK--TLVVLPEVNKNVHLSARNLQKAEIMS 178
Query: 232 PRTLNLFDILDAETLVLTPSTVD 254
+N + IL+A+ LV+T ++++
Sbjct: 179 ASNINTYKILNADVLVITEASLE 201
>gi|417645759|ref|ZP_12295652.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU144]
gi|329731224|gb|EGG67594.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU144]
Length = 207
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVDLNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|383787039|ref|YP_005471608.1| 50S ribosomal protein L4 [Fervidobacterium pennivorans DSM 9078]
gi|383109886|gb|AFG35489.1| 50S ribosomal protein L4, bacterial/organelle [Fervidobacterium
pennivorans DSM 9078]
Length = 223
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 17/216 (7%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
+ + + + GEKIG + + + V+ R + + N R GTAST TRGEV GGG
Sbjct: 2 AHVALWNIKGEKIGTIEVSDEVFNIEPNLDVMWRYIDMQLTNARAGTASTKTRGEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKP+ QK TGRAR+GS R GGV GPKPR + ++NKK KRLA+ +A++
Sbjct: 62 RKPWPQKHTGRARQGSIRAIHWRHGGVAHGPKPRKFLKRLNKKMKRLALKSALSVRFREG 121
Query: 172 NTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE---NVEKSSRNIGTLK 228
N IV+ D +F++P+TK+ E ++ G+ +K F++ + + NV+ S RNI +K
Sbjct: 122 NLIVLS--DIRFDKPQTKQMREVLKALGI-ADEKVLFVLPKKEDSYVNVKLSGRNIPGVK 178
Query: 229 MLTPRT-----------LNLFDILDAETLVLTPSTV 253
++ LN++DI++A +VLT TV
Sbjct: 179 VIIADNPNNNEGNNIDGLNVYDIINASKVVLTEGTV 214
>gi|256371216|ref|YP_003109040.1| 50S ribosomal protein L4/L1e [Acidimicrobium ferrooxidans DSM
10331]
gi|256007800|gb|ACU53367.1| ribosomal protein L4/L1e [Acidimicrobium ferrooxidans DSM 10331]
Length = 214
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 56 ILSFTGEKIGETYL--DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
++ TG + E L ++ + AP+ A ++H+ ++ + RRGT ST TR EV GGG K
Sbjct: 6 VIDATGRTLREEELPGEVFAHAPNIA--LLHQVVVAEQAGARRGTHSTKTRAEVAGGGAK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
PY QK TG AR+GS R P GGG+V GPKPRD+S + +K R A++ A++ A+A
Sbjct: 64 PYRQKGTGNARQGSIRAPQYKGGGIVHGPKPRDYSQRTPRKMLRAALAQALSDRASAGVI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+E D P TK + +R GL+ ++ + E V KS RN+ T+++
Sbjct: 124 YVLE--DDVITAPSTKAALACLRGAGLEDRKVLALVAGATDEAVFKSVRNLPTVRVHRAG 181
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRYGVEF 264
+ + +L ++ ++ T + + L GR GVE
Sbjct: 182 LVLVSAVLASDAVLFTRAALAELLGRVGVEV 212
>gi|29374852|ref|NP_814005.1| 50S ribosomal protein L4 [Enterococcus faecalis V583]
gi|46577230|sp|Q839G3.1|RL4_ENTFA RecName: Full=50S ribosomal protein L4
gi|29342310|gb|AAO80076.1| ribosomal protein L4 [Enterococcus faecalis V583]
Length = 207
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K KK +RLA+ + ++ A N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKFPKKVRRLAMKSVLSDKVAENNLVAVEGLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + S+RN+ + ++T +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLSIDTK---VLVVLENGNDFAALSARNLPNVSVVTSDNVSVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ A ++ T + +
Sbjct: 186 VVSANKVLATQTAL 199
>gi|282926795|ref|ZP_06334422.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A10102]
gi|282591246|gb|EFB96319.1| 50S ribosomal protein L4/L1 [Staphylococcus aureus A10102]
Length = 207
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + +GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLCQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ A V
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLST--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|367470159|ref|ZP_09469875.1| LSU ribosomal protein L4p (L1e) [Patulibacter sp. I11]
gi|365814737|gb|EHN09919.1| LSU ribosomal protein L4p (L1e) [Patulibacter sp. I11]
Length = 212
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 6/179 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
+VH+ + ++ +R+GTA T TRG+V GGG KP+ QK TGRAR GS+R+P+ GGG +FG
Sbjct: 27 LVHQNVRHELNARRQGTAKTKTRGQVSGGGSKPWRQKGTGRARAGSSRSPIWTGGGTIFG 86
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD-GKFERPKTKEFIEAMRRWGL 200
P PR ++ KIN+KEKR A+ +A++ + V FD G F P TK ++ W
Sbjct: 87 PSPRHYTFKINRKEKRAALRSALSLHGLRGS---VAAFDIGTFAEPSTKAAGSLLKGW-- 141
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
D K ++ E V S RN+ + +L + + D++ A L+L+ +D L R
Sbjct: 142 DGKGSILVVLAESEAKVALSFRNLTKVSVLPAEAVGVADVVGAGRLLLSQVAIDELTNR 200
>gi|260905720|ref|ZP_05914042.1| LSU ribosomal protein L4P [Brevibacterium linens BL2]
Length = 217
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 3/207 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ G K G L + T ++H+ ++ + R+GT T TR EVRGGGRK
Sbjct: 7 VDVVDAAGAKTGSVELPAEIFGVQTNVPLIHQVVVAQLAAARQGTHKTKTRSEVRGGGRK 66
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
PY QK TG AR+GS R P GGGVV GP PRD+S + KK K A+ A++ A +
Sbjct: 67 PYRQKGTGNARQGSIRAPQYNGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARLDQV 126
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
VV+ E P TK+ A+ GL ++ ++ E E+S RN+ + +LT
Sbjct: 127 FVVKNLI-TGEAPSTKQAKLAL--AGLSDRKNTLVVLDRDDELTERSVRNLPHVHVLTSD 183
Query: 234 TLNLFDILDAETLVLTPSTVDFLNGRY 260
LN +D+L A+ +V T S ++ G Y
Sbjct: 184 QLNTYDVLIADDIVFTESALETFLGGY 210
>gi|418719875|ref|ZP_13279074.1| 50S ribosomal protein L4 [Leptospira borgpetersenii str. UI 09149]
gi|421093607|ref|ZP_15554331.1| 50S ribosomal protein L4 [Leptospira borgpetersenii str. 200801926]
gi|410363590|gb|EKP14619.1| 50S ribosomal protein L4 [Leptospira borgpetersenii str. 200801926]
gi|410743918|gb|EKQ92660.1| 50S ribosomal protein L4 [Leptospira borgpetersenii str. UI 09149]
gi|456889408|gb|EMG00300.1| 50S ribosomal protein L4 [Leptospira borgpetersenii str. 200701203]
Length = 211
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A ++ A+ + N R G +T TR EVRGGG+KP+SQK TGRAR+GS R P GGG V
Sbjct: 30 ASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGTGRARQGSTRAPHWVGGGTVH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP+ RD+S K++ K K A+ + + A A V+E+ D K TK F + L
Sbjct: 90 GPQKRDYSYKVSSKLKHRAVLSILNKKAQASAVKVIEDLDPK--EYSTKSFDSIFKNMNL 147
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
FLV S+ V+KS RNI T+K + + ++ DIL LV+T + ++ + +Y
Sbjct: 148 RNTGVIGFLVQGESDFVKKSVRNIPTVKYINSKRISCRDILYNRNLVITEAALNEMLTQY 207
Query: 261 GVE 263
G +
Sbjct: 208 GAQ 210
>gi|433448979|ref|ZP_20411844.1| 50S ribosomal protein L4 [Weissella ceti NC36]
gi|429539368|gb|ELA07405.1| 50S ribosomal protein L4 [Weissella ceti NC36]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 4/193 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G GE L+ A + V+ A++ + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSNAGEIELNDAIFAIEPNNDVITDAVLMQRASMRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR ++ K+ KK RLA+ + ++ +VV+
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYAYKMPKKAYRLALKSVLSQKVLDSALVVVDAL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTKEFI+ + L+ +K ++ + + N ++RN+ + ++T + +N+ D+
Sbjct: 130 -TFDAPKTKEFIKVLD--NLNVNEKTLVVLDDNNTNAALAARNLNNVTVMTAKGVNVLDV 186
Query: 241 LDAETLVLTPSTV 253
++ + LV+ S +
Sbjct: 187 INNDKLVVVQSAL 199
>gi|269796254|ref|YP_003315709.1| 50S ribosomal protein L4P [Sanguibacter keddieii DSM 10542]
gi|269098439|gb|ACZ22875.1| LSU ribosomal protein L4P [Sanguibacter keddieii DSM 10542]
Length = 234
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ ++ G+K G L + T ++H+ ++ + R+GT T RGEVRGGGRK
Sbjct: 7 VDVIDAKGKKAGTADLPAEVFDVQTNIPLIHQVVVAQLAAARQGTHDTKNRGEVRGGGRK 66
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
PY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ A++ A A
Sbjct: 67 PYKQKGTGRARQGSTRAPQFAGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDRARAGRI 126
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
VV F G P TK+ + ++ L P++ ++ E KS RN + +L
Sbjct: 127 HVVTGF-GIDGSPSTKQALTSL--ANLAPRRNVLVVLERGDELTVKSLRNAEQVHLLVAD 183
Query: 234 TLNLFDILDAETLVLTPSTVD-FLNG 258
LN +D+L ++ +V T +D FL G
Sbjct: 184 QLNTYDVLVSDDVVFTKGALDAFLAG 209
>gi|1685372|gb|AAB36823.1| ribosomal protein L4 [Borrelia burgdorferi]
Length = 209
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++IG LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIGTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
K TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK K+LA + ++ AA EN+
Sbjct: 65 KHKGTGRARVGTKRNPVWIGGGIALGPKPRDYSYRLPKKVKKLAFKSVLSLRAADENSFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFS--VESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|294507052|ref|YP_003571110.1| 50S ribosomal protein L4 [Salinibacter ruber M8]
gi|294343380|emb|CBH24158.1| 50S Ribosomal protein L4 [Salinibacter ruber M8]
Length = 215
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 93 NKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKIN 152
++R+GT+ T RGEVRG GRK Y QK TG AR G ++P+R GGG G +PRD++ +N
Sbjct: 43 HQRQGTSKTKERGEVRGSGRKLYRQKGTGNARVGDAQSPIRRGGGRAHGARPRDYAHDLN 102
Query: 153 KKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212
+KEKRLA +A++ AA EN V+E F +RP T+ + G++ Q E
Sbjct: 103 QKEKRLARRSALSYKAANENIQVIENF--SLDRPDTRGLTDLFELLGVE-GQDILLATAE 159
Query: 213 VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
V V SS+N+ + + +++N DILDA+ ++L +D+L
Sbjct: 160 VEREVYLSSQNLPDVNVQEVQSINTVDILDADVVLLQEGALDWL 203
>gi|386359804|ref|YP_006058049.1| 50S ribosomal protein L4 [Thermus thermophilus JL-18]
gi|383508831|gb|AFH38263.1| 50S ribosomal protein L4, bacterial/organelle [Thermus thermophilus
JL-18]
Length = 205
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 4 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 57
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 58 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 117
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 118 LLLVEAFSGV--NGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 173
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DI+ E LV+ + R G E
Sbjct: 174 EGLNVYDIVRTERLVMDLDAWEVFQNRIGGE 204
>gi|294101629|ref|YP_003553487.1| 50S ribosomal protein L4 [Aminobacterium colombiense DSM 12261]
gi|293616609|gb|ADE56763.1| ribosomal protein L4/L1e [Aminobacterium colombiense DSM 12261]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 123/208 (59%), Gaps = 7/208 (3%)
Query: 56 ILSFTGEKIGETYL-DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKP 114
++SF GE++ + L D AAP A+ H+ ++ + N R+GT S RGEVRGGGRKP
Sbjct: 6 LVSFQGEQVSDLQLSDSVFAAPIHVPAM-HQVVVAQLANLRQGTHSCKGRGEVRGGGRKP 64
Query: 115 YSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI 174
+ QK TGRAR GS R+P+ GGGV GP PRD+S K+NKK +RLA+ +A++
Sbjct: 65 WRQKHTGRARHGSTRSPIWVGGGVAHGPSPRDYSQKVNKKVRRLALRSALSLKVRDNLLT 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
VV+ D + P TKE + + + G+ +K ++ E ++ V KS RNI + +
Sbjct: 125 VVDHID--LDTPSTKEMLGFIDKMGV---KKPLIVLHEPNDAVSKSVRNIPDARAINVGN 179
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRYGV 262
+N++D+L+ + L+LT V + Y +
Sbjct: 180 INVYDLLNYQNLILTQEAVARIEEVYSI 207
>gi|218294755|ref|ZP_03495609.1| ribosomal protein L4/L1e [Thermus aquaticus Y51MC23]
gi|218244663|gb|EED11187.1| ribosomal protein L4/L1e [Thermus aquaticus Y51MC23]
Length = 213
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 90 DMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSI 149
+ ++RRGTAST TRGEV GRK Y QK TGRAR G P+ GGG VFGPKPRD+S
Sbjct: 43 QLASRRRGTASTKTRGEVAYSGRKIYPQKHTGRARHGDIGAPIFVGGGTVFGPKPRDYSY 102
Query: 150 KINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL 209
+ KK ++ ++ A+A A ++VE F G + KT+EF+ + GLD + T L
Sbjct: 103 TLPKKVRKAGLAMAVADRAKEGKLLLVEAFLGV--QGKTREFLAWAKEVGLDGSE--TVL 158
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
++ E V +++RN+ + L P LN++DIL LV+ + R G E
Sbjct: 159 LVTADEAVRRAARNLPWVVTLAPEGLNVYDILRTGRLVMDLKAWEVFQERLGGE 212
>gi|406947659|gb|EKD78551.1| hypothetical protein ACD_41C00327G0002 [uncultured bacterium]
Length = 219
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 9/208 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + TG+ +GE L + + A+VH+ ++ N R A T T+GEVRGGGRK
Sbjct: 4 VKVYNLTGQVVGEQTLPERLFSVKVKPALVHQVVVATQANSREVLAHTKTKGEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGGVVFGP+ R++S K+NK+ K+ A++ ++ A +
Sbjct: 64 PWKQKGTGRARQGSIRNPQWRGGGVVFGPRSNRNFSQKVNKRMKQSALAMVLSDKVANDK 123
Query: 173 TIVVEEFD-----GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGT 226
IVV+ F G KTK+ A+ L + L M ++ NV ++++N+
Sbjct: 124 IIVVDSFTASAGGGSAFGGKTKQLKTALS--SLPCANHTSLLAMATADANVTRAAQNVAK 181
Query: 227 LKMLTPRTLNLFDILDAETLVLTPSTVD 254
L ++N+ D+L E +VL + V+
Sbjct: 182 LGYCAADSINVVDLLKYEYVVLDQAAVE 209
>gi|374263360|ref|ZP_09621908.1| 50S ribosomal protein L4 [Legionella drancourtii LLAP12]
gi|363535950|gb|EHL29396.1| 50S ribosomal protein L4 [Legionella drancourtii LLAP12]
Length = 201
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+A++T M N R G ++ TR EVRGGGRKP++QK TGRAR G+ R+P+ GGV F
Sbjct: 27 LIHQAVVTFMNNARSGNSAQKTRSEVRGGGRKPWNQKGTGRARAGTIRSPIWRSGGVTFA 86
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
K RD+S KINKK + A+ + I+ N IV+ +F + E KTK+F+ M + ++
Sbjct: 87 SKKRDYSQKINKKMYKRALRSIISELCRTGNLIVISDF--QCESKKTKDFVSKMSQLEIN 144
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
A ++ EV EN SRN+ + TL+ +L E +V+T + +
Sbjct: 145 ---NALIVMSEVGENEYFGSRNLIDFDICDVATLDPVSLLRFEKVVVTEAAI 193
>gi|257431697|ref|ZP_05608060.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
E1410]
gi|257282576|gb|EEV12708.1| 50S ribosomal protein L4 [Staphylococcus aureus subsp. aureus
E1410]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L + +V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ +
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENGLTL 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F+ FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDAFN--FEAPKTKEFKNVLST--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ DI +A++LV+T
Sbjct: 182 NVLDITNADSLVIT 195
>gi|399924274|ref|ZP_10781632.1| 50S ribosomal protein L4 [Peptoniphilus rhinitidis 1-13]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 75 APDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRP 134
AP + AV + + + N+R+GT S TR EVRGGGRKP+ QK TGRAR+GS R+P
Sbjct: 26 APVSTHAV-YLVVKNILANQRQGTHSAKTRAEVRGGGRKPWRQKGTGRARQGSIRSPQWR 84
Query: 135 GGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEA 194
GGGVVF KPRD+S KK +R+A+ + + S I+V++F+ E KTK F
Sbjct: 85 GGGVVFAKKPRDYSYTTPKKTRRVALKSVLTSKFQDGEMILVDKFE--MEEAKTKIFANI 142
Query: 195 MRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
++ ++ + K ++ + +V++++RNI +K +N++D+L + LV++ S +D
Sbjct: 143 LK--DINAQGKTLVVLNDDERDVQRAARNIAGVKTSRATDINVYDLLKYDNLVISKSALD 200
Query: 255 FL 256
+
Sbjct: 201 VV 202
>gi|325108616|ref|YP_004269684.1| 50S ribosomal protein L4P [Planctomyces brasiliensis DSM 5305]
gi|324968884|gb|ADY59662.1| LSU ribosomal protein L4P [Planctomyces brasiliensis DSM 5305]
Length = 217
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + G ++G D A + ++H ++ N+R GT +T +R +V G +K
Sbjct: 4 VPVYNQQGSEVGTYEFDPTELASGVNKQLLHDVVVMYEANRRVGTFATKSRADVAGSKKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
Y QK TG AR G R+P+R GGG F PRD+S ++ KK RLA A+ S +
Sbjct: 64 MYRQKGTGNARAGGKRSPIRRGGGHTFAKTPRDFSYRLPKKAIRLATRMAVLSKFQDDQI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE-NVEKSSRNIGTLKMLTP 232
V++ D KF PKTK+ + G++P + T L ++ + NV KS+RN+ L++
Sbjct: 124 KVID--DVKFSEPKTKQVTGMFSQLGVEPSK--TLLAIDAHDTNVWKSARNVAGLRVTPS 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGR 259
LN +D+L LV+T S +D L G+
Sbjct: 180 VGLNAYDVLHQRMLVVTTSALDRLRGK 206
>gi|326799128|ref|YP_004316947.1| 50S ribosomal protein L4 [Sphingobacterium sp. 21]
gi|326549892|gb|ADZ78277.1| ribosomal protein L4/L1e [Sphingobacterium sp. 21]
Length = 209
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK + QK TG AR GS ++PL GGG +FGP+PRD+S K
Sbjct: 41 LANQRQGTHKSKQRNEIAGSTRKLHKQKGTGGARAGSIKSPLFNGGGRIFGPQPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A N +V++E + F+ KTK +++ + L+ + T LV
Sbjct: 101 LNKKLKALARKSALSYKAQENNIVVLDEVN--FDSIKTKNYVKLVN--DLNVANEKTLLV 156
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ +++NV SSRN+ K++T +N +D+L+A L+LT TV L
Sbjct: 157 LPALNKNVYLSSRNLKKTKVITAADINTYDVLNAGKLLLTTETVKTL 203
>gi|260558288|ref|ZP_05830484.1| ribosomal protein L4 [Enterococcus faecium C68]
gi|430820843|ref|ZP_19439464.1| 50S ribosomal protein L4 [Enterococcus faecium E0045]
gi|430826442|ref|ZP_19444625.1| 50S ribosomal protein L4 [Enterococcus faecium E0164]
gi|430890749|ref|ZP_19484439.1| 50S ribosomal protein L4 [Enterococcus faecium E1575]
gi|260075462|gb|EEW63768.1| ribosomal protein L4 [Enterococcus faecium C68]
gi|430439103|gb|ELA49481.1| 50S ribosomal protein L4 [Enterococcus faecium E0045]
gi|430445069|gb|ELA54856.1| 50S ribosomal protein L4 [Enterococcus faecium E0164]
gi|430555797|gb|ELA95326.1| 50S ribosomal protein L4 [Enterococcus faecium E1575]
Length = 207
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A++ + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGEITLNEEIFGIEPNESVVYDAIVMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A N + +E
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAENNLVAIEGL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
KF+ PKTKEF + + +D K +V+E + S+RN+ + ++T +++ D
Sbjct: 130 -KFDAPKTKEFKQVLANLSIDSK---VLVVLEKGNDFAALSARNLPNVSVVTSDNVSVLD 185
Query: 240 ILDAETLVLTPST 252
++ + T VL T
Sbjct: 186 VV-SNTKVLATQT 197
>gi|373953751|ref|ZP_09613711.1| ribosomal protein L4/L1e [Mucilaginibacter paludis DSM 18603]
gi|373890351|gb|EHQ26248.1| ribosomal protein L4/L1e [Mucilaginibacter paludis DSM 18603]
Length = 208
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK Y QK TG AR GS ++PL GGG VFGP+PRD+S K
Sbjct: 41 LANQRQGTHKSKQRNEIAGSTRKLYKQKGTGGARAGSIKSPLFNGGGRVFGPQPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K+LA +A+ S A +N+IVV E D F+ KTK +I+ + L ++ T LV
Sbjct: 101 LNKKLKQLARKSAL-SYKALDNSIVVLE-DFTFDAVKTKTYIQFVADLNLSDEK--TLLV 156
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
+ + N+ SSRN+ K++T L+ +D+L+A L+LT +V L
Sbjct: 157 LPSANNNIYLSSRNLKKSKVITADQLSTYDVLNAGKLLLTTDSVKTL 203
>gi|260102356|ref|ZP_05752593.1| 50S ribosomal protein L4 [Lactobacillus helveticus DSM 20075]
gi|417013795|ref|ZP_11946705.1| 50S ribosomal protein L4 [Lactobacillus helveticus MTCC 5463]
gi|260083800|gb|EEW67920.1| 50S ribosomal protein L4 [Lactobacillus helveticus DSM 20075]
gi|328463365|gb|EGF35038.1| 50S ribosomal protein L4 [Lactobacillus helveticus MTCC 5463]
Length = 205
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 111/200 (55%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ GE L+ K + +VV A+I KR+GT+ R VRGGG+K
Sbjct: 4 LKVMDQNGKDSGEVTLNDKVFGIEPNESVVFEAIIRQRAGKRQGTSKVKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ + +K++RLAI + ++ ++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYTMPRKQRRLAIKSVLSQKMIDKDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTK+ + + +D K L++ NV+ S+RN+ +K +
Sbjct: 124 IVLDKL--AMSAPKTKDLVSMLNSLNVDGK----VLIVSDDNNVQLSARNLAKVKAVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ L+LT V
Sbjct: 178 GLNVEDAVNYGKLILTQDAV 197
>gi|345850549|ref|ZP_08803544.1| 50S ribosomal protein L4 [Streptomyces zinciresistens K42]
gi|345638030|gb|EGX59542.1| 50S ribosomal protein L4 [Streptomyces zinciresistens K42]
Length = 218
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 120/220 (54%), Gaps = 11/220 (5%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVV---HRALITDMQNKRRGTASTLTRGEVR 108
S + ILS GEK G ++L + D + V H+ ++ + R+GT T TRGEVR
Sbjct: 2 STVDILSPAGEKAGS--VELPAEIFDVEKVSVPLLHQVVVAQLAAARQGTHKTKTRGEVR 59
Query: 109 GGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAA 168
GGGRKPY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ A+
Sbjct: 60 GGGRKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRHALTD-R 118
Query: 169 AAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTL 227
A N I V + E P TK A +G ++K LV+E E S+RN+ +
Sbjct: 119 ARNNRIHVVSGVIEGETPSTK---SAKSLFGKISERKNLLLVVERADEAAWLSARNLPQV 175
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEG 266
+L P LN +D+L ++ +V T + + F++G + EG
Sbjct: 176 HILEPGQLNTYDVLVSDDVVFTQAAFESFVSGPKAADTEG 215
>gi|213962804|ref|ZP_03391064.1| ribosomal protein L4/L1 family protein [Capnocytophaga sputigena
Capno]
gi|213954461|gb|EEB65783.1| ribosomal protein L4/L1 family protein [Capnocytophaga sputigena
Capno]
Length = 209
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FG
Sbjct: 32 VVYLDVKRYLANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+P+D++ K+ K KRLA +A+++ + +VVE+ + F+ PKTK+F ++ GL+
Sbjct: 92 PRPKDYTQKLTKNVKRLARRSALSAKVQNQALVVVEDLN--FDAPKTKDFTAVVKSLGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K K+ F++ + NV SSRN+ T ++T LN + +++A +VLT S+V L
Sbjct: 150 NK-KSIFVLPNTNNNVYLSSRNVPTSSVVTASELNTYQLVNASNVVLTESSVAVL 203
>gi|363890335|ref|ZP_09317673.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM5]
gi|361965779|gb|EHL18750.1| 50S ribosomal protein L4 [Eubacteriaceae bacterium CM5]
Length = 160
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ +L G + + + A + V+ + + N+R+GT S TR EVRGGGRK
Sbjct: 4 IDVLDINGNVVEQMEISEDIFAVEINEHCVYETVKNHLANRRQGTQSAKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGGVVF PKPRD+S KINKK KR+A+ + + +
Sbjct: 64 PWRQKGTGRARQGSTRSPQWIGGGVVFAPKPRDYSYKINKKVKRIALKSVLTDKVNNQKL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKA 206
IV+ E PKTK F + M+ +D K+ A
Sbjct: 124 IVLNELT--MNEPKTKVFAQTMKNLKIDGKKSA 154
>gi|381191148|ref|ZP_09898659.1| 50S ribosomal protein L4 [Thermus sp. RL]
gi|62287203|sp|Q5SHN9.1|RL4_THET8 RecName: Full=50S ribosomal protein L4; AltName: Full=L1e
gi|116668237|pdb|2J01|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4).
