Query 023032
Match_columns 288
No_of_seqs 170 out of 1221
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 15:11:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023032.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023032hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gycc1 c.22.1.1 (C:1-198) Rib 100.0 7.9E-72 5.8E-76 494.4 5.0 197 53-258 2-198 (198)
2 d1dmga_ c.22.1.1 (A:) Ribosoma 100.0 1.5E-69 1.1E-73 487.1 14.2 206 53-261 2-225 (225)
3 d2zjrc1 c.22.1.1 (C:2-198) Rib 100.0 3.6E-70 2.6E-74 483.2 9.6 196 53-258 2-197 (197)
4 d2j01f1 c.22.1.1 (F:1-208) Rib 100.0 4.7E-68 3.4E-72 472.8 18.7 204 49-262 5-208 (208)
5 d1vqoc1 c.22.1.1 (C:1-246) Rib 100.0 1.6E-59 1.2E-63 427.1 11.0 204 53-259 2-246 (246)
6 d1vqoc1 c.22.1.1 (C:1-246) Rib 86.5 0.13 9.4E-06 44.2 2.1 89 74-162 26-117 (246)
7 d1oxxk2 c.37.1.12 (K:1-242) Gl 52.0 3.8 0.00027 34.6 2.8 57 156-215 147-203 (242)
8 d1v43a3 c.37.1.12 (A:7-245) Hy 48.0 3.5 0.00026 34.7 1.9 62 156-220 143-204 (239)
9 g1f2t.1 c.37.1.12 (A:,B:) Rad5 45.2 23 0.0017 27.7 6.7 42 158-199 212-254 (292)
10 d1ji0a_ c.37.1.12 (A:) Branche 44.8 6.5 0.00047 32.7 3.1 58 156-217 146-203 (240)
11 d1g2912 c.37.1.12 (1:1-240) Ma 41.7 6.1 0.00044 33.1 2.5 57 156-215 146-202 (240)
12 d1b0ua_ c.37.1.12 (A:) ATP-bin 40.0 8.7 0.00064 32.3 3.2 59 155-217 155-213 (258)
13 d3dhwc1 c.37.1.12 (C:1-240) Me 39.8 5.2 0.00038 33.6 1.7 58 155-215 146-203 (240)
14 d2awna2 c.37.1.12 (A:4-235) Ma 39.5 5.1 0.00037 33.5 1.6 59 157-218 138-196 (232)
15 d1jj7a_ c.37.1.12 (A:) Peptide 39.1 13 0.00094 30.9 4.2 55 155-212 157-211 (251)
16 d2hyda1 c.37.1.12 (A:324-578) 38.3 24 0.0018 29.3 5.9 52 156-212 161-212 (255)
17 d3b60a1 c.37.1.12 (A:329-581) 37.0 18 0.0013 30.1 4.7 52 156-212 159-210 (253)
18 d1l2ta_ c.37.1.12 (A:) MJ0796 34.6 12 0.00085 31.0 3.1 54 156-212 152-205 (230)
19 d3d31a2 c.37.1.12 (A:1-229) Su 33.9 7.8 0.00057 32.2 1.9 62 155-219 133-194 (229)
20 d2onka1 c.37.1.12 (A:1-240) Mo 33.7 7.5 0.00054 32.6 1.7 59 156-217 133-191 (240)
21 d1vpla_ c.37.1.12 (A:) Putativ 30.6 11 0.00077 31.3 2.2 56 155-214 139-194 (238)
22 d1l7vc_ c.37.1.12 (C:) ABC tra 30.4 16 0.0012 29.7 3.3 58 156-214 132-193 (231)
23 d1g6ha_ c.37.1.12 (A:) MJ1267 30.1 17 0.0012 30.1 3.4 65 149-217 149-214 (254)
24 d1mv5a_ c.37.1.12 (A:) Multidr 28.6 24 0.0018 28.9 4.2 53 155-212 145-197 (242)
25 d2pmka1 c.37.1.12 (A:467-707) 27.7 28 0.002 28.6 4.4 53 155-212 145-197 (241)
26 d1blea_ c.38.1.1 (A:) Fructose 22.9 1.2E+02 0.0089 23.1 7.3 98 162-261 19-135 (161)
27 g1ii8.1 c.37.1.12 (A:,B:) Rad5 22.5 98 0.0071 23.8 6.8 67 155-224 286-353 (369)
28 d1l1qa_ c.61.1.1 (A:) Adenine 21.3 30 0.0022 27.2 3.2 29 170-201 116-145 (181)
No 1
>d2gycc1 c.22.1.1 (C:1-198) Ribosomal protein L4 {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.9e-72 Score=494.40 Aligned_cols=197 Identities=29% Similarity=0.477 Sum_probs=189.9
Q ss_pred CceeeccCCCeEeEEEcCCCCCCCCchHHHHHHHHHHHHhhCCCCcccccccceecCCCCCCcccCCCCccccCCCCCCC
Q 023032 53 PLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPL 132 (288)
Q Consensus 53 ~v~V~~~~G~~~g~ieL~~~vF~~~~~~dllh~~v~~~~a~~RqGTa~TKtR~EV~GsgRKP~~QKGTGRAR~Gs~rsP~ 132 (288)
++.|.|.. |+++|++.+|+.+++.+|||++|+||++|+|||||+||||+||+|||||||+||||||||+||+|||+
T Consensus 2 ~l~~~~~~----~~i~l~~~vF~~~~~~~llh~~v~~~~a~~R~gt~~tKtRseV~g~gkKp~~QKGTGrAR~Gs~rsP~ 77 (198)
T d2gycc1 2 ELVLKDAQ----SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPI 77 (198)
T ss_dssp CEEEECTT----CCSCCCEECCCSCCCHHHHTTTSSSCTTCCSCCCCSSCSCCCCCCSCSSCSCCCCCCCBTTBCCSCSS
T ss_pred eeEecCCC----CeEEeCHHHhCCCcCHHHHHHHHHHHHHhccCCCcccceehhccCCccCcccccCCCCCCCcCcchhh
Confidence 67888866 46999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCccccccCHHHHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 133 RPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 133 ~rGGGvafGPkPRd~~~klNkK~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
