BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023034
MATIVSSSSFFSVSLPGRLGNSRRCSVKPNPSPIFIRKFVAKIRASSTAFVETKPSEPSF
VENEASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAA
SGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGN
IIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS
RLPFASSSIDAVHAGAAIHCWSSPSTGVGVFFQVTLIIHVVEDLAVSF

High Scoring Gene Products

Symbol, full name Information P value
AT1G78140 protein from Arabidopsis thaliana 4.0e-74
AT2G41040 protein from Arabidopsis thaliana 7.0e-54
BA_2890
methyltransferase, UbiE/COQ5 family
protein from Bacillus anthracis str. Ames 0.00047
CPS_1006
Putative uncharacterized protein
protein from Colwellia psychrerythraea 34H 0.00098
CPS_1006
hypothetical protein
protein from Colwellia psychrerythraea 34H 0.00098

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023034
        (288 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2194759 - symbol:AT1G78140 species:3702 "Arabi...   748  4.0e-74   1
TAIR|locus:2063218 - symbol:AT2G41040 species:3702 "Arabi...   557  7.0e-54   1
TIGR_CMR|BA_2890 - symbol:BA_2890 "methyltransferase, Ubi...   111  0.00047   1
UNIPROTKB|Q487L0 - symbol:CPS_1006 "Putative uncharacteri...   108  0.00098   1
TIGR_CMR|CPS_1006 - symbol:CPS_1006 "hypothetical protein...   108  0.00098   1


>TAIR|locus:2194759 [details] [associations]
            symbol:AT1G78140 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010287 "plastoglobule"
            evidence=IDA] InterPro:IPR013216 Pfam:PF08241 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008168 GO:GO:0010287 EMBL:AC012680
            eggNOG:COG2226 EMBL:BT004985 EMBL:BT004126 EMBL:AY086976
            IPI:IPI00547634 PIR:F96810 RefSeq:NP_565170.1 UniGene:At.18013
            UniGene:At.71185 ProteinModelPortal:Q8LBV4 SMR:Q8LBV4 IntAct:Q8LBV4
            PaxDb:Q8LBV4 PRIDE:Q8LBV4 EnsemblPlants:AT1G78140.1 GeneID:844150
            KEGG:ath:AT1G78140 TAIR:At1g78140 HOGENOM:HOG000006413
            InParanoid:Q8LBV4 OMA:WRQNFIW PhylomeDB:Q8LBV4
            ProtClustDB:CLSN2917480 Genevestigator:Q8LBV4 Uniprot:Q8LBV4
        Length = 355

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 146/244 (59%), Positives = 174/244 (71%)

Query:    39 FVAK-IRASSTAF-VETKP-SEPSFV---ENEASTSKNVLACPICYKPLTWIGD-XXXXX 91
             FV++   ASS +  VET   S   FV   +++    K +LACPICY  L WI        
Sbjct:    37 FVSRSAHASSASVSVETNSNSNVDFVIEKKDKNRGEKKILACPICYNSLAWISQPNGLIE 96

Query:    92 XXXXXXXXQCNTCKKTYSGVGTHFDMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWR 151
                     QCNTCK++YSG  TH D+  ASGSK Y E M  +TE FR P +SF+YERGWR
Sbjct:    97 SAASGIQVQCNTCKRSYSGNETHLDLAVASGSKRYSEPMPLSTELFRTPLVSFLYERGWR 156

Query:   152 QNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE 211
             QNF+WGGFPGPEKEFE+ K YLKPVLGGNIIDASCGSG+FSR+F +S LFSLV+ALDYSE
Sbjct:   157 QNFIWGGFPGPEKEFEMAKAYLKPVLGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSE 216

Query:   212 NMLKQCYEFVQQESNFP-KENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVGV 270
             NML+QCYE + +E NFP KE  +LVRADI+RLPF S S+DAVHAGAA+HCW SPS+ V  
Sbjct:   217 NMLRQCYELLNKEENFPNKEKLVLVRADIARLPFLSGSVDAVHAGAALHCWPSPSSAVAE 276

Query:   271 FFQV 274
               +V
Sbjct:   277 ISRV 280


>TAIR|locus:2063218 [details] [associations]
            symbol:AT2G41040 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010287 "plastoglobule"
            evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
            InterPro:IPR013216 Pfam:PF08241 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0080167 EMBL:AC004261 GO:GO:0008168
            GO:GO:0010287 eggNOG:COG2226 HOGENOM:HOG000006413 EMBL:AK228973
            IPI:IPI00521340 PIR:T02115 RefSeq:NP_181637.2 UniGene:At.12544
            UniGene:At.42876 ProteinModelPortal:Q0WPT7 SMR:Q0WPT7 PaxDb:Q0WPT7
            PRIDE:Q0WPT7 EnsemblPlants:AT2G41040.1 GeneID:818703
            KEGG:ath:AT2G41040 GeneFarm:3102 TAIR:At2g41040 InParanoid:Q0WPT7
            OMA:KPARTEL PhylomeDB:Q0WPT7 ProtClustDB:CLSN2680171
            Genevestigator:Q0WPT7 Uniprot:Q0WPT7
        Length = 352

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 102/205 (49%), Positives = 132/205 (64%)

Query:    71 VLACPICYKPLTWIGDXXXXXXXXXXXXXQCNTCKKTYSGVGTHFDMTAASGSKDYGELM 130
             V ACP+CY+PL   G              +C  C KTYS    + D+T  +   DY E+ 
Sbjct:    78 VFACPVCYEPLMRKGPSGINLQAIYRSGFKCGQCNKTYSSKDEYLDLTVTADLDDYNEVK 137