This File Contains The 50s Subunit From Molecule I.
gi|116668298|pdb|2J03|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4).
This File Contains The 50s Subunit From Molecule Ii.
gi|119389738|pdb|2HGJ|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgi.
gi|119389795|pdb|2HGQ|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgp.
gi|119389851|pdb|2HGU|F Chain F, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgr.
gi|157836524|pdb|2V47|F Chain F, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 2 Of 4). This File Contains The 50s
Subunit For Molecule 1.
gi|157836580|pdb|2V49|F Chain F, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 4 Of 4). This File Contains The 50s
Subunit Of Molecule 2.
gi|226887439|pdb|2WDI|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule I.
gi|226887471|pdb|2WDJ|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule Ii.
gi|226887528|pdb|2WDL|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule I.
gi|226887585|pdb|2WDN|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule Ii.
gi|237823569|pdb|2WH2|F Chain F, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823628|pdb|2WH4|F Chain F, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|260100015|pdb|3HUX|F Chain F, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule I.
gi|260100071|pdb|3HUZ|F Chain F, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule Ii.
gi|261824524|pdb|2WRJ|F Chain F, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 2 Of 4).
gi|261824586|pdb|2WRL|F Chain F, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State. (Part 4 Of
4).
gi|261824649|pdb|2WRO|F Chain F, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 2 Of 4).
gi|261824708|pdb|2WRR|F Chain F, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 4 Of 4).
gi|281307196|pdb|3KIR|F Chain F, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 2 Of 4)
gi|281307254|pdb|3KIT|F Chain F, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 4 Of 4)
gi|281307312|pdb|3KIW|F Chain F, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 2 Of 4)
gi|281307370|pdb|3KIY|F Chain F, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 4 Of 4)
gi|288965634|pdb|3KNI|F Chain F, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule I
gi|288965666|pdb|3KNK|F Chain F, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule Ii.
gi|288965698|pdb|3KNM|F Chain F, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule I.
gi|288965730|pdb|3KNO|F Chain F, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule Ii
gi|294979478|pdb|3I8F|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979558|pdb|3I8I|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979616|pdb|3I9C|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B.
The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979670|pdb|3I9E|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A.
The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982115|pdb|2X9S|F Chain F, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982174|pdb|2X9U|F Chain F, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307568002|pdb|2XG0|F Chain F, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 2 Of 4)
gi|307568060|pdb|2XG2|F Chain F, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 4 Of 4)
gi|309320290|pdb|3OH5|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320320|pdb|3OH7|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320392|pdb|3OHJ|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320422|pdb|3OHK|F Chain F, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320473|pdb|3OHZ|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320524|pdb|3OI1|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320575|pdb|3OI3|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320626|pdb|3OI5|F Chain F, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207714|pdb|2XQE|F Chain F, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754038|pdb|2XTG|F Chain F, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754096|pdb|2XUX|F Chain F, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533443|pdb|2Y0V|F Chain F, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533502|pdb|2Y0X|F Chain F, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533561|pdb|2Y0Z|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533620|pdb|2Y11|F Chain F, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533679|pdb|2Y13|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533738|pdb|2Y15|F Chain F, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533797|pdb|2Y17|F Chain F, Ef-Tu Complex 3
gi|325533856|pdb|2Y19|F Chain F, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948834|pdb|3ZVP|F Chain F, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|380764373|pdb|3UYE|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764430|pdb|3UYG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764464|pdb|3UZ1|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin
gi|380764494|pdb|3UZ2|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764626|pdb|3UZ8|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764656|pdb|3UZ9|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764690|pdb|3UZF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764746|pdb|3UZH|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex.
gi|380764802|pdb|3UZK|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764883|pdb|3UZN|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353129|pdb|4ABS|F Chain F, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353220|pdb|4DHA|F Chain F, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353274|pdb|4DHC|F Chain F, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325969|pdb|3V23|F Chain F, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326022|pdb|3V25|F Chain F, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 2nd Ribosome In The Asu
gi|388326075|pdb|3V27|F Chain F, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326198|pdb|3V29|F Chain F, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Entry Contains The 50s Subunit Of The 2nd Molecule In
The Asu.
gi|388326251|pdb|3V2D|F Chain F, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326304|pdb|3V2F|F Chain F, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 2nd Ribosome In The Asu
gi|451928716|pdb|4G5L|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 50s Subunit Of Molecule A.
gi|451928769|pdb|4G5N|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 50s Subunit Of Molecule B.
gi|451928823|pdb|4G5U|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 50s Subunit Of Molecule A.
gi|451928877|pdb|4G5W|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 50s Subunit Of Molecule B.
gi|55773073|dbj|BAD71514.1| 50S ribosomal protein L4 [Thermus thermophilus HB8]
gi|380450937|gb|EIA38550.1| 50S ribosomal protein L4 [Thermus sp. RL]
Length = 210
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 9 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 63 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 123 LLLVEAFAGV--NGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 178
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DI+ E LV+ + R G E
Sbjct: 179 EGLNVYDIVRTERLVMDLDAWEVFQNRIGGE 209
>gi|330997364|ref|ZP_08321215.1| 50S ribosomal protein L4 [Paraprevotella xylaniphila YIT 11841]
gi|329570738|gb|EGG52454.1| 50S ribosomal protein L4 [Paraprevotella xylaniphila YIT 11841]
Length = 209
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 8/207 (3%)
Query: 54 LPILSFTGEKIGETYL---DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+ +L+ GE G L + + P+ V++ + + N+R+GTA + R EV G
Sbjct: 3 VSVLNIKGEDTGRKVLLNDSIFNIEPNDH--VIYLDVKQYLANQRQGTAKSKERSEVSGS 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
RK QK G ARRG +P+ GGG VFGPKPRD+ K+NKK K LA +A+ S A
Sbjct: 61 TRKLGRQKGGGGARRGDINSPVLVGGGRVFGPKPRDYGFKLNKKVKVLARKSAL-SYKAK 119
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
EN IVV E D E PKTK+FIE + + K KA F++ ++NV S+RNI + ++
Sbjct: 120 ENAIVVVE-DFTMEVPKTKQFIEIINNLKVGGK-KALFVLPGANKNVYLSARNIERVNVM 177
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFLN 257
T LN + +L+A+ +V+T +++ ++
Sbjct: 178 TAAALNTYKVLNADVMVVTENSLKVVD 204
>gi|209156522|pdb|3D5B|F Chain F, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156576|pdb|3D5D|F Chain F, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766799|pdb|3F1F|F Chain F, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes As Described In
Remark 400.
gi|218766855|pdb|3F1H|F Chain F, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes As
Described In Remark 400
Length = 210
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 9 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 63 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 123 LLLVEAFAGV--NGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 178
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DI+ E LV+ + R G E
Sbjct: 179 EGLNVYDIVRTERLVMDLDAWEVFQNRIGGE 209
>gi|256831828|ref|YP_003160555.1| 50S ribosomal protein L4 [Jonesia denitrificans DSM 20603]
gi|256685359|gb|ACV08252.1| ribosomal protein L4/L1e [Jonesia denitrificans DSM 20603]
Length = 228
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 121/217 (55%), Gaps = 17/217 (7%)
Query: 54 LPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVR 108
+ IL TG K G+ L D+ P ++H+ ++ R+GT +T TR +V
Sbjct: 7 VDILDATGNKTGDAVLPAEIFDVALNVP-----LIHQVVVAQQAAARQGTHATKTRAQVS 61
Query: 109 GGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAA 168
GGGRKPY QK TGRAR+GS R P GGGVV GP+PRD+S + KK K A+ +A++ A
Sbjct: 62 GGGRKPYKQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRSALSDRA 121
Query: 169 AAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQ----KATFLVMEVSENVE-KSSRN 223
A V++ F G E P TK + A+ L + K +V E ++ + KS RN
Sbjct: 122 RAGRIHVIDSF-GVTEAPSTKGALSALSSLKLSKENFGDVKHVLVVHERNDEITIKSLRN 180
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNGR 259
I ++ ++T LN +D+L ++ +V T + +D FL GR
Sbjct: 181 IESVHLITADQLNTYDVLLSDDVVFTKAALDGFLAGR 217
>gi|421145787|ref|ZP_15605625.1| 50S ribosomal protein L4, partial [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487825|gb|EJG08742.1| 50S ribosomal protein L4, partial [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 161
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 99 ASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRL 158
+ST TR VRGGGRKP+ QK TGRAR+GS R P GGGV FGP PR + K+NKK + L
Sbjct: 1 SSTKTRAMVRGGGRKPFKQKGTGRARQGSIRAPHMVGGGVTFGPHPRSYEKKVNKKVRNL 60
Query: 159 AISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--N 216
A+ +A+++ AA N +V+ ++DG E PKTK + + + +D KQK F+V ++ + N
Sbjct: 61 ALRSALSAKVAAGNVLVL-DYDG-IETPKTKVIVNLVNK--VDAKQKQLFVVGDLIKDYN 116
Query: 217 VEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
+ S+RN+ +L P + ++ +L E ++LT
Sbjct: 117 LYLSARNLENAVILQPNEIGVYWLLKQEKVILT 149
>gi|315640160|ref|ZP_07895282.1| 50S ribosomal protein L4 [Enterococcus italicus DSM 15952]
gi|315484137|gb|EFU74611.1| 50S ribosomal protein L4 [Enterococcus italicus DSM 15952]
Length = 207
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV A+I + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGEITLNEEIFGIEPNESVVFDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A+ N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVASNNLVAVEALS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSEN-VEKSSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + V S+RN+ + +++ +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLSIDAK---VLVVLEEGNDFVALSARNLPNVSVVSADNVSVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ ++ T + +
Sbjct: 186 VVSNNKVLATQTAL 199
>gi|116334268|ref|YP_795795.1| 50S ribosomal protein L4 [Lactobacillus brevis ATCC 367]
gi|122269050|sp|Q03PV8.1|RL4_LACBA RecName: Full=50S ribosomal protein L4
gi|116099615|gb|ABJ64764.1| LSU ribosomal protein L4P [Lactobacillus brevis ATCC 367]
Length = 207
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 8/170 (4%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV ++ + R+GT + R VRGGG+KP+ QK TGRAR+GS R+P GGGVVFG
Sbjct: 32 VVFDTILMQRASLRQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWVGGGVVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR +S ++ KK RLA+ + ++ E+ +VV+ F+ PKTKEF + GL+
Sbjct: 92 PTPRSYSYRLPKKVSRLALKSVLSQKVLDESFVVVDGL--AFDAPKTKEFAAVLA--GLN 147
Query: 202 PKQKATFLVMEVSENVEK--SSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
K T +V+E +NV ++RN+ +K++ + LN+ DI DA+ LV+T
Sbjct: 148 VTTK-TLVVLE-DDNVTAALAARNLTNVKVIPAKGLNVLDIADADKLVIT 195
>gi|46199629|ref|YP_005296.1| 50S ribosomal protein L4 [Thermus thermophilus HB27]
gi|161986604|ref|YP_144957.2| 50S ribosomal protein L4 [Thermus thermophilus HB8]
gi|384431871|ref|YP_005641231.1| 50S ribosomal protein L4 [Thermus thermophilus SG0.5JP17-16]
gi|81567621|sp|Q72I05.1|RL4_THET2 RecName: Full=50S ribosomal protein L4
gi|149240889|pdb|1VSA|D Chain D, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
Subunit Is In The File 2ow8
gi|160285431|pdb|1VSP|D Chain D, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 1vsp, Contains The 50s
Ribosome Subunit. 30s Ribosome Subunit Is In The File
2qnh
gi|300508633|pdb|3MRZ|E Chain E, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms0.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (50s) And 3ms1 (30s).
gi|300508688|pdb|3MS1|E Chain E, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3mr8.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|46197255|gb|AAS81669.1| LSU ribosomal protein L1E [Thermus thermophilus HB27]
gi|333967339|gb|AEG34104.1| ribosomal protein L4/L1e [Thermus thermophilus SG0.5JP17-16]
Length = 205
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 4 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 57
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 58 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 117
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 118 LLLVEAFAGV--NGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 173
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DI+ E LV+ + R G E
Sbjct: 174 EGLNVYDIVRTERLVMDLDAWEVFQNRIGGE 204
>gi|374074449|pdb|3UXQ|F Chain F, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074479|pdb|3UXR|F Chain F, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes
Length = 205
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 4 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 57
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 58 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 117
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 118 LLLVEAFAGV--NGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 173
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
LN++DI+ E LV+ + R G E
Sbjct: 174 EGLNVYDIVRTERLVMDLDAWEVFQNRIGGE 204
>gi|256819983|ref|YP_003141262.1| 50S ribosomal protein L4 [Capnocytophaga ochracea DSM 7271]
gi|256581566|gb|ACU92701.1| ribosomal protein L4/L1e [Capnocytophaga ochracea DSM 7271]
Length = 209
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FG
Sbjct: 32 VVYLDVKRYLANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+P+D++ K+ K KRLA +A+++ + +VVE+ + F+ PKTK+F ++ GL+
Sbjct: 92 PRPKDYTQKLTKNVKRLARRSALSAKVQNQALVVVEDLN--FDAPKTKDFTAVVKSLGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K K+ F++ + NV SSRN+ T ++T LN + +++A +VLT S+V L
Sbjct: 150 NK-KSLFVLPNTNNNVYLSSRNVPTSSVVTASELNTYQLVNASNVVLTESSVAVL 203
>gi|117924156|ref|YP_864773.1| 50S ribosomal protein L4P [Magnetococcus marinus MC-1]
gi|166234681|sp|A0L5X4.1|RL4_MAGSM RecName: Full=50S ribosomal protein L4
gi|117607912|gb|ABK43367.1| LSU ribosomal protein L4P [Magnetococcus marinus MC-1]
Length = 207
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 6/169 (3%)
Query: 86 ALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR 145
A+ + +R GTA+ L R +VRGGG+KPY QK TG AR+G+ R P GG+VFGP+ R
Sbjct: 36 AVNYQLAKRRLGTATVLGRSDVRGGGKKPYRQKGTGNARQGTIRAPQFRTGGIVFGPQQR 95
Query: 146 DWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQK 205
D+S K+NKK ++LA+ TA++ A++E +VV++ + KTKE + G +
Sbjct: 96 DYSHKLNKKVRKLALQTALSVKASSEEMVVVDKLE--LASIKTKEMKALLSTLG---AAR 150
Query: 206 ATFLVM-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+TFLV+ E+S + S+RNI + + +N++D+L E LV+T V
Sbjct: 151 STFLVVKELSNEIVLSARNIPNVMVADVDGVNVYDLLRYEKLVITEEAV 199
>gi|377822478|ref|YP_005175404.1| 50S ribosomal protein L4 [Mycoplasma pneumoniae 309]
gi|385326765|ref|YP_005881197.1| 50S ribosomal protein L4 [Mycoplasma pneumoniae FH]
gi|301633449|gb|ADK87003.1| 50S ribosomal protein L4 [Mycoplasma pneumoniae FH]
gi|358640446|dbj|BAL21740.1| 50S ribosomal protein L4 [Mycoplasma pneumoniae 309]
Length = 212
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Query: 83 VHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGP 142
V A++ + + R+GT S LT+GEVRGGG+KPY QK TG+AR+GS R P GGG+VFGP
Sbjct: 34 VFDAVLVEQASWRQGTHSILTKGEVRGGGKKPYKQKHTGKARQGSTRNPHFVGGGIVFGP 93
Query: 143 KP-RDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
KP R++S+K+NKK A+ T + A++NT +V++ KTK ++ ++ L
Sbjct: 94 KPNRNYSLKLNKKAHTAALHTVWSEKLASDNTHLVDQNLFNKTEGKTKVMVQFLKSAKLL 153
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
K F+V ++ N+E+S+ NI +++ +++ D++ A L++ + L G++
Sbjct: 154 DKN-VLFVVNTLNTNLEQSTSNIKNVQVKHLDKVSVRDLMLANALLVEKEVLKALEGKF 211
>gi|224532312|ref|ZP_03672944.1| 50S ribosomal protein L4 [Borrelia valaisiana VS116]
gi|224511777|gb|EEF82183.1| 50S ribosomal protein L4 [Borrelia valaisiana VS116]
Length = 209
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++I LD + + + ++ A+ ++ N R GT+ST TR EV+G +KP+
Sbjct: 5 VFSKDGKEIRTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVKGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ AA EN
Sbjct: 65 KQKGTGRARVGTKRNPIWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRAADENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFN--IESGKTKDLALIIKNFA-SLNGKVVILLGNDDQMIKRAGKNIRDLKVLSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|90962405|ref|YP_536321.1| 50S ribosomal protein L4 [Lactobacillus salivarius UCC118]
gi|227891545|ref|ZP_04009350.1| 50S ribosomal protein L4 [Lactobacillus salivarius ATCC 11741]
gi|301300211|ref|ZP_07206423.1| 50S ribosomal protein L4 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|385840909|ref|YP_005864233.1| 50S ribosomal protein L4 [Lactobacillus salivarius CECT 5713]
gi|417809710|ref|ZP_12456391.1| 50S ribosomal protein L4 [Lactobacillus salivarius GJ-24]
gi|418960953|ref|ZP_13512840.1| 50S ribosomal protein L4 [Lactobacillus salivarius SMXD51]
gi|122448605|sp|Q1WS91.1|RL4_LACS1 RecName: Full=50S ribosomal protein L4
gi|90821599|gb|ABE00238.1| LSU ribosomal protein L1E [Lactobacillus salivarius UCC118]
gi|227866692|gb|EEJ74113.1| 50S ribosomal protein L4 [Lactobacillus salivarius ATCC 11741]
gi|300215030|gb|ADJ79446.1| 50S ribosomal protein L4 [Lactobacillus salivarius CECT 5713]
gi|300852152|gb|EFK79824.1| 50S ribosomal protein L4 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|335350634|gb|EGM52130.1| 50S ribosomal protein L4 [Lactobacillus salivarius GJ-24]
gi|380344620|gb|EIA32966.1| 50S ribosomal protein L4 [Lactobacillus salivarius SMXD51]
Length = 207
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + VV A+I + R+GT + R VRGGG+KP+ QK T
Sbjct: 11 GNQNGEVQLNEAIFGIEPNNNVVFDAVIMQRASLRQGTHAVKNRSAVRGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG VFGP PR +S K+ +K +RLAI + ++ A E+ +VV+ +
Sbjct: 71 GRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVADESLVVVDALN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
F+ PKTK F E + L+ K ++ + + ++RN+ + ++ + LN+ D+
Sbjct: 131 --FDAPKTKAFAEVLS--NLNVNSKVLVVLEDDNTTAALAARNLKNVTVIPAKGLNVLDV 186
Query: 241 LDAETLVLT 249
++ + LV+T
Sbjct: 187 INNDKLVIT 195
>gi|392373624|ref|YP_003205457.1| 50S ribosomal protein L4 [Candidatus Methylomirabilis oxyfera]
gi|258591317|emb|CBE67616.1| 50S ribosomal subunit protein L4 [Candidatus Methylomirabilis
oxyfera]
Length = 211
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 6/174 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + + N+R+GTAST R EVRGGG+KP+ QK TGRAR G+ R+PL GGG VFG
Sbjct: 33 LMHDVVRMQLANRRQGTASTRRRSEVRGGGKKPWKQKGTGRARSGTRRSPLWRGGGTVFG 92
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PR ++ +I ++ + A+ TA++ A +VV+ P TK F + R G+
Sbjct: 93 PQPRSYAYEIPRQVRASALRTALSEKVRAGQFVVVDGLS--LAEPSTKAFKALLTRLGV- 149
Query: 202 PKQKATFLVMEVSEN--VEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ +A F+ +V ++ V S RN+ + ++ LN++DIL +TL++T V
Sbjct: 150 -QGRALFVTDQVHQDDAVSMSCRNLPDVTLVPTAGLNVYDILRHDTLIMTKGAV 202
