Query 023033
Match_columns 288
No_of_seqs 232 out of 1177
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 15:12:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023033.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023033hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.9E-72 6.5E-77 513.4 25.5 276 2-281 5-296 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.2E-66 2.8E-70 462.4 22.3 236 35-279 4-254 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 8.4E-65 2.9E-69 456.3 21.3 236 36-281 2-242 (319)
4 1odm_A Isopenicillin N synthas 100.0 4.2E-63 1.4E-67 448.0 23.1 233 35-279 6-276 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.3E-62 4.4E-67 441.1 21.3 228 35-279 2-249 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 4.6E-61 1.6E-65 424.8 22.0 224 36-279 2-237 (280)
7 3dkq_A PKHD-type hydroxylase S 84.0 4.6 0.00016 33.9 8.4 84 165-257 72-172 (243)
8 2hbt_A EGL nine homolog 1; pro 80.1 23 0.0008 29.5 11.5 37 56-93 14-50 (247)
9 3o2g_A Gamma-butyrobetaine dio 58.1 4.7 0.00016 36.2 2.4 52 37-96 122-173 (388)
10 2dbn_A Hypothetical protein YB 53.1 8.1 0.00028 35.4 3.0 54 35-95 98-151 (461)
11 1m5a_B Insulin B chain; alpha 49.3 19 0.00064 19.6 2.9 18 56-73 10-27 (30)
12 2jig_A Prolyl-4 hydroxylase; h 46.9 41 0.0014 27.2 6.3 71 197-278 100-203 (224)
13 1otj_A Alpha-ketoglutarate-dep 46.2 18 0.00063 30.4 4.1 49 36-93 16-64 (283)
14 3itq_A Prolyl 4-hydroxylase, a 45.6 55 0.0019 26.6 6.7 70 196-278 112-198 (216)
15 4ay7_A Methylcobalamin\: coenz 43.5 39 0.0013 29.5 5.9 47 46-95 298-348 (348)
16 3tht_A Alkylated DNA repair pr 41.4 36 0.0012 30.0 5.3 64 196-267 199-269 (345)
17 1oih_A Putative alkylsulfatase 39.0 29 0.00099 29.5 4.3 51 36-95 26-77 (301)
18 2opi_A L-fuculose-1-phosphate 38.7 20 0.00067 29.1 2.9 49 37-91 125-175 (212)
19 2da7_A Zinc finger homeobox pr 38.2 16 0.00053 24.4 1.8 39 149-187 15-53 (71)
20 2fk5_A Fuculose-1-phosphate al 35.5 39 0.0013 27.0 4.2 51 37-93 117-176 (200)
21 1otf_A 4-oxalocrotonate tautom 35.4 31 0.0011 21.3 3.0 29 39-67 1-29 (62)
22 2opa_A Probable tautomerase YW 34.3 33 0.0011 21.1 3.0 29 39-67 1-29 (61)
23 3i3q_A Alpha-ketoglutarate-dep 33.9 1.8E+02 0.0063 23.3 8.8 62 197-267 107-178 (211)
24 3m20_A 4-oxalocrotonate tautom 33.8 48 0.0017 20.7 3.7 28 39-67 1-28 (62)
25 1pvt_A Sugar-phosphate aldolas 32.4 31 0.0011 28.4 3.3 51 37-93 161-213 (238)
26 1e4c_P L-fuculose 1-phosphate 31.4 29 0.001 28.1 2.9 49 37-91 122-172 (215)
27 3pvj_A Alpha-ketoglutarate-dep 31.3 38 0.0013 28.6 3.7 49 36-93 14-62 (277)
28 3r1j_A Alpha-ketoglutarate-dep 31.3 50 0.0017 28.3 4.5 51 36-95 20-71 (301)
29 2iuw_A Alkylated repair protei 31.0 1.2E+02 0.004 24.9 6.6 64 197-267 128-210 (238)
30 3ghf_A Septum site-determining 30.2 72 0.0025 23.2 4.6 36 40-81 51-86 (120)
31 2x4k_A 4-oxalocrotonate tautom 29.7 41 0.0014 20.5 2.8 31 38-68 3-33 (63)
32 3m0z_A Putative aldolase; MCSG 28.5 66 0.0023 26.6 4.4 39 53-92 171-210 (249)
33 3jsy_A Acidic ribosomal protei 28.2 96 0.0033 25.1 5.5 40 52-91 3-43 (213)
34 2rg4_A Uncharacterized protein 27.8 2.3E+02 0.008 22.6 10.8 29 240-280 166-194 (216)
35 3ry0_A Putative tautomerase; o 27.1 51 0.0017 20.7 3.0 29 39-67 1-29 (65)
36 3abf_A 4-oxalocrotonate tautom 26.6 48 0.0016 20.5 2.7 29 39-67 2-30 (64)
37 3m6y_A 4-hydroxy-2-oxoglutarat 26.5 70 0.0024 26.8 4.2 39 53-92 194-233 (275)
38 2j01_J 50S ribosomal protein L 25.6 1.7E+02 0.0057 22.7 6.3 39 53-91 5-45 (173)
39 2z7b_A MLR6791 protein; class 25.5 58 0.002 27.4 3.8 52 37-92 157-217 (270)
40 2v9l_A Rhamnulose-1-phosphate 25.4 39 0.0013 28.5 2.7 51 37-93 179-231 (274)
41 1zav_A 50S ribosomal protein L 25.2 1.6E+02 0.0056 22.9 6.2 41 52-92 6-47 (180)
42 1gyx_A YDCE, B1461, hypothetic 24.8 68 0.0023 20.9 3.3 45 39-83 1-51 (76)
43 2irp_A Putative aldolase class 24.7 34 0.0012 27.4 2.1 50 37-93 139-193 (208)
44 3m21_A Probable tautomerase HP 24.0 64 0.0022 20.4 3.0 18 50-67 15-32 (67)
45 3mb2_A 4-oxalocrotonate tautom 23.8 54 0.0019 21.1 2.7 29 39-67 2-30 (72)
46 1y66_A Engrailed homeodomain; 22.2 1.1E+02 0.0038 17.9 3.3 38 150-187 8-45 (52)
47 2ww6_A Fibritin, T4 fibritin; 21.6 51 0.0018 17.3 1.6 13 234-246 12-24 (27)
48 3ocr_A Class II aldolase/adduc 21.4 62 0.0021 27.3 3.2 52 37-93 156-209 (273)
49 2do1_A Nuclear protein HCC-1; 21.1 1.1E+02 0.0036 19.2 3.4 30 58-90 15-44 (55)
50 3ej9_A Alpha-subunit of trans- 20.3 78 0.0027 20.7 2.9 29 39-67 2-30 (76)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.9e-72 Score=513.41 Aligned_cols=276 Identities=32% Similarity=0.551 Sum_probs=246.5
Q ss_pred cchhhhhhcCCCCCCCCCCcCCCCCCCcCCC----C---CCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEE
Q 023033 2 FCVKGLSESGRLTSVPSKYFFEKDLNDDCIN----S---EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVI 74 (288)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~----~---~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~ 74 (288)
-+||+|+++| +++||++|++|+++++.... . ...+||+|||+.|.++++++|.+++++|.+||++||||||+
T Consensus 5 ~~v~~l~~~~-~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~ 83 (356)
T 1gp6_A 5 ERVESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI 83 (356)
T ss_dssp CCHHHHHHTT-CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred ccHHHHHhcC-CCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence 4699999998 99999999999887765321 0 12469999999998888878899999999999999999999
Q ss_pred eCCCChHHHHHHHHHHHHHhcCCHHHHHhhhcCCC-CCceeccccccccCCccccccccccccccC-----CCCCCCCCc
Q 023033 75 NHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKL-FDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPL 148 (288)
Q Consensus 75 nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~~gy~~~~~~~~~~~~d~~e~~~~~~~~-----~~~wP~~~~ 148 (288)
||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.++..+ .+.||+.++
T Consensus 84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~ 163 (356)
