Query 023034
Match_columns 288
No_of_seqs 347 out of 2742
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p91_A Ribosomal RNA large sub 99.8 2.4E-20 8.1E-25 163.2 15.3 180 72-286 3-189 (269)
2 1vl5_A Unknown conserved prote 99.7 8.1E-17 2.8E-21 140.0 12.8 107 167-278 27-143 (260)
3 4e2x_A TCAB9; kijanose, tetron 99.7 4.7E-18 1.6E-22 158.0 4.8 106 167-279 97-212 (416)
4 1xxl_A YCGJ protein; structura 99.7 6.8E-16 2.3E-20 132.7 13.4 107 167-278 11-127 (239)
5 2o57_A Putative sarcosine dime 99.7 1.4E-15 4.7E-20 134.7 15.7 109 166-278 67-190 (297)
6 4hg2_A Methyltransferase type 99.7 2.1E-16 7.1E-21 137.9 9.9 103 163-279 27-139 (257)
7 1nkv_A Hypothetical protein YJ 99.7 1.8E-15 6E-20 130.9 14.9 110 163-276 22-141 (256)
8 1pjz_A Thiopurine S-methyltran 99.6 4E-16 1.4E-20 131.1 9.8 93 170-264 15-117 (203)
9 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.1E-15 3.7E-20 133.6 12.8 99 176-278 69-181 (261)
10 3bus_A REBM, methyltransferase 99.6 2.3E-15 7.9E-20 131.5 14.3 109 167-278 51-169 (273)
11 3dh0_A SAM dependent methyltra 99.6 1.2E-15 4.2E-20 128.8 12.0 109 167-278 27-146 (219)
12 3kkz_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 130.1 14.4 112 162-277 30-152 (267)
13 3ujc_A Phosphoethanolamine N-m 99.6 1.1E-15 3.7E-20 132.6 11.0 112 163-280 41-164 (266)
14 3dlc_A Putative S-adenosyl-L-m 99.6 3.8E-15 1.3E-19 125.2 13.8 108 166-277 33-150 (219)
15 3dtn_A Putative methyltransfer 99.6 3.6E-15 1.2E-19 127.3 13.4 110 166-281 32-154 (234)
16 3f4k_A Putative methyltransfer 99.6 5.3E-15 1.8E-19 127.9 14.5 112 161-276 29-151 (257)
17 3ofk_A Nodulation protein S; N 99.6 1.4E-15 4.7E-20 128.3 10.5 107 167-281 41-160 (216)
18 3g5l_A Putative S-adenosylmeth 99.6 2E-15 6.7E-20 130.5 11.8 105 167-278 34-148 (253)
19 3mgg_A Methyltransferase; NYSG 99.6 3.6E-15 1.2E-19 130.6 12.8 107 168-277 28-144 (276)
20 4htf_A S-adenosylmethionine-de 99.6 1.3E-15 4.4E-20 134.2 9.9 108 168-280 60-178 (285)
21 3jwg_A HEN1, methyltransferase 99.6 2.2E-15 7.7E-20 127.4 11.0 111 167-278 19-143 (219)
22 3jwh_A HEN1; methyltransferase 99.6 3E-15 1E-19 126.5 11.4 101 167-268 19-124 (217)
23 2gb4_A Thiopurine S-methyltran 99.6 4.6E-15 1.6E-19 129.0 12.7 101 174-276 65-192 (252)
24 3ccf_A Cyclopropane-fatty-acyl 99.6 3.4E-15 1.2E-19 131.1 11.6 106 168-284 48-163 (279)
25 3l8d_A Methyltransferase; stru 99.6 3.4E-15 1.2E-19 127.9 11.1 103 167-279 45-157 (242)
26 3vc1_A Geranyl diphosphate 2-C 99.6 9.6E-15 3.3E-19 130.5 14.2 109 167-280 106-226 (312)
27 2p35_A Trans-aconitate 2-methy 99.6 5.9E-15 2E-19 127.6 12.4 103 167-278 23-135 (259)
28 3g5t_A Trans-aconitate 3-methy 99.6 1.3E-14 4.6E-19 128.6 14.1 112 163-277 23-151 (299)
29 3hnr_A Probable methyltransfer 99.6 3.9E-15 1.3E-19 125.8 10.1 103 168-280 36-150 (220)
30 2yqz_A Hypothetical protein TT 99.6 8.8E-15 3E-19 126.7 12.5 95 174-274 36-140 (263)
31 3ege_A Putative methyltransfer 99.6 3.9E-15 1.3E-19 129.7 10.0 103 166-279 23-134 (261)
32 2gs9_A Hypothetical protein TT 99.6 1.3E-14 4.4E-19 121.9 12.8 101 168-282 29-139 (211)
33 3h2b_A SAM-dependent methyltra 99.6 2.6E-15 8.8E-20 125.4 8.1 92 178-279 42-145 (203)
34 3hem_A Cyclopropane-fatty-acyl 99.6 2E-14 6.9E-19 127.7 14.3 110 166-281 61-189 (302)
35 2xvm_A Tellurite resistance pr 99.6 1.6E-14 5.5E-19 119.8 12.8 103 168-276 23-137 (199)
36 2p7i_A Hypothetical protein; p 99.6 6.4E-15 2.2E-19 126.2 10.7 97 177-283 42-149 (250)
37 3e05_A Precorrin-6Y C5,15-meth 99.6 3.4E-14 1.2E-18 118.9 14.8 119 162-286 25-153 (204)
38 3gu3_A Methyltransferase; alph 99.6 1.6E-14 5.6E-19 127.3 13.2 99 174-277 19-128 (284)
39 3bkw_A MLL3908 protein, S-aden 99.6 9.8E-15 3.4E-19 124.9 11.0 105 167-278 33-147 (243)
40 3sm3_A SAM-dependent methyltra 99.6 2.1E-14 7.1E-19 122.0 12.1 106 169-279 24-145 (235)
41 3bkx_A SAM-dependent methyltra 99.6 1.3E-14 4.3E-19 126.9 10.7 110 167-278 33-162 (275)
42 2pxx_A Uncharacterized protein 99.6 3.8E-14 1.3E-18 118.8 13.0 108 166-281 33-165 (215)
43 3i9f_A Putative type 11 methyl 99.6 5.1E-15 1.7E-19 120.2 6.9 97 170-279 10-116 (170)
44 3lcc_A Putative methyl chlorid 99.5 2E-14 6.8E-19 122.9 10.9 107 166-278 56-174 (235)
45 3hm2_A Precorrin-6Y C5,15-meth 99.5 2.8E-14 9.6E-19 116.3 11.3 118 166-286 14-138 (178)
46 3ou2_A SAM-dependent methyltra 99.5 3E-14 1E-18 119.8 11.4 101 168-278 36-149 (218)
47 3dli_A Methyltransferase; PSI- 99.5 1.2E-14 4.1E-19 124.8 8.9 98 176-286 40-151 (240)
48 3thr_A Glycine N-methyltransfe 99.5 9.6E-15 3.3E-19 128.9 8.5 116 166-283 46-183 (293)
49 2p8j_A S-adenosylmethionine-de 99.5 2.4E-14 8.1E-19 119.8 10.5 97 176-278 22-131 (209)
50 2aot_A HMT, histamine N-methyl 99.5 1.8E-14 6E-19 127.6 10.1 102 176-279 51-176 (292)
51 1kpg_A CFA synthase;, cyclopro 99.5 7.1E-14 2.4E-18 123.0 13.6 108 167-280 54-173 (287)
52 1xtp_A LMAJ004091AAA; SGPP, st 99.5 2E-14 6.7E-19 124.0 9.6 104 167-276 83-198 (254)
53 3htx_A HEN1; HEN1, small RNA m 99.5 3.3E-14 1.1E-18 139.4 12.1 115 166-280 710-839 (950)
54 1ve3_A Hypothetical protein PH 99.5 5E-14 1.7E-18 119.3 11.7 103 167-277 30-144 (227)
55 1y8c_A S-adenosylmethionine-de 99.5 1.5E-14 5.3E-19 123.7 8.3 99 177-282 37-149 (246)
56 2ex4_A Adrenal gland protein A 99.5 3.5E-14 1.2E-18 121.9 10.5 97 177-277 79-187 (241)
57 3njr_A Precorrin-6Y methylase; 99.5 1.5E-13 5.3E-18 115.4 14.2 115 164-287 42-166 (204)
58 3lbf_A Protein-L-isoaspartate 99.5 1.1E-13 3.9E-18 116.1 13.3 107 166-277 66-176 (210)
59 1dus_A MJ0882; hypothetical pr 99.5 7.9E-14 2.7E-18 114.7 12.1 116 165-286 40-168 (194)
60 2fk8_A Methoxy mycolic acid sy 99.5 1.1E-13 3.8E-18 123.7 13.3 109 166-281 79-200 (318)
61 4fsd_A Arsenic methyltransfera 99.5 4.1E-14 1.4E-18 130.2 10.7 104 175-278 81-206 (383)
62 3m70_A Tellurite resistance pr 99.5 6.8E-14 2.3E-18 123.2 11.4 94 176-276 119-224 (286)
63 3e23_A Uncharacterized protein 99.5 4.5E-14 1.5E-18 118.6 9.3 99 166-278 34-144 (211)
64 3pfg_A N-methyltransferase; N, 99.5 1.1E-13 3.7E-18 120.3 11.2 89 177-276 50-152 (263)
65 3cc8_A Putative methyltransfer 99.5 1.5E-13 5E-18 116.3 11.8 103 168-283 24-138 (230)
66 3g2m_A PCZA361.24; SAM-depende 99.5 9.7E-14 3.3E-18 123.1 10.8 114 164-281 70-196 (299)
67 4azs_A Methyltransferase WBDD; 99.5 2.8E-14 9.5E-19 137.8 7.6 86 178-268 67-154 (569)
68 2yxd_A Probable cobalt-precorr 99.5 1.6E-13 5.4E-18 112.0 10.5 112 166-287 24-143 (183)
69 2pwy_A TRNA (adenine-N(1)-)-me 99.5 8.6E-13 2.9E-17 114.0 15.5 116 163-286 82-209 (258)
70 3fzg_A 16S rRNA methylase; met 99.5 7.2E-14 2.5E-18 115.2 8.1 104 166-276 40-152 (200)
71 2avn_A Ubiquinone/menaquinone 99.5 2.6E-13 8.9E-18 117.9 11.7 100 167-279 46-156 (260)
72 2kw5_A SLR1183 protein; struct 99.5 1.6E-13 5.5E-18 114.3 9.6 95 178-281 31-137 (202)
73 1yb2_A Hypothetical protein TA 99.5 7.1E-13 2.4E-17 116.3 14.1 111 167-286 100-222 (275)
74 3fpf_A Mtnas, putative unchara 99.5 4.3E-13 1.5E-17 118.4 12.5 98 171-276 116-223 (298)
75 3d2l_A SAM-dependent methyltra 99.5 1.7E-13 5.8E-18 117.2 9.7 106 167-282 25-144 (243)
76 3g07_A 7SK snRNA methylphospha 99.5 8.2E-14 2.8E-18 123.4 7.7 101 177-277 46-222 (292)
77 3ocj_A Putative exported prote 99.5 1.2E-13 4E-18 123.0 8.8 100 176-278 117-230 (305)
78 3mb5_A SAM-dependent methyltra 99.5 1.1E-12 3.8E-17 113.3 14.7 117 162-286 78-205 (255)
79 2vdw_A Vaccinia virus capping 99.5 2E-13 6.7E-18 121.7 9.9 104 177-282 48-176 (302)
80 1ri5_A MRNA capping enzyme; me 99.5 3.1E-13 1E-17 119.1 11.1 104 176-282 63-181 (298)
81 3grz_A L11 mtase, ribosomal pr 99.5 5.7E-13 1.9E-17 111.4 12.0 106 176-287 59-171 (205)
82 3cgg_A SAM-dependent methyltra 99.4 6.6E-13 2.2E-17 109.2 12.2 93 176-278 45-150 (195)
83 1vbf_A 231AA long hypothetical 99.4 6.6E-13 2.3E-17 113.0 12.3 106 166-278 59-168 (231)
84 2qe6_A Uncharacterized protein 99.4 5.6E-13 1.9E-17 117.2 12.0 107 168-279 67-200 (274)
85 1yzh_A TRNA (guanine-N(7)-)-me 99.4 7.6E-13 2.6E-17 111.6 12.3 80 177-259 41-122 (214)
86 3q87_B N6 adenine specific DNA 99.4 2.5E-13 8.6E-18 110.8 8.9 107 164-286 8-134 (170)
87 1zx0_A Guanidinoacetate N-meth 99.4 1.2E-13 4E-18 118.4 7.2 78 176-258 59-139 (236)
88 3iv6_A Putative Zn-dependent a 99.4 4.4E-13 1.5E-17 116.8 10.9 101 166-277 34-150 (261)
89 3bxo_A N,N-dimethyltransferase 99.4 6.8E-13 2.3E-17 113.1 11.8 91 176-277 39-143 (239)
90 3ggd_A SAM-dependent methyltra 99.4 2.3E-13 7.9E-18 116.9 8.2 97 176-280 55-168 (245)
91 3p9n_A Possible methyltransfer 99.4 1.1E-13 3.6E-18 114.6 5.7 101 176-280 43-158 (189)
92 3bgv_A MRNA CAP guanine-N7 met 99.4 8.4E-13 2.9E-17 117.8 11.7 106 177-283 34-163 (313)
93 1dl5_A Protein-L-isoaspartate 99.4 9.9E-13 3.4E-17 117.8 11.9 109 166-277 64-177 (317)
94 2yxe_A Protein-L-isoaspartate 99.4 1.5E-12 5.1E-17 109.5 12.1 109 167-278 67-180 (215)
95 1i9g_A Hypothetical protein RV 99.4 3.3E-12 1.1E-16 111.9 14.4 118 163-286 85-214 (280)
96 2fca_A TRNA (guanine-N(7)-)-me 99.4 7E-13 2.4E-17 112.1 9.7 79 177-258 38-118 (213)
97 1vlm_A SAM-dependent methyltra 99.4 8.2E-13 2.8E-17 111.7 10.1 88 178-281 48-145 (219)
98 3e8s_A Putative SAM dependent 99.4 2.7E-13 9.3E-18 114.4 7.0 100 168-279 43-156 (227)
99 1l3i_A Precorrin-6Y methyltran 99.4 6.2E-13 2.1E-17 109.1 8.9 116 166-286 22-145 (192)
100 3mti_A RRNA methylase; SAM-dep 99.4 1.4E-12 4.6E-17 107.2 10.6 75 176-255 21-96 (185)
101 3dxy_A TRNA (guanine-N(7)-)-me 99.4 6E-13 2E-17 113.1 8.7 104 177-283 34-158 (218)
102 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.3E-12 4.3E-17 112.3 10.3 82 176-257 45-132 (235)
103 1o54_A SAM-dependent O-methylt 99.4 5.3E-12 1.8E-16 110.7 14.2 116 163-286 98-224 (277)
104 2a14_A Indolethylamine N-methy 99.4 2.2E-13 7.6E-18 118.8 5.3 103 174-277 52-199 (263)
105 3evz_A Methyltransferase; NYSG 99.4 4.9E-12 1.7E-16 107.5 13.5 83 175-262 53-137 (230)
106 1wzn_A SAM-dependent methyltra 99.4 3.3E-12 1.1E-16 109.9 12.5 101 169-276 33-146 (252)
107 3orh_A Guanidinoacetate N-meth 99.4 3.2E-13 1.1E-17 116.0 5.7 95 176-275 59-170 (236)
108 4dcm_A Ribosomal RNA large sub 99.4 5.4E-12 1.8E-16 115.7 13.7 112 166-279 211-338 (375)
109 1jg1_A PIMT;, protein-L-isoasp 99.4 3.3E-12 1.1E-16 109.3 11.2 108 166-278 80-192 (235)
110 3m33_A Uncharacterized protein 99.4 6.2E-12 2.1E-16 106.9 12.8 70 176-255 47-118 (226)
111 3mq2_A 16S rRNA methyltransfer 99.4 1E-12 3.4E-17 110.9 7.7 102 173-275 23-140 (218)
112 2b25_A Hypothetical protein; s 99.4 1E-11 3.6E-16 111.9 14.7 123 163-285 91-229 (336)
113 3dmg_A Probable ribosomal RNA 99.4 5.3E-12 1.8E-16 115.9 12.7 100 176-281 232-346 (381)
114 3g89_A Ribosomal RNA small sub 99.4 2.7E-12 9.4E-17 111.2 10.3 79 176-257 79-160 (249)
115 1fbn_A MJ fibrillarin homologu 99.4 6.2E-12 2.1E-16 107.3 12.3 94 170-274 67-177 (230)
116 2fyt_A Protein arginine N-meth 99.4 5.8E-12 2E-16 114.0 12.8 98 167-268 54-154 (340)
117 2r3s_A Uncharacterized protein 99.4 5.3E-12 1.8E-16 113.4 12.4 108 167-278 153-274 (335)
118 1qzz_A RDMB, aclacinomycin-10- 99.3 7.4E-12 2.5E-16 114.3 13.3 105 167-276 172-288 (374)
119 1x19_A CRTF-related protein; m 99.3 7.4E-12 2.5E-16 113.9 12.9 106 167-277 180-297 (359)
120 4dzr_A Protein-(glutamine-N5) 99.3 4.1E-13 1.4E-17 112.3 4.1 87 167-258 19-111 (215)
121 2i62_A Nicotinamide N-methyltr 99.3 1.1E-12 3.8E-17 113.5 6.9 103 174-277 53-200 (265)
122 3gwz_A MMCR; methyltransferase 99.3 1.1E-11 3.9E-16 113.2 14.0 107 167-278 192-310 (369)
123 2fpo_A Methylase YHHF; structu 99.3 7.5E-13 2.6E-17 110.9 5.5 99 177-280 54-165 (202)
124 1i1n_A Protein-L-isoaspartate 99.3 1.1E-11 3.8E-16 105.0 12.9 102 175-277 75-184 (226)
125 2yvl_A TRMI protein, hypotheti 99.3 2.7E-11 9.3E-16 103.9 15.4 115 164-287 78-202 (248)
126 2vdv_E TRNA (guanine-N(7)-)-me 99.3 7.5E-12 2.6E-16 107.9 11.6 79 177-255 49-135 (246)
127 1xdz_A Methyltransferase GIDB; 99.3 7.2E-12 2.4E-16 107.6 11.3 93 176-275 69-174 (240)
128 3eey_A Putative rRNA methylase 99.3 3.3E-12 1.1E-16 105.9 8.8 81 176-258 21-103 (197)
129 3i53_A O-methyltransferase; CO 99.3 7.2E-12 2.5E-16 112.7 11.6 101 173-278 165-277 (332)
130 2g72_A Phenylethanolamine N-me 99.3 1.1E-12 3.7E-17 115.7 6.0 98 177-275 71-215 (289)
131 1jsx_A Glucose-inhibited divis 99.3 1E-11 3.4E-16 103.7 11.6 101 177-286 65-175 (207)
132 3gdh_A Trimethylguanosine synt 99.3 1.8E-12 6.2E-17 111.0 6.9 87 177-268 78-164 (241)
133 2ift_A Putative methylase HI07 99.3 1.9E-12 6.4E-17 108.4 6.8 100 177-279 53-167 (201)
134 3uwp_A Histone-lysine N-methyl 99.3 2.7E-12 9.4E-17 117.7 8.4 108 166-275 162-288 (438)
135 3q7e_A Protein arginine N-meth 99.3 7.2E-12 2.5E-16 113.8 11.0 89 176-268 65-156 (349)
136 2pbf_A Protein-L-isoaspartate 99.3 8.5E-12 2.9E-16 105.9 10.7 101 175-276 78-194 (227)
137 3dp7_A SAM-dependent methyltra 99.3 9E-12 3.1E-16 113.6 11.2 97 177-277 179-289 (363)
138 3lpm_A Putative methyltransfer 99.3 7.4E-12 2.5E-16 108.8 10.1 89 167-258 38-129 (259)
139 2esr_A Methyltransferase; stru 99.3 8.7E-13 3E-17 107.6 3.8 113 167-282 20-145 (177)
140 2b3t_A Protein methyltransfera 99.3 2.5E-11 8.5E-16 106.4 13.0 85 166-255 99-183 (276)
141 1nt2_A Fibrillarin-like PRE-rR 99.3 1.5E-11 5.1E-16 103.7 11.2 77 173-255 53-133 (210)
142 4df3_A Fibrillarin-like rRNA/T 99.3 1.2E-11 4.2E-16 105.8 10.6 97 172-275 72-182 (233)
143 1tw3_A COMT, carminomycin 4-O- 99.3 2E-11 6.8E-16 110.9 12.6 106 167-277 173-290 (360)
144 3lec_A NADB-rossmann superfami 99.3 1E-11 3.6E-16 105.9 10.0 115 167-287 13-135 (230)
145 3a27_A TYW2, uncharacterized p 99.3 2.6E-11 8.9E-16 106.3 12.9 96 175-278 117-222 (272)
146 2fhp_A Methylase, putative; al 99.3 5.3E-12 1.8E-16 103.5 7.9 112 166-281 32-160 (187)
147 3mcz_A O-methyltransferase; ad 99.3 1.1E-11 3.8E-16 112.2 10.6 107 168-277 169-289 (352)
148 2frn_A Hypothetical protein PH 99.3 2.1E-11 7.3E-16 107.2 12.1 102 167-278 117-228 (278)
149 2pjd_A Ribosomal RNA small sub 99.3 6.4E-12 2.2E-16 113.8 8.9 107 166-278 185-306 (343)
150 2ozv_A Hypothetical protein AT 99.3 2.2E-11 7.5E-16 106.0 12.0 88 167-256 26-123 (260)
151 1zq9_A Probable dimethyladenos 99.3 1.6E-11 5.5E-16 108.4 11.2 94 166-265 17-121 (285)
152 3gru_A Dimethyladenosine trans 99.3 1.6E-11 5.4E-16 108.8 11.1 88 164-258 37-124 (295)
153 2nxc_A L11 mtase, ribosomal pr 99.3 3.3E-12 1.1E-16 110.9 6.5 105 176-287 119-230 (254)
154 1ne2_A Hypothetical protein TA 99.3 2.6E-11 9E-16 100.9 11.6 77 175-263 49-125 (200)
155 1ws6_A Methyltransferase; stru 99.3 2.3E-12 8E-17 104.0 4.8 99 177-281 41-153 (171)
156 3u81_A Catechol O-methyltransf 99.3 4.2E-12 1.4E-16 107.6 6.5 114 168-283 49-178 (221)
157 3r0q_C Probable protein argini 99.3 1.8E-11 6.3E-16 112.2 10.9 90 167-261 53-142 (376)
158 2ip2_A Probable phenazine-spec 99.3 1.3E-11 4.6E-16 110.9 9.7 105 167-277 158-274 (334)
159 3gnl_A Uncharacterized protein 99.3 1.7E-11 5.9E-16 105.3 9.9 114 167-286 13-134 (244)
160 2y1w_A Histone-arginine methyl 99.3 3.5E-11 1.2E-15 109.2 12.4 93 167-264 40-132 (348)
161 1r18_A Protein-L-isoaspartate( 99.3 2.1E-11 7.1E-16 103.7 10.1 109 168-277 73-196 (227)
162 1ej0_A FTSJ; methyltransferase 99.3 1.6E-11 5.4E-16 99.0 8.7 98 175-286 20-147 (180)
163 3ntv_A MW1564 protein; rossman 99.2 9.5E-12 3.3E-16 106.4 7.6 93 166-260 60-154 (232)
164 1af7_A Chemotaxis receptor met 99.2 9.7E-12 3.3E-16 109.1 7.7 88 177-264 105-229 (274)
165 1g6q_1 HnRNP arginine N-methyl 99.2 2.7E-11 9.2E-16 109.1 10.7 89 176-268 37-128 (328)
166 1wy7_A Hypothetical protein PH 99.2 8.5E-11 2.9E-15 98.1 13.0 81 174-262 46-126 (207)
167 3tm4_A TRNA (guanine N2-)-meth 99.2 4.6E-11 1.6E-15 109.4 12.0 117 165-284 206-338 (373)
168 3giw_A Protein of unknown func 99.2 2.1E-11 7.3E-16 106.4 8.7 109 168-279 68-204 (277)
169 3tma_A Methyltransferase; thum 99.2 4.6E-11 1.6E-15 108.5 11.3 119 163-284 189-326 (354)
170 1u2z_A Histone-lysine N-methyl 99.2 3.4E-11 1.2E-15 111.9 10.4 109 164-274 229-358 (433)
171 3dr5_A Putative O-methyltransf 99.2 1.7E-11 5.8E-16 104.3 7.3 92 168-260 47-141 (221)
172 1fp1_D Isoliquiritigenin 2'-O- 99.2 2.6E-11 9.1E-16 110.8 8.9 97 168-277 199-308 (372)
173 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.1E-11 1.8E-15 101.6 10.2 81 172-257 72-156 (233)
174 3kr9_A SAM-dependent methyltra 99.2 5.3E-11 1.8E-15 101.3 9.8 113 167-286 7-128 (225)
175 3frh_A 16S rRNA methylase; met 99.2 7.1E-11 2.4E-15 100.8 10.5 93 176-276 104-206 (253)
176 2gpy_A O-methyltransferase; st 99.2 2.8E-11 9.5E-16 103.2 7.3 109 166-276 43-161 (233)
177 3id6_C Fibrillarin-like rRNA/T 99.2 2.8E-10 9.5E-15 97.4 13.4 94 174-275 73-181 (232)
178 2plw_A Ribosomal RNA methyltra 99.2 9E-11 3.1E-15 97.4 9.7 98 175-286 20-165 (201)
179 2h00_A Methyltransferase 10 do 99.2 1.5E-10 5.2E-15 99.9 11.5 82 177-260 65-152 (254)
180 3b3j_A Histone-arginine methyl 99.2 1.3E-10 4.6E-15 109.6 12.0 93 167-264 148-240 (480)
181 1qam_A ERMC' methyltransferase 99.2 8.2E-11 2.8E-15 101.5 9.4 83 164-254 17-100 (244)
182 4hc4_A Protein arginine N-meth 99.2 8E-11 2.7E-15 107.6 9.7 74 177-255 83-156 (376)
183 3p2e_A 16S rRNA methylase; met 99.2 3.3E-11 1.1E-15 102.8 6.6 77 176-255 23-104 (225)
184 3tqs_A Ribosomal RNA small sub 99.2 1E-10 3.5E-15 101.6 9.8 84 164-255 16-103 (255)
185 1g8a_A Fibrillarin-like PRE-rR 99.2 3.1E-10 1E-14 96.2 12.3 80 173-257 69-152 (227)
186 3reo_A (ISO)eugenol O-methyltr 99.2 8.9E-11 3E-15 107.3 9.5 97 168-277 193-302 (368)
187 1ixk_A Methyltransferase; open 99.1 1.2E-10 4E-15 104.3 9.9 85 168-255 109-194 (315)
188 2h1r_A Dimethyladenosine trans 99.1 1.4E-10 4.8E-15 103.0 10.1 85 166-257 31-115 (299)
189 1uwv_A 23S rRNA (uracil-5-)-me 99.1 2.2E-10 7.4E-15 107.0 11.7 85 166-255 275-363 (433)
190 3lst_A CALO1 methyltransferase 99.1 6.8E-11 2.3E-15 107.1 8.1 103 167-277 174-288 (348)
191 3tfw_A Putative O-methyltransf 99.1 7E-11 2.4E-15 102.0 7.7 102 174-277 60-172 (248)
192 3lcv_B Sisomicin-gentamicin re 99.1 8.3E-11 2.8E-15 101.3 8.0 105 166-277 123-237 (281)
193 2zfu_A Nucleomethylin, cerebra 99.1 1.1E-10 3.6E-15 98.1 8.4 79 176-278 66-154 (215)
194 1nv8_A HEMK protein; class I a 99.1 1.6E-10 5.5E-15 101.9 9.8 85 166-255 112-199 (284)
195 3p9c_A Caffeic acid O-methyltr 99.1 1.5E-10 5.1E-15 105.7 9.6 98 168-278 191-301 (364)
196 1o9g_A RRNA methyltransferase; 99.1 1E-10 3.5E-15 100.9 8.1 96 168-264 42-184 (250)
197 3duw_A OMT, O-methyltransferas 99.1 1.1E-10 3.8E-15 98.6 7.3 109 167-277 48-169 (223)
198 1fp2_A Isoflavone O-methyltran 99.1 1.1E-10 3.8E-15 105.8 7.6 89 176-277 187-290 (352)
199 3bzb_A Uncharacterized protein 99.1 1.9E-10 6.5E-15 101.2 8.7 99 167-267 69-182 (281)
200 3c3p_A Methyltransferase; NP_9 99.1 1E-10 3.5E-15 98.1 6.6 78 177-257 56-135 (210)
201 3fut_A Dimethyladenosine trans 99.1 1.7E-10 5.9E-15 101.0 8.2 84 164-256 34-118 (271)
202 1m6y_A S-adenosyl-methyltransf 99.1 9.7E-11 3.3E-15 104.1 6.4 97 167-267 16-119 (301)
203 3ajd_A Putative methyltransfer 99.1 2.2E-10 7.4E-15 100.5 8.3 83 170-255 76-163 (274)
204 2hnk_A SAM-dependent O-methylt 99.1 1.6E-10 5.5E-15 99.0 7.0 109 166-276 49-182 (239)
205 3tr6_A O-methyltransferase; ce 99.1 8.8E-11 3E-15 99.3 5.1 100 176-277 63-176 (225)
206 2igt_A SAM dependent methyltra 99.1 8.2E-11 2.8E-15 106.1 5.1 86 167-255 142-232 (332)
207 2qm3_A Predicted methyltransfe 99.1 9E-10 3.1E-14 100.8 12.1 80 176-259 171-252 (373)
208 2yxl_A PH0851 protein, 450AA l 99.1 1.2E-09 4E-14 102.5 12.7 93 168-263 250-351 (450)
209 4a6d_A Hydroxyindole O-methylt 99.0 9.9E-10 3.4E-14 99.7 11.4 104 168-277 170-285 (353)
210 2bm8_A Cephalosporin hydroxyla 99.0 6.3E-11 2.2E-15 101.7 3.1 73 177-257 81-161 (236)
211 1sqg_A SUN protein, FMU protei 99.0 7.4E-10 2.5E-14 103.2 10.6 93 167-263 236-336 (429)
212 3bwc_A Spermidine synthase; SA 99.0 2.7E-10 9.1E-15 101.5 7.2 87 176-262 94-183 (304)
213 3r3h_A O-methyltransferase, SA 99.0 4.2E-11 1.4E-15 103.2 1.3 90 168-259 51-147 (242)
214 2nyu_A Putative ribosomal RNA 99.0 1E-09 3.5E-14 90.5 9.5 98 175-286 20-156 (196)
215 3gjy_A Spermidine synthase; AP 99.0 1.2E-09 4.2E-14 97.3 10.5 76 179-257 91-168 (317)
216 1sui_A Caffeoyl-COA O-methyltr 99.0 2.1E-10 7.4E-15 99.0 4.9 80 176-257 78-165 (247)
217 2f8l_A Hypothetical protein LM 99.0 1.5E-09 5E-14 98.2 10.5 100 158-262 107-215 (344)
218 3adn_A Spermidine synthase; am 99.0 1E-09 3.5E-14 97.3 9.0 82 177-258 83-167 (294)
219 3hp7_A Hemolysin, putative; st 99.0 6.8E-10 2.3E-14 97.9 7.7 97 169-274 76-184 (291)
220 1zg3_A Isoflavanone 4'-O-methy 99.0 5.9E-10 2E-14 101.3 7.4 88 177-277 193-295 (358)
221 3cbg_A O-methyltransferase; cy 99.0 4.6E-10 1.6E-14 95.9 6.1 81 176-258 71-158 (232)
222 2wa2_A Non-structural protein 99.0 1.6E-10 5.5E-15 101.5 3.1 99 175-281 80-199 (276)
223 3sso_A Methyltransferase; macr 99.0 4.7E-10 1.6E-14 102.6 6.3 101 163-277 203-326 (419)
224 2oxt_A Nucleoside-2'-O-methylt 99.0 2.1E-10 7.1E-15 100.2 3.6 104 169-280 66-190 (265)
225 3k6r_A Putative transferase PH 99.0 3E-09 1E-13 93.3 10.8 84 167-256 117-200 (278)
226 3uzu_A Ribosomal RNA small sub 99.0 1.6E-09 5.4E-14 95.3 8.8 74 166-246 31-106 (279)
227 1xj5_A Spermidine synthase 1; 99.0 3.9E-09 1.3E-13 95.1 11.3 82 176-257 119-203 (334)
228 2avd_A Catechol-O-methyltransf 99.0 5.2E-10 1.8E-14 94.8 5.3 89 167-257 59-154 (229)
229 1uir_A Polyamine aminopropyltr 99.0 1.3E-09 4.5E-14 97.4 8.1 84 177-260 77-163 (314)
230 1yub_A Ermam, rRNA methyltrans 98.9 5.9E-11 2E-15 102.3 -0.8 82 166-255 18-100 (245)
231 2o07_A Spermidine synthase; st 98.9 1.5E-09 5.2E-14 96.6 8.2 82 176-257 94-177 (304)
232 1iy9_A Spermidine synthase; ro 98.9 2.9E-09 1E-13 93.4 9.7 82 177-258 75-158 (275)
233 3c0k_A UPF0064 protein YCCW; P 98.9 1.7E-09 5.7E-14 99.7 8.4 77 177-255 220-300 (396)
234 3opn_A Putative hemolysin; str 98.9 1.1E-10 3.8E-15 99.9 0.3 51 169-220 28-79 (232)
235 3v97_A Ribosomal RNA large sub 98.9 1.6E-09 5.3E-14 106.9 8.5 78 177-256 539-617 (703)
236 2ld4_A Anamorsin; methyltransf 98.9 4.2E-10 1.4E-14 91.5 3.7 81 173-276 8-102 (176)
237 3dou_A Ribosomal RNA large sub 98.9 3.3E-09 1.1E-13 88.0 9.0 95 175-285 23-149 (191)
238 3c3y_A Pfomt, O-methyltransfer 98.9 9.6E-10 3.3E-14 94.2 5.9 80 176-257 69-156 (237)
239 2frx_A Hypothetical protein YE 98.9 5.7E-09 1.9E-13 98.4 11.6 82 170-254 108-193 (479)
240 1inl_A Spermidine synthase; be 98.9 1.8E-09 6.2E-14 95.7 7.8 80 177-256 90-171 (296)
241 2yx1_A Hypothetical protein MJ 98.9 3.6E-09 1.2E-13 95.4 9.3 95 177-279 195-295 (336)
242 3m6w_A RRNA methylase; rRNA me 98.9 1.8E-09 6.1E-14 101.2 7.2 83 168-254 92-176 (464)
243 2jjq_A Uncharacterized RNA met 98.9 1.3E-08 4.6E-13 94.5 13.0 73 176-256 289-361 (425)
244 3ftd_A Dimethyladenosine trans 98.9 2.6E-09 8.8E-14 92.4 7.5 73 166-246 20-92 (249)
245 2b78_A Hypothetical protein SM 98.9 4.2E-09 1.5E-13 96.7 9.1 78 176-255 211-292 (385)
246 2as0_A Hypothetical protein PH 98.9 2.4E-09 8.1E-14 98.7 7.4 76 177-255 217-296 (396)
247 2pt6_A Spermidine synthase; tr 98.9 3E-09 1E-13 95.3 7.8 80 177-256 116-197 (321)
248 1qyr_A KSGA, high level kasuga 98.9 1.2E-09 4E-14 94.8 4.5 84 166-256 10-98 (252)
249 1wxx_A TT1595, hypothetical pr 98.9 1.4E-09 4.9E-14 99.7 5.3 74 177-255 209-286 (382)
250 4dmg_A Putative uncharacterize 98.9 5.4E-09 1.8E-13 96.2 8.9 74 177-256 214-288 (393)
251 2okc_A Type I restriction enzy 98.9 1.6E-08 5.3E-13 94.7 12.2 120 140-261 129-266 (445)
252 3ldu_A Putative methylase; str 98.8 1E-08 3.4E-13 94.2 10.1 90 165-257 183-310 (385)
253 2i7c_A Spermidine synthase; tr 98.8 8.7E-09 3E-13 90.7 9.2 82 176-257 77-160 (283)
254 2b2c_A Spermidine synthase; be 98.8 2.8E-09 9.4E-14 95.3 5.9 81 177-257 108-190 (314)
255 3k0b_A Predicted N6-adenine-sp 98.8 1.2E-08 4.1E-13 93.9 10.4 90 163-255 187-314 (393)
256 3bt7_A TRNA (uracil-5-)-methyl 98.8 1.7E-08 5.8E-13 92.2 10.6 112 166-283 203-334 (369)
257 2r6z_A UPF0341 protein in RSP 98.8 9.8E-10 3.3E-14 95.5 2.2 88 170-261 76-174 (258)
258 3ldg_A Putative uncharacterize 98.8 2E-08 7E-13 92.0 10.8 88 165-255 182-307 (384)
259 2cmg_A Spermidine synthase; tr 98.8 6.8E-09 2.3E-13 90.4 7.1 89 177-275 72-171 (262)
260 1mjf_A Spermidine synthase; sp 98.8 8.3E-09 2.9E-13 90.7 7.5 78 177-257 75-161 (281)
261 2b9e_A NOL1/NOP2/SUN domain fa 98.8 3.7E-08 1.3E-12 87.7 10.8 83 169-254 94-180 (309)
262 3m4x_A NOL1/NOP2/SUN family pr 98.7 6.8E-09 2.3E-13 97.1 5.7 85 168-255 96-182 (456)
263 3ll7_A Putative methyltransfer 98.7 1.2E-08 4.1E-13 94.0 5.8 76 177-255 93-170 (410)
264 2ih2_A Modification methylase 98.7 1.9E-08 6.5E-13 92.9 6.6 86 157-255 19-105 (421)
265 2p41_A Type II methyltransfera 98.7 4.1E-09 1.4E-13 93.8 1.3 94 175-278 80-194 (305)
266 3lkd_A Type I restriction-modi 98.6 3.9E-07 1.3E-11 87.1 11.7 115 140-255 175-304 (542)
267 2oyr_A UPF0341 protein YHIQ; a 98.5 1.1E-07 3.7E-12 82.5 6.1 92 167-260 76-176 (258)
268 2xyq_A Putative 2'-O-methyl tr 98.5 1.6E-07 5.6E-12 82.7 7.0 95 173-286 59-182 (290)
269 2ar0_A M.ecoki, type I restric 98.5 4.7E-07 1.6E-11 86.6 9.8 103 157-260 149-273 (541)
270 3v97_A Ribosomal RNA large sub 98.5 5.5E-07 1.9E-11 88.7 10.2 90 164-255 177-310 (703)
271 2jny_A Uncharacterized BCR; st 98.4 1.1E-07 3.7E-12 64.5 2.5 47 67-122 6-52 (67)
272 2dul_A N(2),N(2)-dimethylguano 98.4 2.3E-07 8E-12 84.8 5.5 79 177-255 47-138 (378)
273 2jr6_A UPF0434 protein NMA0874 98.4 1.4E-07 4.6E-12 64.3 2.6 46 67-121 4-49 (68)
274 1wg8_A Predicted S-adenosylmet 98.4 7.2E-07 2.4E-11 77.7 7.3 93 167-268 12-111 (285)
275 4gqb_A Protein arginine N-meth 98.4 1.3E-06 4.5E-11 84.4 9.8 74 177-254 357-434 (637)
276 2pk7_A Uncharacterized protein 98.3 1.6E-07 5.4E-12 64.1 2.3 46 67-121 4-49 (69)
277 3khk_A Type I restriction-modi 98.3 1.1E-06 3.6E-11 84.2 8.7 116 139-257 202-338 (544)
278 2js4_A UPF0434 protein BB2007; 98.3 1.5E-07 5E-12 64.5 2.0 47 67-122 4-50 (70)
279 2qfm_A Spermine synthase; sper 98.3 3.3E-07 1.1E-11 82.8 4.8 79 177-256 188-275 (364)
280 2hf1_A Tetraacyldisaccharide-1 98.3 1.3E-07 4.4E-12 64.4 1.6 46 67-121 4-49 (68)
281 3axs_A Probable N(2),N(2)-dime 98.3 1E-06 3.4E-11 80.9 6.2 79 176-256 51-133 (392)
282 2zig_A TTHA0409, putative modi 98.2 6.6E-06 2.3E-10 72.6 9.1 61 161-224 220-280 (297)
283 2kpi_A Uncharacterized protein 98.1 9.5E-07 3.3E-11 57.8 2.4 44 67-121 6-51 (56)
284 3cvo_A Methyltransferase-like 98.1 1.1E-05 3.7E-10 67.2 9.2 77 177-257 30-131 (202)
285 4auk_A Ribosomal RNA large sub 98.1 6.4E-06 2.2E-10 74.5 7.3 71 176-258 210-280 (375)
286 2k4m_A TR8_protein, UPF0146 pr 98.1 5.1E-06 1.7E-10 65.1 5.6 60 178-257 36-98 (153)
287 2efj_A 3,7-dimethylxanthine me 98.0 2.9E-05 9.8E-10 70.8 10.2 83 178-265 53-166 (384)
288 2k5r_A Uncharacterized protein 98.0 2.9E-06 9.8E-11 61.6 2.8 54 67-120 4-75 (97)
289 3ua3_A Protein arginine N-meth 98.0 1.4E-05 4.7E-10 77.7 8.3 75 178-255 410-502 (745)
290 3ufb_A Type I restriction-modi 97.9 5E-05 1.7E-09 72.4 10.6 116 140-258 176-312 (530)
291 3evf_A RNA-directed RNA polyme 97.9 1.2E-05 4E-10 69.7 5.0 108 173-285 70-196 (277)
292 3s1s_A Restriction endonucleas 97.9 2.3E-05 7.9E-10 77.2 7.5 102 157-258 295-409 (878)
293 3o4f_A Spermidine synthase; am 97.8 0.00015 5.3E-09 63.6 10.6 80 177-256 83-165 (294)
294 3b5i_A S-adenosyl-L-methionine 97.7 0.00013 4.6E-09 66.3 9.5 88 178-265 53-167 (374)
295 3tka_A Ribosomal RNA small sub 97.7 3.5E-05 1.2E-09 68.6 5.3 95 167-268 47-150 (347)
296 3gcz_A Polyprotein; flavivirus 97.6 2.3E-05 7.8E-10 67.9 2.5 81 174-259 87-167 (282)
297 1g60_A Adenine-specific methyl 97.5 0.00032 1.1E-08 60.5 8.2 61 161-224 197-257 (260)
298 1m6e_X S-adenosyl-L-methionnin 97.5 7.6E-05 2.6E-09 67.5 4.3 84 178-263 52-154 (359)
299 1i4w_A Mitochondrial replicati 97.4 0.00033 1.1E-08 63.2 8.0 73 164-242 39-117 (353)
300 4fzv_A Putative methyltransfer 97.3 0.00034 1.2E-08 63.2 7.0 85 169-254 140-229 (359)
301 2qy6_A UPF0209 protein YFCK; s 97.3 0.00021 7.3E-09 61.6 5.1 80 176-255 59-180 (257)
302 3p8z_A Mtase, non-structural p 97.3 0.00067 2.3E-08 57.2 7.2 100 174-280 75-191 (267)
303 3lkz_A Non-structural protein 97.2 0.001 3.5E-08 57.9 8.1 104 168-278 85-207 (321)
304 2wk1_A NOVP; transferase, O-me 97.0 0.00098 3.3E-08 58.2 6.4 81 176-257 105-218 (282)
305 3c6k_A Spermine synthase; sper 96.7 0.0014 4.8E-08 59.4 4.9 78 177-255 205-291 (381)
306 3eld_A Methyltransferase; flav 96.6 0.0012 4.2E-08 57.5 3.4 104 176-285 80-203 (300)
307 2px2_A Genome polyprotein [con 96.3 0.0019 6.4E-08 55.2 2.9 94 174-278 70-186 (269)
308 2py6_A Methyltransferase FKBM; 95.9 0.02 7E-07 52.5 7.8 49 175-223 224-274 (409)
309 1pft_A TFIIB, PFTFIIBN; N-term 95.8 0.0048 1.6E-07 39.0 2.4 32 70-110 4-36 (50)
310 3g7u_A Cytosine-specific methy 95.8 0.021 7.2E-07 51.8 7.6 70 179-257 3-80 (376)
311 1boo_A Protein (N-4 cytosine-s 95.7 0.016 5.5E-07 51.4 6.4 61 161-224 237-297 (323)
312 1g55_A DNA cytosine methyltran 95.6 0.0095 3.3E-07 53.4 4.3 72 178-257 2-77 (343)
313 1eg2_A Modification methylase 95.5 0.028 9.5E-07 49.8 7.2 61 161-224 227-290 (319)
314 3r24_A NSP16, 2'-O-methyl tran 95.4 0.093 3.2E-06 45.7 9.5 99 167-284 94-226 (344)
315 2c7p_A Modification methylase 94.4 0.081 2.8E-06 47.0 6.9 70 178-258 11-81 (327)
316 2vz8_A Fatty acid synthase; tr 94.4 0.01 3.4E-07 66.1 1.1 94 176-275 1239-1348(2512)
317 1rjd_A PPM1P, carboxy methyl t 94.0 0.15 5.2E-06 45.3 7.8 92 171-263 91-209 (334)
318 2qrv_A DNA (cytosine-5)-methyl 94.0 0.089 3E-06 46.0 6.1 73 176-256 14-91 (295)
319 1zkd_A DUF185; NESG, RPR58, st 93.6 0.31 1.1E-05 44.2 9.2 77 178-263 81-164 (387)
320 1dl6_A Transcription factor II 93.5 0.055 1.9E-06 35.2 2.9 33 68-109 8-41 (58)
321 3q87_A Putative uncharacterize 93.3 0.021 7.2E-07 43.2 0.8 27 94-120 95-121 (125)
322 2oo3_A Protein involved in cat 93.2 0.07 2.4E-06 46.3 4.0 94 178-278 92-201 (283)
323 4h0n_A DNMT2; SAH binding, tra 93.0 0.11 3.9E-06 46.1 5.3 70 179-256 4-77 (333)
324 3qv2_A 5-cytosine DNA methyltr 93.0 0.11 3.8E-06 46.1 5.2 71 178-257 10-85 (327)
325 3j20_Y 30S ribosomal protein S 91.4 0.09 3.1E-06 33.1 1.9 30 71-109 19-48 (50)
326 3ubt_Y Modification methylase 91.4 0.37 1.3E-05 42.3 6.7 67 180-256 2-69 (331)
327 3goh_A Alcohol dehydrogenase, 91.4 0.83 2.9E-05 39.7 8.9 88 171-274 136-228 (315)
328 2j6a_A Protein TRM112; transla 90.4 0.062 2.1E-06 41.5 0.5 28 94-121 105-132 (141)
329 3me5_A Cytosine-specific methy 90.1 0.44 1.5E-05 44.5 6.1 73 164-242 68-146 (482)
330 1vq8_Z 50S ribosomal protein L 90.0 0.1 3.5E-06 36.5 1.3 31 70-109 26-56 (83)
331 4f3n_A Uncharacterized ACR, CO 89.7 0.52 1.8E-05 43.3 6.1 79 178-263 138-222 (432)
332 3two_A Mannitol dehydrogenase; 89.2 0.82 2.8E-05 40.3 7.0 90 173-276 172-266 (348)
333 2k5c_A Uncharacterized protein 89.1 0.04 1.4E-06 37.9 -1.3 41 70-110 7-63 (95)
334 3uog_A Alcohol dehydrogenase; 88.0 1.8 6.2E-05 38.4 8.5 49 171-220 183-232 (363)
335 3llv_A Exopolyphosphatase-rela 87.2 2.2 7.5E-05 32.0 7.5 66 178-255 6-77 (141)
336 1piw_A Hypothetical zinc-type 87.1 2.1 7.1E-05 37.9 8.3 46 173-220 175-222 (360)
337 3fwz_A Inner membrane protein 86.3 2.5 8.4E-05 31.9 7.3 66 178-255 7-78 (140)
338 1f8f_A Benzyl alcohol dehydrog 86.1 1.8 6.2E-05 38.5 7.3 50 171-220 184-234 (371)
339 2k4x_A 30S ribosomal protein S 86.1 0.49 1.7E-05 30.3 2.5 30 71-109 18-47 (55)
340 1jvb_A NAD(H)-dependent alcoho 85.3 2.7 9.1E-05 37.0 8.0 90 173-275 166-271 (347)
341 1qyp_A RNA polymerase II; tran 85.1 0.25 8.4E-06 31.8 0.8 39 71-109 15-54 (57)
342 2jne_A Hypothetical protein YF 84.9 0.32 1.1E-05 34.7 1.3 28 72-110 33-60 (101)
343 2dph_A Formaldehyde dismutase; 84.9 1.6 5.6E-05 39.2 6.5 49 171-219 179-228 (398)
344 2uyo_A Hypothetical protein ML 84.7 4.5 0.00015 35.3 9.0 83 179-264 104-195 (310)
345 3jyn_A Quinone oxidoreductase; 84.4 3.7 0.00013 35.7 8.4 95 169-276 132-240 (325)
346 3lyl_A 3-oxoacyl-(acyl-carrier 84.3 5.7 0.00019 32.7 9.2 77 178-260 5-94 (247)
347 4fn4_A Short chain dehydrogena 84.1 5.2 0.00018 33.8 8.9 77 177-259 6-95 (254)
348 2jrp_A Putative cytoplasmic pr 84.0 0.55 1.9E-05 32.5 2.2 27 72-109 3-29 (81)
349 4b7c_A Probable oxidoreductase 83.7 1.7 5.6E-05 38.1 5.9 50 168-218 140-191 (336)
350 1twf_L ABC10-alpha, DNA-direct 83.4 0.55 1.9E-05 31.6 1.9 27 70-106 27-53 (70)
351 3j21_g 50S ribosomal protein L 83.3 0.53 1.8E-05 29.6 1.7 27 68-107 11-37 (51)
352 4eye_A Probable oxidoreductase 82.9 2.4 8.3E-05 37.2 6.6 49 171-220 153-203 (342)
353 4g81_D Putative hexonate dehyd 82.6 3.5 0.00012 34.9 7.2 79 177-261 8-99 (255)
354 3ius_A Uncharacterized conserv 82.4 6.6 0.00023 32.9 9.0 66 179-260 6-75 (286)
355 3c85_A Putative glutathione-re 81.9 3.2 0.00011 32.6 6.4 66 178-255 39-112 (183)
356 1ae1_A Tropinone reductase-I; 81.9 5.9 0.0002 33.3 8.5 77 177-259 20-110 (273)
357 3tjr_A Short chain dehydrogena 81.5 7.8 0.00027 33.2 9.3 82 173-260 26-120 (301)
358 3iht_A S-adenosyl-L-methionine 81.4 3.5 0.00012 32.3 6.0 33 178-210 41-73 (174)
359 2ae2_A Protein (tropinone redu 81.3 5.9 0.0002 33.0 8.3 77 177-259 8-98 (260)
360 3qiv_A Short-chain dehydrogena 81.3 6.9 0.00024 32.3 8.6 76 177-258 8-96 (253)
361 3ucx_A Short chain dehydrogena 81.3 8.9 0.0003 32.0 9.4 76 177-258 10-98 (264)
362 3s2e_A Zinc-containing alcohol 81.2 4.2 0.00014 35.5 7.5 49 171-220 160-209 (340)
363 1gh9_A 8.3 kDa protein (gene M 81.1 0.66 2.2E-05 31.3 1.6 31 71-112 4-34 (71)
364 3swr_A DNA (cytosine-5)-methyl 81.1 1.9 6.4E-05 43.9 5.7 72 177-257 539-627 (1002)
365 1pl8_A Human sorbitol dehydrog 80.9 3.9 0.00013 36.0 7.3 50 171-220 165-215 (356)
366 1kol_A Formaldehyde dehydrogen 80.8 4.2 0.00014 36.4 7.5 49 172-220 180-229 (398)
367 3qwb_A Probable quinone oxidor 80.5 4.8 0.00016 35.0 7.7 49 171-220 142-192 (334)
368 3tsc_A Putative oxidoreductase 80.5 7.1 0.00024 32.8 8.5 79 177-261 10-114 (277)
369 4hp8_A 2-deoxy-D-gluconate 3-d 80.4 10 0.00035 31.8 9.3 77 177-261 8-92 (247)
370 3jyw_9 60S ribosomal protein L 80.1 1.3 4.4E-05 29.9 2.8 31 70-109 25-55 (72)
371 3e8x_A Putative NAD-dependent 79.9 8.4 0.00029 31.3 8.6 75 177-264 20-100 (236)
372 2akl_A PHNA-like protein PA012 79.9 0.9 3.1E-05 34.2 2.2 27 73-109 29-55 (138)
373 4imr_A 3-oxoacyl-(acyl-carrier 79.7 4.4 0.00015 34.3 6.9 77 177-259 32-120 (275)
374 3h0g_I DNA-directed RNA polyme 79.7 1.7 5.9E-05 32.0 3.7 39 70-113 3-41 (113)
375 3h7a_A Short chain dehydrogena 79.7 5.3 0.00018 33.2 7.4 78 177-260 6-95 (252)
376 3rkr_A Short chain oxidoreduct 79.5 8.2 0.00028 32.1 8.5 77 176-258 27-116 (262)
377 1lss_A TRK system potassium up 79.4 9.1 0.00031 28.0 8.0 67 178-255 4-76 (140)
378 3l77_A Short-chain alcohol deh 79.1 13 0.00044 30.1 9.5 79 178-261 2-93 (235)
379 1pqw_A Polyketide synthase; ro 78.9 3.8 0.00013 32.6 5.9 47 171-219 32-81 (198)
380 3cc2_Z 50S ribosomal protein L 78.6 0.75 2.6E-05 34.0 1.4 30 70-109 59-89 (116)
381 3gaf_A 7-alpha-hydroxysteroid 78.4 9.3 0.00032 31.7 8.5 78 177-260 11-101 (256)
382 1tfi_A Transcriptional elongat 78.4 0.78 2.7E-05 28.7 1.2 39 70-108 8-47 (50)
383 4egf_A L-xylulose reductase; s 77.9 8.4 0.00029 32.2 8.1 79 177-260 19-110 (266)
384 3l9w_A Glutathione-regulated p 77.8 3.9 0.00013 37.2 6.3 66 178-255 4-75 (413)
385 3sju_A Keto reductase; short-c 77.1 11 0.00038 31.8 8.7 77 178-260 24-113 (279)
386 3imf_A Short chain dehydrogena 77.0 7.8 0.00027 32.2 7.6 76 178-259 6-94 (257)
387 3o38_A Short chain dehydrogena 76.7 12 0.00042 31.0 8.8 79 177-260 21-113 (266)
388 1cdo_A Alcohol dehydrogenase; 76.6 5.3 0.00018 35.4 6.8 49 171-219 186-235 (374)
389 1e3i_A Alcohol dehydrogenase, 76.5 5.4 0.00018 35.4 6.8 50 170-219 188-238 (376)
390 3v8b_A Putative dehydrogenase, 76.4 12 0.00041 31.7 8.8 77 177-259 27-116 (283)
391 3j21_i 50S ribosomal protein L 76.3 1.3 4.4E-05 30.8 2.0 30 71-109 35-64 (83)
392 1p0f_A NADP-dependent alcohol 76.1 4.4 0.00015 35.9 6.1 50 170-219 184-234 (373)
393 3tfo_A Putative 3-oxoacyl-(acy 76.1 9.9 0.00034 31.9 8.1 77 178-260 4-93 (264)
394 1ffk_W Ribosomal protein L37AE 76.1 0.89 3.1E-05 30.8 1.1 30 70-109 26-56 (73)
395 3iz5_m 60S ribosomal protein L 75.7 1.5 5.3E-05 31.0 2.3 30 71-109 36-65 (92)
396 2jhf_A Alcohol dehydrogenase E 75.6 5.8 0.0002 35.1 6.8 50 170-219 184-234 (374)
397 3awd_A GOX2181, putative polyo 75.5 15 0.00051 30.2 9.0 76 178-259 13-101 (260)
398 3jv7_A ADH-A; dehydrogenase, n 75.4 6.4 0.00022 34.4 6.9 47 174-220 168-215 (345)
399 4eez_A Alcohol dehydrogenase 1 75.3 7.2 0.00025 34.0 7.2 48 173-220 159-207 (348)
400 3svt_A Short-chain type dehydr 75.0 15 0.00051 30.9 9.0 79 177-258 10-101 (281)
401 1yb1_A 17-beta-hydroxysteroid 74.8 15 0.00052 30.6 9.0 78 177-260 30-120 (272)
402 3fpc_A NADP-dependent alcohol 74.7 6.1 0.00021 34.7 6.6 50 171-220 160-210 (352)
403 3pgx_A Carveol dehydrogenase; 74.5 18 0.00062 30.3 9.4 79 176-260 13-117 (280)
404 4da9_A Short-chain dehydrogena 74.4 18 0.00061 30.5 9.4 78 175-258 26-117 (280)
405 1uuf_A YAHK, zinc-type alcohol 74.3 5.8 0.0002 35.2 6.4 47 173-220 190-237 (369)
406 1e7w_A Pteridine reductase; di 74.2 15 0.00052 31.1 8.9 60 178-243 9-73 (291)
407 3po3_S Transcription elongatio 74.2 2.5 8.5E-05 33.9 3.5 40 69-108 135-175 (178)
408 2jah_A Clavulanic acid dehydro 74.1 17 0.00059 29.8 9.0 76 178-259 7-95 (247)
409 3pxx_A Carveol dehydrogenase; 74.1 19 0.00065 30.1 9.4 78 177-260 9-111 (287)
410 3ioy_A Short-chain dehydrogena 74.0 19 0.00066 31.0 9.6 80 177-260 7-99 (319)
411 1e3j_A NADP(H)-dependent ketos 73.7 8.4 0.00029 33.7 7.3 48 172-220 163-211 (352)
412 3sx2_A Putative 3-ketoacyl-(ac 73.7 17 0.00057 30.4 8.9 79 177-261 12-115 (278)
413 3uve_A Carveol dehydrogenase ( 73.7 17 0.00058 30.5 9.0 79 177-261 10-117 (286)
414 2fzw_A Alcohol dehydrogenase c 73.5 5.6 0.00019 35.2 6.1 51 170-220 183-234 (373)
415 3izc_m 60S ribosomal protein R 73.5 1.8 6.1E-05 30.6 2.1 30 71-109 36-65 (92)
416 3uko_A Alcohol dehydrogenase c 73.4 4 0.00014 36.3 5.1 51 169-219 185-236 (378)
417 3flo_B DNA polymerase alpha ca 73.4 2.1 7.1E-05 35.2 2.9 38 71-108 22-59 (206)
418 3t7c_A Carveol dehydrogenase; 73.3 17 0.00059 30.9 9.0 78 177-260 27-129 (299)
419 3o26_A Salutaridine reductase; 73.0 14 0.00048 31.1 8.4 78 177-259 11-102 (311)
420 1v3u_A Leukotriene B4 12- hydr 72.6 9.4 0.00032 33.0 7.3 47 171-219 139-188 (333)
421 2rhc_B Actinorhodin polyketide 72.6 19 0.00063 30.2 9.0 77 177-259 21-110 (277)
422 3r1i_A Short-chain type dehydr 72.4 10 0.00035 32.0 7.3 79 177-261 31-122 (276)
423 1zem_A Xylitol dehydrogenase; 72.2 19 0.00065 29.8 8.9 77 177-259 6-95 (262)
424 3gms_A Putative NADPH:quinone 72.0 5.4 0.00018 34.8 5.5 96 168-276 135-244 (340)
425 3nyw_A Putative oxidoreductase 71.9 20 0.0007 29.5 9.0 80 177-259 6-98 (250)
426 1h2b_A Alcohol dehydrogenase; 71.9 9.2 0.00031 33.6 7.1 47 173-219 182-229 (359)
427 3t4x_A Oxidoreductase, short c 71.8 16 0.00055 30.4 8.3 80 177-260 9-97 (267)
428 2cdc_A Glucose dehydrogenase g 71.6 13 0.00046 32.6 8.2 41 178-220 181-226 (366)
429 3pk0_A Short-chain dehydrogena 70.6 16 0.00056 30.3 8.1 79 177-260 9-100 (262)
430 2qhx_A Pteridine reductase 1; 70.4 20 0.00069 31.0 8.9 60 178-243 46-110 (328)
431 3ftp_A 3-oxoacyl-[acyl-carrier 70.3 15 0.0005 30.9 7.8 78 177-260 27-117 (270)
432 3m6i_A L-arabinitol 4-dehydrog 70.1 9.2 0.00031 33.6 6.7 50 171-220 173-223 (363)
433 2qq5_A DHRS1, dehydrogenase/re 69.8 16 0.00056 30.2 7.9 73 178-256 5-91 (260)
434 4ej6_A Putative zinc-binding d 69.8 11 0.00037 33.4 7.1 50 171-220 176-226 (370)
435 3tox_A Short chain dehydrogena 69.5 9 0.00031 32.4 6.3 77 177-259 7-96 (280)
436 3u50_C Telomerase-associated p 69.3 2.3 7.9E-05 33.9 2.2 30 68-107 39-68 (172)
437 4a17_Y RPL37A, 60S ribosomal p 69.2 1.5 5E-05 31.7 0.9 31 70-109 35-65 (103)
438 1twf_I B12.6, DNA-directed RNA 69.2 2.1 7.3E-05 32.0 1.9 39 70-113 3-41 (122)
439 3f9i_A 3-oxoacyl-[acyl-carrier 69.2 21 0.00072 29.1 8.4 76 176-260 12-96 (249)
440 3cxt_A Dehydrogenase with diff 69.0 21 0.00073 30.2 8.6 77 177-259 33-122 (291)
441 4ibo_A Gluconate dehydrogenase 68.9 9.9 0.00034 32.0 6.4 78 177-260 25-115 (271)
442 2eih_A Alcohol dehydrogenase; 68.7 12 0.00041 32.6 7.1 47 173-220 162-210 (343)
443 4a2c_A Galactitol-1-phosphate 68.6 14 0.00047 32.1 7.4 51 170-220 153-204 (346)
444 3h0g_I DNA-directed RNA polyme 68.6 4.6 0.00016 29.7 3.6 38 72-109 73-111 (113)
445 3lf2_A Short chain oxidoreduct 68.5 28 0.00095 28.8 9.1 80 177-260 7-99 (265)
446 4esj_A Type-2 restriction enzy 68.3 2.5 8.4E-05 35.3 2.2 35 70-110 33-68 (257)
447 6rxn_A Rubredoxin; electron tr 68.2 3.3 0.00011 25.3 2.3 36 69-106 2-38 (46)
448 1vj0_A Alcohol dehydrogenase, 68.2 12 0.0004 33.3 7.0 48 172-219 189-238 (380)
449 3oec_A Carveol dehydrogenase ( 67.8 25 0.00085 30.2 8.9 78 177-260 45-147 (317)
450 2zat_A Dehydrogenase/reductase 67.6 24 0.0008 29.1 8.4 76 178-259 14-102 (260)
451 4g65_A TRK system potassium up 67.6 5.9 0.0002 36.5 5.0 66 178-254 3-74 (461)
452 1geg_A Acetoin reductase; SDR 67.6 27 0.00093 28.7 8.8 76 178-259 2-90 (256)
453 1fmc_A 7 alpha-hydroxysteroid 67.4 20 0.00069 29.2 7.9 75 178-259 11-99 (255)
454 4iin_A 3-ketoacyl-acyl carrier 67.3 22 0.00076 29.5 8.3 78 177-260 28-119 (271)
455 4fs3_A Enoyl-[acyl-carrier-pro 67.2 22 0.00074 29.5 8.1 78 177-259 5-97 (256)
456 3ip1_A Alcohol dehydrogenase, 67.1 14 0.00048 33.0 7.4 47 174-220 210-257 (404)
457 1xkq_A Short-chain reductase f 67.1 21 0.00071 29.9 8.1 80 178-260 6-98 (280)
458 3s55_A Putative short-chain de 66.9 34 0.0012 28.5 9.4 78 177-260 9-111 (281)
459 1cyd_A Carbonyl reductase; sho 66.7 36 0.0012 27.4 9.4 73 177-259 6-87 (244)
460 2hcy_A Alcohol dehydrogenase 1 66.5 11 0.00036 33.0 6.3 44 174-219 166-212 (347)
461 2j3h_A NADP-dependent oxidored 66.3 12 0.00041 32.5 6.6 48 171-219 149-198 (345)
462 4dvj_A Putative zinc-dependent 65.7 9.6 0.00033 33.6 5.9 43 177-219 171-215 (363)
463 3l4b_C TRKA K+ channel protien 65.6 14 0.00048 29.7 6.5 65 180-255 2-72 (218)
464 1vl8_A Gluconate 5-dehydrogena 65.4 32 0.0011 28.6 8.9 77 177-259 20-110 (267)
465 3oid_A Enoyl-[acyl-carrier-pro 65.4 26 0.00088 29.0 8.3 77 178-260 4-94 (258)
466 1rjw_A ADH-HT, alcohol dehydro 65.2 16 0.00055 31.7 7.2 45 174-219 161-206 (339)
467 3h0g_L DNA-directed RNA polyme 65.2 5.1 0.00018 26.2 2.9 30 70-109 20-49 (63)
468 4dmm_A 3-oxoacyl-[acyl-carrier 65.1 25 0.00087 29.3 8.2 78 177-260 27-118 (269)
469 3ado_A Lambda-crystallin; L-gu 65.1 10 0.00036 33.1 5.8 43 178-222 6-50 (319)
470 3d3w_A L-xylulose reductase; u 65.0 41 0.0014 27.1 9.4 74 177-260 6-88 (244)
471 3qt1_I DNA-directed RNA polyme 64.9 5.5 0.00019 30.2 3.5 40 69-113 22-61 (133)
472 2uvd_A 3-oxoacyl-(acyl-carrier 64.8 28 0.00095 28.4 8.3 76 178-259 4-93 (246)
473 1wii_A Hypothetical UPF0222 pr 64.8 2 6.7E-05 30.0 0.8 37 70-110 22-59 (85)
474 3grk_A Enoyl-(acyl-carrier-pro 64.4 36 0.0012 28.8 9.2 76 177-259 30-120 (293)
475 3edm_A Short chain dehydrogena 64.3 25 0.00084 29.1 7.9 77 177-259 7-97 (259)
476 2h6e_A ADH-4, D-arabinose 1-de 64.2 12 0.00039 32.7 6.0 46 174-220 168-215 (344)
477 3ppi_A 3-hydroxyacyl-COA dehyd 64.1 27 0.00092 29.1 8.2 70 177-255 29-110 (281)
478 3k1f_M Transcription initiatio 64.1 4.2 0.00015 32.3 2.7 29 71-108 21-52 (197)
479 2b5w_A Glucose dehydrogenase; 63.8 11 0.00038 33.0 5.9 40 179-219 174-220 (357)
480 3rih_A Short chain dehydrogena 63.4 15 0.00052 31.3 6.5 79 177-260 40-131 (293)
481 1xq1_A Putative tropinone redu 63.3 29 0.00099 28.5 8.2 76 178-259 14-103 (266)