>gi|119953268|ref|YP_945477.1| 50S ribosomal protein L4 [Borrelia turicatae 91E135]
gi|119862039|gb|AAX17807.1| LSU ribosomal protein L1E [Borrelia turicatae 91E135]
Length = 222
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Query: 77 DTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGG 136
D + ++ A+ ++ N R GTAST TR EVRG +KP+ QK TGRAR G+ R P+ GG
Sbjct: 39 DISYGSIYNAINNELANLRVGTASTKTRSEVRGSSKKPWKQKGTGRARVGTKRNPVWVGG 98
Query: 137 GVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI-VVEEFDGKFERPKTKEFIEAM 195
GV GPKPRD+S K+ KK KRLA + ++ + E+ + +VE F E KTK+ M
Sbjct: 99 GVALGPKPRDYSYKLPKKVKRLAFRSVLSLCVSVEDRLKIVENFT--IESGKTKDLALIM 156
Query: 196 RRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDF 255
+ + + K L+ + V+++ +NI LK+L+ L + D+ A+ L+ S ++
Sbjct: 157 KNF-IKINGKTVILLGNDDQMVKRAGKNIRDLKILSFNRLRVVDLFYAKNLIALESAING 215
Query: 256 LNGRY 260
LN Y
Sbjct: 216 LNELY 220
>gi|374852155|dbj|BAL55095.1| 50S ribosomal protein L4 [uncultured Bacteroidetes bacterium]
Length = 217
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + TGE+ G L + ++ A+ + ++R+GT T TR EVRGGGRK
Sbjct: 3 VPLYTQTGEQRGTIELPDAVFNIEPHEHAMYLAVRVYLAHQRQGTHKTKTRQEVRGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK G AR GS R+PL GGG VFGP+P ++I I KK +LA +A++ A N
Sbjct: 63 PWRQKGRGTARAGSIRSPLWVGGGTVFGPQPHKYTIAIPKKVNQLARRSALSCRAREGNI 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+ + E+PKTK M+ GL+ LV + V ++ RN+ L M+
Sbjct: 123 IVVDGIE--LEQPKTKLMAGVMKALGLE-GTSTLMLVDAFNPTVLRAGRNLPYLDMMLAD 179
Query: 234 TLNLFDILDAETLVLTPSTVDFLN 257
++ + IL L+L P +D L
Sbjct: 180 KVSAYHILSHRKLLLVPGAIDMLT 203
>gi|422867117|ref|ZP_16913719.1| 50S ribosomal protein L4 [Enterococcus faecalis TX1467]
gi|329577748|gb|EGG59174.1| 50S ribosomal protein L4 [Enterococcus faecalis TX1467]
Length = 188
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
+VV+ A+I + R+GT + R VRGGGRKP+ QK TGRAR+GS R+P GGGVVF
Sbjct: 12 SVVYDAIIMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVF 71
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP PR +S K+ KK +RLA+ + ++ A N + VE F+ PKTKEF + + +
Sbjct: 72 GPTPRSYSYKLPKKVRRLAMKSVLSDKVAENNLVAVEGLS--FDAPKTKEFKQVLANLSI 129
Query: 201 DPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
D K +V+E + S+RN+ + ++T +++ D++ A ++ T + +
Sbjct: 130 DTK---VLVVLENGNDFAALSARNLPNVSVVTSDNVSVLDVVSANKVLATQTAL 180
>gi|406900297|gb|EKD43310.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G++ GE L + +VH+ + N+R A T RGEV GGG+K
Sbjct: 3 IKVYNLAGKETGEMELSDEVFGVKIKPELVHQVFVQQTNNQREPWADTKNRGEVSGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGP-KPRDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR GS R+P+ GGGV FGP R++ KINKK ++ AI +A A + N
Sbjct: 63 PWQQKGTGRARHGSIRSPIWKGGGVAFGPLTDRNYKTKINKKTRQAAIKMCLADKAQSGN 122
Query: 173 TIVVEEFDGKFERPKTKEF---IEAMRRWGLDPKQKATFLVM--EVSENVEKSSRNIGTL 227
+VVE+F KF PKTK F ++AM P + FLV+ + ++V + ++N+ +
Sbjct: 123 LLVVEDF--KFADPKTKLFASVVKAM------PTKLKNFLVLTSDQDKDVLRMTKNLQKV 174
Query: 228 KMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYG 261
K L + N+ D+L ++ + + + L +G
Sbjct: 175 KTLRAQDSNVMDLLKKGVVLTSKAGIKKLEEVFG 208
>gi|386841880|ref|YP_006246938.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374102181|gb|AEY91065.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451795174|gb|AGF65223.1| 50S ribosomal protein L4 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 217
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 119/222 (53%), Gaps = 16/222 (7%)
Query: 52 SPLPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGE 106
S + ILS GEK G L D K + P ++H+ ++ + R+GT T TRGE
Sbjct: 2 STVDILSPAGEKAGSVELPAEIFDAKVSVP-----LIHQVVVAQLAAARQGTHKTKTRGE 56
Query: 107 VRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIAS 166
VRGGG+KPY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ A+
Sbjct: 57 VRGGGKKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALTD 116
Query: 167 AAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIG 225
A N I V + E P TK A +G ++K LV++ E S+RN+
Sbjct: 117 -RARHNRIHVVSGVVEGENPSTK---AAKSLFGKISERKNLLLVVDRADEAAWLSARNLP 172
Query: 226 TLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEG 266
+ +L P LN +D+L ++ +V T + + F+ G + EG
Sbjct: 173 QVHILEPGQLNTYDVLVSDDVVFTQAAFESFVAGPKANDTEG 214
>gi|357041873|ref|ZP_09103581.1| 50S ribosomal protein L4 [Prevotella histicola F0411]
gi|355370213|gb|EHG17600.1| 50S ribosomal protein L4 [Prevotella histicola F0411]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V++ A+ + +R+GTA + R E G RK QK G ARRG +P+ GGG VFG
Sbjct: 32 VLYLAVKQYLAAQRQGTAKSKERSEHAGSTRKLGRQKGGGGARRGDINSPVLVGGGRVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S K+NKK K LA +A+A A + +VVE+F+ E PKTK+F+ + +D
Sbjct: 92 PKPRDYSFKLNKKVKTLARKSALAYKAQENSIVVVEDFN--LEAPKTKDFVNIAKNLKVD 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
K K ++ EV +NV S+RN+ +++T +N + +L+A+ LV+T +++ ++
Sbjct: 150 DK-KVLLVLPEVEKNVYLSARNLKKAEVMTASQVNSYKVLNADVLVVTENSLKVID 204
>gi|429739978|ref|ZP_19273692.1| 50S ribosomal protein L4 [Prevotella saccharolytica F0055]
gi|429154679|gb|EKX97400.1| 50S ribosomal protein L4 [Prevotella saccharolytica F0055]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GTA + R E+ G RK QK G ARRG +P+ GG VFGPKPRD+ K
Sbjct: 41 LANQRQGTAKSKERSEMSGSTRKLGRQKGGGGARRGDINSPVLVGGARVFGPKPRDYGFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A IVVE+FD PKTK+F+ ++ D K K L+
Sbjct: 101 LNKKVKLLARKSALSYKAQDNAIIVVEDFD--LATPKTKDFVNIVKSLNADNK-KTLLLL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258
V++NV S+RN+ +++T LN + +L+A+ LV+T +++ ++G
Sbjct: 158 PSVNKNVYLSARNLQRSEVMTASALNAYKVLNADVLVITEKSLEAIDG 205
>gi|424779809|ref|ZP_18206701.1| LSU ribosomal protein L4p [Catellicoccus marimammalium M35/04/3]
gi|422843559|gb|EKU27989.1| LSU ribosomal protein L4p [Catellicoccus marimammalium M35/04/3]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + V+ A+I + R+GT + R V GGGRKP+ QK T
Sbjct: 11 GTQNGEVTLNDAIFGIEPNENAVYDAIIMQRASLRQGTHAVRNRSAVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLAI + ++ A ++V+ +
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSEKVAENKMVIVDALN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE PKTKEF + + LD K +V +E S+RN+ + ++ +++ D+
Sbjct: 131 --FETPKTKEFKQVLA--NLDVTTKTLLVVENENETAMLSARNLPNVSVVFADNVSVLDV 186
Query: 241 LDAETLVLTPSTVD 254
+ A+ +++T + ++
Sbjct: 187 VSADKMLMTQAALN 200
>gi|227512865|ref|ZP_03942914.1| 50S ribosomal protein L4 [Lactobacillus buchneri ATCC 11577]
gi|227522993|ref|ZP_03953042.1| 50S ribosomal protein L4 [Lactobacillus hilgardii ATCC 8290]
gi|227083865|gb|EEI19177.1| 50S ribosomal protein L4 [Lactobacillus buchneri ATCC 11577]
gi|227089811|gb|EEI25123.1| 50S ribosomal protein L4 [Lactobacillus hilgardii ATCC 8290]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ ++R+GT S R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ + KK RLA+ + ++ A E +VV+ FE PKTKEF + + +
Sbjct: 92 PTPRSYAYHLPKKVSRLALKSVLSEKVADEKLVVVDSL--VFETPKTKEFAALLEKLNVS 149
Query: 202 PKQKATFLVMEV-SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K T +V+E +E S+ N+ +K+++ +N D+ D + +V+T + +
Sbjct: 150 TK---TLIVLEDGNEKASLSAHNLENVKVVSADGINTLDVADHDKVVITKAAL 199
>gi|384564363|ref|ZP_10011467.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
glauca K62]
gi|384520217|gb|EIE97412.1| 50S ribosomal protein L4, bacterial/organelle [Saccharomonospora
glauca K62]
Length = 227
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 116/216 (53%), Gaps = 16/216 (7%)
Query: 50 LASPLPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTR 104
+ + + + S TGE G L D+++ P ++H+ ++ M R+GT T TR
Sbjct: 1 MTATVELKSPTGEAQGTVELPAEIFDVQANIP-----LMHQVVVAQMAAARQGTHDTKTR 55
Query: 105 GEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAI 164
GEVRGGGRKPY QK TGRAR+GS R P GGG V GP PRD++ + KK K A+ A+
Sbjct: 56 GEVRGGGRKPYRQKGTGRARQGSVRAPQFTGGGTVHGPTPRDYTQRTPKKMKAAALRGAL 115
Query: 165 ASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENV-EKSSRN 223
+ A A V+ E E+P TK A+ + K +V+ + V S+RN
Sbjct: 116 SDRARAGQVHVITELVSG-EKPSTKAAKSALAAV---TQAKRVLVVLHRDDEVGTYSARN 171
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNG 258
+ + ++TP LN +D+L + +V T + D FL G
Sbjct: 172 LPNVHLITPDQLNTYDVLVNDDVVFTKAAFDAFLAG 207
>gi|359403543|ref|ZP_09196447.1| 50S ribosomal protein L4 [Spiroplasma melliferum KC3]
gi|438119455|ref|ZP_20871663.1| 50S ribosomal protein L4 [Spiroplasma melliferum IPMB4A]
gi|358832774|gb|EHK51878.1| 50S ribosomal protein L4 [Spiroplasma melliferum KC3]
gi|434155468|gb|ELL44417.1| 50S ribosomal protein L4 [Spiroplasma melliferum IPMB4A]
Length = 208
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G + E ++ + + + A+I R+GT T TR EV GGGRK
Sbjct: 3 LQVLDAKGTSVKEISVNDAIWGIEPHQQAMFDAVIAQQAAMRQGTHKTKTRTEVSGGGRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGG+VFGP P +++ +NKK ++LAI +A++ +N
Sbjct: 63 PWRQKGTGRARQGSIRAPQWKGGGIVFGPTPEKNYLKHVNKKVRKLAIKSALSLKVQDKN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+++++F ++P TK +E + ++ +K + E E KSSRNI + ++T
Sbjct: 123 IMIIDQFG--IDKPSTKAMVEVLNNLKVNG-EKLLIITTEGDEVNFKSSRNIEKVNIITS 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRY 260
+N++D+L+A L++T + + Y
Sbjct: 180 TGINIYDLLNANKLLVTEQALKAIEEVY 207
>gi|402845993|ref|ZP_10894313.1| 50S ribosomal protein L4 [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402268753|gb|EJU18118.1| 50S ribosomal protein L4 [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK QK G ARRG +P+ GGG VFGP PRD+ K
Sbjct: 41 LANQRQGTHKSKERSEISGSTRKLIRQKGGGGARRGDINSPVLVGGGRVFGPTPRDYGFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A + +VVE F+ PKTK+F+ + + K KA F+V
Sbjct: 101 LNKKVKALARRSALTYKAQKQEIVVVENFE--LAAPKTKDFVALSKALQVADK-KALFVV 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+S+N+ SSRN+ T +++ LN + +LD + L+LT + V +N ++
Sbjct: 158 EALSDNLVLSSRNLRTARVMNAFQLNTYSVLDCKKLILTEAAVAVINEQF 207
>gi|257456893|ref|ZP_05622074.1| ribosomal protein, L4/L1 family [Treponema vincentii ATCC 35580]
gi|257445602|gb|EEV20664.1| ribosomal protein, L4/L1 family [Treponema vincentii ATCC 35580]
Length = 211
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 6/183 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V++ A+ ++ N R GTAST R EV G KPY QK TGRARRG ++PL GGG +FG
Sbjct: 31 VIYYAITNELANMRVGTASTKGRAEVNGSNAKPYKQKGTGRARRGDKKSPLLLGGGTIFG 90
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S I KK KRLA+ + ++ A + +V+E+F E KTK+ + ++ + D
Sbjct: 91 PKPRDYSYAIPKKAKRLAMKSILSLKAQDDRLVVIEDF--TVETGKTKDLAKILQAFVQD 148
Query: 202 PKQKATFLVMEVSEN-VEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
+ T LV++ + ++++ +NI TL LT L D+ +++ S L+ Y
Sbjct: 149 ER---TVLVLKDDDAMLKRAGKNIPTLSFLTYNRLRAHDLFYGRKVLMLESAAKNLSSFY 205
Query: 261 GVE 263
E
Sbjct: 206 AAE 208
>gi|222150446|ref|YP_002559599.1| 50S ribosomal protein L4 [Macrococcus caseolyticus JCSC5402]
gi|254803742|sp|B9E9J2.1|RL4_MACCJ RecName: Full=50S ribosomal protein L4
gi|222119568|dbj|BAH16903.1| 50S ribosomal protein L4 [Macrococcus caseolyticus JCSC5402]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ + + V+ A+ + R+GT + R V GGGRKP+
Sbjct: 6 VLKVDGTKAGSIELNDNVFGIEPNQHVLFEAINLQRASMRQGTHAVKNRSAVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR +S K+ KK +RLA+ +A+ SA EN
Sbjct: 66 KQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSAL-SAKVQENAFT 124
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V E F+ PKTKEF L+ +K F+V NV S+RNI + ++T L
Sbjct: 125 VLE-SLTFDAPKTKEFKNMTTT--LELPKKVLFVVEAEDVNVALSARNIPGVTVITTTGL 181
Query: 236 NLFDILDAETLVLTPSTVD 254
N+ DI+ A +V+T V+
Sbjct: 182 NVLDIVHANQVVMTKGAVE 200
>gi|184155990|ref|YP_001844330.1| 50S ribosomal protein L4 [Lactobacillus fermentum IFO 3956]
gi|227515488|ref|ZP_03945537.1| ribosomal protein L4 [Lactobacillus fermentum ATCC 14931]
gi|260662753|ref|ZP_05863647.1| 50S ribosomal protein L4/L1 [Lactobacillus fermentum 28-3-CHN]
gi|226730678|sp|B2GDW8.1|RL4_LACF3 RecName: Full=50S ribosomal protein L4
gi|183227334|dbj|BAG27850.1| 50S ribosomal protein L4 [Lactobacillus fermentum IFO 3956]
gi|227086101|gb|EEI21413.1| ribosomal protein L4 [Lactobacillus fermentum ATCC 14931]
gi|260552834|gb|EEX25833.1| 50S ribosomal protein L4/L1 [Lactobacillus fermentum 28-3-CHN]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 86 ALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPR 145
A++ + R+GT + R VRGGG+KP+ QK TGRAR+GS R P GGG+VFGP PR
Sbjct: 36 AILRQRASLRQGTHAVKNRSAVRGGGKKPWRQKGTGRARQGSIRAPQFRGGGIVFGPTPR 95
Query: 146 DWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQK 205
++ + +K ++LAI +A++ A + +VV+ + F+ PKTKEF M L ++
Sbjct: 96 SYNYALPRKVRQLAIKSALSQKVANDKFVVVDGLN--FDAPKTKEFAGVMN--NLKVSER 151
Query: 206 ATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+V + +N + S+RN+ ++TP +N+ +++DA+ +++T S +
Sbjct: 152 VLVVVTDEDKNAQLSARNLPKTTVVTPAGVNILNVVDAQKIIITQSAL 199
>gi|110004230|emb|CAK98568.1| 50s ribosomal protein l4 [Spiroplasma citri]
Length = 208
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L +L G + E ++ + + + A+I R+GT T TR EV GGG+K
Sbjct: 3 LQVLDAKGTSVKEISVNDAIWGIEPHQQAMFDAVIAQQAAMRQGTHKTKTRTEVSGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR+GS R P GGG+VFGP P +++ +NKK ++LAI +A++ +N
Sbjct: 63 PWRQKGTGRARQGSIRAPQWKGGGIVFGPTPEKNYLKHVNKKVRKLAIKSALSLKVQDKN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+++++F ++P TK +E + ++ +K + E E KSSRNI + ++T
Sbjct: 123 IMIIDQFG--IDKPSTKAMVEVLNNLKVNG-EKLLIITTEGDEVNFKSSRNIEKVNIITS 179
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRY 260
+N++D+L+A L++T V + Y
Sbjct: 180 TGINIYDLLNANKLLVTEQAVKAIEEVY 207
>gi|1033073|gb|AAA97862.1| ribosomal protein L4 [Thermus thermophilus HB8]
gi|1586538|prf||2204237A ribosomal protein L4
Length = 210
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ +RRGTAST TRGEV GRK + QK TGRAR G P+ GGGVVFGPKPRD+S
Sbjct: 41 LAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYT 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+ KK ++ ++ A+A A ++VE F G KTKEF+ + GLD + + L+
Sbjct: 101 LPKKVRKKGLAMAVADRAREGKLLLVEAFAGV--NGKTKEFLAWAKEAGLDGSE--SVLL 156
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
+ +E V +++RN+ + L P LN++DI+ E LV+ + R G E
Sbjct: 157 VTGNELVRRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAWEVFQNRIGGE 209
>gi|410696286|gb|AFV75354.1| 50S ribosomal protein L4, bacterial/organelle [Thermus oshimai
JL-2]
Length = 206
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
Query: 90 DMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSI 149
+ ++RRGTAST TRGEV RK Y QK TGRAR G P+ GGG VFGPKPRD+S
Sbjct: 36 QLASRRRGTASTKTRGEVAYSSRKIYPQKHTGRARHGDIGAPIFVGGGTVFGPKPRDYSY 95
Query: 150 KINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFL 209
+ KK ++ ++ A+A A ++VE+F G R TKEF+ + GL+ ++ T L
Sbjct: 96 TLPKKVRKAGLAMAVADRAREGKLLLVEDFAGVNGR--TKEFLAWAKGAGLNGEE--TVL 151
Query: 210 VMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVE 263
++ E V +++RN+ + L P LN++DIL E LV+ + R G E
Sbjct: 152 LVAQDERVRRAARNLPWVVTLAPEGLNVYDILRTERLVMDLAAWQAFQARLGGE 205
>gi|366087937|ref|ZP_09454422.1| 50S ribosomal protein L4 [Lactobacillus zeae KCTC 3804]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R V GGGRKP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ K+ KK +RLAI + ++ + +VV+ + F+ PKTK F + GL
Sbjct: 92 PTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLN--FDTPKTKAFQNVLD--GLK 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+KA ++ + +E K++RN+ +K++ +N+ D +D + L+LT S +
Sbjct: 148 VNEKALVVLEDGNEVAAKAARNLPNVKVVPAEGINVLDAVDYKKLILTQSAL 199
>gi|227509932|ref|ZP_03939981.1| 50S ribosomal protein L4 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190538|gb|EEI70605.1| 50S ribosomal protein L4 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ ++R+GT S R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAVVMQRASRRQGTHSVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ + KK RLA+ + ++ A E +VV+ FE PKTKEF + + +
Sbjct: 92 PTPRSYAYHLPKKVSRLALKSVLSEKVADEKLVVVDSL--VFETPKTKEFAALLEKLNVS 149
Query: 202 PKQKATFLVMEV-SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K T +V+E +E S+ N+ +K+++ +N D+ D + +V+T + +
Sbjct: 150 TK---TLIVLEDGNEKASLSAHNLENVKVVSADGINTLDVADHDKVVITKAAL 199
>gi|216263708|ref|ZP_03435703.1| ribosomal protein L4/L1 family protein [Borrelia afzelii ACA-1]
gi|410679254|ref|YP_006931656.1| 50S ribosomal protein L4 [Borrelia afzelii HLJ01]
gi|215980552|gb|EEC21373.1| ribosomal protein L4/L1 family protein [Borrelia afzelii ACA-1]
gi|408536642|gb|AFU74773.1| 50S ribosomal protein L4 [Borrelia afzelii HLJ01]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++I LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIRTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ A+ EN
Sbjct: 65 KQKGTGRARVGTKRNPVWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRASDENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFN--IESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|437924|emb|CAA79778.1| ribosomal protein L4 [Thermotoga maritima]
Length = 235
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 118/217 (54%), Gaps = 23/217 (10%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L+ GEK+G + D V+ R + + N+R GTAST TRGEV GGGRKP+
Sbjct: 6 LLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRA GS R+P+ GGVV GPKPRDWS K+NKK K+LA+ +A++ +V
Sbjct: 66 PQKHTGRASHGSIRSPIWRHGGVVHGPKPRDWSKKLNKKMKKLALRSALSVKYRENKLLV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE----NVEKSSRNIGTLKMLT 231
++ K ERPKTK E ++ L K T +V+ E NV+ S RN+ +K++
Sbjct: 126 LDHL--KLERPKTKSLKEILQ--NLQLSDKKTLMVLPWKEEGYMNVKLSGRNLPDVKVII 181
Query: 232 PRT---------------LNLFDILDAETLVLTPSTV 253
LN+FD+L + LVLT V
Sbjct: 182 ADNPNNSKNGEKAVRIDGLNVFDMLKYDYLVLTRDMV 218
>gi|373458302|ref|ZP_09550069.1| ribosomal protein L4/L1e [Caldithrix abyssi DSM 13497]
gi|371719966|gb|EHO41737.1| ribosomal protein L4/L1e [Caldithrix abyssi DSM 13497]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT +T R V GGG+KP+ QK TGRAR+G+ R P GGG VFGP PRD+S K
Sbjct: 41 LANRRQGTHATKNRSAVAGGGKKPFRQKGTGRARQGTIRAPHMVGGGRVFGPHPRDYSQK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K+LA +A++ A +VV++F+ +E+P TK + + L+ K K
Sbjct: 101 VNKKVKQLARRSALSYKAKENKILVVQDFN--YEKPSTKNMVNLLSNLNLEGK-KVLICT 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
E + + KS+ N+ +++ T + +D+L A+T++ V +N
Sbjct: 158 SEYAPTLVKSAANLYQVEVRESVTFSTYDVLKADTVIFQEGAVKKVN 204
>gi|363896475|ref|ZP_09323026.1| 50S ribosomal protein L4/L1 [Oribacterium sp. ACB7]
gi|361960761|gb|EHL13994.1| 50S ribosomal protein L4/L1 [Oribacterium sp. ACB7]
Length = 187
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 23/200 (11%)
Query: 56 ILSFTGEKIGETY--LDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
++ F+ + TY L L P A+A HR LTR EV GGGRK
Sbjct: 1 MMRFSQHRFMSTYYTLQLWHNLPINAKA--HR--------------KALTRSEVSGGGRK 44
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TG AR+GS R P GGGVVF P PRD++ +NKKEKR A+ A+++A A
Sbjct: 45 PWRQKGTGHARQGSIRAPQWKGGGVVFAPTPRDYTTTMNKKEKRAALKAALSNAVAENKL 104
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IVV+E +F+ KTK F + + QKA L+ E +N S+RNI +K
Sbjct: 105 IVVDEI--RFDEIKTKNFQNMLNALHV---QKAFVLLDENDKNTVLSARNIQDVKTAQVN 159
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN++D+L T++ T + +
Sbjct: 160 ELNVYDVLRYGTVLATKAAL 179
>gi|380764215|pdb|3TVE|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
Length = 202
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 4 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 57
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 58 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 117
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 118 LLLVEAFAG--VNGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 173
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DI+ E LV+ + R G
Sbjct: 174 EGLNVYDIVRTERLVMDLDAWEVFQNRIG 202
>gi|322374046|ref|ZP_08048580.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C150]
gi|419706374|ref|ZP_14233898.1| 50S ribosomal protein L4 [Streptococcus salivarius PS4]
gi|321277012|gb|EFX54083.1| ribosomal protein L4/L1 family protein [Streptococcus sp. C150]
gi|383283886|gb|EIC81826.1| 50S ribosomal protein L4 [Streptococcus salivarius PS4]
Length = 207
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG+++ L+ + +VV +I+ + R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEVSSVELNDAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+ +K +RLA+ + ++ A + + VE
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
F PKT EF + + +D K +V E ++ E S+RN+ + + TP T ++ D
Sbjct: 130 S--FAAPKTAEFAKVLSALSID--SKVLVIVEEGNKFAELSARNLANVTVATPATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++A+ L++T +
Sbjct: 186 IVNADKLLVTKEAI 199
>gi|224510784|pdb|3FIN|F Chain F, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 50s Subunit.