T 1gp6_A 84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS 163 (356)
T ss_dssp SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence 99999999999999999999999999999966544 567899876544456678999999987644 356999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccccC--CCcceeEeeccCCCCCCCCccCCCCccccCceEEE
Q 023033 149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLET--DSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTIL 226 (288)
Q Consensus 149 ~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~--~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL 226 (288)
+||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+ .. .+.+.||++|||||+.++..+|+++|||+|+||||
T Consensus 164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~--~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEV--GGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHT--THHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh--cccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 999999999999999999999999999999999999988 41 26678999999999998889999999999999999
Q ss_pred EcCCCCCeEEeeCCeeEeecCCCCcEEEEechhhhHHhhcC-CcCCCceEEeCCcc
Q 023033 227 MQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNH-FYLYLHSIYSLNVC 281 (288)
Q Consensus 227 ~q~~~~GLqv~~~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG-~~s~~HRV~~~~~~ 281 (288)
+||+++||||+++|+|++|+|.||++|||+||+||+ |||| ||||+|||+++++.
T Consensus 242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~-~TnG~~kS~~HRVv~~~~~ 296 (356)
T 1gp6_A 242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEI-LSNGKYKSILHRGLVNKEK 296 (356)
T ss_dssp EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHH-HTTTSSCCCCEEECCCSSC
T ss_pred EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHH-hcCCEeeccCceecCCCCC
Confidence 999999999999999999999999999999999999 9999 99999999987644
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.2e-66 Score=462.35 Aligned_cols=236 Identities=23% Similarity=0.414 Sum_probs=208.2
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHHhhhcCCCCCcee
Q 023033 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR 114 (288)
Q Consensus 35 ~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~g 114 (288)
+.+||||||+.+.+ +|++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+|
T Consensus 4 ~~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~G 78 (312)
T 3oox_A 4 TSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARG 78 (312)
T ss_dssp CCSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSE
T ss_pred CCCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccc
Confidence 46799999998753 4668999999999999999999999999999999999999999999999999654 445678
Q ss_pred ccccccc--cCCcccccccccccccc-----------CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 023033 115 WGTSFNV--NVDKTLFWRDYLKIHVH-----------PQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEES 181 (288)
Q Consensus 115 y~~~~~~--~~~~~~d~~e~~~~~~~-----------~~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~ 181 (288)
|...... ...+..||+|.|.++.. +.|.||+.+|+||+.+++|+++|.+|+.+|+++|+++||++++
T Consensus 79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 158 (312)
T 3oox_A 79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD 158 (312)
T ss_dssp EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence 8543211 22356899999987641 2467999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCcceeEeeccCCCCCCCCccCCCCccccCceEEEEcCCCCCeEEee-CCeeEeecCCCCcEEEEechhh
Q 023033 182 YIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRH-DGKWIPVNPPPGSFVVNIGDHM 260 (288)
Q Consensus 182 ~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q~~~~GLqv~~-~g~W~~V~~~~~~~vVn~Gd~l 260 (288)
+|.+.+ . .+.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++|||+||+|
T Consensus 159 ~f~~~~--~-~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l 235 (312)
T 3oox_A 159 FFKPTV--Q-DGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDML 235 (312)
T ss_dssp TTHHHH--T-TCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHH
T ss_pred HHHHHh--c-CCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHH
Confidence 999998 6 66789999999999876555999999999999999999999999986 9999999999999999999999
Q ss_pred hHHhhcC-CcCCCceEEeCC
Q 023033 261 EVILSNH-FYLYLHSIYSLN 279 (288)
Q Consensus 261 ~~~~TnG-~~s~~HRV~~~~ 279 (288)
|+ |||| ||||+|||++++
T Consensus 236 ~~-~TnG~~kS~~HRVv~~~ 254 (312)
T 3oox_A 236 ER-LTNNVLPSTVHRVVNPP 254 (312)
T ss_dssp HH-HTTTSSCCCCEEECCCC
T ss_pred HH-HhCCeecCCCceEeCCC
Confidence 99 9999 999999998874
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8.4e-65 Score=456.35 Aligned_cols=236 Identities=30% Similarity=0.563 Sum_probs=208.8
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHHhhhcCCCCCceec
Q 023033 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW 115 (288)
Q Consensus 36 ~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~gy 115 (288)
.+||||||+.+. +++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||
T Consensus 2 ~~iPvIDls~l~---~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy 74 (319)
T 1w9y_A 2 ENFPIISLDKVN---GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKAL 74 (319)
T ss_dssp CCCCEEEGGGGG---STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
T ss_pred CCCCEEECcccC---cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCC
Confidence 469999999985 235778999999999999999999999999999999999999999999999998532 2477
Q ss_pred cccccccCCccccccccccccccC---CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccccCC
Q 023033 116 GTSFNVNVDKTLFWRDYLKIHVHP---QFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETD 192 (288)
Q Consensus 116 ~~~~~~~~~~~~d~~e~~~~~~~~---~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~ 192 (288)
+... ...+..||+|.|.++..| .+.||+.+++||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+.....