482 3rd5_A Mypaa.01249.C; ssgcid, 63.3 27 0.00094 29.3 8.2 75 176-259 14-97 (291)
483 3nx4_A Putative oxidoreductase 63.2 9.9 0.00034 32.7 5.3 40 180-220 149-190 (324)
484 1xu9_A Corticosteroid 11-beta- 63.2 27 0.00091 29.3 8.1 73 178-255 28-113 (286)
485 3av4_A DNA (cytosine-5)-methyl 63.1 20 0.00068 37.6 8.2 43 178-220 851-893 (1330)
486 1yxm_A Pecra, peroxisomal tran 63.1 37 0.0013 28.5 9.0 81 177-259 17-111 (303)
487 4fc7_A Peroxisomal 2,4-dienoyl 63.0 26 0.00088 29.3 7.9 79 177-260 26-117 (277)
488 3nzo_A UDP-N-acetylglucosamine 63.0 18 0.00061 32.3 7.2 83 178-262 35-126 (399)
489 1yb5_A Quinone oxidoreductase; 62.9 20 0.00067 31.4 7.3 47 171-219 164-213 (351)
490 4ayb_P DNA-directed RNA polyme 62.8 5.7 0.0002 24.2 2.5 30 70-106 2-31 (48)
491 1twf_I B12.6, DNA-directed RNA 62.6 5.5 0.00019 29.7 3.1 40 71-110 72-112 (122)
492 1iy8_A Levodione reductase; ox 62.6 42 0.0014 27.7 9.1 79 177-259 12-103 (267)
493 1xhl_A Short-chain dehydrogena 62.4 28 0.00097 29.5 8.1 80 177-259 25-117 (297)
494 4dry_A 3-oxoacyl-[acyl-carrier 62.3 18 0.00063 30.4 6.8 78 177-259 32-122 (281)
495 3tqh_A Quinone oxidoreductase; 62.3 23 0.00078 30.4 7.5 48 171-220 146-195 (321)
496 3a28_C L-2.3-butanediol dehydr 62.2 30 0.001 28.4 8.1 77 178-260 2-93 (258)
497 3ged_A Short-chain dehydrogena 62.2 24 0.00083 29.4 7.4 72 179-260 3-87 (247)
498 4eso_A Putative oxidoreductase 62.0 44 0.0015 27.4 9.1 75 177-260 7-94 (255)
499 2g1u_A Hypothetical protein TM 61.8 5.3 0.00018 30.4 3.0 69 176-255 17-91 (155)
500 1wma_A Carbonyl reductase [NAD 61.4 30 0.001 28.3 7.9 75 178-259 4-93 (276)
No 1
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.84 E-value=2.4e-20 Score=163.20 Aligned_cols=180 Identities=20% Similarity=0.267 Sum_probs=131.6
Q ss_pred eeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCCeeeeeccCCCCC--cCcCCchhhhhhcCcchhhhhHHH
Q 023034 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASGSKD--YGELMSPATEFFRMPFMSFIYERG 149 (288)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~~~~--y~~~~~~~~~~~~~~~~s~~~~~~ 149 (288)
+.||.|+..+... .+.+.|.+|+.++..++||++++....... ....... +.
T Consensus 3 ~~Cp~C~~~~~~~-----------~~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~~~~~~~----~~----------- 56 (269)
T 1p91_A 3 FSCPLCHQPLSRE-----------KNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEM----MQ----------- 56 (269)
T ss_dssp BBCTTTCCBCEEE-----------TTEEECTTCCEEEBCTTSCEECSCSSSSCSCCCSSSHHH----HH-----------
T ss_pred ccCCCCCccceeC-----------CCEEECCCCCcCCcCCCEEEEeecccccCCCCCCCCHHH----HH-----------
Confidence 7899999987653 257999999999999999999876432211 1111000 00
Q ss_pred HhhhhhcCCCCCcHHH--HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC
Q 023034 150 WRQNFVWGGFPGPEKE--FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF 227 (288)
Q Consensus 150 wr~~~~~~g~~~~~~~--~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~ 227 (288)
.+..+...+++.+... .+.+...+. .++.+|||||||+|.++..+++..+..+|+|+|+|+.|++.|+++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~------- 128 (269)
T 1p91_A 57 ARRAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR------- 128 (269)
T ss_dssp HHHHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH-------
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh-------
Confidence 1223333444433222 233333332 457899999999999999999985446999999999999999987
Q ss_pred CCCCEEEEEecCCCCCCCCCccceEEeccccccCCCccccc---ceEEEEecCcccHHHHHh
Q 023034 228 PKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGV---GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 228 ~~~~i~~~~~d~~~lp~~~~sfD~V~~~~vl~h~~d~~~~l---G~lvi~t~~~~~l~el~~ 286 (288)
..++.+..+|+..+++++++||+|++..+...+....+.| |.+++.++..+.+.++.+
T Consensus 129 -~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 189 (269)
T 1p91_A 129 -YPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKG 189 (269)
T ss_dssp -CTTSEEEECCTTSCSBCTTCEEEEEEESCCCCHHHHHHHEEEEEEEEEEEECTTTTHHHHT
T ss_pred -CCCcEEEEcchhhCCCCCCceeEEEEeCChhhHHHHHHhcCCCcEEEEEEcCHHHHHHHHH
Confidence 3567899999999999899999999988866665555566 999999999988888764
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.70 E-value=8.1e-17 Score=139.95 Aligned_cols=107 Identities=22% Similarity=0.343 Sum_probs=93.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...+ ..++.++++|+..+|+++
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNG---HQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCC-CCCSCT
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEecHHhCCCCC
Confidence 5566667767789999999999999999999886 99999999999999999987762 357999999999999999
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++|+..++ |.+++.++..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 9999999999999999998877 8888876543
No 3
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.70 E-value=4.7e-18 Score=157.95 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=84.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ +.......+...++..+++++
T Consensus 97 ~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 97 RDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK-----GIRVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT-----TCCEECSCCSHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc-----CCCcceeeechhhHhhcccCC
Confidence 5566667766788999999999999999999877 999999999999999875 111111123334555667778
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCcc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~ 279 (288)
++||+|++.++++|++++..++ |.+++.++...
T Consensus 170 ~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 212 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLG 212 (416)
T ss_dssp CCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred CCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 9999999999999999998888 89998876543
No 4
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.66 E-value=6.8e-16 Score=132.67 Aligned_cols=107 Identities=22% Similarity=0.311 Sum_probs=94.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.+++++...+ ..++.++++|++.+|+++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcC---CCCeEEEecccccCCCCC
Confidence 3456667777899999999999999999999886 99999999999999999987762 357999999999999999
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++++..++ |.+++.++..
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 9999999999999999988777 8888877654
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.66 E-value=1.4e-15 Score=134.68 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=94.2
Q ss_pred HHHHHhhc----CCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCC
Q 023034 166 FELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (288)
Q Consensus 166 ~~~l~~~l----~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~ 240 (288)
.+.+...+ ...++.+|||||||+|.++..+++. +. +|+|+|+|+.|++.|++++...+ ...++.++++|+.
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~ 142 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV--SIDCLNIAPVQNKRNEEYNNQAG--LADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHHT--CTTTEEEEECCTT
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEEcCcc
Confidence 45566666 6667899999999999999999987 44 99999999999999999987762 2357999999999
Q ss_pred CCCCCCCccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 241 RLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 241 ~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++|+++++||+|++..+++|++++..++ |.+++.++..
T Consensus 143 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp SCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 9999999999999999999999987777 8999888653
No 6
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.66 E-value=2.1e-16 Score=137.89 Aligned_cols=103 Identities=23% Similarity=0.241 Sum_probs=86.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l 242 (288)
...++.|.++... +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ ..++.++++|++++
T Consensus 27 ~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~~ 93 (257)
T 4hg2_A 27 RALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAEDT 93 (257)
T ss_dssp HHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTCC
T ss_pred HHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhhh
Confidence 3445566666543 67999999999999999999886 99999999999998864 36899999999999
Q ss_pred CCCCCccceEEeccccccCCCccccc----------ceEEEEecCcc
Q 023034 243 PFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 243 p~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~ 279 (288)
|+++++||+|++..++||+ ++.+++ |.|++.++...
T Consensus 94 ~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 94 GLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999999999999999877 466666 88988887643
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=1.8e-15 Score=130.88 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=94.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l 242 (288)
....+.+...+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|+++++..+ ...++.++++|+.++
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG--VSERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCCTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECChHhC
Confidence 3445667777777788999999999999999999874 2499999999999999999987761 235799999999999
Q ss_pred CCCCCccceEEeccccccCCCccccc----------ceEEEEec
Q 023034 243 PFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTL 276 (288)
Q Consensus 243 p~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~ 276 (288)
++ +++||+|++..+++|++++..++ |.+++.++
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 88 88999999999999999987777 88888764
No 8
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.65 E-value=4e-16 Score=131.14 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=76.7
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-----C----CCCCCEEEEEecCC
Q 023034 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----N----FPKENFLLVRADIS 240 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-----g----~~~~~i~~~~~d~~ 240 (288)
...+...++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++..... + ....++.++++|+.
T Consensus 15 ~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 15 WSSLNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp HHHHCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HHhcccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 3444555688999999999999999999986 99999999999999998864310 0 00357999999999
Q ss_pred CCCCCC-CccceEEeccccccCCCc
Q 023034 241 RLPFAS-SSIDAVHAGAAIHCWSSP 264 (288)
Q Consensus 241 ~lp~~~-~sfD~V~~~~vl~h~~d~ 264 (288)
++++.+ ++||+|++..+++|++..
T Consensus 93 ~l~~~~~~~fD~v~~~~~l~~l~~~ 117 (203)
T 1pjz_A 93 ALTARDIGHCAAFYDRAAMIALPAD 117 (203)
T ss_dssp SSTHHHHHSEEEEEEESCGGGSCHH
T ss_pred cCCcccCCCEEEEEECcchhhCCHH
Confidence 999875 899999999999999754
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.65 E-value=1.1e-15 Score=133.63 Aligned_cols=99 Identities=13% Similarity=0.209 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSG--LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~--~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~ 253 (288)
.++.+|||||||+|.++..+++.. ++.+|+|+|+|+.|++.|++++...+ ...++.++++|+.++|++ .||+|+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~~~D~~~~~~~--~~d~v~ 144 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVIEGDIRDIAIE--NASMVV 144 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCTTTCCCC--SEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEeeccccccccc--ccccce
Confidence 458999999999999999999874 34699999999999999999988762 246899999999999874 599999
Q ss_pred eccccccCCCccc--cc----------ceEEEEecCc
Q 023034 254 AGAAIHCWSSPST--GV----------GVFFQVTLII 278 (288)
Q Consensus 254 ~~~vl~h~~d~~~--~l----------G~lvi~t~~~ 278 (288)
+..+++|++++++ ++ |.|+++....
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 9999999986643 33 8888887644
No 10
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.64 E-value=2.3e-15 Score=131.47 Aligned_cols=109 Identities=21% Similarity=0.281 Sum_probs=94.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+ ...++.++.+|+.++|+++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG--LANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECccccCCCCC
Confidence 556667777778999999999999999998874 3599999999999999999987751 2357999999999999999
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++++..++ |.+++.++..
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 9999999999999999987777 8899888653
No 11
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.64 E-value=1.2e-15 Score=128.82 Aligned_cols=109 Identities=17% Similarity=0.255 Sum_probs=94.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
+.+...+...++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.|++.|++++...+ ..++.++.+|+..++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---LKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEecccccCCCC
Confidence 445566666778899999999999999999986 55699999999999999999988762 34799999999999999
Q ss_pred CCccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
+++||+|++..+++|++++..++ |.+++.++..
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 99999999999999999988777 8898887653
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.63 E-value=3.5e-15 Score=130.12 Aligned_cols=112 Identities=16% Similarity=0.219 Sum_probs=94.2
Q ss_pred cHHHHHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCC
Q 023034 162 PEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (288)
Q Consensus 162 ~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~ 240 (288)
.......+...+. ..++.+|||||||+|.++..+++. +..+|+|+|+|+.|++.|+++++..+ ...++.++++|+.
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~ 106 (267)
T 3kkz_A 30 SPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG--LQNRVTGIVGSMD 106 (267)
T ss_dssp CHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTT
T ss_pred CHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC--CCcCcEEEEcChh
Confidence 3444555666665 567899999999999999999998 44699999999999999999988762 2356999999999
Q ss_pred CCCCCCCccceEEeccccccCCCccccc----------ceEEEEecC
Q 023034 241 RLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 241 ~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
++++++++||+|++..+++|+ ++..++ |.+++.++.
T Consensus 107 ~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 107 DLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp SCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred hCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 999989999999999999999 776666 899888764
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.63 E-value=1.1e-15 Score=132.60 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=94.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l 242 (288)
....+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|++++... .++.++++|+.++
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTK 114 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccC
Confidence 3446777777777788999999999999999999973 249999999999999999874332 6899999999999
Q ss_pred CCCCCccceEEeccccccC--CCccccc----------ceEEEEecCccc
Q 023034 243 PFASSSIDAVHAGAAIHCW--SSPSTGV----------GVFFQVTLIIHV 280 (288)
Q Consensus 243 p~~~~sfD~V~~~~vl~h~--~d~~~~l----------G~lvi~t~~~~~ 280 (288)
|+++++||+|++..+++|+ +++..++ |.+++.++....
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999999999999 6777666 899998865443
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.63 E-value=3.8e-15 Score=125.20 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=92.2
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++ +|||||||+|.++..+++. +..+++|+|+|+.+++.|++++...+ ...++.++++|+.+++++
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN--LNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECBTTBCSSC
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc--ccCceEEEEcCHHHCCCC
Confidence 4556666665555 9999999999999999998 44699999999999999999988762 235799999999999999
Q ss_pred CCccceEEeccccccCCCccccc----------ceEEEEecC
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
+++||+|++..+++|++++..++ |.+++.+..
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 99999999999999999988877 888887643
No 15
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.62 E-value=3.6e-15 Score=127.26 Aligned_cols=110 Identities=20% Similarity=0.274 Sum_probs=92.5
Q ss_pred HHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 166 ~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
.+.+...+. ..++.+|||||||+|.++..+++..+..+++|+|+|+.|++.|++++... .++.++++|+.++++
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYSKYDF 106 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTTTCCC
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchhccCC
Confidence 345555554 45678999999999999999999976679999999999999999986654 389999999999988
Q ss_pred CCCccceEEeccccccCCCccc--cc----------ceEEEEecCcccH
Q 023034 245 ASSSIDAVHAGAAIHCWSSPST--GV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~~~--~l----------G~lvi~t~~~~~l 281 (288)
+ ++||+|++..+++|++++.. ++ |.+++.++.....
T Consensus 107 ~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 154 (234)
T 3dtn_A 107 E-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGET 154 (234)
T ss_dssp C-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred C-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCC
Confidence 7 89999999999999987763 44 9999988765543
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.62 E-value=5.3e-15 Score=127.91 Aligned_cols=112 Identities=15% Similarity=0.236 Sum_probs=93.8
Q ss_pred CcHHHHHHHHhhc-CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecC
Q 023034 161 GPEKEFELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 239 (288)
Q Consensus 161 ~~~~~~~~l~~~l-~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~ 239 (288)
........+...+ ...++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|++++...+ ...++.++++|+
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~ 105 (257)
T 3f4k_A 29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKAN--CADRVKGITGSM 105 (257)
T ss_dssp CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCT
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECCh
Confidence 3344455566666 455688999999999999999999976 499999999999999999988762 234599999999
Q ss_pred CCCCCCCCccceEEeccccccCCCccccc----------ceEEEEec
Q 023034 240 SRLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTL 276 (288)
Q Consensus 240 ~~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~ 276 (288)
..+|+++++||+|++..+++|+ ++..++ |.+++.++
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 106 DNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999999999999999999999 676666 88988874
No 17
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.62 E-value=1.4e-15 Score=128.34 Aligned_cols=107 Identities=11% Similarity=0.153 Sum_probs=90.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++... .++.++++|+.+++ ++
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC-CS
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC-CC
Confidence 3444456666788999999999999999999875 9999999999999999987654 48999999999988 67
Q ss_pred CccceEEeccccccCCCccc---cc----------ceEEEEecCcccH
Q 023034 247 SSIDAVHAGAAIHCWSSPST---GV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~---~l----------G~lvi~t~~~~~l 281 (288)
++||+|++..+++|++++.. ++ |.++++++.....
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 160 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATC 160 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcc
Confidence 89999999999999998743 23 8999988765543
No 18
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.62 E-value=2e-15 Score=130.53 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=91.9
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+...+...++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.|++++. ..++.++++|+..+++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 4566777766789999999999999999999875 499999999999999998743 358999999999999989
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++++..++ |.+++.++.+
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 9999999999999999988877 8888886554
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.62 E-value=3.6e-15 Score=130.56 Aligned_cols=107 Identities=23% Similarity=0.342 Sum_probs=93.0
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (288)
.+.......++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.|++++...+ ..++.++.+|+..++++++
T Consensus 28 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~ 104 (276)
T 3mgg_A 28 LLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG---IKNVKFLQANIFSLPFEDS 104 (276)
T ss_dssp HHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGCCSCTT
T ss_pred HHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEcccccCCCCCC
Confidence 3444444567899999999999999999999777799999999999999999988762 3579999999999999999
Q ss_pred ccceEEeccccccCCCccccc----------ceEEEEecC
Q 023034 248 SIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 248 sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
+||+|++..+++|++++..++ |.+++.+..
T Consensus 105 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 999999999999999998777 888887643
No 20
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.61 E-value=1.3e-15 Score=134.16 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=90.8
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FAS 246 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~ 246 (288)
.+...+... +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...+ ...++.++++|+.+++ +.+
T Consensus 60 ~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKG--VSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-C--CGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCcceEEEEcCHHHhhhhcC
Confidence 344444433 67999999999999999999865 99999999999999999987751 1267999999999987 778
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCccc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHV 280 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~ 280 (288)
++||+|++..+++|++++..++ |.+++.++....
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 9999999999999999998877 899998876544
No 21
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=2.2e-15 Score=127.37 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=88.5
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC---CCCEEEEEecCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLP 243 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~---~~~i~~~~~d~~~lp 243 (288)
+.+.+.+...++.+|||||||+|.++..+++.++..+|+|+|+|+.|++.|++++...+ .. ..++.++++|+..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDR-LPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGG-SCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhc-cccccCcceEEEeCcccccc
Confidence 44455554456789999999999999999998866799999999999999999976541 10 127999999998888
Q ss_pred CCCCccceEEeccccccCCCc--cccc---------ceEEEEecCc
Q 023034 244 FASSSIDAVHAGAAIHCWSSP--STGV---------GVFFQVTLII 278 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h~~d~--~~~l---------G~lvi~t~~~ 278 (288)
+.+++||+|++..+++|++++ ..++ |.+++.++..
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 888999999999999999876 3444 5466665543
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.61 E-value=3e-15 Score=126.48 Aligned_cols=101 Identities=20% Similarity=0.236 Sum_probs=83.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC---CCCEEEEEecCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLP 243 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~---~~~i~~~~~d~~~lp 243 (288)
+.+.+.+...++.+|||||||+|.++..+++.++..+|+|+|+|+.|++.|++++... +.. ..++.++++|+..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 19 NGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL-RLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC-CCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh-cCCcccCcceEEEeCCccccc
Confidence 4455555545678999999999999999999886679999999999999999998654 110 127999999998888
Q ss_pred CCCCccceEEeccccccCCCc--cccc
Q 023034 244 FASSSIDAVHAGAAIHCWSSP--STGV 268 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h~~d~--~~~l 268 (288)
..+++||+|++..+++|++++ ..++
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l 124 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFE 124 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHH
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHH
Confidence 878899999999999999876 4444
No 23
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.61 E-value=4.6e-15 Score=128.99 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=80.4
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHh---------cCC-----CCCCCEEEEEecC
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---------ESN-----FPKENFLLVRADI 239 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~---------~~g-----~~~~~i~~~~~d~ 239 (288)
...++.+|||+|||+|..+..|++.|. +|+|+|+|+.|++.|+++... .++ ....++.++++|+
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 334578999999999999999999987 999999999999999887531 000 0135799999999
Q ss_pred CCCCCCC-CccceEEeccccccCCCccc--cc----------ceEEEEec
Q 023034 240 SRLPFAS-SSIDAVHAGAAIHCWSSPST--GV----------GVFFQVTL 276 (288)
Q Consensus 240 ~~lp~~~-~sfD~V~~~~vl~h~~d~~~--~l----------G~lvi~t~ 276 (288)
.++++.+ ++||+|++..+++|++.... ++ |++++.++
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 9998865 89999999999999976532 22 88766553
No 24
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=3.4e-15 Score=131.12 Aligned_cols=106 Identities=23% Similarity=0.341 Sum_probs=90.0
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (288)
.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++ ..++.+.++|+..+++ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQN--------YPHLHFDVADARNFRV-DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHH--------CTTSCEEECCTTTCCC-SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhh--------CCCCEEEECChhhCCc-CC
Confidence 34555666678899999999999999999854 4999999999999999987 3578899999999987 58
Q ss_pred ccceEEeccccccCCCccccc----------ceEEEEecCcccHHHH
Q 023034 248 SIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDL 284 (288)
Q Consensus 248 sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el 284 (288)
+||+|++..+++|++++..++ |.+++.++....+.++
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 163 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYI 163 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHH
Confidence 999999999999999998877 8999988876654433
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.60 E-value=3.4e-15 Score=127.90 Aligned_cols=103 Identities=22% Similarity=0.387 Sum_probs=89.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+..++. ++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++. ...++.++++|+.++++++
T Consensus 45 ~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~~~~ 114 (242)
T 3l8d_A 45 PFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLPFEN 114 (242)
T ss_dssp HHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCSSCT
T ss_pred HHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCCCCC
Confidence 45555555 478999999999999999999876 9999999999999999863 1468999999999999989
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCcc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~ 279 (288)
++||+|++..+++|++++..++ |.+++.++...
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 9999999999999999998777 89999886553
No 26
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.60 E-value=9.6e-15 Score=130.48 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=93.3
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 167 ~~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
+.+.+.+. ..++.+|||||||+|.++..+++. +. +|+|+|+|+.|++.|++++...+ ...++.++.+|+.++|+
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~ 181 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS--RVEGVTLSAAQADFGNRRARELR--IDDHVRSRVCNMLDTPF 181 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhcCCC
Confidence 45666776 667899999999999999999988 54 99999999999999999988762 23579999999999999
Q ss_pred CCCccceEEeccccccCCCccccc----------ceEEEEecCccc
Q 023034 245 ASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHV 280 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~ 280 (288)
++++||+|++..+++|+ ++..++ |.+++.++....
T Consensus 182 ~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp CTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred CCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 99999999999999999 566666 999998865443
No 27
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=5.9e-15 Score=127.65 Aligned_cols=103 Identities=16% Similarity=0.128 Sum_probs=89.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+...+...++.+|||||||+|.++..+++..+..+|+|+|+|+.|++.++++ ..++.++.+|+.+++ ++
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-CS
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-cc
Confidence 345666666678899999999999999999985556999999999999999987 357899999999988 78
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++++..++ |.+++.++..
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 8999999999999999987776 8999888643
No 28
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.3e-14 Score=128.65 Aligned_cols=112 Identities=16% Similarity=0.196 Sum_probs=92.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
...++.+..+.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+.|++.|+++++.. +....++.++++|+++
T Consensus 23 ~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 23 SDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEECCTTC
T ss_pred HHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEEcCHHh
Confidence 334455655544 468899999999999999999764 5679999999999999999998764 1225789999999999
Q ss_pred CCCCC------CccceEEeccccccCCCccccc----------ceEEEEecC
Q 023034 242 LPFAS------SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 242 lp~~~------~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
+++.+ ++||+|++..+++|+ ++..++ |.+++.++.
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99887 899999999999999 888877 888885543
No 29
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=3.9e-15 Score=125.75 Aligned_cols=103 Identities=17% Similarity=0.222 Sum_probs=87.0
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (288)
.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.|++.+++++. .++.++.+|+.+++++ +
T Consensus 36 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~ 105 (220)
T 3hnr_A 36 DILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-T 105 (220)
T ss_dssp HHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-S
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-C
Confidence 344444444688999999999999999999865 99999999999999998732 3788999999999987 9
Q ss_pred ccceEEeccccccCCCccc--cc----------ceEEEEecCccc
Q 023034 248 SIDAVHAGAAIHCWSSPST--GV----------GVFFQVTLIIHV 280 (288)
Q Consensus 248 sfD~V~~~~vl~h~~d~~~--~l----------G~lvi~t~~~~~ 280 (288)
+||+|++..+++|++++.. ++ |.+++.++....
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 9999999999999999876 55 999998765444
No 30
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.59 E-value=8.8e-15 Score=126.73 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=83.8
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEE
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~ 253 (288)
...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++... ..++.++.+|+.++++++++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAGV----DRKVQVVQADARAIPLPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTTS----CTTEEEEESCTTSCCSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc----CCceEEEEcccccCCCCCCCeeEEE
Confidence 345688999999999999999998865 9999999999999999987222 4689999999999999899999999
Q ss_pred eccccccCCCccccc----------ceEEEE
Q 023034 254 AGAAIHCWSSPSTGV----------GVFFQV 274 (288)
Q Consensus 254 ~~~vl~h~~d~~~~l----------G~lvi~ 274 (288)
+..+++|++++..++ |.+++.
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999999999988777 777776
No 31
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=3.9e-15 Score=129.67 Aligned_cols=103 Identities=25% Similarity=0.289 Sum_probs=89.7
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ .++.++++|++++|++
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~~~~~ 91 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL--FVYAVEPSIVMRQQAVVH---------PQVEWFTGYAENLALP 91 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC--EEEEECSCHHHHHSSCCC---------TTEEEECCCTTSCCSC
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC--EEEEEeCCHHHHHHHHhc---------cCCEEEECchhhCCCC
Confidence 35566677666789999999999999999998654 999999999999988763 3899999999999999
Q ss_pred CCccceEEeccccccCCCccccc---------ceEEEEecCcc
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV---------GVFFQVTLIIH 279 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l---------G~lvi~t~~~~ 279 (288)
+++||+|++..+++|++++..++ |.+++.++...
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkgG~~~~~~~~~~ 134 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIRDGTIVLLTFDIR 134 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBCSSCEEEEEECGG
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhCCcEEEEEEcCCc
Confidence 99999999999999999988877 77888887654
No 32
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.59 E-value=1.3e-14 Score=121.87 Aligned_cols=101 Identities=23% Similarity=0.227 Sum_probs=85.7
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (288)
.+...+. ++.+|||||||+|.++..+ +. .+++|+|+|+.|++.++++. .++.++++|+.++|++++
T Consensus 29 ~l~~~~~--~~~~vLdiG~G~G~~~~~l---~~-~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~ 94 (211)
T 2gs9_A 29 ALKGLLP--PGESLLEVGAGTGYWLRRL---PY-PQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGE 94 (211)
T ss_dssp HHHTTCC--CCSEEEEETCTTCHHHHHC---CC-SEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSS
T ss_pred HHHHhcC--CCCeEEEECCCCCHhHHhC---CC-CeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCC
Confidence 3444443 6889999999999999888 21 28999999999999999872 578899999999999899
Q ss_pred ccceEEeccccccCCCccccc----------ceEEEEecCcccHH
Q 023034 248 SIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVE 282 (288)
Q Consensus 248 sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~ 282 (288)
+||+|++..+++|++++..++ |.+++.++...+..
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 139 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSPW 139 (211)
T ss_dssp CEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSHH
T ss_pred cEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCcH
Confidence 999999999999999988777 99999998876653
No 33
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=2.6e-15 Score=125.42 Aligned_cols=92 Identities=13% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEeccc
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~v 257 (288)
+.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ ..++.++++|+.++++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 77999999999999999999876 999999999999999987 45789999999999998999999999999
Q ss_pred cccCC--Cccccc----------ceEEEEecCcc
Q 023034 258 IHCWS--SPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 258 l~h~~--d~~~~l----------G~lvi~t~~~~ 279 (288)
++|++ ++..++ |.+++.++...
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 99997 666666 89998886654
No 34
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.58 E-value=2e-14 Score=127.67 Aligned_cols=110 Identities=17% Similarity=0.130 Sum_probs=91.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++...+ ...++.++.+|+.++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD--SPRRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC--CSSCEEEEECCGGGC---
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECCHHHc---
Confidence 34566777777889999999999999999999832 499999999999999999988762 234799999999876
Q ss_pred CCccceEEeccccccCCCcc---------ccc----------ceEEEEecCcccH
Q 023034 246 SSSIDAVHAGAAIHCWSSPS---------TGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~---------~~l----------G~lvi~t~~~~~l 281 (288)
+++||+|++..+++|+++|+ .++ |.+++.++.....
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 189 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDK 189 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCH
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCc
Confidence 68999999999999998872 333 9999998865443
No 35
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.58 E-value=1.6e-14 Score=119.77 Aligned_cols=103 Identities=20% Similarity=0.220 Sum_probs=85.9
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (288)
.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++...+ ..++.++.+|+..+++ ++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGCCC-CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhCCC-CC
Confidence 344555555678999999999999999999865 99999999999999999987762 3479999999999888 88
Q ss_pred ccceEEeccccccCC--Cccccc----------ceEEEEec
Q 023034 248 SIDAVHAGAAIHCWS--SPSTGV----------GVFFQVTL 276 (288)
Q Consensus 248 sfD~V~~~~vl~h~~--d~~~~l----------G~lvi~t~ 276 (288)
+||+|++..+++|++ ++..++ |.+++.++
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 999999999999998 555555 88777653
No 36
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.58 E-value=6.4e-15 Score=126.18 Aligned_cols=97 Identities=12% Similarity=0.161 Sum_probs=83.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|++++. .++.++++|+.++ +++++||+|++.+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~~ 111 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLTH 111 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEES
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEhh
Confidence 467899999999999999999887 89999999999999998731 1799999999887 4678999999999
Q ss_pred ccccCCCcc--------ccc---ceEEEEecCcccHHH
Q 023034 257 AIHCWSSPS--------TGV---GVFFQVTLIIHVVED 283 (288)
Q Consensus 257 vl~h~~d~~--------~~l---G~lvi~t~~~~~l~e 283 (288)
+++|++++. +.| |.+++.++....+..
T Consensus 112 ~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~ 149 (250)
T 2p7i_A 112 VLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSR 149 (250)
T ss_dssp CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHH
T ss_pred HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHH
Confidence 999999985 444 999999987765543
No 37
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=3.4e-14 Score=118.92 Aligned_cols=119 Identities=14% Similarity=0.000 Sum_probs=95.9
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
+......+...+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.|++++... + ..++.++.+|+.+
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~ 101 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF-V--ARNVTLVEAFAPE 101 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH-T--CTTEEEEECCTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh-C--CCcEEEEeCChhh
Confidence 333345667777777899999999999999999999987779999999999999999998876 2 3689999999976
Q ss_pred CCCCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 242 LPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 242 lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
.....++||+|++..+++ ++..++ |.+++.+....+..++.+
T Consensus 102 ~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 153 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVE 153 (204)
T ss_dssp TCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHH
T ss_pred hhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHH
Confidence 544457899999998876 344333 999998888777666654
No 38
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=1.6e-14 Score=127.31 Aligned_cols=99 Identities=17% Similarity=0.193 Sum_probs=87.7
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceE
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAV 252 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V 252 (288)
...++.+|||||||+|.++..+++..+ ..+|+|+|+|+.|++.|++++... ..++.++++|+.++++ +++||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~-~~~fD~v 93 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATEIEL-NDKYDIA 93 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTTCCC-SSCEEEE
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhhcCc-CCCeeEE
Confidence 455688999999999999999999865 369999999999999999998776 3489999999999988 4699999
Q ss_pred EeccccccCCCccccc----------ceEEEEecC
Q 023034 253 HAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 253 ~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
++..+++|++++..++ |.+++..+.
T Consensus 94 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 94 ICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999999999998777 888888776
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.57 E-value=9.8e-15 Score=124.95 Aligned_cols=105 Identities=29% Similarity=0.362 Sum_probs=89.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+...+...++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|+++... .++.++++|+..+++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCCT
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCCC
Confidence 4456666666788999999999999999998854 4899999999999999986422 37899999999998888
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++++..++ |.+++.++.+
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 9999999999999999988777 8888887543
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.56 E-value=2.1e-14 Score=122.04 Aligned_cols=106 Identities=21% Similarity=0.301 Sum_probs=88.9
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC---CCCEEEEEecCCCCCCC
Q 023034 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLPFA 245 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~---~~~i~~~~~d~~~lp~~ 245 (288)
+...+. ++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++... +.. ..++.++.+|+..++++
T Consensus 24 ~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~ 98 (235)
T 3sm3_A 24 IHNYLQ--EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSP-GLNQKTGGKAEFKVENASSLSFH 98 (235)
T ss_dssp HHHHCC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCC-SCCSSSSCEEEEEECCTTSCCSC
T ss_pred HHHhCC--CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhc-CCccccCcceEEEEecccccCCC
Confidence 344444 478999999999999999999865 9999999999999999987665 111 13689999999999998
Q ss_pred CCccceEEeccccccCCCcc---ccc----------ceEEEEecCcc
Q 023034 246 SSSIDAVHAGAAIHCWSSPS---TGV----------GVFFQVTLIIH 279 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~---~~l----------G~lvi~t~~~~ 279 (288)
+++||+|++..+++|++++. .++ |.+++.++...