|||||+||||+||+|+++||||+|++|+++|||.|+++++++|||++. ++.||||++.++|+++++. ++|||+++
T Consensus 78 ~~gGGva~GP~pr~~~~kl~kK~r~~al~~aLs~k~~~~~l~vvd~~~--~~~~kTk~~~~~l~~~~~~---~~Liv~~~ 152 (198)
T d2gycc1 78 WRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS--VEAPKTKLLAQKLKDMALE---DVLIITGE 152 (198)
T ss_dssp SSSCCCSSCSCCSSSCCCCCTTTHHHHHHHHHHHTTSSSSCCEECGGG--GTCCSSHHHHHHHHTTTCG---GGTTTCCC
T ss_pred cccCceecCccccCeEeeHHHHHHHHHHHHHHHHHHhcCCeEEEeecc--ccCCcHHHHHHHHhhhccc---eeEEecCc
Confidence 999999999999999999999999999999999999999999999985 7889999999999999884 68999999
Q ss_pred cchhHHHhhhcCCCceeecCCCcchhhhcCCCcEEEcHHHHHHHHH
Q 023032 213 VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258 (288)
Q Consensus 213 ~~~nl~~s~RNIp~V~v~~~~~Lnv~dLL~~~~lViT~~Al~~L~e 258 (288)
.++|+++|+||||+|+++++++|||||||+++.||||++||+.|||
T Consensus 153 ~~enl~~S~RNI~~v~v~~~~~lNvydlLk~~~lVit~~Al~~leE 198 (198)
T d2gycc1 153 LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 (198)
T ss_dssp CSSSCCGGGSSSSSCCCCCSSSCCHHHHTTTSCCCEEHHHHHHHHC
T ss_pred ccHHHHHHHhCcCCceEeecCCccHHHHhcCCeEEEEHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999985
No 2
>d1dmga_ c.22.1.1 (A:) Ribosomal protein L4 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=1.5e-69 Score=487.11 Aligned_cols=206 Identities=41% Similarity=0.624 Sum_probs=142.1
Q ss_pred CceeeccCCCeEeEEEcCCCCCCCCchHHHHHHHHHHHHhhCCCCcccccccceecCCCCCCcccCCCCccccCCCCCCC
Q 023032 53 PLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPL 132 (288)
Q Consensus 53 ~v~V~~~~G~~~g~ieL~~~vF~~~~~~dllh~~v~~~~a~~RqGTa~TKtR~EV~GsgRKP~~QKGTGRAR~Gs~rsP~ 132 (288)
+|+|||++|+++|+++||+.+|+.++|+||||++|+||++++|||||+||+|+||+|+|||||+||||||||+|++++|+
T Consensus 2 ~v~v~~~~g~~~g~i~L~~~vF~~~~r~dli~~~v~~~~~~~Rqgt~~tk~rsev~g~gkK~~~QKGtG~AR~Gs~~sp~ 81 (225)
T d1dmga_ 2 QVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPWPQKHTGRARHGSIRSPI 81 (225)
T ss_dssp EEEEECTTSCEEEEEECCHHHHSSCCCHHHHHHHHHHHHC----------------------------------------
T ss_pred eeEEEcCCCCEeeEEEeCHHHhCCCccHHHHHHHHHHHHHhcccCccccccceeeecccccccccCCcCcccccccccce
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCccccccCHHHHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 133 RPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 133 ~rGGGvafGPkPRd~~~klNkK~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
|||||++|||+||||+++||||+|++|+++|||+++++++++|||++. ++.||||++.++|+++|+. +.++|||+.+
T Consensus 82 ~~gGg~a~gp~pr~~~~klnkK~r~~Al~~aLs~k~~~~~l~VVd~~~--~~~~KTK~~~~~l~~l~~~-~~~~llv~~~ 158 (225)
T d1dmga_ 82 WRHGGVVHGPKPRDWSKKLNKKMKKLALRSALSVKYRENKLLVLDDLK--LERPKTKSLKEILQNLQLS-DKKTLIVLPW 158 (225)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCC--CSSCCHHHHHHHHHHTTCT-TSCEEEEECC
T ss_pred eeccccccCCCCchhhhhHHHHHHHHHHHHHHHHHhccCCeEEecccc--ccccchHHHHHHHhhhccc-ccceeeeecc
Confidence 999999999999999999999999999999999999999999999985 7889999999999999996 3467888754
Q ss_pred c---chhHHHhhhcCCCceeecC---------------CCcchhhhcCCCcEEEcHHHHHHHHHhhC
Q 023032 213 V---SENVEKSSRNIGTLKMLTP---------------RTLNLFDILDAETLVLTPSTVDFLNGRYG 261 (288)
Q Consensus 213 ~---~~nl~~s~RNIp~V~v~~~---------------~~Lnv~dLL~~~~lViT~~Al~~L~e~~~ 261 (288)
. +.|+++|+||||+|+++.+ .+|||||||++++||||++||+.|||+||
T Consensus 159 ~~e~~~n~~~s~rNlp~v~v~~~~~~~~~~~~~~~~~~~~lNvydlL~~~~lVit~~Al~~lee~Lg 225 (225)
T d1dmga_ 159 KEEGYMNVKLSGRNLPDVKVIIADNPNNSKNGEKAVRIDGLNVFDMLKYDYLVLTRDMVSKIEEVLG 225 (225)
T ss_dssp CSHHHHHHHHHHTTCTTEEEEECCCCSSCCSSCCCCCCTTCCHHHHHHSSEEEEEHHHHHHHHHHHC
T ss_pred ccchhHHHHHHHcCCCCceEeeccccccccccccccccCCccHHHHhcCCeEEEeHHHHHHHHHHcC
Confidence 3 3589999999999999865 45999999999999999999999999997
No 3
>d2zjrc1 c.22.1.1 (C:2-198) Ribosomal protein L4 {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00 E-value=3.6e-70 Score=483.15 Aligned_cols=196 Identities=33% Similarity=0.569 Sum_probs=183.1
Q ss_pred CceeeccCCCeEeEEEcCCCCCCCCchHHHHHHHHHHHHhhCCCCcccccccceecCCCCCCcccCCCCccccCCCCCCC