gi|380764296|pdb|3TVH|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
Length = 208
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 9 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 63 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 123 LLLVEAFAG--VNGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 178
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DI+ E LV+ + R G
Sbjct: 179 EGLNVYDIVRTERLVMDLDAWEVFQNRIG 207
>gi|357411732|ref|YP_004923468.1| 50S ribosomal protein L4 [Streptomyces flavogriseus ATCC 33331]
gi|320009101|gb|ADW03951.1| ribosomal protein L4/L1e [Streptomyces flavogriseus ATCC 33331]
Length = 216
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 116/218 (53%), Gaps = 9/218 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + ILS G+K G L + T+ ++H+ ++ + R+GT T TRGEVRGGG
Sbjct: 2 STIDILSPAGDKAGTVELPAEIFDAKTSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
RKPY QK TGRAR+GS R P GGGVV GP+PRD+S + KK K A+ A++ A
Sbjct: 62 RKPYRQKGTGRARQGSTRAPQFAGGGVVHGPQPRDYSQRTPKKMKAAALRGALSDRARHS 121
Query: 172 NTIVVEE-FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME-VSENVEKSSRNIGTLKM 229
VV +G K +G ++ LV+E E S+RN+ + +
Sbjct: 122 RIHVVTGVVEGGISTKAAKTL------FGKISERSNLLLVVERADEAAWLSARNLPQVHI 175
Query: 230 LTPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEG 266
L P LN +D++ ++ +V T + + F++G E EG
Sbjct: 176 LEPGQLNTYDVIVSDDVVFTQAAFESFVSGPQTAETEG 213
>gi|269122580|ref|YP_003310757.1| 50S ribosomal protein L4 [Sebaldella termitidis ATCC 33386]
gi|268616458|gb|ACZ10826.1| ribosomal protein L4/L1e [Sebaldella termitidis ATCC 33386]
Length = 212
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 5/199 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L I + G K G + + +AV+H L ++ R+G+AST TR EVRGGGRK
Sbjct: 4 LDIYTIDGTKAGTVDVKEEIFGIKPNKAVMHEVLTAELAEVRQGSASTKTRAEVRGGGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGGV GPKPRD+ K+NKK ++LAI +A+++
Sbjct: 64 PFRQKGTGRARQGSTRAPHMVGGGVSHGPKPRDYVKKVNKKVRKLAIRSALSAKVNKGEI 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATF---LVMEVSENVEKSSRNIGTLKML 230
I+++ F+ E+PKTK I+ ++ + ++ L +E N S RNI +L
Sbjct: 124 IIIDAFE--LEKPKTKTIIDFSKKLDMAGAKQLYILNDLYIENEYNAYLSIRNIEKSYVL 181
Query: 231 TPRTLNLFDILDAETLVLT 249
P L+++ +L + +++T
Sbjct: 182 MPNELSVYWLLKQDKIIMT 200
>gi|227550721|ref|ZP_03980770.1| 50S ribosomal protein L4 [Enterococcus faecium TX1330]
gi|257878726|ref|ZP_05658379.1| ribosomal protein L4 [Enterococcus faecium 1,230,933]
gi|257881367|ref|ZP_05661020.1| ribosomal protein L4 [Enterococcus faecium 1,231,502]
gi|257885635|ref|ZP_05665288.1| ribosomal protein L4 [Enterococcus faecium 1,231,501]
gi|257888020|ref|ZP_05667673.1| ribosomal protein L4 [Enterococcus faecium 1,141,733]
gi|257890585|ref|ZP_05670238.1| ribosomal protein L4 [Enterococcus faecium 1,231,410]
gi|257893175|ref|ZP_05672828.1| ribosomal protein L4 [Enterococcus faecium 1,231,408]
gi|257896361|ref|ZP_05676014.1| ribosomal protein L4 [Enterococcus faecium Com12]
gi|257899335|ref|ZP_05678988.1| ribosomal protein L4 [Enterococcus faecium Com15]
gi|261206994|ref|ZP_05921683.1| ribosomal protein L4 [Enterococcus faecium TC 6]
gi|289565371|ref|ZP_06445821.1| 50S ribosomal protein L4/L1 [Enterococcus faecium D344SRF]
gi|293379447|ref|ZP_06625591.1| ribosomal protein L4/L1 family protein [Enterococcus faecium PC4.1]
gi|293553880|ref|ZP_06674486.1| ribosomal protein L4/L1 family [Enterococcus faecium E1039]
gi|293562947|ref|ZP_06677414.1| ribosomal protein L4/L1 family [Enterococcus faecium E1162]
gi|293567930|ref|ZP_06679271.1| ribosomal protein L4/L1 family [Enterococcus faecium E1071]
gi|293570685|ref|ZP_06681735.1| ribosomal protein L4/L1 family [Enterococcus faecium E980]
gi|294615392|ref|ZP_06695265.1| ribosomal protein L4/L1 family [Enterococcus faecium E1636]
gi|294618319|ref|ZP_06697900.1| ribosomal protein L4/L1 family [Enterococcus faecium E1679]
gi|294621079|ref|ZP_06700270.1| ribosomal protein L4/L1 [Enterococcus faecium U0317]
gi|314937609|ref|ZP_07844935.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a04]
gi|314942892|ref|ZP_07849705.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133C]
gi|314947972|ref|ZP_07851376.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0082]
gi|314950889|ref|ZP_07853958.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133A]
gi|314991463|ref|ZP_07856940.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133B]
gi|314995016|ref|ZP_07860136.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a01]
gi|383327416|ref|YP_005353300.1| 50S ribosomal protein L4 [Enterococcus faecium Aus0004]
gi|389867241|ref|YP_006374664.1| 50S ribosomal protein L4 [Enterococcus faecium DO]
gi|406580823|ref|ZP_11056011.1| 50S ribosomal protein L4 [Enterococcus sp. GMD4E]
gi|406582819|ref|ZP_11057916.1| 50S ribosomal protein L4 [Enterococcus sp. GMD3E]
gi|406585073|ref|ZP_11060068.1| 50S ribosomal protein L4 [Enterococcus sp. GMD2E]
gi|406590652|ref|ZP_11065011.1| 50S ribosomal protein L4 [Enterococcus sp. GMD1E]
gi|410936018|ref|ZP_11367890.1| 50S ribosomal protein L4 [Enterococcus sp. GMD5E]
gi|415896774|ref|ZP_11550879.1| ribosomal protein L4/L1 family [Enterococcus faecium E4453]
gi|416132153|ref|ZP_11597843.1| ribosomal protein L4/L1 family [Enterococcus faecium E4452]
gi|424763838|ref|ZP_18191303.1| 50S ribosomal protein L4 [Enterococcus faecium TX1337RF]
gi|424791154|ref|ZP_18217635.1| 50S ribosomal protein L4 [Enterococcus faecium V689]
gi|424797492|ref|ZP_18223076.1| 50S ribosomal protein L4 [Enterococcus faecium S447]
gi|424828282|ref|ZP_18253018.1| 50S ribosomal protein L4 [Enterococcus faecium R501]
gi|424854885|ref|ZP_18279228.1| 50S ribosomal protein L4 [Enterococcus faecium R499]
gi|424869461|ref|ZP_18293165.1| 50S ribosomal protein L4 [Enterococcus faecium R497]
gi|424950249|ref|ZP_18365420.1| 50S ribosomal protein L4 [Enterococcus faecium R496]
gi|424954387|ref|ZP_18369289.1| 50S ribosomal protein L4 [Enterococcus faecium R494]
gi|424958476|ref|ZP_18373122.1| 50S ribosomal protein L4 [Enterococcus faecium R446]
gi|424959909|ref|ZP_18374466.1| 50S ribosomal protein L4 [Enterococcus faecium P1986]
gi|424965738|ref|ZP_18379655.1| 50S ribosomal protein L4 [Enterococcus faecium P1190]
gi|424969470|ref|ZP_18383040.1| 50S ribosomal protein L4 [Enterococcus faecium P1140]
gi|424970187|ref|ZP_18383716.1| 50S ribosomal protein L4 [Enterococcus faecium P1139]
gi|424974064|ref|ZP_18387316.1| 50S ribosomal protein L4 [Enterococcus faecium P1137]
gi|424976187|ref|ZP_18389293.1| 50S ribosomal protein L4 [Enterococcus faecium P1123]
gi|424981036|ref|ZP_18393789.1| 50S ribosomal protein L4 [Enterococcus faecium ERV99]
gi|424984549|ref|ZP_18397077.1| 50S ribosomal protein L4 [Enterococcus faecium ERV69]
gi|424987409|ref|ZP_18399784.1| 50S ribosomal protein L4 [Enterococcus faecium ERV38]
gi|424990860|ref|ZP_18403050.1| 50S ribosomal protein L4 [Enterococcus faecium ERV26]
gi|424994518|ref|ZP_18406453.1| 50S ribosomal protein L4 [Enterococcus faecium ERV168]
gi|424997347|ref|ZP_18409110.1| 50S ribosomal protein L4 [Enterococcus faecium ERV165]
gi|425001367|ref|ZP_18412886.1| 50S ribosomal protein L4 [Enterococcus faecium ERV161]
gi|425004033|ref|ZP_18415363.1| 50S ribosomal protein L4 [Enterococcus faecium ERV102]
gi|425006864|ref|ZP_18418019.1| 50S ribosomal protein L4 [Enterococcus faecium ERV1]
gi|425011010|ref|ZP_18421934.1| 50S ribosomal protein L4 [Enterococcus faecium E422]
gi|425014113|ref|ZP_18424808.1| 50S ribosomal protein L4 [Enterococcus faecium E417]
gi|425017911|ref|ZP_18428392.1| 50S ribosomal protein L4 [Enterococcus faecium C621]
gi|425020920|ref|ZP_18431207.1| 50S ribosomal protein L4 [Enterococcus faecium C497]
gi|425030537|ref|ZP_18435710.1| 50S ribosomal protein L4 [Enterococcus faecium C1904]
gi|425032675|ref|ZP_18437701.1| 50S ribosomal protein L4 [Enterococcus faecium 515]
gi|425035538|ref|ZP_18440373.1| 50S ribosomal protein L4 [Enterococcus faecium 514]
gi|425038344|ref|ZP_18442963.1| 50S ribosomal protein L4 [Enterococcus faecium 513]
gi|425041714|ref|ZP_18446097.1| 50S ribosomal protein L4 [Enterococcus faecium 511]
gi|425045422|ref|ZP_18449528.1| 50S ribosomal protein L4 [Enterococcus faecium 510]
gi|425048507|ref|ZP_18452407.1| 50S ribosomal protein L4 [Enterococcus faecium 509]
gi|425051599|ref|ZP_18455256.1| 50S ribosomal protein L4 [Enterococcus faecium 506]
gi|425054907|ref|ZP_18458408.1| 50S ribosomal protein L4 [Enterococcus faecium 505]
gi|425058266|ref|ZP_18461652.1| 50S ribosomal protein L4 [Enterococcus faecium 504]
gi|425060498|ref|ZP_18463792.1| 50S ribosomal protein L4 [Enterococcus faecium 503]
gi|427396938|ref|ZP_18889564.1| 50S ribosomal protein L4 [Enterococcus durans FB129-CNAB-4]
gi|430823272|ref|ZP_19441844.1| 50S ribosomal protein L4 [Enterococcus faecium E0120]
gi|430828772|ref|ZP_19446887.1| 50S ribosomal protein L4 [Enterococcus faecium E0269]
gi|430831821|ref|ZP_19449869.1| 50S ribosomal protein L4 [Enterococcus faecium E0333]
gi|430834875|ref|ZP_19452877.1| 50S ribosomal protein L4 [Enterococcus faecium E0679]
gi|430836367|ref|ZP_19454348.1| 50S ribosomal protein L4 [Enterococcus faecium E0680]
gi|430839295|ref|ZP_19457236.1| 50S ribosomal protein L4 [Enterococcus faecium E0688]
gi|430842491|ref|ZP_19460406.1| 50S ribosomal protein L4 [Enterococcus faecium E1007]
gi|430843054|ref|ZP_19460956.1| 50S ribosomal protein L4 [Enterococcus faecium E1050]
gi|430848220|ref|ZP_19466046.1| 50S ribosomal protein L4 [Enterococcus faecium E1133]
gi|430850698|ref|ZP_19468455.1| 50S ribosomal protein L4 [Enterococcus faecium E1185]
gi|430853289|ref|ZP_19471019.1| 50S ribosomal protein L4 [Enterococcus faecium E1258]
gi|430855749|ref|ZP_19473455.1| 50S ribosomal protein L4 [Enterococcus faecium E1392]
gi|430859010|ref|ZP_19476628.1| 50S ribosomal protein L4 [Enterococcus faecium E1552]
gi|430861232|ref|ZP_19478821.1| 50S ribosomal protein L4 [Enterococcus faecium E1573]
gi|430866305|ref|ZP_19481582.1| 50S ribosomal protein L4 [Enterococcus faecium E1574]
gi|430952275|ref|ZP_19486318.1| 50S ribosomal protein L4 [Enterococcus faecium E1576]
gi|430999158|ref|ZP_19488126.1| 50S ribosomal protein L4 [Enterococcus faecium E1578]
gi|431036415|ref|ZP_19492185.1| 50S ribosomal protein L4 [Enterococcus faecium E1590]
gi|431081707|ref|ZP_19495797.1| 50S ribosomal protein L4 [Enterococcus faecium E1604]
gi|431118100|ref|ZP_19498054.1| 50S ribosomal protein L4 [Enterococcus faecium E1613]
gi|431210723|ref|ZP_19501009.1| 50S ribosomal protein L4 [Enterococcus faecium E1620]
gi|431235004|ref|ZP_19503027.1| 50S ribosomal protein L4 [Enterococcus faecium E1622]
gi|431255612|ref|ZP_19504735.1| 50S ribosomal protein L4 [Enterococcus faecium E1623]
gi|431303542|ref|ZP_19508389.1| 50S ribosomal protein L4 [Enterococcus faecium E1626]
gi|431380514|ref|ZP_19510895.1| 50S ribosomal protein L4 [Enterococcus faecium E1627]
gi|431438045|ref|ZP_19513208.1| 50S ribosomal protein L4 [Enterococcus faecium E1630]
gi|431506897|ref|ZP_19515723.1| 50S ribosomal protein L4 [Enterococcus faecium E1634]
gi|431545075|ref|ZP_19518716.1| 50S ribosomal protein L4 [Enterococcus faecium E1731]
gi|431592335|ref|ZP_19521571.1| 50S ribosomal protein L4 [Enterococcus faecium E1861]
gi|431695862|ref|ZP_19524756.1| 50S ribosomal protein L4 [Enterococcus faecium E1904]
gi|431739069|ref|ZP_19528009.1| 50S ribosomal protein L4 [Enterococcus faecium E1972]
gi|431740650|ref|ZP_19529561.1| 50S ribosomal protein L4 [Enterococcus faecium E2039]
gi|431743966|ref|ZP_19532839.1| 50S ribosomal protein L4 [Enterococcus faecium E2071]
gi|431747237|ref|ZP_19536036.1| 50S ribosomal protein L4 [Enterococcus faecium E2134]
gi|431749425|ref|ZP_19538166.1| 50S ribosomal protein L4 [Enterococcus faecium E2297]
gi|431753116|ref|ZP_19541793.1| 50S ribosomal protein L4 [Enterococcus faecium E2620]
gi|431755938|ref|ZP_19544580.1| 50S ribosomal protein L4 [Enterococcus faecium E2883]
gi|431757942|ref|ZP_19546571.1| 50S ribosomal protein L4 [Enterococcus faecium E3083]
gi|431760074|ref|ZP_19548678.1| 50S ribosomal protein L4 [Enterococcus faecium E3346]
gi|431763208|ref|ZP_19551761.1| 50S ribosomal protein L4 [Enterococcus faecium E3548]
gi|431764905|ref|ZP_19553431.1| 50S ribosomal protein L4 [Enterococcus faecium E4215]
gi|431768073|ref|ZP_19556514.1| 50S ribosomal protein L4 [Enterococcus faecium E1321]
gi|431769422|ref|ZP_19557832.1| 50S ribosomal protein L4 [Enterococcus faecium E1644]
gi|431774573|ref|ZP_19562880.1| 50S ribosomal protein L4 [Enterococcus faecium E2369]
gi|431776377|ref|ZP_19564639.1| 50S ribosomal protein L4 [Enterococcus faecium E2560]
gi|431779701|ref|ZP_19567893.1| 50S ribosomal protein L4 [Enterococcus faecium E4389]
gi|431782496|ref|ZP_19570629.1| 50S ribosomal protein L4 [Enterococcus faecium E6012]
gi|431784317|ref|ZP_19572359.1| 50S ribosomal protein L4 [Enterococcus faecium E6045]
gi|447911578|ref|YP_007392990.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecium NRRL B-2354]
gi|227180182|gb|EEI61154.1| 50S ribosomal protein L4 [Enterococcus faecium TX1330]
gi|257812954|gb|EEV41712.1| ribosomal protein L4 [Enterococcus faecium 1,230,933]
gi|257817025|gb|EEV44353.1| ribosomal protein L4 [Enterococcus faecium 1,231,502]
gi|257821491|gb|EEV48621.1| ribosomal protein L4 [Enterococcus faecium 1,231,501]
gi|257824074|gb|EEV51006.1| ribosomal protein L4 [Enterococcus faecium 1,141,733]
gi|257826945|gb|EEV53571.1| ribosomal protein L4 [Enterococcus faecium 1,231,410]
gi|257829554|gb|EEV56161.1| ribosomal protein L4 [Enterococcus faecium 1,231,408]
gi|257832926|gb|EEV59347.1| ribosomal protein L4 [Enterococcus faecium Com12]
gi|257837247|gb|EEV62321.1| ribosomal protein L4 [Enterococcus faecium Com15]
gi|260078622|gb|EEW66324.1| ribosomal protein L4 [Enterococcus faecium TC 6]
gi|289162861|gb|EFD10711.1| 50S ribosomal protein L4/L1 [Enterococcus faecium D344SRF]
gi|291291686|gb|ADD91677.1| 50S ribosomal protein L4 [Enterococcus faecium]
gi|291589515|gb|EFF21322.1| ribosomal protein L4/L1 family [Enterococcus faecium E1071]
gi|291591766|gb|EFF23402.1| ribosomal protein L4/L1 family [Enterococcus faecium E1636]
gi|291595413|gb|EFF26725.1| ribosomal protein L4/L1 family [Enterococcus faecium E1679]
gi|291599315|gb|EFF30341.1| ribosomal protein L4/L1 [Enterococcus faecium U0317]
gi|291601932|gb|EFF32178.1| ribosomal protein L4/L1 family [Enterococcus faecium E1039]
gi|291605073|gb|EFF34540.1| ribosomal protein L4/L1 family [Enterococcus faecium E1162]
gi|291609157|gb|EFF38429.1| ribosomal protein L4/L1 family [Enterococcus faecium E980]
gi|292641970|gb|EFF60136.1| ribosomal protein L4/L1 family protein [Enterococcus faecium PC4.1]
gi|313590742|gb|EFR69587.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a01]
gi|313593943|gb|EFR72788.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133B]
gi|313596898|gb|EFR75743.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133A]
gi|313598364|gb|EFR77209.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133C]
gi|313642986|gb|EFS07566.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0133a04]
gi|313645570|gb|EFS10150.1| ribosomal protein L4/L1 family protein [Enterococcus faecium
TX0082]
gi|364090882|gb|EHM33410.1| ribosomal protein L4/L1 family [Enterococcus faecium E4453]
gi|364093419|gb|EHM35693.1| ribosomal protein L4/L1 family [Enterococcus faecium E4452]
gi|378937110|gb|AFC62182.1| 50S ribosomal protein L4 [Enterococcus faecium Aus0004]
gi|388532490|gb|AFK57682.1| ribosomal protein L4 [Enterococcus faecium DO]
gi|402422014|gb|EJV54257.1| 50S ribosomal protein L4 [Enterococcus faecium TX1337RF]
gi|402919912|gb|EJX40471.1| 50S ribosomal protein L4 [Enterococcus faecium V689]
gi|402921048|gb|EJX41518.1| 50S ribosomal protein L4 [Enterococcus faecium S447]
gi|402922816|gb|EJX43163.1| 50S ribosomal protein L4 [Enterococcus faecium R501]
gi|402932214|gb|EJX51746.1| 50S ribosomal protein L4 [Enterococcus faecium R499]
gi|402933538|gb|EJX52964.1| 50S ribosomal protein L4 [Enterococcus faecium R496]
gi|402935564|gb|EJX54807.1| 50S ribosomal protein L4 [Enterococcus faecium R497]
gi|402937021|gb|EJX56165.1| 50S ribosomal protein L4 [Enterococcus faecium R494]
gi|402940102|gb|EJX58959.1| 50S ribosomal protein L4 [Enterococcus faecium R446]
gi|402942959|gb|EJX61500.1| 50S ribosomal protein L4 [Enterococcus faecium P1190]
gi|402948440|gb|EJX66577.1| 50S ribosomal protein L4 [Enterococcus faecium P1140]
gi|402949393|gb|EJX67459.1| 50S ribosomal protein L4 [Enterococcus faecium P1986]
gi|402957411|gb|EJX74802.1| 50S ribosomal protein L4 [Enterococcus faecium P1137]
gi|402962390|gb|EJX79332.1| 50S ribosomal protein L4 [Enterococcus faecium P1139]
gi|402964650|gb|EJX81418.1| 50S ribosomal protein L4 [Enterococcus faecium ERV99]
gi|402968496|gb|EJX84975.1| 50S ribosomal protein L4 [Enterococcus faecium ERV69]
gi|402970313|gb|EJX86668.1| 50S ribosomal protein L4 [Enterococcus faecium P1123]
gi|402974401|gb|EJX90453.1| 50S ribosomal protein L4 [Enterococcus faecium ERV38]
gi|402978442|gb|EJX94181.1| 50S ribosomal protein L4 [Enterococcus faecium ERV26]
gi|402979945|gb|EJX95584.1| 50S ribosomal protein L4 [Enterococcus faecium ERV168]
gi|402986461|gb|EJY01584.1| 50S ribosomal protein L4 [Enterococcus faecium ERV165]