Query:   131 SPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGL 190
                TE FR P +SF+YERGWRQ F   GFPGP++EF + + Y K   GG ++D SCGSGL
Sbjct:   138 PITTELFRSPLVSFLYERGWRQAFKRSGFPGPDEEFRMAEEYFKEAEGGLLVDVSCGSGL 197

Query:   191 FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE-NFLLVRADISRLPFASSSI 249
             FSR FA+SG +S V+ALDYSENML+QC EF++ ++ F    N  +VRAD+SRLPF S S+
Sbjct:   198 FSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTFDNSTNIAVVRADVSRLPFPSGSV 257

Query:   250 DAVHAGAAIHCWSSPSTGVGVFFQV 274
             DAVHAGAA+HCW SP+  +    +V
Sbjct:   258 DAVHAGAALHCWPSPTNAIAEICRV 282


>TIGR_CMR|BA_2890 [details] [associations]
            symbol:BA_2890 "methyltransferase, UbiE/COQ5 family"
            species:198094 "Bacillus anthracis str. Ames" [GO:0008168
            "methyltransferase activity" evidence=ISS] [GO:0009108 "coenzyme
            biosynthetic process" evidence=ISS] InterPro:IPR013216 Pfam:PF08241
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008168
            HOGENOM:HOG000263425 OMA:GHASFTA RefSeq:NP_845230.1
            RefSeq:YP_019533.1 RefSeq:YP_028953.1 ProteinModelPortal:Q81PC1
            DNASU:1087470 EnsemblBacteria:EBBACT00000013019
            EnsemblBacteria:EBBACT00000014340 EnsemblBacteria:EBBACT00000019334
            GeneID:1087470 GeneID:2815855 GeneID:2851088 KEGG:ban:BA_2890
            KEGG:bar:GBAA_2890 KEGG:bat:BAS2695 ProtClustDB:CLSK873291
            BioCyc:BANT260799:GJAJ-2758-MONOMER
            BioCyc:BANT261594:GJ7F-2854-MONOMER Uniprot:Q81PC1
        Length = 258

 Score = 111 (44.1 bits), Expect = 0.00047, P = 0.00047
 Identities = 29/105 (27%), Positives = 53/105 (50%)

Query:   161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220
             GP+ ++ + +  ++      ++D + G G  + + A   LF  VVALD +E ML+   +F
Sbjct:    27 GPDLQYVVQQ--VESRHNNRLLDIATGGGHVANVLAP--LFKEVVALDLTEKMLENAKKF 82

Query:   221 VQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPS 265
             +    +   EN   V  +   LPF+ SS D +    A H +++P+
Sbjct:    83 IISNGH---ENVSFVAGNAESLPFSDSSFDTITCRIAAHHFTNPA 124


>UNIPROTKB|Q487L0 [details] [associations]
            symbol:CPS_1006 "Putative uncharacterized protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR003358 Pfam:PF02390 EMBL:CP000083
            GenomeReviews:CP000083_GR GO:GO:0036265 GO:GO:0008176
            RefSeq:YP_267755.1 ProteinModelPortal:Q487L0 STRING:Q487L0
            DNASU:3520444 GeneID:3520444 KEGG:cps:CPS_1006 PATRIC:21465289
            eggNOG:NOG70397 HOGENOM:HOG000219844 OMA:LYPNPWP
            ProtClustDB:CLSK932769 BioCyc:CPSY167879:GI48-1092-MONOMER
            Uniprot:Q487L0
        Length = 251

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query:   178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 237
             G  I+DA CG G  +RI AK    +LV+ +D S++ + +  E    +  F  EN+ LVRA
Sbjct:    76 GEIILDACCGVGQSTRILAKQNPQALVIGVDKSDHRINRNVEGFDVDDGFSAENYHLVRA 135

Query:   238 DIS 240
             D++
Sbjct:   136 DLN 138


>TIGR_CMR|CPS_1006 [details] [associations]
            symbol:CPS_1006 "hypothetical protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR003358
            Pfam:PF02390 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0036265
            GO:GO:0008176 RefSeq:YP_267755.1 ProteinModelPortal:Q487L0
            STRING:Q487L0 DNASU:3520444 GeneID:3520444 KEGG:cps:CPS_1006
            PATRIC:21465289 eggNOG:NOG70397 HOGENOM:HOG000219844 OMA:LYPNPWP
            ProtClustDB:CLSK932769 BioCyc:CPSY167879:GI48-1092-MONOMER
            Uniprot:Q487L0
        Length = 251

 Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query:   178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 237
             G  I+DA CG G  +RI AK    +LV+ +D S++ + +  E    +  F  EN+ LVRA
Sbjct:    76 GEIILDACCGVGQSTRILAKQNPQALVIGVDKSDHRINRNVEGFDVDDGFSAENYHLVRA 135

Query:   238 DIS 240
             D++
Sbjct:   136 DLN 138


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      288       265   0.00093  114 3  11 22  0.44    33
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  202 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.10u 0.16s 21.26t   Elapsed:  00:00:01
  Total cpu time:  21.10u 0.16s 21.26t   Elapsed:  00:00:01
  Start:  Sat May 11 07:50:57 2013   End:  Sat May 11 07:50:58 2013

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