Q 023032 53 PLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPL 132 (288)
Q Consensus 53 ~v~V~~~~G~~~g~ieL~~~vF~~~~~~dllh~~v~~~~a~~RqGTa~TKtR~EV~GsgRKP~~QKGTGRAR~Gs~rsP~ 132 (288)
+++|+|.+|+++++++|+ +++++|||++|+||++|+|||||+||||+||+|||||||+||||||||+||+|||+
T Consensus 2 ~~~v~~~~g~~~~~~~~~------e~~~~ll~~~v~~~~a~~R~gt~~tk~R~ev~gsgkKp~~QKGtGrAR~Gs~rsP~ 75 (197)
T d2zjrc1 2 QINVIGQNGGRTIELPLP------EVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPT 75 (197)
T ss_dssp CCCCSSCCCCCCCCCCTT------TCCHHHHHHHHHHHHHHHCCCCCCCCCCTTTSCCCSCCSCSSSSSSCCCSCSCSTT
T ss_pred eeeeecCCCCeEEeeccc------cccHHHHHHHHHHHHHhhhccCccCCchhhccCCCCCcccCCCCCCCCcccccccc
Confidence 689999999999888775 68999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCccccccCHHHHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 133 RPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 133 ~rGGGvafGPkPRd~~~klNkK~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
|||||+||||+||+|+++||||+|++||++|||.|+++++++|||++. ++.||||+++++|+++++.....+|++ +
T Consensus 76 ~rgGg~afgp~pr~~~~~lnkK~r~lal~~aLS~K~~~~~l~vvd~~~--~~~~KTK~~~~~l~~~~~~~~~~vl~~--~ 151 (197)
T d2zjrc1 76 FVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFD--IADAKTKNFISWAKQNGLDGTEKVLLV--T 151 (197)
T ss_dssp STTSCCTTCCCCCCCCCCCCHHHHHHHHHHHHHHHHHTTCCBCSCCTT--SCSSCSHHHHHHHHHTTCCSSSCEEEE--C
T ss_pred cccceeeccccccchhhhccHHHHHHHHHHHHHHHHhcCceEEecccc--cccCCcHHHHhHhhhhhcccccceeee--c
Confidence 999999999999999999999999999999999999999999999985 789999999999999998643323333 3
Q ss_pred cchhHHHhhhcCCCceeecCCCcchhhhcCCCcEEEcHHHHHHHHH
Q 023032 213 VSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNG 258 (288)
Q Consensus 213 ~~~nl~~s~RNIp~V~v~~~~~Lnv~dLL~~~~lViT~~Al~~L~e 258 (288)
.++|+++|+||||+|+++++++|||||||++++||||++||+.|||
T Consensus 152 ~~en~~~s~RNi~~v~v~~~~~lNvydlLk~~~lVit~~Al~~LEE 197 (197)
T d2zjrc1 152 DDENTRRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEIVEE 197 (197)
T ss_dssp CCHHHHTSCCCSSSEEEEGGGCCCHHHHHHSSEEECBCTTTSSCCC
T ss_pred cchHHHHHHhCcCCceEeecCCccHHHHhcCCcEEEEHHHHHHhhC
Confidence 4789999999999999999999999999999999999999998864
No 4
>d2j01f1 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=4.7e-68 Score=472.76 Aligned_cols=204 Identities=37% Similarity=0.559 Sum_probs=189.5
Q ss_pred ccCCCceeeccCCCeEeEEEcCCCCCCCCchHHHHHHHHHHHHhhCCCCcccccccceecCCCCCCcccCCCCccccCCC
Q 023032 49 QLASPLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSN 128 (288)
Q Consensus 49 ~~~~~v~V~~~~G~~~g~ieL~~~vF~~~~~~dllh~~v~~~~a~~RqGTa~TKtR~EV~GsgRKP~~QKGTGRAR~Gs~ 128 (288)
.|+ +++||+.+|++.++++|| .++|+||||++|+||++|+|||||+||+|+||+|||||||+||||||||+|++
T Consensus 5 ~~~-~~~v~~~~g~~~~~~~l~-----~~v~~dli~~av~~~~a~~Rqgta~tk~R~ev~g~gkK~~~QKGtGrAR~Gs~ 78 (208)
T d2j01f1 5 AVY-QIPVLSPSGRRELAADLP-----AEINPHLLWEVVRWQLAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDI 78 (208)
T ss_dssp CCC-CCCSSSCCCCCCCSTTSS-----SCCCHHHHHHHHHHHHHHTCCCCCCCCCTTTSCCCCCCSSCSSSSSSCCCCCT
T ss_pred eEE-eeeeecCCCCEeeccccc-----cccCHHHHHHHHHHHHHhccCCCCCCCccccccCcccccCccccccccccccc
Confidence 455 899999999999987776 47899999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccCCCCCccccccCHHHHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEE
Q 023032 129 RTPLRPGGGVVFGPKPRDWSIKINKKEKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATF 208 (288)
Q Consensus 129 rsP~~rGGGvafGPkPRd~~~klNkK~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~Li 208 (288)
|+|+|||||++|||+||+|+++||||+|++|+++|||+++++++++|||++. ++.||||+++++|+++|++... .++
T Consensus 79 rsp~~~gGg~~~gp~~r~~~~klnkK~r~~Al~~aLs~k~~~~~l~Vvd~~~--~~~~KTK~~~~~L~~l~l~~~~-~vl 155 (208)
T d2j01f1 79 GAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRAREGKLLLVEAFA--GVNGKTKEFLAWAKEAGLDGSE-SVL 155 (208)
T ss_dssp TSTTSTTSCCSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHTTCEEEECCCC--CCSSCHHHHHHHHHHHTCCSSS-CEE
T ss_pred ccccccccceecCcchhhHHHHHHHHHHHHHHHHHHHHHhccCCceeecccc--ccccccHHHHHHHHHhcccccc-cee