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 99999999999999999987 555 99999887543
No 41
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.56 E-value=1.3e-14 Score=126.86 Aligned_cols=110 Identities=15% Similarity=0.190 Sum_probs=91.8
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHH------HHHHHHHHHHhcCCCCCCCEEEEEec-
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSEN------MLKQCYEFVQQESNFPKENFLLVRAD- 238 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~------~l~~A~~~~~~~~g~~~~~i~~~~~d- 238 (288)
..+.+.+...++.+|||||||+|.++..+++. ++..+|+|+|+|+. |++.|++++...+ ...++.++.+|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--LGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--TGGGEEEECSCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--CCCceEEEECCh
Confidence 45566666777899999999999999999988 45569999999998 9999999987651 12579999998
Q ss_pred --CCCCCCCCCccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 239 --ISRLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 239 --~~~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
...+|+++++||+|++..+++|++++..++ |.+++.++..
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 556778889999999999999999987754 8899887653
No 42
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.56 E-value=3.8e-14 Score=118.79 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=88.0
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+..++ .++.+|||||||+|.++..+++.++. +++|+|+|+.+++.|++++.. ..++.++++|+..++++
T Consensus 33 ~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 33 RALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLDFP 104 (215)
T ss_dssp HHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCCSC
T ss_pred HHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCCCC
Confidence 34444554 34789999999999999999998753 899999999999999998653 25789999999999988
Q ss_pred CCccceEEeccccccCC---------------Cccccc----------ceEEEEecCcccH
Q 023034 246 SSSIDAVHAGAAIHCWS---------------SPSTGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~---------------d~~~~l----------G~lvi~t~~~~~l 281 (288)
+++||+|++..+++|+. ++..++ |.+++.++....+
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~ 165 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHF 165 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHH
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHH
Confidence 89999999999998775 333444 9999999877543
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.55 E-value=5.1e-15 Score=120.16 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=83.9
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCcc
Q 023034 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 249 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sf 249 (288)
.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.+..+| +++++++|
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~ 76 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSV 76 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCce
Confidence 3344455688999999999999999999885 999999999999999987 3578899998 77788999
Q ss_pred ceEEeccccccCCCccccc----------ceEEEEecCcc
Q 023034 250 DAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~ 279 (288)
|+|++..+++|++++..++ |.+++.++...
T Consensus 77 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 77 DFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 9999999999999988777 99999877543
No 44
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.55 E-value=2e-14 Score=122.89 Aligned_cols=107 Identities=19% Similarity=0.185 Sum_probs=84.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
+..+...+... +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...+ ...++.++++|+.+++ +
T Consensus 56 l~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~-~ 129 (235)
T 3lcc_A 56 IVHLVDTSSLP-LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSP--KAEYFSFVKEDVFTWR-P 129 (235)
T ss_dssp HHHHHHTTCSC-CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSG--GGGGEEEECCCTTTCC-C
T ss_pred HHHHHHhcCCC-CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccC--CCcceEEEECchhcCC-C
Confidence 33344433333 45999999999999999987665 99999999999999999976531 1357999999999987 4
Q ss_pred CCccceEEeccccccCC--Cccccc----------ceEEEEecCc
Q 023034 246 SSSIDAVHAGAAIHCWS--SPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~--d~~~~l----------G~lvi~t~~~ 278 (288)
+++||+|++..+++|++ ++..++ |.+++..+..
T Consensus 130 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 130 TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 56999999999999998 555555 8888877643
No 45
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.55 E-value=2.8e-14 Score=116.27 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=89.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF 244 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~ 244 (288)
...+...+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++++...+ ...++ ++.+|+.+ ++.
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG--VSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT--CTTSE-EEECCTTGGGGG
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC--CCCCE-EEecchHhhhhc
Confidence 345566667777889999999999999999998666799999999999999999988762 12378 88888854 343
Q ss_pred CCCccceEEeccccccC---CCccccc---ceEEEEecCcccHHHHHh
Q 023034 245 ASSSIDAVHAGAAIHCW---SSPSTGV---GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~---~d~~~~l---G~lvi~t~~~~~l~el~~ 286 (288)
.+++||+|++..+++|. ....+.| |.+++.++......++.+
T Consensus 91 ~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 138 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVTVESEQMLWA 138 (178)
T ss_dssp CCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECSHHHHHHHHH
T ss_pred cCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeeccccHHHHHH
Confidence 33899999999999881 1111222 999999988777766654
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.54 E-value=3e-14 Score=119.83 Aligned_cols=101 Identities=19% Similarity=0.182 Sum_probs=84.4
Q ss_pred HHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 168 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
.+...+. ..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++. + ..++.++++|+.++ +++
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~-----~--~~~~~~~~~d~~~~-~~~ 105 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRH-----G--LDNVEFRQQDLFDW-TPD 105 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGG-----C--CTTEEEEECCTTSC-CCS
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhc-----C--CCCeEEEecccccC-CCC
Confidence 3444443 45578999999999999999999965 999999999999999882 1 36899999999988 778
Q ss_pred CccceEEeccccccCCCc--cccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSP--STGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~--~~~l----------G~lvi~t~~~ 278 (288)
++||+|++..+++|++++ ..++ |.+++.++..
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 999999999999999986 4444 8998887754
No 47
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.54 E-value=1.2e-14 Score=124.78 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~ 253 (288)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ +.++.+|+.+. ++++++||+|+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCeeEEE
Confidence 4578999999999999999999876 899999999999999862 67888888775 78889999999
Q ss_pred eccccccCCCc--cccc----------ceEEEEecCcccHHHHHh
Q 023034 254 AGAAIHCWSSP--STGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 254 ~~~vl~h~~d~--~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+..+++|++++ ..++ |.+++.++....+.++.+
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 151 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLIN 151 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHH
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHH
Confidence 99999999966 5555 999999998888776654
No 48
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.54 E-value=9.6e-15 Score=128.88 Aligned_cols=116 Identities=18% Similarity=0.228 Sum_probs=93.4
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCCCCEEEEEecCCCCC-
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-FPKENFLLVRADISRLP- 243 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g-~~~~~i~~~~~d~~~lp- 243 (288)
.+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...+. ....++.+..+|+..++
T Consensus 46 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 46 KAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 34555555555688999999999999999999977 999999999999999988643210 01246788999998888
Q ss_pred --CCCCccceEEec-cccccCCC-------ccccc----------ceEEEEecCcccHHH
Q 023034 244 --FASSSIDAVHAG-AAIHCWSS-------PSTGV----------GVFFQVTLIIHVVED 283 (288)
Q Consensus 244 --~~~~sfD~V~~~-~vl~h~~d-------~~~~l----------G~lvi~t~~~~~l~e 283 (288)
+++++||+|++. .+++|+++ +..++ |.+++.++..+.+.+
T Consensus 124 ~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 183 (293)
T 3thr_A 124 DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILS 183 (293)
T ss_dssp HSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH
T ss_pred ccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhh
Confidence 788999999998 89999999 66666 899998887665554
No 49
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.54 E-value=2.4e-14 Score=119.85 Aligned_cols=97 Identities=22% Similarity=0.341 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCccchH-HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEe
Q 023034 176 VLGGNIIDASCGSGLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~-~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~ 254 (288)
.++.+|||+|||+|.+ ...+++.+. +|+|+|+|+.|++.|++++... ..++.++++|+.++++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHH----TCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEECchhhCCCCCCceeEEEE
Confidence 3478999999999997 555555554 9999999999999999998776 35788999999999998899999999
Q ss_pred ccccccC--CCccccc----------ceEEEEecCc
Q 023034 255 GAAIHCW--SSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 255 ~~vl~h~--~d~~~~l----------G~lvi~t~~~ 278 (288)
..+++|+ .++..++ |.+++.++..
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 9999999 4555555 8898888754
No 50
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.54 E-value=1.8e-14 Score=127.58 Aligned_cols=102 Identities=13% Similarity=0.044 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCccchHHH----HHHHhCCCCEE--EEEeCCHHHHHHHHHHHHhcCCCCCCCE--EEEEecCCCCC----
Q 023034 176 VLGGNIIDASCGSGLFSR----IFAKSGLFSLV--VALDYSENMLKQCYEFVQQESNFPKENF--LLVRADISRLP---- 243 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~----~l~~~~~~~~v--~gvD~s~~~l~~A~~~~~~~~g~~~~~i--~~~~~d~~~lp---- 243 (288)
.++.+|||||||+|.++. .+...++...+ +|+|+|++|++.|++++....+ ..++ .+..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CCcceEEEEecchhhhhhhhc
Confidence 457799999999997554 44444555544 9999999999999999865311 2344 44555555443
Q ss_pred --CCCCccceEEeccccccCCCccccc----------ceEEEEecCcc
Q 023034 244 --FASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 244 --~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~ 279 (288)
+++++||+|++.+++||++|+..++ |.+++.....+
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 176 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS 176 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 5688999999999999999999888 88888876543
No 51
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.54 E-value=7.1e-14 Score=123.02 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=89.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++... .+|+|+|+|+.+++.|++++...+ ...++.++.+|+.++|
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE--NLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC--CCSCEEEEESCGGGCC---
T ss_pred HHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC--CCCCeEEEECChhhCC---
Confidence 4556667777789999999999999999985432 399999999999999999987651 2358999999998776
Q ss_pred CccceEEeccccccC--CCccccc----------ceEEEEecCccc
Q 023034 247 SSIDAVHAGAAIHCW--SSPSTGV----------GVFFQVTLIIHV 280 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~--~d~~~~l----------G~lvi~t~~~~~ 280 (288)
++||+|++..+++|+ +++..++ |.+++.++....
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 789999999999999 5566665 999998876544
No 52
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.53 E-value=2e-14 Score=123.99 Aligned_cols=104 Identities=11% Similarity=0.027 Sum_probs=87.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+...+...++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|++++... .++.++++|+..+++++
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKLY-ATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHC-SEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCS
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhc-CEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCC
Confidence 3445555656788999999999999999988863 58999999999999999986442 57999999999999888
Q ss_pred CccceEEeccccccCCC--ccccc----------ceEEEEec
Q 023034 247 SSIDAVHAGAAIHCWSS--PSTGV----------GVFFQVTL 276 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d--~~~~l----------G~lvi~t~ 276 (288)
++||+|++..+++|+++ +..++ |.+++.+.
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999999964 55555 88888875
No 53
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.53 E-value=3.3e-14 Score=139.37 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=94.0
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCC---CCCCCEEEEEecCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESN---FPKENFLLVRADISR 241 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g---~~~~~i~~~~~d~~~ 241 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+ +..+|+|+|+|+.|++.|++++....+ ....++.++++|+.+
T Consensus 710 le~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred HHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 4555666655568899999999999999999987 445999999999999999997764311 013579999999999
Q ss_pred CCCCCCccceEEeccccccCCCccc--cc---------ceEEEEecCccc
Q 023034 242 LPFASSSIDAVHAGAAIHCWSSPST--GV---------GVFFQVTLIIHV 280 (288)
Q Consensus 242 lp~~~~sfD~V~~~~vl~h~~d~~~--~l---------G~lvi~t~~~~~ 280 (288)
+++.+++||+|++..+++|++++.. ++ |.++++++....
T Consensus 790 Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIISTPN~ey 839 (950)
T 3htx_A 790 FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEF 839 (950)
T ss_dssp CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEECBGGG
T ss_pred CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEEecCchh
Confidence 9999999999999999999998663 22 988888876644
No 54
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=5e-14 Score=119.26 Aligned_cols=103 Identities=25% Similarity=0.395 Sum_probs=86.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+.. +.+|||+|||+|.++..+++.++ +++|+|+|+.+++.|++++... ..++.++++|+.++++++
T Consensus 30 ~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 30 PLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARKLSFED 101 (227)
T ss_dssp HHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTSCCSCT
T ss_pred HHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhcCCCCC
Confidence 444555543 78999999999999999999987 9999999999999999998776 368999999999998888
Q ss_pred CccceEEeccc--cccCCCccccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAA--IHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~v--l~h~~d~~~~l----------G~lvi~t~~ 277 (288)
++||+|++..+ ++|.+++..++ |.+++.++.
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99999999999 55555665555 888888765
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=1.5e-14 Score=123.72 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=84.2
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||||||+|.++..+++.+. +++|+|+|+.|++.|++++... ..++.++++|+..++++ ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQ----GLKPRLACQDISNLNIN-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHT----TCCCEEECCCGGGCCCS-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhc----CCCeEEEecccccCCcc-CCceEEEEcC
Confidence 578999999999999999999876 9999999999999999998776 23789999999998876 8999999998
Q ss_pred -ccccCC---Cccccc----------ceEEEEecCcccHH
Q 023034 257 -AIHCWS---SPSTGV----------GVFFQVTLIIHVVE 282 (288)
Q Consensus 257 -vl~h~~---d~~~~l----------G~lvi~t~~~~~l~ 282 (288)
+++|++ ++..++ |.+++.++.+..+.
T Consensus 110 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 149 (246)
T 1y8c_A 110 DSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLS 149 (246)
T ss_dssp TGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHH
T ss_pred ccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHH
Confidence 999994 444444 88888877665443
No 56
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.53 E-value=3.5e-14 Score=121.89 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=83.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.|++++...+ ..++.++.+|+..+++++++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 57899999999999999998876 3599999999999999999876641 3468999999999988888999999999
Q ss_pred ccccCCCcc--ccc----------ceEEEEecC
Q 023034 257 AIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 257 vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
+++|++++. .++ |.+++.++.
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 999999865 444 888887754
No 57
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.53 E-value=1.5e-13 Score=115.42 Aligned_cols=115 Identities=14% Similarity=0.073 Sum_probs=91.3
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
.....+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++++..+ ...++.++.+|+.+..
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYG--LSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCTTGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcC--CCCCEEEEeCchhhhc
Confidence 334556677777788999999999999999999984 499999999999999999988762 1237999999998843
Q ss_pred CCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHhh
Q 023034 244 FASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAVS 287 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~~ 287 (288)
.....||+|++..++ ++. ++ |.+++.+...+++.++.+.
T Consensus 118 ~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 166 (204)
T 3njr_A 118 ADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQL 166 (204)
T ss_dssp TTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHH
T ss_pred ccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHH
Confidence 334679999988755 233 33 9999999988888777653
No 58
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.52 E-value=1.1e-13 Score=116.07 Aligned_cols=107 Identities=16% Similarity=0.071 Sum_probs=90.1
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
...+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|++++...+ ..++.++.+|+.+.+..
T Consensus 66 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQGWQA 140 (210)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCGG
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCcccCCcc
Confidence 45666777777899999999999999999999865 99999999999999999988762 35799999999887767
Q ss_pred CCccceEEeccccccCCCccc-cc---ceEEEEecC
Q 023034 246 SSSIDAVHAGAAIHCWSSPST-GV---GVFFQVTLI 277 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~-~l---G~lvi~t~~ 277 (288)
+++||+|++..+++|+++... .| |.+++....
T Consensus 141 ~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhHHHHHhcccCcEEEEEEcC
Confidence 789999999999999987433 33 888877654
No 59
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=7.9e-14 Score=114.71 Aligned_cols=116 Identities=16% Similarity=0.199 Sum_probs=92.3
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCC--EEEEEecCCCC
Q 023034 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKEN--FLLVRADISRL 242 (288)
Q Consensus 165 ~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~--i~~~~~d~~~l 242 (288)
..+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++... + ..+ +.++.+|+.+
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~-~--~~~~~~~~~~~d~~~- 113 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLN-N--LDNYDIRVVHSDLYE- 113 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT-T--CTTSCEEEEECSTTT-
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHc-C--CCccceEEEECchhc-
Confidence 34667777776678899999999999999999884 49999999999999999998776 2 333 9999999987
Q ss_pred CCCCCccceEEeccccccC-CCccccc----------ceEEEEecCcccHHHHHh
Q 023034 243 PFASSSIDAVHAGAAIHCW-SSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 243 p~~~~sfD~V~~~~vl~h~-~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
++.+++||+|++..+++|. .+...++ |.+++.++......++.+
T Consensus 114 ~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 168 (194)
T 1dus_A 114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAK 168 (194)
T ss_dssp TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHH
T ss_pred ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHH
Confidence 3457789999999888762 3333343 999999988766665544
No 60
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.52 E-value=1.1e-13 Score=123.69 Aligned_cols=109 Identities=15% Similarity=0.171 Sum_probs=90.7
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
.+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.|++.|++++...+ ...++.++.+|+.++|
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASID--TNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCGGGCC-
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECChHHCC-
Confidence 355666777777899999999999999999988 55 99999999999999999987751 2356999999998875
Q ss_pred CCCccceEEeccccccCC--Cccccc----------ceEEEEecCcccH
Q 023034 245 ASSSIDAVHAGAAIHCWS--SPSTGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~--d~~~~l----------G~lvi~t~~~~~l 281 (288)
++||+|++..+++|++ ++..++ |.+++.++.....
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 200 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHP 200 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCH
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCc
Confidence 7899999999999994 555555 9999998876553
No 61
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.52 E-value=4.1e-14 Score=130.17 Aligned_cols=104 Identities=18% Similarity=0.273 Sum_probs=88.1
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhc-----CCCCCCCEEEEEecCCCC------
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQE-----SNFPKENFLLVRADISRL------ 242 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~-----~g~~~~~i~~~~~d~~~l------ 242 (288)
..++.+|||||||+|.++..+++.. +..+|+|+|+|+.|++.|+++++.. +.....++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3468899999999999999998873 5679999999999999999987643 101236899999999987
Q ss_pred CCCCCccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 243 PFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 243 p~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++++++||+|++..+++|++++..++ |.|++.++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 88899999999999999999988877 8888887654
No 62
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.51 E-value=6.8e-14 Score=123.16 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++... ..++.++++|+..+++ +++||+|++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~-~~~fD~i~~~ 191 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKE----NLNISTALYDINAANI-QENYDFIVST 191 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCGGGCCC-CSCEEEEEEC
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHc----CCceEEEEeccccccc-cCCccEEEEc
Confidence 3588999999999999999999976 9999999999999999998876 2389999999998887 7899999999
Q ss_pred cccccCCCcc--ccc----------ceEEEEec
Q 023034 256 AAIHCWSSPS--TGV----------GVFFQVTL 276 (288)
Q Consensus 256 ~vl~h~~d~~--~~l----------G~lvi~t~ 276 (288)
.+++|++++. .++ |.+++.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999997654 344 77676654
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.50 E-value=4.5e-14 Score=118.60 Aligned_cols=99 Identities=21% Similarity=0.242 Sum_probs=82.1
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
+..+...+. ++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++ ++.+..+|+..++ .
T Consensus 34 ~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~ 99 (211)
T 3e23_A 34 LTKFLGELP--AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-A 99 (211)
T ss_dssp HHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-C
T ss_pred HHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-C
Confidence 344444444 478999999999999999999866 9999999999999999874 4557889999888 7
Q ss_pred CCccceEEeccccccCC--Cccccc----------ceEEEEecCc
Q 023034 246 SSSIDAVHAGAAIHCWS--SPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~--d~~~~l----------G~lvi~t~~~ 278 (288)
+++||+|++..+++|++ ++..++ |.+++.+...
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 89999999999999998 555555 8888886543
No 64
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=1.1e-13 Score=120.32 Aligned_cols=89 Identities=21% Similarity=0.312 Sum_probs=77.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ ..++.++++|+.++++ +++||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRR--------NPDAVLHHGDMRDFSL-GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTCCC-SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhh--------CCCCEEEECChHHCCc-cCCcCEEEEcC
Confidence 468999999999999999999876 999999999999999987 3478999999999988 78999999998
Q ss_pred -ccccCCCcc---ccc----------ceEEEEec
Q 023034 257 -AIHCWSSPS---TGV----------GVFFQVTL 276 (288)
Q Consensus 257 -vl~h~~d~~---~~l----------G~lvi~t~ 276 (288)
+++|+++++ .++ |.+++.++
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999997543 333 88887653
No 65
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.50 E-value=1.5e-13 Score=116.26 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=85.6
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC--CCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR--LPFA 245 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~--lp~~ 245 (288)
.+.+.+. .++.+|||||||+|.++..+++.+ .+++|+|+|+.+++.++++ ...++.+|+.. ++++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~ 90 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPYE 90 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCSC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCCC
Confidence 4455555 568899999999999999999885 5999999999999999864 23678999986 6777
Q ss_pred CCccceEEeccccccCCCccccc----------ceEEEEecCcccHHH
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVED 283 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~e 283 (288)
+++||+|++..+++|++++..++ |.+++.++.......
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~ 138 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISV 138 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHH
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHH
Confidence 89999999999999999987766 899998877655443
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.49 E-value=9.7e-14 Score=123.08 Aligned_cols=114 Identities=18% Similarity=0.247 Sum_probs=88.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
...+.+...+... +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...+.....++.++++|+.+++
T Consensus 70 ~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 70 SEAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred HHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 3345566666544 44999999999999999999875 89999999999999999987651000057999999999998
Q ss_pred CCCCccceEEec-cccccCCC--ccccc----------ceEEEEecCcccH
Q 023034 244 FASSSIDAVHAG-AAIHCWSS--PSTGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 244 ~~~~sfD~V~~~-~vl~h~~d--~~~~l----------G~lvi~t~~~~~l 281 (288)
+ +++||+|++. .+++|++. ...++ |.|++.++.....
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 7 7899999865 66776653 23334 9999999887654
No 67
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.49 E-value=2.8e-14 Score=137.79 Aligned_cols=86 Identities=16% Similarity=0.278 Sum_probs=77.3
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEEec
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAG 255 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~~~ 255 (288)
+.+|||||||.|.++..|++.|. +|+|||+|+.+++.|+..+.+.+ ..++.+.+++++++ ++++++||+|++.
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 67999999999999999999987 99999999999999999987762 35799999999987 5677899999999
Q ss_pred cccccCCCccccc
Q 023034 256 AAIHCWSSPSTGV 268 (288)
Q Consensus 256 ~vl~h~~d~~~~l 268 (288)
.+|||++|+....
T Consensus 142 e~~ehv~~~~~~~ 154 (569)
T 4azs_A 142 SVFHHIVHLHGID 154 (569)
T ss_dssp SCHHHHHHHHCHH
T ss_pred cchhcCCCHHHHH
Confidence 9999999987654
No 68
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=1.6e-13 Score=111.97 Aligned_cols=112 Identities=15% Similarity=0.234 Sum_probs=91.4
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+...+...++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++... + ..++.++.+|+.+ +++
T Consensus 24 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~-~--~~~~~~~~~d~~~-~~~ 97 (183)
T 2yxd_A 24 RAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKR--CKFVYAIDYLDGAIEVTKQNLAKF-N--IKNCQIIKGRAED-VLD 97 (183)
T ss_dssp HHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTT--SSEEEEEECSHHHHHHHHHHHHHT-T--CCSEEEEESCHHH-HGG
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHc-C--CCcEEEEECCccc-ccc
Confidence 455666667677889999999999999999983 359999999999999999998876 2 3579999999987 666
Q ss_pred CCccceEEeccccccCCCccccc--------ceEEEEecCcccHHHHHhh
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV--------GVFFQVTLIIHVVEDLAVS 287 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l--------G~lvi~t~~~~~l~el~~~ 287 (288)
+++||+|++..+ .++..++ |.+++.++....+.++.+.
T Consensus 98 ~~~~D~i~~~~~----~~~~~~l~~~~~~~gG~l~~~~~~~~~~~~~~~~ 143 (183)
T 2yxd_A 98 KLEFNKAFIGGT----KNIEKIIEILDKKKINHIVANTIVLENAAKIINE 143 (183)
T ss_dssp GCCCSEEEECSC----SCHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEECCc----ccHHHHHHHHhhCCCCEEEEEecccccHHHHHHH
Confidence 789999999988 3333333 8999999888887776653
No 69
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=8.6e-13 Score=113.98 Aligned_cols=116 Identities=20% Similarity=0.181 Sum_probs=95.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADIS 240 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~ 240 (288)
......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|+++++.. + ..++.+..+|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~ 158 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLE 158 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGG
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchh
Confidence 344566777777778999999999999999999998 65679999999999999999998764 3 468999999999
Q ss_pred CCCCCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 241 RLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 241 ~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+.++++++||+|++ +++++..++ |.+++.++....+.++.+
T Consensus 159 ~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 209 (258)
T 2pwy_A 159 EAELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVR 209 (258)
T ss_dssp GCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHH
T ss_pred hcCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHH
Confidence 88888889999998 466776666 899998887766655543
No 70
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.48 E-value=7.2e-14 Score=115.20 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=83.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
+..+..++.. ..+|||+|||+|.++..++...+..+|+++|+|+.|++.+++++...+ ...++.+ +|.... .+
T Consensus 40 Y~~~~~~l~~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g--~~~~v~~--~d~~~~-~~ 112 (200)
T 3fzg_A 40 YTYVFGNIKH--VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK--TTIKYRF--LNKESD-VY 112 (200)
T ss_dssp HHHHHHHSCC--CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC--CSSEEEE--ECCHHH-HT
T ss_pred HHHHHhhcCC--CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC--CCccEEE--eccccc-CC
Confidence 4555666644 779999999999999999999888899999999999999999998862 1124554 666544 35
Q ss_pred CCccceEEeccccccCCCccccc---------ceEEEEec
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV---------GVFFQVTL 276 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l---------G~lvi~t~ 276 (288)
.++||+|++..+|||+++.+..+ |.++++-+
T Consensus 113 ~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 113 KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 68899999999999997776666 77777766
No 71
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=2.6e-13 Score=117.91 Aligned_cols=100 Identities=25% Similarity=0.359 Sum_probs=82.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+...+. ++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++.. . .++++|+.++++++
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCC
Confidence 33444444 578999999999999999998865 99999999999999998731 1 28899999999989
Q ss_pred CccceEEeccccccC-CCccccc----------ceEEEEecCcc
Q 023034 247 SSIDAVHAGAAIHCW-SSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~-~d~~~~l----------G~lvi~t~~~~ 279 (288)
++||+|++..+++|+ +++..++ |.+++.++...
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 999999999877776 6766666 88988887654
No 72
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.47 E-value=1.6e-13 Score=114.34 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=79.2
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEeccc
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~v 257 (288)
+ +|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++... ..++.++++|+..+++++++||+|++..
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~- 102 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEK----GVKITTVQSNLADFDIVADAWEGIVSIF- 102 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHH----TCCEEEECCBTTTBSCCTTTCSEEEEEC-
T ss_pred C-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhc----CCceEEEEcChhhcCCCcCCccEEEEEh-
Confidence 5 999999999999999998865 9999999999999999998876 3489999999999998889999999954
Q ss_pred cccCC--Cccccc----------ceEEEEecCcccH
Q 023034 258 IHCWS--SPSTGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 258 l~h~~--d~~~~l----------G~lvi~t~~~~~l 281 (288)
.|++ ++..++ |.+++.++.....
T Consensus 103 -~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 137 (202)
T 2kw5_A 103 -CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQL 137 (202)
T ss_dssp -CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTG
T ss_pred -hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 4442 344444 9999998765443
No 73
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=7.1e-13 Score=116.32 Aligned_cols=111 Identities=19% Similarity=0.122 Sum_probs=88.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~lp~ 244 (288)
..+...+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++... + ..++.++.+|+.+ ++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~~ 175 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-FI 175 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-CC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-cC
Confidence 45566667778899999999999999999987 55569999999999999999998764 2 4679999999987 66
Q ss_pred CCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 245 ASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
++++||+|++ |++++..++ |.+++.+.......++.+
T Consensus 176 ~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 222 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVL 222 (275)
T ss_dssp CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHH
T ss_pred cCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Confidence 6789999998 677777766 999999987766666544
No 74
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.46 E-value=4.3e-13 Score=118.43 Aligned_cols=98 Identities=8% Similarity=0.006 Sum_probs=78.4
Q ss_pred hhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccc
Q 023034 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD 250 (288)
..+...++.+|||||||+|.++..+..+.++++|+|+|+|+.|++.|+++++.. | ..++.++++|+.+++ +++||
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-g--l~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-G--VDGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-T--CCSEEEEESCGGGGG--GCCCS
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-C--CCCeEEEECchhhCC--CCCcC
Confidence 355677899999999999987755444434569999999999999999999887 3 278999999999876 78999
Q ss_pred eEEeccccccCCCccccc----------ceEEEEec
Q 023034 251 AVHAGAAIHCWSSPSTGV----------GVFFQVTL 276 (288)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l----------G~lvi~t~ 276 (288)
+|++... ++++.+++ |++++...
T Consensus 191 vV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 191 VLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9998665 45655555 88887664
No 75
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.46 E-value=1.7e-13 Score=117.18 Aligned_cols=106 Identities=20% Similarity=0.290 Sum_probs=86.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+...+.. +.+|||||||+|.++..+++. . +++|+|+|+.|++.|++++... ..++.++++|+.+++++
T Consensus 25 ~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~-~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~- 94 (243)
T 3d2l_A 25 AWVLEQVEP--GKRIADIGCGTGTATLLLADH-Y--EVTGVDLSEEMLEIAQEKAMET----NRHVDFWVQDMRELELP- 94 (243)
T ss_dssp HHHHHHSCT--TCEEEEESCTTCHHHHHHTTT-S--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCGGGCCCS-
T ss_pred HHHHHHcCC--CCeEEEecCCCCHHHHHHhhC-C--eEEEEECCHHHHHHHHHhhhhc----CCceEEEEcChhhcCCC-
Confidence 445555554 689999999999999999887 4 9999999999999999998776 35789999999988876
Q ss_pred CccceEEecc-ccccCCCc---cccc----------ceEEEEecCcccHH
Q 023034 247 SSIDAVHAGA-AIHCWSSP---STGV----------GVFFQVTLIIHVVE 282 (288)
Q Consensus 247 ~sfD~V~~~~-vl~h~~d~---~~~l----------G~lvi~t~~~~~l~ 282 (288)
++||+|++.. +++|+.++ ..++ |.+++.++.+..+.
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 144 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKME 144 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHH
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHH
Confidence 8899999986 99999544 3333 88888777665443
No 76
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.46 E-value=8.2e-14 Score=123.45 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=79.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----------------------------
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF----------------------------- 227 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~----------------------------- 227 (288)
++.+|||||||+|.++..+++..+..+|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999865579999999999999999986543100
Q ss_pred --------------------------CCCCEEEEEecCCCCC-----CCCCccceEEeccccccCC------Cccccc--
Q 023034 228 --------------------------PKENFLLVRADISRLP-----FASSSIDAVHAGAAIHCWS------SPSTGV-- 268 (288)
Q Consensus 228 --------------------------~~~~i~~~~~d~~~lp-----~~~~sfD~V~~~~vl~h~~------d~~~~l-- 268 (288)
...++.++++|+...+ +.+++||+|++..+++|+. ++.+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0147999999998654 5678999999999998875 455555
Q ss_pred --------ceEEEEecC
Q 023034 269 --------GVFFQVTLI 277 (288)
Q Consensus 269 --------G~lvi~t~~ 277 (288)
|.|++....
T Consensus 206 ~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHEEEEEEEEEECCC
T ss_pred HHHHhCCCcEEEEecCC
Confidence 777776543
No 77
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.46 E-value=1.2e-13 Score=123.01 Aligned_cols=100 Identities=14% Similarity=0.085 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCccchHHHHHH-HhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEe
Q 023034 176 VLGGNIIDASCGSGLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~-~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~ 254 (288)
.++.+|||||||+|.++..++ ...+..+|+|+|+|+.|++.|++++...+ ...++.++++|+.+++++ ++||+|++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--LAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECchhcCCcc-CCeEEEEE
Confidence 458899999999999999985 44556799999999999999999987651 234599999999999987 99999999
Q ss_pred ccccccCCCcccc---c----------ceEEEEecCc
Q 023034 255 GAAIHCWSSPSTG---V----------GVFFQVTLII 278 (288)
Q Consensus 255 ~~vl~h~~d~~~~---l----------G~lvi~t~~~ 278 (288)
..+++|++++... + |.+++.++..
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 9999999998863 3 8999888654
No 78
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.46 E-value=1.1e-12 Score=113.30 Aligned_cols=117 Identities=23% Similarity=0.263 Sum_probs=94.8
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCC
Q 023034 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (288)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~ 240 (288)
.......+...+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|+++++..+ ...++.++.+|+.
T Consensus 78 ~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--FDDRVTIKLKDIY 155 (255)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--CTTTEEEECSCGG
T ss_pred cHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--CCCceEEEECchh
Confidence 3445567777888788999999999999999999998 666799999999999999999988762 1234999999998
Q ss_pred CCCCCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 241 RLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 241 ~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+. +++++||+|++ +.+++..++ |.+++..+......++.+
T Consensus 156 ~~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 205 (255)
T 3mb5_A 156 EG-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHE 205 (255)
T ss_dssp GC-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHH
T ss_pred hc-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 54 66788999998 466776666 899888887766666544
No 79
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.45 E-value=2e-13 Score=121.74 Aligned_cols=104 Identities=18% Similarity=0.164 Sum_probs=76.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC----CCCEEEEEecC------CCC--CC
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP----KENFLLVRADI------SRL--PF 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~----~~~i~~~~~d~------~~l--p~ 244 (288)
++.+|||||||+|..+..++..+. .+|+|+|+|+.|++.|+++.... +.. ..++.+.++|+ ..+ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~-~~v~GiD~S~~~l~~A~~~~~~~-~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEI-ALLVATDPDADAIARGNERYNKL-NSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHH-CC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCC-CeEEEEECCHHHHHHHHHHHHhc-cccccccccccchhhhhcccchhhhhhhccc
Confidence 478999999999986666555542 49999999999999999988765 100 01367888887 322 35
Q ss_pred CCCccceEEeccccccCCCc---cccc----------ceEEEEecCcccHH
Q 023034 245 ASSSIDAVHAGAAIHCWSSP---STGV----------GVFFQVTLIIHVVE 282 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~---~~~l----------G~lvi~t~~~~~l~ 282 (288)
++++||+|++.+++||+-++ ..++ |.|+++++....+.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~ 176 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLS 176 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHT
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 67899999999999986332 3333 99999998765544
No 80
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.45 E-value=3.1e-13 Score=119.08 Aligned_cols=104 Identities=14% Similarity=0.195 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC-CCCccceEEe
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-ASSSIDAVHA 254 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~-~~~sfD~V~~ 254 (288)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|++++...+ ...++.++++|+.++++ .+++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGI-GEYYGVDIAEVSINDARVRARNMK--RRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTC-SEEEEEESCHHHHHHHHHHHHTSC--CSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHhcC--CCccEEEEECCccccccCCCCCcCEEEE
Confidence 3578999999999999999888753 599999999999999999987651 12578999999999888 5889999999
Q ss_pred cccccc----CCCccccc----------ceEEEEecCcccHH
Q 023034 255 GAAIHC----WSSPSTGV----------GVFFQVTLIIHVVE 282 (288)
Q Consensus 255 ~~vl~h----~~d~~~~l----------G~lvi~t~~~~~l~ 282 (288)
..+++| ..++..++ |.+++.++....+.
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 181 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVIL 181 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHH
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence 999987 34445454 99999988765544
No 81
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.45 E-value=5.7e-13 Score=111.41 Aligned_cols=106 Identities=15% Similarity=0.126 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++...+ ..++.++.+|+.+.+ +++||+|++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGA-KSVLATDISDESMTAAEENAALNG---IYDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTT---CCCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcC---CCceEEEeccccccC--CCCceEEEEC
Confidence 3578999999999999999988643 699999999999999999988762 234999999997653 5899999999
Q ss_pred cccccCC----Cccccc---ceEEEEecCcccHHHHHhh
Q 023034 256 AAIHCWS----SPSTGV---GVFFQVTLIIHVVEDLAVS 287 (288)
Q Consensus 256 ~vl~h~~----d~~~~l---G~lvi~t~~~~~l~el~~~ 287 (288)
.+++++. ...+.| |.+++.++......++.+.
T Consensus 133 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 171 (205)
T 3grz_A 133 ILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQA 171 (205)
T ss_dssp SCHHHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHH
Confidence 9988753 333334 9999988888777776653
No 82
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=6.6e-13 Score=109.22 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++ ..++.++.+|+..+++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQD--------FPEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHh--------CCCCcEEEcccccCCCCCCceeEEEEC
Confidence 3588999999999999999999865 999999999999999987 356889999999988888999999998
Q ss_pred -cccccCCCc--cccc----------ceEEEEecCc
Q 023034 256 -AAIHCWSSP--STGV----------GVFFQVTLII 278 (288)
Q Consensus 256 -~vl~h~~d~--~~~l----------G~lvi~t~~~ 278 (288)
.+++|++.+ ..++ |.+++.....
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 789988543 3344 8888877654
No 83
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.45 E-value=6.6e-13 Score=112.98 Aligned_cols=106 Identities=16% Similarity=0.118 Sum_probs=86.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.|++++... . ++.++.+|+......
T Consensus 59 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~----~-~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYY----N-NIKLILGDGTLGYEE 131 (231)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTC----S-SEEEEESCGGGCCGG
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcC--EEEEEeCCHHHHHHHHHHHhhc----C-CeEEEECCccccccc
Confidence 45666677777789999999999999999999874 9999999999999999997765 2 899999999873334
Q ss_pred CCccceEEeccccccCCCccc-cc---ceEEEEecCc
Q 023034 246 SSSIDAVHAGAAIHCWSSPST-GV---GVFFQVTLII 278 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~-~l---G~lvi~t~~~ 278 (288)
+++||+|++..+++|+++... .| |.+++.+...
T Consensus 132 ~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEECSS
T ss_pred CCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 678999999999999975422 23 8888776543
No 84
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.44 E-value=5.6e-13 Score=117.16 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=84.8
Q ss_pred HHHhhcC-CCCCCeEEEEcCcc---chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 168 LMKGYLK-PVLGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 168 ~l~~~l~-~~~~~~VLDiGcG~---G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
.+.+++. .....+|||||||+ |.++..+.+..+..+|+|+|+|+.|++.|++++.. ..++.++++|+.+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHH
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCch
Confidence 3334443 23347999999999 99988888777777999999999999999998744 357999999997631
Q ss_pred -----------CCCCccceEEeccccccCCC--ccccc----------ceEEEEecCcc
Q 023034 244 -----------FASSSIDAVHAGAAIHCWSS--PSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 244 -----------~~~~sfD~V~~~~vl~h~~d--~~~~l----------G~lvi~t~~~~ 279 (288)
++..+||+|++..+|||+++ +..++ |.|++..+..+
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 33358999999999999998 55555 99999988764
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=7.6e-13 Score=111.59 Aligned_cols=80 Identities=20% Similarity=0.182 Sum_probs=70.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--CCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~sfD~V~~ 254 (288)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|++++... + ..++.++++|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV-G--VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-C--CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc-C--CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 478999999999999999999987779999999999999999998876 2 368999999999887 77889999999
Q ss_pred ccccc
Q 023034 255 GAAIH 259 (288)
Q Consensus 255 ~~vl~ 259 (288)
+....
T Consensus 118 ~~~~~ 122 (214)
T 1yzh_A 118 NFSDP 122 (214)
T ss_dssp ESCCC
T ss_pred ECCCC
Confidence 86543
No 86
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.44 E-value=2.5e-13 Score=110.75 Aligned_cols=107 Identities=16% Similarity=0.190 Sum_probs=83.4
Q ss_pred HHHHHHHhhcCC--CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 164 KEFELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 164 ~~~~~l~~~l~~--~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
.+.+.+.+.+.. .++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .++.++++|+.+
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------~-----~~~~~~~~d~~~ 72 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------H-----RGGNLVRADLLC 72 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------C-----SSSCEEECSTTT
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------c-----cCCeEEECChhh
Confidence 333444444433 457799999999999999999887 99999999999987 1 367899999987
Q ss_pred CCCCCCccceEEeccccccCCCc---------cccc---------ceEEEEecCcccHHHHHh
Q 023034 242 LPFASSSIDAVHAGAAIHCWSSP---------STGV---------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 242 lp~~~~sfD~V~~~~vl~h~~d~---------~~~l---------G~lvi~t~~~~~l~el~~ 286 (288)
++++++||+|+++..+++.++. ...+ |.+++.........++.+
T Consensus 73 -~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~~~~~~~l~~ 134 (170)
T 3q87_B 73 -SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAVTVGMLYLLVIEANRPKEVLA 134 (170)
T ss_dssp -TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHCCSSEEEEEEEGGGCHHHHHH
T ss_pred -hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhCCCCEEEEEEecCCCHHHHHH
Confidence 6667899999999998887665 1111 899998877777766654
No 87
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=1.2e-13 Score=118.42 Aligned_cols=78 Identities=5% Similarity=0.224 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~ 253 (288)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.|+++.... ..++.++++|+.++ ++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhhcccCCCceEEEE
Confidence 4578999999999999999977654 48999999999999999988765 36799999999988 88899999999
Q ss_pred e-cccc
Q 023034 254 A-GAAI 258 (288)
Q Consensus 254 ~-~~vl 258 (288)
+ .+.+
T Consensus 134 ~d~~~~ 139 (236)
T 1zx0_A 134 YDTYPL 139 (236)
T ss_dssp ECCCCC
T ss_pred ECCccc
Confidence 9 6654
No 88
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.44 E-value=4.4e-13 Score=116.82 Aligned_cols=101 Identities=15% Similarity=0.131 Sum_probs=77.9
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC-
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF- 244 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~- 244 (288)
.+.+...+...++.+|||||||+|.++..+++++. +|+|+|+|+.|++.|++++... ++..++.+++.
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~~ 102 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTSC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeecccc
Confidence 35566777777899999999999999999999886 9999999999999999985432 23344444332
Q ss_pred ----CCCccceEEeccccccCCCcc--ccc---------ceEEEEecC
Q 023034 245 ----ASSSIDAVHAGAAIHCWSSPS--TGV---------GVFFQVTLI 277 (288)
Q Consensus 245 ----~~~sfD~V~~~~vl~h~~d~~--~~l---------G~lvi~t~~ 277 (288)
.+++||+|++..+++|+...+ .++ |.++++...
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lLPGG~l~lS~~~ 150 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLVGSGTVRASVKL 150 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTSEEEEEEEB
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhCcCcEEEEEecc
Confidence 257899999999999986432 233 888887653
No 89
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.44 E-value=6.8e-13 Score=113.12 Aligned_cols=91 Identities=20% Similarity=0.270 Sum_probs=77.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEe-
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA- 254 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~- 254 (288)
.++.+|||||||+|.++..+++.++ +++|+|+|+.|++.|+++ ..++.++.+|+..+++ +++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR--------LPDATLHQGDMRDFRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH--------CTTCEEEECCTTTCCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh--------CCCCEEEECCHHHccc-CCCCcEEEEc
Confidence 4578999999999999999999987 999999999999999987 3568899999999887 789999995
Q ss_pred ccccccCCCcc---ccc----------ceEEEEecC
Q 023034 255 GAAIHCWSSPS---TGV----------GVFFQVTLI 277 (288)
Q Consensus 255 ~~vl~h~~d~~---~~l----------G~lvi~t~~ 277 (288)
..+++|++++. .++ |.+++.++.
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 55999997643 333 888887654
No 90
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=2.3e-13 Score=116.88 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC-----Cccc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS-----SSID 250 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~-----~sfD 250 (288)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.|++++. ..++.++++|+.++++.. ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 4578999999999999999999988 99999999999999999852 348999999999875432 2499
Q ss_pred eEEeccccccCC--Cccccc----------ceEEEEecCccc
Q 023034 251 AVHAGAAIHCWS--SPSTGV----------GVFFQVTLIIHV 280 (288)
Q Consensus 251 ~V~~~~vl~h~~--d~~~~l----------G~lvi~t~~~~~ 280 (288)
+|++..+++|++ ++..++ |.+++..+....
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 999999999998 555665 888888876543
No 91
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.43 E-value=1.1e-13 Score=114.59 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--CCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~sfD~V~ 253 (288)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|+++++.. + ..++.++++|+.+++ +++++||+|+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGA-ASVLFVESDQRSAAVIARNIEAL-G--LSGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEECCHHHHHHHHHHHHHH-T--CSCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHHc-C--CCceEEEEccHHHHHhhccCCCccEEE
Confidence 4588999999999999998887654 58999999999999999999887 2 368999999998764 4468999999
Q ss_pred eccccccC-CCccc---------cc---ceEEEEecCccc
Q 023034 254 AGAAIHCW-SSPST---------GV---GVFFQVTLIIHV 280 (288)
Q Consensus 254 ~~~vl~h~-~d~~~---------~l---G~lvi~t~~~~~ 280 (288)
+...+++. ++... .| |.+++.+.....
T Consensus 119 ~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 119 ADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred ECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 98887764 33322 33 888888765443
No 92
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.42 E-value=8.4e-13 Score=117.83 Aligned_cols=106 Identities=20% Similarity=0.160 Sum_probs=83.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CCCCCEEEEEecCCCCC----CC--C
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----FPKENFLLVRADISRLP----FA--S 246 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g----~~~~~i~~~~~d~~~lp----~~--~ 246 (288)
++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+. ....++.++++|+..++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 57899999999999999998753 36999999999999999998765300 01347999999999876 54 4
Q ss_pred CccceEEeccccccC-CCc---cccc----------ceEEEEecCcccHHH
Q 023034 247 SSIDAVHAGAAIHCW-SSP---STGV----------GVFFQVTLIIHVVED 283 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~-~d~---~~~l----------G~lvi~t~~~~~l~e 283 (288)
++||+|++..++||+ .++ ..++ |.++++++..+.+.+
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~ 163 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIR 163 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHH
Confidence 599999999999998 443 3444 999999988765543
No 93
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.42 E-value=9.9e-13 Score=117.83 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=88.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+. ..+|+|+|+|+.+++.|+++++..+ ..++.+..+|+.+.+.
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g---~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG---IENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCG
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCeEEEECChhhccc
Confidence 35566777777899999999999999999999876 3579999999999999999988762 3569999999988655
Q ss_pred CCCccceEEeccccccCCCcc-ccc---ceEEEEecC
Q 023034 245 ASSSIDAVHAGAAIHCWSSPS-TGV---GVFFQVTLI 277 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~~-~~l---G~lvi~t~~ 277 (288)
.+++||+|++..+++|+++.. +.| |.+++....
T Consensus 141 ~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCB
T ss_pred cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEECC
Confidence 678999999999999997422 222 888777543
No 94
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=1.5e-12 Score=109.54 Aligned_cols=109 Identities=15% Similarity=0.118 Sum_probs=86.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
..+.+.+...++.+|||||||+|.++..+++.+ +..+|+++|+++.+++.|++++...+ ..++.+..+|+......
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGGGCCGG
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcccCCCC
Confidence 455666666778999999999999999999886 44699999999999999999987762 35699999998543323
Q ss_pred CCccceEEeccccccCCCcc-ccc---ceEEEEecCc
Q 023034 246 SSSIDAVHAGAAIHCWSSPS-TGV---GVFFQVTLII 278 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~-~~l---G~lvi~t~~~ 278 (288)
+++||+|++..+++|+++.. +.| |.+++.....
T Consensus 144 ~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSS
T ss_pred CCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCC
Confidence 67899999999999997532 233 7887776543
No 95
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.41 E-value=3.3e-12 Score=111.90 Aligned_cols=118 Identities=16% Similarity=0.234 Sum_probs=94.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADIS 240 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~ 240 (288)
......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|++++... ++ ...++.++.+|+.
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-PPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-CCTTEEEECSCGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCCcEEEEECchH
Confidence 444566777777778899999999999999999985 55569999999999999999987653 10 1357999999999
Q ss_pred CCCCCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 241 RLPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 241 ~lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+.++++++||+|++ +++++..++ |.+++.++....+.++.+
T Consensus 164 ~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 214 (280)
T 1i9g_A 164 DSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVE 214 (280)
T ss_dssp GCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHH
T ss_pred hcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHH
Confidence 88887889999998 456666665 999999988776666543
No 96
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.41 E-value=7e-13 Score=112.08 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=68.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--CCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~sfD~V~~ 254 (288)
++.+|||||||+|.++..+++..+..+++|+|+|+.|++.|++++...+ ..++.++++|+..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~---~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE---AQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC---CSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 4779999999999999999999777899999999999999999988762 467999999998876 77889999987
Q ss_pred cccc
Q 023034 255 GAAI 258 (288)
Q Consensus 255 ~~vl 258 (288)
.+..
T Consensus 115 ~~~~ 118 (213)
T 2fca_A 115 NFSD 118 (213)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 6543
No 97
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=8.2e-13 Score=111.72 Aligned_cols=88 Identities=16% Similarity=0.248 Sum_probs=77.7
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEeccc
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~v 257 (288)
+.+|||||||+|.++..+++. +|+|+|+.|++.++++ ++.++.+|+..+++++++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 789999999999999988653 9999999999999874 578999999999988899999999999
Q ss_pred cccCCCccccc----------ceEEEEecCcccH
Q 023034 258 IHCWSSPSTGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 258 l~h~~d~~~~l----------G~lvi~t~~~~~l 281 (288)
++|++++..++ |.+++.++...+.
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 145 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRESF 145 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSH
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccH
Confidence 99999988777 8899988766543
No 98
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.40 E-value=2.7e-13 Score=114.36 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=80.6
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC---CC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PF 244 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l---p~ 244 (288)
.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ .++.+..+|+..+ ++
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKV 111 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCS
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhccccc
Confidence 344444444578999999999999999999866 999999999999999985 3566788887765 54
Q ss_pred CC-CccceEEeccccccCCCccccc----------ceEEEEecCcc
Q 023034 245 AS-SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIH 279 (288)
Q Consensus 245 ~~-~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~ 279 (288)
.. ++||+|++..+++ .+++..++ |.+++.++.+.