gi|402986924|gb|EJY02023.1| 50S ribosomal protein L4 [Enterococcus faecium ERV161]
gi|402990686|gb|EJY05551.1| 50S ribosomal protein L4 [Enterococcus faecium ERV102]
gi|402996196|gb|EJY10596.1| 50S ribosomal protein L4 [Enterococcus faecium ERV1]
gi|402998217|gb|EJY12482.1| 50S ribosomal protein L4 [Enterococcus faecium E422]
gi|402999463|gb|EJY13650.1| 50S ribosomal protein L4 [Enterococcus faecium E417]
gi|403002770|gb|EJY16716.1| 50S ribosomal protein L4 [Enterococcus faecium C1904]
gi|403003429|gb|EJY17329.1| 50S ribosomal protein L4 [Enterococcus faecium C621]
gi|403008098|gb|EJY21627.1| 50S ribosomal protein L4 [Enterococcus faecium C497]
gi|403012432|gb|EJY25659.1| 50S ribosomal protein L4 [Enterococcus faecium 515]
gi|403017792|gb|EJY30516.1| 50S ribosomal protein L4 [Enterococcus faecium 514]
gi|403019710|gb|EJY32293.1| 50S ribosomal protein L4 [Enterococcus faecium 513]
gi|403025495|gb|EJY37573.1| 50S ribosomal protein L4 [Enterococcus faecium 511]
gi|403027115|gb|EJY39027.1| 50S ribosomal protein L4 [Enterococcus faecium 510]
gi|403030438|gb|EJY42121.1| 50S ribosomal protein L4 [Enterococcus faecium 509]
gi|403035041|gb|EJY46449.1| 50S ribosomal protein L4 [Enterococcus faecium 505]
gi|403037219|gb|EJY48519.1| 50S ribosomal protein L4 [Enterococcus faecium 506]
gi|403038796|gb|EJY49993.1| 50S ribosomal protein L4 [Enterococcus faecium 504]
gi|403042542|gb|EJY53489.1| 50S ribosomal protein L4 [Enterococcus faecium 503]
gi|404453454|gb|EKA00510.1| 50S ribosomal protein L4 [Enterococcus sp. GMD4E]
gi|404457556|gb|EKA04093.1| 50S ribosomal protein L4 [Enterococcus sp. GMD3E]
gi|404463055|gb|EKA08753.1| 50S ribosomal protein L4 [Enterococcus sp. GMD2E]
gi|404469026|gb|EKA13865.1| 50S ribosomal protein L4 [Enterococcus sp. GMD1E]
gi|410735609|gb|EKQ77518.1| 50S ribosomal protein L4 [Enterococcus sp. GMD5E]
gi|425722685|gb|EKU85579.1| 50S ribosomal protein L4 [Enterococcus durans FB129-CNAB-4]
gi|430442370|gb|ELA52415.1| 50S ribosomal protein L4 [Enterococcus faecium E0120]
gi|430480462|gb|ELA57636.1| 50S ribosomal protein L4 [Enterococcus faecium E0333]
gi|430482756|gb|ELA59857.1| 50S ribosomal protein L4 [Enterococcus faecium E0269]
gi|430484944|gb|ELA61891.1| 50S ribosomal protein L4 [Enterococcus faecium E0679]
gi|430488494|gb|ELA65165.1| 50S ribosomal protein L4 [Enterococcus faecium E0680]
gi|430490753|gb|ELA67249.1| 50S ribosomal protein L4 [Enterococcus faecium E0688]
gi|430493572|gb|ELA69875.1| 50S ribosomal protein L4 [Enterococcus faecium E1007]
gi|430498108|gb|ELA74116.1| 50S ribosomal protein L4 [Enterococcus faecium E1050]
gi|430535057|gb|ELA75480.1| 50S ribosomal protein L4 [Enterococcus faecium E1185]
gi|430535563|gb|ELA75963.1| 50S ribosomal protein L4 [Enterococcus faecium E1133]
gi|430541111|gb|ELA81288.1| 50S ribosomal protein L4 [Enterococcus faecium E1258]
gi|430544529|gb|ELA84558.1| 50S ribosomal protein L4 [Enterococcus faecium E1552]
gi|430546291|gb|ELA86253.1| 50S ribosomal protein L4 [Enterococcus faecium E1392]
gi|430550265|gb|ELA90062.1| 50S ribosomal protein L4 [Enterococcus faecium E1573]
gi|430551533|gb|ELA91284.1| 50S ribosomal protein L4 [Enterococcus faecium E1574]
gi|430557410|gb|ELA96869.1| 50S ribosomal protein L4 [Enterococcus faecium E1576]
gi|430562955|gb|ELB02186.1| 50S ribosomal protein L4 [Enterococcus faecium E1590]
gi|430563265|gb|ELB02494.1| 50S ribosomal protein L4 [Enterococcus faecium E1578]
gi|430565639|gb|ELB04785.1| 50S ribosomal protein L4 [Enterococcus faecium E1604]
gi|430568057|gb|ELB07114.1| 50S ribosomal protein L4 [Enterococcus faecium E1613]
gi|430570582|gb|ELB09531.1| 50S ribosomal protein L4 [Enterococcus faecium E1620]
gi|430572864|gb|ELB11700.1| 50S ribosomal protein L4 [Enterococcus faecium E1622]
gi|430577810|gb|ELB16390.1| 50S ribosomal protein L4 [Enterococcus faecium E1623]
gi|430580183|gb|ELB18663.1| 50S ribosomal protein L4 [Enterococcus faecium E1626]
gi|430582382|gb|ELB20809.1| 50S ribosomal protein L4 [Enterococcus faecium E1627]
gi|430586880|gb|ELB25122.1| 50S ribosomal protein L4 [Enterococcus faecium E1630]
gi|430587284|gb|ELB25517.1| 50S ribosomal protein L4 [Enterococcus faecium E1634]
gi|430591960|gb|ELB29987.1| 50S ribosomal protein L4 [Enterococcus faecium E1861]
gi|430592123|gb|ELB30145.1| 50S ribosomal protein L4 [Enterococcus faecium E1731]
gi|430596612|gb|ELB34436.1| 50S ribosomal protein L4 [Enterococcus faecium E1972]
gi|430597815|gb|ELB35597.1| 50S ribosomal protein L4 [Enterococcus faecium E1904]
gi|430602733|gb|ELB40283.1| 50S ribosomal protein L4 [Enterococcus faecium E2039]
gi|430606029|gb|ELB43401.1| 50S ribosomal protein L4 [Enterococcus faecium E2071]
gi|430606766|gb|ELB44104.1| 50S ribosomal protein L4 [Enterococcus faecium E2134]
gi|430611554|gb|ELB48635.1| 50S ribosomal protein L4 [Enterococcus faecium E2297]
gi|430612621|gb|ELB49656.1| 50S ribosomal protein L4 [Enterococcus faecium E2620]
gi|430616053|gb|ELB52978.1| 50S ribosomal protein L4 [Enterococcus faecium E2883]
gi|430618447|gb|ELB55294.1| 50S ribosomal protein L4 [Enterococcus faecium E3083]
gi|430622902|gb|ELB59612.1| 50S ribosomal protein L4 [Enterococcus faecium E3548]
gi|430625343|gb|ELB61983.1| 50S ribosomal protein L4 [Enterococcus faecium E3346]
gi|430629676|gb|ELB66065.1| 50S ribosomal protein L4 [Enterococcus faecium E4215]
gi|430629802|gb|ELB66190.1| 50S ribosomal protein L4 [Enterococcus faecium E1321]
gi|430633978|gb|ELB70123.1| 50S ribosomal protein L4 [Enterococcus faecium E2369]
gi|430636997|gb|ELB73041.1| 50S ribosomal protein L4 [Enterococcus faecium E1644]
gi|430640928|gb|ELB76749.1| 50S ribosomal protein L4 [Enterococcus faecium E2560]
gi|430641463|gb|ELB77265.1| 50S ribosomal protein L4 [Enterococcus faecium E4389]
gi|430647133|gb|ELB82581.1| 50S ribosomal protein L4 [Enterococcus faecium E6012]
gi|430649891|gb|ELB85258.1| 50S ribosomal protein L4 [Enterococcus faecium E6045]
gi|445187287|gb|AGE28929.1| LSU ribosomal protein L4p (L1e) [Enterococcus faecium NRRL B-2354]
Length = 207
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A++ + R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSQNGEITLNEEIFGIEPNESVVYDAIVMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A N + +E +
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAENNLVAIEGLN 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + S+RN+ + ++T +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLSIDSK---VLVVLEKGNDFAALSARNLPNVSVVTSDNVSVLD 185
Query: 240 ILDAETLVLTPST 252
++ + T VL T
Sbjct: 186 VV-SNTKVLATQT 197
>gi|270307843|ref|YP_003329901.1| 50S ribosomal protein L4 [Dehalococcoides sp. VS]
gi|270153735|gb|ACZ61573.1| ribosomal protein L4 [Dehalococcoides sp. VS]
Length = 210
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + +GE I + A+VH+A + N R+GT ST TRGEV+G RK
Sbjct: 3 IPVYNASGEIIKNISISEDVFGVPFNEALVHQAFVAQQANARQGTQSTKTRGEVQGSSRK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
Y QK TG AR G+NR+P+R GGV FGP+PRD+S + KK +R AI ++ +
Sbjct: 63 IYRQKGTGNARMGTNRSPVRRHGGVAFGPRPRDFSKDLPKKMRRQAIRCVLSFKLESGEL 122
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
V+++ FE PKT++ + + L A V N KS+RNI ++K
Sbjct: 123 KVIDQLS--FEEPKTRDMAKIL--AALQVISPALIAVDNPDTNFIKSARNIPSVKTTPAN 178
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D+L + LV+T V
Sbjct: 179 LLNISDMLKNKQLVMTEEAV 198
>gi|261264931|gb|ACX55824.1| 50S ribosomal protein L4 [Staphylococcus epidermidis]
Length = 207
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
Q TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQNGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F FE PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|346312036|ref|ZP_08854030.1| 50S ribosomal protein L4/L1 [Collinsella tanakaei YIT 12063]
gi|345899130|gb|EGX68981.1| 50S ribosomal protein L4/L1 [Collinsella tanakaei YIT 12063]
Length = 208
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 107/188 (56%), Gaps = 3/188 (1%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K+ E L + + V+H + R+GT S TR EV GGG+KP+ QK T
Sbjct: 11 GTKVAEAELAAEVYGIEPNLHVMHHIVTCQQACWRQGTQSAKTRSEVSGGGKKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGVVF PKPR ++ ++N KE +LA+ +A+++ ++V+++
Sbjct: 71 GRARQGSTRSPQWRHGGVVFAPKPRSYAKRMNNKEVKLAMRSALSAKVRDNELVLVDDYG 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
FE+P TK + ++ GL+ K + T +V E N S RNI ++TP N +D+
Sbjct: 131 --FEKPSTKAAVAMLKALGLEGK-RLTIIVREDDINAYLSFRNIPKTFIITPNEANTYDL 187
Query: 241 LDAETLVL 248
++ L++
Sbjct: 188 VNNGALLM 195
>gi|393779748|ref|ZP_10367983.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|429746495|ref|ZP_19279843.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429756988|ref|ZP_19289546.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|392609705|gb|EIW92508.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|429166101|gb|EKY08108.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429169762|gb|EKY11499.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FG
Sbjct: 32 VVYLDVKRYLANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+P+D++ K+ K KRLA +A+++ + +VVE+ + F+ PKTK+F ++ GL+
Sbjct: 92 PRPKDYTQKLTKNVKRLARRSALSAKLQNQALVVVEDLN--FDAPKTKDFTAVVKSLGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K K+ F++ + NV SSRN+ T ++T LN + +++A +VLT S+V L
Sbjct: 150 NK-KSLFVLPNTNNNVYLSSRNVPTSSVVTASELNTYQLVNASNVVLTESSVAVL 203
>gi|322812576|pdb|3PYO|E Chain E, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812629|pdb|3PYR|E Chain E, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The Second 70s
Ribosome.
gi|322812682|pdb|3PYT|E Chain E, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812735|pdb|3PYV|E Chain E, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The Second 70s Ribosome
Length = 202
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
Query: 54 LPILSFTGEKIGETYLDLKSAA-PDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
+P+LS +G + E DL + P VV + +RRGTAST TRGEV GR
Sbjct: 4 IPVLSPSGRR--ELAADLPAEINPHLLWEVVR----WQLAKRRRGTASTKTRGEVAYSGR 57
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K + QK TGRAR G P+ GGGVVFGPKPRD+S + KK ++ ++ A+A A
Sbjct: 58 KIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGK 117
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
++VE F G KTKEF+ + GLD + + L++ +E V +++RN+ + L P
Sbjct: 118 LLLVEAFAG--VNGKTKEFLAWAKEAGLDGSE--SVLLVTGNELVRRAARNLPWVVTLAP 173
Query: 233 RTLNLFDILDAETLVLTPSTVDFLNGRYG 261
LN++DI+ E LV+ + R G
Sbjct: 174 EGLNVYDIVRTERLVMDLDAWEVFQNRIG 202
>gi|409357874|ref|ZP_11236242.1| 50S ribosomal protein L4 [Dietzia alimentaria 72]
Length = 226
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ ++ + R+GT ST TRGEVRGGGRKP+ QK TGRAR+GS R P GGG V G
Sbjct: 40 LMHQVVVAQLAAARQGTHSTKTRGEVRGGGRKPFRQKGTGRARQGSTRAPAYTGGGTVHG 99
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
PKPRD+S + KK K A+ A++ A E VV EF + ++P T +R + +
Sbjct: 100 PKPRDYSQRTPKKMKAAALRGALSDRLAGERIHVVSEFV-EGQKPST----AGVRDFLVS 154
Query: 202 PKQKATFLVMEVSEN--VEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ FLV+ E+ +S N+ + + P LN +D+L+A+ +V T +D
Sbjct: 155 ISDRKKFLVVVGREDSAAWRSVANLDHVHPIAPDQLNTYDVLNADDVVFTVEALD 209
>gi|315225402|ref|ZP_07867216.1| ribosomal protein L4/L1 family protein [Capnocytophaga ochracea
F0287]
gi|420149540|ref|ZP_14656716.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|420159749|ref|ZP_14666547.1| 50S ribosomal protein L4 [Capnocytophaga ochracea str. Holt 25]
gi|314944675|gb|EFS96710.1| ribosomal protein L4/L1 family protein [Capnocytophaga ochracea
F0287]
gi|394753763|gb|EJF37270.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394761800|gb|EJF44128.1| 50S ribosomal protein L4 [Capnocytophaga ochracea str. Holt 25]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FG
Sbjct: 32 VVYLDVKRYLANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+P+D++ K+ K KRLA +A+++ + +VVE+ + F+ PKTK+F ++ GL+
Sbjct: 92 PRPKDYTQKLTKNVKRLARRSALSAKLQNQALVVVEDLN--FDAPKTKDFTAVVKSLGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K K+ F++ + NV SSRN+ T ++T LN + +++A +VLT S+V L
Sbjct: 150 NK-KSLFVLPNTNNNVYLSSRNVPTSSVVTASELNTYQLVNASNVVLTESSVAVL 203
>gi|83814571|ref|YP_445168.1| 50S ribosomal protein L4/L1 family protein [Salinibacter ruber DSM
13855]
gi|109893635|sp|Q2S3R3.1|RL4_SALRD RecName: Full=50S ribosomal protein L4
gi|83755965|gb|ABC44078.1| ribosomal protein L4/L1 family [Salinibacter ruber DSM 13855]
Length = 215
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 93 NKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKIN 152
++R+GT+ T RGEVRG GRK Y QK TG AR G ++P+R GGG G +PRD++ +N
Sbjct: 43 HQRQGTSKTKERGEVRGSGRKLYRQKGTGNARVGDAQSPIRRGGGRAHGARPRDYAHDLN 102
Query: 153 KKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212
+KEKRLA +A++ AA +N V+E F +RP T+ + G++ Q E
Sbjct: 103 QKEKRLARRSALSYKAANDNIQVIENF--SLDRPDTRGLTDLFELLGVE-GQDILLATAE 159
Query: 213 VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
V V SS+N+ + + +++N DILDA+ ++L +D+L
Sbjct: 160 VEREVYLSSQNLPDVNVQEVQSINTVDILDADVVLLQEGALDWL 203
>gi|418610782|ref|ZP_13173889.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU065]
gi|374403619|gb|EHQ74619.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU065]
Length = 207
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V+ F F+ PKTKEF + L+ +K + NVE S+RNI +++ T + L
Sbjct: 126 VDTFG--FKAPKTKEFKNVLTT--LEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGL 181
Query: 236 NLFDILDAETLVLT 249
N+ D+ A+++++T
Sbjct: 182 NVLDLTSADSVIIT 195
>gi|13507905|ref|NP_109854.1| 50S ribosomal protein L4 [Mycoplasma pneumoniae M129]
gi|2500234|sp|P75579.1|RL4_MYCPN RecName: Full=50S ribosomal protein L4
gi|1674370|gb|AAB96313.1| ribosomal protein L4 [Mycoplasma pneumoniae M129]
gi|440453334|gb|AGC04093.1| Ribosomal protein L4 [Mycoplasma pneumoniae M129-B7]
Length = 212
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Query: 83 VHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGP 142
V A++ + + R+GT S LT+GEVRGGG+KPY QK TG+AR+GS R P GGG+VFGP
Sbjct: 34 VFDAVLVEQASWRQGTHSILTKGEVRGGGKKPYKQKHTGKARQGSTRNPHFVGGGIVFGP 93
Query: 143 KP-RDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
KP R++S+K+NKK A+ T + A++NT +V++ KTK ++ ++ L
Sbjct: 94 KPNRNYSLKLNKKAHTAALHTVWSEKLASDNTHLVDQNLFNKTEGKTKVMMQFLKSAKLL 153
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
K F+V ++ N+E+S+ NI +++ +++ D++ A L++ + L G++
Sbjct: 154 DKN-VLFVVNTLNTNLEQSTSNIKNVQVKHLDKVSVRDLMLANALLVEKEVLKALEGKF 211
>gi|398335834|ref|ZP_10520539.1| 50S ribosomal protein L4 [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 211
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 8/186 (4%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A ++ A+ ++ N R G +T TR EVRGGG+KP+SQK TGRAR+GS R P GGG V
Sbjct: 30 ASIYEAIKSENANLRSGNHATKTRSEVRGGGKKPWSQKGTGRARQGSTRAPHWVGGGTVH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPK---TKEFIEAMRR 197
GP+ RD+S K++ K K A+ + + A A V+E+ D PK TK F +
Sbjct: 90 GPQKRDYSYKVSSKLKHRAVLSILGKKAQASAVKVIEDLD-----PKEFSTKSFDSIFKN 144
Query: 198 WGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
L FLV ++ V+KS RNI T+K + + ++ DIL LV+T + + +
Sbjct: 145 MNLRNTGVIGFLVQGENDFVKKSVRNIPTVKYINSKRISCRDILYNRNLVITEAALKEML 204
Query: 258 GRYGVE 263
+YG +
Sbjct: 205 TQYGAQ 210
>gi|146317732|ref|YP_001197444.1| 50S ribosomal protein L4 [Streptococcus suis 05ZYH33]
gi|146319922|ref|YP_001199633.1| 50S ribosomal protein L4 [Streptococcus suis 98HAH33]
gi|253750988|ref|YP_003024129.1| 50S ribosomal protein L4 [Streptococcus suis SC84]
gi|253752888|ref|YP_003026028.1| 50S ribosomal protein L4 [Streptococcus suis P1/7]
gi|253754713|ref|YP_003027853.1| 50S ribosomal protein L4 [Streptococcus suis BM407]
gi|330831921|ref|YP_004400746.1| 50S ribosomal protein L4 [Streptococcus suis ST3]
gi|386577070|ref|YP_006073475.1| 50S ribosomal protein L4 [Streptococcus suis GZ1]
gi|386581117|ref|YP_006077521.1| 50S ribosomal protein L4 [Streptococcus suis SS12]
gi|386583202|ref|YP_006079605.1| 50S ribosomal protein L4 [Streptococcus suis D9]
gi|386585269|ref|YP_006081671.1| 50S ribosomal protein L4 [Streptococcus suis D12]
gi|386587349|ref|YP_006083750.1| 50S ribosomal protein L4 [Streptococcus suis A7]
gi|389855789|ref|YP_006358032.1| 50S ribosomal protein L4 [Streptococcus suis ST1]
gi|403060770|ref|YP_006648986.1| 50S ribosomal protein L4 [Streptococcus suis S735]
gi|417091720|ref|ZP_11956526.1| 50S ribosomal protein L4 [Streptococcus suis R61]
gi|166199915|sp|A4VYP4.1|RL4_STRS2 RecName: Full=50S ribosomal protein L4
gi|166199917|sp|A4VSF5.1|RL4_STRSY RecName: Full=50S ribosomal protein L4
gi|145688538|gb|ABP89044.1| Ribosomal protein L4 [Streptococcus suis 05ZYH33]
gi|145690728|gb|ABP91233.1| Ribosomal protein L4 [Streptococcus suis 98HAH33]
gi|251815277|emb|CAZ50843.1| 50S ribosomal protein L4 [Streptococcus suis SC84]
gi|251817177|emb|CAZ54899.1| 50S ribosomal protein L4 [Streptococcus suis BM407]
gi|251819133|emb|CAR44224.1| 50S ribosomal protein L4 [Streptococcus suis P1/7]
gi|292557532|gb|ADE30533.1| ribosomal protein L4 [Streptococcus suis GZ1]
gi|329306144|gb|AEB80560.1| 50S ribosomal protein L4 [Streptococcus suis ST3]
gi|353533026|gb|EHC02694.1| 50S ribosomal protein L4 [Streptococcus suis R61]
gi|353733263|gb|AER14273.1| 50S ribosomal protein L4 [Streptococcus suis SS12]
gi|353735348|gb|AER16357.1| 50S ribosomal protein L4 [Streptococcus suis D9]