Confidence 9999999999999999999999999999999999999999999999999985 6889999999999999997433 333
Q ss_pred EEeccchhHHHhhhcCCCceeecCCCcchhhhcCCCcEEEcHHHHHHHHHhhCC
Q 023032 209 LVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLTPSTVDFLNGRYGV 262 (288)
Q Consensus 209 V~~~~~~nl~~s~RNIp~V~v~~~~~Lnv~dLL~~~~lViT~~Al~~L~e~~~~ 262 (288)
++. .|+|+++|+||||+|+++++++||+||||+++.||||++||++|+|+|++
T Consensus 156 ~v~-~~en~~~s~rNi~~v~v~~~~~lNv~dlL~~~~lvit~~Al~~L~erl~G 208 (208)
T d2j01f1 156 LVT-GNELVRRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAWEVFQNRIGG 208 (208)
T ss_dssp EEC-SCHHHHHHHTTCTTEEEECGGGCCHHHHHHSSEEEEEHHHHHHHHHTCC-
T ss_pred ecc-chhHHHHHHhCCCCCEEeecCCccHHHHhcCCcEEEEHHHHHHHHHHhCc
Confidence 333 36899999999999999999999999999999999999999999999974
No 5
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00 E-value=1.6e-59 Score=427.12 Aligned_cols=204 Identities=20% Similarity=0.252 Sum_probs=180.2
Q ss_pred CceeeccCCCeEeEEEcCCCCCCCCchHHHHHHHHHHHHhhCCCCccccccccee--cCCCCCCcccCCCCccccCCCCC
Q 023032 53 PLPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEV--RGGGRKPYSQKKTGRARRGSNRT 130 (288)
Q Consensus 53 ~v~V~~~~G~~~g~ieL~~~vF~~~~~~dllh~~v~~~~a~~RqGTa~TKtR~EV--~GsgRKP~~QKGTGRAR~Gs~rs 130 (288)
+++|||.+|+++|+++||+ +|+.++|.||||++|+||++|+|||||+|++|++. +++..+.|+||||||||+|++|+
T Consensus 2 k~~v~~~~gk~~g~i~lpd-vF~~~~r~dlvh~~v~~~~an~Rqgt~~~k~~g~~t~a~~~g~g~~qk~tgrar~g~rrs 80 (246)
T d1vqoc1 2 QATIYDLDGNTDGEVDLPD-VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRV 80 (246)
T ss_dssp EEEEECTTSCEEEEEECCG-GGGSCCCHHHHHHHHHHHHHHTCCCCCCCTTTTTCCCCBCCCSSSSCCCCCEETTEECSS
T ss_pred ceEEEcCCCCEeeEEEChh-hhCCCCCHHHHHHHHHHHHHhcccCcCCCchhheeeeeeecCccccccCCCccccCCccC
Confidence 7999999999999999985 99999999999999999999999999999876532 23334455899999999999999
Q ss_pred CCccCcccccCCCC-CccccccCHHHHHHHHHHHHHHHHHhCCc-------------EEEeccCCCCCCccHHHHHHHHH
Q 023032 131 PLRPGGGVVFGPKP-RDWSIKINKKEKRLAISTAIASAAAAENT-------------IVVEEFDGKFERPKTKEFIEAMR 196 (288)
Q Consensus 131 P~~rGGGvafGPkP-Rd~~~klNkK~rrlAl~sALs~k~~~~~l-------------iVVd~~~~~~e~~KTK~~~~~Lk 196 (288)
|+|||||+||||+| |||+++||||+|++||++|||+++.++.+ +|||++. ++.||||+++++|+
T Consensus 81 P~~rGGG~a~gPkp~r~~~~klnkK~r~lAl~~aLs~k~~~~~v~~~g~~~~~~~~~iV~~~~~--~~~~KTK~~~~~L~ 158 (246)
T d1vqoc1 81 PQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDF--EDLVKTQEVVSLLE 158 (246)
T ss_dssp TTSTTCCCSSCCCTTCCCCCCCCHHHHHHHHHHHHHHTTCHHHHHHHTCCCCCSSCSEEECGGG--GGCCCHHHHHHHHH
T ss_pred CCcCCCceecCCCCccchhHHHHHHHHHHHHHHHHHHhhcccceeeecccccCCCCCEEecccc--cccccHHHHHHHHH
Confidence 99999999999998 99999999999999999999999877654 6888874 57799999999999
Q ss_pred HcCCCCC---------------------CceEEEEeccchhHHHhhhcCCCceeecCCCcchhhhcCCCc----EEEcHH
Q 023032 197 RWGLDPK---------------------QKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAET----LVLTPS 251 (288)
Q Consensus 197 ~lg~~~~---------------------~k~LiV~~~~~~nl~~s~RNIp~V~v~~~~~Lnv~dLL~~~~----lViT~~ 251 (288)
++++..+ .+.|+++.+.++|+.+|+||||+|+++++++|||||||+++. ||||++
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~k~~~~vl~~~~~~~~~a~rNip~v~v~~~~~lNv~dll~~~~l~r~vV~T~~ 238 (246)
T d1vqoc1 159 ALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSDEPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTES 238 (246)
T ss_dssp TTTCTHHHHHTSCCEECSSGGGGGTCCEECCCCCEEEESSSCCTTTTTSTTCEEEETTTCCHHHHSGGGCCCCCEEEEHH
T ss_pred hcCCccceeeecccccccccccccccccccccccccccChHHHHHHcCCCCCEEEeCCCccHHHccccCCCCceEEEeHH
Confidence 9998521 134566656678999999999999999999999999999754 799999
Q ss_pred HHHHHHHh
Q 023032 252 TVDFLNGR 259 (288)
Q Consensus 252 Al~~L~e~ 259 (288)
||+.|++|
T Consensus 239 Al~~leeR 246 (246)
T d1vqoc1 239 ALAEVAER 246 (246)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhcC
Confidence 99999875
No 6
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=86.46 E-value=0.13 Score=44.24 Aligned_cols=89 Identities=24% Similarity=0.153 Sum_probs=56.7