T Consensus 112 ~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp CCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 44 4599999999999 77887777 99999887543
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.40 E-value=6.2e-13 Score=109.08 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=90.0
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
...+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...+ ...++.+..+|+.+ +++
T Consensus 22 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~-~~~ 96 (192)
T 1l3i_A 22 RCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG--LGDNVTLMEGDAPE-ALC 96 (192)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT--CCTTEEEEESCHHH-HHT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC--CCcceEEEecCHHH-hcc
Confidence 4556666677778999999999999999999887 499999999999999999987761 12589999999876 333
Q ss_pred C-CccceEEeccccccCCCccc----cc---ceEEEEecCcccHHHHHh
Q 023034 246 S-SSIDAVHAGAAIHCWSSPST----GV---GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 246 ~-~sfD~V~~~~vl~h~~d~~~----~l---G~lvi~t~~~~~l~el~~ 286 (288)
+ ++||+|++..+++|+...-. .+ |.+++.++......++.+
T Consensus 97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~ 145 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAILLETKFEAME 145 (192)
T ss_dssp TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHH
T ss_pred cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHH
Confidence 3 58999999988766532221 12 899998888777766554
No 100
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.40 E-value=1.4e-12 Score=107.24 Aligned_cols=75 Identities=21% Similarity=0.185 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CCCCccceEEe
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHA 254 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~sfD~V~~ 254 (288)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++++.. + ..++.+++++...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~-~--~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDL-G--IENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHH-T--CCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc-C--CCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 358899999999999999999885 49999999999999999999876 2 368999998887753 45788999988
Q ss_pred c
Q 023034 255 G 255 (288)
Q Consensus 255 ~ 255 (288)
+
T Consensus 96 ~ 96 (185)
T 3mti_A 96 N 96 (185)
T ss_dssp E
T ss_pred e
Confidence 7
No 101
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.40 E-value=6e-13 Score=113.07 Aligned_cols=104 Identities=14% Similarity=0.083 Sum_probs=81.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C--CCCCccceEE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P--FASSSIDAVH 253 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p--~~~~sfD~V~ 253 (288)
++.+|||||||+|.++..+++..+...|+|+|+|+.|++.|++++...+ ..++.++++|+.++ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 4779999999999999999999887899999999999999999988762 46799999999874 3 6789999999
Q ss_pred eccccccCCCcc--------ccc----------ceEEEEecCcccHHH
Q 023034 254 AGAAIHCWSSPS--------TGV----------GVFFQVTLIIHVVED 283 (288)
Q Consensus 254 ~~~vl~h~~d~~--------~~l----------G~lvi~t~~~~~l~e 283 (288)
+.+...+..... .++ |.|++.+-......+
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~ 158 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEH 158 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHH
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHH
Confidence 875443322211 122 999998865544433
No 102
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.39 E-value=1.3e-12 Score=112.34 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC---CCCCCCEEEEEecCCC-CC--CCCCcc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---NFPKENFLLVRADISR-LP--FASSSI 249 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~---g~~~~~i~~~~~d~~~-lp--~~~~sf 249 (288)
.++.+|||||||+|.++..+++..+...|+|+|+|+.|++.|++++.... .....++.++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34678999999999999999998877899999999999999998865310 0114689999999987 66 788999
Q ss_pred ceEEeccc
Q 023034 250 DAVHAGAA 257 (288)
Q Consensus 250 D~V~~~~v 257 (288)
|.|++.+.
T Consensus 125 D~v~~~~~ 132 (235)
T 3ckk_A 125 TKMFFLFP 132 (235)
T ss_dssp EEEEEESC
T ss_pred eEEEEeCC
Confidence 99987543
No 103
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.38 E-value=5.3e-12 Score=110.72 Aligned_cols=116 Identities=23% Similarity=0.257 Sum_probs=92.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|++++...+ ...++.++.+|+.+
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--LIERVTIKVRDISE 175 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--CGGGEEEECCCGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHH
Confidence 344566777777778999999999999999999998 666799999999999999999987751 12579999999987
Q ss_pred CCCCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 242 LPFASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 242 lp~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
. +++++||+|++ +.+++..++ |.+++.+.....+.++.+
T Consensus 176 ~-~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 224 (277)
T 1o54_A 176 G-FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLK 224 (277)
T ss_dssp C-CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHH
T ss_pred c-ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Confidence 6 66678999998 456666665 889998887655555543
No 104
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.38 E-value=2.2e-13 Score=118.76 Aligned_cols=103 Identities=16% Similarity=0.276 Sum_probs=75.7
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC-------------------------
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP------------------------- 228 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~------------------------- 228 (288)
...++.+|||||||+|.+...++..+. .+|+|+|+|+.|++.|+++++...+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 345678999999999988887776664 379999999999999998875531000
Q ss_pred -CCCEE-EEEecCCCC-CCC---CCccceEEeccccccC-CC---ccccc----------ceEEEEecC
Q 023034 229 -KENFL-LVRADISRL-PFA---SSSIDAVHAGAAIHCW-SS---PSTGV----------GVFFQVTLI 277 (288)
Q Consensus 229 -~~~i~-~~~~d~~~l-p~~---~~sfD~V~~~~vl~h~-~d---~~~~l----------G~lvi~t~~ 277 (288)
..++. ++++|+... |++ .++||+|++.++|||+ ++ ...++ |.|++++..
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 01233 889999873 443 5799999999999996 33 23333 999998753
No 105
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.38 E-value=4.9e-12 Score=107.48 Aligned_cols=83 Identities=12% Similarity=0.135 Sum_probs=67.6
Q ss_pred CCCCCeEEEEcCc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CCCCCccceE
Q 023034 175 PVLGGNIIDASCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAV 252 (288)
Q Consensus 175 ~~~~~~VLDiGcG-~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~sfD~V 252 (288)
..++.+|||+||| +|.++..+++.. ..+|+|+|+|+.|++.|++++... ..++.++++|+..+ ++++++||+|
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN----NSNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT----TCCCEEEECSSCSSTTTCCSCEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh----CCCcEEEeCCchhhhhcccCceeEE
Confidence 3468899999999 999999999983 249999999999999999999887 23899999997543 4557899999
Q ss_pred EeccccccCC
Q 023034 253 HAGAAIHCWS 262 (288)
Q Consensus 253 ~~~~vl~h~~ 262 (288)
+++-.+.+.+
T Consensus 128 ~~npp~~~~~ 137 (230)
T 3evz_A 128 FSAPPYYDKP 137 (230)
T ss_dssp EECCCCC---
T ss_pred EECCCCcCCc
Confidence 9987665544
No 106
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.38 E-value=3.3e-12 Score=109.94 Aligned_cols=101 Identities=22% Similarity=0.287 Sum_probs=78.8
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCc
Q 023034 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSS 248 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~s 248 (288)
+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++... ..++.++++|+.+++++ ++
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~-~~ 105 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKER----NLKIEFLQGDVLEIAFK-NE 105 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEESCGGGCCCC-SC
T ss_pred HHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhc----CCceEEEECChhhcccC-CC
Confidence 33344445678999999999999999999876 9999999999999999998776 34799999999988865 68
Q ss_pred cceEEecc-ccccCC--Cccccc----------ceEEEEec
Q 023034 249 IDAVHAGA-AIHCWS--SPSTGV----------GVFFQVTL 276 (288)
Q Consensus 249 fD~V~~~~-vl~h~~--d~~~~l----------G~lvi~t~ 276 (288)
||+|++.. .++|++ ++..++ |.+++..+
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 99999874 455553 233333 77776554
No 107
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.38 E-value=3.2e-13 Score=116.03 Aligned_cols=95 Identities=6% Similarity=0.155 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~ 253 (288)
.+|.+|||||||+|..+..+++..+ .+++|||+|+.|++.|+++.... ..++.++.+|+..+ ++++++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhcccccccCCceEE
Confidence 4588999999999999999988765 58999999999999999998776 56788999998754 57788999997
Q ss_pred e-----ccccccCCCccccc----------ceEEEEe
Q 023034 254 A-----GAAIHCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 254 ~-----~~vl~h~~d~~~~l----------G~lvi~t 275 (288)
. ..+++|++++..++ |+|++..
T Consensus 134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 4 56777887776665 7777643
No 108
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.37 E-value=5.4e-12 Score=115.71 Aligned_cols=112 Identities=16% Similarity=0.141 Sum_probs=85.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC-CCCEEEEEecCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-KENFLLVRADISRLPF 244 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~-~~~i~~~~~d~~~lp~ 244 (288)
.+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.|++.|++++... +.. ..++.++.+|+.+ ++
T Consensus 211 ~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n-gl~~~~~v~~~~~D~~~-~~ 288 (375)
T 4dcm_A 211 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN-MPEALDRCEFMINNALS-GV 288 (375)
T ss_dssp HHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGGGEEEEECSTTT-TC
T ss_pred HHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc-CCCcCceEEEEechhhc-cC
Confidence 45677788777778999999999999999999987779999999999999999998876 211 1358899999987 56
Q ss_pred CCCccceEEeccccccCCCccc-----cc----------ceEEEEecCcc
Q 023034 245 ASSSIDAVHAGAAIHCWSSPST-----GV----------GVFFQVTLIIH 279 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~~~-----~l----------G~lvi~t~~~~ 279 (288)
++++||+|+++..+++...... ++ |.+++......
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 6789999999998886433221 12 88888765443
No 109
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.36 E-value=3.3e-12 Score=109.29 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=85.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
...+.+.+...++.+|||||||+|.++..+++.++ .+|+++|+++.+++.|++++...+ ..++.+..+|+ ..+++
T Consensus 80 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~-~~~~~ 154 (235)
T 1jg1_A 80 VAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG---VKNVHVILGDG-SKGFP 154 (235)
T ss_dssp HHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCG-GGCCG
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEECCc-ccCCC
Confidence 34556666667788999999999999999999874 599999999999999999988762 35699999997 34444
Q ss_pred CC-ccceEEeccccccCCCcc-ccc---ceEEEEecCc
Q 023034 246 SS-SIDAVHAGAAIHCWSSPS-TGV---GVFFQVTLII 278 (288)
Q Consensus 246 ~~-sfD~V~~~~vl~h~~d~~-~~l---G~lvi~t~~~ 278 (288)
+. .||+|++..+++++++.. +.| |.+++.+...
T Consensus 155 ~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 155 PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSS
T ss_pred CCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 43 599999999999987532 233 8888887654
No 110
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.36 E-value=6.2e-12 Score=106.92 Aligned_cols=70 Identities=17% Similarity=0.223 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecC-CCCCCC-CCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRLPFA-SSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~-~~lp~~-~~sfD~V~ 253 (288)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++ ..++.++++|+ ..+|++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 3578999999999999999999865 999999999999999987 35789999999 578888 89999999
Q ss_pred ec
Q 023034 254 AG 255 (288)
Q Consensus 254 ~~ 255 (288)
+.
T Consensus 117 ~~ 118 (226)
T 3m33_A 117 SR 118 (226)
T ss_dssp EE
T ss_pred eC
Confidence 97
No 111
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.36 E-value=1e-12 Score=110.94 Aligned_cols=102 Identities=21% Similarity=0.243 Sum_probs=76.6
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCCCCCCCCccce
Q 023034 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPFASSSIDA 251 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~lp~~~~sfD~ 251 (288)
+...++.+|||||||+|.++..+++.++..+|+|+|+|+.|++.+.++++.. ......++.++++|+.++|+.+++ |.
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~ 101 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GE 101 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EE
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CE
Confidence 3445688999999999999999999977779999999999988644333221 001145899999999999988777 77
Q ss_pred EEec---ccc--ccCCCccccc----------ceEEEEe
Q 023034 252 VHAG---AAI--HCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 252 V~~~---~vl--~h~~d~~~~l----------G~lvi~t 275 (288)
|+.. ..+ +|++++..++ |.+++..
T Consensus 102 v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7633 233 3888888777 7777754
No 112
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=1e-11 Score=111.93 Aligned_cols=123 Identities=19% Similarity=0.197 Sum_probs=85.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcC------CC--CCCCEE
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES------NF--PKENFL 233 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~------g~--~~~~i~ 233 (288)
......+...+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++...+ +. ...++.
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 334566667777778999999999999999999987 666799999999999999999987530 00 125799
Q ss_pred EEEecCCCC--CCCCCccceEEecccccc--CCCccccc---ceEEEEecCcccHHHHH
Q 023034 234 LVRADISRL--PFASSSIDAVHAGAAIHC--WSSPSTGV---GVFFQVTLIIHVVEDLA 285 (288)
Q Consensus 234 ~~~~d~~~l--p~~~~sfD~V~~~~vl~h--~~d~~~~l---G~lvi~t~~~~~l~el~ 285 (288)
++.+|+.+. ++++++||+|++...-.+ +....+.| |.+++.......+.++.
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 229 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELL 229 (336)
T ss_dssp EEESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHH
T ss_pred EEECChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH
Confidence 999999886 566778999998432111 11112222 88888887766555543
No 113
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.35 E-value=5.3e-12 Score=115.94 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++... ...+.++++|+.+.+.++++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~----~~~v~~~~~D~~~~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEAN----ALKAQALHSDVDEALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHT----TCCCEEEECSTTTTSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc----CCCeEEEEcchhhccccCCCeEEEEEC
Confidence 3578999999999999999999875 9999999999999999999876 345899999999988777899999999
Q ss_pred cccccC-----CCccccc----------ceEEEEecCcccH
Q 023034 256 AAIHCW-----SSPSTGV----------GVFFQVTLIIHVV 281 (288)
Q Consensus 256 ~vl~h~-----~d~~~~l----------G~lvi~t~~~~~l 281 (288)
..+++. .+...++ |.+++.+......
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 999882 2233333 8888877554333
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.35 E-value=2.7e-12 Score=111.17 Aligned_cols=79 Identities=10% Similarity=-0.035 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC---CCccceE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 252 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~---~~sfD~V 252 (288)
.++.+|||||||+|..+..++...+..+|+++|+|+.+++.|++++...+ ..++.++++|+++++.. +++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---l~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG---LKGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC---CCceEEEECcHHHhhcccccCCCceEE
Confidence 46789999999999999999998777899999999999999999988772 34699999999887653 4799999
Q ss_pred Eeccc
Q 023034 253 HAGAA 257 (288)
Q Consensus 253 ~~~~v 257 (288)
++..+
T Consensus 156 ~s~a~ 160 (249)
T 3g89_A 156 VARAV 160 (249)
T ss_dssp EEESS
T ss_pred EECCc
Confidence 99754
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.35 E-value=6.2e-12 Score=107.26 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=75.8
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC----CCCC
Q 023034 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LPFA 245 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~----lp~~ 245 (288)
.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.|+++++.. .++.++.+|+.. +++.
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~ 141 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIV 141 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTS
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccC
Confidence 3444555788999999999999999999854569999999999999999986543 689999999998 7776
Q ss_pred CCccceEEeccccccCCCc---cccc----------ceEEEE
Q 023034 246 SSSIDAVHAGAAIHCWSSP---STGV----------GVFFQV 274 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~---~~~l----------G~lvi~ 274 (288)
++||+|+ ++++++ ..++ |.+++.
T Consensus 142 -~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 142 -EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 7899998 556666 4333 777775
No 116
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.35 E-value=5.8e-12 Score=114.02 Aligned_cols=98 Identities=18% Similarity=0.320 Sum_probs=78.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.+. .+|+|+|+|+ |++.|+++++..+ ...++.++.+|+.++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~v~gvD~s~-~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGA-KKVLGVDQSE-ILYQAMDIIRLNK--LEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEESST-HHHHHHHHHHHTT--CTTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCC-CEEEEEChHH-HHHHHHHHHHHcC--CCCcEEEEEeeHHHhcCCC
Confidence 3444555556688999999999999999999863 5999999997 9999999987761 2368999999999999888
Q ss_pred CccceEEecc---ccccCCCccccc
Q 023034 247 SSIDAVHAGA---AIHCWSSPSTGV 268 (288)
Q Consensus 247 ~sfD~V~~~~---vl~h~~d~~~~l 268 (288)
++||+|++.. .+.|..++..++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l 154 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVL 154 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHH
T ss_pred CcEEEEEEcCchhhccCHHHHHHHH
Confidence 9999999876 455555555444
No 117
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.35 E-value=5.3e-12 Score=113.37 Aligned_cols=108 Identities=14% Similarity=0.237 Sum_probs=87.4
Q ss_pred HHHHhhcCC--CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 167 ELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 167 ~~l~~~l~~--~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
..+.+.+.. .++.+|||||||+|.++..+++..+..+++++|++ .+++.|++++...+ ...++.++.+|+.+.++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG--VASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT--CGGGEEEEESCTTTSCC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC--CCcceEEEecccccCCC
Confidence 344455554 56789999999999999999999777799999999 99999999987651 12469999999998777
Q ss_pred CCCccceEEeccccccCCCcc--ccc----------ceEEEEecCc
Q 023034 245 ASSSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLII 278 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~~ 278 (288)
+++ ||+|++.+++||++++. .++ |.+++..+..
T Consensus 230 ~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 230 GND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp CSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 654 99999999999997663 444 8888887654
No 118
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.35 E-value=7.4e-12 Score=114.26 Aligned_cols=105 Identities=12% Similarity=0.126 Sum_probs=85.8
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.|++++...+ ...++.++.+|+.+ +++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG--LADRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTS-CCSC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCC-cCCC
Confidence 3455555556688999999999999999999987789999999 999999999987751 23479999999975 3333
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEec
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTL 276 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~ 276 (288)
.||+|++.+++||++++. .++ |.+++..+
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 399999999999999875 444 88888877
No 119
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.34 E-value=7.4e-12 Score=113.88 Aligned_cols=106 Identities=15% Similarity=0.095 Sum_probs=87.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ...++.++.+|+.+.++++
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG--VADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CTTTEEEEECCTTTSCCCC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC--CCCCEEEEeCccccCCCCC
Confidence 4555666666688999999999999999999987789999999 999999999988751 2346999999999887765
Q ss_pred CccceEEeccccccCCC--ccccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAAIHCWSS--PSTGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d--~~~~l----------G~lvi~t~~ 277 (288)
. |+|++.+++||+++ ...++ |.+++.++.
T Consensus 257 ~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 257 A--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred C--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 4 99999999999988 44444 888887754
No 120
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.34 E-value=4.1e-13 Score=112.29 Aligned_cols=87 Identities=21% Similarity=0.111 Sum_probs=55.5
Q ss_pred HHHHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 167 ELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 167 ~~l~~~l~~-~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+|+.|++.|++++... ..++.++++|+.+ +++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~-~~~ 93 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF----GAVVDWAAADGIE-WLI 93 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HHH
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh----CCceEEEEcchHh-hhh
Confidence 444555543 5688999999999999999999977679999999999999999988765 1278889999877 555
Q ss_pred C-----CccceEEecccc
Q 023034 246 S-----SSIDAVHAGAAI 258 (288)
Q Consensus 246 ~-----~sfD~V~~~~vl 258 (288)
+ ++||+|+++..+
T Consensus 94 ~~~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPY 111 (215)
T ss_dssp HHHHTTCCBSEEEECCCC
T ss_pred hhhhccCcccEEEECCCC
Confidence 5 899999996443
No 121
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.34 E-value=1.1e-12 Score=113.53 Aligned_cols=103 Identities=15% Similarity=0.304 Sum_probs=78.7
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC-------------------------
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP------------------------- 228 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~------------------------- 228 (288)
...++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|++++....+..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 335678999999999999999988775 589999999999999999876530000
Q ss_pred -CCCE-EEEEecCCCCC-CCC---CccceEEeccccc----cCCCccccc----------ceEEEEecC
Q 023034 229 -KENF-LLVRADISRLP-FAS---SSIDAVHAGAAIH----CWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 229 -~~~i-~~~~~d~~~lp-~~~---~sfD~V~~~~vl~----h~~d~~~~l----------G~lvi~t~~ 277 (288)
..++ .++++|+.+.+ +++ ++||+|++..+++ |++++..++ |.+++.+..
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0027 89999998764 355 8999999999999 544555544 888887643
No 122
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.34 E-value=1.1e-11 Score=113.19 Aligned_cols=107 Identities=9% Similarity=0.075 Sum_probs=88.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ...++.+..+|+. .+++.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--l~~~v~~~~~d~~-~~~p~ 267 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG--LADRCEILPGDFF-ETIPD 267 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTT-TCCCS
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC--cCCceEEeccCCC-CCCCC
Confidence 3445555556678999999999999999999988889999999 999999999987751 2468999999998 45555
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~~ 278 (288)
.||+|++.+++||++++. +.+ |++++..+..
T Consensus 268 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 268 -GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred -CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 899999999999999876 344 9998877643
No 123
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.34 E-value=7.5e-13 Score=110.93 Aligned_cols=99 Identities=9% Similarity=0.075 Sum_probs=77.2
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCCCCCccceEEec
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASSSIDAVHAG 255 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~~~~sfD~V~~~ 255 (288)
++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|+++++.. + ..++.++++|+.+ ++..+++||+|++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~-~--~~~v~~~~~D~~~~~~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATL-K--AGNARVVNSNAMSFLAQKGTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT-T--CCSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHc-C--CCcEEEEECCHHHHHhhcCCCCCEEEEC
Confidence 478999999999999998877764 49999999999999999998876 2 2689999999876 56667899999997
Q ss_pred cccccCCCcccc---------c---ceEEEEecCccc
Q 023034 256 AAIHCWSSPSTG---------V---GVFFQVTLIIHV 280 (288)
Q Consensus 256 ~vl~h~~d~~~~---------l---G~lvi~t~~~~~ 280 (288)
..++ ..+...+ | |.+++.+.....
T Consensus 130 ~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 130 PPFR-RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp CSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred CCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 6643 3332222 3 788877765443
No 124
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.34 E-value=1.1e-11 Score=105.04 Aligned_cols=102 Identities=21% Similarity=0.254 Sum_probs=81.3
Q ss_pred CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC---CCCCEEEEEecCCCCCCCCCccc
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRADISRLPFASSSID 250 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~---~~~~i~~~~~d~~~lp~~~~sfD 250 (288)
..++.+|||||||+|.++..+++. ++..+|+|+|+++.+++.+++++... +. ...++.++.+|+...+..+++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD-DPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh-cccccCCCcEEEEECCcccCcccCCCcC
Confidence 456889999999999999999987 45469999999999999999998764 10 02479999999987666678899
Q ss_pred eEEeccccccCCCc-cccc---ceEEEEecC
Q 023034 251 AVHAGAAIHCWSSP-STGV---GVFFQVTLI 277 (288)
Q Consensus 251 ~V~~~~vl~h~~d~-~~~l---G~lvi~t~~ 277 (288)
+|++..+++++.+. .+.| |.+++.+..
T Consensus 154 ~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 154 AIHVGAAAPVVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEECSBBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCchHHHHHHHHHhcCCCcEEEEEEec
Confidence 99999999887543 2233 888887654
No 125
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=2.7e-11 Score=103.85 Aligned_cols=115 Identities=14% Similarity=0.078 Sum_probs=91.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
.....+...+...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++++... + ...++.+..+|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-~-~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 78 KDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKF-N-LGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHT-T-CCTTEEEECSCTTTSC
T ss_pred hhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHc-C-CCCcEEEEEcChhhcc
Confidence 344567777777778999999999999999999884 59999999999999999998775 1 1267999999998754
Q ss_pred CCCCccceEEeccccccCCCccccc----------ceEEEEecCcccHHHHHhh
Q 023034 244 FASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAVS 287 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~~ 287 (288)
+++++||+|++ +.+++..++ |.+++.++....+.++.+.
T Consensus 154 ~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 202 (248)
T 2yvl_A 154 VPEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLES 202 (248)
T ss_dssp CCTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHH
T ss_pred cCCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Confidence 45678999997 455665555 9999999877676666543
No 126
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.33 E-value=7.5e-12 Score=107.91 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----CCCCEEEEEecCCC-CC--CCCCc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF-----PKENFLLVRADISR-LP--FASSS 248 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~-----~~~~i~~~~~d~~~-lp--~~~~s 248 (288)
++.+|||||||+|.++..+++.++...|+|+|+|+.|++.|++++...... ...++.++++|+.+ ++ +++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 477999999999999999999987679999999999999999987653000 13589999999987 66 77889
Q ss_pred cceEEec
Q 023034 249 IDAVHAG 255 (288)
Q Consensus 249 fD~V~~~ 255 (288)
+|.|+..
T Consensus 129 ~d~v~~~ 135 (246)
T 2vdv_E 129 LSKMFFC 135 (246)
T ss_dssp EEEEEEE
T ss_pred cCEEEEE
Confidence 9999853
No 127
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.33 E-value=7.2e-12 Score=107.57 Aligned_cols=93 Identities=18% Similarity=0.100 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC---CCccceE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 252 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~---~~sfD~V 252 (288)
.++.+|||||||+|.++..++...+..+|+|+|+|+.|++.|++++... + ..++.++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL-Q--LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-T--CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCCEEEEeccHHHhcccccccCCccEE
Confidence 3578999999999999999997666679999999999999999998876 2 34699999999887754 6799999
Q ss_pred EeccccccCCCccccc----------ceEEEEe
Q 023034 253 HAGAAIHCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 253 ~~~~vl~h~~d~~~~l----------G~lvi~t 275 (288)
++..+ .++..++ |.+++..
T Consensus 146 ~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 146 TARAV----ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEECC----SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEecc----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 99763 3444433 7777653
No 128
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.33 E-value=3.3e-12 Score=105.93 Aligned_cols=81 Identities=16% Similarity=0.284 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~sfD~V~ 253 (288)
.++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++...+ ...++.++++|+.+++ +.+++||+|+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--LIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--CGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHhhhccCCceEEE
Confidence 45889999999999999999987 345699999999999999999988761 1257999999998875 5668999999
Q ss_pred ecccc
Q 023034 254 AGAAI 258 (288)
Q Consensus 254 ~~~vl 258 (288)
+...+
T Consensus 99 ~~~~~ 103 (197)
T 3eey_A 99 FNLGY 103 (197)
T ss_dssp EEESB
T ss_pred EcCCc
Confidence 98765
No 129
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.33 E-value=7.2e-12 Score=112.69 Aligned_cols=101 Identities=14% Similarity=0.124 Sum_probs=83.9
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceE
Q 023034 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAV 252 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V 252 (288)
+...+..+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ...++.+..+|+. .+++. +||+|
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~-~~~p~-~~D~v 239 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG--LSGRAQVVVGSFF-DPLPA-GAGGY 239 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTT-SCCCC-SCSEE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC--cCcCeEEecCCCC-CCCCC-CCcEE
Confidence 3334568999999999999999999988889999999 999999999987751 2368999999997 45544 89999
Q ss_pred EeccccccCCCc--cccc----------ceEEEEecCc
Q 023034 253 HAGAAIHCWSSP--STGV----------GVFFQVTLII 278 (288)
Q Consensus 253 ~~~~vl~h~~d~--~~~l----------G~lvi~t~~~ 278 (288)
++.+++||++++ .+++ |++++..+..
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 999999999986 4444 9998887653
No 130
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.32 E-value=1.1e-12 Score=115.74 Aligned_cols=98 Identities=18% Similarity=0.250 Sum_probs=70.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCC-------------C--------------
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-------------K-------------- 229 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~-------------~-------------- 229 (288)
++.+|||||||+|.+...++... ..+|+|+|+|+.|++.|++++....+.. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 57899999999999554444432 2499999999999999998764320000 0
Q ss_pred CCEEEEEecCCC-CCC-----CCCccceEEecccccc----CCCccccc----------ceEEEEe
Q 023034 230 ENFLLVRADISR-LPF-----ASSSIDAVHAGAAIHC----WSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 230 ~~i~~~~~d~~~-lp~-----~~~sfD~V~~~~vl~h----~~d~~~~l----------G~lvi~t 275 (288)
..+.++.+|+.. +|+ ++++||+|+++.+++| ++++..++ |.|++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 015677789987 664 3467999999999999 55566555 8888764
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.32 E-value=1e-11 Score=103.75 Aligned_cols=101 Identities=20% Similarity=0.217 Sum_probs=77.4
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|++++...+ ..++.++.+|+.+++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~-~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK---LENIEPVQSRVEEFP-SEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEECCTTTSC-CCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEecchhhCC-ccCCcCEEEEec
Confidence 3789999999999999999998666799999999999999999988762 345999999999876 457899999854
Q ss_pred ccccCCCccccc----------ceEEEEecCcccHHHHHh
Q 023034 257 AIHCWSSPSTGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 257 vl~h~~d~~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+ .++..++ |.+++. .......++.+
T Consensus 141 ~----~~~~~~l~~~~~~L~~gG~l~~~-~~~~~~~~~~~ 175 (207)
T 1jsx_A 141 F----ASLNDMVSWCHHLPGEQGRFYAL-KGQMPEDEIAL 175 (207)
T ss_dssp S----SSHHHHHHHHTTSEEEEEEEEEE-ESSCCHHHHHT
T ss_pred c----CCHHHHHHHHHHhcCCCcEEEEE-eCCCchHHHHH
Confidence 2 2333333 666555 44445555544
No 132
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.32 E-value=1.8e-12 Score=111.05 Aligned_cols=87 Identities=17% Similarity=0.164 Sum_probs=75.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++...+ ...++.++++|+.+++ ++++||+|++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~-~~~~~D~v~~~~ 152 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVYG--IADKIEFICGDFLLLA-SFLKADVVFLSP 152 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHG-GGCCCSEEEECC
T ss_pred CCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC--CCcCeEEEECChHHhc-ccCCCCEEEECC
Confidence 588999999999999999999875 99999999999999999988761 1248999999998876 568999999999
Q ss_pred ccccCCCccccc
Q 023034 257 AIHCWSSPSTGV 268 (288)
Q Consensus 257 vl~h~~d~~~~l 268 (288)
+++|..++...+
T Consensus 153 ~~~~~~~~~~~~ 164 (241)
T 3gdh_A 153 PWGGPDYATAET 164 (241)
T ss_dssp CCSSGGGGGSSS
T ss_pred CcCCcchhhhHH
Confidence 999887765433
No 133
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.32 E-value=1.9e-12 Score=108.40 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=75.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC--CCCc-cceEE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--ASSS-IDAVH 253 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--~~~s-fD~V~ 253 (288)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|++++... +....++.++++|+.++.. .+++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTL-KCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT-TCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHh-CCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 478999999999999998777764 58999999999999999998876 2111589999999876432 3678 99999
Q ss_pred eccccccCCCccc---------cc---ceEEEEecCcc
Q 023034 254 AGAAIHCWSSPST---------GV---GVFFQVTLIIH 279 (288)
Q Consensus 254 ~~~vl~h~~d~~~---------~l---G~lvi~t~~~~ 279 (288)
+...++ ..+... .| |.+++.+....
T Consensus 131 ~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 987743 333222 23 77777765543
No 134
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.32 E-value=2.7e-12 Score=117.65 Aligned_cols=108 Identities=10% Similarity=0.036 Sum_probs=83.7
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-------hcCCCCCCCEEEEEec
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------QESNFPKENFLLVRAD 238 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~-------~~~g~~~~~i~~~~~d 238 (288)
+..+++.+...++.+|||||||+|.++..++...+..+|+|||+++.|++.|+++++ .. |....++.++++|
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~-Gl~~~rVefi~GD 240 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY-GKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH-TBCCCEEEEEECC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh-CCCCCCeEEEECc
Confidence 566777778888999999999999999999877544479999999999999987642 22 2223689999999
Q ss_pred CCCCCCCC--CccceEEeccccccCCCccccc----------ceEEEEe
Q 023034 239 ISRLPFAS--SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 239 ~~~lp~~~--~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t 275 (288)
+.++|+.+ ..||+|+++..+ +.++....| |+|++..
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred ccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEee
Confidence 99998754 479999998776 445555555 6666653
No 135
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.31 E-value=7.2e-12 Score=113.78 Aligned_cols=89 Identities=15% Similarity=0.262 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+ |++.|+++++..+ ...++.++++|++++++++++||+|++.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~-~~v~gvD~s~-~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~fD~Iis~ 140 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGA-RKVIGIECSS-ISDYAVKIVKANK--LDHVVTIIKGKVEEVELPVEKVDIIISE 140 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTC-SEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCSSSCEEEEEEC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCC-CEEEEECcHH-HHHHHHHHHHHcC--CCCcEEEEECcHHHccCCCCceEEEEEc
Confidence 4578999999999999999999853 5999999995 9999999988762 2345999999999999988999999997
Q ss_pred ccccc---CCCccccc
Q 023034 256 AAIHC---WSSPSTGV 268 (288)
Q Consensus 256 ~vl~h---~~d~~~~l 268 (288)
.+.++ ..++..++
T Consensus 141 ~~~~~l~~~~~~~~~l 156 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVL 156 (349)
T ss_dssp CCBBTBTBTCCHHHHH
T ss_pred cccccccCchhHHHHH
Confidence 65443 35555444
No 136
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.31 E-value=8.5e-12 Score=105.86 Aligned_cols=101 Identities=20% Similarity=0.251 Sum_probs=80.6
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhC-----CCCEEEEEeCCHHHHHHHHHHHHhcCCC---CCCCEEEEEecCCCCC---
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRADISRLP--- 243 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~s~~~l~~A~~~~~~~~g~---~~~~i~~~~~d~~~lp--- 243 (288)
..++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++... +. ...++.++.+|+....
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD-KPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGSSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc-CccccccCCEEEEECChHhccccc
Confidence 4568899999999999999999875 3569999999999999999998776 10 0257999999998765
Q ss_pred -CCCCccceEEeccccccCCCcc-ccc---ceEEEEec
Q 023034 244 -FASSSIDAVHAGAAIHCWSSPS-TGV---GVFFQVTL 276 (288)
Q Consensus 244 -~~~~sfD~V~~~~vl~h~~d~~-~~l---G~lvi~t~ 276 (288)
...++||+|++..+++++.+.. +.| |.+++...
T Consensus 157 ~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence 5568899999999999875332 223 77777765
No 137
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.31 E-value=9e-12 Score=113.63 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=82.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~~ 254 (288)
...+|||||||+|.++..+++..+..+++++|+ +.|++.|++++...+ ...++.++.+|+.+. |++ ++||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS--GSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT--TGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC--cccceEEEEccccccCCCCC-CCcCEEEE
Confidence 467999999999999999999988889999999 999999999987651 135799999999875 565 78999999
Q ss_pred ccccccCCCcc--ccc----------ceEEEEecC
Q 023034 255 GAAIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 255 ~~vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
..++||+++++ .++ |++++..+.
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 99999998874 333 889887754
No 138
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.30 E-value=7.4e-12 Score=108.78 Aligned_cols=89 Identities=15% Similarity=0.281 Sum_probs=73.9
Q ss_pred HHHHhhcCCC-CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--
Q 023034 167 ELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (288)
Q Consensus 167 ~~l~~~l~~~-~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (288)
..+..++... ++.+|||+|||+|.++..+++.++ .+|+|+|+++.+++.|++++...+ ...++.++++|+.+++
T Consensus 38 ~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~--~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 38 VLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ--LEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT--CTTTEEEECSCGGGGGGT
T ss_pred HHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC--CcccEEEEECcHHHhhhh
Confidence 3455566666 789999999999999999999876 499999999999999999988761 2357999999998875
Q ss_pred CCCCccceEEecccc
Q 023034 244 FASSSIDAVHAGAAI 258 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl 258 (288)
+++++||+|+++-.+
T Consensus 115 ~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 115 IPKERADIVTCNPPY 129 (259)
T ss_dssp SCTTCEEEEEECCCC
T ss_pred hccCCccEEEECCCC
Confidence 557899999997544
No 139
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.30 E-value=8.7e-13 Score=107.62 Aligned_cols=113 Identities=13% Similarity=0.132 Sum_probs=83.2
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCC
Q 023034 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF 244 (288)
Q Consensus 167 ~~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~ 244 (288)
+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.|++.|+++++..+ ...++.++.+|+.+ ++.
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~ 96 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTK--AENRFTLLKMEAERAIDC 96 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTT--CGGGEEEECSCHHHHHHH
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcHHHhHHh
Confidence 44555554 4567899999999999999999884 3599999999999999999987761 12469999999876 444
Q ss_pred CCCccceEEecccccc--C----CCcc--ccc---ceEEEEecCcccHH
Q 023034 245 ASSSIDAVHAGAAIHC--W----SSPS--TGV---GVFFQVTLIIHVVE 282 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h--~----~d~~--~~l---G~lvi~t~~~~~l~ 282 (288)
.+++||+|++...+++ . .... +.| |.+++.+.....+.
T Consensus 97 ~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~~ 145 (177)
T 2esr_A 97 LTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVLLP 145 (177)
T ss_dssp BCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCCC
T ss_pred hcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCccccc
Confidence 4567999999765421 1 1111 445 88888887665543
No 140
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.30 E-value=2.5e-11 Score=106.39 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=70.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+. .++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++++... + ..++.++++|+.+. ++
T Consensus 99 ~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~-~--~~~v~~~~~d~~~~-~~ 173 (276)
T 2b3t_A 99 VEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL-A--IKNIHILQSDWFSA-LA 173 (276)
T ss_dssp HHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH-T--CCSEEEECCSTTGG-GT
T ss_pred HHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-C--CCceEEEEcchhhh-cc
Confidence 345555554 4578999999999999999998866679999999999999999998876 2 34799999999763 44
Q ss_pred CCccceEEec
Q 023034 246 SSSIDAVHAG 255 (288)
Q Consensus 246 ~~sfD~V~~~ 255 (288)
+++||+|+++
T Consensus 174 ~~~fD~Iv~n 183 (276)
T 2b3t_A 174 GQQFAMIVSN 183 (276)
T ss_dssp TCCEEEEEEC
T ss_pred cCCccEEEEC
Confidence 6789999998
No 141
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.30 E-value=1.5e-11 Score=103.74 Aligned_cols=77 Identities=18% Similarity=0.213 Sum_probs=62.6
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC----CCCCCc
Q 023034 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----PFASSS 248 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l----p~~~~s 248 (288)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.+.++.+.. .++.++.+|+... ++. ++
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~~ 126 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-EK 126 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-CC
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-cc
Confidence 3455788999999999999999998864569999999999887777665543 4788899998873 454 78
Q ss_pred cceEEec
Q 023034 249 IDAVHAG 255 (288)
Q Consensus 249 fD~V~~~ 255 (288)
||+|++.
T Consensus 127 fD~V~~~ 133 (210)
T 1nt2_A 127 VDLIYQD 133 (210)
T ss_dssp EEEEEEC
T ss_pred eeEEEEe
Confidence 9999997
No 142
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=1.2e-11 Score=105.77 Aligned_cols=97 Identities=13% Similarity=0.183 Sum_probs=78.0
Q ss_pred hcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC---CCCCCC
Q 023034 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (288)
Q Consensus 172 ~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~---lp~~~~ 247 (288)
.+..++|.+|||+|||+|.++..+++. |+.++|+|+|+++.|++.++++++.. .++..+.+|... .++..+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCC
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccc
Confidence 456788999999999999999999987 78889999999999999999987654 588999998865 356678
Q ss_pred ccceEEeccccccCCCccccc----------ceEEEEe
Q 023034 248 SIDAVHAGAAIHCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 248 sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t 275 (288)
++|+|++. +.|..++..++ |.++++.
T Consensus 147 ~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 147 GVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 99999864 34444444444 8888764
No 143
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.29 E-value=2e-11 Score=110.92 Aligned_cols=106 Identities=13% Similarity=0.196 Sum_probs=86.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.|++++... + ...++.++.+|+.+ +++.
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~-~~~~ 248 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-G-LSDRVDVVEGDFFE-PLPR 248 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT-T-CTTTEEEEECCTTS-CCSS
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc-C-CCCceEEEeCCCCC-CCCC
Confidence 3445555556688999999999999999999988789999999 99999999998775 1 23479999999875 3333
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
.||+|++.+++||++++. .++ |.+++..+.
T Consensus 249 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 249 -KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 499999999999998874 344 888888766
No 144
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.29 E-value=1e-11 Score=105.86 Aligned_cols=115 Identities=10% Similarity=0.098 Sum_probs=85.5
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+++.. +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++..+ ...++.+..+|+.+...++
T Consensus 13 ~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g--l~~~I~~~~gD~l~~~~~~ 88 (230)
T 3lec_A 13 QKVANYVPK--GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG--LTSKIDVRLANGLSAFEEA 88 (230)
T ss_dssp HHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCGG
T ss_pred HHHHHhCCC--CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECchhhccccc
Confidence 445556654 789999999999999999999876789999999999999999998872 3457999999998766554
Q ss_pred CccceEEeccc----ccc-CCCccccc---ceEEEEecCcccHHHHHhh
Q 023034 247 SSIDAVHAGAA----IHC-WSSPSTGV---GVFFQVTLIIHVVEDLAVS 287 (288)
Q Consensus 247 ~sfD~V~~~~v----l~h-~~d~~~~l---G~lvi~t~~~~~l~el~~~ 287 (288)
..||+|+..+. +.. +++....+ |.|+++... ...+++++
T Consensus 89 ~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~ 135 (230)
T 3lec_A 89 DNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKW 135 (230)
T ss_dssp GCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHH
T ss_pred cccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHH
Confidence 57999886543 222 22333334 788877753 35555543
No 145
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=2.6e-11 Score=106.29 Aligned_cols=96 Identities=19% Similarity=0.180 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEe
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~ 254 (288)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.|+++++..+ ..++.++.+|+.+++. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~---l~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK---LNNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT---CSSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEECChHHcCc-cCCceEEEE
Confidence 345889999999999999999998655799999999999999999998762 3578899999988744 678999999
Q ss_pred ccccccCCCccccc----------ceEEEEecCc
Q 023034 255 GAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 255 ~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
.... +....+ |.++++++..
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7654 333333 8888888765
No 146
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.29 E-value=5.3e-12 Score=103.47 Aligned_cols=112 Identities=17% Similarity=0.083 Sum_probs=82.1
Q ss_pred HHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--
Q 023034 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-- 242 (288)
Q Consensus 166 ~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-- 242 (288)
.+.+.+.+. ..++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++...+ ...++.++++|+.+.
T Consensus 32 ~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 32 KESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGM-DKSICIEKNFAALKVIKENIAITK--EPEKFEVRKMDANRALE 108 (187)
T ss_dssp HHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHhC--CCcceEEEECcHHHHHH
Confidence 344555553 24678999999999999998888653 599999999999999999988761 124799999998763
Q ss_pred --CCCCCccceEEeccccccCCCc---------cccc---ceEEEEecCcccH
Q 023034 243 --PFASSSIDAVHAGAAIHCWSSP---------STGV---GVFFQVTLIIHVV 281 (288)
Q Consensus 243 --p~~~~sfD~V~~~~vl~h~~d~---------~~~l---G~lvi~t~~~~~l 281 (288)
++.+++||+|++...++. .+. .+.| |.+++.+.....+
T Consensus 109 ~~~~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 109 QFYEEKLQFDLVLLDPPYAK-QEIVSQLEKMLERQLLTNEAVIVCETDKTVKL 160 (187)
T ss_dssp HHHHTTCCEEEEEECCCGGG-CCHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred HHHhcCCCCCEEEECCCCCc-hhHHHHHHHHHHhcccCCCCEEEEEeCCcccc
Confidence 223678999999877442 222 2223 8888887766554
No 147
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.29 E-value=1.1e-11 Score=112.25 Aligned_cols=107 Identities=11% Similarity=0.138 Sum_probs=86.2
Q ss_pred HHHhhcCCCC-CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CC
Q 023034 168 LMKGYLKPVL-GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (288)
Q Consensus 168 ~l~~~l~~~~-~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~ 245 (288)
.+...+...+ +.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ...++.++.+|+.+.+ +.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD--LGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CGGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC--CCCceEEEeCCcccCcccC
Confidence 3444444444 78999999999999999999988889999999 889999999887651 2357999999998875 23
Q ss_pred CCccceEEeccccccCCCc--cccc----------ceEEEEecC
Q 023034 246 SSSIDAVHAGAAIHCWSSP--STGV----------GVFFQVTLI 277 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~--~~~l----------G~lvi~t~~ 277 (288)
.+.||+|++.+++||++++ ...+ |++++..+.
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 4669999999999999876 4444 888887753
No 148
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.29 E-value=2.1e-11 Score=107.16 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=80.5
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+...+. ++.+|||+|||+|.++..+++.+.. +|+|+|+|+.|++.|+++++.. + ...++.++++|+.+++. +
T Consensus 117 ~~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n-~-~~~~v~~~~~D~~~~~~-~ 190 (278)
T 2frn_A 117 VRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN-K-VEDRMSAYNMDNRDFPG-E 190 (278)
T ss_dssp HHHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT-T-CTTTEEEECSCTTTCCC-C
T ss_pred HHHHHhCC--CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc-C-CCceEEEEECCHHHhcc-c
Confidence 44555544 4889999999999999999999873 7999999999999999998876 2 23459999999998876 7
Q ss_pred CccceEEeccccccCCCccccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
++||+|++.... +...++ |.+++.+..+
T Consensus 191 ~~fD~Vi~~~p~----~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 191 NIADRILMGYVV----RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCccEEEECCch----hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 899999985432 222233 8888888764
No 149
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=6.4e-12 Score=113.78 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=84.9
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.|++.|++++... ...+.++.+|+...+
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~----~~~~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN----GVEGEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT----TCCCEEEECSTTTTC--
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----CCCCEEEEccccccc--
Confidence 45667777555678999999999999999999987679999999999999999998876 344677889987654
Q ss_pred CCccceEEeccccccC-----CCccccc----------ceEEEEecCc
Q 023034 246 SSSIDAVHAGAAIHCW-----SSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~-----~d~~~~l----------G~lvi~t~~~ 278 (288)
+++||+|+++.++|+. .+...++ |.+++.+...
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 6799999999988752 2233333 8888877554
No 150
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.29 E-value=2.2e-11 Score=106.03 Aligned_cols=88 Identities=14% Similarity=0.085 Sum_probs=73.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCCCCEEEEEecCCCC-
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFPKENFLLVRADISRL- 242 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~---~~g~~~~~i~~~~~d~~~l- 242 (288)
..+..++...++.+|||+|||+|.++..++++.+..+|+|+|+++.+++.|++++.. . + ...++.++++|+.++
T Consensus 26 ~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~-l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 26 MLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA-A-FSARIEVLEADVTLRA 103 (260)
T ss_dssp HHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT-T-TGGGEEEEECCTTCCH
T ss_pred HHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC-C-CcceEEEEeCCHHHHh
Confidence 345566666678899999999999999999998767999999999999999999876 4 1 123699999999987
Q ss_pred ------CCCCCccceEEecc
Q 023034 243 ------PFASSSIDAVHAGA 256 (288)
Q Consensus 243 ------p~~~~sfD~V~~~~ 256 (288)
++++++||+|+++-
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nP 123 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNP 123 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECC
T ss_pred hhhhhhccCCCCcCEEEECC
Confidence 35678999999973
No 151
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.28 E-value=1.6e-11 Score=108.40 Aligned_cols=94 Identities=11% Similarity=0.082 Sum_probs=77.8
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.+++++...+ ...++.++++|+.+++++
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTP--VASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTST--TGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcC--CCCceEEEEcceecccch
Confidence 46677777777789999999999999999999976 99999999999999999876541 125799999999988765
Q ss_pred CCccceEEec-----------cccccCCCcc
Q 023034 246 SSSIDAVHAG-----------AAIHCWSSPS 265 (288)
Q Consensus 246 ~~sfD~V~~~-----------~vl~h~~d~~ 265 (288)
+||+|+++ .+++|.+++.
T Consensus 93 --~fD~vv~nlpy~~~~~~~~~~l~~~~~~~ 121 (285)
T 1zq9_A 93 --FFDTCVANLPYQISSPFVFKLLLHRPFFR 121 (285)
T ss_dssp --CCSEEEEECCGGGHHHHHHHHHHCSSCCS
T ss_pred --hhcEEEEecCcccchHHHHHHHhcCcchh
Confidence 79999996 4667766654
No 152
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.28 E-value=1.6e-11 Score=108.85 Aligned_cols=88 Identities=10% Similarity=0.145 Sum_probs=76.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
...+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.|++.+++++.. ..++.++++|+..++
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALKVD 109 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTTSC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhhCC
Confidence 3356777778777889999999999999999999865 999999999999999999874 368999999999999
Q ss_pred CCCCccceEEecccc
Q 023034 244 FASSSIDAVHAGAAI 258 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl 258 (288)
+++.+||+|+++...
T Consensus 110 ~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 110 LNKLDFNKVVANLPY 124 (295)
T ss_dssp GGGSCCSEEEEECCG
T ss_pred cccCCccEEEEeCcc
Confidence 888889999987543
No 153
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.28 E-value=3.3e-12 Score=110.91 Aligned_cols=105 Identities=12% Similarity=0.138 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||+|||+|.++..+++.++ +|+|+|+++.+++.|++++... + ..+.+..+|+... +++++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~-~---~~v~~~~~d~~~~-~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN-G---VRPRFLEGSLEAA-LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT-T---CCCEEEESCHHHH-GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc-C---CcEEEEECChhhc-CcCCCCCEEEEC
Confidence 4578999999999999999999887 9999999999999999998876 2 2288899888762 446789999998
Q ss_pred cccccCCCc----cccc---ceEEEEecCcccHHHHHhh
Q 023034 256 AAIHCWSSP----STGV---GVFFQVTLIIHVVEDLAVS 287 (288)
Q Consensus 256 ~vl~h~~d~----~~~l---G~lvi~t~~~~~l~el~~~ 287 (288)
...+++... .+.+ |.++++.+......++.+.
T Consensus 192 ~~~~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~ 230 (254)
T 2nxc_A 192 LYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREA 230 (254)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHH
Confidence 766654222 2222 9999988887777776653
No 154
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.28 E-value=2.6e-11 Score=100.86 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEe
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~ 254 (288)
..++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++ .++.++++|+.+++ ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGA-ESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTB-SEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEEE
Confidence 44678999999999999999998843 47999999999999999873 27889999999875 68999999
Q ss_pred ccccccCCC
Q 023034 255 GAAIHCWSS 263 (288)
Q Consensus 255 ~~vl~h~~d 263 (288)
+..++|+.+
T Consensus 117 ~~p~~~~~~ 125 (200)
T 1ne2_A 117 NPPFGSVVK 125 (200)
T ss_dssp CCCC-----
T ss_pred CCCchhccC
Confidence 999999865
No 155
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.27 E-value=2.3e-12 Score=103.97 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=76.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-C--CCCccceE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F--ASSSIDAV 252 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p-~--~~~sfD~V 252 (288)
++.+|||+|||+|.++..+++.++ .|+|+|+|+.|++.|++++... + .++.++++|+.+. + + ..++||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~-~---~~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT-G---LGARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH-T---CCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc-C---CceEEEeccHHHHHHhhhccCCceEEE
Confidence 478999999999999999999987 6999999999999999998877 2 2889999998763 2 1 13489999
Q ss_pred Eeccccc-cCCC----cc--ccc---ceEEEEecCcccH
Q 023034 253 HAGAAIH-CWSS----PS--TGV---GVFFQVTLIIHVV 281 (288)
Q Consensus 253 ~~~~vl~-h~~d----~~--~~l---G~lvi~t~~~~~l 281 (288)
++...++ +.++ .. +.| |.+++.+.....+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred EECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 9987664 1111 11 334 8888888766544
No 156
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.27 E-value=4.2e-12 Score=107.64 Aligned_cols=114 Identities=8% Similarity=0.103 Sum_probs=83.4
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA 245 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~~ 245 (288)
.+...+...++.+|||||||+|..+..+++.. +..+|+++|+++.|++.|+++++..+ ...++.++++|+.+ ++..