T Consensus 75 ~~~~--~e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 75 EGVQ--AEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp TTCC--CCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred Cccc--ccCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 5432 223567999999987654 35699999999999999999999999999999999999999999998821113
Q ss_pred CcceeEeeccCCCCCCCCccCCCCccccCceEEEEcC-CCCCeEEeeCCeeEeecCCCCcEEEEechhhhHHhhcC-CcC
Q 023033 193 SHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQN-DHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNH-FYL 270 (288)
Q Consensus 193 ~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q~-~~~GLqv~~~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG-~~s 270 (288)
+.+.||++|||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+ |||| |||
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~-~SnG~~kS 231 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEV-ITNGKYKS 231 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHH-HTTTSSCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHH-HhCCeeec
Confidence 5678999999999998889999999999999999995 799999999999999999999999999999999 9999 999
Q ss_pred CCceEEeCCcc
Q 023033 271 YLHSIYSLNVC 281 (288)
Q Consensus 271 ~~HRV~~~~~~ 281 (288)
++|||++++..
T Consensus 232 ~~HRVv~~~~~ 242 (319)
T 1w9y_A 232 VMHRVIAQKDG 242 (319)
T ss_dssp CCEEECCCSSS
T ss_pred ccceecCCCCC
Confidence 99999987543
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.2e-63 Score=448.02 Aligned_cols=233 Identities=22% Similarity=0.338 Sum_probs=206.4
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH-hcCCHHHHHhhhcCCCCCce
Q 023033 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF-FDLSDEQKREYAGKKLFDPI 113 (288)
Q Consensus 35 ~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~~ 113 (288)
..+||||||+.|.++++++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. .++.
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~---~Gy~ 79 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI---RAYN 79 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC---TTTC
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh---cCCC
Confidence 45799999999988888889999999999999999999999999 999999999999 9999999999954 2333
Q ss_pred eccccccccC------Ccccccccccccccc---------------CCCCCCCC--CcchHHHHHHHHHHHHHHHHHHHH
Q 023033 114 RWGTSFNVNV------DKTLFWRDYLKIHVH---------------PQFNAPQN--PLGFSETIQEYCKRVRELANELLK 170 (288)
Q Consensus 114 gy~~~~~~~~------~~~~d~~e~~~~~~~---------------~~~~wP~~--~~~f~~~~~~y~~~~~~la~~ll~ 170 (288)
+++... ... .+..||+|.|.++.. ..+.||+. +|+||+.+++|+++|.+|+.+|++
T Consensus 80 ~~~~e~-~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~ 158 (331)
T 1odm_A 80 KEHQDQ-VRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLK 158 (331)
T ss_dssp TTCTTC-SSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccc-cccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 333221 111 256799999998742 14679987 899999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHhccccCCCcceeE--eeccC------C---CCCCCC-ccCCCCccccCceEEEEcCCCCCeEEee
Q 023033 171 GIMESLGLEESYIQKAMDLETDSHQLLV--VNLYP------P---CPQPEV-VMGLPPHSDHGLLTILMQNDHVGLHVRH 238 (288)
Q Consensus 171 ~la~~Lgl~~~~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~~~~~HtD~~~lTlL~q~~~~GLqv~~ 238 (288)
+|+++||+++++|.+.+ + .+.+.|| ++||| | |++++. .+|+++|||+|+||||+||+++||||++
T Consensus 159 ~la~~Lgl~~~~f~~~~--~-~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 159 GYALALGKEENFFARHF--K-PDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHTTSCTTTTGGGC--C-TTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHhCCCHHHHHHHh--c-CcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 99999999999999988 6 6778999 99999 7 777776 8999999999999999999999999996
Q ss_pred -CCeeEeecCCCCcEEEEechhhhHHhhcC-CcCCCceEEeCC
Q 023033 239 -DGKWIPVNPPPGSFVVNIGDHMEVILSNH-FYLYLHSIYSLN 279 (288)
Q Consensus 239 -~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG-~~s~~HRV~~~~ 279 (288)
+| |++|+|.||++|||+||+||+ |||| ||||+|||+++.
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~-~TnG~~kS~~HRVv~~~ 276 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAH-LTNNYYKAPIHRVKWVN 276 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHH-HTTTSSCCCCEEEECCC
T ss_pred CCC-eEECCCCCCeEEEEccHHHHH-HhCCEeeCCCceeCCCC
Confidence 88 999999999999999999999 9999 999999999763
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.3e-62 Score=441.08 Aligned_cols=228 Identities=15% Similarity=0.212 Sum_probs=191.5
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCC-HHHHHhhhcCCCCCce
Q 023033 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLS-DEQKREYAGKKLFDPI 113 (288)
Q Consensus 35 ~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lP-~e~K~~~~~~~~~~~~ 113 (288)
..+||||||+.+.+++.. ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++........+
T Consensus 2 ~~~iPvIDls~l~~~~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~ 75 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRR 75 (311)
T ss_dssp CCCCCEEEHHHHHTTCSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSS
T ss_pred CCCCcEEEchhhcCCCHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCC
Confidence 357999999988765541 289999999999999999999999999999999999999 9999999765556678
Q ss_pred eccccccc------cCCccccccccccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CHHHH
Q 023033 114 RWGTSFNV------NVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGL----EESYI 183 (288)
Q Consensus 114 gy~~~~~~------~~~~~~d~~e~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl----~~~~~ 183 (288)
||+..... ...+..||+|.|.++.. .+.|| +++||+.+++|+++|.+|+.+|+++|+++||+ ++++|
T Consensus 76 Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~-~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f 152 (311)
T 1dcs_A 76 GFTGLESESTAQITNTGSYSDYSMCYSMGTA-DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAF 152 (311)
T ss_dssp EEEEC-----------------CEEEEECSS-SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHH
T ss_pred ceeeccccccccccCCCCCCCcceeeeccCC-CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHH
Confidence 99765322 22467899999998866 47899 89999999999999999999999999999999 88887
Q ss_pred HHhccccCCCcceeEeeccCCCCCCC--C--ccCCCCccccCceEEEEcC-CCCC---eEEeeCCeeEeecCCCCcEEEE
Q 023033 184 QKAMDLETDSHQLLVVNLYPPCPQPE--V--VMGLPPHSDHGLLTILMQN-DHVG---LHVRHDGKWIPVNPPPGSFVVN 255 (288)
Q Consensus 184 ~~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~~~~~HtD~~~lTlL~q~-~~~G---Lqv~~~g~W~~V~~~~~~~vVn 255 (288)
.+. .+.||++|||||+.++ + .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+||++|||
T Consensus 153 ~~~-------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVN 225 (311)
T 1dcs_A 153 LDC-------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVF 225 (311)
T ss_dssp HSC-------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEE
T ss_pred hhc-------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEE
Confidence 643 4679999999998763 3 6789999999999999998 8999 9999999999999999999999
Q ss_pred echhhhHHhhcC-CcCCCceEEeCC
Q 023033 256 IGDHMEVILSNH-FYLYLHSIYSLN 279 (288)
Q Consensus 256 ~Gd~l~~~~TnG-~~s~~HRV~~~~ 279 (288)
+||+||+ |||| ||||+|||+.++
T Consensus 226 iGD~l~~-~TnG~~kS~~HRVv~~~ 249 (311)
T 1dcs_A 226 CGAIATL-VTGGQVKAPRHHVAAPR 249 (311)
T ss_dssp ECHHHHH-HTTSCSCCCCEEECCC-
T ss_pred HHHHHHH-HhCCcccCCCceEeCCC
Confidence 9999999 9999 999999999886