Q ss_pred CCCCchHHHHHHHHHHHHhhC-CCCcccccccceecCCCC-CCcccCCCCccccCCCCCCCccCcccccCCC-CCccccc
Q 023032 74 AAPDTARAVVHRALITDMQNK-RRGTASTLTRGEVRGGGR-KPYSQKKTGRARRGSNRTPLRPGGGVVFGPK-PRDWSIK 150 (288)
Q Consensus 74 F~~~~~~dllh~~v~~~~a~~-RqGTa~TKtR~EV~GsgR-KP~~QKGTGRAR~Gs~rsP~~rGGGvafGPk-PRd~~~k 150 (288)
+..++-.++|......+++.. ..-|+.++||+|++|+|+ ++|.|+++|++|.....----+--|---+-. -.....|
T Consensus 26 ~r~dlvh~~v~~~~an~Rqgt~~~k~~g~~t~a~~~g~g~~qk~tgrar~g~rrsP~~rGGG~a~gPkp~r~~~~klnkK 105 (246)
T d1vqoc1 26 VRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRARRVPQAVKGRSAHPPKTEKDRSLDLNDK 105 (246)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCCCCTTTTTCCCCBCCCSSSSCCCCCEETTEECSSTTSTTCCCSSCCCTTCCCCCCCCHH
T ss_pred CCHHHHHHHHHHHHHhcccCcCCCchhheeeeeeecCccccccCCCccccCCccCCCcCCCceecCCCCccchhHHHHHH
Confidence 456666777777777777765 456788899999999997 8899999999986553321112122211233 2344555
Q ss_pred cCHHHHHHHHHH
Q 023032 151 INKKEKRLAIST 162 (288)
Q Consensus 151 lNkK~rrlAl~s 162 (288)
+-+.-.+.||..
T Consensus 106 ~r~lAl~~aLs~ 117 (246)
T d1vqoc1 106 ERQLAVRSALAA 117 (246)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555566666553
No 7
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=51.97 E-value=3.8 Score=34.62 Aligned_cols=57 Identities=7% Similarity=0.096 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccch
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE 215 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~ 215 (288)
+|.|++.||+. +-++++.|+-...+|...+.++.++++++.-.....+++|+++.++
T Consensus 147 QRvaiARaL~~---~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd~~~ 203 (242)
T d1oxxk2 147 QRVALARALVK---DPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPAD 203 (242)
T ss_dssp HHHHHHHHHTT---CCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHHH
T ss_pred hHHHHHhHHhh---cccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECCHHH
Confidence 34556555544 2478888987666777677778888777632111136677666443
No 8
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=47.98 E-value=3.5 Score=34.71 Aligned_cols=62 Identities=11% Similarity=0.219 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhHHHh
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKS 220 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl~~s 220 (288)
+|.|+..||+. +-++++.|+-...+|..-..++.++++++.-.....+++|+++.++-...+
T Consensus 143 QRvaiAraL~~---~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~~~a~~~~ 204 (239)
T d1v43a3 143 QRVAVARAIVV---EPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMG 204 (239)
T ss_dssp HHHHHHHHHTT---CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHC
T ss_pred HHHHHHhhhcc---CCCceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhC
Confidence 45677777663 357888998765566555667777777652111124677777755444433
No 9
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=45.16 E-value=23 Score=27.74 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHH-hCCcEEEeccCCCCCCccHHHHHHHHHHcC
Q 023032 158 LAISTAIASAAA-AENTIVVEEFDGKFERPKTKEFIEAMRRWG 199 (288)
Q Consensus 158 lAl~sALs~k~~-~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg 199 (288)
+|++.|++.... +..++++|+....++..-.+.++++|+++.
T Consensus 212 la~~la~~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~ 254 (292)
T g1f2t.1 212 LAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYL 254 (292)
T ss_dssp HHHHHHHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTG
T ss_pred HHHHHHHhhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 566777765553 346888999776676666788899999873
No 10
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=44.76 E-value=6.5 Score=32.68 Aligned_cols=58 Identities=14% Similarity=0.161 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhH
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENV 217 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl 217 (288)
+|+++..||+.. -+++++|+-...++..-..++.++++++.-. ...+++++++.++-.