gi|353737415|gb|AER18423.1| 50S ribosomal protein L4 [Streptococcus suis D12]
gi|353739507|gb|AER20514.1| 50S ribosomal protein L4 [Streptococcus suis ST1]
gi|354984510|gb|AER43408.1| 50S ribosomal protein L4 [Streptococcus suis A7]
gi|402808096|gb|AFQ99587.1| 50S ribosomal protein L4 [Streptococcus suis S735]
Length = 207
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +AVV +I+ + R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKQAGEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR ++ K+ +K +RLA+ + + A + V
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPQKVRRLALKSVYSEKVAENKFVAVNSL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ F PKT EF + + +D K ++ E +E S+RNI +K+ T T ++ D
Sbjct: 130 E--FTAPKTAEFAKVLAALSID--SKVLVILEEGNEFAALSARNIPGVKVATATTASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I +A+ L++T + +
Sbjct: 186 IANADKLLVTQAAI 199
>gi|313884448|ref|ZP_07818209.1| 50S ribosomal protein L4 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620232|gb|EFR31660.1| 50S ribosomal protein L4 [Eremococcus coleocola ACS-139-V-Col8]
Length = 205
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 113/193 (58%), Gaps = 6/193 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G GE L+ + ++VV A+I ++R+GT + R VRGGGRKP+ QK T
Sbjct: 11 GSNAGEIELNDAIFGIEPNQSVVVDAVIMQRASQRQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG VFGP PR +S K+ KK +RLAI +A++ +VV++
Sbjct: 71 GRARQGSIRSPQWVGGGTVFGPTPRSYSYKLPKKMRRLAIRSALSQKVIDNEFVVVDQ-- 128
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDI 240
E KTKEF + LD +K ++ + +E V +++RNI +K++ +N+ D+
Sbjct: 129 --LEATKTKEFKAILS--NLDLNRKVLLVLEDNNEAVFRAARNIPNVKVIDQGNVNVLDV 184
Query: 241 LDAETLVLTPSTV 253
++ + +++T + +
Sbjct: 185 VNYDKVLITQAAL 197
>gi|111115308|ref|YP_709926.1| 50S ribosomal protein L4 [Borrelia afzelii PKo]
gi|384206972|ref|YP_005592694.1| ribosomal L4/L1 family protein [Borrelia afzelii PKo]
gi|123145710|sp|Q0SN28.1|RL4_BORAP RecName: Full=50S ribosomal protein L4
gi|110890582|gb|ABH01750.1| ribosomal protein L4 [Borrelia afzelii PKo]
gi|342856856|gb|AEL69704.1| ribosomal L4/L1 family protein [Borrelia afzelii PKo]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+ S G++I LD + + + ++ A+ ++ N R GT+ST TR EVRG +KP+
Sbjct: 5 VFSKDGKEIRTINLDDRVFNIEISHGSIYNAIKNELSNLRVGTSSTKTRSEVRGSSKKPW 64
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTI- 174
QK TGRAR G+ R P+ GGG+ GPKPRD+S ++ KK KRLA + ++ A+ EN
Sbjct: 65 KQKGTGRARVGTRRNPVWIGGGIALGPKPRDYSYRLPKKVKRLAFKSVLSLRASDENNFK 124
Query: 175 VVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRT 234
V+E F+ E KTK+ ++ + K L+ + ++++ +NI LK+L+
Sbjct: 125 VIENFN--IESGKTKDLALIIKNFA-SFNGKVVILLGNDDQMIKRAGKNIRDLKILSFDK 181
Query: 235 LNLFDILDAETLVLTPSTVDFLNGRY 260
L + D+ A+ L+ S V+ LN Y
Sbjct: 182 LRVVDLFYAKNLIALESAVNKLNEFY 207
>gi|257790718|ref|YP_003181324.1| 50S ribosomal protein L4 [Eggerthella lenta DSM 2243]
gi|317488571|ref|ZP_07947116.1| ribosomal protein L4/L1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325832045|ref|ZP_08165142.1| 50S ribosomal protein L4 [Eggerthella sp. HGA1]
gi|257474615|gb|ACV54935.1| ribosomal protein L4/L1e [Eggerthella lenta DSM 2243]
gi|316912313|gb|EFV33877.1| ribosomal protein L4/L1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325486366|gb|EGC88818.1| 50S ribosomal protein L4 [Eggerthella sp. HGA1]
Length = 207
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 105/168 (62%), Gaps = 4/168 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H+ + + R+GT T TRG+VRGGG+KP+ QK TGRAR+G+ R P GGG VFG
Sbjct: 32 VMHQVVRAQRASWRQGTHDTKTRGQVRGGGKKPWRQKGTGRARQGTIRAPQWAGGGTVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ ++N KE +LA+ +A+++ A VV+ F+ FE+P TK + A++ GL+
Sbjct: 92 PHPRSYAFRVNNKEVKLAMRSALSAKLADGELFVVDAFN--FEKPSTKAAVAALKALGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
++ T ++ + N S RNI T+ +L N ++++D + LV T
Sbjct: 150 --RRTTLVIDDEDVNTYLSFRNIPTVNILPVSAANTYELIDNKALVFT 195
>gi|418009015|ref|ZP_12648859.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei UW4]
gi|410544928|gb|EKQ19238.1| LSU ribosomal protein L4p (L1e) [Lactobacillus casei UW4]
Length = 207
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R V GGGRKP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAVVMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR ++ K+ KK +RLAI + ++ + +VV+ + F+ PKTK F + GL
Sbjct: 92 PTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLN--FDAPKTKAFATVLD--GLK 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
KA ++ +E K++RN+ +K++ +N+ D++D + L+LT S +
Sbjct: 148 VSDKALVVLEGGNEVAAKAARNLPNVKVVPAEGINVLDVVDYKKLILTQSAL 199
>gi|373463289|ref|ZP_09554916.1| 50S ribosomal protein L4 [Lactobacillus kisonensis F0435]
gi|371764977|gb|EHO53342.1| 50S ribosomal protein L4 [Lactobacillus kisonensis F0435]
Length = 207
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 105/173 (60%), Gaps = 6/173 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT S R VRGGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAILMQRASLRQGTHSVKNRSAVRGGGKKPWRQKGTGRARQGSIRSPQWRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR +S + KK RLA+ + ++ + + +VV+ F+ PKTKEF E + + +
Sbjct: 92 PTPRSYSYHLPKKVSRLALKSVLSEKVSDDKLVVVDAL--AFDTPKTKEFAEMLDKLNVS 149
Query: 202 PKQKATFLVME-VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K T +V+E +E S+RN+ +K+++ + +N D+ D + +++T + +
Sbjct: 150 TK---TLVVLEDDNEKALLSARNLENVKVVSAKGINTLDVADHDKVIITKAAL 199
>gi|409196774|ref|ZP_11225437.1| 50S ribosomal protein L4 [Marinilabilia salmonicolor JCM 21150]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N R+GT + R E+ G RK QK TG AR GS ++P+ GGG VFGP+PRD+ K
Sbjct: 41 LANNRQGTHKSKERAEIAGSTRKIKKQKGTGTARAGSVKSPVFRGGGRVFGPQPRDYRFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K+LA +A+A A +VVE+F + E PKTKEF+ + ++ K + +V
Sbjct: 101 LNKKLKQLARKSALAYKAKNNAIVVVEDF--QMESPKTKEFVNIRKNLNVEGKS-SLVVV 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
++ NV SSRN+ ++ T LN + I+ A++LVL S+V+
Sbjct: 158 KDLDRNVYLSSRNVPKSEVATTAALNTYSIMKAQSLVLAESSVE 201
>gi|343085265|ref|YP_004774560.1| 50S ribosomal protein L4 [Cyclobacterium marinum DSM 745]
gi|342353799|gb|AEL26329.1| ribosomal protein L4/L1e [Cyclobacterium marinum DSM 745]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 8/206 (3%)
Query: 54 LPILSFTGEKIGETYL---DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
L IL TGE+ G D+ + P+ ++ + + N+R+GT + R E+ G
Sbjct: 3 LAILKQTGEETGRKITLSEDIFAIEPNDH--AIYLDVKQYLANRRQGTHKSKERAEIAGS 60
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
+K QK TG AR GS ++P+ GGG VFGPKPRD+S K+NKK K++A +A+ + A
Sbjct: 61 TKKIKKQKGTGSARAGSIKSPIFRGGGRVFGPKPRDYSFKLNKKLKQVARKSAL-TYKAK 119
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
EN +V+ E D F+ PKTK++I + + L K K +V E + NV SSRN+ K+
Sbjct: 120 ENGLVILE-DLVFDAPKTKDYINLLAKLSLSDK-KTLLVVGENNPNVYLSSRNVQKAKVR 177
Query: 231 TPRTLNLFDILDAETLVLTPSTVDFL 256
LN +++LDA++LVL V L
Sbjct: 178 VFSELNTYELLDADSLVLCEGAVSKL 203
>gi|359686567|ref|ZP_09256568.1| 50S ribosomal protein L4 [Leptospira santarosai str. 2000030832]
gi|410450074|ref|ZP_11304117.1| 50S ribosomal protein L4 [Leptospira sp. Fiocruz LV3954]
gi|418743548|ref|ZP_13299909.1| 50S ribosomal protein L4 [Leptospira santarosai str. CBC379]
gi|418752229|ref|ZP_13308500.1| 50S ribosomal protein L4 [Leptospira santarosai str. MOR084]
gi|421113270|ref|ZP_15573718.1| 50S ribosomal protein L4 [Leptospira santarosai str. JET]
gi|422002002|ref|ZP_16349242.1| 50S ribosomal protein L4 [Leptospira santarosai serovar Shermani
str. LT 821]
gi|409967437|gb|EKO35263.1| 50S ribosomal protein L4 [Leptospira santarosai str. MOR084]
gi|410016083|gb|EKO78172.1| 50S ribosomal protein L4 [Leptospira sp. Fiocruz LV3954]
gi|410795571|gb|EKR93466.1| 50S ribosomal protein L4 [Leptospira santarosai str. CBC379]
gi|410801445|gb|EKS07615.1| 50S ribosomal protein L4 [Leptospira santarosai str. JET]
gi|417259459|gb|EKT88836.1| 50S ribosomal protein L4 [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456877273|gb|EMF92311.1| 50S ribosomal protein L4 [Leptospira santarosai str. ST188]
Length = 211
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A ++ A+ + N R G +T TR EVRGGG+KP++QK TGRAR+GS R P GGG V
Sbjct: 30 ASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWAQKGTGRARQGSTRAPHWVGGGTVH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP+ RD+S K++ K K A+ + + A A V+E+ D K TK F + L
Sbjct: 90 GPQKRDYSYKVSSKLKHRAVLSILGKKAQASAVKVIEDLDPK--EYSTKSFDSIFKNMNL 147
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
FLV S+ V+KS RNI T+K + + ++ DIL LV+T + + + +Y
Sbjct: 148 RNTGVIGFLVQGESDFVKKSVRNIPTVKYINSKRISCRDILYNRNLVITEAALKEMLTQY 207
Query: 261 GVE 263
G +
Sbjct: 208 GAQ 210
>gi|288929339|ref|ZP_06423184.1| ribosomal protein L4/L1 family protein [Prevotella sp. oral taxon
317 str. F0108]
gi|288329441|gb|EFC68027.1| ribosomal protein L4/L1 family protein [Prevotella sp. oral taxon
317 str. F0108]
Length = 209
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 3/168 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GTA T R E+ G RK QK G ARRG +P+ GG VFGPKPRD+S K
Sbjct: 41 LANQRQGTAKTKERSEMSGSTRKLGRQKGGGGARRGDINSPVLVGGARVFGPKPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A IVVE+F+ PKTKE++ ++ L + K+ L+
Sbjct: 101 LNKKVKVLARKSALSYKAKENAIIVVEDFE--MAAPKTKEYVNIVKNLQLGER-KSLLLL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258
V++NV S+RN+ +++T LN + +L+A+ LV+T +++ ++G
Sbjct: 158 PNVNKNVYLSARNLQRSEVMTASALNAYKVLNADVLVITEKSLEAIDG 205
>gi|226226280|ref|YP_002760386.1| 50S ribosomal protein L4 [Gemmatimonas aurantiaca T-27]
gi|226089471|dbj|BAH37916.1| 50S ribosomal protein L4 [Gemmatimonas aurantiaca T-27]
Length = 213
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
V+H+A+ + N+R+GTA T TRGEV GG +KP+ QK TGRAR+GS R P PGGG VFG
Sbjct: 38 VMHQAVKAFLANRRQGTAKTKTRGEVTGGNQKPWKQKGTGRARQGSTRAPNWPGGGTVFG 97
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PR ++ + K+ + LA +A+ + A +VVE + F PKTK E + G+
Sbjct: 98 PQPRSYTQIVPKQVRVLARKSALNARARENAVVVVEALN--FSAPKTKAMTELFTKLGVL 155
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
K K L V NV S+RN+G ++ N + IL ++ +V+ S +
Sbjct: 156 GK-KVLVLTDGVKPNVYLSARNLGQAHVMPYSDANTYHILWSDVVVIESSAL 206
>gi|402549106|ref|ZP_10845959.1| 50S ribosomal protein L4 [SAR86 cluster bacterium SAR86C]
Length = 206
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 77 DTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGG 136
D ++VH+A+++ M R+GT+ TR EVRGGG+KP+ QK TGRAR G+ R+PL GG
Sbjct: 24 DFNESLVHQAVVSFMAGARQGTSKQKTRSEVRGGGKKPFRQKGTGRARAGTIRSPLWRGG 83
Query: 137 GVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMR 196
GV F PRD+S KINKK R AI + + + +E+ ++PKTKE + +
Sbjct: 84 GVTFAATPRDYSKKINKKMYRAAIRSIFSELLRQGRLVAIEK--PVLDKPKTKEIVSLLN 141
Query: 197 RWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
+ L K ++ E+ N+ S+RNI + ++T R +N ++L A + +T
Sbjct: 142 EFSLS---KVLIIIDELDMNLYLSTRNIPNVDVITVREINPVNLLKANKVAVT 191
>gi|429753414|ref|ZP_19286221.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429173695|gb|EKY15207.1| 50S ribosomal protein L4 [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 209
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV+ + + NKR+GT R EV G RK QK TG AR GS ++P+ GGG +FG
Sbjct: 32 VVYLDVKRYLANKRQGTHKAKERNEVAGSTRKIKKQKGTGTARAGSVKSPVFVGGGRIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+P+D++ K+ K KRLA +A+++ + +VVE+ + F PKTK+F ++ GL+
Sbjct: 92 PRPKDYTQKLTKNVKRLARRSALSAKVQNQALVVVEDLN--FNAPKTKDFTAVVKSLGLE 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFL 256
K K+ F++ + NV SSRN+ T ++T LN + +++A +VLT S+V L
Sbjct: 150 NK-KSLFVLPNTNNNVYLSSRNVPTSSVVTASELNTYQVVNAAKVVLTESSVAVL 203
>gi|332669518|ref|YP_004452526.1| 50S ribosomal protein L4/L1e [Cellulomonas fimi ATCC 484]
gi|332338556|gb|AEE45139.1| ribosomal protein L4/L1e [Cellulomonas fimi ATCC 484]
Length = 229
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 56 ILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
+L G+K G+ L D+++ P ++H+ ++ + R+GT T TRGEVRGG
Sbjct: 9 VLDPQGKKAGQAELPADVFDVQTNVP-----LIHQVVVAQLAAARQGTHDTKTRGEVRGG 63
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
G+KPY QK TGRAR+GS R P GGGVV GP PRD++ + KK K A+ A++ A A
Sbjct: 64 GKKPYKQKGTGRARQGSTRAPQFAGGGVVHGPTPRDYTQRTPKKMKAAALRGALSDRARA 123
Query: 171 ENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKML 230
VV F P TK + + L ++ +V E KS RN+ + +L
Sbjct: 124 GRVHVVSGF-APGTAPSTKSALAVLDN--LSGRKNVLVVVERQDEITWKSLRNVERVHLL 180
Query: 231 TPRTLNLFDILDAETLVLTPSTVD-FLNG 258
LN +D+L ++ +V T +D FL G
Sbjct: 181 VADQLNTYDVLISDDVVFTQGALDAFLAG 209
>gi|402549139|ref|ZP_10845992.1| 50S ribosomal protein L4 [SAR86 cluster bacterium SAR86C]
gi|37912951|gb|AAR05283.1| ribosomal protein L4 [uncultured marine gamma proteobacterium
EB000-45B06]
gi|40063178|gb|AAR38015.1| ribosomal protein L4/L1 family [uncultured marine bacterium 562]
Length = 204
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 77 DTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGG 136
D ++VH+A+++ M R+GT+ TR EVRGGG+KP+ QK TGRAR G+ R+PL GG
Sbjct: 24 DFNESLVHQAVVSFMAGARQGTSKQKTRSEVRGGGKKPFRQKGTGRARAGTIRSPLWRGG 83
Query: 137 GVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMR 196
GV F PRD+S KINKK R AI + + + +E+ ++PKTKE + +
Sbjct: 84 GVTFAATPRDYSKKINKKMYRAAIRSIFSELLRQGRLVAIEK--PVLDKPKTKEIVSLLN 141
Query: 197 RWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 249
+ L K ++ E+ N+ S+RNI + ++T R +N ++L A + +T
Sbjct: 142 EFSL---SKVLIIIDELDMNLYLSTRNIPNVDVITVREINPVNLLKANKVAVT 191
>gi|84494785|ref|ZP_00993904.1| 50S ribosomal protein L4 [Janibacter sp. HTCC2649]
gi|84384278|gb|EAQ00158.1| 50S ribosomal protein L4 [Janibacter sp. HTCC2649]
Length = 331
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 6/179 (3%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ ++ + R+GT ST TRGEVRGGGRKP+ QK TGRAR GS R P GGGVV G
Sbjct: 26 LIHQVVVAQLAAARQGTHSTKTRGEVRGGGRKPHRQKGTGRARAGSTRAPHWTGGGVVHG 85
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PRD+S + KK K A+ A++ A VV + + P TKE + + GL
Sbjct: 86 PTPRDYSQRTPKKMKAAALRGALSDRARHGRIHVVASLV-QGDAPSTKEAVALLA--GL- 141
Query: 202 PKQKATFLVMEVSENVE-KSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNG 258
++K +V++ S+ V KS RN+ L ++ LN +D+L A+ +V T + D F+ G
Sbjct: 142 TERKNMLVVLDRSDIVSLKSVRNLENLHVIVADQLNTYDVLCADDVVFTQAAFDAFVAG 200
>gi|254495342|ref|ZP_05108266.1| 50S ribosomal protein L4 [Polaribacter sp. MED152]
gi|85819696|gb|EAQ40853.1| 50S ribosomal protein L4 [Polaribacter sp. MED152]
Length = 209
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK QK TG AR GS ++ + GGG +FGP+PR++S K
Sbjct: 41 LANQRQGTHKSKERAEIVGSTRKIKKQKGTGTARAGSIKSGVFRGGGRMFGPRPRNYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NK KRLA +A++ A +N +VVE+F+ F+ PKTK F++ ++ LD K K+ F++
Sbjct: 101 LNKNLKRLARKSALSIQANDKNLVVVEDFN--FDTPKTKNFVDVLKSLELDAK-KSLFVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLN 257
+ NV SSRN+ K++ +N + +L+A +V+T +++ +N
Sbjct: 158 DGENANVYLSSRNLKNSKVIKASEINTYGVLNANKIVITEGSLEGIN 204
>gi|418326222|ref|ZP_12937413.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU071]
gi|365226194|gb|EHM67416.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU071]
Length = 207
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
V+ F FE P TKEF + +Q LV+ SE NVE S+RNI +++ T +
Sbjct: 126 VDTFG--FEAPTTKEFKNVLTTL----EQPKKVLVVTESEDVNVELSARNIPGVQVTTAQ 179
Query: 234 TLNLFDILDAETLVLT 249
LN+ D+ A+++++T
Sbjct: 180 GLNVLDLTSADSVIIT 195
>gi|148544695|ref|YP_001272065.1| 50S ribosomal protein L4 [Lactobacillus reuteri DSM 20016]
gi|184154048|ref|YP_001842389.1| 50S ribosomal protein L4 [Lactobacillus reuteri JCM 1112]
gi|194466952|ref|ZP_03072939.1| ribosomal protein L4/L1e [Lactobacillus reuteri 100-23]
gi|227363818|ref|ZP_03847925.1| ribosomal protein L4 [Lactobacillus reuteri MM2-3]
gi|227543622|ref|ZP_03973671.1| ribosomal protein L4 [Lactobacillus reuteri CF48-3A]
gi|325683029|ref|ZP_08162545.1| 50S ribosomal protein L4 [Lactobacillus reuteri MM4-1A]
gi|338202946|ref|YP_004649091.1| 50S ribosomal protein L4 [Lactobacillus reuteri SD2112]
gi|423334763|ref|ZP_17312541.1| 50S ribosomal protein L4 [Lactobacillus reuteri ATCC 53608]
gi|166990950|sp|A5VLK4.1|RL4_LACRD RecName: Full=50S ribosomal protein L4
gi|226730679|sp|B2G8X7.1|RL4_LACRJ RecName: Full=50S ribosomal protein L4
gi|148531729|gb|ABQ83728.1| LSU ribosomal protein L4P [Lactobacillus reuteri DSM 20016]
gi|183225392|dbj|BAG25909.1| 50S ribosomal protein L4 [Lactobacillus reuteri JCM 1112]
gi|194453988|gb|EDX42885.1| ribosomal protein L4/L1e [Lactobacillus reuteri 100-23]
gi|227071175|gb|EEI09491.1| ribosomal protein L4 [Lactobacillus reuteri MM2-3]
gi|227186462|gb|EEI66533.1| ribosomal protein L4 [Lactobacillus reuteri CF48-3A]
gi|324977379|gb|EGC14330.1| 50S ribosomal protein L4 [Lactobacillus reuteri MM4-1A]
gi|336448186|gb|AEI56801.1| 50S ribosomal protein L4 [Lactobacillus reuteri SD2112]
gi|337728284|emb|CCC03379.1| 50S ribosomal protein L4 [Lactobacillus reuteri ATCC 53608]
Length = 207
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
VV A++ + R+GT + R V GGG+KP+ QK TGRAR+GS R+P GGG+VFG
Sbjct: 32 VVFDAILRQRASLRQGTHAVKNRSAVSGGGKKPWRQKGTGRARQGSIRSPQFRGGGIVFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P PR + + +K ++LAI +A++ + +VV+ + F+ PKTKEF + M L+
Sbjct: 92 PTPRSYKYSLPRKVRQLAIKSALSQKVLDNSFVVVDALN--FDAPKTKEFADVM--GNLN 147