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 49 IMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--LQDKVTILNGASQDLIPQL 126 (221)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHGGGT
T ss_pred HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--CCCceEEEECCHHHHHHHH
Confidence 33333333457899999999999999999863 35699999999999999999988762 13469999999854 3322
Q ss_pred -----CCccceEEeccccccCCCcc------ccc---ceEEEEecCcccHHH
Q 023034 246 -----SSSIDAVHAGAAIHCWSSPS------TGV---GVFFQVTLIIHVVED 283 (288)
Q Consensus 246 -----~~sfD~V~~~~vl~h~~d~~------~~l---G~lvi~t~~~~~l~e 283 (288)
.++||+|++....++..+.. +.| |.+++.........+
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~ 178 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPD 178 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESCCCCCCCHH
T ss_pred HHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEeCCCCcchHH
Confidence 27899999988777765432 344 888777665444333
No 157
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.26 E-value=1.8e-11 Score=112.18 Aligned_cols=90 Identities=13% Similarity=0.207 Sum_probs=73.9
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+...+...++.+|||||||+|.++..+++.+. .+|+|+|+| .|++.|+++++..+ ...++.++++|+++++++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~- 127 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANN--LDHIVEVIEGSVEDISLP- 127 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTT--CTTTEEEEESCGGGCCCS-
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcC--CCCeEEEEECchhhcCcC-
Confidence 3444445556789999999999999999999864 599999999 99999999988762 235699999999998876
Q ss_pred CccceEEeccccccC
Q 023034 247 SSIDAVHAGAAIHCW 261 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~ 261 (288)
++||+|++..+.+++
T Consensus 128 ~~~D~Iv~~~~~~~l 142 (376)
T 3r0q_C 128 EKVDVIISEWMGYFL 142 (376)
T ss_dssp SCEEEEEECCCBTTB
T ss_pred CcceEEEEcChhhcc
Confidence 899999996655544
No 158
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.26 E-value=1.3e-11 Score=110.91 Aligned_cols=105 Identities=17% Similarity=0.106 Sum_probs=85.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+.+.+...+ .+|||||||+|.++..+++..+..+++++|+ +.+++.|++++...+ ...++.++.+|+.+ +++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEESCTTT-CCC-
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecCCCCC-CCC-
Confidence 44455554444 8999999999999999999987779999999 999999999876541 13579999999987 554
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
++||+|++.+++||++++. .++ |++++..+.
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 6799999999999998776 444 889888764
No 159
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=1.7e-11 Score=105.34 Aligned_cols=114 Identities=12% Similarity=0.113 Sum_probs=83.9
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+++.. +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++..+ ...++.+..+|+.+...++
T Consensus 13 ~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~I~v~~gD~l~~~~~~ 88 (244)
T 3gnl_A 13 EKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG--LTEQIDVRKGNGLAVIEKK 88 (244)
T ss_dssp HHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCGG
T ss_pred HHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEecchhhccCcc
Confidence 455666654 789999999999999999999876789999999999999999998872 2456999999998765444
Q ss_pred CccceEEeccc----ccc-CCCccccc---ceEEEEecCcccHHHHHh
Q 023034 247 SSIDAVHAGAA----IHC-WSSPSTGV---GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 247 ~sfD~V~~~~v----l~h-~~d~~~~l---G~lvi~t~~~~~l~el~~ 286 (288)
..||+|+..+. +.. +++....+ |.|+++... ....+++
T Consensus 89 ~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~ 134 (244)
T 3gnl_A 89 DAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNI--AAWQLRE 134 (244)
T ss_dssp GCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHH
T ss_pred ccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcCC--ChHHHHH
Confidence 46999886543 322 23333333 777777643 3444444
No 160
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=3.5e-11 Score=109.21 Aligned_cols=93 Identities=14% Similarity=0.257 Sum_probs=76.5
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.+. .+|+|+|+|+ |++.|+++++..+ ...++.++.+|+.+++++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~~~--l~~~v~~~~~d~~~~~~~- 114 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGA-RKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSLP- 114 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCCC-CEEEEECCHH-HHHHHHHHHHHcC--CCCcEEEEEcchhhCCCC-
Confidence 4455555556788999999999999999998753 5999999997 9999999887751 236899999999998765
Q ss_pred CccceEEeccccccCCCc
Q 023034 247 SSIDAVHAGAAIHCWSSP 264 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~ 264 (288)
++||+|++..+++|+...
T Consensus 115 ~~~D~Ivs~~~~~~~~~~ 132 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNE 132 (348)
T ss_dssp SCEEEEEECCCBTTBTTT
T ss_pred CceeEEEEeCchhcCChH
Confidence 689999999998888644
No 161
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=2.1e-11 Score=103.66 Aligned_cols=109 Identities=17% Similarity=0.285 Sum_probs=81.3
Q ss_pred HHHhhc--CCCCCCeEEEEcCccchHHHHHHHhCC------CCEEEEEeCCHHHHHHHHHHHHhcCC--CCCCCEEEEEe
Q 023034 168 LMKGYL--KPVLGGNIIDASCGSGLFSRIFAKSGL------FSLVVALDYSENMLKQCYEFVQQESN--FPKENFLLVRA 237 (288)
Q Consensus 168 ~l~~~l--~~~~~~~VLDiGcG~G~~~~~l~~~~~------~~~v~gvD~s~~~l~~A~~~~~~~~g--~~~~~i~~~~~ 237 (288)
.+.+.+ ...++.+|||||||+|.++..+++... ..+|+++|+++.+++.|++++...+. ....++.++.+
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG 152 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC
Confidence 344444 345688999999999999999988532 24899999999999999998876400 00247999999
Q ss_pred cCCCCCCCC-CccceEEeccccccCCCcc-ccc---ceEEEEecC
Q 023034 238 DISRLPFAS-SSIDAVHAGAAIHCWSSPS-TGV---GVFFQVTLI 277 (288)
Q Consensus 238 d~~~lp~~~-~sfD~V~~~~vl~h~~d~~-~~l---G~lvi~t~~ 277 (288)
|+.. ++++ ++||+|++..+++|+++.. +.| |.+++....
T Consensus 153 d~~~-~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 153 DGRK-GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CGGG-CCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred Cccc-CCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEec
Confidence 9986 4444 7899999999999886332 223 888887764
No 162
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.25 E-value=1.6e-11 Score=99.04 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--------CC
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------FA 245 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--------~~ 245 (288)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ |++ ..++.++.+|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456889999999999999999988 5557999999999 753 246889999999877 77
Q ss_pred CCccceEEeccccccCCCc-----------cccc----------ceEEEEecCcccHHHHHh
Q 023034 246 SSSIDAVHAGAAIHCWSSP-----------STGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~-----------~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+++||+|++..++++..++ ..++ |.+++.++......++.+
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 147 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLR 147 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHH
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHH
Confidence 7899999999998887665 3444 999998888777666543
No 163
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.25 E-value=9.5e-12 Score=106.35 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=73.3
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P- 243 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p- 243 (288)
.+.+...+...++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++++..+ ...++.++.+|+.+. +
T Consensus 60 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 60 LDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH--FENQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCHHH
T ss_pred HHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHHHHh
Confidence 344444444445789999999999999999997666799999999999999999998762 235899999999764 4
Q ss_pred CCCCccceEEecccccc
Q 023034 244 FASSSIDAVHAGAAIHC 260 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h 260 (288)
..+++||+|++.....+
T Consensus 138 ~~~~~fD~V~~~~~~~~ 154 (232)
T 3ntv_A 138 VNDKVYDMIFIDAAKAQ 154 (232)
T ss_dssp HTTSCEEEEEEETTSSS
T ss_pred hccCCccEEEEcCcHHH
Confidence 33689999998765443
No 164
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.25 E-value=9.7e-12 Score=109.13 Aligned_cols=88 Identities=11% Similarity=0.156 Sum_probs=67.0
Q ss_pred CCCeEEEEcCccch----HHHHHHHh-CC---CCEEEEEeCCHHHHHHHHHHHHhc---CCC----------------C-
Q 023034 177 LGGNIIDASCGSGL----FSRIFAKS-GL---FSLVVALDYSENMLKQCYEFVQQE---SNF----------------P- 228 (288)
Q Consensus 177 ~~~~VLDiGcG~G~----~~~~l~~~-~~---~~~v~gvD~s~~~l~~A~~~~~~~---~g~----------------~- 228 (288)
++.+|||+|||+|. ++..+++. +. ..+|+|+|+|+.|++.|++.+... .+. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35789999999998 55666665 21 249999999999999999864100 000 0
Q ss_pred --------CCCEEEEEecCCCCCCC-CCccceEEeccccccCCCc
Q 023034 229 --------KENFLLVRADISRLPFA-SSSIDAVHAGAAIHCWSSP 264 (288)
Q Consensus 229 --------~~~i~~~~~d~~~lp~~-~~sfD~V~~~~vl~h~~d~ 264 (288)
..++.|.++|+.+.|++ .+.||+|+|.++++|++++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~ 229 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKT 229 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHH
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHH
Confidence 03689999999987665 5789999999999999766
No 165
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=2.7e-11 Score=109.05 Aligned_cols=89 Identities=20% Similarity=0.337 Sum_probs=71.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||||||+|.++..+++.+. .+|+|+|+| .|++.|+++++.. + ...++.++.+|+.++++++++||+|++.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~-~~v~~vD~s-~~~~~a~~~~~~~-~-~~~~i~~~~~d~~~~~~~~~~~D~Ivs~ 112 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGA-KHVIGVDMS-SIIEMAKELVELN-G-FSDKITLLRGKLEDVHLPFPKVDIIISE 112 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCC-SEEEEEESS-THHHHHHHHHHHT-T-CTTTEEEEESCTTTSCCSSSCEEEEEEC
T ss_pred cCCCEEEEecCccHHHHHHHHHCCC-CEEEEEChH-HHHHHHHHHHHHc-C-CCCCEEEEECchhhccCCCCcccEEEEe
Confidence 4578999999999999999998853 599999999 5999999998775 1 2457999999999998888899999997
Q ss_pred cc---cccCCCccccc
Q 023034 256 AA---IHCWSSPSTGV 268 (288)
Q Consensus 256 ~v---l~h~~d~~~~l 268 (288)
.+ +.+..++..++
T Consensus 113 ~~~~~l~~~~~~~~~l 128 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVL 128 (328)
T ss_dssp CCBTTBSTTCCHHHHH
T ss_pred CchhhcccHHHHHHHH
Confidence 54 33444444443
No 166
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.24 E-value=8.5e-11 Score=98.12 Aligned_cols=81 Identities=19% Similarity=0.227 Sum_probs=69.3
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEE
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~ 253 (288)
...++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++... ..++.++++|+.+++ ++||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEF----KGKFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGG----TTSEEEEESCGGGCC---CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHc----CCCEEEEECchHHcC---CCCCEEE
Confidence 345688999999999999999998864 48999999999999999998776 228999999999875 4899999
Q ss_pred eccccccCC
Q 023034 254 AGAAIHCWS 262 (288)
Q Consensus 254 ~~~vl~h~~ 262 (288)
++..+++..
T Consensus 118 ~~~p~~~~~ 126 (207)
T 1wy7_A 118 MNPPFGSQR 126 (207)
T ss_dssp ECCCCSSSS
T ss_pred EcCCCcccc
Confidence 988877664
No 167
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.24 E-value=4.6e-11 Score=109.44 Aligned_cols=117 Identities=14% Similarity=0.087 Sum_probs=88.3
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 165 ~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
....+.... ..++.+|||+|||+|.++..++..+...+|+|+|+|+.|++.|++++...+ ...++.+.++|+.++++
T Consensus 206 la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g--l~~~i~~~~~D~~~~~~ 282 (373)
T 3tm4_A 206 IANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG--VLDKIKFIQGDATQLSQ 282 (373)
T ss_dssp HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT--CGGGCEEEECCGGGGGG
T ss_pred HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhhCCc
Confidence 344455555 566889999999999999999998865689999999999999999998762 12579999999999998
Q ss_pred CCCccceEEeccccccCCC-------c-cccc--------ceEEEEecCcccHHHH
Q 023034 245 ASSSIDAVHAGAAIHCWSS-------P-STGV--------GVFFQVTLIIHVVEDL 284 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h~~d-------~-~~~l--------G~lvi~t~~~~~l~el 284 (288)
++++||+|+++-.+..-.. . ..++ |.+++.+.....+.++
T Consensus 283 ~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~~~~~~~~~ 338 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFITTEKKAIEEA 338 (373)
T ss_dssp TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEESCHHHHHHH
T ss_pred ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 8899999999755332111 1 1111 7777777766666544
No 168
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.23 E-value=2.1e-11 Score=106.43 Aligned_cols=109 Identities=17% Similarity=0.054 Sum_probs=79.7
Q ss_pred HHHhhcCC-CCCCeEEEEcCcc---chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 168 LMKGYLKP-VLGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 168 ~l~~~l~~-~~~~~VLDiGcG~---G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
.+..++.. ....+|||||||+ |.....+.+..+..+|+++|.|+.|++.|++++... ...++.++++|+.+++
T Consensus 68 rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 68 RAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEADMLDPA 144 (277)
T ss_dssp HHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEECCTTCHH
T ss_pred HHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEecccChh
Confidence 34445542 2346899999996 444455555567789999999999999999987653 1357999999998852
Q ss_pred ------CCCCccc-----eEEeccccccCCCcc---ccc----------ceEEEEecCcc
Q 023034 244 ------FASSSID-----AVHAGAAIHCWSSPS---TGV----------GVFFQVTLIIH 279 (288)
Q Consensus 244 ------~~~~sfD-----~V~~~~vl~h~~d~~---~~l----------G~lvi~t~~~~ 279 (288)
...+.|| +|+++.+|||+++.+ .++ |.|+++.+..+
T Consensus 145 ~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 145 SILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred hhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 1134566 688999999999964 344 88999887654
No 169
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.23 E-value=4.6e-11 Score=108.54 Aligned_cols=119 Identities=19% Similarity=0.087 Sum_probs=91.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
+.....+.......++.+|||+|||+|.++..++..+ +..+++|+|+++.|++.|+++++.. | ..++.+.++|+.+
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~-g--~~~i~~~~~D~~~ 265 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS-G--LSWIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT-T--CTTCEEEECCGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc-C--CCceEEEeCChhh
Confidence 3445566666676778899999999999999999976 5569999999999999999999887 2 2389999999999
Q ss_pred CCCCCCccceEEeccccccCCC---------------ccccc---ceEEEEecCcccHHHH
Q 023034 242 LPFASSSIDAVHAGAAIHCWSS---------------PSTGV---GVFFQVTLIIHVVEDL 284 (288)
Q Consensus 242 lp~~~~sfD~V~~~~vl~h~~d---------------~~~~l---G~lvi~t~~~~~l~el 284 (288)
++.+.+.||+|+++-....... ..+.+ |.+++.+.....+.++
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~~~ 326 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRA 326 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHHHH
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 9877788999999644332111 11111 9999998876555443
No 170
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.22 E-value=3.4e-11 Score=111.90 Aligned_cols=109 Identities=8% Similarity=-0.058 Sum_probs=80.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHH-------HHHHHhcCCCCCCCEEEEE
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQC-------YEFVQQESNFPKENFLLVR 236 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A-------~~~~~~~~g~~~~~i~~~~ 236 (288)
.....+.+.+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| ++++... |....++.+++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~-Gl~~~nV~~i~ 307 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY-GMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT-TBCCCCEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc-CCCCCceEEEE
Confidence 345666677777789999999999999999999875445899999999999988 8877765 22136899999
Q ss_pred ecCCCC--CC--CCCccceEEeccccccCCCccccc----------ceEEEE
Q 023034 237 ADISRL--PF--ASSSIDAVHAGAAIHCWSSPSTGV----------GVFFQV 274 (288)
Q Consensus 237 ~d~~~l--p~--~~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~ 274 (288)
+|.... ++ ..++||+|+++.++ +.+++...+ |.+++.
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 865532 22 24789999998776 345554433 777766
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.21 E-value=1.7e-11 Score=104.28 Aligned_cols=92 Identities=9% Similarity=0.046 Sum_probs=70.6
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-C
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F 244 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p-~ 244 (288)
.+.......++.+|||||||+|..+..+++.. +.++|+++|+++.+++.|+++++.. |....++.++.+|+.+. + +
T Consensus 47 ~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-g~~~~~i~~~~gda~~~l~~~ 125 (221)
T 3dr5_A 47 TLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA-GYSPSRVRFLLSRPLDVMSRL 125 (221)
T ss_dssp HHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT-TCCGGGEEEECSCHHHHGGGS
T ss_pred HHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CCCcCcEEEEEcCHHHHHHHh
Confidence 33333344345599999999999999999874 3579999999999999999999886 22115799999998764 2 3
Q ss_pred CCCccceEEecccccc
Q 023034 245 ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h 260 (288)
.+++||+|++.....+
T Consensus 126 ~~~~fD~V~~d~~~~~ 141 (221)
T 3dr5_A 126 ANDSYQLVFGQVSPMD 141 (221)
T ss_dssp CTTCEEEEEECCCTTT
T ss_pred cCCCcCeEEEcCcHHH
Confidence 3689999998765443
No 172
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.21 E-value=2.6e-11 Score=110.81 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=79.7
Q ss_pred HHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 168 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
.+.+.+. ..++.+|||||||+|.++..+++.++..+++++|+ +.|++.|++ ..++.++.+|+.+ +++.
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC
Confidence 3444443 44578999999999999999999988789999999 999987764 2569999999987 6654
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
||+|++.+++||++++. .++ |++++..+.
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999999999999887 555 888888653
No 173
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.21 E-value=5.1e-11 Score=101.61 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=66.8
Q ss_pred hcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC---CCCCCC
Q 023034 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (288)
Q Consensus 172 ~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~---lp~~~~ 247 (288)
.+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.|++.+.++++.. .++.++.+|+.+ +++.++
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCC
Confidence 344567889999999999999999987 35569999999999888888776653 579999999987 455678
Q ss_pred ccceEEeccc
Q 023034 248 SIDAVHAGAA 257 (288)
Q Consensus 248 sfD~V~~~~v 257 (288)
+||+|++...
T Consensus 147 ~~D~V~~~~~ 156 (233)
T 2ipx_A 147 MVDVIFADVA 156 (233)
T ss_dssp CEEEEEECCC
T ss_pred cEEEEEEcCC
Confidence 9999999544
No 174
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.20 E-value=5.3e-11 Score=101.28 Aligned_cols=113 Identities=12% Similarity=0.155 Sum_probs=81.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCC-CCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS-RLPFA 245 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~-~lp~~ 245 (288)
+.+..++.. +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++..+ ...++.+..+|+. .++.
T Consensus 7 ~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 7 ELVASFVSQ--GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG--LKEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-
T ss_pred HHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECchhhhccc-
Confidence 445555554 789999999999999999999877789999999999999999998872 2357999999985 4442
Q ss_pred CCccceEEeccc----ccc-CCCccccc---ceEEEEecCcccHHHHHh
Q 023034 246 SSSIDAVHAGAA----IHC-WSSPSTGV---GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 246 ~~sfD~V~~~~v----l~h-~~d~~~~l---G~lvi~t~~~~~l~el~~ 286 (288)
...||+|+..+. +.. +++....+ |.|++... .....+++
T Consensus 82 ~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~ 128 (225)
T 3kr9_A 82 TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN--NREDDLRI 128 (225)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHH
T ss_pred CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHH
Confidence 226998886543 222 23333333 77777655 34455544
No 175
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.20 E-value=7.1e-11 Score=100.78 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||||||+|.++..+. +..+|+|+|+++.|++.+++++... ..+..+.++|....+++ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~----g~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK----DWDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT----TCEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeecccCCCC-CCcchHHHH
Confidence 457799999999999999887 4469999999999999999998776 47888999999987765 489999999
Q ss_pred cccccCCCccccc----------ceEEEEec
Q 023034 256 AAIHCWSSPSTGV----------GVFFQVTL 276 (288)
Q Consensus 256 ~vl~h~~d~~~~l----------G~lvi~t~ 276 (288)
-++||+++..+.. +.++++-+
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 9999986654433 77777766
No 176
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.19 E-value=2.8e-11 Score=103.21 Aligned_cols=109 Identities=17% Similarity=0.139 Sum_probs=81.3
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF 244 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~ 244 (288)
...+...+...++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+ ...++.++.+|+.+. +.
T Consensus 43 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 43 MESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG--LESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCGGGSHHH
T ss_pred HHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHHHHh
Confidence 344444444456789999999999999999998766799999999999999999988762 234699999998864 43
Q ss_pred C--CCccceEEeccccccCC----Cccccc---ceEEEEec
Q 023034 245 A--SSSIDAVHAGAAIHCWS----SPSTGV---GVFFQVTL 276 (288)
Q Consensus 245 ~--~~sfD~V~~~~vl~h~~----d~~~~l---G~lvi~t~ 276 (288)
. +++||+|++....+... ...+.| |.+++.+.
T Consensus 121 ~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred cccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3 57899999987764221 122223 88887654
No 177
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.18 E-value=2.8e-10 Score=97.39 Aligned_cols=94 Identities=14% Similarity=0.134 Sum_probs=71.6
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC---CCCCcc
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSI 249 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp---~~~~sf 249 (288)
...++.+|||+|||+|.++..+++. ++.++|+|+|+|+.|++...+..+.. .++.++++|+.... ...++|
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccccchhhhccccce
Confidence 4678999999999999999999886 55679999999999986665544432 58999999998643 124689
Q ss_pred ceEEeccccccCCCccc--------cc---ceEEEEe
Q 023034 250 DAVHAGAAIHCWSSPST--------GV---GVFFQVT 275 (288)
Q Consensus 250 D~V~~~~vl~h~~d~~~--------~l---G~lvi~t 275 (288)
|+|++.... ++... +| |.|+++.
T Consensus 148 D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 148 DVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 999998654 33322 23 8888874
No 178
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.17 E-value=9e-11 Score=97.44 Aligned_cols=98 Identities=14% Similarity=0.232 Sum_probs=74.8
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC---------
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGL--FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------- 243 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~--~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--------- 243 (288)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.+ . ..++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~----~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------P----IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------C----CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------C----CCCceEEEccccchhhhhhccccc
Confidence 34578999999999999999998865 5799999999921 1 357889999998876
Q ss_pred ----------------CCCCccceEEeccccccCC----Cccc-------cc----------ceEEEEecCcccHHHHHh
Q 023034 244 ----------------FASSSIDAVHAGAAIHCWS----SPST-------GV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 244 ----------------~~~~sfD~V~~~~vl~h~~----d~~~-------~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+++++||+|++..++++.. +... ++ |.|++.++......++.+
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~ 165 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKT 165 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHH
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHH
Confidence 5678999999988776642 2211 12 999988887776666543
No 179
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.17 E-value=1.5e-10 Score=99.91 Aligned_cols=82 Identities=12% Similarity=0.061 Sum_probs=65.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC---CCC---CCccc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFA---SSSID 250 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l---p~~---~~sfD 250 (288)
++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.|++++... + ...++.++++|+.+. +++ +++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-N-LSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT-T-CTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc-C-CCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 467999999999999998888754469999999999999999998876 2 234599999998762 444 26899
Q ss_pred eEEecccccc
Q 023034 251 AVHAGAAIHC 260 (288)
Q Consensus 251 ~V~~~~vl~h 260 (288)
+|+++-.+++
T Consensus 143 ~i~~npp~~~ 152 (254)
T 2h00_A 143 FCMCNPPFFA 152 (254)
T ss_dssp EEEECCCCC-
T ss_pred EEEECCCCcc
Confidence 9999855443
No 180
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.17 E-value=1.3e-10 Score=109.64 Aligned_cols=93 Identities=15% Similarity=0.263 Sum_probs=75.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ |++.|+++++.. | ...++.++.+|+.+++++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~-g-l~~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN-N-LTDRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHT-T-CTTTEEEEESCTTTCCCS-
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHc-C-CCCcEEEEECchhhCccC-
Confidence 344555554568899999999999999998864 36999999999 999999998876 1 236899999999988765
Q ss_pred CccceEEeccccccCCCc
Q 023034 247 SSIDAVHAGAAIHCWSSP 264 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~ 264 (288)
++||+|++..+++|+.+.
T Consensus 223 ~~fD~Ivs~~~~~~~~~e 240 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNE 240 (480)
T ss_dssp SCEEEEECCCCHHHHTCH
T ss_pred CCeEEEEEeCchHhcCcH
Confidence 589999998888877543
No 181
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.17 E-value=8.2e-11 Score=101.49 Aligned_cols=83 Identities=17% Similarity=0.307 Sum_probs=68.5
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
...+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.+++++.. ..++.++++|+.+++
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQFK 89 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGGCC
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHhCC
Confidence 3346677777777789999999999999999999985 999999999999999998653 258999999999988
Q ss_pred CCC-CccceEEe
Q 023034 244 FAS-SSIDAVHA 254 (288)
Q Consensus 244 ~~~-~sfD~V~~ 254 (288)
+++ ..|+ |++
T Consensus 90 ~~~~~~~~-vv~ 100 (244)
T 1qam_A 90 FPKNQSYK-IFG 100 (244)
T ss_dssp CCSSCCCE-EEE
T ss_pred cccCCCeE-EEE
Confidence 764 4554 444
No 182
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.17 E-value=8e-11 Score=107.58 Aligned_cols=74 Identities=20% Similarity=0.361 Sum_probs=64.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
++++|||||||+|.++..+++.|. .+|+|+|.|+ |++.|++.++.+ ....++.++.+|++++.++ ++||+|++-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n--~~~~~i~~i~~~~~~~~lp-e~~DvivsE 156 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFN--GLEDRVHVLPGPVETVELP-EQVDAIVSE 156 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHc--CCCceEEEEeeeeeeecCC-ccccEEEee
Confidence 588999999999999999998886 5899999996 899999988876 2457899999999998876 689999983
No 183
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.16 E-value=3.3e-11 Score=102.76 Aligned_cols=77 Identities=19% Similarity=0.216 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCC-HHHHHHH---HHHHHhcCCCCCCCEEEEEecCCCCCCC-CCccc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYS-ENMLKQC---YEFVQQESNFPKENFLLVRADISRLPFA-SSSID 250 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s-~~~l~~A---~~~~~~~~g~~~~~i~~~~~d~~~lp~~-~~sfD 250 (288)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.|++.| ++++... + ..++.++++|++.+|.. .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-~--~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG-G--LSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT-C--CSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc-C--CCCeEEEEcCHHHhhhhccCeEE
Confidence 35789999999999999999987777799999999 7787777 6666554 1 45799999999998632 13444
Q ss_pred eEEec
Q 023034 251 AVHAG 255 (288)
Q Consensus 251 ~V~~~ 255 (288)
.|+++
T Consensus 100 ~i~~~ 104 (225)
T 3p2e_A 100 SISIL 104 (225)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44443
No 184
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.16 E-value=1e-10 Score=101.60 Aligned_cols=84 Identities=11% Similarity=0.197 Sum_probs=70.5
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
...+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.|++.+++++.. ..++.++++|+.+++
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQFD 88 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTTCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHhCC
Confidence 3356777788877899999999999999999999875 999999999999999998754 258999999999988
Q ss_pred CCC----CccceEEec
Q 023034 244 FAS----SSIDAVHAG 255 (288)
Q Consensus 244 ~~~----~sfD~V~~~ 255 (288)
+++ +.|| |+++
T Consensus 89 ~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 89 FSSVKTDKPLR-VVGN 103 (255)
T ss_dssp GGGSCCSSCEE-EEEE
T ss_pred HHHhccCCCeE-EEec
Confidence 653 4688 5554
No 185
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.15 E-value=3.1e-10 Score=96.22 Aligned_cols=80 Identities=14% Similarity=0.249 Sum_probs=65.3
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC---CCCCc
Q 023034 173 LKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSS 248 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp---~~~~s 248 (288)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.|++.++++++.. .++.++.+|+.+.. ...++
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCC
Confidence 33567889999999999999999987 45569999999999999999887653 68999999998732 12368
Q ss_pred cceEEeccc
Q 023034 249 IDAVHAGAA 257 (288)
Q Consensus 249 fD~V~~~~v 257 (288)
||+|++...
T Consensus 144 ~D~v~~~~~ 152 (227)
T 1g8a_A 144 VDVIFEDVA 152 (227)
T ss_dssp EEEEEECCC
T ss_pred ceEEEECCC
Confidence 999998654
No 186
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.15 E-value=8.9e-11 Score=107.27 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=79.2
Q ss_pred HHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 168 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
.+.+.+. ..+..+|||||||+|.++..+++..+..+++++|+ +.|++.|++ ..++.++.+|+.+ ++++
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~ 261 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVPK 261 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCCC
Confidence 3444444 44578999999999999999999988889999999 888887764 3689999999987 6665
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
+ |+|++.+++||+++++ ++| |++++..+.
T Consensus 262 ~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 262 G--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp C--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 4 9999999999998865 333 889998765
No 187
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.15 E-value=1.2e-10 Score=104.29 Aligned_cols=85 Identities=16% Similarity=0.121 Sum_probs=71.4
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
.+...+...++.+|||+|||+|..+..+++.. ...+|+|+|+|+.+++.++++++..+ ..++.++++|+..++..+
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g---~~~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG---VLNVILFHSSSLHIGELN 185 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT---CCSEEEESSCGGGGGGGC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC---CCeEEEEECChhhccccc
Confidence 34455677788999999999999999999874 34699999999999999999998872 347999999998876556
Q ss_pred CccceEEec
Q 023034 247 SSIDAVHAG 255 (288)
Q Consensus 247 ~sfD~V~~~ 255 (288)
++||+|++.
T Consensus 186 ~~fD~Il~d 194 (315)
T 1ixk_A 186 VEFDKILLD 194 (315)
T ss_dssp CCEEEEEEE
T ss_pred ccCCEEEEe
Confidence 789999984
No 188
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.14 E-value=1.4e-10 Score=103.05 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=68.0
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.|++.+++++... + ..++.++.+|+..++++
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~-~--~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYE-G--YNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHT-T--CCCEEC----CCSSCCC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHc-C--CCceEEEECchhhCCcc
Confidence 45666777777789999999999999999998865 9999999999999999998765 1 36899999999988763
Q ss_pred CCccceEEeccc
Q 023034 246 SSSIDAVHAGAA 257 (288)
Q Consensus 246 ~~sfD~V~~~~v 257 (288)
+||+|+++..
T Consensus 106 --~~D~Vv~n~p 115 (299)
T 2h1r_A 106 --KFDVCTANIP 115 (299)
T ss_dssp --CCSEEEEECC
T ss_pred --cCCEEEEcCC
Confidence 8999999543
No 189
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.14 E-value=2.2e-10 Score=106.95 Aligned_cols=85 Identities=16% Similarity=0.266 Sum_probs=71.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC----
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---- 241 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~---- 241 (288)
++.+.+++...++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++++.. + ..++.++++|+.+
T Consensus 275 ~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~--~V~gvD~s~~al~~A~~n~~~~-~--~~~v~f~~~d~~~~l~~ 349 (433)
T 1uwv_A 275 VARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQNARLN-G--LQNVTFYHENLEEDVTK 349 (433)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEECCTTSCCSS
T ss_pred HHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCC--EEEEEeCCHHHHHHHHHHHHHc-C--CCceEEEECCHHHHhhh
Confidence 45556666666788999999999999999998854 9999999999999999998876 2 3489999999987
Q ss_pred CCCCCCccceEEec
Q 023034 242 LPFASSSIDAVHAG 255 (288)
Q Consensus 242 lp~~~~sfD~V~~~ 255 (288)
+++.+++||+|++.
T Consensus 350 ~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 350 QPWAKNGFDKVLLD 363 (433)
T ss_dssp SGGGTTCCSEEEEC
T ss_pred hhhhcCCCCEEEEC
Confidence 44667789999984
No 190
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.14 E-value=6.8e-11 Score=107.10 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=78.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
+.+.+.+...++.+|||||||+|.++..+++..+..+++++|++ .++. +++++.. ....++.++.+|+. .+++
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~--~~~~~v~~~~~d~~-~~~p- 246 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAP--DVAGRWKVVEGDFL-REVP- 246 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCG--GGTTSEEEEECCTT-TCCC-
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--ccccccc--CCCCCeEEEecCCC-CCCC-
Confidence 34555555566889999999999999999999888899999994 4444 3222221 12467999999996 3444
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecC
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLI 277 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~ 277 (288)
+||+|++.+++||+++++ +++ |++++.++.
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 899999999999999883 555 999988764
No 191
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=7e-11 Score=102.04 Aligned_cols=102 Identities=10% Similarity=0.029 Sum_probs=75.7
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCCC--CCcc
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA--SSSI 249 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~~--~~sf 249 (288)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ...++.++.+|+.+ ++.. .++|
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--VDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 334578999999999999999999854 5799999999999999999998762 23579999999875 3322 3589
Q ss_pred ceEEeccccccCCC----ccccc---ceEEEEecC
Q 023034 250 DAVHAGAAIHCWSS----PSTGV---GVFFQVTLI 277 (288)
Q Consensus 250 D~V~~~~vl~h~~d----~~~~l---G~lvi~t~~ 277 (288)
|+|++.......+. ..+.| |.+++....
T Consensus 138 D~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 138 DLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 99998664333211 12222 777776654
No 192
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.14 E-value=8.3e-11 Score=101.34 Aligned_cols=105 Identities=11% Similarity=0.073 Sum_probs=85.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
+..+...+. +..+|||||||+|.++..++...+..+|+++|+++.|++.+++++... ..+..+.+.|...-+ +
T Consensus 123 Y~~i~~~i~--~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~----g~~~~~~v~D~~~~~-p 195 (281)
T 3lcv_B 123 YRELFRHLP--RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL----NVPHRTNVADLLEDR-L 195 (281)
T ss_dssp HHHHGGGSC--CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT----TCCEEEEECCTTTSC-C
T ss_pred HHHHHhccC--CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeeecccC-C
Confidence 344444553 367999999999999999998878889999999999999999999887 356888999987655 4
Q ss_pred CCccceEEeccccccCCCccccc----------ceEEEEecC
Q 023034 246 SSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
.+.||+|+++-+++|+++..+.. |.++++-+.
T Consensus 196 ~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 196 DEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp CSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred CCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 57899999999999997765532 777777655
No 193
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=98.14 Aligned_cols=79 Identities=13% Similarity=0.166 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||||||+|.++..+. .+++|+|+|+. ++.++++|+.++++++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEEe
Confidence 457899999999999988873 38999999985 3457899999999989999999999
Q ss_pred cccccCCCccccc----------ceEEEEecCc
Q 023034 256 AAIHCWSSPSTGV----------GVFFQVTLII 278 (288)
Q Consensus 256 ~vl~h~~d~~~~l----------G~lvi~t~~~ 278 (288)
.++|+ +++..++ |.+++.++..
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 99964 7777666 8888887654
No 194
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.13 E-value=1.6e-10 Score=101.94 Aligned_cols=85 Identities=16% Similarity=0.217 Sum_probs=67.7
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...+ ...++.++++|+.+. ++
T Consensus 112 v~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~--l~~~v~~~~~D~~~~-~~ 187 (284)
T 1nv8_A 112 VELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHG--VSDRFFVRKGEFLEP-FK 187 (284)
T ss_dssp HHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTT--CTTSEEEEESSTTGG-GG
T ss_pred HHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcchhh-cc
Confidence 344444443334679999999999999999998 66799999999999999999988762 123599999999863 22
Q ss_pred CCcc---ceEEec
Q 023034 246 SSSI---DAVHAG 255 (288)
Q Consensus 246 ~~sf---D~V~~~ 255 (288)
++| |+|+++
T Consensus 188 -~~f~~~D~Ivsn 199 (284)
T 1nv8_A 188 -EKFASIEMILSN 199 (284)
T ss_dssp -GGTTTCCEEEEC
T ss_pred -cccCCCCEEEEc
Confidence 579 999997
No 195
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.13 E-value=1.5e-10 Score=105.67 Aligned_cols=98 Identities=18% Similarity=0.172 Sum_probs=79.8
Q ss_pred HHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 168 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
.+...+. ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.|++ ..++.++.+|+.+ |++.
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCCC
Confidence 3444444 45578999999999999999999988889999999 888877764 3689999999987 7765
Q ss_pred CccceEEeccccccCCCcc--ccc----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPS--TGV----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~--~~l----------G~lvi~t~~~ 278 (288)
+ |+|++.+++||+++.+ ++| |++++..+..
T Consensus 260 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 260 G--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred C--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 4 9999999999998764 333 9999987653
No 196
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.13 E-value=1e-10 Score=100.88 Aligned_cols=96 Identities=18% Similarity=0.078 Sum_probs=69.5
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHh--CCCCEEEEEeCCHHHHHHHHHHHHhcC--CCCCCC------------
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQES--NFPKEN------------ 231 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~--~~~~~v~gvD~s~~~l~~A~~~~~~~~--g~~~~~------------ 231 (288)
.+...+...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.|++.|++++.... + ...+
T Consensus 42 ~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 120 (250)
T 1o9g_A 42 RALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAG-LTARELERREQSERFG 120 (250)
T ss_dssp HHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcc-ccccchhhhhhhhhcc
Confidence 3344444345779999999999999999987 444599999999999999998765430 0 0001
Q ss_pred -------------EE-------------EEEecCCCCCC-----CCCccceEEeccccccCCCc
Q 023034 232 -------------FL-------------LVRADISRLPF-----ASSSIDAVHAGAAIHCWSSP 264 (288)
Q Consensus 232 -------------i~-------------~~~~d~~~lp~-----~~~sfD~V~~~~vl~h~~d~ 264 (288)
+. +.++|+.+... ...+||+|+++..+.+..+.
T Consensus 121 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~ 184 (250)
T 1o9g_A 121 KPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHW 184 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSS
T ss_pred cccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccc
Confidence 55 89999887431 34589999998877766543
No 197
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.10 E-value=1.1e-10 Score=98.62 Aligned_cols=109 Identities=11% Similarity=0.031 Sum_probs=77.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P- 243 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p- 243 (288)
..+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ...++.++.+|+.+. +
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 125 (223)
T 3duw_A 48 KFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--LNDRVEVRTGLALDSLQQ 125 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHH
Confidence 3333333334578999999999999999999855 5699999999999999999988762 234699999998653 1
Q ss_pred CC---CCccceEEeccccccCCC----ccccc---ceEEEEecC
Q 023034 244 FA---SSSIDAVHAGAAIHCWSS----PSTGV---GVFFQVTLI 277 (288)
Q Consensus 244 ~~---~~sfD~V~~~~vl~h~~d----~~~~l---G~lvi~t~~ 277 (288)
+. .++||+|++.....+.+. ..+.| |.+++....
T Consensus 126 ~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 126 IENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 11 267999998766443322 12222 777766544
No 198
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.10 E-value=1.1e-10 Score=105.83 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||||||+|.++..+++..+..+++++|+ +.|++.|++ ..++.++.+|+.+ +++ .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEee
Confidence 3468999999999999999999987789999999 999988764 2459999999976 554 39999999
Q ss_pred cccccCCCcc--ccc-------------ceEEEEecC
Q 023034 256 AAIHCWSSPS--TGV-------------GVFFQVTLI 277 (288)
Q Consensus 256 ~vl~h~~d~~--~~l-------------G~lvi~t~~ 277 (288)
+++||++++. .++ |++++..+.
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 9999999876 444 778888764
No 199
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=1.9e-10 Score=101.17 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=71.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHH-----hcCCCC---CCCEEEEEe
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQ-----QESNFP---KENFLLVRA 237 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~-s~~~l~~A~~~~~-----~~~g~~---~~~i~~~~~ 237 (288)
+.+.......++.+|||||||+|.++..+++.+. .+|+|+|+ |+.|++.|++++. .. +.. ..++.+...
T Consensus 69 ~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~-~~v~~~D~s~~~~~~~a~~n~~~N~~~~~-~~~~~~~~~v~~~~~ 146 (281)
T 3bzb_A 69 DTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGA-DQVVATDYPDPEILNSLESNIREHTANSC-SSETVKRASPKVVPY 146 (281)
T ss_dssp HHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTC-SEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEEC
T ss_pred HHHHhcchhcCCCeEEEecccccHHHHHHHHcCC-CEEEEEeCCCHHHHHHHHHHHHHhhhhhc-ccccCCCCCeEEEEe
Confidence 4444444434678999999999999999988763 58999999 8999999999983 32 100 036777766
Q ss_pred cCCCCC--C----CCCccceEEeccccccCCCcccc
Q 023034 238 DISRLP--F----ASSSIDAVHAGAAIHCWSSPSTG 267 (288)
Q Consensus 238 d~~~lp--~----~~~sfD~V~~~~vl~h~~d~~~~ 267 (288)
|..+.. + .+++||+|++..+++|.++...+
T Consensus 147 ~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~l 182 (281)
T 3bzb_A 147 RWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDAL 182 (281)
T ss_dssp CTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHH
T ss_pred cCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHH
Confidence 655421 1 35789999999999987664433
No 200
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.10 E-value=1e-10 Score=98.06 Aligned_cols=78 Identities=17% Similarity=0.122 Sum_probs=64.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CCCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~sfD~V~~ 254 (288)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..+ ...++.++.+|+.+. +..++ ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--LIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--GGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 467999999999999999998854 5799999999999999999987651 134699999998753 54456 999998
Q ss_pred ccc
Q 023034 255 GAA 257 (288)
Q Consensus 255 ~~v 257 (288)
...
T Consensus 133 ~~~ 135 (210)
T 3c3p_A 133 DCD 135 (210)
T ss_dssp ETT
T ss_pred cCC
Confidence 643
No 201
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.09 E-value=1.7e-10 Score=100.97 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=71.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
...+.+.+.+...++ +|||||||+|.++..+++.+. +|+|+|+++.|++.+++++.. .++.++++|+..++
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSG------LPVRLVFQDALLYP 104 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTT------SSEEEEESCGGGSC
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCC------CCEEEEECChhhCC
Confidence 345677777777778 999999999999999999975 999999999999999998542 47999999999988
Q ss_pred CCCC-ccceEEecc
Q 023034 244 FASS-SIDAVHAGA 256 (288)
Q Consensus 244 ~~~~-sfD~V~~~~ 256 (288)
+++. .+|.|+++.
T Consensus 105 ~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 105 WEEVPQGSLLVANL 118 (271)
T ss_dssp GGGSCTTEEEEEEE
T ss_pred hhhccCccEEEecC
Confidence 7653 688888865
No 202
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.09 E-value=9.7e-11 Score=104.08 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=76.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--C
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--F 244 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--~ 244 (288)
+.+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.|+++++.. ..++.++++|+.+++ +
T Consensus 16 ~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 16 REVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----SDRVSLFKVSYREADFLL 91 (301)
T ss_dssp HHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----TTTEEEEECCGGGHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCHHHHHHHH
Confidence 4556677777789999999999999999999865569999999999999999998876 268999999998875 2
Q ss_pred C---CCccceEEeccc--cccCCCcccc
Q 023034 245 A---SSSIDAVHAGAA--IHCWSSPSTG 267 (288)
Q Consensus 245 ~---~~sfD~V~~~~v--l~h~~d~~~~ 267 (288)
. .++||.|++... -.++.++.+.
T Consensus 92 ~~~g~~~~D~Vl~D~gvSs~qld~~~rg 119 (301)
T 1m6y_A 92 KTLGIEKVDGILMDLGVSTYQLKGENRG 119 (301)
T ss_dssp HHTTCSCEEEEEEECSCCHHHHHTSCSC
T ss_pred HhcCCCCCCEEEEcCccchhhhcccccc
Confidence 2 157999998543 2344444443
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.08 E-value=2.2e-10 Score=100.45 Aligned_cols=83 Identities=17% Similarity=0.125 Sum_probs=69.5
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC----
Q 023034 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---- 244 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~---- 244 (288)
...+...++.+|||+|||+|..+..+++...+ .+|+|+|+++.+++.++++++.. | ..++.++.+|+..++.
T Consensus 76 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~-g--~~~v~~~~~D~~~~~~~~~~ 152 (274)
T 3ajd_A 76 PIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM-G--VLNTIIINADMRKYKDYLLK 152 (274)
T ss_dssp HHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEESCHHHHHHHHHH
T ss_pred HHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh-C--CCcEEEEeCChHhcchhhhh
Confidence 44556677899999999999999999986433 69999999999999999999887 2 3489999999987654
Q ss_pred CCCccceEEec
Q 023034 245 ASSSIDAVHAG 255 (288)
Q Consensus 245 ~~~sfD~V~~~ 255 (288)
.+++||+|++.
T Consensus 153 ~~~~fD~Vl~d 163 (274)
T 3ajd_A 153 NEIFFDKILLD 163 (274)
T ss_dssp TTCCEEEEEEE
T ss_pred ccccCCEEEEc
Confidence 26789999986
No 204
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.07 E-value=1.6e-10 Score=98.97 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=78.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P 243 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p 243 (288)
.+.+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ...++.++.+|+.+. +
T Consensus 49 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 49 GQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--LENKIFLKLGSALETLQ 126 (239)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHHHHH
Confidence 34444444444578999999999999999999854 4699999999999999999987762 123599999997642 2
Q ss_pred --------------CCC--CccceEEeccccccCCCcc----ccc---ceEEEEec
Q 023034 244 --------------FAS--SSIDAVHAGAAIHCWSSPS----TGV---GVFFQVTL 276 (288)
Q Consensus 244 --------------~~~--~sfD~V~~~~vl~h~~d~~----~~l---G~lvi~t~ 276 (288)
|++ ++||+|++.....+.+..- +.| |.+++.+.
T Consensus 127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 222 7899999987655443221 122 77777653
No 205
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=8.8e-11 Score=99.30 Aligned_cols=100 Identities=10% Similarity=0.025 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-CCC----Cc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-FAS----SS 248 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p-~~~----~s 248 (288)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..+ ...++.++++|+.+. + +.. ++
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--LSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--CCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 4577999999999999999998754 5799999999999999999988762 234699999998643 2 111 78
Q ss_pred cceEEeccccccCCC----ccccc---ceEEEEecC
Q 023034 249 IDAVHAGAAIHCWSS----PSTGV---GVFFQVTLI 277 (288)
Q Consensus 249 fD~V~~~~vl~h~~d----~~~~l---G~lvi~t~~ 277 (288)
||+|++.....+... ..+.| |.+++....
T Consensus 141 fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 141 YDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 999997654332211 11222 777776554
No 206
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.07 E-value=8.2e-11 Score=106.08 Aligned_cols=86 Identities=15% Similarity=0.111 Sum_probs=67.3
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC-
Q 023034 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF- 244 (288)
Q Consensus 167 ~~l~~~l~-~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~- 244 (288)
+.+.+.+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++++.. +....++.++++|+.++..
T Consensus 142 ~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~-gl~~~~v~~i~~D~~~~l~~ 218 (332)
T 2igt_A 142 EWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLA-GLEQAPIRWICEDAMKFIQR 218 (332)
T ss_dssp HHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHH-TCTTSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECcHHHHHHH
Confidence 33444443 34578999999999999999999876 9999999999999999998876 2222259999999876432
Q ss_pred ---CCCccceEEec
Q 023034 245 ---ASSSIDAVHAG 255 (288)
Q Consensus 245 ---~~~sfD~V~~~ 255 (288)
..++||+|++.
T Consensus 219 ~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 219 EERRGSTYDIILTD 232 (332)
T ss_dssp HHHHTCCBSEEEEC
T ss_pred HHhcCCCceEEEEC
Confidence 15689999994
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.07 E-value=9e-10 Score=100.78 Aligned_cols=80 Identities=20% Similarity=0.188 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCC-CCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF-ASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~-~~~sfD~V~ 253 (288)
.++.+|||+| |+|.++..+++.++..+|+|+|+|+.|++.|+++++.. | ..++.++.+|+.+ +|. .+++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-g--~~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-G--YEDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH-T--CCCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-C--CCCEEEEEChhhhhchhhccCCccEEE
Confidence 3578999999 99999999998877679999999999999999999887 2 2389999999998 764 357899999
Q ss_pred eccccc
Q 023034 254 AGAAIH 259 (288)
Q Consensus 254 ~~~vl~ 259 (288)
++..++
T Consensus 247 ~~~p~~ 252 (373)
T 2qm3_A 247 TDPPET 252 (373)
T ss_dssp ECCCSS
T ss_pred ECCCCc
Confidence 986554
No 208
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.06 E-value=1.2e-09 Score=102.45 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=75.6
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--C
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--F 244 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--~ 244 (288)
.+...+...++.+|||+|||+|..+..+++..++ ++|+++|+++.+++.++++++..+ ..++.++.+|+..++ +
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG---IKIVKPLVKDARKAPEII 326 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCTTCCSSSS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC---CCcEEEEEcChhhcchhh
Confidence 3445567778899999999999999999987544 699999999999999999998772 357999999999876 5
Q ss_pred CCCccceEEe------ccccccCCC
Q 023034 245 ASSSIDAVHA------GAAIHCWSS 263 (288)
Q Consensus 245 ~~~sfD~V~~------~~vl~h~~d 263 (288)
++++||+|++ ..++++.++
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd 351 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPE 351 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTT
T ss_pred ccCCCCEEEEcCCCCCCeeeccChh
Confidence 5578999996 445555544
No 209
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.05 E-value=9.9e-10 Score=99.74 Aligned_cols=104 Identities=11% Similarity=0.115 Sum_probs=84.5
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (288)
.+...+......+|||||||+|.++..++++.|..+++..|. +.+++.|++++... ...++.++.+|+...|++
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~---~~~rv~~~~gD~~~~~~~-- 243 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ---EEEQIDFQEGDFFKDPLP-- 243 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC--
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc---ccCceeeecCccccCCCC--
Confidence 344444445577999999999999999999999889999998 88999999887654 257899999999876654
Q ss_pred ccceEEeccccccCCCccc--cc----------ceEEEEecC
Q 023034 248 SIDAVHAGAAIHCWSSPST--GV----------GVFFQVTLI 277 (288)
Q Consensus 248 sfD~V~~~~vl~h~~d~~~--~l----------G~lvi~t~~ 277 (288)
.+|+|++.++||+++|++. .| |++++....
T Consensus 244 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 244 EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 4799999999999998753 23 889988764
No 210
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.04 E-value=6.3e-11 Score=101.68 Aligned_cols=73 Identities=18% Similarity=0.126 Sum_probs=60.3
Q ss_pred CCCeEEEEcCccchHHHHHHHh----CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC---CCCC-Cc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKS----GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFAS-SS 248 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l---p~~~-~s 248 (288)
++.+|||||||+|..+..+++. ++..+|+|+|+|+.|++.|+. . ..++.++++|+.+. +..+ .+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~----~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D----MENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G----CTTEEEEECCSSCSGGGGGGSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c----CCceEEEECcchhHHHHHhhccCC
Confidence 4679999999999999999987 556799999999999998872 1 36899999999884 5433 47
Q ss_pred cceEEeccc
Q 023034 249 IDAVHAGAA 257 (288)
Q Consensus 249 fD~V~~~~v 257 (288)
||+|++...