T Consensus 146 Qrv~iAraL~~~---P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~-g~til~~tH~l~~~~ 203 (240)
T d1ji0a_ 146 QMLAIGRALMSR---PKLLMMDEPSLGLAPILVSEVFEVIQKINQE-GTTILLVEQNALGAL 203 (240)
T ss_dssp HHHHHHHHHTTC---CSEEEEECTTTTCCHHHHHHHHHHHHHHHHT-TCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHhC---CCEeeecCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHH
Confidence 456777776553 5788999876667766677888888887422 223666666654433
No 11
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=41.74 E-value=6.1 Score=33.15 Aligned_cols=57 Identities=11% Similarity=0.192 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccch
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE 215 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~ 215 (288)
+|.|+..||+.. -++++.|+-...+|..-+.++.++|+++.-.....+++|+++.++
T Consensus 146 QRv~IAraL~~~---P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~~ 202 (240)
T d1g2912 146 QRVALGRAIVRK---PQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVE 202 (240)
T ss_dssp HHHHHHHHHHTC---CSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHH
T ss_pred HHHHHHHHHhcC---CCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHHH
Confidence 456666666543 578888987656676666677777766521101146777776544
No 12
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=39.97 E-value=8.7 Score=32.26 Aligned_cols=59 Identities=14% Similarity=0.249 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhH
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENV 217 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl 217 (288)
.+|.++..||+. +-++++.|+-...+|..-++++.++|+++.-. ...+|+|+++.+.-.
T Consensus 155 ~QRv~iAraL~~---~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~-g~til~vtHdl~~~~ 213 (258)
T d1b0ua_ 155 QQRVSIARALAM---EPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFAR 213 (258)
T ss_dssp HHHHHHHHHHHT---CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHT-TCCEEEECSCHHHHH
T ss_pred HHHHHHHHHHhc---CCCEEEeccccccCCHHHHHHHHHhhhhhccc-CCceEEEeCCHHHHH
Confidence 456777777764 45788899876667766677888888887421 223677766654433
No 13
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=39.78 E-value=5.2 Score=33.57 Aligned_cols=58 Identities=17% Similarity=0.302 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccch
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSE 215 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~ 215 (288)
..|.|+..||+.. -++++.|+-...+|.....++.++|+.+.-.....+|+|+++.+.
T Consensus 146 ~QRvaiAraL~~~---P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHdl~~ 203 (240)
T d3dhwc1 146 KQRVAIARALASN---PKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDV 203 (240)
T ss_dssp HHHHHHHHHHHTC---CSEEEEESGGGSSCHHHHHHHHHHHHHHHHHHCCEEEEEBSCHHH
T ss_pred HHHHHHhhhhccC---CCeEEeccccccCCHHHhhHHHHHHHHHHhccCCEEEEEcCCHHH
Confidence 4568888888754 678889986656666556677777776522101136777665443
No 14
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=39.53 E-value=5.1 Score=33.45 Aligned_cols=59 Identities=10% Similarity=0.177 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhHH
Q 023032 157 RLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVE 218 (288)
Q Consensus 157 rlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl~ 218 (288)
|+|+..||+. +-.+++.|+-...+|..-..++.++|+++.-..+..+++|+++.++-..
T Consensus 138 RvaiAraL~~---~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~ 196 (232)
T d2awna2 138 RVAIGRTLVA---EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMT 196 (232)
T ss_dssp --CHHHHHHT---CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHHHHHH
T ss_pred HHHHHHHHhc---CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 3455555442 2478888886655554334456677776522111236777766544333
No 15
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.14 E-value=13 Score=30.92 Aligned_cols=55 Identities=4% Similarity=0.107 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
..|+|+..||.. +-.++++|+....+|......+.++|.++.-..+..+++|+++
T Consensus 157 kQRvaiARal~~---~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~ 211 (251)
T d1jj7a_ 157 RQAVALARALIR---KPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQH 211 (251)
T ss_dssp HHHHHHHHHHTT---CCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSC
T ss_pred ceEEEEeecccc---CCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCC
Confidence 456788887754 4678899997766776555677888877532112235666655
No 16
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=38.33 E-value=24 Score=29.29 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
.|+|+..||.. ...++|+|+....++....+.+.+.|+.+.- +..+++|+++
T Consensus 161 QRi~iARal~~---~p~ililDEpts~LD~~t~~~i~~~l~~l~~--~~TvI~itH~ 212 (255)
T d2hyda1 161 QRLSIARIFLN---NPPILILDEATSALDLESESIIQEALDVLSK--DRTTLIVAHR 212 (255)
T ss_dssp HHHHHHHHHHH---CCSEEEEESTTTTCCHHHHHHHHHHHHHHTT--TSEEEEECSS
T ss_pred HHHHHHHHHhc---CCCEEEEeCccccCCHHHHHHHHHHHHHHhc--CCEEEEEeCC
Confidence 46888888854 4678899997766765555567778887643 2335555544
No 17
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=37.00 E-value=18 Score=30.08 Aligned_cols=52 Identities=12% Similarity=0.270 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
.|+||..||.. +..++|+|+....++....+.+.+.|+++.- +..+++|+++
T Consensus 159 QRvaiARal~~---~p~ililDEpts~LD~~~~~~i~~~l~~l~~--~~Tvi~itH~ 210 (253)
T d3b60a1 159 QRIAIARALLR---DSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHR 210 (253)
T ss_dssp HHHHHHHHHHH---CCSEEEEETTTSSCCHHHHHHHHHHHHHHHT--TSEEEEECSC
T ss_pred HHHHHHHHHhc---CCCEEEeccccccCCHHHHHHHHHHHHHhcc--CCEEEEEECC
Confidence 45888888865 4678899997766776656677888888632 2335666554
No 18
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=34.60 E-value=12 Score=31.03 Aligned_cols=54 Identities=13% Similarity=0.338 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
.|.|+..||+. +-++++.|+-...+|..-..++.++|+++.-.....+++|+++
T Consensus 152 QRvaIAraL~~---~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd 205 (230)
T d1l2ta_ 152 QRVAIARALAN---NPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHD 205 (230)
T ss_dssp HHHHHHHHHTT---CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred HHHHHHhhhhc---CCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCC
Confidence 46777777753 3578888987666665566678888888632111135555554
No 19
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=33.86 E-value=7.8 Score=32.22 Aligned_cols=62 Identities=11% Similarity=0.153 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhHHH
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEK 219 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl~~ 219 (288)
.+|+|+..||.. .-++++.|+-...++..-..++.++++.+.-.....+++|+++.++-...