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+K +V + +N S+RN+ ++TP +N+ +++D + +V+T S +
Sbjct: 148 VAEKTLVVVTDDDKNAALSARNLANATVVTPAGVNILNVVDNQKIVITKSAL 199
>gi|336319936|ref|YP_004599904.1| ribosomal protein L4/L1e [[Cellvibrio] gilvus ATCC 13127]
gi|336103517|gb|AEI11336.1| ribosomal protein L4/L1e [[Cellvibrio] gilvus ATCC 13127]
Length = 230
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G+K G L + T ++H+ ++ + R+GT T TRGEVRGGG+KPY
Sbjct: 9 VLDPQGKKAGTADLPAEVFDAQTNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGKKPY 68
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R P GGG V GP+PRD+S + KK K A+ A++ A A V
Sbjct: 69 KQKGTGRARQGSTRAPQFAGGGTVHGPQPRDYSQRTPKKMKAAALRGALSDRARAGRVHV 128
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
V F P TK + + L ++ +V E KS RN+ + +L L
Sbjct: 129 VSGF-APGTAPSTKAALAVLDN--LSGRRHVLVVVERTDEITWKSLRNVERVHLLVADQL 185
Query: 236 NLFDILDAETLVLTPSTVD-FLNG 258
N +D+L ++ +V T +D FL G
Sbjct: 186 NTYDVLVSDDVVFTQGALDAFLAG 209
>gi|406901126|gb|EKD43876.1| 50S ribosomal protein L4 [uncultured bacterium]
Length = 209
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 9/199 (4%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+ + + G++ GE + +VH+ + N+R A T RGEV GGG+K
Sbjct: 3 IKVYNLAGKETGEMEVSDTVFGVKIKPEMVHQVFVQQTNNQREPWADTKNRGEVSGGGKK 62
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGP-KPRDWSIKINKKEKRLAISTAIASAAAAEN 172
P+ QK TGRAR GS R+P+ GGGV FGP R++ KINKK ++ AI + A + N
Sbjct: 63 PWQQKGTGRARHGSIRSPIWKGGGVAFGPLTDRNYKTKINKKTRQAAIRMCLTDKAQSGN 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVM--EVSENVEKSSRNIGTLKML 230
+V+E+F FE+PKT+ F + ++ P + TFLV+ + S+++ + S+N+ +K L
Sbjct: 123 LMVLEDFT--FEKPKTQLFAKFLKTL---PAKLKTFLVLTADKSDDIMRMSKNLKVVKTL 177
Query: 231 TPRTLNLFDILDAETLVLT 249
+ N+ D+L ++ ++LT
Sbjct: 178 RAQDSNVLDLL-SKGVILT 195
>gi|345881590|ref|ZP_08833106.1| 50S ribosomal protein L4 [Prevotella oulorum F0390]
gi|343919212|gb|EGV29963.1| 50S ribosomal protein L4 [Prevotella oulorum F0390]
Length = 209
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
Query: 94 KRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINK 153
+R+GTA + R E+ G RK QK G ARRG +P+ GG VFGPKPR++ K+NK
Sbjct: 44 QRQGTAKSKERSELSGSTRKLGRQKGGGGARRGDINSPVLVGGARVFGPKPRNYDFKLNK 103
Query: 154 KEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEV 213
K K LA +A++ A +VVE+F+ FE PKTKEF+ + ++ K K L+ EV
Sbjct: 104 KVKVLARKSALSYKAQENAIVVVEDFN--FEAPKTKEFVNLAKNLKVEGK-KTLVLLSEV 160
Query: 214 SENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258
++NV S+RNI ++ LN + +L+A+ LVLT S++ ++G
Sbjct: 161 NKNVYLSARNIQRADVMLATALNSYKVLNADVLVLTESSLKAIDG 205
>gi|319948722|ref|ZP_08022843.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
gi|319437624|gb|EFV92623.1| 50S ribosomal protein L4 [Dietzia cinnamea P4]
Length = 229
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 106/178 (59%), Gaps = 13/178 (7%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H+ ++ + R+GT ST TRGEV GGGRKP+ QK TGRAR+GS R P GGG V G
Sbjct: 40 LMHQVVVAQLAAARQGTHSTKTRGEVSGGGRKPFRQKGTGRARQGSTRAPAYTGGGTVHG 99
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKT---KEFIEAMRRW 198
PKPRD+S + KK K A+ A++ AA+E VV EF + ++P T ++F+ +
Sbjct: 100 PKPRDYSQRTPKKMKAAALRGALSDRAASERIHVVTEFV-EGQKPSTSGVRDFLGTL--- 155
Query: 199 GLDPKQKATFLVMEVSENVE--KSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ FL++ E++ +S+ N+ + + P LN +D+L+A+ +V + +D
Sbjct: 156 ----SDRKKFLIVVGREDLAAWRSAANLDHVHPIAPDQLNTYDVLNADDVVFSVEALD 209
>gi|260584417|ref|ZP_05852164.1| 50S ribosomal protein L4/L1 [Granulicatella elegans ATCC 700633]
gi|260157935|gb|EEW93004.1| 50S ribosomal protein L4/L1 [Granulicatella elegans ATCC 700633]
Length = 207
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K GE L+ + VV A+I + R+GT + R V GGGRKP+ QK T
Sbjct: 11 GTKNGEIELNSDIFGIEPNENVVFDAVIMQRASLRQGTHAVKNRSAVSGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGG+VFGP PR +S K+ +K +RLAI + ++ + +VVE
Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVLDQKLVVVEAL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNIGTLKMLTPRTLNLFD 239
+F+ PKTKEF + + +D K +V+E S E + ++RNI + ++ + + D
Sbjct: 130 -QFDAPKTKEFAQVLANLKVDTK---VLVVVESSNEFAQLAARNIPNVTVVDETQVTVLD 185
Query: 240 ILDAETLVLTPSTV 253
+++ + LVLT + +
Sbjct: 186 VVNNDKLVLTQAAL 199
>gi|387132914|ref|YP_006298886.1| 50S ribosomal protein L4 [Prevotella intermedia 17]
gi|386375762|gb|AFJ08080.1| 50S ribosomal protein L4 [Prevotella intermedia 17]
Length = 209
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ ++R+GTA T R E G RK QK G ARRG +P+ GGG VFGP PRD+S K
Sbjct: 41 LADQRQGTAKTKERSEHAGSTRKLGRQKGGGGARRGDINSPVLVGGGRVFGPTPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+A A IVVE+FD F+ PKTKEFI + +D K K ++
Sbjct: 101 LNKKVKVLARKSALAYKAKESAIIVVEDFD--FDAPKTKEFINIAKNLKVDGK-KVLLVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
E NV S+RN+ ++ T +N + IL A+ LV+T +++
Sbjct: 158 PEAQNNVYLSARNLQKTQVTTAAQVNTYGILHADVLVVTENSL 200
>gi|55821904|ref|YP_140346.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMG 18311]
gi|55823820|ref|YP_142261.1| 50S ribosomal protein L4 [Streptococcus thermophilus CNRZ1066]
gi|116628597|ref|YP_821216.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMD-9]
gi|228478067|ref|ZP_04062678.1| ribosomal protein L4/L1 family protein [Streptococcus salivarius
SK126]
gi|322515868|ref|ZP_08068810.1| 50S ribosomal protein L4 [Streptococcus vestibularis ATCC 49124]
gi|340399804|ref|YP_004728829.1| 50S ribosomal protein L4 [Streptococcus salivarius CCHSS3]
gi|386087545|ref|YP_006003419.1| 50S ribosomal protein L4 [Streptococcus thermophilus ND03]
gi|386345660|ref|YP_006041824.1| 50S ribosomal protein L4 [Streptococcus thermophilus JIM 8232]
gi|387760396|ref|YP_006067373.1| 50S ribosomal protein L4 [Streptococcus salivarius 57.I]
gi|387910636|ref|YP_006340942.1| 50S ribosomal protein L4 [Streptococcus thermophilus MN-ZLW-002]
gi|418018805|ref|ZP_12658360.1| 50S ribosomal protein L4 [Streptococcus salivarius M18]
gi|421453362|ref|ZP_15902718.1| LSU ribosomal protein L1E (L4P) [Streptococcus salivarius K12]
gi|445383355|ref|ZP_21427465.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5460]
gi|445396102|ref|ZP_21429198.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5461]
gi|81558868|sp|Q5LXR2.1|RL4_STRT1 RecName: Full=50S ribosomal protein L4
gi|81560055|sp|Q5M2B4.1|RL4_STRT2 RecName: Full=50S ribosomal protein L4
gi|122266809|sp|Q03IF2.1|RL4_STRTD RecName: Full=50S ribosomal protein L4
gi|55737889|gb|AAV61531.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMG 18311]
gi|55739805|gb|AAV63446.1| 50S ribosomal protein L4 [Streptococcus thermophilus CNRZ1066]
gi|116101874|gb|ABJ67020.1| LSU ribosomal protein L4P [Streptococcus thermophilus LMD-9]
gi|228250247|gb|EEK09500.1| ribosomal protein L4/L1 family protein [Streptococcus salivarius
SK126]
gi|312279258|gb|ADQ63915.1| 50S ribosomal protein L4 [Streptococcus thermophilus ND03]
gi|322125655|gb|EFX96982.1| 50S ribosomal protein L4 [Streptococcus vestibularis ATCC 49124]
gi|338743797|emb|CCB94307.1| 50S ribosomal protein L4 [Streptococcus salivarius CCHSS3]
gi|339279121|emb|CCC20869.1| 50S ribosomal protein L4 [Streptococcus thermophilus JIM 8232]
gi|339291163|gb|AEJ52510.1| 50S ribosomal protein L4 [Streptococcus salivarius 57.I]
gi|345526247|gb|EGX29559.1| 50S ribosomal protein L4 [Streptococcus salivarius M18]
gi|387575571|gb|AFJ84277.1| 50S ribosomal protein L4 [Streptococcus thermophilus MN-ZLW-002]
gi|400181671|gb|EJO15938.1| LSU ribosomal protein L1E (L4P) [Streptococcus salivarius K12]
gi|444748223|gb|ELW73201.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5461]
gi|444748260|gb|ELW73237.1| 50S ribosomal protein L4 [Streptococcus thermophilus MTCC 5460]
Length = 207
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG+++ L+ + +VV +I+ + R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEVSTVELNDAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+ +K +RLA+ + ++ A + + VE
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
F PKT EF + +D K +V E ++ E S+RN+ + + TP T ++ D
Sbjct: 130 S--FAAPKTAEFANVLSALSID--SKVLVIVEEGNKFAELSARNLANVTVATPATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++A+ L++T +
Sbjct: 186 IVNADKLLVTKEAI 199
>gi|259502532|ref|ZP_05745434.1| 50S ribosomal protein L4 [Lactobacillus antri DSM 16041]
gi|259169484|gb|EEW53979.1| 50S ribosomal protein L4 [Lactobacillus antri DSM 16041]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 4/159 (2%)
Query: 95 RRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKK 154
R+GT + R V GGG+KP+ QK TGRAR+GS R P GGG+VFGP PR + + +K
Sbjct: 45 RQGTHAVKNRSAVSGGGKKPWRQKGTGRARQGSIRAPQFRGGGIVFGPSPRSYKYNLPRK 104
Query: 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214
++LAI +A++ +VV+ + F+ PKTKEF M L+ +KA +V E
Sbjct: 105 VRQLAIKSALSQKVLDNALVVVDALN--FDAPKTKEFAGVMNN--LNVAEKALVVVTEDD 160
Query: 215 ENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+N S+RN+ ++TP +N+ ++ DA+ +++T S +
Sbjct: 161 KNAALSARNLANATVVTPAGVNILNVADAQKVIITKSAL 199
>gi|375091979|ref|ZP_09738266.1| 50S ribosomal protein L4 [Helcococcus kunzii ATCC 51366]
gi|374562197|gb|EHR33529.1| 50S ribosomal protein L4 [Helcococcus kunzii ATCC 51366]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 4/198 (2%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G +G L + VV+ + + NKR+GT S TR EVRGGG+KP+
Sbjct: 6 VLDIKGNSVGNIDLPESLFGSEINEHVVYEVVKNQLANKRQGTQSAKTRAEVRGGGKKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+GS R+P GGG VF PKPR++S + KK +RLA+ + + S E IV
Sbjct: 66 RQKGTGRARQGSIRSPQWRGGGTVFAPKPRNYSYTVPKKVRRLALKSLLTSKVVEEEIIV 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTL 235
+ E + TKE + ++ + A ++ E +EN+ KS RNI ++++ +
Sbjct: 126 LNELN--LSEISTKEAKTILG--AINADKTAYVVIDEANENIYKSFRNIDGVEVVVVNNM 181
Query: 236 NLFDILDAETLVLTPSTV 253
N++D++ +L++T + V
Sbjct: 182 NVYDLIKHNSLIITEAAV 199
>gi|58336631|ref|YP_193216.1| 50S ribosomal protein L4 [Lactobacillus acidophilus NCFM]
gi|227903188|ref|ZP_04020993.1| 50S ribosomal protein L4 [Lactobacillus acidophilus ATCC 4796]
gi|75433039|sp|Q5FM89.1|RL4_LACAC RecName: Full=50S ribosomal protein L4
gi|58253948|gb|AAV42185.1| 50S ribosomal protein L4 [Lactobacillus acidophilus NCFM]
gi|227868993|gb|EEJ76414.1| 50S ribosomal protein L4 [Lactobacillus acidophilus ATCC 4796]
Length = 205
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ GE L+ K + VV A+I KR+GT+ R VRGGG+K
Sbjct: 4 LKVMDQNGKDSGEVTLNDKVFGIEPNDNVVFEAIIRQRAGKRQGTSKVKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R P GGG VFGP PR ++ + +K++RLAI + ++ +
Sbjct: 64 PWRQKGTGRARQGSIRAPQWRGGGTVFGPTPRSYAYTMPRKQRRLAIKSVLSQKLIDNDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTKE + + D K L++ NV+ S+RN+ +K++
Sbjct: 124 IVLDKL--TMSAPKTKELVSMLNSLNADGK----VLIVSDDNNVQLSARNLAKVKVVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ L+LT V
Sbjct: 178 GLNVEDAVNYGKLILTQDAV 197
>gi|429204130|ref|ZP_19195423.1| 50S ribosomal protein L4 [Lactobacillus saerimneri 30a]
gi|428147629|gb|EKW99852.1| 50S ribosomal protein L4 [Lactobacillus saerimneri 30a]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G K G+ L+ + VV A++ + R+GT R EVRGGGRKP+ QK T
Sbjct: 11 GSKNGDVQLNDGIFGIEPNNNVVFDAVLMQRASLRQGTHDVKNRSEVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ +K +RLAI + ++ E+ +VV++
Sbjct: 71 GRARQGSIRSPQWVGGGVVFGPTPRSYSYKLPRKVRRLAIKSVLSQKVIDESLVVVDQL- 129
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP-RTLNLFD 239
+FE+PKTKEF + + ++ K +V+E V + + P + LN+ D
Sbjct: 130 -QFEQPKTKEFAQVLANLNVNEK---VLVVLEDDNKVAALAARNLANVTVIPAKGLNVLD 185
Query: 240 ILDAETLVLT 249
+++ +V+T
Sbjct: 186 VINNGKMVIT 195
>gi|408828968|ref|ZP_11213858.1| 50S ribosomal protein L4 [Streptomyces somaliensis DSM 40738]
Length = 220
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 117/215 (54%), Gaps = 19/215 (8%)
Query: 52 SPLPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGE 106
S + ILS G+K G L D K++ P ++H+ ++ + R+GT T TRGE
Sbjct: 2 STIDILSPAGDKAGTVELPAEIFDAKTSVP-----LIHQVVVAQLAAARQGTHKTKTRGE 56
Query: 107 VRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIAS 166
VRGGG+KPY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ A++
Sbjct: 57 VRGGGKKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSD 116
Query: 167 AAAAENTIVVEE-FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNI 224
A VV +G+ K +G ++K LV+E S E S+RN+
Sbjct: 117 RARHSRVHVVTGVVEGEISTKAAKTL------FGKISERKNLLLVVERSDEAAWLSARNL 170
Query: 225 GTLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNG 258
+ +L P LN +D+L ++ +V T + + F++G
Sbjct: 171 PQVHILEPGQLNTYDVLVSDDVVFTKAAFESFVSG 205
>gi|256618379|ref|ZP_05475225.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 4200]
gi|256597906|gb|EEU17082.1| 50S ribosomal protein L4 [Enterococcus faecalis ATCC 4200]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 61 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKT 120
G + GE L+ + + +VV+ A+I + +GT + R VRGGGRKP+ QK T
Sbjct: 11 GTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLGQGTHAVKNRSAVRGGGRKPWRQKGT 70
Query: 121 GRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFD 180
GRAR+GS R+P GGGVVFGP PR +S K+ KK +RLA+ + ++ A N + VE
Sbjct: 71 GRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSDKVAENNLVAVEGLS 130
Query: 181 GKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLFD 239
F+ PKTKEF + + +D K +V+E + S+RN+ + ++T +++ D
Sbjct: 131 --FDAPKTKEFKQVLANLSIDTK---VLVVLENGNDFAALSARNLPNVSVVTSDNVSVLD 185
Query: 240 ILDAETLVLTPSTV 253
++ A ++ T + +
Sbjct: 186 VVSANKVLATQTAL 199
>gi|217967370|ref|YP_002352876.1| 50S ribosomal protein L4 [Dictyoglomus turgidum DSM 6724]
gi|217336469|gb|ACK42262.1| ribosomal protein L4/L1e [Dictyoglomus turgidum DSM 6724]
Length = 209
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 3/203 (1%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
+P+ + EK+GE L + + + + ++ + N R+GT ST R EV GRK
Sbjct: 4 VPVYNQKAEKVGEIELKEELFGVERRPDLFYTCVVMHLANGRQGTHSTKRRSEVNRSGRK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
+ QK TG AR+G + GGG FGPKPRD+S KI KK +RLAI +A+++ N
Sbjct: 64 VWPQKGTGHARQGDRKATHWVGGGRPFGPKPRDYSYKIPKKMRRLAIRSALSTKLKENNL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
I++++ + +PKTKE + + +GL K V EN++K++ N+ +K +
Sbjct: 124 IILDKIE--LPQPKTKELVNILNNFGL-ADSKVLIGVPTKDENLKKAAMNLERVKTMIAS 180
Query: 234 TLNLFDILDAETLVLTPSTVDFL 256
LN++D+L + L+LT + L
Sbjct: 181 VLNVYDLLKYDYLILTVDAIPVL 203
>gi|414159413|ref|ZP_11415699.1| 50S ribosomal protein L4 [Staphylococcus simulans ACS-120-V-Sch1]
gi|410884415|gb|EKS32241.1| 50S ribosomal protein L4 [Staphylococcus simulans ACS-120-V-Sch1]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L A + + V+ A+ + R+GT S R VRGGGRKP+
Sbjct: 6 VLKVDGSKAGSVELSDAVFAIEPNKDVLFEAINLQRASLRQGTHSVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGG+VFGP PR ++ K+ KK +RLA+ +A++ +
Sbjct: 66 RQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENEFKI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
++ F E PKTKEF + + L PK+ LV+ SE NVE S+RNI +++ T
Sbjct: 126 IDAFG--LEAPKTKEFTKVLSNLEL-PKK---VLVVTESEDVNVELSARNIPGVQITTVT 179
Query: 234 TLNLFDILDAETLVLT 249
LN+ DI A+++++T
Sbjct: 180 GLNVLDITSADSVLIT 195
>gi|418617841|ref|ZP_13180730.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU120]
gi|374817725|gb|EHR81903.1| 50S ribosomal protein L4 [Staphylococcus epidermidis VCU120]
Length = 207
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 56 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPY 115
+L G K G L+ A + +V+ A+ + R+GT + R VRGGGRKP+
Sbjct: 6 VLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGRKPW 65
Query: 116 SQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIV 175
QK TGRAR+G+ R P GGVVFGP PR ++ K+ KK +RLA+ +A++ + +
Sbjct: 66 RQKGTGRARQGTIRAPQWRSGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENSFTI 125
Query: 176 VEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE--NVEKSSRNIGTLKMLTPR 233
V+ F FE PKTKEF + +Q LV+ SE NVE S+RNI +++ T +
Sbjct: 126 VDTFG--FEAPKTKEFKNVLTTL----EQPKKVLVVTESEDVNVELSARNIPGVQVTTAQ 179
Query: 234 TLNLFDILDAETLVLT 249
LN+ D+ A+++++T
Sbjct: 180 GLNVLDLTSADSVIIT 195
>gi|387792156|ref|YP_006257221.1| 50S ribosomal protein L4 [Solitalea canadensis DSM 3403]
gi|379654989|gb|AFD08045.1| 50S ribosomal protein L4, bacterial/organelle [Solitalea canadensis
DSM 3403]
Length = 209
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
+ N+R+GT + R E+ G RK + QK TG +R+GS + PL GGG +FGP+PRD+S K
Sbjct: 41 LANQRQGTHKSKQRNEISGSTRKLHKQKGTGGSRKGSIKNPLFRGGGRIFGPQPRDYSFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A+ A N +V+E+F F+ PKTK + + GL T LV
Sbjct: 101 LNKKLKSLARQSALTYKAIESNIVVLEDFS--FDTPKTKNYSSLVS--GLKLANTKTLLV 156
Query: 211 M-EVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+ + ++NV SSRN+ K++T L+ + +L+A L+LT S+V
Sbjct: 157 IADANKNVYLSSRNLPKAKVITASELSTYALLNASKLLLTTSSV 200
>gi|161506874|ref|YP_001576828.1| 50S ribosomal protein L4 [Lactobacillus helveticus DPC 4571]
gi|172048368|sp|A8YXK6.1|RL4_LACH4 RecName: Full=50S ribosomal protein L4
gi|160347863|gb|ABX26537.1| 50S ribosomal protein L4 [Lactobacillus helveticus DPC 4571]
Length = 205
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 6/200 (3%)
Query: 54 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRK 113
L ++ G+ GE L+ K + +VV +I KR+GT+ R VRGGG+K