T Consensus 153 fD~I~~d~~ 161 (236)
T 2bm8_A 153 HPLIFIDNA 161 (236)
T ss_dssp SSEEEEESS
T ss_pred CCEEEECCc
Confidence 999998665
No 211
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.04 E-value=7.4e-10 Score=103.20 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=76.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--C
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--F 244 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--~ 244 (288)
..+...+...++.+|||+|||+|..+..+++..++++|+++|+++.+++.++++++.. ..++.++.+|+..++ +
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~----g~~~~~~~~D~~~~~~~~ 311 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL----GMKATVKQGDGRYPSQWC 311 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT----TCCCEEEECCTTCTHHHH
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc----CCCeEEEeCchhhchhhc
Confidence 3445566777889999999999999999999876679999999999999999999887 235789999999876 5
Q ss_pred CCCccceEEe------ccccccCCC
Q 023034 245 ASSSIDAVHA------GAAIHCWSS 263 (288)
Q Consensus 245 ~~~sfD~V~~------~~vl~h~~d 263 (288)
++++||+|++ ..++.+.++
T Consensus 312 ~~~~fD~Vl~D~Pcsg~g~~~~~p~ 336 (429)
T 1sqg_A 312 GEQQFDRILLDAPCSATGVIRRHPD 336 (429)
T ss_dssp TTCCEEEEEEECCCCCGGGTTTCTT
T ss_pred ccCCCCEEEEeCCCCcccccCCCcc
Confidence 6688999996 345555544
No 212
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.04 E-value=2.7e-10 Score=101.46 Aligned_cols=87 Identities=11% Similarity=0.047 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCCCCC--CCCccceE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPF--ASSSIDAV 252 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~lp~--~~~sfD~V 252 (288)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+....++.++.+|+...+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3468999999999999999998755569999999999999999987421 01124689999999987653 46899999
Q ss_pred EeccccccCC
Q 023034 253 HAGAAIHCWS 262 (288)
Q Consensus 253 ~~~~vl~h~~ 262 (288)
++.....+.+
T Consensus 174 i~d~~~~~~~ 183 (304)
T 3bwc_A 174 IIDTTDPAGP 183 (304)
T ss_dssp EEECC-----
T ss_pred EECCCCcccc
Confidence 9976665543
No 213
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.02 E-value=4.2e-11 Score=103.19 Aligned_cols=90 Identities=10% Similarity=0.066 Sum_probs=69.7
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFA 245 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~~ 245 (288)
.+...+...++.+|||||||+|..+..+++..+ .++|+++|+++.+++.|+++++..+ ...++.++.+|+.+. +..
T Consensus 51 ~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~~ 128 (242)
T 3r3h_A 51 FMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPALDTLHSL 128 (242)
T ss_dssp HHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHH
Confidence 333333334477999999999999999998753 5799999999999999999998762 235899999998764 211
Q ss_pred -----CCccceEEeccccc
Q 023034 246 -----SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 -----~~sfD~V~~~~vl~ 259 (288)
+++||+|++.....
T Consensus 129 ~~~~~~~~fD~V~~d~~~~ 147 (242)
T 3r3h_A 129 LNEGGEHQFDFIFIDADKT 147 (242)
T ss_dssp HHHHCSSCEEEEEEESCGG
T ss_pred hhccCCCCEeEEEEcCChH
Confidence 47899999876533
No 214
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.02 E-value=1e-09 Score=90.49 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCC---------CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEE-EecCCCCC-
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGLF---------SLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP- 243 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~~---------~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~-~~d~~~lp- 243 (288)
..++.+|||+|||+|.++..+++..+. .+|+|+|+|+.+ ...++.++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCeEEEeccCCCHHH
Confidence 345889999999999999999998432 699999999831 02467888 88887653
Q ss_pred -------CCCCccceEEecccccc----CCCc-------cccc----------ceEEEEecCcccHHHHHh
Q 023034 244 -------FASSSIDAVHAGAAIHC----WSSP-------STGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 244 -------~~~~sfD~V~~~~vl~h----~~d~-------~~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+++++||+|++...++. ..+. ..++ |.|++.++......++.+
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 156 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQR 156 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHH
Confidence 34568999999665443 2222 1222 999999888777666654
No 215
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.02 E-value=1.2e-09 Score=97.34 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=64.0
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEEecc
Q 023034 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAGA 256 (288)
Q Consensus 179 ~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~~~~ 256 (288)
.+|||||||+|.++..+++..+..+++++|+++.|++.|++++... ...++.++.+|+.+. .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP---RAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc---CCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 4899999999999999999766679999999999999999987543 146899999998754 34568999999864
Q ss_pred c
Q 023034 257 A 257 (288)
Q Consensus 257 v 257 (288)
.
T Consensus 168 ~ 168 (317)
T 3gjy_A 168 F 168 (317)
T ss_dssp S
T ss_pred C
Confidence 3
No 216
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.00 E-value=2.1e-10 Score=99.02 Aligned_cols=80 Identities=10% Similarity=0.059 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-C-----CCC
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F-----ASS 247 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p-~-----~~~ 247 (288)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++.. | ...++.++.+|+.+. + + .++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g-~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA-G-VDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT-T-CGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-C-CCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 3467999999999999999999854 579999999999999999998876 2 235799999998753 3 2 257
Q ss_pred ccceEEeccc
Q 023034 248 SIDAVHAGAA 257 (288)
Q Consensus 248 sfD~V~~~~v 257 (288)
+||+|++...
T Consensus 156 ~fD~V~~d~~ 165 (247)
T 1sui_A 156 SYDFIFVDAD 165 (247)
T ss_dssp CBSEEEECSC
T ss_pred CEEEEEEcCc
Confidence 8999998654
No 217
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.00 E-value=1.5e-09 Score=98.19 Aligned_cols=100 Identities=10% Similarity=0.097 Sum_probs=76.4
Q ss_pred CCCCcHHHHHHHHhh---c-CCCCCCeEEEEcCccchHHHHHHHhCCC-----CEEEEEeCCHHHHHHHHHHHHhcCCCC
Q 023034 158 GFPGPEKEFELMKGY---L-KPVLGGNIIDASCGSGLFSRIFAKSGLF-----SLVVALDYSENMLKQCYEFVQQESNFP 228 (288)
Q Consensus 158 g~~~~~~~~~~l~~~---l-~~~~~~~VLDiGcG~G~~~~~l~~~~~~-----~~v~gvD~s~~~l~~A~~~~~~~~g~~ 228 (288)
.+++|......+... + ...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++... |
T Consensus 107 ~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-g-- 183 (344)
T 2f8l_A 107 HQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-R-- 183 (344)
T ss_dssp GCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-T--
T ss_pred cCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-C--
Confidence 366777654443333 2 4446789999999999999998877532 58999999999999999998876 2
Q ss_pred CCCEEEEEecCCCCCCCCCccceEEeccccccCC
Q 023034 229 KENFLLVRADISRLPFASSSIDAVHAGAAIHCWS 262 (288)
Q Consensus 229 ~~~i~~~~~d~~~lp~~~~sfD~V~~~~vl~h~~ 262 (288)
.++.++++|+.... ..+.||+|+++-.+.+++
T Consensus 184 -~~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~ 215 (344)
T 2f8l_A 184 -QKMTLLHQDGLANL-LVDPVDVVISDLPVGYYP 215 (344)
T ss_dssp -CCCEEEESCTTSCC-CCCCEEEEEEECCCSEES
T ss_pred -CCceEEECCCCCcc-ccCCccEEEECCCCCCcC
Confidence 36889999987633 457899999998776654
No 218
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.99 E-value=1e-09 Score=97.26 Aligned_cols=82 Identities=12% Similarity=0.246 Sum_probs=64.7
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-C-CCCCCEEEEEecCCCC-CCCCCccceEE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-N-FPKENFLLVRADISRL-PFASSSIDAVH 253 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g-~~~~~i~~~~~d~~~l-p~~~~sfD~V~ 253 (288)
.+.+|||||||+|.++..+++..+..+|+++|+++.|++.|++++.... + ....++.++.+|+.+. +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999999988655799999999999999999976531 0 1246899999998764 44568999999
Q ss_pred ecccc
Q 023034 254 AGAAI 258 (288)
Q Consensus 254 ~~~vl 258 (288)
+...-
T Consensus 163 ~D~~~ 167 (294)
T 3adn_A 163 SDCTD 167 (294)
T ss_dssp ECC--
T ss_pred ECCCC
Confidence 95543
No 219
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.99 E-value=6.8e-10 Score=97.92 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=65.9
Q ss_pred HHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEE-EecCCCCC---
Q 023034 169 MKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP--- 243 (288)
Q Consensus 169 l~~~l~~-~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~-~~d~~~lp--- 243 (288)
+++.+.. .++.+|||||||||.++..+++.+. .+|+|+|+|++|++.+.++ ..++... ..++..++
T Consensus 76 ~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga-~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~~ 146 (291)
T 3hp7_A 76 ALAVFNLSVEDMITIDIGASTGGFTDVMLQNGA-KLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPVD 146 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGGG
T ss_pred HHHhcCCCccccEEEecCCCccHHHHHHHhCCC-CEEEEEECCHHHHHHHHHh--------CcccceecccCceecchhh
Confidence 3344433 3577999999999999999988864 5999999999999986543 2343322 23444333
Q ss_pred CCCCccceEEeccccccCCCccccc-------ceEEEE
Q 023034 244 FASSSIDAVHAGAAIHCWSSPSTGV-------GVFFQV 274 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h~~d~~~~l-------G~lvi~ 274 (288)
++..+||+|++..+++++......+ |.+++.
T Consensus 147 l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 147 FTEGLPSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CTTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 3345699999988887653222211 888776
No 220
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.99 E-value=5.9e-10 Score=101.25 Aligned_cols=88 Identities=17% Similarity=0.234 Sum_probs=74.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
+..+|||||||+|.++..+++.++..+++++|+ +.+++.|++ ..++.++.+|+.+ +++ .||+|++.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEcc
Confidence 467999999999999999999988789999999 788877654 2469999999987 665 499999999
Q ss_pred ccccCCCcc--ccc-------------ceEEEEecC
Q 023034 257 AIHCWSSPS--TGV-------------GVFFQVTLI 277 (288)
Q Consensus 257 vl~h~~d~~--~~l-------------G~lvi~t~~ 277 (288)
++||++++. +++ |++++..+.
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 999999876 444 678887764
No 221
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.98 E-value=4.6e-10 Score=95.86 Aligned_cols=81 Identities=14% Similarity=0.056 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC----CCCCC--Cc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LPFAS--SS 248 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~----lp~~~--~s 248 (288)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... | ...++.++.+|+.+ ++..+ ++
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g-~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA-G-VAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-T-CGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-C-CCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3467999999999999999998754 569999999999999999998776 2 13469999999753 33333 78
Q ss_pred cceEEecccc
Q 023034 249 IDAVHAGAAI 258 (288)
Q Consensus 249 fD~V~~~~vl 258 (288)
||+|++....
T Consensus 149 fD~V~~d~~~ 158 (232)
T 3cbg_A 149 FDLIFIDADK 158 (232)
T ss_dssp EEEEEECSCG
T ss_pred cCEEEECCCH
Confidence 9999987653
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.98 E-value=1.6e-10 Score=101.48 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEE--EecCCCCCCCCCccceE
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPFASSSIDAV 252 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~--~~d~~~lp~~~~sfD~V 252 (288)
..++.+|||+|||+|.++..+++. . +|+|+|+++ |+..++++.... .....++.++ ++|+..+| +++||+|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~--~V~gVD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P--NVREVKAYT-LGTSGHEKPRLV-ETFGWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T--TEEEEEEEC-CCCTTSCCCCCC-CCTTGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C--CEEEEECch-hhhhhhhchhhh-hhcCCCeEEEeccCcHhhCC--CCCcCEE
Confidence 456889999999999999999988 3 899999999 654433210000 0001268888 89998876 6899999
Q ss_pred EeccccccCCCcc-------ccc----------c--eEEEEecCcccH
Q 023034 253 HAGAAIHCWSSPS-------TGV----------G--VFFQVTLIIHVV 281 (288)
Q Consensus 253 ~~~~vl~h~~d~~-------~~l----------G--~lvi~t~~~~~l 281 (288)
++..+ ++..++. .++ | .|++.++.+...
T Consensus 153 vsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~ 199 (276)
T 2wa2_A 153 LCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSC 199 (276)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSH
T ss_pred EECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCch
Confidence 99877 4433321 123 8 899988876543
No 223
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.98 E-value=4.7e-10 Score=102.59 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=74.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCc------cchHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEE
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCG------SGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 235 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG------~G~~~~~l~~-~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~ 235 (288)
...++.+...+.. ++.+||||||| +|..+..+.+ ..+.++|+|+|+|+.|. .. ..++.++
T Consensus 203 ~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~----~~rI~fv 269 (419)
T 3sso_A 203 TPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD----ELRIRTI 269 (419)
T ss_dssp HHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC----BTTEEEE
T ss_pred HHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc----CCCcEEE
Confidence 3445666655543 46899999999 6655555554 45678999999999983 11 4689999
Q ss_pred EecCCCCCCC------CCccceEEeccccccCCCccccc----------ceEEEEecC
Q 023034 236 RADISRLPFA------SSSIDAVHAGAAIHCWSSPSTGV----------GVFFQVTLI 277 (288)
Q Consensus 236 ~~d~~~lp~~------~~sfD~V~~~~vl~h~~d~~~~l----------G~lvi~t~~ 277 (288)
++|+.++++. +++||+|++.. .+++.++..++ |.|++.+..
T Consensus 270 ~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 270 QGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp ECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999999887 78999999865 46666665555 888887765
No 224
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.97 E-value=2.1e-10 Score=100.21 Aligned_cols=104 Identities=20% Similarity=0.141 Sum_probs=70.7
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEE--EecCCCCCCCC
Q 023034 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPFAS 246 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~--~~d~~~lp~~~ 246 (288)
+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++.... .....++.++ ++|+..++ +
T Consensus 66 i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~--~ 138 (265)
T 2oxt_A 66 MEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRIT-ESYGWNIVKFKSRVDIHTLP--V 138 (265)
T ss_dssp HHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCC-CBTTGGGEEEECSCCTTTSC--C
T ss_pred HHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhh-hccCCCeEEEecccCHhHCC--C
Confidence 333333456889999999999999999987 3899999999 643332210000 0001168888 89999876 6
Q ss_pred CccceEEeccccccCCCcc-------ccc----------c--eEEEEecCccc
Q 023034 247 SSIDAVHAGAAIHCWSSPS-------TGV----------G--VFFQVTLIIHV 280 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~-------~~l----------G--~lvi~t~~~~~ 280 (288)
++||+|++..+ ++..++. .++ | .|++.++.+..
T Consensus 139 ~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~ 190 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS 190 (265)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS
T ss_pred CCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC
Confidence 89999999877 5443321 123 8 89998887544
No 225
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.97 E-value=3e-09 Score=93.32 Aligned_cols=84 Identities=19% Similarity=0.150 Sum_probs=70.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (288)
..+.+.+. +|.+|||+|||+|.++..+++.+. .+|+++|+++.+++.++++++.+ ....++.++.+|+.+++. .
T Consensus 117 ~ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N--~v~~~v~~~~~D~~~~~~-~ 190 (278)
T 3k6r_A 117 VRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPG-E 190 (278)
T ss_dssp HHHHHHCC--TTCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCC-C
T ss_pred HHHHHhcC--CCCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEeCcHHHhcc-c
Confidence 44555554 489999999999999999998874 58999999999999999999886 235679999999998763 5
Q ss_pred CccceEEecc
Q 023034 247 SSIDAVHAGA 256 (288)
Q Consensus 247 ~sfD~V~~~~ 256 (288)
+.||.|+++.
T Consensus 191 ~~~D~Vi~~~ 200 (278)
T 3k6r_A 191 NIADRILMGY 200 (278)
T ss_dssp SCEEEEEECC
T ss_pred cCCCEEEECC
Confidence 7899999864
No 226
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.96 E-value=1.6e-09 Score=95.26 Aligned_cols=74 Identities=15% Similarity=0.208 Sum_probs=62.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~--~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+++.|++.++++. . .++.++++|+.+++
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~-----~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G-----ELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G-----GGEEEEESCGGGCC
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C-----CCcEEEECChhcCC
Confidence 466777777778899999999999999999998761 23999999999999999983 2 47999999999988
Q ss_pred CCC
Q 023034 244 FAS 246 (288)
Q Consensus 244 ~~~ 246 (288)
+++
T Consensus 104 ~~~ 106 (279)
T 3uzu_A 104 FGS 106 (279)
T ss_dssp GGG
T ss_pred hhH
Confidence 754
No 227
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.95 E-value=3.9e-09 Score=95.10 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCCC--CCCCCccceE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRL--PFASSSIDAV 252 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~l--p~~~~sfD~V 252 (288)
..+.+|||||||+|.++..+++..+..+|+++|+|+.|++.|++++... .+....++.++.+|+.+. .+++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3467999999999999999998765579999999999999999987641 011146899999998753 2346789999
Q ss_pred Eeccc
Q 023034 253 HAGAA 257 (288)
Q Consensus 253 ~~~~v 257 (288)
++...
T Consensus 199 i~d~~ 203 (334)
T 1xj5_A 199 IVDSS 203 (334)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98543
No 228
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.95 E-value=5.2e-10 Score=94.78 Aligned_cols=89 Identities=11% Similarity=0.044 Sum_probs=68.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P- 243 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p- 243 (288)
+.+.......++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++.. | ...++.++.+|+.+. +
T Consensus 59 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-g-~~~~i~~~~~d~~~~~~~ 136 (229)
T 2avd_A 59 QLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA-E-AEHKIDLRLKPALETLDE 136 (229)
T ss_dssp HHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-T-CTTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-C-CCCeEEEEEcCHHHHHHH
Confidence 3333333334578999999999999999998754 569999999999999999998876 2 236899999998643 1
Q ss_pred CCC----CccceEEeccc
Q 023034 244 FAS----SSIDAVHAGAA 257 (288)
Q Consensus 244 ~~~----~sfD~V~~~~v 257 (288)
+.+ ++||+|++...
T Consensus 137 ~~~~~~~~~~D~v~~d~~ 154 (229)
T 2avd_A 137 LLAAGEAGTFDVAVVDAD 154 (229)
T ss_dssp HHHTTCTTCEEEEEECSC
T ss_pred HHhcCCCCCccEEEECCC
Confidence 211 68999999654
No 229
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.95 E-value=1.3e-09 Score=97.40 Aligned_cols=84 Identities=15% Similarity=0.114 Sum_probs=67.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CC-CCCCCEEEEEecCCC-CCCCCCccceEE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SN-FPKENFLLVRADISR-LPFASSSIDAVH 253 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g-~~~~~i~~~~~d~~~-lp~~~~sfD~V~ 253 (288)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+ ....++.++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 467999999999999999998755569999999999999999987641 01 114689999999876 344568899999
Q ss_pred ecccccc
Q 023034 254 AGAAIHC 260 (288)
Q Consensus 254 ~~~vl~h 260 (288)
+....++
T Consensus 157 ~d~~~~~ 163 (314)
T 1uir_A 157 IDLTDPV 163 (314)
T ss_dssp EECCCCB
T ss_pred ECCCCcc
Confidence 9765543
No 230
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.95 E-value=5.9e-11 Score=102.30 Aligned_cols=82 Identities=13% Similarity=0.238 Sum_probs=68.1
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++.. ..++.++++|+.+++++
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQFP 90 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTCC
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCcc
Confidence 35667777777788999999999999999999874 999999999999999876542 35799999999999877
Q ss_pred C-CccceEEec
Q 023034 246 S-SSIDAVHAG 255 (288)
Q Consensus 246 ~-~sfD~V~~~ 255 (288)
+ ++| .|+++
T Consensus 91 ~~~~f-~vv~n 100 (245)
T 1yub_A 91 NKQRY-KIVGN 100 (245)
T ss_dssp CSSEE-EEEEE
T ss_pred cCCCc-EEEEe
Confidence 4 688 56654
No 231
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.94 E-value=1.5e-09 Score=96.56 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCC-CCCCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~-lp~~~~sfD~V~ 253 (288)
..+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+....++.++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 3468999999999999999998865579999999999999999987641 01114689999999865 344568899999
Q ss_pred eccc
Q 023034 254 AGAA 257 (288)
Q Consensus 254 ~~~v 257 (288)
+...
T Consensus 174 ~d~~ 177 (304)
T 2o07_A 174 TDSS 177 (304)
T ss_dssp EECC
T ss_pred ECCC
Confidence 8654
No 232
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.94 E-value=2.9e-09 Score=93.38 Aligned_cols=82 Identities=10% Similarity=0.080 Sum_probs=65.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCCCCEEEEEecCCC-CCCCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR-LPFASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g~~~~~i~~~~~d~~~-lp~~~~sfD~V~~ 254 (288)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++.... +....++.++.+|+.+ ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4679999999999999999987444699999999999999999875420 1224689999999875 3444678999999
Q ss_pred cccc
Q 023034 255 GAAI 258 (288)
Q Consensus 255 ~~vl 258 (288)
....
T Consensus 155 d~~~ 158 (275)
T 1iy9_A 155 DSTE 158 (275)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 6543
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.93 E-value=1.7e-09 Score=99.73 Aligned_cols=77 Identities=19% Similarity=0.206 Sum_probs=63.4
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC----CCCccceE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~sfD~V 252 (288)
++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|+++++.. |....++.++++|+.+... ...+||+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~-~~V~~vD~s~~al~~a~~n~~~n-gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGC-SQVVSVDTSQEALDIARQNVELN-KLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 578999999999999999999863 59999999999999999999876 2101279999999876521 14689999
Q ss_pred Eec
Q 023034 253 HAG 255 (288)
Q Consensus 253 ~~~ 255 (288)
++.
T Consensus 298 i~d 300 (396)
T 3c0k_A 298 VMD 300 (396)
T ss_dssp EEC
T ss_pred EEC
Confidence 996
No 234
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.93 E-value=1.1e-10 Score=99.93 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=41.6
Q ss_pred HHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 169 MKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 169 l~~~l~~-~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+++.+.. ..+.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|+++
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHT
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHh
Confidence 3344433 3467999999999999999999864 4999999999999998775
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.93 E-value=1.6e-09 Score=106.85 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=65.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CCCCCCccceEEec
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASSSIDAVHAG 255 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp~~~~sfD~V~~~ 255 (288)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+++++.. |....++.++++|+.+ ++...++||+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~n-gl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHT-TCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHc-CCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 478999999999999999998765 57999999999999999999887 3323579999999876 44456789999984
Q ss_pred c
Q 023034 256 A 256 (288)
Q Consensus 256 ~ 256 (288)
-
T Consensus 617 P 617 (703)
T 3v97_A 617 P 617 (703)
T ss_dssp C
T ss_pred C
Confidence 3
No 236
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.93 E-value=4.2e-10 Score=91.55 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=68.3
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---CCCcc
Q 023034 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSI 249 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~sf 249 (288)
++.++|.+|||||||. +++|+|+.|++.|+++.. .++.+.++|+.++++ ++++|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCE
Confidence 3556799999999996 238999999999998742 248899999999887 78999
Q ss_pred ceEEeccccccC-CCccccc----------ceEEEEec
Q 023034 250 DAVHAGAAIHCW-SSPSTGV----------GVFFQVTL 276 (288)
Q Consensus 250 D~V~~~~vl~h~-~d~~~~l----------G~lvi~t~ 276 (288)
|+|++..+++|+ +++..++ |.|++..+
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 999999999999 8887777 88888654
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.92 E-value=3.3e-09 Score=87.99 Aligned_cols=95 Identities=14% Similarity=0.204 Sum_probs=68.4
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC---------
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA--------- 245 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~--------- 245 (288)
..++.+|||+|||+|.++..+++.+ .+|+|+|+++.. ...++.++++|+.+.+..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~--------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME--------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC--------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc--------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 3568999999999999999999884 599999999831 145799999999886521
Q ss_pred --CCccceEEeccccccCC----Cc-------cc-------cc---ceEEEEecCcccHHHHH
Q 023034 246 --SSSIDAVHAGAAIHCWS----SP-------ST-------GV---GVFFQVTLIIHVVEDLA 285 (288)
Q Consensus 246 --~~sfD~V~~~~vl~h~~----d~-------~~-------~l---G~lvi~t~~~~~l~el~ 285 (288)
.++||+|++........ |. .. .| |.|++..+......++.
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~ 149 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFI 149 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHH
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHH
Confidence 14899999965322111 11 11 22 99999998776665554
No 238
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.92 E-value=9.6e-10 Score=94.23 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C-C-----CCC
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F-----ASS 247 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p-~-----~~~ 247 (288)
.++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++.. | ...++.++.+|+.+. + + +++
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g-~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA-G-VEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-T-CGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-C-CCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 4467999999999999999998854 579999999999999999998876 2 234799999998753 2 2 257
Q ss_pred ccceEEeccc
Q 023034 248 SIDAVHAGAA 257 (288)
Q Consensus 248 sfD~V~~~~v 257 (288)
+||+|++...
T Consensus 147 ~fD~I~~d~~ 156 (237)
T 3c3y_A 147 SYDFGFVDAD 156 (237)
T ss_dssp CEEEEEECSC
T ss_pred CcCEEEECCc
Confidence 8999998654
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.92 E-value=5.7e-09 Score=98.45 Aligned_cols=82 Identities=13% Similarity=0.059 Sum_probs=68.8
Q ss_pred HhhcCCC--CCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC-C
Q 023034 170 KGYLKPV--LGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-A 245 (288)
Q Consensus 170 ~~~l~~~--~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~-~ 245 (288)
...+... ++.+|||+|||+|..+..+++.. ..+.|+++|+|+.+++.++++++..+ ..++.++++|+..++. .
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g---~~nv~~~~~D~~~~~~~~ 184 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTHFDGRVFGAAV 184 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCCSTTHHHHS
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCCHHHhhhhc
Confidence 3445555 78999999999999999999874 34699999999999999999998872 3579999999998764 4
Q ss_pred CCccceEEe
Q 023034 246 SSSIDAVHA 254 (288)
Q Consensus 246 ~~sfD~V~~ 254 (288)
+++||+|++
T Consensus 185 ~~~fD~Il~ 193 (479)
T 2frx_A 185 PEMFDAILL 193 (479)
T ss_dssp TTCEEEEEE
T ss_pred cccCCEEEE
Confidence 678999998
No 240
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.92 E-value=1.8e-09 Score=95.69 Aligned_cols=80 Identities=11% Similarity=0.111 Sum_probs=63.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCC-CCCCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~-lp~~~~sfD~V~~ 254 (288)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+....++.++.+|+.. ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 357999999999999999998755579999999999999999987541 01114689999999865 3444678999998
Q ss_pred cc
Q 023034 255 GA 256 (288)
Q Consensus 255 ~~ 256 (288)
..
T Consensus 170 d~ 171 (296)
T 1inl_A 170 DS 171 (296)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.90 E-value=3.6e-09 Score=95.43 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=71.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEecc
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~ 256 (288)
++.+|||+|||+|.++.. ++. ..+|+|+|+|+.+++.|+++++.. + ...++.++++|+.+.. ++||+|++.-
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n-~-l~~~v~~~~~D~~~~~---~~fD~Vi~dp 266 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLN-K-LEHKIIPILSDVREVD---VKGNRVIMNL 266 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHT-T-CTTTEEEEESCGGGCC---CCEEEEEECC
T ss_pred CCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHc-C-CCCcEEEEECChHHhc---CCCcEEEECC
Confidence 488999999999999999 773 359999999999999999999886 2 2257999999998775 7899999852
Q ss_pred ccc---cCCCccccc---ceEEEEecCcc
Q 023034 257 AIH---CWSSPSTGV---GVFFQVTLIIH 279 (288)
Q Consensus 257 vl~---h~~d~~~~l---G~lvi~t~~~~ 279 (288)
.-. .+....+.+ |.+++.++...
T Consensus 267 P~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 267 PKFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TTTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred cHhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 211 111111122 78888777654
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.90 E-value=1.8e-09 Score=101.23 Aligned_cols=83 Identities=16% Similarity=0.115 Sum_probs=68.7
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~ 245 (288)
.+...+...++.+|||+|||+|..+..+++... .+.|+++|+|+.+++.++++++.. | .. +.++++|+..++ +.
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~-G--~~-v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW-G--AP-LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH-C--CC-CEEECSCHHHHHHHH
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-C--Ce-EEEEECCHHHhhhhc
Confidence 344556677899999999999999999998743 369999999999999999999887 2 23 889999988765 34
Q ss_pred CCccceEEe
Q 023034 246 SSSIDAVHA 254 (288)
Q Consensus 246 ~~sfD~V~~ 254 (288)
+++||+|++
T Consensus 168 ~~~FD~Il~ 176 (464)
T 3m6w_A 168 GTYFHRVLL 176 (464)
T ss_dssp CSCEEEEEE
T ss_pred cccCCEEEE
Confidence 678999996
No 243
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.90 E-value=1.3e-08 Score=94.51 Aligned_cols=73 Identities=25% Similarity=0.287 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++++.. + .. +.++.+|+.++... +||+|++.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~n-g--l~-v~~~~~d~~~~~~~--~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEIN-N--VD-AEFEVASDREVSVK--GFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T--CC-EEEEECCTTTCCCT--TCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-C--Cc-EEEEECChHHcCcc--CCCEEEEc
Confidence 4578999999999999999998865 9999999999999999998876 2 23 99999999987532 89999985
Q ss_pred c
Q 023034 256 A 256 (288)
Q Consensus 256 ~ 256 (288)
-
T Consensus 361 P 361 (425)
T 2jjq_A 361 P 361 (425)
T ss_dssp C
T ss_pred C
Confidence 4
No 244
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.89 E-value=2.6e-09 Score=92.41 Aligned_cols=73 Identities=15% Similarity=0.382 Sum_probs=62.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++.|++.++++ . ..++.++++|+..++++
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~---~----~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI---G----DERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS---C----CTTEEEECSCTTTCCGG
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc---c----CCCeEEEEcchhhCChh
Confidence 4667777777778999999999999999999885 24999999999999999876 1 35899999999999876
Q ss_pred C
Q 023034 246 S 246 (288)
Q Consensus 246 ~ 246 (288)
+
T Consensus 92 ~ 92 (249)
T 3ftd_A 92 S 92 (249)
T ss_dssp G
T ss_pred H
Confidence 4
No 245
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.88 E-value=4.2e-09 Score=96.72 Aligned_cols=78 Identities=14% Similarity=0.174 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CC---CCCccce
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF---ASSSIDA 251 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~---~~~sfD~ 251 (288)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|+++++.. |....++.++++|+.+. +. ...+||+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n-~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEAN-HLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHT-TCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 3578999999999999999998753 48999999999999999999886 22112899999998753 21 2458999
Q ss_pred EEec
Q 023034 252 VHAG 255 (288)
Q Consensus 252 V~~~ 255 (288)
|++.
T Consensus 289 Ii~D 292 (385)
T 2b78_A 289 IIID 292 (385)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.88 E-value=2.4e-09 Score=98.70 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC----CCCccceE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~sfD~V 252 (288)
++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++... + ...++.++++|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~-~~v~~vD~s~~~l~~a~~n~~~n-~-~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGA-DEVIGIDKSPRAIETAKENAKLN-G-VEDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHT-T-CGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHc-C-CCccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 578999999999999999998853 59999999999999999999876 2 12279999999876532 25789999
Q ss_pred Eec
Q 023034 253 HAG 255 (288)
Q Consensus 253 ~~~ 255 (288)
++.
T Consensus 294 i~d 296 (396)
T 2as0_A 294 VLD 296 (396)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 247
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.88 E-value=3e-09 Score=95.35 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=64.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCCCCEEEEEecCCC-CCCCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR-LPFASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g~~~~~i~~~~~d~~~-lp~~~~sfD~V~~ 254 (288)
.+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++.... +....+++++.+|+.+ ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4679999999999999999987555799999999999999999876510 1114689999999865 3334578999998
Q ss_pred cc
Q 023034 255 GA 256 (288)
Q Consensus 255 ~~ 256 (288)
..
T Consensus 196 d~ 197 (321)
T 2pt6_A 196 DS 197 (321)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 248
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.87 E-value=1.2e-09 Score=94.75 Aligned_cols=84 Identities=7% Similarity=0.131 Sum_probs=64.2
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (288)
.+.+.+.+...++.+|||||||+|.++. +. .+...+|+|+|+++.|++.+++++... .++.++++|+..++++
T Consensus 10 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 10 IDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGGGCCHH
T ss_pred HHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchhhCCHH
Confidence 4566667777778899999999999999 65 455123999999999999999875432 4799999999988764
Q ss_pred CC-----ccceEEecc
Q 023034 246 SS-----SIDAVHAGA 256 (288)
Q Consensus 246 ~~-----sfD~V~~~~ 256 (288)
+. ..|.|+++.
T Consensus 83 ~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 83 ELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHTSCEEEEEEC
T ss_pred HhhcccCCceEEEECC
Confidence 32 245676654
No 249
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.87 E-value=1.4e-09 Score=99.71 Aligned_cols=74 Identities=23% Similarity=0.167 Sum_probs=62.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC----CCCccceE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~sfD~V 252 (288)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++++.. | ..++.++++|+.+... ..++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n-~--~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLN-G--LGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHT-T--CTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc-C--CCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 57899999999999999999884 49999999999999999999887 2 3459999999876532 25789999
Q ss_pred Eec
Q 023034 253 HAG 255 (288)
Q Consensus 253 ~~~ 255 (288)
++.
T Consensus 284 i~d 286 (382)
T 1wxx_A 284 VLD 286 (382)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 250
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.86 E-value=5.4e-09 Score=96.23 Aligned_cols=74 Identities=14% Similarity=0.050 Sum_probs=59.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CCCCCccceEEec
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAG 255 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~sfD~V~~~ 255 (288)
++.+|||+|||+|.++..+++.+. .|+++|+|+.|++.|+++++.. | ....+.++|+.+. +...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~n-g---~~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRL-G---LRVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T---CCCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHh-C---CCCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 488999999999999999999876 6999999999999999999887 2 2235668888754 2213449999985
Q ss_pred c
Q 023034 256 A 256 (288)
Q Consensus 256 ~ 256 (288)
-
T Consensus 288 p 288 (393)
T 4dmg_A 288 P 288 (393)
T ss_dssp C
T ss_pred C
Confidence 3
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.86 E-value=1.6e-08 Score=94.67 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=89.1
Q ss_pred cchhhhhHHHHhhhhh-----cCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-------------CC
Q 023034 140 PFMSFIYERGWRQNFV-----WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-------------LF 201 (288)
Q Consensus 140 ~~~s~~~~~~wr~~~~-----~~g~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-------------~~ 201 (288)
..+...|+....+... .+.++.|....+.+.+.+.+.++.+|||.|||+|.++..+.+.. ..
T Consensus 129 d~~G~~yE~ll~~~~~~~~~~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~ 208 (445)
T 2okc_A 129 DVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRD 208 (445)
T ss_dssp HHHHHHHHHHHHHHHTCTTTCCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccccCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcC
Confidence 3445556654443221 12378888888889988888788899999999999998887642 12
Q ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEeccccccC
Q 023034 202 SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCW 261 (288)
Q Consensus 202 ~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~vl~h~ 261 (288)
..++|+|+++.+++.|+.++... |....++.+.++|....+.. .+||+|+++-.+.+.
T Consensus 209 ~~i~G~Ei~~~~~~lA~~nl~l~-g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~ 266 (445)
T 2okc_A 209 KALHGVDNTPLVVTLASMNLYLH-GIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTR 266 (445)
T ss_dssp TTEEEEESCHHHHHHHHHHHHHT-TCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCC
T ss_pred eEEEEEeCCHHHHHHHHHHHHHh-CCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCc
Confidence 47999999999999999988776 22212677899999877654 489999998766654
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.84 E-value=1e-08 Score=94.23 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=72.7
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--------------------------------------CEEEE
Q 023034 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SLVVA 206 (288)
Q Consensus 165 ~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v~g 206 (288)
....++......++..|||++||+|.++..++..+.+ .+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 3455666666667889999999999999988876422 47999
Q ss_pred EeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEeccc
Q 023034 207 LDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (288)
Q Consensus 207 vD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~~v 257 (288)
+|+++.|++.|++++...+ ....+.+.++|+.+++.+ .+||+|+++--
T Consensus 263 vDid~~ai~~Ar~Na~~~g--l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPP 310 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAG--VDEYIEFNVGDATQFKSE-DEFGFIITNPP 310 (385)
T ss_dssp EESCHHHHHHHHHHHHHHT--CGGGEEEEECCGGGCCCS-CBSCEEEECCC
T ss_pred EECCHHHHHHHHHHHHHcC--CCCceEEEECChhhcCcC-CCCcEEEECCC
Confidence 9999999999999998872 124799999999988764 58999999644
No 253
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.84 E-value=8.7e-09 Score=90.68 Aligned_cols=82 Identities=12% Similarity=0.163 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCCCCEEEEEecCCCC-CCCCCccceEE
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISRL-PFASSSIDAVH 253 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g~~~~~i~~~~~d~~~l-p~~~~sfD~V~ 253 (288)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++.... +....++.++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34689999999999999999987656799999999999999999875421 01146899999998753 33367899999
Q ss_pred eccc
Q 023034 254 AGAA 257 (288)
Q Consensus 254 ~~~v 257 (288)
+...
T Consensus 157 ~d~~ 160 (283)
T 2i7c_A 157 VDSS 160 (283)
T ss_dssp EECC
T ss_pred EcCC
Confidence 9554
No 254
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.84 E-value=2.8e-09 Score=95.31 Aligned_cols=81 Identities=16% Similarity=0.141 Sum_probs=64.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCCCCCEEEEEecCCC-CCCCCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR-LPFASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g~~~~~i~~~~~d~~~-lp~~~~sfD~V~~ 254 (288)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++.... +....++.++.+|+.+ ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4679999999999999999987656799999999999999999875420 0114689999999875 3335678999998
Q ss_pred ccc
Q 023034 255 GAA 257 (288)
Q Consensus 255 ~~v 257 (288)
...
T Consensus 188 d~~ 190 (314)
T 2b2c_A 188 DSS 190 (314)
T ss_dssp CCC
T ss_pred cCC
Confidence 553
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.84 E-value=1.2e-08 Score=93.92 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=72.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--------------------------------------CEE
Q 023034 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SLV 204 (288)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v 204 (288)
+.....++......++..|||.+||+|.++..++..+.+ .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 333556666666667889999999999999888876432 469
Q ss_pred EEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 205 VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 205 ~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
+|+|+++.|++.|++++...+ ....+.+.++|+.+++.+ .+||+|+++
T Consensus 267 ~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~~~~~-~~fD~Iv~N 314 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAG--LGDLITFRQLQVADFQTE-DEYGVVVAN 314 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTT--CTTCSEEEECCGGGCCCC-CCSCEEEEC
T ss_pred EEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHhCCCC-CCCCEEEEC
Confidence 999999999999999998872 234699999999998764 589999998
No 256
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.82 E-value=1.7e-08 Score=92.16 Aligned_cols=112 Identities=13% Similarity=0.172 Sum_probs=79.0
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--
Q 023034 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (288)
Q Consensus 166 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (288)
.+.+.+++... +.+|||+|||+|.++..+++... +|+|+|+|+.+++.|+++++.. | ..++.++.+|+.++.
T Consensus 203 ~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~n-g--~~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 203 LEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAAN-H--IDNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHT-T--CCSEEEECCCSHHHHHH
T ss_pred HHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHc-C--CCceEEEECCHHHHHHH
Confidence 44555555543 57899999999999999988665 9999999999999999999876 2 358999999987642
Q ss_pred CCC--------------CccceEEeccccccCC-Cccccc---ceEEEEecCcccHHH
Q 023034 244 FAS--------------SSIDAVHAGAAIHCWS-SPSTGV---GVFFQVTLIIHVVED 283 (288)
Q Consensus 244 ~~~--------------~sfD~V~~~~vl~h~~-d~~~~l---G~lvi~t~~~~~l~e 283 (288)
+.. .+||+|+..---.-+. ...+.+ |.+++.+-.+.++..
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyvsc~p~t~ar 334 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCK 334 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEEESCHHHHHH
T ss_pred HhhccccccccccccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 121 3799998732111000 001111 888888877766553
No 257
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.81 E-value=9.8e-10 Score=95.55 Aligned_cols=88 Identities=16% Similarity=0.141 Sum_probs=66.9
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCH-------HHHHHHHHHHHhcCCCCCCCEEEEEecCCCC
Q 023034 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE-------NMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~-------~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l 242 (288)
...+...++.+|||+|||+|.++..+++.+. +|+|+|+++ .+++.|+++++..+ ...++.++++|+.++
T Consensus 76 ~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~--~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 76 AKAVNHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQD--TAARINLHFGNAAEQ 151 (258)
T ss_dssp HHHTTGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHH--HHTTEEEEESCHHHH
T ss_pred HHHhCcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhC--CccCeEEEECCHHHH
Confidence 3334444578999999999999999999865 999999999 99999988766541 123599999999874
Q ss_pred -C-CCC--CccceEEeccccccC
Q 023034 243 -P-FAS--SSIDAVHAGAAIHCW 261 (288)
Q Consensus 243 -p-~~~--~sfD~V~~~~vl~h~ 261 (288)
+ +++ ++||+|++.-.+.|.
T Consensus 152 l~~~~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC---
T ss_pred HHhhhccCCCccEEEECCCCCCc
Confidence 3 444 789999998766653
No 258
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.81 E-value=2e-08 Score=92.04 Aligned_cols=88 Identities=13% Similarity=0.125 Sum_probs=71.7
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--------------------------------------CEEEE
Q 023034 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SLVVA 206 (288)
Q Consensus 165 ~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v~g 206 (288)
....++......++..|||.+||+|.++..++..+.+ .+++|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 3455666666667889999999999999988876432 36999
Q ss_pred EeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 207 LDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 207 vD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
+|+++.|++.|++++...+ ....+.+.++|+.+++.+ .+||+|+++
T Consensus 262 vDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~l~~~-~~fD~Iv~N 307 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVG--LEDVVKLKQMRLQDFKTN-KINGVLISN 307 (384)
T ss_dssp EESCHHHHHHHHHHHHHTT--CTTTEEEEECCGGGCCCC-CCSCEEEEC
T ss_pred EECCHHHHHHHHHHHHHcC--CCCceEEEECChHHCCcc-CCcCEEEEC
Confidence 9999999999999998872 234699999999998765 489999997
No 259
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.80 E-value=6.8e-09 Score=90.40 Aligned_cols=89 Identities=12% Similarity=0.044 Sum_probs=69.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~-~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.+.+|||||||+|.++..+.+. + .+|+++|+++.|++.|++++... .+...+++.++.+|+.+.. ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4679999999999999999888 5 79999999999999999876431 0012468999999998765 789999986
Q ss_pred cccccCCCccccc----------ceEEEEe
Q 023034 256 AAIHCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 256 ~vl~h~~d~~~~l----------G~lvi~t 275 (288)
..+|..++ |.+++..
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 34454433 7777754
No 260
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.79 E-value=8.3e-09 Score=90.70 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=62.7
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CC-------CCCCEEEEEecCCCC-CCCCC
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NF-------PKENFLLVRADISRL-PFASS 247 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g~-------~~~~i~~~~~d~~~l-p~~~~ 247 (288)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.|++++ ... +. ...++.++.+|+.+. +. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 4679999999999999999988 5579999999999999999987 220 11 246899999998652 33 57
Q ss_pred ccceEEeccc
Q 023034 248 SIDAVHAGAA 257 (288)
Q Consensus 248 sfD~V~~~~v 257 (288)
+||+|++...
T Consensus 152 ~fD~Ii~d~~ 161 (281)
T 1mjf_A 152 GFDVIIADST 161 (281)
T ss_dssp CEEEEEEECC
T ss_pred CeeEEEECCC
Confidence 8999998654
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.77 E-value=3.7e-08 Score=87.72 Aligned_cols=83 Identities=16% Similarity=0.156 Sum_probs=68.8
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC-
Q 023034 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS- 246 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~- 246 (288)
+...+...++.+|||+|||+|..+..+++. +..++|+++|+++.+++.++++++..+ ..++.++.+|+..++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g---~~~v~~~~~D~~~~~~~~~ 170 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG---VSCCELAEEDFLAVSPSDP 170 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGSCTTCG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCeEEEEeCChHhcCcccc
Confidence 344566778999999999999999999886 344699999999999999999998872 357999999998775432
Q ss_pred --CccceEEe
Q 023034 247 --SSIDAVHA 254 (288)
Q Consensus 247 --~sfD~V~~ 254 (288)
.+||.|++
T Consensus 171 ~~~~fD~Vl~ 180 (309)
T 2b9e_A 171 RYHEVHYILL 180 (309)
T ss_dssp GGTTEEEEEE
T ss_pred ccCCCCEEEE
Confidence 57999997
No 262
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.75 E-value=6.8e-09 Score=97.12 Aligned_cols=85 Identities=15% Similarity=0.071 Sum_probs=69.7
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~ 245 (288)
.+...+...++.+|||+|||+|..+..+++.. ..+.|+++|+++.+++.++++++..+ ..++.++.+|+..++ ..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g---~~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG---VSNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT---CSSEEEECCCHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEeCCHHHhhhhc
Confidence 34455667789999999999999999998863 33699999999999999999998872 357999999988764 23
Q ss_pred CCccceEEec
Q 023034 246 SSSIDAVHAG 255 (288)
Q Consensus 246 ~~sfD~V~~~ 255 (288)
+++||+|++.
T Consensus 173 ~~~FD~Il~D 182 (456)
T 3m4x_A 173 SGFFDRIVVD 182 (456)
T ss_dssp TTCEEEEEEE
T ss_pred cccCCEEEEC
Confidence 5789999984
No 263
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.70 E-value=1.2e-08 Score=93.98 Aligned_cols=76 Identities=11% Similarity=0.125 Sum_probs=63.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CC-CCCccceEEe
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF-ASSSIDAVHA 254 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~-~~~sfD~V~~ 254 (288)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++++...+. ..++.++++|+.+. +. ++++||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~g-l~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNE-GKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCT-TCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccC-CCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 378999999999999999998875 9999999999999999998765100 36899999999874 32 2468999998
Q ss_pred c
Q 023034 255 G 255 (288)
Q Consensus 255 ~ 255 (288)
.
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 4
No 264
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.68 E-value=1.9e-08 Score=92.92 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=69.4
Q ss_pred CCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEE
Q 023034 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 235 (288)
Q Consensus 157 ~g~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~ 235 (288)
+.++.|....+.+.+.+...++.+|||+|||+|.++..++++. +..+++|+|+++.+++.| .++.++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~ 86 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGI 86 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEE
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEE
Confidence 3467788778888888876567799999999999999999863 346999999999988766 257899
Q ss_pred EecCCCCCCCCCccceEEec
Q 023034 236 RADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 236 ~~d~~~lp~~~~sfD~V~~~ 255 (288)
++|+...+. .++||+|+++
T Consensus 87 ~~D~~~~~~-~~~fD~Ii~N 105 (421)
T 2ih2_A 87 LADFLLWEP-GEAFDLILGN 105 (421)
T ss_dssp ESCGGGCCC-SSCEEEEEEC
T ss_pred eCChhhcCc-cCCCCEEEEC
Confidence 999987653 4689999995
No 265
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.66 E-value=4.1e-09 Score=93.80 Aligned_cols=94 Identities=14% Similarity=0.064 Sum_probs=64.8
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCCCCEEEEEe-cCCCCCCCCCcc
Q 023034 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY----SENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSI 249 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~----s~~~l~~A~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~~sf 249 (288)
..++.+|||+|||+|.++..+++. . +|+|+|+ ++.+++.+. .+.. ...++.++++ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~--~V~gvD~~~~~~~~~~~~~~--~~~~---~~~~v~~~~~~D~~~l~--~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-K--NVREVKGLTKGGPGHEEPIP--MSTY---GWNLVRLQSGVDVFFIP--PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-T--TEEEEEEECCCSTTSCCCCC--CCST---TGGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-C--CEEEEeccccCchhHHHHHH--hhhc---CCCCeEEEeccccccCC--cCCC
Confidence 345789999999999999999988 3 7999999 564432111 0000 1256899999 888775 5689
Q ss_pred ceEEeccccc---cCCCcc---ccc----------ceEEEEecCc
Q 023034 250 DAVHAGAAIH---CWSSPS---TGV----------GVFFQVTLII 278 (288)
Q Consensus 250 D~V~~~~vl~---h~~d~~---~~l----------G~lvi~t~~~ 278 (288)
|+|++..+++ +..+.. .+| |.|++.++.+
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9999976643 222221 122 8899888766
No 266
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.55 E-value=3.9e-07 Score=87.05 Aligned_cols=115 Identities=20% Similarity=0.139 Sum_probs=88.5
Q ss_pred cchhhhhHHHHhhhhh-----cCCCCCcHHHHHHHHhhcC----CCCCCeEEEEcCccchHHHHHHHhC---CCCEEEEE
Q 023034 140 PFMSFIYERGWRQNFV-----WGGFPGPEKEFELMKGYLK----PVLGGNIIDASCGSGLFSRIFAKSG---LFSLVVAL 207 (288)
Q Consensus 140 ~~~s~~~~~~wr~~~~-----~~g~~~~~~~~~~l~~~l~----~~~~~~VLDiGcG~G~~~~~l~~~~---~~~~v~gv 207 (288)
..+...|+...++... .+.|++|....+.+.+.+. +.++.+|||.+||+|.++..+.+.. ....++|+
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~ 254 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ 254 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE
Confidence 4566667766554331 2348899988888888776 4568899999999999998888763 24589999
Q ss_pred eCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--C-CCCCccceEEec
Q 023034 208 DYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--P-FASSSIDAVHAG 255 (288)
Q Consensus 208 D~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p-~~~~sfD~V~~~ 255 (288)
|+++.+++.|+.++... |....++.+.++|.... | .....||+|+++
T Consensus 255 Eid~~~~~lA~~Nl~l~-gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaN 304 (542)
T 3lkd_A 255 ELNTSTYNLARMNMILH-GVPIENQFLHNADTLDEDWPTQEPTNFDGVLMN 304 (542)
T ss_dssp ESCHHHHHHHHHHHHHT-TCCGGGEEEEESCTTTSCSCCSSCCCBSEEEEC
T ss_pred ECcHHHHHHHHHHHHHc-CCCcCccceEecceecccccccccccccEEEec
Confidence 99999999999998776 33235688999998866 3 456789999986
No 267
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.51 E-value=1.1e-07 Score=82.50 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=67.0
Q ss_pred HHHHhhcCCCCC--CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-C--C---CCCCEEEEEec
Q 023034 167 ELMKGYLKPVLG--GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-N--F---PKENFLLVRAD 238 (288)
Q Consensus 167 ~~l~~~l~~~~~--~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g--~---~~~~i~~~~~d 238 (288)
+.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|+++.+++.+++.++... + . ...++.++++|
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 345555655556 8999999999999999999876 89999999998777776654220 0 0 01468999999
Q ss_pred CCC-CCCCCCccceEEecccccc
Q 023034 239 ISR-LPFASSSIDAVHAGAAIHC 260 (288)
Q Consensus 239 ~~~-lp~~~~sfD~V~~~~vl~h 260 (288)
+.+ ++.....||+|++.-.+.+
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCC
T ss_pred HHHHHHhCcccCCEEEEcCCCCC
Confidence 875 3322247999999766654
No 268
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.50 E-value=1.6e-07 Score=82.70 Aligned_cols=95 Identities=15% Similarity=0.023 Sum_probs=63.8
Q ss_pred cCCCCCCeEEEEcCc------cchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEE-EEecCCCCCC
Q 023034 173 LKPVLGGNIIDASCG------SGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL-VRADISRLPF 244 (288)
Q Consensus 173 l~~~~~~~VLDiGcG------~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~-~~~d~~~lp~ 244 (288)
+...++.+|||+||| +|. ..+++. ++..+|+|+|+|+. + .++.+ +++|+.++++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCc
Confidence 345678899999994 466 444444 33569999999996 1 25677 9999998876
Q ss_pred CCCccceEEecccccc-----CCCcc------ccc----------ceEEEEecCcccHHHHHh
Q 023034 245 ASSSIDAVHAGAAIHC-----WSSPS------TGV----------GVFFQVTLIIHVVEDLAV 286 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h-----~~d~~------~~l----------G~lvi~t~~~~~l~el~~ 286 (288)
+ ++||+|+++...+. ..... .++ |.|++..+......++.+
T Consensus 121 ~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~ 182 (290)
T 2xyq_A 121 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYK 182 (290)
T ss_dssp S-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHH
T ss_pred c-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHH
Confidence 4 78999999643221 11110 122 999998877665555543
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.47 E-value=4.7e-07 Score=86.63 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=78.5
Q ss_pred CCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC------------------CCEEEEEeCCHHHHHHHH
Q 023034 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL------------------FSLVVALDYSENMLKQCY 218 (288)
Q Consensus 157 ~g~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~------------------~~~v~gvD~s~~~l~~A~ 218 (288)
+.+++|....+.+.+.+.+.++.+|||.+||+|.++..+.+... ...++|+|+++.+++.|+
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 34888888888888888887888999999999999988776420 137999999999999999
Q ss_pred HHHHhcCCCCC---CCEEEEEecCCCCC-CCCCccceEEecccccc
Q 023034 219 EFVQQESNFPK---ENFLLVRADISRLP-FASSSIDAVHAGAAIHC 260 (288)
Q Consensus 219 ~~~~~~~g~~~---~~i~~~~~d~~~lp-~~~~sfD~V~~~~vl~h 260 (288)
.++... |... ....+.++|....+ ...+.||+|+++--+..