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=4.6e-61 Score=424.82 Aligned_cols=224 Identities=22% Similarity=0.322 Sum_probs=190.9
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcCCHHHHHhhhcCCCCCceec
Q 023033 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW 115 (288)
Q Consensus 36 ~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~gy 115 (288)
++||||||+.. +.+++|.+||++||||||+|||||.++++++++.+++||++ |+|+++... +...+||
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~-~~~~~GY 69 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFN-RETHDGF 69 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCC-TTTCCEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccC-CCCCCcc
Confidence 47999999863 35789999999999999999999999999999999999998 789998543 4557899
Q ss_pred cccc-c--ccCCccccccccccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--HH---HHHhc
Q 023033 116 GTSF-N--VNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEE--SY---IQKAM 187 (288)
Q Consensus 116 ~~~~-~--~~~~~~~d~~e~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~--~~---~~~~~ 187 (288)
+... . .......||+|.|.+. .||+.+++||+.+++|+++|.+|+.+|+++|+++||++. ++ |.+.+
T Consensus 70 ~~~~~~e~~~~~~~~D~kE~~~~~-----p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 144 (280)
T 3on7_A 70 FPASISETAKGHTVKDIKEYYHVY-----PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMI 144 (280)
T ss_dssp ECCC--------CCCCSCEEEEEC-----TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHH
T ss_pred ccCccccccCCCCcccHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHh
Confidence 6543 1 1223467999998873 388888999999999999999999999999999999763 22 55665
Q ss_pred cccCCCcceeEeeccCCCCCCC--CccCCCCccccCceEEEEcCCCCCeEEee-CCeeEeecCCCCcEEEEechhhhHHh
Q 023033 188 DLETDSHQLLVVNLYPPCPQPE--VVMGLPPHSDHGLLTILMQNDHVGLHVRH-DGKWIPVNPPPGSFVVNIGDHMEVIL 264 (288)
Q Consensus 188 ~~~~~~~~~lrl~~Yp~~~~~~--~~~~~~~HtD~~~lTlL~q~~~~GLqv~~-~g~W~~V~~~~~~~vVn~Gd~l~~~~ 264 (288)
+....+.||++|||||+.++ ..+|+++|||+|+||||+||+++||||++ +|+|++|+|+||++|||+||+||+ |
T Consensus 145 --~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~-~ 221 (280)
T 3on7_A 145 --ANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQE-A 221 (280)
T ss_dssp --TTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHH-H
T ss_pred --cCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHH-H
Confidence 41334889999999999765 47899999999999999999999999997 999999999999999999999999 9
Q ss_pred hcC-CcCCCceEEeCC
Q 023033 265 SNH-FYLYLHSIYSLN 279 (288)
Q Consensus 265 TnG-~~s~~HRV~~~~ 279 (288)
||| ||||+|||++++
T Consensus 222 Tng~~kS~~HRVv~~~ 237 (280)
T 3on7_A 222 SDGYFPSTSHRVINPE 237 (280)
T ss_dssp TTTSSCCCCEEEECCT
T ss_pred hCCcccCCCceEeCCC
Confidence 999 999999999874
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=83.98 E-value=4.6 Score=33.91 Aligned_cols=84 Identities=18% Similarity=0.132 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHcCCCHHHHHHhccccCCCcceeEeeccCCCCCCCCccCCCCccccC-----------ceEEEEc--C--
Q 023033 165 ANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHG-----------LLTILMQ--N-- 229 (288)
Q Consensus 165 a~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q--~-- 229 (288)
+..|.+.|...|+..+.++...+ . ....-+++++|.+. --..+|.|.. .+|+++. +
T Consensus 72 ~~~l~~~i~~~l~~~~~f~~~~L--~-~~~e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~ 142 (243)
T 3dkq_A 72 AVALGQQIMDRLLAHPQFVSAAL--P-LQFYPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPE 142 (243)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHC--E-EEEEEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGG
T ss_pred HHHHHHHHHHHHccCcchhhccc--c-cccccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCC
Confidence 34444555555666554444333 2 22344889999753 1246677753 4666664 3
Q ss_pred --CCCCeEEeeCCeeEeecCCCCcEEEEec
Q 023033 230 --DHVGLHVRHDGKWIPVNPPPGSFVVNIG 257 (288)
Q Consensus 230 --~~~GLqv~~~g~W~~V~~~~~~~vVn~G 257 (288)
..|.|.+.....=..|+|..|.+|+.-.
T Consensus 143 ~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 143 NYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp GEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred CCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 1245777664334679999999998643
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=80.13 E-value=23 Score=29.48 Aligned_cols=37 Identities=11% Similarity=0.071 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH
Q 023033 56 KTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF 93 (288)
Q Consensus 56 ~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 93 (288)
.....+..++.+.|++++.|- ++++.++.+.+.++.+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 345678899999999887654 8999999998887763
No 9
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=58.07 E-value=4.7 Score=36.20 Aligned_cols=52 Identities=12% Similarity=0.061 Sum_probs=39.1
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhcC
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDL 96 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 96 (288)
++|.||++.+.. |+ +...++.+++.++|++.+.+-.++.+. ..+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~-~d----~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR-YD----EHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH-CH----HHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhc-CH----HHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 689999988763 22 567889999999999999998887543 34556666443
No 10
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=53.10 E-value=8.1 Score=35.40 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=39.1
Q ss_pred CCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHHhc
Q 023033 35 AETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFD 95 (288)
Q Consensus 35 ~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 95 (288)
..-||.|||+++.++. +.++..+.+++.|++.|.|. ||.+...+..+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 3569999999875432 12345567789999988765 898888777777777753
No 11
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=49.26 E-value=19 Score=19.64 Aligned_cols=18 Identities=28% Similarity=0.501 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHhcceEEE
Q 023033 56 KTIQAIGNACLKWGFFEV 73 (288)
Q Consensus 56 ~~~~~l~~A~~~~GFf~l 73 (288)
++++.|.-.|.+-||||-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 678889999999999983
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=46.91 E-value=41 Score=27.20 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=42.7
Q ss_pred eEeeccCCCCCCCCccCCCCcccc--------------CceEEEEc--C-CC-CCeEEeeCC-------------eeEee
Q 023033 197 LVVNLYPPCPQPEVVMGLPPHSDH--------------GLLTILMQ--N-DH-VGLHVRHDG-------------KWIPV 245 (288)
Q Consensus 197 lrl~~Yp~~~~~~~~~~~~~HtD~--------------~~lTlL~q--~-~~-~GLqv~~~g-------------~W~~V 245 (288)
+++++|.+.. ...+|.|+ ..+|+|+. | .. |.+.+...+ .-+.|
T Consensus 100 ~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V 173 (224)
T 2jig_A 100 LQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAV 173 (224)
T ss_dssp CEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEE
T ss_pred eEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEE
Confidence 7788887521 24566664 25788864 2 22 335443321 24789
Q ss_pred cCCCCcEEEEechhhhHHhhcC--CcCCCceEEeC
Q 023033 246 NPPPGSFVVNIGDHMEVILSNH--FYLYLHSIYSL 278 (288)
Q Consensus 246 ~~~~~~~vVn~Gd~l~~~~TnG--~~s~~HRV~~~ 278 (288)
+|..|.+|+.-- . ..+| =..++|+|...