T Consensus 133 ~QRvaiAraL~~---~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~~~~~~ 194 (229)
T d3d31a2 133 QQRVALARALVT---NPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIM 194 (229)
T ss_dssp HHHHHHHHHTTS---CCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred hcchhhhhhhhc---cCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHh
Confidence 456777777764 35788899876556655556677777665211111367777665443333
No 20
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=33.69 E-value=7.5 Score=32.64 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhH
Q 023032 156 KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENV 217 (288)
Q Consensus 156 rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl 217 (288)
+|.|+..||+.. -++++.|+-...++..-...+.++++.+.-.....+++|+++.++-.
T Consensus 133 QRvaiAral~~~---P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~~~~~ 191 (240)
T d2onka1 133 QRVALARALVIQ---PRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAA 191 (240)
T ss_dssp HHHHHHHHHTTC---CSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHhcc---CCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 345555555433 47888998665566555556667776652210113677776654433
No 21
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=30.58 E-value=11 Score=31.27 Aligned_cols=56 Identities=9% Similarity=0.129 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccc
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~ 214 (288)
.+|+++..||+.. -+++++|+-...++....+.+.++++.+.-. ...+++++++.+
T Consensus 139 ~qrv~iA~al~~~---p~illLDEPt~gLD~~~~~~i~~~i~~~~~~-g~tii~~tH~l~ 194 (238)
T d1vpla_ 139 VRKLLIARALMVN---PRLAILDEPTSGLDVLNAREVRKILKQASQE-GLTILVSSHNML 194 (238)
T ss_dssp HHHHHHHHHHTTC---CSEEEEESTTTTCCHHHHHHHHHHHHHHHHT-TCEEEEEECCHH
T ss_pred HHHHHHHHHHhcC---CCEEEecCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEeCCHH
Confidence 3456666666543 4788899877667766677788888776322 223566666543
No 22
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=30.35 E-value=16 Score=29.75 Aligned_cols=58 Identities=5% Similarity=0.129 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHH----hCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccc
Q 023032 156 KRLAISTAIASAAA----AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVS 214 (288)
Q Consensus 156 rrlAl~sALs~k~~----~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~ 214 (288)
+|+++..||....- +-+++++|+-...+|..-.+.+.++++++.-. ...+++++++.+
T Consensus 132 Qrv~iA~al~~~~p~~~p~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~-g~tii~vtHdl~ 193 (231)
T d1l7vc_ 132 QRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQ-GLAIVMSSHDLN 193 (231)
T ss_dssp HHHHHHHHHHHHCTTTCTTCCEEEESSCSTTCCHHHHHHHHHHHHHHHHT-TCEEEECCCCHH
T ss_pred HHHHHHHHHHhhCcccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeCCHH
Confidence 46778887765221 23789999977777765566777788776321 123455555533
No 23
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=30.11 E-value=17 Score=30.11 Aligned_cols=65 Identities=9% Similarity=0.063 Sum_probs=39.1
Q ss_pred cccCHHH-HHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhH
Q 023032 149 IKINKKE-KRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENV 217 (288)
Q Consensus 149 ~klNkK~-rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl 217 (288)
..|.-=+ +|+++..||+. +-+++++|+-...++..-..++.++++++.-. ...+|+|.++.++-.
T Consensus 149 ~~LSgG~~Qrv~iAraL~~---~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~-g~til~vsHdl~~~~ 214 (254)
T d1g6ha_ 149 GELSGGQMKLVEIGRALMT---NPKMIVMDEPIAGVAPGLAHDIFNHVLELKAK-GITFLIIEHRLDIVL 214 (254)
T ss_dssp GGSCHHHHHHHHHHHHHHT---CCSEEEEESTTTTCCHHHHHHHHHHHHHHHHT-TCEEEEECSCCSTTG
T ss_pred hhCCcHHHHHHHHHHHHHh---CcCchhhcCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCcHHHHH
Confidence 3444433 45666777653 35789999876566655566777888776321 123566666665533
No 24
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=28.58 E-value=24 Score=28.93 Aligned_cols=53 Identities=13% Similarity=0.203 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
..|+|+..||.. +-.++++|+....+|....+.+.+.|+.+.- +..+++|+++
T Consensus 145 kQRv~iARal~~---~p~ililDEpts~LD~~~~~~i~~~l~~l~~--~~Tvi~itH~ 197 (242)
T d1mv5a_ 145 RQRLAIARAFLR---NPKILMLDEATASLDSESESMVQKALDSLMK--GRTTLVIAHR 197 (242)