T Consensus 229 ~nl~l~-gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~ 273 (541)
T 2ar0_A 229 MNCLLH-DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGS 273 (541)
T ss_dssp HHHHTT-TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTT
T ss_pred HHHHHh-CCCccccccCCeEeCCCcccccccccCCeEEEECCCccc
Confidence 988766 2211 02678899987653 34578999999755443
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.46 E-value=5.5e-07 Score=88.75 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=70.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC------------------------------------------CC
Q 023034 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG------------------------------------------LF 201 (288)
Q Consensus 164 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~------------------------------------------~~ 201 (288)
.....++......++..|||.+||+|.++..++..+ +.
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 334556666666678899999999999998877652 11
Q ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC--CCCCCccceEEec
Q 023034 202 SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAG 255 (288)
Q Consensus 202 ~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~sfD~V~~~ 255 (288)
..++|+|+++.|++.|++++...+ ....+.+.++|+.++ |...++||+|+++
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~ag--v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~N 310 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAG--IGELITFEVKDVAQLTNPLPKGPYGTVLSN 310 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEECCGGGCCCSCTTCCCCEEEEC
T ss_pred ccEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhCccccccCCCCEEEeC
Confidence 479999999999999999998872 234589999999887 4434589999997
No 271
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.40 E-value=1.1e-07 Score=64.48 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=40.4
Q ss_pred ccCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCCeeeeeccCC
Q 023034 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASG 122 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 122 (288)
.-+++++||.|+++|.... ..+.+.|+.|+..|++++|++.++.+..
T Consensus 6 ~LLeiL~CP~ck~~L~~~~---------~~g~LvC~~c~~~YPI~dGIPvmL~~Ea 52 (67)
T 2jny_A 6 QLLEVLACPKDKGPLRYLE---------SEQLLVNERLNLAYRIDDGIPVLLIDEA 52 (67)
T ss_dssp GGTCCCBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCSSCC
T ss_pred HHHHHhCCCCCCCcCeEeC---------CCCEEEcCCCCccccCCCCEeeeChhHh
Confidence 4578999999999998753 4578999999999999999999997643
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.40 E-value=2.3e-07 Score=84.84 Aligned_cols=79 Identities=16% Similarity=0.068 Sum_probs=62.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC------------CCCCEEEEEecCCCCCC
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF------------PKENFLLVRADISRLPF 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~------------~~~~i~~~~~d~~~lp~ 244 (288)
++.+|||+|||+|.++..+++..+..+|+++|+++.+++.++++++..... ...++.++++|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 478999999999999999999854468999999999999999999875100 02348999999876421
Q ss_pred -CCCccceEEec
Q 023034 245 -ASSSIDAVHAG 255 (288)
Q Consensus 245 -~~~sfD~V~~~ 255 (288)
..+.||+|+..
T Consensus 127 ~~~~~fD~I~lD 138 (378)
T 2dul_A 127 ERHRYFHFIDLD 138 (378)
T ss_dssp HSTTCEEEEEEC
T ss_pred hccCCCCEEEeC
Confidence 13579999963
No 273
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.38 E-value=1.4e-07 Score=64.28 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=39.8
Q ss_pred ccCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCCeeeeeccC
Q 023034 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (288)
.-+++++||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ---------DKQELWSRQAKLAYPIKDGIPYMLENE 49 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCTTT
T ss_pred HHhhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 4578999999999998753 458899999999999999999998763
No 274
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.36 E-value=7.2e-07 Score=77.69 Aligned_cols=93 Identities=19% Similarity=0.295 Sum_probs=72.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC---
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--- 243 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp--- 243 (288)
+.+++.+...+++.+||.+||.|..+..+++++ ++|+|+|.++.+++.|++ +.. .++.++++++.+++
T Consensus 12 ~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~--g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 12 QEALDLLAVRPGGVYVDATLGGAGHARGILERG--GRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp HHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCC--CEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHHH
Confidence 556677777789999999999999999999983 599999999999999998 532 48999999998764
Q ss_pred --CCCCccceEEecc--ccccCCCccccc
Q 023034 244 --FASSSIDAVHAGA--AIHCWSSPSTGV 268 (288)
Q Consensus 244 --~~~~sfD~V~~~~--vl~h~~d~~~~l 268 (288)
...+++|.|++.. .-.++.++++-+
T Consensus 83 ~~~g~~~vDgIL~DLGvSS~Qld~~~RGF 111 (285)
T 1wg8_A 83 AALGVERVDGILADLGVSSFHLDDPSRGF 111 (285)
T ss_dssp HHTTCSCEEEEEEECSCCHHHHHCGGGCC
T ss_pred HHcCCCCcCEEEeCCccccccccccccCc
Confidence 1235799999743 334455555544
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.35 E-value=1.3e-06 Score=84.44 Aligned_cols=74 Identities=12% Similarity=0.000 Sum_probs=57.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhC----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSG----LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAV 252 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~----~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V 252 (288)
.+..|||||||+|.+.....+.+ ...+|++||-|+ |+..|++..+.+ .....|+++.+|++++..+ +++|+|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N--~~~dkVtVI~gd~eev~LP-EKVDII 432 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE--EWGSQVTVVSSDMREWVAP-EKADII 432 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH--TTGGGEEEEESCTTTCCCS-SCEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc--cCCCeEEEEeCcceeccCC-cccCEE
Confidence 34679999999999855444432 223789999997 777888877665 3467899999999998765 689999
Q ss_pred Ee
Q 023034 253 HA 254 (288)
Q Consensus 253 ~~ 254 (288)
++
T Consensus 433 VS 434 (637)
T 4gqb_A 433 VS 434 (637)
T ss_dssp EC
T ss_pred EE
Confidence 98
No 276
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.35 E-value=1.6e-07 Score=64.14 Aligned_cols=46 Identities=24% Similarity=0.327 Sum_probs=39.6
Q ss_pred ccCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCCeeeeeccC
Q 023034 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (288)
.-+++++||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 4 ~LLeiL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~e 49 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLSA---------DKTELISKGAGLAYPIRDGIPVMLESE 49 (69)
T ss_dssp CGGGTCCCTTTCCCCEECT---------TSSEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHHhheeCCCCCCcCeEeC---------CCCEEEcCCCCcEecCcCCeeeeChhh
Confidence 3478899999999998753 357899999999999999999998763
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.34 E-value=1.1e-06 Score=84.17 Aligned_cols=116 Identities=20% Similarity=0.099 Sum_probs=84.7
Q ss_pred CcchhhhhHHHHhhhhh-----cCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-------------
Q 023034 139 MPFMSFIYERGWRQNFV-----WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL------------- 200 (288)
Q Consensus 139 ~~~~s~~~~~~wr~~~~-----~~g~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~------------- 200 (288)
...+...|+...++... .+.|++|....+.+.+.+.+.++ +|||.+||+|.++..+.+...
T Consensus 202 ~D~lG~~yE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~ 280 (544)
T 3khk_A 202 KDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQ 280 (544)
T ss_dssp CCSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHH
Confidence 35666677765554321 23588999999999999887655 999999999999887754310
Q ss_pred --CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-CCCCccceEEeccc
Q 023034 201 --FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHAGAA 257 (288)
Q Consensus 201 --~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~sfD~V~~~~v 257 (288)
...++|+|+++.+++.|+.++... |. ..++.+.++|....+ +.+..||+|+++=-
T Consensus 281 ~~~~~i~G~Eid~~~~~lA~~Nl~l~-gi-~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPP 338 (544)
T 3khk_A 281 KKQISVYGQESNPTTWKLAAMNMVIR-GI-DFNFGKKNADSFLDDQHPDLRADFVMTNPP 338 (544)
T ss_dssp GGGEEEEECCCCHHHHHHHHHHHHHT-TC-CCBCCSSSCCTTTSCSCTTCCEEEEEECCC
T ss_pred hhhceEEEEeCCHHHHHHHHHHHHHh-CC-CcccceeccchhcCcccccccccEEEECCC
Confidence 248999999999999999998776 22 223444778876544 45678999999643
No 278
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.34 E-value=1.5e-07 Score=64.48 Aligned_cols=47 Identities=23% Similarity=0.384 Sum_probs=40.3
Q ss_pred ccCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCCeeeeeccCC
Q 023034 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASG 122 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 122 (288)
.-+++++||.|+++|.... ..+.+.|+.|+..|++++|++.++.+..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~Ea 50 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR---------AQAELVCNADRLAFPVRDGVPIMLEAEA 50 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET---------TTTEEEETTTTEEEEEETTEECCCGGGS
T ss_pred HHhhheECCCCCCcCEEeC---------CCCEEEcCCCCceecCCCCeeeeChhhc
Confidence 3578999999999998753 3578999999999999999999998643
No 279
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.33 E-value=3.3e-07 Score=82.77 Aligned_cols=79 Identities=11% Similarity=0.214 Sum_probs=62.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CCC---CCEEEEEecCCCCCC----CCC
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPK---ENFLLVRADISRLPF----ASS 247 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g--~~~---~~i~~~~~d~~~lp~----~~~ 247 (288)
.+.+||+||||+|.+++.+.+.++ .+|+++|+++.+++.|++++....+ ... .++.++.+|+...-- ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 468999999999999999998876 7999999999999999999754311 011 269999999876431 357
Q ss_pred ccceEEecc
Q 023034 248 SIDAVHAGA 256 (288)
Q Consensus 248 sfD~V~~~~ 256 (288)
+||+|+...
T Consensus 267 ~fDvII~D~ 275 (364)
T 2qfm_A 267 EFDYVINDL 275 (364)
T ss_dssp CEEEEEEEC
T ss_pred CceEEEECC
Confidence 899999864
No 280
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.33 E-value=1.3e-07 Score=64.38 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=39.6
Q ss_pred ccCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCCeeeeeccC
Q 023034 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (288)
.-+++++||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDK---------SKDELICKGDRLAFPIKDGIPMMLESE 49 (68)
T ss_dssp CCEEECBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHhhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 3468899999999998753 358899999999999999999999763
No 281
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.25 E-value=1e-06 Score=80.88 Aligned_cols=79 Identities=15% Similarity=0.038 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCCC-EEEEEecCCCCC--CCCCccce
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKEN-FLLVRADISRLP--FASSSIDA 251 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~-i~~~~~d~~~lp--~~~~sfD~ 251 (288)
.++.+|||++||+|.++..++.+..+ .+|+++|+++.+++.++++++.. | ...+ +.++.+|+.++. ...+.||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N-g-l~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-N-IPEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT-T-CCGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh-C-CCCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 35789999999999999999986322 58999999999999999999987 2 1233 899999986531 12457999
Q ss_pred EEecc
Q 023034 252 VHAGA 256 (288)
Q Consensus 252 V~~~~ 256 (288)
|++.-
T Consensus 129 V~lDP 133 (392)
T 3axs_A 129 VDLDP 133 (392)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99854
No 282
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.15 E-value=6.6e-06 Score=72.62 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=52.3
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc
Q 023034 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~ 224 (288)
-|....+.++.... .++..|||++||+|..+..+++.+. +++|+|+++.+++.|++++...
T Consensus 220 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 220 FPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp SCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 34555677776665 5688999999999999999999886 9999999999999999998775
No 283
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=98.13 E-value=9.5e-07 Score=57.75 Aligned_cols=44 Identities=25% Similarity=0.425 Sum_probs=38.3
Q ss_pred ccCCceeCCCCCCCCcccCCCCCccccccCCceecC--CCCcccccCCCeeeeeccC
Q 023034 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCN--TCKKTYSGVGTHFDMTAAS 121 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~--~C~~~~~~~~g~~~~~~~~ 121 (288)
.-+++++||.|+++|.... +.+.|+ .|+..|++++|++.++.++
T Consensus 6 ~lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 6 GLLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp SCTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 4578999999999987642 789999 9999999999999998754
No 284
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.12 E-value=1.1e-05 Score=67.19 Aligned_cols=77 Identities=13% Similarity=0.066 Sum_probs=58.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-CCCCEEEEEecCCCC-------------
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF-PKENFLLVRADISRL------------- 242 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~-~~~~i~~~~~d~~~l------------- 242 (288)
+..+|||||| |+-+..+++. ++++|+.+|.++...+.|+++++.. |. ...++.++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~-g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAAN-PPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHS-CCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 3679999998 4666777764 2469999999999999999999886 21 046899999997642
Q ss_pred --C--------C-CCCccceEEeccc
Q 023034 243 --P--------F-ASSSIDAVHAGAA 257 (288)
Q Consensus 243 --p--------~-~~~sfD~V~~~~v 257 (288)
+ . ..++||+|+.-.-
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCC
Confidence 2 1 2378999998664
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.07 E-value=6.4e-06 Score=74.46 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.+|.++||+||++|.++..+.+++. .|++||+.+ |...... ..++.++++|+.....+.+.||+|+|-
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~~---------~~~V~~~~~d~~~~~~~~~~~D~vvsD 277 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLMD---------TGQVTWLREDGFKFRPTRSNISWMVCD 277 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHHT---------TTCEEEECSCTTTCCCCSSCEEEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhcc---------CCCeEEEeCccccccCCCCCcCEEEEc
Confidence 4599999999999999999999986 999999875 3222221 478999999999887777899999996
Q ss_pred ccc
Q 023034 256 AAI 258 (288)
Q Consensus 256 ~vl 258 (288)
.+.
T Consensus 278 m~~ 280 (375)
T 4auk_A 278 MVE 280 (375)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.06 E-value=5.1e-06 Score=65.08 Aligned_cols=60 Identities=18% Similarity=0.169 Sum_probs=46.5
Q ss_pred CCeEEEEcCccc-hHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCC-CccceEEe
Q 023034 178 GGNIIDASCGSG-LFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS-SSIDAVHA 254 (288)
Q Consensus 178 ~~~VLDiGcG~G-~~~~~l~~-~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~-~sfD~V~~ 254 (288)
+.+|||||||.| ..+..|++ .+. .|+++|+++..+ .+++.|+.+..+.. ..||+|.+
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av------------------~~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG------------------GIVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST------------------TEECCCSSSCCHHHHTTEEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc------------------ceEEccCCCCcccccCCcCEEEE
Confidence 679999999999 59999997 676 999999988421 17888888743321 47999988
Q ss_pred ccc
Q 023034 255 GAA 257 (288)
Q Consensus 255 ~~v 257 (288)
..-
T Consensus 96 irP 98 (153)
T 2k4m_A 96 IRP 98 (153)
T ss_dssp ESC
T ss_pred cCC
Confidence 654
No 287
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.00 E-value=2.9e-05 Score=70.84 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=58.3
Q ss_pred CCeEEEEcCccchHHHHHHHh-----------------CCCCEEEEEeCC-----------HHHHHHHHHHHHhcCCCCC
Q 023034 178 GGNIIDASCGSGLFSRIFAKS-----------------GLFSLVVALDYS-----------ENMLKQCYEFVQQESNFPK 229 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~-----------------~~~~~v~gvD~s-----------~~~l~~A~~~~~~~~g~~~ 229 (288)
..+|+|+||++|.++..+... .+..+|+.-|+- +.+.+.+++. . | ..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~-g-~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---N-G-RK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---T-C-CC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---c-c-CC
Confidence 468999999999998877665 244688999988 5555443332 1 1 01
Q ss_pred CCEEEEEecCCC---CCCCCCccceEEeccccccCCCcc
Q 023034 230 ENFLLVRADISR---LPFASSSIDAVHAGAAIHCWSSPS 265 (288)
Q Consensus 230 ~~i~~~~~d~~~---lp~~~~sfD~V~~~~vl~h~~d~~ 265 (288)
.+..|+.+.... -.|+++++|+|+++.+|||+.+..
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p 166 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVP 166 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSC
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCc
Confidence 234566665543 568899999999999999987653
No 288
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=97.99 E-value=2.9e-06 Score=61.55 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=41.7
Q ss_pred ccCCceeCCCCCCCCcccCC------------------CCCccccccCCceecCCCCcccccCCCeeeeecc
Q 023034 67 TSKNVLACPICYKPLTWIGD------------------SSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAA 120 (288)
Q Consensus 67 ~~l~~l~CP~C~~~l~~~~~------------------~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~ 120 (288)
.-+++|+||.|+++|..... .+...+.+..+.|.|+.|+..|++++|++.++.+
T Consensus 4 ~LLdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ 75 (97)
T 2k5r_A 4 KLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPE 75 (97)
T ss_dssp TTCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGG
T ss_pred HHhhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChH
Confidence 35789999999998876431 1112334456789999999999999999999876
No 289
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.99 E-value=1.4e-05 Score=77.67 Aligned_cols=75 Identities=16% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCeEEEEcCccchHHHHHHHh----C---------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC
Q 023034 178 GGNIIDASCGSGLFSRIFAKS----G---------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~----~---------~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (288)
+..|||||||+|.++....+. + ...+|++||.|+.+....+.+... .....|+++.+|++++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N---g~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR---TWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH---TTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc---CCCCeEEEEeCchhhccc
Confidence 568999999999996433222 2 224999999999777666655442 235679999999998866
Q ss_pred C-----CCccceEEec
Q 023034 245 A-----SSSIDAVHAG 255 (288)
Q Consensus 245 ~-----~~sfD~V~~~ 255 (288)
+ .+++|+|++-
T Consensus 487 p~~~~~~ekVDIIVSE 502 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSE 502 (745)
T ss_dssp HHHHTTCCCCSEEEEC
T ss_pred ccccCCCCcccEEEEe
Confidence 3 5789999983
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.91 E-value=5e-05 Score=72.39 Aligned_cols=116 Identities=18% Similarity=0.184 Sum_probs=85.2
Q ss_pred cchhhhhHHHHhhhh----hcCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC----C---------CC
Q 023034 140 PFMSFIYERGWRQNF----VWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG----L---------FS 202 (288)
Q Consensus 140 ~~~s~~~~~~wr~~~----~~~g~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~----~---------~~ 202 (288)
+.++..|+...++.. -.+.|++|....+.+.+.+.+.++.+|+|-+||+|.++..+.+.. . ..
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~ 255 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhh
Confidence 355666776665432 123489999999999999998889999999999999987765531 1 13
Q ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC----CCccceEEecccc
Q 023034 203 LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA----SSSIDAVHAGAAI 258 (288)
Q Consensus 203 ~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~----~~sfD~V~~~~vl 258 (288)
.++|.|+++.+...|+-++-.. | .....+..+|....|.. ...||+|+++=-+
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lh-g--~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLH-G--LEYPRIDPENSLRFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHH-T--CSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCS
T ss_pred hhhhhhccHHHHHHHHHHHHhc-C--CccccccccccccCchhhhcccccceEEEecCCC
Confidence 6999999999999999887766 2 23345677887665532 3479999996433
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.87 E-value=1.2e-05 Score=69.66 Aligned_cols=108 Identities=15% Similarity=0.086 Sum_probs=67.7
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceE
Q 023034 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAV 252 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V 252 (288)
....++.+|||+|||+|.++..+++..+-..+.|+|++..+....... ... ..++..+..++....+.++.||+|
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~----g~~ii~~~~~~dv~~l~~~~~DlV 144 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSL----GWNIITFKDKTDIHRLEPVKCDTL 144 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBT----TGGGEEEECSCCTTTSCCCCCSEE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcC----CCCeEEEeccceehhcCCCCccEE
Confidence 344567899999999999999988764434788888875431100000 000 115556677776667778899999
Q ss_pred Eeccccc----cCCCcc---------ccc----ceEEEEecC--cccHHHHH
Q 023034 253 HAGAAIH----CWSSPS---------TGV----GVFFQVTLI--IHVVEDLA 285 (288)
Q Consensus 253 ~~~~vl~----h~~d~~---------~~l----G~lvi~t~~--~~~l~el~ 285 (288)
++..+.+ .+.... ..| |.|++..|. .....++.
T Consensus 145 lsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~ 196 (277)
T 3evf_A 145 LCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKL 196 (277)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHH
T ss_pred EecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHH
Confidence 9977554 111111 111 799999988 44444443
No 292
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.86 E-value=2.3e-05 Score=77.22 Aligned_cols=102 Identities=15% Similarity=0.031 Sum_probs=68.2
Q ss_pred CCCCCcHHHHHHHHhh----cCC--CCCCeEEEEcCccchHHHHHHHhCC---CCEEEEEeCCHHHHHHH--HHHHHhcC
Q 023034 157 GGFPGPEKEFELMKGY----LKP--VLGGNIIDASCGSGLFSRIFAKSGL---FSLVVALDYSENMLKQC--YEFVQQES 225 (288)
Q Consensus 157 ~g~~~~~~~~~~l~~~----l~~--~~~~~VLDiGcG~G~~~~~l~~~~~---~~~v~gvD~s~~~l~~A--~~~~~~~~ 225 (288)
+.++.|....+.+... +.. .++.+|||.|||+|.++..+++... ..+++|+|+++.+++.| +.++....
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 4477888777776665 332 3578999999999999999988753 35799999999999999 44433210
Q ss_pred -CCCCCCEEEEEecCCCC-CCCCCccceEEecccc
Q 023034 226 -NFPKENFLLVRADISRL-PFASSSIDAVHAGAAI 258 (288)
Q Consensus 226 -g~~~~~i~~~~~d~~~l-p~~~~sfD~V~~~~vl 258 (288)
........+...|+... +...+.||+|+++=-.
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPY 409 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBC
T ss_pred hhcCCCcceEEecchhcccccccCCCCEEEECCCc
Confidence 00012234455555543 2345789999996443
No 293
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.77 E-value=0.00015 Score=63.59 Aligned_cols=80 Identities=13% Similarity=0.266 Sum_probs=65.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC-C-CCCCCEEEEEecCCCC-CCCCCccceEE
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-N-FPKENFLLVRADISRL-PFASSSIDAVH 253 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~-g-~~~~~i~~~~~d~~~l-p~~~~sfD~V~ 253 (288)
...+||-||.|.|..++.+.+..+..+|+.+|+++.+++.+++.+.... + ...+++.++.+|+... .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 4679999999999999999987655799999999999999999875320 1 1357899999999864 44567899999
Q ss_pred ecc
Q 023034 254 AGA 256 (288)
Q Consensus 254 ~~~ 256 (288)
.-.
T Consensus 163 ~D~ 165 (294)
T 3o4f_A 163 SDC 165 (294)
T ss_dssp ESC
T ss_pred EeC
Confidence 753
No 294
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.71 E-value=0.00013 Score=66.25 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCeEEEEcCccchHHHHHHH--------hC-------CCCEEEEEeCCHHHHHHHHHHHHhcCC---------CCCCCEE
Q 023034 178 GGNIIDASCGSGLFSRIFAK--------SG-------LFSLVVALDYSENMLKQCYEFVQQESN---------FPKENFL 233 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~--------~~-------~~~~v~gvD~s~~~l~~A~~~~~~~~g---------~~~~~i~ 233 (288)
..+|+|+|||+|.++..+.. .. +..+|+.-|+-.+.-...-+.+..... ....+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999998887722 21 457888999888765444444332100 0000112
Q ss_pred EEE---ecCCCCCCCCCccceEEeccccccCCCcc
Q 023034 234 LVR---ADISRLPFASSSIDAVHAGAAIHCWSSPS 265 (288)
Q Consensus 234 ~~~---~d~~~lp~~~~sfD~V~~~~vl~h~~d~~ 265 (288)
++. +.+..-.|++++||+|+++.+|||+.+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p 167 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVP 167 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCC
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCc
Confidence 333 33334568899999999999999987543
No 295
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.70 E-value=3.5e-05 Score=68.63 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=74.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--
Q 023034 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (288)
Q Consensus 167 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (288)
+.+++.|...+++.++|..+|.|..+..+++. ++.++|+|+|.++.+++.|+ ++ . ..++.++++++.++.
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~----~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D----DPRFSIIHGPFSALGEY 119 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C----CTTEEEEESCGGGHHHH
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c----CCcEEEEeCCHHHHHHH
Confidence 56677788888999999999999999999987 56789999999999999984 43 2 468999999988763
Q ss_pred ---CC-CCccceEEeccccc--cCCCccccc
Q 023034 244 ---FA-SSSIDAVHAGAAIH--CWSSPSTGV 268 (288)
Q Consensus 244 ---~~-~~sfD~V~~~~vl~--h~~d~~~~l 268 (288)
.. .+++|.|+....+. ++.++++-+
T Consensus 120 L~~~g~~~~vDgILfDLGVSS~QlD~~eRGF 150 (347)
T 3tka_A 120 VAERDLIGKIDGILLDLGVSSPQLDDAERGF 150 (347)
T ss_dssp HHHTTCTTCEEEEEEECSCCHHHHHCGGGCC
T ss_pred HHhcCCCCcccEEEECCccCHHHhcCCCCCC
Confidence 11 13699999876554 556666654
No 296
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.59 E-value=2.3e-05 Score=67.93 Aligned_cols=81 Identities=14% Similarity=0.063 Sum_probs=52.9
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEE
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~ 253 (288)
...++.+|||+|||+|.|+..+++..+-..|+|+|++..+...+... ... ..++.....+.....+....+|+|+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~----g~~ii~~~~~~dv~~l~~~~~DvVL 161 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL----GWNLIRFKDKTDVFNMEVIPGDTLL 161 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT----TGGGEEEECSCCGGGSCCCCCSEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC----CCceEEeeCCcchhhcCCCCcCEEE
Confidence 45678899999999999999988764445799999987542222110 000 1233344444333345678899999
Q ss_pred eccccc
Q 023034 254 AGAAIH 259 (288)
Q Consensus 254 ~~~vl~ 259 (288)
+..+..
T Consensus 162 SDmApn 167 (282)
T 3gcz_A 162 CDIGES 167 (282)
T ss_dssp ECCCCC
T ss_pred ecCccC
Confidence 977655
No 297
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.48 E-value=0.00032 Score=60.52 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=51.2
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc
Q 023034 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~ 224 (288)
-|....+.+++... .++..|||..||+|..+..+.+.+. +++|+|+++.+++.|++++...
T Consensus 197 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 197 KPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhc
Confidence 34556667766654 5688999999999999999999886 9999999999999999998764
No 298
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.46 E-value=7.6e-05 Score=67.47 Aligned_cols=84 Identities=13% Similarity=0.130 Sum_probs=60.7
Q ss_pred CCeEEEEcCccchHHHHHHHh----------------CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecC--
Q 023034 178 GGNIIDASCGSGLFSRIFAKS----------------GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-- 239 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~----------------~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~-- 239 (288)
.-+|+|+||++|.++..+... .|..+|+..|+..++....-+.+.... ...+..|+.+..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecchh
Confidence 467999999999876654433 344689999999998888877654320 001334555443
Q ss_pred -CCCCCCCCccceEEeccccccCCC
Q 023034 240 -SRLPFASSSIDAVHAGAAIHCWSS 263 (288)
Q Consensus 240 -~~lp~~~~sfD~V~~~~vl~h~~d 263 (288)
-...|+++++|+|+++.+|||+.+
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~ 154 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQ 154 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSS
T ss_pred hhhccCCCCceEEEEehhhhhhccc
Confidence 346789999999999999999876
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.43 E-value=0.00033 Score=63.18 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=57.5
Q ss_pred HHHHHHHhhcCCC------CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEe
Q 023034 164 KEFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 237 (288)
Q Consensus 164 ~~~~~l~~~l~~~------~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~ 237 (288)
...+.+.+.+... ++..|||||.|.|.++..|.+.....+|+++|+++.++...++.+ . ..++.++.+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii~~ 112 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQILKR 112 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEECS
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEEEC
Confidence 3346666666543 358899999999999999998732248999999999999998875 2 368999999
Q ss_pred cCCCC
Q 023034 238 DISRL 242 (288)
Q Consensus 238 d~~~l 242 (288)
|+..+
T Consensus 113 D~l~~ 117 (353)
T 1i4w_A 113 DPYDW 117 (353)
T ss_dssp CTTCH
T ss_pred Cccch
Confidence 99654
No 300
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.34 E-value=0.00034 Score=63.24 Aligned_cols=85 Identities=13% Similarity=0.053 Sum_probs=69.0
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC----CCCCEEEEEecCCCCC-
Q 023034 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF----PKENFLLVRADISRLP- 243 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~----~~~~i~~~~~d~~~lp- 243 (288)
....+.+.+|.+|||+.+|.|.=+..+++.+....|+++|+++.-++..+++++.. +. ...++.+...|+..++
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~-~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSY-VPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHH-SCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHh-hhhhhccCCceEEEeCchhhcch
Confidence 34566788899999999999999988888877678999999999999999998765 21 1247888888887664
Q ss_pred CCCCccceEEe
Q 023034 244 FASSSIDAVHA 254 (288)
Q Consensus 244 ~~~~sfD~V~~ 254 (288)
...+.||.|+.
T Consensus 219 ~~~~~fD~VLl 229 (359)
T 4fzv_A 219 LEGDTYDRVLV 229 (359)
T ss_dssp HSTTCEEEEEE
T ss_pred hccccCCEEEE
Confidence 34578999997
No 301
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.31 E-value=0.00021 Score=61.61 Aligned_cols=80 Identities=13% Similarity=0.008 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHh-------CCC-----CEEEEEeCCH---HHHH-----------HHHHHHHhcC----
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKS-------GLF-----SLVVALDYSE---NMLK-----------QCYEFVQQES---- 225 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~-------~~~-----~~v~gvD~s~---~~l~-----------~A~~~~~~~~---- 225 (288)
.++.+|||||+|+|..+..+.+. .+. .+++++|..+ ++++ .|++.++.+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34679999999999988776553 442 4899999876 5444 5566655410
Q ss_pred -------CCCCCCEEEEEecCCC-CCCCC----CccceEEec
Q 023034 226 -------NFPKENFLLVRADISR-LPFAS----SSIDAVHAG 255 (288)
Q Consensus 226 -------g~~~~~i~~~~~d~~~-lp~~~----~sfD~V~~~ 255 (288)
.....+++++.+|+.+ ++.-+ ..||+|+..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD 180 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLD 180 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEEC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEEC
Confidence 0012467899999876 44322 279999984
No 302
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.25 E-value=0.00067 Score=57.22 Aligned_cols=100 Identities=18% Similarity=0.146 Sum_probs=64.6
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEe-cCCCCCCCCCccceE
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSIDAV 252 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~~sfD~V 252 (288)
...++.+|||+||++|.++.+++.......|+|+|+-..--+.-+ ..+. ..+..++|..+ |+..++- ..+|.|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s---~gwn~v~fk~gvDv~~~~~--~~~Dtl 148 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMST---YGWNIVKLMSGKDVFYLPP--EKCDTL 148 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCC---TTTTSEEEECSCCGGGCCC--CCCSEE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhh---cCcCceEEEeccceeecCC--ccccEE
Confidence 456788999999999999998877744358999999653110000 0000 11467899999 8766653 669999
Q ss_pred EeccccccCCCcc----c---c-------c--ceEEEEecCccc
Q 023034 253 HAGAAIHCWSSPS----T---G-------V--GVFFQVTLIIHV 280 (288)
Q Consensus 253 ~~~~vl~h~~d~~----~---~-------l--G~lvi~t~~~~~ 280 (288)
+|.-.= --+++. + + | |-|++-.+.+..
T Consensus 149 lcDIge-Ss~~~~vE~~RtlrvLela~~wL~~~~fc~KVl~py~ 191 (267)
T 3p8z_A 149 LCDIGE-SSPSPTVEESRTIRVLKMVEPWLKNNQFCIKVLNPYM 191 (267)
T ss_dssp EECCCC-CCSCHHHHHHHHHHHHHHHGGGCSSCEEEEEESCCCS
T ss_pred EEecCC-CCCChhhhhhHHHHHHHHHHHhcccCCEEEEEccCCC
Confidence 995433 111110 1 1 1 888888887766
No 303
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.20 E-value=0.001 Score=57.91 Aligned_cols=104 Identities=16% Similarity=0.073 Sum_probs=66.3
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEe-cCCCCCCCC
Q 023034 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFAS 246 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~ 246 (288)
.+.+.....++.+|||+||++|.++.+++....-..|+|+|+-..--+.-+ ..++. .+..+.+..+ |+..++.
T Consensus 85 ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql---~w~lV~~~~~~Dv~~l~~-- 158 (321)
T 3lkz_A 85 WLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSY---GWNIVTMKSGVDVFYRPS-- 158 (321)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBT---TGGGEEEECSCCTTSSCC--
T ss_pred HHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhc---CCcceEEEeccCHhhCCC--
Confidence 333334456788999999999999998777643358999999663100000 00000 1234778887 8877764
Q ss_pred CccceEEeccccccCCCcc----c---cc-----------ceEEEEecCc
Q 023034 247 SSIDAVHAGAAIHCWSSPS----T---GV-----------GVFFQVTLII 278 (288)
Q Consensus 247 ~sfD~V~~~~vl~h~~d~~----~---~l-----------G~lvi~t~~~ 278 (288)
..+|+|+|.-. +--+++. + +| |-|++-.+.+
T Consensus 159 ~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 56999999766 5444432 1 11 6888888877
No 304
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.02 E-value=0.00098 Score=58.20 Aligned_cols=81 Identities=9% Similarity=0.051 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCccchHHHHHHHhC-----CCCEEEEEeCCHH--------------------------HHHHHHHHHHhc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSEN--------------------------MLKQCYEFVQQE 224 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~s~~--------------------------~l~~A~~~~~~~ 224 (288)
...+.|||+|+..|..+..+++.. ++.+++++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 346799999999999888776542 3568999996421 467788888887
Q ss_pred CCCCCCCEEEEEecCCC-CC-CCCCccceEEeccc
Q 023034 225 SNFPKENFLLVRADISR-LP-FASSSIDAVHAGAA 257 (288)
Q Consensus 225 ~g~~~~~i~~~~~d~~~-lp-~~~~sfD~V~~~~v 257 (288)
|....++.++.+|+.+ +| +++++||+|+.-.-
T Consensus 185 -gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD 218 (282)
T 2wk1_A 185 -DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD 218 (282)
T ss_dssp -TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC
T ss_pred -CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC
Confidence 3324789999999864 33 34578999998653
No 305
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.71 E-value=0.0014 Score=59.39 Aligned_cols=78 Identities=12% Similarity=0.198 Sum_probs=59.4
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----CCCCEEEEEecCCCC----CCCCC
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF-----PKENFLLVRADISRL----PFASS 247 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~-----~~~~i~~~~~d~~~l----p~~~~ 247 (288)
+.++||-||.|.|..++++.+... .+|+.+|+++.+++.|++.+....+. ..+++.++.+|+... .-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 467999999999999999998754 79999999999999999986432100 024588999997542 12346
Q ss_pred ccceEEec
Q 023034 248 SIDAVHAG 255 (288)
Q Consensus 248 sfD~V~~~ 255 (288)
+||+|+.-
T Consensus 284 ~yDvIIvD 291 (381)
T 3c6k_A 284 EFDYVIND 291 (381)
T ss_dssp CEEEEEEE
T ss_pred ceeEEEEC
Confidence 79999985
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.58 E-value=0.0012 Score=57.53 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEec
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~~ 255 (288)
.++.+|||+||++|.|+..+.+...-..|+|+|+...+....... ... ..++.....+.....+..+.+|+|++.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~-~~~----~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHM-QTL----GWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT----TGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccc-ccc----CCceEEeecCceeeecCCCCcCEEeec
Confidence 468899999999999999999864335789999976431110000 000 112223333333334456789999996
Q ss_pred cccccCCCc--c------------ccc----ceEEEEecC--cccHHHHH
Q 023034 256 AAIHCWSSP--S------------TGV----GVFFQVTLI--IHVVEDLA 285 (288)
Q Consensus 256 ~vl~h~~d~--~------------~~l----G~lvi~t~~--~~~l~el~ 285 (288)
.+.. .... + ..| |.|++-.|. .....+|.
T Consensus 155 ~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll 203 (300)
T 3eld_A 155 IGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKL 203 (300)
T ss_dssp CCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHH
T ss_pred CcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHH
Confidence 6544 2221 0 111 688888888 55544443
No 307
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.31 E-value=0.0019 Score=55.23 Aligned_cols=94 Identities=16% Similarity=0.077 Sum_probs=54.1
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCC-CCE---EEEEe-cCCCCCCCCCc
Q 023034 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK-ENF---LLVRA-DISRLPFASSS 248 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~-~~i---~~~~~-d~~~lp~~~~s 248 (288)
-..++.+|||+||+.|.|+.++++.-.-..|.|.++.... . +... .+. .++ .+.++ |+.+++ ...
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~~P~--~~~~~Gv~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----EEPM--LMQSYGWNIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----CCCC--CCCSTTGGGEEEECSCCGGGSC--CCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----cCCC--cccCCCceEEEeeccCCccCCC--CCC
Confidence 3456999999999999999999987211133444433210 0 0000 000 233 44446 887753 457
Q ss_pred cceEEeccccccCCCc----cc---cc----------c-eEEEEecCc
Q 023034 249 IDAVHAGAAIHCWSSP----ST---GV----------G-VFFQVTLII 278 (288)
Q Consensus 249 fD~V~~~~vl~h~~d~----~~---~l----------G-~lvi~t~~~ 278 (288)
+|+|+|-.+-. -..+ .+ +| | .|++-.|.+
T Consensus 140 ~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 99999965432 1110 10 22 7 899999985
No 308
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.85 E-value=0.02 Score=52.46 Aligned_cols=49 Identities=10% Similarity=0.021 Sum_probs=42.7
Q ss_pred CCCCCeEEEEcCccchHHHHHH-HhCC-CCEEEEEeCCHHHHHHHHHHHHh
Q 023034 175 PVLGGNIIDASCGSGLFSRIFA-KSGL-FSLVVALDYSENMLKQCYEFVQQ 223 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~~~~~l~-~~~~-~~~v~gvD~s~~~l~~A~~~~~~ 223 (288)
..++..|+|||++.|.++..++ +.++ ..+|+++|+++...+..+++++.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4678999999999999999888 4554 36999999999999999999876
No 309
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=95.81 E-value=0.0048 Score=38.98 Aligned_cols=32 Identities=19% Similarity=0.473 Sum_probs=24.5
Q ss_pred CceeCCCCCC-CCcccCCCCCccccccCCceecCCCCccccc
Q 023034 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (288)
Q Consensus 70 ~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~ 110 (288)
..+.||.|++ +|.... ..+.+.|..||..+..
T Consensus 4 ~~~~CP~C~~~~l~~d~---------~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 4 KQKVCPACESAELIYDP---------ERGEIVCAKCGYVIEE 36 (50)
T ss_dssp SCCSCTTTSCCCEEEET---------TTTEEEESSSCCBCCC
T ss_pred ccEeCcCCCCcceEEcC---------CCCeEECcccCCcccc
Confidence 4578999999 776532 3578999999987764
No 310
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.80 E-value=0.021 Score=51.79 Aligned_cols=70 Identities=24% Similarity=0.272 Sum_probs=55.7
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC--------CCCccc
Q 023034 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------ASSSID 250 (288)
Q Consensus 179 ~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------~~~sfD 250 (288)
.++||+-||.|.++..+.+.|. ..+.++|+++..++..+.+ ..+..++.+|+.++.. ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N--------~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAIN--------FPRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHH--------CTTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHh--------CCCCceEecChhhcCHHHHHhhcccCCCee
Confidence 4799999999999999999986 3567999999998888876 3456678889887642 246799
Q ss_pred eEEeccc
Q 023034 251 AVHAGAA 257 (288)
Q Consensus 251 ~V~~~~v 257 (288)
+|+..--
T Consensus 74 ~i~ggpP 80 (376)
T 3g7u_A 74 GIIGGPP 80 (376)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9998543
No 311
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.72 E-value=0.016 Score=51.36 Aligned_cols=61 Identities=11% Similarity=0.044 Sum_probs=51.0
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhc
Q 023034 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~ 224 (288)
-|....+.+++... .++..|||.-||+|..+....+.+. +.+|+|+++..++.+++++...
T Consensus 237 kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 237 FPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 34555666666553 4689999999999999999999886 9999999999999999987665
No 312
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.58 E-value=0.0095 Score=53.36 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=54.9
Q ss_pred CCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---CCCccceEE
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAVH 253 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~sfD~V~ 253 (288)
..+|||+-||.|.+...+.+.|.. ..|+++|+++.+++..+.+. ....++.+|+.++.. +...+|+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEE
Confidence 357999999999999999998831 36899999999999998873 333467788887642 112589998
Q ss_pred eccc
Q 023034 254 AGAA 257 (288)
Q Consensus 254 ~~~v 257 (288)
...-
T Consensus 74 ~gpP 77 (343)
T 1g55_A 74 MSPP 77 (343)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8644
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.54 E-value=0.028 Score=49.81 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=49.7
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCH---HHHHHHHHHHHhc
Q 023034 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQE 224 (288)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~---~~l~~A~~~~~~~ 224 (288)
-|....+.++.... .++..|||.-||+|..+....+.+. +.+|+|+++ ..++.+++++...
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 45556677776654 4689999999999999999999886 999999999 9999999997655
No 314
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.37 E-value=0.093 Score=45.73 Aligned_cols=99 Identities=12% Similarity=0.074 Sum_probs=61.5
Q ss_pred HHHHhhcC-----CCCCCeEEEEcC------ccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEE
Q 023034 167 ELMKGYLK-----PVLGGNIIDASC------GSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLL 234 (288)
Q Consensus 167 ~~l~~~l~-----~~~~~~VLDiGc------G~G~~~~~l~~~~~~-~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~ 234 (288)
..+.+++. ...+.+|||+|+ ..|. ..+.+.++. +.|+++|+.+-. .... .+
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~--------------sda~-~~ 156 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV--------------SDAD-ST 156 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB--------------CSSS-EE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc--------------cCCC-eE
Confidence 44455543 346899999997 5566 344555664 499999998721 1123 45
Q ss_pred EEecCCCCCCCCCccceEEecccc---ccCCCccc--c--c---------------ceEEEEecCcccHHHH
Q 023034 235 VRADISRLPFASSSIDAVHAGAAI---HCWSSPST--G--V---------------GVFFQVTLIIHVVEDL 284 (288)
Q Consensus 235 ~~~d~~~lp~~~~sfD~V~~~~vl---~h~~d~~~--~--l---------------G~lvi~t~~~~~l~el 284 (288)
+++|...+.. .+.||+|++-..- -+. |.++ . | |.|++-.|......+|
T Consensus 157 IqGD~~~~~~-~~k~DLVISDMAPNtTG~~-D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L 226 (344)
T 3r24_A 157 LIGDCATVHT-ANKWDLIISDMYDPRTKHV-TKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADL 226 (344)
T ss_dssp EESCGGGEEE-SSCEEEEEECCCCTTSCSS-CSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHH
T ss_pred EEcccccccc-CCCCCEEEecCCCCcCCcc-ccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHH
Confidence 9999765433 4789999995432 122 2222 1 1 9999999876554433
No 315
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.39 E-value=0.081 Score=46.96 Aligned_cols=70 Identities=19% Similarity=0.192 Sum_probs=53.2
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC-CCccceEEecc
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-SSSIDAVHAGA 256 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~-~~sfD~V~~~~ 256 (288)
+.++||+.||.|.+...+.+.|. ..+.++|+++..++..+.+.... . .+|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~-----~-----~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK-----P-----EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC-----C-----BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC-----C-----cCCHHHcCHhhCCCCCEEEECC
Confidence 57899999999999999999886 46889999999999888875332 1 5777765321 13589999864
Q ss_pred cc
Q 023034 257 AI 258 (288)
Q Consensus 257 vl 258 (288)
--
T Consensus 80 PC 81 (327)
T 2c7p_A 80 PC 81 (327)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 316
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.38 E-value=0.01 Score=66.13 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=53.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-----CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-CCCCCcc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGL-----FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSI 249 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~-----~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~sf 249 (288)
.+..+|||||.|+|..+..+.+... ..+++..|+|+...+.|+++++.. .+....-|.... ++...+|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCce
Confidence 3467999999999986655544321 247999999999888888876543 222211233332 4456789
Q ss_pred ceEEeccccccCCCccccc----------ceEEEEe
Q 023034 250 DAVHAGAAIHCWSSPSTGV----------GVFFQVT 275 (288)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l----------G~lvi~t 275 (288)
|+|++.+++|-.++....+ |.+++..
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CEEEEECC--------------------CCEEEEEE
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999999998766666555 7776654
No 317
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.96 E-value=0.15 Score=45.31 Aligned_cols=92 Identities=12% Similarity=0.165 Sum_probs=65.5
Q ss_pred hhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcC------CC------------CCCCE
Q 023034 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NF------------PKENF 232 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~------g~------------~~~~i 232 (288)
+++...+...|+.+|||.......+...++...++-||. +.+++.-++.+...+ |. ...+.
T Consensus 91 ~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 169 (334)
T 1rjd_A 91 EFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRY 169 (334)
T ss_dssp HHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSE
T ss_pred HHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCce
Confidence 344323467899999999998888887655568888888 778777777765530 00 12678
Q ss_pred EEEEecCCCCCC---------CCCccceEEeccccccCCC
Q 023034 233 LLVRADISRLPF---------ASSSIDAVHAGAAIHCWSS 263 (288)
Q Consensus 233 ~~~~~d~~~lp~---------~~~sfD~V~~~~vl~h~~d 263 (288)
.++-+|+.+... ......++++-.++.+++.
T Consensus 170 ~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~ 209 (334)
T 1rjd_A 170 KLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHN 209 (334)
T ss_dssp EEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCH
T ss_pred EEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCH
Confidence 899999987421 2345788899999998864
No 318
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.96 E-value=0.089 Score=46.00 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC----CCccc
Q 023034 176 VLGGNIIDASCGSGLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA----SSSID 250 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~----~~sfD 250 (288)
....+++|+-||.|.+...+.+.|.... |.++|+++..++.-+.+ .....++.+|+.++... .+.+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N--------~~~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR--------HQGKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH--------TTTCEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh--------CCCCceeCCChHHccHHHhcccCCcC
Confidence 3466899999999999999999886433 69999999988777665 23445788998876421 14689
Q ss_pred eEEecc
Q 023034 251 AVHAGA 256 (288)
Q Consensus 251 ~V~~~~ 256 (288)
+++...
T Consensus 86 ll~ggp 91 (295)
T 2qrv_A 86 LVIGGS 91 (295)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999864
No 319
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.64 E-value=0.31 Score=44.22 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=53.1
Q ss_pred CCeEEEEcCccchHHHHHHHhC-------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccc
Q 023034 178 GGNIIDASCGSGLFSRIFAKSG-------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~-------~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD 250 (288)
.-.|+|+|.|+|.++..+.+.. ...+++-||+|+...+.=++++... .++.|. .++.++|- + .-
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp~--~-~~ 151 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVPE--G-PA 151 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSCC--S-SE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcCC--C-Ce
Confidence 4569999999999977665431 2248999999998877666554432 256665 34555652 2 45
Q ss_pred eEEeccccccCCC
Q 023034 251 AVHAGAAIHCWSS 263 (288)
Q Consensus 251 ~V~~~~vl~h~~d 263 (288)
+|+++.+|.-+|-
T Consensus 152 ~viANE~fDAlPv 164 (387)
T 1zkd_A 152 VILANEYFDVLPI 164 (387)
T ss_dssp EEEEESSGGGSCC
T ss_pred EEEeccccccCce
Confidence 8889998877653
No 320
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=93.45 E-value=0.055 Score=35.18 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=24.2
Q ss_pred cCCceeCCCCCC-CCcccCCCCCccccccCCceecCCCCcccc
Q 023034 68 SKNVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 68 ~l~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
.+..+.||.|+. ++... ...+.+.|..||..+.