T Consensus 174 ~P~~G~al~f~~----~-~~~g~~d~~~lH~~~PV 203 (224)
T 2jig_A 174 KPIKGDALMFYS----L-KPDGSNDPASLHGSCPT 203 (224)
T ss_dssp CCCTTCEEEEES----B-CTTSCBCGGGCEEECCE
T ss_pred ecccCcEEEEEe----e-CCCCCCCCCCcccCCcc
Confidence 999999888653 2 3345 46789998654
No 13
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=46.17 E-value=18 Score=30.45 Aligned_cols=49 Identities=12% Similarity=0.130 Sum_probs=35.5
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH
Q 023033 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF 93 (288)
Q Consensus 36 ~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 93 (288)
++|+-||++... ++ +..++|.+++.++|++.+.+-.++.+. ..+.++.|
T Consensus 16 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~ 64 (283)
T 1otj_A 16 AQISGADLTRPL--SD----NQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRF 64 (283)
T ss_dssp EEEESCCSSSCC--CH----HHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTT
T ss_pred EEEECCCcCccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 467778998854 33 457889999999999999988776543 33445554
No 14
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=45.58 E-value=55 Score=26.62 Aligned_cols=70 Identities=23% Similarity=0.142 Sum_probs=41.3
Q ss_pred eeEeeccCCCCCCCCccCCCCccccC-----------ceEEEEc-CC--CCC-eEEeeCCeeEeecCCCCcEEEEechhh
Q 023033 196 LLVVNLYPPCPQPEVVMGLPPHSDHG-----------LLTILMQ-ND--HVG-LHVRHDGKWIPVNPPPGSFVVNIGDHM 260 (288)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q-~~--~~G-Lqv~~~g~W~~V~~~~~~~vVn~Gd~l 260 (288)
.+++++|.+.. -..+|.|+. .+|+++. ++ .|| +.....+ +.|+|..|.+++.-.
T Consensus 112 ~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~--~~V~P~~G~al~f~~--- 180 (216)
T 3itq_A 112 GLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLN--LSVHPRKGMAVYFEY--- 180 (216)
T ss_dssp CCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTT--EEECCCTTCEEEEEC---
T ss_pred ceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCC--CEEecCCCeEEEEec---
Confidence 37788897522 235676653 4788875 22 233 4332222 779999999888653
Q ss_pred hHHhhcC--CcCCCceEEeC
Q 023033 261 EVILSNH--FYLYLHSIYSL 278 (288)
Q Consensus 261 ~~~~TnG--~~s~~HRV~~~ 278 (288)
. ..+| =..++|+|...
T Consensus 181 -~-~~~g~~d~~~lH~~~PV 198 (216)
T 3itq_A 181 -F-YQDQSLNELTLHGGAPV 198 (216)
T ss_dssp -C-CSSHHHHHTTCEEECCE
T ss_pred -c-CCCCCCCCcccccccee
Confidence 1 2233 34578887643
No 15
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=43.53 E-value=39 Score=29.45 Aligned_cols=47 Identities=15% Similarity=0.108 Sum_probs=33.0
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh----HHHHHHHHHHHHHhc
Q 023033 46 LTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN----TLRDEMIRASESFFD 95 (288)
Q Consensus 46 l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~----~~~~~~~~~~~~fF~ 95 (288)
|..++++ +..+++.+.++.-||..=.+|||+. +-++.+.+++++|++
T Consensus 298 l~~g~~e---~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVD---KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHH---HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHH---HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4456654 3344555666677887667899754 788999999999975
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=41.42 E-value=36 Score=29.97 Aligned_cols=64 Identities=25% Similarity=0.509 Sum_probs=45.1
Q ss_pred eeEeeccCCCCCCCCccCCCCccccC------ceEEEEcCCCCCeEEee-CCeeEeecCCCCcEEEEechhhhHHhhcC
Q 023033 196 LLVVNLYPPCPQPEVVMGLPPHSDHG------LLTILMQNDHVGLHVRH-DGKWIPVNPPPGSFVVNIGDHMEVILSNH 267 (288)
Q Consensus 196 ~lrl~~Yp~~~~~~~~~~~~~HtD~~------~lTlL~q~~~~GLqv~~-~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG 267 (288)
.+-+|+|.+ + -++++|.|-. +.|+-+- ...-+.+.. ++.++.+...+|+++|.-|++=.. |.-|
T Consensus 199 ~~lvN~Y~~-----G-~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~-w~H~ 269 (345)
T 3tht_A 199 QMTINQYEP-----G-QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYL-WTHG 269 (345)
T ss_dssp EEEEEEECT-----T-CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHT-SEEE
T ss_pred EEEEEEecC-----C-CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhc-eEcc
Confidence 456899975 1 2788999874 3344341 222344444 677899999999999999999888 8766
No 17
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.98 E-value=29 Score=29.53 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=36.4
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCC-CChHHHHHHHHHHHHHhc
Q 023033 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHG-VPNTLRDEMIRASESFFD 95 (288)
Q Consensus 36 ~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhg-i~~~~~~~~~~~~~~fF~ 95 (288)
++|+-||++... ++ +..++|.+++.++|++.+.+-. ++. ++..+.++.|=.