Sbjct: 4 LKVMDQNGKDSGEVTLNDKVFGIEPNESVVFETIIRQRAGKRQGTSKVKNRSAVRGGGKK 63
Query: 114 PYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENT 173
P+ QK TGRAR+GS R+P GGG VFGP PR ++ + +K++RLAI + ++ ++
Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYTMPRKQRRLAIKSVLSQKMIDKDL 123
Query: 174 IVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPR 233
IV+++ PKTK+ + + +D K L++ NV+ S+RN+ +K +
Sbjct: 124 IVLDKL--AMSAPKTKDLVSMLNSLNVDGK----VLIVSDDNNVQLSARNLAKVKAVPVN 177
Query: 234 TLNLFDILDAETLVLTPSTV 253
LN+ D ++ L+LT V
Sbjct: 178 GLNVEDAVNYGKLILTQDAV 197
>gi|46579715|ref|YP_010523.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602808|ref|YP_967208.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris DP4]
gi|387153062|ref|YP_005701998.1| 50S ribosomal protein L4 [Desulfovibrio vulgaris RCH1]
gi|81566853|sp|Q72CH9.1|RL4_DESVH RecName: Full=50S ribosomal protein L4
gi|166234662|sp|A1VEB5.1|RL4_DESVV RecName: Full=50S ribosomal protein L4
gi|46449130|gb|AAS95782.1| ribosomal protein L4 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563037|gb|ABM28781.1| LSU ribosomal protein L4P [Desulfovibrio vulgaris DP4]
gi|311233506|gb|ADP86360.1| ribosomal protein L4/L1e [Desulfovibrio vulgaris RCH1]
Length = 206
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 82 VVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFG 141
++H + R GT +T TR V GGG KP+ QK TGRAR GS R+PL GG ++FG
Sbjct: 32 ILHLVVRAQRAAFRAGTHATKTRAFVSGGGLKPWRQKGTGRARAGSIRSPLWRGGAIIFG 91
Query: 142 PKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLD 201
P+PRD+ K+NKK ++LA+ A++S A N +VV+ F+ KTK F + GLD
Sbjct: 92 PQPRDYEFKVNKKVRKLALRMALSSRLAGSNLLVVKGFE--LPEVKTKLFAKIADTLGLD 149
Query: 202 PKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGR 259
KA + E + + S RNI + + TP L++++IL + LVL V + R
Sbjct: 150 ---KALIIAPEENTTLALSVRNIPGITIATPEQLSVYEILKHKQLVLVEGAVASVQDR 204
>gi|417781050|ref|ZP_12428806.1| 50S ribosomal protein L4 [Leptospira weilii str. 2006001853]
gi|410779021|gb|EKR63643.1| 50S ribosomal protein L4 [Leptospira weilii str. 2006001853]
Length = 211
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A ++ A+ + N R G +T TR EVRGGG+KP+SQK TGRAR+GS R P GGG V
Sbjct: 30 ASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGTGRARQGSTRAPHWVGGGTVH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP+ RD+S K++ K K A+ + + A A V+E+ D K TK F + L
Sbjct: 90 GPQKRDYSYKVSSKLKHRAVLSILNKKAQAFAVKVIEDLDPK--EYSTKSFDSLFKNMNL 147
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
FLV S+ V+KS RNI T+K + + ++ DIL LV+T + + + +Y
Sbjct: 148 RNTGVIGFLVQGESDFVKKSVRNIPTVKYINSKRISCRDILYNRNLVITEAALKEMLTQY 207
Query: 261 GVE 263
G +
Sbjct: 208 GAQ 210
>gi|357401169|ref|YP_004913094.1| 50S ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386357232|ref|YP_006055478.1| 50S ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337767578|emb|CCB76289.1| ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807740|gb|AEW95956.1| 50S ribosomal protein L4 [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 216
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 115/223 (51%), Gaps = 19/223 (8%)
Query: 52 SPLPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGE 106
S + ILS G+K G L D K + P ++H+ ++ + R+GT T TRGE
Sbjct: 2 STIDILSPAGDKAGTVELPAEIFDAKVSVP-----LIHQVVVAQLAAARQGTHKTKTRGE 56
Query: 107 VRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIAS 166
VRGGG+KPY QK TGRAR+GS R P GGGVV GP PRD+S + KK + A+ A+
Sbjct: 57 VRGGGKKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMIKAALRGALTD 116
Query: 167 AAAAENTIVVEEFDGKFE--RPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVE-KSSRN 223
A + VV G E P TK A G +K LV+E ++ V S+RN
Sbjct: 117 RARHDRVHVVT---GVVEGSAPSTK---SAKALLGKISDRKNVLLVVERADEVAWLSARN 170
Query: 224 IGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGVEFEG 266
+ + +L LN +D+L ++ +V T D G E EG
Sbjct: 171 LPQVHILEAGQLNAYDVLVSDDVVFTKDAFDRFTGAGAAESEG 213
>gi|116327225|ref|YP_796945.1| 50S ribosomal protein L4 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116327265|ref|YP_796985.1| 50S ribosomal protein L4 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116332121|ref|YP_801839.1| 50S ribosomal protein L4 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122280149|sp|Q04PT9.1|RL4_LEPBJ RecName: Full=50S ribosomal protein L4
gi|116119969|gb|ABJ78012.1| 50S Ribosomal protein L4 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116120009|gb|ABJ78052.1| 50S Ribosomal protein L4 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116125810|gb|ABJ77081.1| 50S Ribosomal protein L4 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 211
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 2/181 (1%)
Query: 81 AVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVF 140
A ++ A+ + N R G +T TR EVRGGG+KP+SQK TG AR+GS R P GGG V
Sbjct: 30 ASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGTGHARQGSTRAPHWVGGGTVH 89
Query: 141 GPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGL 200
GP+ RD+S K++ K K A+ + + A A V+E+ D K TK F + L
Sbjct: 90 GPQKRDYSYKVSSKLKHKAVLSILNKKAQASAVKVIEDLDPK--EYSTKSFDSIFKNMNL 147
Query: 201 DPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRY 260
FLV S+ V+KS RNI T+K + + ++ DIL LV+T + ++ + +Y
Sbjct: 148 RNTGVIGFLVQGESDFVKKSVRNIPTVKYINSKRISCRDILYNRNLVITEAALNEMLTQY 207
Query: 261 G 261
G
Sbjct: 208 G 208
>gi|225011648|ref|ZP_03702086.1| ribosomal protein L4/L1e [Flavobacteria bacterium MS024-2A]
gi|225004151|gb|EEG42123.1| ribosomal protein L4/L1e [Flavobacteria bacterium MS024-2A]
Length = 209
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 54 LPILSFTGEKIG-ETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGR 112
L +L+ G++ G + LD + ++ + + NKR+GT R E+ G R
Sbjct: 3 LNVLNIEGKETGRKIKLDKAVFGIEPNDHAIYLDVKQHLANKRQGTHKAKERAEIVGSTR 62
Query: 113 KPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAEN 172
K QK TG AR GS + PL GGG VFGP+PRD+S K+NKK KRLA +A++ A ++
Sbjct: 63 KIKKQKGTGTARAGSIKNPLFKGGGRVFGPRPRDYSQKVNKKVKRLARMSALSIKANQKS 122
Query: 173 TIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTP 232
+V+E+F + ++P+TK +++ + GL K K+ ++ E+++NV SSRN+ K++
Sbjct: 123 IVVLEDF--QMDQPQTKNYLKMLAALGLADK-KSILVLGELNKNVYLSSRNLKNSKVVIN 179
Query: 233 RTLNLFDILDAETLVLTPSTV 253
LN + I +A +L+ + +
Sbjct: 180 SELNTYSISNANSLIFSEGAI 200
>gi|345008571|ref|YP_004810925.1| 50S ribosomal protein L4 [Streptomyces violaceusniger Tu 4113]
gi|344034920|gb|AEM80645.1| ribosomal protein L4/L1e [Streptomyces violaceusniger Tu 4113]
Length = 217
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 112/210 (53%), Gaps = 9/210 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + ILS G+K G L + + ++H+ ++ + R+GT T TRGEVRGGG
Sbjct: 2 STIDILSPAGDKAGTVELPAEIFDTQVSIPLIHQVVVAQLAAARQGTHKTKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KPY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ A++ A E
Sbjct: 62 KKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRARHE 121
Query: 172 NTIVVEE-FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNIGTLKM 229
VV DG K + G ++K LV E S E S+RN+ + +
Sbjct: 122 RIHVVTGVVDGDISTKAAKTLL------GKISERKNLLLVAERSDEAAWLSARNLPQVHI 175
Query: 230 LTPRTLNLFDILDAETLVLTPSTVD-FLNG 258
L P LN +D+L ++ +V T + + F+ G
Sbjct: 176 LEPGQLNTYDVLVSDDVVFTKAAFESFVAG 205
>gi|408680098|ref|YP_006879925.1| LSU ribosomal protein L4p [Streptomyces venezuelae ATCC 10712]
gi|328884427|emb|CCA57666.1| LSU ribosomal protein L4p [Streptomyces venezuelae ATCC 10712]
Length = 216
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 9/218 (4%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + ILS G+K G L + + ++H+ ++ + R+GT T TRGEVRGGG
Sbjct: 2 STIDILSPAGDKTGTVELPEEIFGAKVSVPLIHQVVVAQLAAARQGTHKTKTRGEVRGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAE 171
+KPY QK TGRAR+GS R P GGGVV GP PRD+S + KK K A+ A++ A
Sbjct: 62 KKPYRQKGTGRARQGSTRAPQFAGGGVVHGPVPRDYSQRTPKKMKVAALRGALSDRATHS 121
Query: 172 NTIVVEE-FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNIGTLKM 229
VV +G+ K +G ++K LV E S E S+RN+ + +
Sbjct: 122 RIHVVTGVVEGEISTKAAKTL------FGKISERKNLLLVAERSDEAAWLSARNLPQVHI 175
Query: 230 LTPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEG 266
L P LN +D++ ++ +V T + ++ F++G E EG
Sbjct: 176 LEPGQLNTYDVIVSDDVVFTKAALESFVSGPQTAETEG 213
>gi|387785033|ref|YP_006071116.1| 50S ribosomal protein L4 [Streptococcus salivarius JIM8777]
gi|338745915|emb|CCB96281.1| 50S ribosomal protein L4 [Streptococcus salivarius JIM8777]
Length = 207
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG+++ L+ + +VV +I+ + R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEVSTVELNDAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+ +K +RLA+ + ++ A + + VE
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
F PKT EF + +D K +V E ++ E S+RN+ + + TP T ++ D
Sbjct: 130 S--FAAPKTVEFANVLSALSID--SKVLVIVEEGNKFAELSARNLANVTVATPATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++A+ L++T +
Sbjct: 186 IVNADKLLVTKEAI 199
>gi|315605900|ref|ZP_07880931.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312182|gb|EFU60268.1| 50S ribosomal protein L4 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 216
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 120/209 (57%), Gaps = 15/209 (7%)
Query: 56 ILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGG 110
++ TG+K+G L D+ + P ++H+ ++ + R+GT +T TRG+V GG
Sbjct: 11 VIDLTGKKVGSVSLPGSIFDVPTNIP-----LMHQVVVAQLAAARQGTHATKTRGQVAGG 65
Query: 111 GRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAA 170
G+KP+ QK TG AR+GS R P GGG+V GP+PRD+ + KK K+ A+ +A++ A A
Sbjct: 66 GKKPFRQKGTGNARQGSIRAPHFTGGGIVHGPQPRDYDQRTPKKMKQGALRSALSDRARA 125
Query: 171 ENTIVVEE-FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKM 229
+ VV F+G E+P TK + A+R + ++A ++ +E S RN+ + +
Sbjct: 126 DRIHVVTALFEG--EKPSTKAALAALR--AIVEDRQALVVLERGNELTALSLRNVPEVHV 181
Query: 230 LTPRTLNLFDILDAETLVLTPSTVDFLNG 258
L LN +D+LDA+ +V T + ++ G
Sbjct: 182 LWADQLNTYDVLDADDIVFTQAALESFLG 210
>gi|401765908|ref|YP_006580914.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401766676|ref|YP_006581681.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|401767431|ref|YP_006582435.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768203|ref|YP_006583206.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
NY01_2001.047-5-1P]
gi|401768964|ref|YP_006583966.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
WI01_2001.043-13-2P]
gi|401769711|ref|YP_006584712.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
NC06_2006.080-5-2P]
gi|401770456|ref|YP_006585456.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
CA06_2006.052-5-2P]
gi|401771220|ref|YP_006586219.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
NC08_2008.031-4-3P]
gi|400272227|gb|AFP75690.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|400272995|gb|AFP76457.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|400273750|gb|AFP77211.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|400274522|gb|AFP77982.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
NY01_2001.047-5-1P]
gi|400275283|gb|AFP78742.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
WI01_2001.043-13-2P]
gi|400276030|gb|AFP79488.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
NC06_2006.080-5-2P]
gi|400276775|gb|AFP80232.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
CA06_2006.052-5-2P]
gi|400277539|gb|AFP80995.1| 50S ribosomal protein L4 [Mycoplasma gallisepticum
NC08_2008.031-4-3P]
Length = 209
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 14/209 (6%)
Query: 52 SPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGG 111
S + + +G+ E L+ K + + + A++ + ++ +GT STL +GEV GGG
Sbjct: 2 SKIKLFDLSGKVQEEIELNQKLLVSEVHKQAIFDAILAENLSQIQGTHSTLKKGEVSGGG 61
Query: 112 RKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAAAA 170
+KPY QK TGRAR+GS R P GGG+ FGPKP R++ IK+NKK LA +AI S
Sbjct: 62 KKPYQQKHTGRARQGSIRNPHYVGGGIAFGPKPNRNYKIKVNKKVSSLAFKSAITSKVNN 121
Query: 171 ENTIVVEEFDG-----KFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIG 225
EF G K ++P TK + ++ L +K + E +EN+EKSS N+
Sbjct: 122 ------NEFLGLVDSIKQDKPSTKAIAKLLKE--LKVNKKVLIVAFEKNENLEKSSANLP 173
Query: 226 TLKMLTPRTLNLFDILDAETLVLTPSTVD 254
+ +++ D++DA ++ S ++
Sbjct: 174 NVSYKLWNQVSVKDLIDANCVLAQKSAIN 202
>gi|312862390|ref|ZP_07722633.1| 50S ribosomal protein L4 [Streptococcus vestibularis F0396]
gi|311102033|gb|EFQ60233.1| 50S ribosomal protein L4 [Streptococcus vestibularis F0396]
Length = 207
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG+++ L+ + +VV +I+ + R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKEVSTVELNDAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGGVVFGP PR + K+ +K +RLA+ + ++ A + + VE
Sbjct: 70 TGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVEAL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
F PKT EF + +D K +V E ++ E S+RN+ + + TP T ++ D
Sbjct: 130 S--FVAPKTAEFANVLSALSID--SKVLVIVEEGNKFAELSARNLANVTVATPATASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I++A+ L++T +
Sbjct: 186 IVNADKLLVTKEAI 199
>gi|224023619|ref|ZP_03641985.1| hypothetical protein BACCOPRO_00326 [Bacteroides coprophilus DSM
18228]
gi|224016841|gb|EEF74853.1| hypothetical protein BACCOPRO_00326 [Bacteroides coprophilus DSM
18228]
Length = 209
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 91 MQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIK 150
M ++R+GT + R E+ G RK QK G ARRG +PL GG VFGPKPRD+ K
Sbjct: 41 MASQRQGTHKSKERSEISGSTRKLGRQKGGGGARRGDINSPLLVGGARVFGPKPRDYWFK 100
Query: 151 INKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLV 210
+NKK K LA +A++ A A N +VVE+F FE PKTK+F+ + + K K ++
Sbjct: 101 LNKKVKALARKSALSYKAQANNIVVVEDFT--FEAPKTKDFVNVVNNLKVSGK-KLLMVL 157
Query: 211 MEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTV 253
+NV S+RN+ ++ LN + +LDAETLV+T S +
Sbjct: 158 SGADKNVYLSARNLERTNVMVASALNTYKVLDAETLVVTESAL 200
>gi|398784931|ref|ZP_10548052.1| 50S ribosomal protein L4 [Streptomyces auratus AGR0001]
gi|396994821|gb|EJJ05848.1| 50S ribosomal protein L4 [Streptomyces auratus AGR0001]
Length = 216
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 117/223 (52%), Gaps = 19/223 (8%)
Query: 52 SPLPILSFTGEKIGETYL-----DLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGE 106
S + ILS G+K G L D K + P ++H+ ++ + R+GT T TRGE
Sbjct: 2 STIDILSPAGDKAGTVELPTEIFDAKVSIP-----LIHQVVVAQLAAARQGTHKTKTRGE 56
Query: 107 VRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIAS 166
VRGGG+KPY QK TGRAR+GS R P GGG+V GP PRD+S + KK K A+ A+
Sbjct: 57 VRGGGKKPYRQKGTGRARQGSTRAPQFAGGGIVHGPVPRDYSQRTPKKMKAAALRGALTD 116
Query: 167 AAAAENTIVVEE-FDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS-ENVEKSSRNI 224
A VV +G K + G ++K LV+E S E S+RN+
Sbjct: 117 RARNSRIHVVSGVVEGDISTKAAKTLL------GKVSERKNVLLVVERSDEAAWLSARNL 170
Query: 225 GTLKMLTPRTLNLFDILDAETLVLTPSTVD-FLNGRYGVEFEG 266
+ +L P LN +D+L ++ +V T + + F++G E EG
Sbjct: 171 PQVHILEPGQLNTYDVLVSDDVVFTKAAFESFVSGPKAAETEG 213
>gi|417917014|ref|ZP_12560577.1| 50S ribosomal protein L4 [Streptococcus parasanguinis SK236]
gi|342831178|gb|EGU65500.1| 50S ribosomal protein L4 [Streptococcus parasanguinis SK236]
Length = 207
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
TG++ GE L+ + +AVV +I+ + R+GT + R V GGGRKP+ QK
Sbjct: 10 TGKQAGEVVLNDAIFGIEPNQAVVFDVIISQRASLRQGTHAVKNRSAVSGGGRKPWRQKG 69
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR+GS R+P GGG+VFGP PR+++ K+ +K +RLA+ + + A + V+
Sbjct: 70 TGRARQGSIRSPQWRGGGIVFGPTPRNYAYKLPQKVRRLALKSVYSEKVAENKFVAVDSL 129
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFD 239
+ F PKT EF + + +D K ++ E +E S+RN+ +K+ T T ++ D
Sbjct: 130 E--FTAPKTAEFAKVLAALSID--SKVLVILEEGNEFAALSARNLPNVKVATATTASVLD 185
Query: 240 ILDAETLVLTPSTV 253
I +++ L++T + +
Sbjct: 186 IANSDKLLVTQAAI 199
>gi|397670938|ref|YP_006512473.1| 50S ribosomal protein L4 [Propionibacterium propionicum F0230a]
gi|395141018|gb|AFN45125.1| 50S ribosomal protein L4 [Propionibacterium propionicum F0230a]
Length = 235
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 13/227 (5%)
Query: 60 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKK 119
T E GE + D+++ P ++H+ ++ + R+GT ST TRGEVRGGG KP+ QK
Sbjct: 18 TAELPGEIF-DVQTNIP-----LIHQVVVAQLAAARQGTHSTKTRGEVRGGGSKPWRQKG 71
Query: 120 TGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEF 179
TGRAR GS R+P+ GGG V GPKPRD+S + KK A+ +++ A VV E
Sbjct: 72 TGRARHGSRRSPIWTGGGTVHGPKPRDYSQRTPKKMIVAALRGSLSDRARDGQVFVVSEL 131
Query: 180 DGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK-SSRNIGTLKMLTPRTLNLF 238
E P T+ +E + + G + K +V++ E V S RN+ T+ +L LN +
Sbjct: 132 VSG-EVPSTRTALETLEQLG---ELKKVLVVLDRFEEVAWLSLRNVPTIHVLAVDQLNAY 187
Query: 239 DILDAETLVLTPSTVDFLN--GRYGVEFEGDGDEEEEESEAREAGEE 283
D+L A+++V T + + G V E + E +EA E EE
Sbjct: 188 DVLVADSVVFTSAALAAFTHRGAEAVASESEATEPAGSAEALENEEE 234
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,355,771,154
Number of Sequences: 23463169
Number of extensions: 185663606
Number of successful extensions: 734791
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3274
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 728244
Number of HSP's gapped (non-prelim): 3535
length of query: 288
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 147
effective length of database: 9,050,888,538
effective search space: 1330480615086
effective search space used: 1330480615086
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)