T ss_dssp HHHHHHHHHHHH---CCSEEEEECCSCSSCSSSCCHHHHHHHHHHT--TSEEEEECCS
T ss_pred HHHHHHHHHHhc---CCCEEEecCCccccCHHHHHHHHHHHHHHcC--CCEEEEEECC
Confidence 456888888875 4578899997777787666778888888732 2335555554
No 25
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=27.66 E-value=28 Score=28.58 Aligned_cols=53 Identities=11% Similarity=0.256 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEec
Q 023032 155 EKRLAISTAIASAAAAENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVME 212 (288)
Q Consensus 155 ~rrlAl~sALs~k~~~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~ 212 (288)
..|+|+..||. .+..+++.|+....++....+.+.+.|+.+.- +..+++|+++
T Consensus 145 ~QRvalARal~---~~p~ililDEpts~LD~~~~~~i~~~l~~l~~--~~Tvi~itH~ 197 (241)
T d2pmka1 145 RQRIAIARALV---NNPKILIFDEATSALDYESEHVIMRNMHKICK--GRTVIIIAHR 197 (241)
T ss_dssp HHHHHHHHHHT---TCCSEEEECCCCSCCCHHHHHHHHHHHHHHHT--TSEEEEECSS
T ss_pred HHHHhhhhhhh---cccchhhhhCCccccCHHHHHHHHHHHHHHhC--CCEEEEEECC
Confidence 45678888775 34678899987666776666677888887632 2235555554
No 26
>d1blea_ c.38.1.1 (A:) Fructose permease, subunit IIb {Bacillus subtilis [TaxId: 1423]}
Probab=22.86 E-value=1.2e+02 Score=23.05 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=55.2
Q ss_pred HHHHHHHHhCCcEEEeccCC---------CCCC--------ccHHHHHHHHHHcCCCCCCceEEEEeccchhHHHhhhcC
Q 023032 162 TAIASAAAAENTIVVEEFDG---------KFER--------PKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNI 224 (288)
Q Consensus 162 sALs~k~~~~~liVVd~~~~---------~~e~--------~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl~~s~RNI 224 (288)
+.....+..+.++||||-.. .+.. -...++++.+++-..+ +.++|+|+.+. .++.....+-
T Consensus 19 ~~W~~~~~~~~IiVvdD~~A~D~~~k~~l~ma~P~gvk~~i~sve~a~~~l~~~~~~-~~~v~vl~~~~-~da~~l~~~g 96 (161)
T d1blea_ 19 TRWIKVHAADRIIVVSDDIAQDEMRKTLILSVAPSNVKASAVSVSKMAKAFHSPRYE-GVTAMLLFENP-SDIVSLIEAG 96 (161)
T ss_dssp HHHHHHHTCSEEEEECHHHHHCHHHHHHHHTSSCTTSEEEEECHHHHHHHHHCSTTT-TCEEEEEESSS-HHHHHHHTTT
T ss_pred hhhhcccCCCEEEEEcchhhCCHHHHHHHHhhCCCCCeEEEEEHHHHHHHHhCcccc-CceEEEEeCCH-HHHHHHHHcC
Confidence 45566666778888887210 0111 2255778888765443 34688888654 4455555554
Q ss_pred CCceeecCCCcchhhh--cCCCcEEEcHHHHHHHHHhhC
Q 023032 225 GTLKMLTPRTLNLFDI--LDAETLVLTPSTVDFLNGRYG 261 (288)
Q Consensus 225 p~V~v~~~~~Lnv~dL--L~~~~lViT~~Al~~L~e~~~ 261 (288)
..++-+++.++.-..= .-.+.+.++++=++.|++...
T Consensus 97 ~~i~~lNvG~m~~~~g~~~v~~~v~l~~ee~~~lk~l~~ 135 (161)
T d1blea_ 97 VPIKTVNVGGMRFENHRRQITKSVSVTEQDIKAFETLSD 135 (161)
T ss_dssp CCCCEEEEEEBCCCTTSEECSSSBEECHHHHHHHHHHHH
T ss_pred CCCCEEEEecCcCCCCCEEEecceeeCHHHHHHHHHHHH
Confidence 4444443333322110 115688999988877776654
No 27
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=22.54 E-value=98 Score=23.85 Aligned_cols=67 Identities=13% Similarity=0.239 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHH-hCCcEEEeccCCCCCCccHHHHHHHHHHcCCCCCCceEEEEeccchhHHHhhhcC
Q 023032 155 EKRLAISTAIASAAA-AENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNI 224 (288)
Q Consensus 155 ~rrlAl~sALs~k~~-~~~liVVd~~~~~~e~~KTK~~~~~Lk~lg~~~~~k~LiV~~~~~~nl~~s~RNI 224 (288)
.-.+|++.|++.... ...++++|+....++..--+.++++|+++.-. ...++++++ +..+...+.++
T Consensus 286 ~~~la~~l~~~~~~~~~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~-~~QviitTH--s~~~~~~~d~~ 353 (369)
T g1ii8.1 286 ALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKK-IPQVILVSH--DEELKDAADHV 353 (369)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEEECCSSSSCSHHHHHHHHHHHHTGGG-SSEEEEEES--CGGGGGTSSEE
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEec--hHHHHHhCCEE
Confidence 334555566555443 34678899987667766677888999886321 112444443 34455555554
No 28
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]}
Probab=21.30 E-value=30 Score=27.15 Aligned_cols=29 Identities=10% Similarity=0.142 Sum_probs=21.8
Q ss_pred hCCcEEEeccCCCCCCcc-HHHHHHHHHHcCCC
Q 023032 170 AENTIVVEEFDGKFERPK-TKEFIEAMRRWGLD 201 (288)
Q Consensus 170 ~~~liVVd~~~~~~e~~K-TK~~~~~Lk~lg~~ 201 (288)
-.+++||||+ +.+.. .+.+++++++.|..
T Consensus 116 g~rVlIVDDv---i~TGgT~~aa~~ll~~~Ga~ 145 (181)
T d1l1qa_ 116 HDVVLLHDDV---LATGGTLLAAIELCETAGVK 145 (181)
T ss_dssp TCCEEEEEEE---ESSSHHHHHHHHHHHHTTCC
T ss_pred CCeeEEehhh---hhhcHHHHHHHHHHHHCCCc
Confidence 3578999997 56644 56788899998874
Done!