T Consensus 26 aei~gvdl~~~l--~~----~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDL--DA----ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 457778888754 33 4578899999999999998877 775 344555565543
No 18
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=38.70 E-value=20 Score=29.07 Aligned_cols=49 Identities=29% Similarity=0.363 Sum_probs=33.8
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHH
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASE 91 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~--~~~~~~~~~~~ 91 (288)
.||++++... +++ ++++.+.+++.+.-.+.|.|||+=. +.+++++..+.
T Consensus 125 ~v~~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~~~G~t~~eA~~~~~ 175 (212)
T 2opi_A 125 EIPVIPYYRP--GSP----ELAKAVVEAMLKHNSVLLTNHGQVVCGKDFDQVYERAT 175 (212)
T ss_dssp CCCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CeEEEcCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcEEEcCCHHHHHHHHH
Confidence 6899988654 344 6778888999888889999999522 33444444443
No 19
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.17 E-value=16 Score=24.37 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=32.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhc
Q 023033 149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAM 187 (288)
Q Consensus 149 ~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~ 187 (288)
+-+..++.||..-.+-...-+..||..+||+.+.....|
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 457788999998888888889999999999998766655
No 20
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=35.54 E-value=39 Score=27.04 Aligned_cols=51 Identities=10% Similarity=0.123 Sum_probs=35.5
Q ss_pred CCcee-ecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCC---C-----hHHHHHHHHHHHHH
Q 023033 37 TIPII-DFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGV---P-----NTLRDEMIRASESF 93 (288)
Q Consensus 37 ~iPvI-Dls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi---~-----~~~~~~~~~~~~~f 93 (288)
.||++ ++... +++ ++++.+.+++.+.-.+.|.|||+ . .+.+++++..+..+
T Consensus 117 ~ip~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATE----EAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCS--SSH----HHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC--CcH----HHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 68999 77543 244 67778888888888899999994 2 14566666655543
No 21
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=35.35 E-value=31 Score=21.25 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=15.2
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444333223555666666666666654
No 22
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=34.26 E-value=33 Score=21.06 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=16.1
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444333333555666666666666665
No 23
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=33.89 E-value=1.8e+02 Score=23.32 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=39.4
Q ss_pred eEeeccCCCCCCCCccCCCCcccc-----C--ceEEEEcCCCCCeEEee---CCeeEeecCCCCcEEEEechhhhHHhhc
Q 023033 197 LVVNLYPPCPQPEVVMGLPPHSDH-----G--LLTILMQNDHVGLHVRH---DGKWIPVNPPPGSFVVNIGDHMEVILSN 266 (288)
Q Consensus 197 lrl~~Yp~~~~~~~~~~~~~HtD~-----~--~lTlL~q~~~~GLqv~~---~g~W~~V~~~~~~~vVn~Gd~l~~~~Tn 266 (288)
.-+|+|.+ +. ++++|.|- + ++|+-+- ...-+.+.. .+....+...+|.++|.-|++ +. |--
T Consensus 107 ~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~-~~H 177 (211)
T 3i3q_A 107 CLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RL-FYH 177 (211)
T ss_dssp EEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TT-CCE
T ss_pred EEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchH-Hc-eEe
Confidence 45899975 23 78899982 2 3344442 112333432 356888999999999999987 45 543
Q ss_pred C
Q 023033 267 H 267 (288)
Q Consensus 267 G 267 (288)
|
T Consensus 178 ~ 178 (211)
T 3i3q_A 178 G 178 (211)
T ss_dssp E
T ss_pred c
Confidence 3
No 24
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=33.81 E-value=48 Score=20.67 Aligned_cols=28 Identities=4% Similarity=0.084 Sum_probs=17.4
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|+|.+.- ...++++++++++.|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 5555544 334666777777777777665
No 25
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=32.42 E-value=31 Score=28.39 Aligned_cols=51 Identities=18% Similarity=0.046 Sum_probs=35.8
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHHH
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASESF 93 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~--~~~~~~~~~~~~f 93 (288)
.||++++... +++ ++++++.+++.+.-.+.+.|||+=. +.+++++..+..+
T Consensus 161 ~v~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~l 213 (238)
T 1pvt_A 161 GISVVEFEKP--GSV----ELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEIL 213 (238)
T ss_dssp CCEEECCCST--TCH----HHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHHH
T ss_pred CceEecCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHHH
Confidence 6899988643 344 6778888899888889999999622 3455555555443
No 26
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=31.38 E-value=29 Score=28.06 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=33.3
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHH
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASE 91 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~--~~~~~~~~~~~ 91 (288)
.||++++... +++ ++++.+.+++.+.-.+.|.|||+=. +.+++++..+.
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 172 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAH 172 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCcEEEeCCHHHHHHHHH
Confidence 6899888654 343 6778888999888889999999522 23444444333
No 27
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=31.33 E-value=38 Score=28.55 Aligned_cols=49 Identities=20% Similarity=0.173 Sum_probs=36.1
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChHHHHHHHHHHHHH
Q 023033 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESF 93 (288)
Q Consensus 36 ~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f 93 (288)
++|.=|||+... ++ +..++|.+|+.++|.+.+.+-.++.+. ..+.++.|
T Consensus 14 aei~gvdl~~~l--~~----~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~f 62 (277)
T 3pvj_A 14 AQISGVDISRDI--SA----EERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARF 62 (277)
T ss_dssp EEEESCCTTSCC--CH----HHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGG
T ss_pred EEEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 467778998744 33 567889999999999999988887643 34455555
No 28
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=31.33 E-value=50 Score=28.29 Aligned_cols=51 Identities=8% Similarity=0.030 Sum_probs=36.9
Q ss_pred CCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeC-CCChHHHHHHHHHHHHHhc
Q 023033 36 ETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINH-GVPNTLRDEMIRASESFFD 95 (288)
Q Consensus 36 ~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~fF~ 95 (288)
++|+-|||+... ++ +..++|..|+.++|.+.+.+- .++.+ +..+.++.|=.
T Consensus 20 aei~gvdl~~~L--~d----~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~ 71 (301)
T 3r1j_A 20 ARVDGVRLGGDL--DD----ATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGT 71 (301)
T ss_dssp EEEESCCCSTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSC
T ss_pred ceEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCC
Confidence 467778998533 33 567889999999999999988 77764 33456666643
No 29
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=31.04 E-value=1.2e+02 Score=24.93 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=41.6
Q ss_pred eEeeccCCCCCCCCccCCCCcccc--------CceEEEEcCCCCCeEEee-C----------CeeEeecCCCCcEEEEec
Q 023033 197 LVVNLYPPCPQPEVVMGLPPHSDH--------GLLTILMQNDHVGLHVRH-D----------GKWIPVNPPPGSFVVNIG 257 (288)
Q Consensus 197 lrl~~Yp~~~~~~~~~~~~~HtD~--------~~lTlL~q~~~~GLqv~~-~----------g~W~~V~~~~~~~vVn~G 257 (288)
+-+|+|++. .-++++|.|- .+.||-+-.. .=+.+.. . +..+.++..+|.++|.-|
T Consensus 128 ~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G 201 (238)
T 2iuw_A 128 LLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEG 201 (238)
T ss_dssp EEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEEE
T ss_pred EEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEECh
Confidence 468999752 2368888884 2334433211 2233332 1 468899999999999999
Q ss_pred hhhhHHhhcC
Q 023033 258 DHMEVILSNH 267 (288)
Q Consensus 258 d~l~~~~TnG 267 (288)
++=.. |.-|
T Consensus 202 ~~r~~-w~H~ 210 (238)
T 2iuw_A 202 ATQAD-WQHR 210 (238)
T ss_dssp THHHH-EEEE
T ss_pred hhhCc-cEec
Confidence 98777 7666
No 30
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=30.21 E-value=72 Score=23.25 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=26.2
Q ss_pred eeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCChH
Q 023033 40 IIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNT 81 (288)
Q Consensus 40 vIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~~ 81 (288)
|||++.+.. . .....|.+.|+++|+..+--.|.+++
T Consensus 51 VlDl~~l~~--~----~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLES--P----VNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCS--S----CCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCC--h----HHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 569988752 2 12567889999999999877776544
No 31
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=29.67 E-value=41 Score=20.54 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=19.0
Q ss_pred CceeecCCCCCCChhHHHHHHHHHHHHHHhc
Q 023033 38 IPIIDFSMLTSGSPEQRYKTIQAIGNACLKW 68 (288)
Q Consensus 38 iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~ 68 (288)
.|.|.+.-+..-+++++++++++|.+++.+.
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~ 33 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKT 33 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4666665443335556777777777777653
No 32
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=28.47 E-value=66 Score=26.58 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhcceEEEEeC-CCChHHHHHHHHHHHH
Q 023033 53 QRYKTIQAIGNACLKWGFFEVINH-GVPNTLRDEMIRASES 92 (288)
Q Consensus 53 ~r~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 92 (288)
.+.++.+.+.+||.+.|| ++.-. ||+.+-..++.+.+.+
T Consensus 171 ~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 345788999999999999 77765 6999888887776654
No 33
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=28.15 E-value=96 Score=25.09 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHhcceEEEEe-CCCChHHHHHHHHHHH
Q 023033 52 EQRYKTIQAIGNACLKWGFFEVIN-HGVPNTLRDEMIRASE 91 (288)
Q Consensus 52 ~~r~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~~ 91 (288)
+.+.+..++|.+.+.++..++|.+ +|++...++++....+
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 456678888999999887777776 6888877777666555
No 34
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=27.78 E-value=2.3e+02 Score=22.62 Aligned_cols=29 Identities=14% Similarity=0.094 Sum_probs=21.4
Q ss_pred CeeEeecCCCCcEEEEechhhhHHhhcCCcCCCceEEeCCc
Q 023033 240 GKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNV 280 (288)
Q Consensus 240 g~W~~V~~~~~~~vVn~Gd~l~~~~TnG~~s~~HRV~~~~~ 280 (288)
..+..|+|.+|.+||.-+. . .|+|.....
T Consensus 166 ~~~~~i~P~~G~lvlFpS~---l---------~H~V~p~~~ 194 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW---L---------RHEVPMNMA 194 (216)
T ss_dssp CSEEEECCCTTEEEEEETT---S---------CEEECCCCS
T ss_pred CCeeEecCCCCeEEEECCC---C---------EEeccCCCC
Confidence 4567899999999998765 3 677766544
No 35
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=27.12 E-value=51 Score=20.70 Aligned_cols=29 Identities=24% Similarity=0.373 Sum_probs=17.1
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|.|.+.-+...++++++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444333333566677777777777765
No 36
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=26.59 E-value=48 Score=20.51 Aligned_cols=29 Identities=10% Similarity=0.383 Sum_probs=18.0
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|.|.+.-....+++++++++++|.+++.+
T Consensus 2 P~i~i~~~~g~s~eqk~~l~~~lt~~l~~ 30 (64)
T 3abf_A 2 VVLKVTLLEGRPPEKKRELVRRLTEMASR 30 (64)
T ss_dssp EEEEEEEETTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 55555533333565677777777777765
No 37
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=26.54 E-value=70 Score=26.76 Aligned_cols=39 Identities=18% Similarity=0.357 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhcceEEEEeC-CCChHHHHHHHHHHHH
Q 023033 53 QRYKTIQAIGNACLKWGFFEVINH-GVPNTLRDEMIRASES 92 (288)
Q Consensus 53 ~r~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~ 92 (288)
.+.++.+.+.+||.+.|| .+.-. ||+.+-..++.+.+.+
T Consensus 194 ~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 194 AHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIALE 233 (275)
T ss_dssp TTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHHH
Confidence 345788999999999999 77765 6999888887776544
No 38
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=25.55 E-value=1.7e+02 Score=22.67 Aligned_cols=39 Identities=13% Similarity=0.230 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhcc-eEEEEe-CCCChHHHHHHHHHHH
Q 023033 53 QRYKTIQAIGNACLKWG-FFEVIN-HGVPNTLRDEMIRASE 91 (288)
Q Consensus 53 ~r~~~~~~l~~A~~~~G-Ff~l~n-hgi~~~~~~~~~~~~~ 91 (288)
.+...+++|.+.++++. .+++.+ +|++.+.+.++....+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 45677888999999888 666655 5888877777666555
No 39
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=25.47 E-value=58 Score=27.40 Aligned_cols=52 Identities=21% Similarity=0.268 Sum_probs=34.4
Q ss_pred CCceeecCC-------CCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHH
Q 023033 37 TIPIIDFSM-------LTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASES 92 (288)
Q Consensus 37 ~iPvIDls~-------l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~--~~~~~~~~~~~~ 92 (288)
.||++++.. ...+++ ++++.+.+++.+.-.+.|.|||+=. +.+++++..+..
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~----ela~~ia~~l~~~~avLL~nHG~~~~G~tl~eA~~~~~~ 217 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSP----DVCADIAESLGSQTVVLMARHGVVNVGKSVREVVFRAFY 217 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSH----HHHHHHHHHHTTSSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCceecccccCCcccccccCCH----HHHHHHHHHhccCCEEEEcCCceEEEeCCHHHHHHHHHH
Confidence 589988631 122344 6778888889888889999999522 345555554444
No 40
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=25.45 E-value=39 Score=28.52 Aligned_cols=51 Identities=20% Similarity=0.150 Sum_probs=35.7
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHHH
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASESF 93 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~--~~~~~~~~~~~~f 93 (288)
.||++++... ++. ++++.+.+++.+.-.+.+.|||+=. +.+++++..+..+
T Consensus 179 ~v~v~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~l 231 (274)
T 2v9l_A 179 GVGILPWMVP--GTD----AIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTA 231 (274)
T ss_dssp CEEECCCCCS--SSH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHHH
T ss_pred ceeEecCCCC--CCH----HHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHHH
Confidence 5888887543 344 6788889999988899999999622 3455555555443
No 41
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=25.16 E-value=1.6e+02 Score=22.89 Aligned_cols=41 Identities=10% Similarity=0.059 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHHhcceEEEEe-CCCChHHHHHHHHHHHH
Q 023033 52 EQRYKTIQAIGNACLKWGFFEVIN-HGVPNTLRDEMIRASES 92 (288)
Q Consensus 52 ~~r~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~~~ 92 (288)
+.+...+++|.+.++++..+++.+ +|++...+.++....++
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 356678889999999988888876 58988877777766654
No 42
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=24.76 E-value=68 Score=20.92 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=28.1
Q ss_pred ceeecCCCCCC-ChhHHHHHHHHHHHHHHhc-c----eEEEEeCCCChHHH
Q 023033 39 PIIDFSMLTSG-SPEQRYKTIQAIGNACLKW-G----FFEVINHGVPNTLR 83 (288)
Q Consensus 39 PvIDls~l~~~-d~~~r~~~~~~l~~A~~~~-G----Ff~l~nhgi~~~~~ 83 (288)
|.|.+.-+... ++++++++++.|.+++.+. | -+++.-+.++.+..
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip~~~v~V~i~e~~~~~w 51 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESW 51 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECCGGGH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcCCceEEEEEEEeChHHE
Confidence 55555433334 6778888899999888864 3 44555455555443
No 43
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=24.68 E-value=34 Score=27.41 Aligned_cols=50 Identities=18% Similarity=0.165 Sum_probs=33.0
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcc---eEEEEeCCCCh--HHHHHHHHHHHHH
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWG---FFEVINHGVPN--TLRDEMIRASESF 93 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~G---Ff~l~nhgi~~--~~~~~~~~~~~~f 93 (288)
.||+++.. .+. .++++.+.+++.+.+ .+.|.|||+=. +.+++++..+..+
T Consensus 139 ~vp~~~~~---~g~----~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~l 193 (208)
T 2irp_A 139 KIPIFPNE---QNI----PLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEAL 193 (208)
T ss_dssp EEEEECCC---SCH----HHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHHH
T ss_pred ceeeecCC---CCH----HHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHHH
Confidence 58887763 222 367888888888765 78899999522 3455656555443
No 44
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=24.00 E-value=64 Score=20.39 Aligned_cols=18 Identities=22% Similarity=0.425 Sum_probs=11.4
Q ss_pred ChhHHHHHHHHHHHHHHh
Q 023033 50 SPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 50 d~~~r~~~~~~l~~A~~~ 67 (288)
++++++++++.|.+++.+
T Consensus 15 s~eqK~~l~~~lt~~l~~ 32 (67)
T 3m21_A 15 TNEQKQQLIEGVSDLMVK 32 (67)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 555666666666666654
No 45
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=23.83 E-value=54 Score=21.12 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=16.4
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|+|.+.-+...++++++++++.|.+++.+
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~ 30 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAA 30 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55555433333555666666666666654
No 46
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=22.23 E-value=1.1e+02 Score=17.88 Aligned_cols=38 Identities=24% Similarity=0.497 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhc
Q 023033 150 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAM 187 (288)
Q Consensus 150 f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~ 187 (288)
....+.+|.+.-.++...-+.-.++-||+....+..++
T Consensus 8 verklkefvrrhqeitqetlheyaqklglnqqaieqff 45 (52)
T 1y66_A 8 VERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFF 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 34567888888999999999999999999876555544
No 47
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=21.65 E-value=51 Score=17.26 Aligned_cols=13 Identities=31% Similarity=0.675 Sum_probs=9.7
Q ss_pred eEEeeCCeeEeec
Q 023033 234 LHVRHDGKWIPVN 246 (288)
Q Consensus 234 Lqv~~~g~W~~V~ 246 (288)
.-|+.+|.|+..+
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4567799999764
No 48
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=21.44 E-value=62 Score=27.31 Aligned_cols=52 Identities=8% Similarity=0.056 Sum_probs=35.5
Q ss_pred CCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCCCCh--HHHHHHHHHHHHH
Q 023033 37 TIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPN--TLRDEMIRASESF 93 (288)
Q Consensus 37 ~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhgi~~--~~~~~~~~~~~~f 93 (288)
.||++++..+. .+. ++++.+.+++.+.-.+.|.|||+=. +.+++++..+..+
T Consensus 156 ~v~~~~y~~~~-~~~----el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~~l 209 (273)
T 3ocr_A 156 RVAYHGYEGIA-LDL----SERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLHAL 209 (273)
T ss_dssp TEEEECCCCSS-CCH----HHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCCCCC-CCH----HHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHHHH
Confidence 58888887542 133 5677888889999999999999532 3455555554443
No 49
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.13 E-value=1.1e+02 Score=19.15 Aligned_cols=30 Identities=17% Similarity=0.374 Sum_probs=22.1
Q ss_pred HHHHHHHHHhcceEEEEeCCCChHHHHHHHHHH
Q 023033 58 IQAIGNACLKWGFFEVINHGVPNTLRDEMIRAS 90 (288)
Q Consensus 58 ~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~ 90 (288)
+.+|.+.|+..| |.-.|--.++++++.+..
T Consensus 15 V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l 44 (55)
T 2do1_A 15 LAELKQECLARG---LETKGIKQDLIHRLQAYL 44 (55)
T ss_dssp HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHH
Confidence 677889999999 445677677887766543
No 50
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=20.35 E-value=78 Score=20.72 Aligned_cols=29 Identities=17% Similarity=0.180 Sum_probs=16.4
Q ss_pred ceeecCCCCCCChhHHHHHHHHHHHHHHh
Q 023033 39 PIIDFSMLTSGSPEQRYKTIQAIGNACLK 67 (288)
Q Consensus 39 PvIDls~l~~~d~~~r~~~~~~l~~A~~~ 67 (288)
|+|.+.-+...++++++++++.|.+++.+
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~ 30 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISE 30 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55555433333555666666666666654
Done!