T Consensus 8 ll~~~~Cp~C~~~~lv~D---------~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 8 ALPRVTCPNHPDAILVED---------YRAGDMICPECGLVVG 41 (58)
T ss_dssp CCSCCSBTTBSSSCCEEC---------SSSCCEECTTTCCEEC
T ss_pred ccccccCcCCCCCceeEe---------CCCCeEEeCCCCCEEe
Confidence 355678999998 55442 2457899999998764
No 321
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=93.27 E-value=0.021 Score=43.16 Aligned_cols=27 Identities=22% Similarity=0.479 Sum_probs=24.0
Q ss_pred ccCCceecCCCCcccccCCCeeeeecc
Q 023034 94 AAGSSLQCNTCKKTYSGVGTHFDMTAA 120 (288)
Q Consensus 94 i~~~~l~C~~C~~~~~~~~g~~~~~~~ 120 (288)
+.+|.+.|++||+.|++.+|+++++..
T Consensus 95 V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 95 VVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred EEEEEEECCCCCCEeeccCCcccHHHh
Confidence 567899999999999999999999753
No 322
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=93.16 E-value=0.07 Score=46.25 Aligned_cols=94 Identities=7% Similarity=-0.016 Sum_probs=68.2
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC-CC---CCCCccceEE
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP---FASSSIDAVH 253 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~-lp---~~~~sfD~V~ 253 (288)
+..+||+=+|+|.++..+.+.+ .+++.+|.++..++..+++++. ..++.++..|... +. -+...||+|+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLIF 164 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEEE
T ss_pred CCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEEE
Confidence 5568999999999999998855 4999999999999999887654 3678999999643 21 2335799999
Q ss_pred eccccccCCCccccc------------ceEEEEecCc
Q 023034 254 AGAAIHCWSSPSTGV------------GVFFQVTLII 278 (288)
Q Consensus 254 ~~~vl~h~~d~~~~l------------G~lvi~t~~~ 278 (288)
.-=-.+.-.+..+++ |.+++--+..
T Consensus 165 iDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 165 IDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp ECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred ECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 954444222222222 8888877653
No 323
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.98 E-value=0.11 Score=46.11 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=52.6
Q ss_pred CeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---CCCccceEEe
Q 023034 179 GNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAVHA 254 (288)
Q Consensus 179 ~~VLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~sfD~V~~ 254 (288)
.+++|+-||.|.+...+.+.|.. ..+.++|+++..++.-+.+. ....++.+|+.++.. +...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEEe
Confidence 47999999999999999988742 35789999999888887763 333466788877642 2235899887
Q ss_pred cc
Q 023034 255 GA 256 (288)
Q Consensus 255 ~~ 256 (288)
..
T Consensus 76 gp 77 (333)
T 4h0n_A 76 SP 77 (333)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 324
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.97 E-value=0.11 Score=46.06 Aligned_cols=71 Identities=13% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCeEEEEcCccchHHHHHHHhCCC-CEE-EEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---CCCccceE
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLF-SLV-VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAV 252 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~-~~v-~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~sfD~V 252 (288)
..+++|+-||.|.+...+.+.|.. ..+ .++|+++..++.-+.+... . ++.+|+.++.. +...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 458999999999999999998742 356 7999999998888877422 1 56788887742 22358999
Q ss_pred Eeccc
Q 023034 253 HAGAA 257 (288)
Q Consensus 253 ~~~~v 257 (288)
+...-
T Consensus 81 ~ggpP 85 (327)
T 3qv2_A 81 FMSPP 85 (327)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 87544
No 325
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=91.43 E-value=0.09 Score=33.05 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=21.1
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
.-.||.|+..+.... ..+.+.|..||..+-
T Consensus 19 ~k~CP~CG~~~fm~~---------~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 19 NKFCPRCGPGVFMAD---------HGDRWACGKCGYTEW 48 (50)
T ss_dssp SEECSSSCSSCEEEE---------CSSEEECSSSCCEEE
T ss_pred cccCCCCCCceEEec---------CCCeEECCCCCCEEE
Confidence 345999998654332 246899999987653
No 326
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=91.43 E-value=0.37 Score=42.25 Aligned_cols=67 Identities=24% Similarity=0.391 Sum_probs=51.9
Q ss_pred eEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCC-CCccceEEecc
Q 023034 180 NIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-SSSIDAVHAGA 256 (288)
Q Consensus 180 ~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~-~~sfD~V~~~~ 256 (288)
+|||+=||-|.+..-+.+.|. ..+.++|+++.+++.-+.+. .-.++.+|+.++... -..+|+++...
T Consensus 2 kvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEecC
Confidence 699999999999999998886 35679999998888777652 235678999877532 24689888754
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.42 E-value=0.83 Score=39.65 Aligned_cols=88 Identities=7% Similarity=0.026 Sum_probs=54.5
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCc
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSS 248 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~s 248 (288)
+.....++.+||-+|+|. |.++..+++. |. +|++++ +++-++.+++. ..+.+.-|..++ .+.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~-~~~~~~~~~~l----------Ga~~v~~d~~~v---~~g 199 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY--VVDLVS-ASLSQALAAKR----------GVRHLYREPSQV---TQK 199 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC--EEEEEC-SSCCHHHHHHH----------TEEEEESSGGGC---CSC
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEE-ChhhHHHHHHc----------CCCEEEcCHHHh---CCC
Confidence 555667899999999974 7777777765 44 999999 99888888764 122222232233 467
Q ss_pred cceEEeccccccCCCccccc---ceEEEE
Q 023034 249 IDAVHAGAAIHCWSSPSTGV---GVFFQV 274 (288)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l---G~lvi~ 274 (288)
+|+|+-.-.-..+....+.+ |+++..
T Consensus 200 ~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 200 YFAIFDAVNSQNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEEECC-------TTGGGEEEEEEEEEE
T ss_pred ccEEEECCCchhHHHHHHHhcCCCEEEEE
Confidence 99998755444443333344 777665
No 328
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=90.44 E-value=0.062 Score=41.45 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=24.8
Q ss_pred ccCCceecCCCCcccccCCCeeeeeccC
Q 023034 94 AAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (288)
Q Consensus 94 i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (288)
+.++.|.|+.|++.|++++|+++++.+.
T Consensus 105 v~eg~L~C~~cg~~YPI~dGIP~mL~~e 132 (141)
T 2j6a_A 105 IAEGEMKCRNCGHIYYIKNGIPNLLLPP 132 (141)
T ss_dssp EEEEEEECTTTCCEEEEETTEESSCCCS
T ss_pred ccCCEEECCCCCCcccccCCccCcCCcH
Confidence 4568899999999999999999998754
No 329
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.11 E-value=0.44 Score=44.48 Aligned_cols=73 Identities=19% Similarity=0.190 Sum_probs=51.9
Q ss_pred HHHHHHHhhcCCC------CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEe
Q 023034 164 KEFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 237 (288)
Q Consensus 164 ~~~~~l~~~l~~~------~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~ 237 (288)
.++..+..++... ..-+++|+-||.|.+..-+.+.|. ..|.++|+++..++.-+.+... .+...++.+
T Consensus 68 ~~~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~ 141 (482)
T 3me5_A 68 KEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNE 141 (482)
T ss_dssp HHHHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEES
T ss_pred HHHHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceecc
Confidence 3456666665532 245799999999999999998876 3588999999888877776321 133456778
Q ss_pred cCCCC
Q 023034 238 DISRL 242 (288)
Q Consensus 238 d~~~l 242 (288)
|+.++
T Consensus 142 DI~~i 146 (482)
T 3me5_A 142 DIRDI 146 (482)
T ss_dssp CTHHH
T ss_pred chhhh
Confidence 87654
No 330
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=90.02 E-value=0.1 Score=36.52 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=23.2
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
..+.||.|+..+... ...+.|.|+.|+..+.
T Consensus 26 ~~y~Cp~CG~~~v~r---------~atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDR---------QGTGIWQCSYCDYKFT 56 (83)
T ss_dssp SCEECSSSCCEEEEE---------EETTEEEETTTCCEEE
T ss_pred ccCcCCCCCCcceec---------cCCCeEECCCCCCEec
Confidence 357899999966543 2457999999998654
No 331
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.74 E-value=0.52 Score=43.31 Aligned_cols=79 Identities=11% Similarity=0.190 Sum_probs=53.0
Q ss_pred CCeEEEEcCccchHHHHHHHh----CC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccc-e
Q 023034 178 GGNIIDASCGSGLFSRIFAKS----GL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID-A 251 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~----~~-~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD-~ 251 (288)
...|+|+|.|+|.+..-+.+. .+ ..+++-||+|+.+.+.=++++.........++.|.. .+| ++ +. +
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~----~lP--~~-~~g~ 210 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD----ALP--ER-FEGV 210 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES----SCC--SC-EEEE
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc----cCC--cc-CceE
Confidence 468999999999987666543 21 248999999999888777777653100123677643 244 22 44 8
Q ss_pred EEeccccccCCC
Q 023034 252 VHAGAAIHCWSS 263 (288)
Q Consensus 252 V~~~~vl~h~~d 263 (288)
|+++.+|.-+|-
T Consensus 211 iiANE~fDAlPv 222 (432)
T 4f3n_A 211 VVGNEVLDAMPV 222 (432)
T ss_dssp EEEESCGGGSCC
T ss_pred EEeehhhccCce
Confidence 888888877753
No 332
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.15 E-value=0.82 Score=40.34 Aligned_cols=90 Identities=16% Similarity=0.109 Sum_probs=56.2
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccce
Q 023034 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDA 251 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~ 251 (288)
....++.+||-+|+|. |.++..+++... .+|+++|.+++-++.+++. | ... .+ .+...+ . ..+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-----G---a~~-v~-~~~~~~--~-~~~D~ 237 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM-----G---VKH-FY-TDPKQC--K-EELDF 237 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT-----T---CSE-EE-SSGGGC--C-SCEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc-----C---CCe-ec-CCHHHH--h-cCCCE
Confidence 3566799999999975 777777777632 4999999999988888763 1 111 12 332222 1 27999
Q ss_pred EEeccccc-cCCCccccc---ceEEEEec
Q 023034 252 VHAGAAIH-CWSSPSTGV---GVFFQVTL 276 (288)
Q Consensus 252 V~~~~vl~-h~~d~~~~l---G~lvi~t~ 276 (288)
|+-.-.-. .+....+.+ |++++...
T Consensus 238 vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 238 IISTIPTHYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECCCSCCCHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCcHHHHHHHHHHHhcCCEEEEECC
Confidence 98644322 222222333 77776544
No 333
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=89.13 E-value=0.04 Score=37.88 Aligned_cols=41 Identities=24% Similarity=0.631 Sum_probs=23.2
Q ss_pred CceeCCCCCCCCcccCCC----------------CCccccccCCceecCCCCccccc
Q 023034 70 NVLACPICYKPLTWIGDS----------------SLSIESAAGSSLQCNTCKKTYSG 110 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~----------------~~~~~~i~~~~l~C~~C~~~~~~ 110 (288)
++..||+||.+|.+.+.. .......++-.+.|+.||..+..
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG 63 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYG 63 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEET
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhc
Confidence 567899999976553200 00011122346789999976643
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.01 E-value=1.8 Score=38.39 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=38.5
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+|. |.++..+++... .+|+++|.+++-++.+++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHc
Confidence 455667799999999875 777777776532 4999999999988888764
No 335
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.25 E-value=2.2 Score=31.96 Aligned_cols=66 Identities=21% Similarity=0.192 Sum_probs=44.9
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCccce
Q 023034 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (288)
Q Consensus 178 ~~~VLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sfD~ 251 (288)
..+|+=+|+|. |. +...|.+.+. +|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~~----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLEDE----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHC----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 45799999974 43 3445555566 899999999887777652 4567888887532 12346788
Q ss_pred EEec
Q 023034 252 VHAG 255 (288)
Q Consensus 252 V~~~ 255 (288)
|+..
T Consensus 74 vi~~ 77 (141)
T 3llv_A 74 VLIT 77 (141)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8764
No 336
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.13 E-value=2.1 Score=37.93 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=36.1
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHH
Q 023034 173 LKPVLGGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
.+..++.+||-+|+|. |.++..+++. +. +|+++|.++.-++.+++.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~~~~~~~l 222 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRKREDAMKM 222 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHc
Confidence 4556789999999864 7777776664 54 899999999888888764
No 337
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.34 E-value=2.5 Score=31.87 Aligned_cols=66 Identities=11% Similarity=0.074 Sum_probs=45.8
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCccce
Q 023034 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (288)
Q Consensus 178 ~~~VLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sfD~ 251 (288)
..+|+=+|+|. |. +...|.+.+. .|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 45799999985 54 3445555566 89999999998887765 25667888886532 12246788
Q ss_pred EEec
Q 023034 252 VHAG 255 (288)
Q Consensus 252 V~~~ 255 (288)
|+..
T Consensus 75 vi~~ 78 (140)
T 3fwz_A 75 LILT 78 (140)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7763
No 338
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=86.07 E-value=1.8 Score=38.47 Aligned_cols=50 Identities=24% Similarity=0.283 Sum_probs=38.7
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 445566799999999986 77777777753213799999999999988764
No 339
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=86.06 E-value=0.49 Score=30.26 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=21.3
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
...||.|+..+.... ..+.+.|..|+..+.
T Consensus 18 ~~fCPkCG~~~~ma~---------~~dr~~C~kCgyt~~ 47 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAE---------HADRYSCGRCGYTEF 47 (55)
T ss_dssp SCCCTTTTTTCCCEE---------CSSEEECTTTCCCEE
T ss_pred cccCcCCCCceeEec---------cCCEEECCCCCCEEE
Confidence 567999999654321 236899999987653
No 340
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=85.28 E-value=2.7 Score=36.95 Aligned_cols=90 Identities=16% Similarity=0.221 Sum_probs=55.1
Q ss_pred cCCCCCCeEEEEcCc--cchHHHHHHHh--CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----
Q 023034 173 LKPVLGGNIIDASCG--SGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (288)
Q Consensus 173 l~~~~~~~VLDiGcG--~G~~~~~l~~~--~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (288)
....++.+||-+|+| .|.....+++. +. +|+++|.+++.++.+++. | ... .+ |..+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~~-----g---~~~-~~--~~~~~~~~~~~ 232 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKRA-----G---ADY-VI--NASMQDPLAEI 232 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHH-----T---CSE-EE--ETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHh-----C---CCE-Ee--cCCCccHHHHH
Confidence 455678999999998 45555555544 54 999999999988888653 1 111 11 222111
Q ss_pred --CCC-CccceEEeccccc-cCCCccccc---ceEEEEe
Q 023034 244 --FAS-SSIDAVHAGAAIH-CWSSPSTGV---GVFFQVT 275 (288)
Q Consensus 244 --~~~-~sfD~V~~~~vl~-h~~d~~~~l---G~lvi~t 275 (288)
... +.+|+|+....-. .+....+.+ |+++...
T Consensus 233 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 233 RRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECC
T ss_pred HHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEEC
Confidence 112 4799999765543 444444444 7776644
No 341
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=85.06 E-value=0.25 Score=31.81 Aligned_cols=39 Identities=18% Similarity=0.492 Sum_probs=21.8
Q ss_pred ceeCCCCCCC-CcccCCCCCccccccCCceecCCCCcccc
Q 023034 71 VLACPICYKP-LTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 71 ~l~CP~C~~~-l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
...||.|+.. +.....+..+.+..+.-.+.|.+|++.+.
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEec
Confidence 4679999983 22221111112223334678999998654
No 342
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=84.87 E-value=0.32 Score=34.67 Aligned_cols=28 Identities=25% Similarity=0.549 Sum_probs=21.6
Q ss_pred eeCCCCCCCCcccCCCCCccccccCCceecCCCCccccc
Q 023034 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (288)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~ 110 (288)
..||.|+.+|.+.+ +...|..|+..|..
T Consensus 33 ~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f~~ 60 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-----------GHARCRSCGEFIEM 60 (101)
T ss_dssp CBCSSSCSBEEEET-----------TEEEETTTCCEEEE
T ss_pred ccCccCCCcceecC-----------CEEECccccchhhc
Confidence 56999999998753 56779999876543
No 343
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=84.85 E-value=1.6 Score=39.23 Aligned_cols=49 Identities=18% Similarity=0.024 Sum_probs=38.3
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
......++.+||.+|+|. |.++..+++.....+|+++|.++..++.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 345567799999999986 8888777775322389999999998888865
No 344
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.73 E-value=4.5 Score=35.30 Aligned_cols=83 Identities=13% Similarity=0.055 Sum_probs=58.2
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC---------CCCCcc
Q 023034 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------FASSSI 249 (288)
Q Consensus 179 ~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp---------~~~~sf 249 (288)
..||++|||-=.....+.. ....+++-+| .+..++..++.+...+.....+..++.+|+.+ . +.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 4699999996555444431 1236899999 59999999999875422235678899999876 2 222345
Q ss_pred ceEEeccccccCCCc
Q 023034 250 DAVHAGAAIHCWSSP 264 (288)
Q Consensus 250 D~V~~~~vl~h~~d~ 264 (288)
-++++-.+++++++.
T Consensus 181 t~~i~Egvl~Yl~~~ 195 (310)
T 2uyo_A 181 TAWLAEGLLMYLPAT 195 (310)
T ss_dssp EEEEECSCGGGSCHH
T ss_pred EEEEEechHhhCCHH
Confidence 578888899999763
No 345
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=84.36 E-value=3.7 Score=35.67 Aligned_cols=95 Identities=16% Similarity=0.172 Sum_probs=57.2
Q ss_pred HHhhcCCCCCCeEEEEc-Cc-cchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC--
Q 023034 169 MKGYLKPVLGGNIIDAS-CG-SGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiG-cG-~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (288)
+.+.....++.+||-+| +| .|.....+++. |. +|+++|.+++-++.+++. | ... .+ |..+..
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~~-----G---a~~-~~--~~~~~~~~ 198 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKAL-----G---AWE-TI--DYSHEDVA 198 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH-----T---CSE-EE--ETTTSCHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc-----C---CCE-EE--eCCCccHH
Confidence 33444567799999998 33 57777766665 54 999999999998888764 1 111 12 222111
Q ss_pred ------CCCCccceEEeccccccCCCccccc---ceEEEEec
Q 023034 244 ------FASSSIDAVHAGAAIHCWSSPSTGV---GVFFQVTL 276 (288)
Q Consensus 244 ------~~~~sfD~V~~~~vl~h~~d~~~~l---G~lvi~t~ 276 (288)
.....+|+|+....-..+......+ |+++....
T Consensus 199 ~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 199 KRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCC
T ss_pred HHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEec
Confidence 1224699999765544333333333 77666543
No 346
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.26 E-value=5.7 Score=32.65 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=55.7
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----------C
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----------~ 244 (288)
++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++..|+.+.. -
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEK----GFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5678888876552 4556666676 9999999998888877776665 467889999987642 1
Q ss_pred CCCccceEEecccccc
Q 023034 245 ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h 260 (288)
..+..|+++.+..+..
T Consensus 79 ~~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 79 ENLAIDILVNNAGITR 94 (247)
T ss_dssp TTCCCSEEEECCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 1246899998876543
No 347
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.14 E-value=5.2 Score=33.81 Aligned_cols=77 Identities=29% Similarity=0.348 Sum_probs=58.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (288)
+++.+|--|.+.|. ....|++.|. +|+.+|.+++.++.+.+.++.. ..++.++.+|+.+..-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~----g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGM----GKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 37788888887774 4566667776 9999999999998888888776 4678899999976420
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 80 ~~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGIM 95 (254)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCccc
Confidence 115789999887654
No 348
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=83.98 E-value=0.55 Score=32.48 Aligned_cols=27 Identities=37% Similarity=0.992 Sum_probs=18.6
Q ss_pred eeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
..||.|+.+|.+.+ +...|..|+..|.
T Consensus 3 ~~CP~C~~~l~~~~-----------~~~~C~~C~~~~~ 29 (81)
T 2jrp_A 3 ITCPVCHHALERNG-----------DTAHCETCAKDFS 29 (81)
T ss_dssp CCCSSSCSCCEECS-----------SEEECTTTCCEEE
T ss_pred CCCCCCCCccccCC-----------CceECccccccCC
Confidence 45999998887753 3556777776554
No 349
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.73 E-value=1.7 Score=38.06 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=36.8
Q ss_pred HHHhhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Q 023034 168 LMKGYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCY 218 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~ 218 (288)
.+.+.....++.+||-+|+ |.|.....+++... .+|+++|.+++-++.+.
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~ 191 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLV 191 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH
Confidence 3335556677999999998 45777766666532 39999999998888773
No 350
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=83.40 E-value=0.55 Score=31.61 Aligned_cols=27 Identities=19% Similarity=0.517 Sum_probs=19.9
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCc
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~ 106 (288)
-.+.|+.|+....... .+..+|+.||.
T Consensus 27 v~Y~C~~CG~~~e~~~----------~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLSR----------TDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCCT----------TSTTCCSSSCC
T ss_pred EEEECCCCCCcceeCC----------CCCccCCCCCc
Confidence 4478999999754422 34679999998
No 351
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=83.28 E-value=0.53 Score=29.56 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=21.2
Q ss_pred cCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcc
Q 023034 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKT 107 (288)
Q Consensus 68 ~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~ 107 (288)
......||.|+..+. .+.+.|..||..
T Consensus 11 ~~~k~iCpkC~a~~~-------------~gaw~CrKCG~~ 37 (51)
T 3j21_g 11 IFKKYVCLRCGATNP-------------WGAKKCRKCGYK 37 (51)
T ss_dssp SSSEEECTTTCCEEC-------------TTCSSCSSSSSC
T ss_pred HhCCccCCCCCCcCC-------------CCceecCCCCCc
Confidence 457788999999743 368999999865
No 352
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=82.85 E-value=2.4 Score=37.20 Aligned_cols=49 Identities=14% Similarity=0.010 Sum_probs=37.6
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+ |.|..+..+++... .+|++++.+++-++.+++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ 203 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSV 203 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 4556677999999997 35777777776532 4999999999888888764
No 353
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=82.61 E-value=3.5 Score=34.92 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=58.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp---------- 243 (288)
.|+++|--|.+.|. ....|++.|. +|+.+|.+++.++.+.+.+... ..++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRK----GYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 47778887877764 4566677776 9999999999988888777776 457888888987632
Q ss_pred CCCCccceEEeccccccC
Q 023034 244 FASSSIDAVHAGAAIHCW 261 (288)
Q Consensus 244 ~~~~sfD~V~~~~vl~h~ 261 (288)
-.-+..|+++.+..+.+.
T Consensus 82 ~~~G~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYR 99 (255)
T ss_dssp HTTCCCCEEEECCCCCCC
T ss_pred HHCCCCcEEEECCCCCCC
Confidence 123678999998876554
No 354
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=82.36 E-value=6.6 Score=32.88 Aligned_cols=66 Identities=8% Similarity=0.122 Sum_probs=47.9
Q ss_pred CeEEEEcCccchHHHHHHH----hCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCCCCCccceEEe
Q 023034 179 GNIIDASCGSGLFSRIFAK----SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (288)
Q Consensus 179 ~~VLDiGcG~G~~~~~l~~----~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~sfD~V~~ 254 (288)
.+||=.|+ |.++..+.+ .+. +|++++-++.-...... .++.++.+|+.++. ...+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEE
Confidence 57999995 766665554 455 99999998865443332 46889999998866 567899998
Q ss_pred cccccc
Q 023034 255 GAAIHC 260 (288)
Q Consensus 255 ~~vl~h 260 (288)
......
T Consensus 70 ~a~~~~ 75 (286)
T 3ius_A 70 STAPDS 75 (286)
T ss_dssp CCCCBT
T ss_pred CCCccc
Confidence 776543
No 355
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.91 E-value=3.2 Score=32.65 Aligned_cols=66 Identities=11% Similarity=0.132 Sum_probs=43.8
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----C-CCCcc
Q 023034 178 GGNIIDASCGS-GL-FSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----F-ASSSI 249 (288)
Q Consensus 178 ~~~VLDiGcG~-G~-~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~-~~~sf 249 (288)
+.+|+=+|+|. |. +...|.+. +. +|+++|.+++.++.+++. .+..+.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~~----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRSE----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHHT----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHHC----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 56899999874 54 34555566 66 899999999887776542 3445677765421 1 23468
Q ss_pred ceEEec
Q 023034 250 DAVHAG 255 (288)
Q Consensus 250 D~V~~~ 255 (288)
|+|+..
T Consensus 107 d~vi~~ 112 (183)
T 3c85_A 107 KLVLLA 112 (183)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 888873
No 356
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=81.88 E-value=5.9 Score=33.32 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=53.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREK----GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 36788888876542 4455566676 9999999998777666655544 356888999987642 10
Q ss_pred ---CCccceEEeccccc
Q 023034 246 ---SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~ 259 (288)
++..|+++.+..+.
T Consensus 94 ~~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGVV 110 (273)
T ss_dssp HHTTSCCCEEEECCCCC
T ss_pred HHcCCCCcEEEECCCCC
Confidence 15789999887654
No 357
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=81.48 E-value=7.8 Score=33.16 Aligned_cols=82 Identities=22% Similarity=0.216 Sum_probs=59.3
Q ss_pred cCCCCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC-----
Q 023034 173 LKPVLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----- 244 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~----- 244 (288)
+....+++||=.|++.|. +...|++.|. +|+.++.++..++.+.+.+... ..++.++.+|+.+..-
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~ 99 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLA 99 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHH
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHH
Confidence 333457789999987653 4566666776 9999999999888887777665 4678899999986420
Q ss_pred C-----CCccceEEecccccc
Q 023034 245 A-----SSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 ~-----~~sfD~V~~~~vl~h 260 (288)
. .+..|+++.+..+..
T Consensus 100 ~~~~~~~g~id~lvnnAg~~~ 120 (301)
T 3tjr_A 100 DEAFRLLGGVDVVFSNAGIVV 120 (301)
T ss_dssp HHHHHHHSSCSEEEECCCCCC
T ss_pred HHHHHhCCCCCEEEECCCcCC
Confidence 0 136899998876543
No 358
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=81.45 E-value=3.5 Score=32.34 Aligned_cols=33 Identities=9% Similarity=0.111 Sum_probs=29.7
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCC
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYS 210 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s 210 (288)
.+-|||+|-|+|+.--.+.+..|+.+++.+|-.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~ 73 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERA 73 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESS
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEee
Confidence 557999999999999999999998999999853
No 359
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=81.33 E-value=5.9 Score=32.95 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=52.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSK----GFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 36788888876542 4455566676 9999999988777666655544 346888899987642 10
Q ss_pred ---CCccceEEeccccc
Q 023034 246 ---SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~ 259 (288)
.+..|+++.+..+.
T Consensus 82 ~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 82 NHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHTTTCCCEEEECCCCC
T ss_pred HHcCCCCCEEEECCCCC
Confidence 15789999877654
No 360
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.31 E-value=6.9 Score=32.25 Aligned_cols=76 Identities=21% Similarity=0.241 Sum_probs=55.7
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVAD----GGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36788888877652 4566666676 9999999999888887777665 467888999988642 0
Q ss_pred -CCCccceEEecccc
Q 023034 245 -ASSSIDAVHAGAAI 258 (288)
Q Consensus 245 -~~~sfD~V~~~~vl 258 (288)
..+..|+++.+..+
T Consensus 82 ~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 01368999987765
No 361
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.31 E-value=8.9 Score=32.00 Aligned_cols=76 Identities=21% Similarity=0.191 Sum_probs=56.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDT----GRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46789988887763 4566677776 9999999998888877777665 467889999998642 1
Q ss_pred -CCCccceEEecccc
Q 023034 245 -ASSSIDAVHAGAAI 258 (288)
Q Consensus 245 -~~~sfD~V~~~~vl 258 (288)
.-+..|+++.+...
T Consensus 84 ~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 84 KAYGRVDVVINNAFR 98 (264)
T ss_dssp HHTSCCSEEEECCCS
T ss_pred HHcCCCcEEEECCCC
Confidence 11468999987754
No 362
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=81.18 E-value=4.2 Score=35.52 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=38.6
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
......++.+||-+|+|. |.++..+++... .+|+++|.+++.++.+++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHc
Confidence 334566799999999985 888877777632 4999999999999888763
No 363
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=81.08 E-value=0.66 Score=31.32 Aligned_cols=31 Identities=19% Similarity=0.464 Sum_probs=22.3
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCC
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~ 112 (288)
++.|| |+..+...+ ......|+ ||.......
T Consensus 4 vv~C~-C~~~~~~~~---------~~kT~~C~-CG~~~~~~k 34 (71)
T 1gh9_A 4 IFRCD-CGRALYSRE---------GAKTRKCV-CGRTVNVKD 34 (71)
T ss_dssp EEEET-TSCCEEEET---------TCSEEEET-TTEEEECCS
T ss_pred EEECC-CCCEEEEcC---------CCcEEECC-CCCeeeece
Confidence 57899 999765543 34678999 998765543
No 364
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=81.08 E-value=1.9 Score=43.90 Aligned_cols=72 Identities=15% Similarity=0.200 Sum_probs=51.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCC---------------
Q 023034 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR--------------- 241 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~--------------- 241 (288)
...++||+-||.|.++.-|.+.|....+.++|+++..++.-+.+ .+...++.+|+..
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N--------~p~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN--------NPGSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH--------CTTSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh--------CCCCccccccHHHHhhhccchhhhhhhh
Confidence 34579999999999999999888523578999999988877766 2344455555321
Q ss_pred --CCCCCCccceEEeccc
Q 023034 242 --LPFASSSIDAVHAGAA 257 (288)
Q Consensus 242 --lp~~~~sfD~V~~~~v 257 (288)
+| ..+.+|+|+...-
T Consensus 611 ~~lp-~~~~vDll~GGpP 627 (1002)
T 3swr_A 611 QRLP-QKGDVEMLCGGPP 627 (1002)
T ss_dssp CBCC-CTTTCSEEEECCC
T ss_pred hhcc-cCCCeeEEEEcCC
Confidence 22 1356899988653
No 365
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.94 E-value=3.9 Score=36.02 Aligned_cols=50 Identities=24% Similarity=0.261 Sum_probs=38.4
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 334566799999999885 77877787764323899999999988888753
No 366
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=80.79 E-value=4.2 Score=36.42 Aligned_cols=49 Identities=18% Similarity=0.081 Sum_probs=38.4
Q ss_pred hcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 172 ~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l 229 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ 229 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc
Confidence 34566799999999875 88888887764323799999999999888763
No 367
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=80.54 E-value=4.8 Score=35.00 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=36.2
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+ |.|.....+++... .+|+++|.+++.++.+++.
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ 192 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEY 192 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc
Confidence 3445667999999994 35777766666532 4999999999988887763
No 368
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=80.51 E-value=7.1 Score=32.85 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=55.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-------------CHHHHHHHHHHHHhcCCCCCCCEEEEEecCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-------------SENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-------------s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~ 240 (288)
.++++|=.|++.|. +...|++.|. +|+.+|. ++..++...+.+... ..++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA----NRRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCC
Confidence 46788988887663 4566677776 9999998 666666666655554 467889999988
Q ss_pred CCC-----CC-----CCccceEEeccccccC
Q 023034 241 RLP-----FA-----SSSIDAVHAGAAIHCW 261 (288)
Q Consensus 241 ~lp-----~~-----~~sfD~V~~~~vl~h~ 261 (288)
+.. +. -+..|+++.+..+...
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~ 114 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAP 114 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 642 11 1468999988776543
No 369
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.42 E-value=10 Score=31.84 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=52.4
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CCCCc
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FASSS 248 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~~~s 248 (288)
.|+++|--|.+.|. ....|++.|. +|+..|.+.. +.+.+.+... ..++..+.+|+.+.. +..+.
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga--~Vvi~~r~~~--~~~~~~~~~~----g~~~~~~~~Dv~d~~~v~~~~~~g~ 79 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA--EVVCAARRAP--DETLDIIAKD----GGNASALLIDFADPLAAKDSFTDAG 79 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCC--HHHHHHHHHT----TCCEEEEECCTTSTTTTTTSSTTTC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC--EEEEEeCCcH--HHHHHHHHHh----CCcEEEEEccCCCHHHHHHHHHhCC
Confidence 47778877877764 4567777777 8999998753 2333334444 457888899987532 44578
Q ss_pred cceEEeccccccC
Q 023034 249 IDAVHAGAAIHCW 261 (288)
Q Consensus 249 fD~V~~~~vl~h~ 261 (288)
.|+++.+..+...
T Consensus 80 iDiLVNNAGi~~~ 92 (247)
T 4hp8_A 80 FDILVNNAGIIRR 92 (247)
T ss_dssp CCEEEECCCCCCC
T ss_pred CCEEEECCCCCCC
Confidence 9999988776543
No 370
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=80.12 E-value=1.3 Score=29.89 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=21.8
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
..+.||.|+..-... ...+.|.|..|+..+.
T Consensus 25 ~ky~C~fCgk~~vkR---------~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKR---------GAAGIWTCSCCKKTVA 55 (72)
T ss_dssp SCBCCSSCCSSCBSB---------CSSSCBCCSSSCCCCC
T ss_pred cCccCCCCCCceeEe---------cCCCeEECCCCCCEEe
Confidence 346799999853222 2357999999997654
No 371
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=79.89 E-value=8.4 Score=31.30 Aligned_cols=75 Identities=21% Similarity=0.151 Sum_probs=47.9
Q ss_pred CCCeEEEEcCccchH----HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCE-EEEEecCC-CCCCCCCccc
Q 023034 177 LGGNIIDASCGSGLF----SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF-LLVRADIS-RLPFASSSID 250 (288)
Q Consensus 177 ~~~~VLDiGcG~G~~----~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i-~~~~~d~~-~lp~~~~sfD 250 (288)
.+++||=.|+. |.+ ...|.+.+. +|++++.++..++.... .++ .++.+|+. .+.-.-+..|
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCC
Confidence 36789988853 433 445555566 99999999876554432 256 78899986 2221124689
Q ss_pred eEEeccccccCCCc
Q 023034 251 AVHAGAAIHCWSSP 264 (288)
Q Consensus 251 ~V~~~~vl~h~~d~ 264 (288)
+|+.+.......++
T Consensus 87 ~vi~~ag~~~~~~~ 100 (236)
T 3e8x_A 87 AVVFAAGSGPHTGA 100 (236)
T ss_dssp EEEECCCCCTTSCH
T ss_pred EEEECCCCCCCCCc
Confidence 99988776544333
No 372
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=79.87 E-value=0.9 Score=34.19 Aligned_cols=27 Identities=33% Similarity=0.835 Sum_probs=22.4
Q ss_pred eCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 73 ACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 73 ~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
.||.|++.....+ ...+.|+.|++.+.
T Consensus 29 ~CP~C~seytYeD----------g~l~vCPeC~hEW~ 55 (138)
T 2akl_A 29 PCPQCNSEYTYED----------GALLVCPECAHEWS 55 (138)
T ss_dssp CCTTTCCCCCEEC----------SSSEEETTTTEEEC
T ss_pred CCCCCCCcceEec----------CCeEECCccccccC
Confidence 4999999888754 56899999998774
No 373
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=79.69 E-value=4.4 Score=34.33 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=54.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.+|.++..++.+.+.+... ..++.++.+|+.+..-
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIAS----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHT----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 36788888876553 4556666676 9999999988777777666655 4678899999986531
Q ss_pred CCCccceEEeccccc
Q 023034 245 ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~ 259 (288)
..+..|+++.+..+.
T Consensus 106 ~~g~iD~lvnnAg~~ 120 (275)
T 4imr_A 106 AIAPVDILVINASAQ 120 (275)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HhCCCCEEEECCCCC
Confidence 014689999877654
No 374
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=79.68 E-value=1.7 Score=32.05 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=27.2
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCC
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g 113 (288)
.+..||.|+.-|....... -....+.|..|+..+.+.+.
T Consensus 3 ~m~FCp~Cgn~L~~~~~~~-----~~~~~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 3 NFQYCIECNNMLYPREDKV-----DRVLRLACRNCDYSEIAATS 41 (113)
T ss_dssp CCCCCSSSCCCCEECCCTT-----TCCCCEECSSSCCEECCSCS
T ss_pred cceeCcCCCCEeeEcccCC-----CCeeEEECCCCCCeEEcCCC
Confidence 3567999999887653210 01347999999998877654
No 375
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=79.65 E-value=5.3 Score=33.23 Aligned_cols=78 Identities=10% Similarity=0.117 Sum_probs=57.1
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++.+.+.+... ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAA----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 36788888887663 4566666776 9999999998888777777665 457889999987642 10
Q ss_pred -CCccceEEecccccc
Q 023034 246 -SSSIDAVHAGAAIHC 260 (288)
Q Consensus 246 -~~sfD~V~~~~vl~h 260 (288)
.+..|+++.+..+..
T Consensus 80 ~~g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANV 95 (252)
T ss_dssp HHSCEEEEEECCCCCC
T ss_pred hhCCceEEEECCCcCC
Confidence 047899998877644
No 376
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=79.47 E-value=8.2 Score=32.14 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC--
Q 023034 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (288)
..+++||=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAA----GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHH
Confidence 346788888876542 3455566676 8999999999888887777665 457889999987642 10
Q ss_pred ---CCccceEEecccc
Q 023034 246 ---SSSIDAVHAGAAI 258 (288)
Q Consensus 246 ---~~sfD~V~~~~vl 258 (288)
.+..|+++.+..+
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1468999988776
No 377
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=79.44 E-value=9.1 Score=27.97 Aligned_cols=67 Identities=21% Similarity=0.296 Sum_probs=41.5
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCccce
Q 023034 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (288)
Q Consensus 178 ~~~VLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sfD~ 251 (288)
+.+|+=+|+|. |. ++..|.+.+. +|+.+|.++..++..++. .++.++.+|..+.. .....+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCE
Confidence 45788898864 43 3344555565 899999999877655542 13456677765321 11246888
Q ss_pred EEec
Q 023034 252 VHAG 255 (288)
Q Consensus 252 V~~~ 255 (288)
|+..
T Consensus 73 vi~~ 76 (140)
T 1lss_A 73 YIAV 76 (140)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8875
No 378
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=79.10 E-value=13 Score=30.12 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=54.2
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CCC---
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FAS--- 246 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~~--- 246 (288)
++++|=.|++.|. +...|++.|. +|+.++.++.-++...+.+.... ..++.++.+|+.+.. +..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ---GVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc---CCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 4578888876552 4556666676 89999999988777766654221 467889999987642 111
Q ss_pred --CccceEEeccccccC
Q 023034 247 --SSIDAVHAGAAIHCW 261 (288)
Q Consensus 247 --~sfD~V~~~~vl~h~ 261 (288)
+..|+++.+..+.+.
T Consensus 77 ~~g~id~li~~Ag~~~~ 93 (235)
T 3l77_A 77 RFGDVDVVVANAGLGYF 93 (235)
T ss_dssp HHSSCSEEEECCCCCCC
T ss_pred hcCCCCEEEECCccccc
Confidence 368999988776543
No 379
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=78.89 E-value=3.8 Score=32.58 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=33.5
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHH-hCCCCEEEEEeCCHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGc--G~G~~~~~l~~-~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
+.....++.+||.+|+ |.|.....+++ .|. +|+++|.+++.++.+++
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSR 81 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHT
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH
Confidence 3445567899999995 45665555544 465 99999999988776654
No 380
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=78.62 E-value=0.75 Score=33.99 Aligned_cols=30 Identities=23% Similarity=0.553 Sum_probs=21.8
Q ss_pred CceeCCCCCC-CCcccCCCCCccccccCCceecCCCCcccc
Q 023034 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 70 ~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
..+.||.|+. .+.. ...+.|.|..|+..+.
T Consensus 59 akytCPfCGk~~vKR----------~avGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDR----------QGTGIWQCSYCDYKFT 89 (116)
T ss_dssp SCEECSSSCCEEEEE----------EETTEEEETTTCCEEE
T ss_pred cCCcCCCCCCceeEe----------cCceeEECCCCCCEEE
Confidence 4577999998 3333 2357999999998654
No 381
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=78.44 E-value=9.3 Score=31.73 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=56.7
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 36788888877653 4566667777 9999999998888777776665 467889999988642 10
Q ss_pred --CCccceEEecccccc
Q 023034 246 --SSSIDAVHAGAAIHC 260 (288)
Q Consensus 246 --~~sfD~V~~~~vl~h 260 (288)
-+..|+++.+..+..
T Consensus 85 ~~~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGG 101 (256)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 136899998876644
No 382
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=78.36 E-value=0.78 Score=28.65 Aligned_cols=39 Identities=21% Similarity=0.489 Sum_probs=20.9
Q ss_pred CceeCCCCCCCC-cccCCCCCccccccCCceecCCCCccc
Q 023034 70 NVLACPICYKPL-TWIGDSSLSIESAAGSSLQCNTCKKTY 108 (288)
Q Consensus 70 ~~l~CP~C~~~l-~~~~~~~~~~~~i~~~~l~C~~C~~~~ 108 (288)
....||.|+..- .....+..+.++...-.+.|.+|++.+
T Consensus 8 ~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w 47 (50)
T 1tfi_A 8 DLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 47 (50)
T ss_dssp CCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEE
T ss_pred CccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeE
Confidence 345699999842 111111122222333467899998754
No 383
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=77.91 E-value=8.4 Score=32.24 Aligned_cols=79 Identities=18% Similarity=0.197 Sum_probs=55.5
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.++.++..++.+.+.+.... ..++.++.+|+.+..-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF---GTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 36778888876653 4556666676 99999999988877776665420 3578899999987531
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+.+
T Consensus 94 ~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHTSCSEEEEECCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 0136899998776544
No 384
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=77.76 E-value=3.9 Score=37.23 Aligned_cols=66 Identities=21% Similarity=0.379 Sum_probs=45.6
Q ss_pred CCeEEEEcCcc-chH-HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCccce
Q 023034 178 GGNIIDASCGS-GLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (288)
Q Consensus 178 ~~~VLDiGcG~-G~~-~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sfD~ 251 (288)
...|+=+|+|. |.. ...|.+.+. .|+++|.++..++.+++. .+.++.+|+.+.. ..-..+|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~~----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRKF----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHHT----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHhC----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 45789998874 443 344444565 899999999999888752 4557889988642 22346788
Q ss_pred EEec
Q 023034 252 VHAG 255 (288)
Q Consensus 252 V~~~ 255 (288)
|++.
T Consensus 72 viv~ 75 (413)
T 3l9w_A 72 LINA 75 (413)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7764
No 385
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=77.13 E-value=11 Score=31.77 Aligned_cols=77 Identities=12% Similarity=0.113 Sum_probs=55.4
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~----- 244 (288)
++++|-.|++.|. +...|++.|. +|+.++.++..++.+.+.+... ..++.++.+|+.+.. +
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAA----GHDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 6789988877653 4556666776 9999999998888777776655 467889999987642 1
Q ss_pred CCCccceEEecccccc
Q 023034 245 ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 98 ~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 98 RFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHCSCCEEEECCCCCC
T ss_pred HcCCCcEEEECCCCCC
Confidence 0146899998776543
No 386
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=77.02 E-value=7.8 Score=32.21 Aligned_cols=76 Identities=24% Similarity=0.238 Sum_probs=54.4
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~----- 244 (288)
++++|=.|++.|. +...|++.|. +|+.+|.++..++.+.+.+... ..++.++.+|+.+.. +
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQF----PGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCS----TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 6678888876552 4556666676 9999999999888887776554 457889999998642 1
Q ss_pred CCCccceEEeccccc
Q 023034 245 ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~ 259 (288)
..+..|+++.+..+.
T Consensus 80 ~~g~id~lv~nAg~~ 94 (257)
T 3imf_A 80 KFGRIDILINNAAGN 94 (257)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 013689999877654
No 387
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.74 E-value=12 Score=30.99 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=57.0
Q ss_pred CCCeEEEEcC-ccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC--
Q 023034 177 LGGNIIDASC-GSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (288)
Q Consensus 177 ~~~~VLDiGc-G~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (288)
.++++|=.|+ |.|. +...|++.+. +|+.+|.++..++...+.+... ...++.++.+|+.+.. +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADL---GLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT---CSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhc---CCCceEEEEeCCCCHHHHHHHHHHH
Confidence 4678888887 5543 5566777776 9999999998888877776554 1357899999998642 10
Q ss_pred ---CCccceEEecccccc
Q 023034 246 ---SSSIDAVHAGAAIHC 260 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~h 260 (288)
.+..|+++.+..+..
T Consensus 96 ~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCCcEEEECCCcCC
Confidence 136899998877643
No 388
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=76.56 E-value=5.3 Score=35.38 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=37.5
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
+.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 444566789999999875 7777777776432389999999998888875
No 389
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=76.50 E-value=5.4 Score=35.38 Aligned_cols=50 Identities=20% Similarity=0.119 Sum_probs=38.0
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
.+.....++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3445566789999999874 7777777776432389999999998888875
No 390
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=76.40 E-value=12 Score=31.67 Aligned_cols=77 Identities=21% Similarity=0.219 Sum_probs=55.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGA----GGQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46788888877653 4456666676 9999999998888777766554 457888999987642 1
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 101 ~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 101 LKFGHLDIVVANAGIN 116 (283)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 114689999887764
No 391
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=76.29 E-value=1.3 Score=30.76 Aligned_cols=30 Identities=23% Similarity=0.584 Sum_probs=21.6
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
.+.||.|+..-... ...+.|.|..|+..+.
T Consensus 35 ky~CpfCGk~~vkR---------~a~GIW~C~kCg~~~A 64 (83)
T 3j21_i 35 KHTCPVCGRKAVKR---------ISTGIWQCQKCGATFA 64 (83)
T ss_dssp CBCCSSSCSSCEEE---------EETTEEEETTTCCEEE
T ss_pred ccCCCCCCCceeEe---------cCcCeEEcCCCCCEEe
Confidence 46799999853222 2458999999997654
No 392
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=76.11 E-value=4.4 Score=35.93 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=37.6
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
.+.....++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 3444566789999999875 7777777765321389999999998888875
No 393
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=76.08 E-value=9.9 Score=31.92 Aligned_cols=77 Identities=12% Similarity=0.111 Sum_probs=55.2
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~----- 244 (288)
++++|-.|++.|. +...|++.|. +|+.++.++..++.+.+.+... ..++.++.+|+.+.. +
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDA----GGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678888877653 4556666676 9999999998888877777665 357888889987642 0
Q ss_pred CCCccceEEecccccc
Q 023034 245 ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 78 ~~g~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 78 TWGRIDVLVNNAGVMP 93 (264)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 0146899998876643
No 394
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=76.05 E-value=0.89 Score=30.80 Aligned_cols=30 Identities=23% Similarity=0.499 Sum_probs=21.8
Q ss_pred CceeCCCCCC-CCcccCCCCCccccccCCceecCCCCcccc
Q 023034 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 70 ~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
....||.|+. .+... ..+.|.|..|+..+.
T Consensus 26 ~ky~C~fCgk~~vkR~----------a~GIW~C~~C~~~~A 56 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRA----------STSIWVCGHCGYKIA 56 (73)
T ss_pred cCccCCCCCCceeEEE----------EeEEEECCCCCcEEE
Confidence 3467999998 44432 357899999998764
No 395
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=75.66 E-value=1.5 Score=30.96 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=21.3
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
.+.||.|+..-... ...+.|.|..|+..+.
T Consensus 36 ky~CpfCgk~~vkR---------~a~GIW~C~~Cg~~~A 65 (92)
T 3iz5_m 36 KYFCEFCGKFAVKR---------KAVGIWGCKDCGKVKA 65 (92)
T ss_dssp CBCCTTTCSSCBEE---------EETTEEECSSSCCEEE
T ss_pred cccCcccCCCeeEe---------cCcceEEcCCCCCEEe
Confidence 35799999853222 2458999999987654
No 396
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=75.59 E-value=5.8 Score=35.10 Aligned_cols=50 Identities=16% Similarity=0.140 Sum_probs=37.7
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
.+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3444566789999999875 7777777776432389999999998888865
No 397
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=75.45 E-value=15 Score=30.16 Aligned_cols=76 Identities=20% Similarity=0.213 Sum_probs=51.5
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
+++||=.|++.|. +...|++.+. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRME----GHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 6788888866442 3445555666 9999999988776666555544 357889999987642 11
Q ss_pred -CCccceEEeccccc
Q 023034 246 -SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 -~~sfD~V~~~~vl~ 259 (288)
.+..|+|+.+..+.
T Consensus 87 ~~~~id~vi~~Ag~~ 101 (260)
T 3awd_A 87 QEGRVDILVACAGIC 101 (260)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 13689999876654
No 398
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=75.41 E-value=6.4 Score=34.37 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=37.2
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
...++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 456689999999875 77777777753235999999999999888764
No 399
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=75.33 E-value=7.2 Score=33.98 Aligned_cols=48 Identities=19% Similarity=0.179 Sum_probs=35.3
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
....++.+||=+|+|. |.+...+++.....+|+++|.+++-++.+++.
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc
Confidence 3556799999999986 44555555543336999999999988887764
No 400
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=75.05 E-value=15 Score=30.87 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=55.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++.+.+.+... +....++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA--SVMIVGRNPDKLAGAVQELEAL-GANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT-CCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 36788888876653 4556666776 9999999998888877777665 222237889999987642 0
Q ss_pred -CCCccceEEecccc
Q 023034 245 -ASSSIDAVHAGAAI 258 (288)
Q Consensus 245 -~~~sfD~V~~~~vl 258 (288)
..+..|+++.+..+
T Consensus 87 ~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 87 AWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 01467999987765
No 401
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=74.83 E-value=15 Score=30.61 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=53.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.+++||=.|++.|. +...|++.|. +|+++|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGL----GAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhc----CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 46788888866442 3445555666 9999999998777666666554 357889999987642 0
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+.+|+|+.+..+..
T Consensus 104 ~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 104 AEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHTCCCSEEEECCCCCC
T ss_pred HHCCCCcEEEECCCcCC
Confidence 1146899998776543
No 402
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=74.74 E-value=6.1 Score=34.67 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=39.1
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 445667799999999885 77777777764323799999999988888875
No 403
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=74.51 E-value=18 Score=30.27 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-------------CHHHHHHHHHHHHhcCCCCCCCEEEEEecC
Q 023034 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-------------SENMLKQCYEFVQQESNFPKENFLLVRADI 239 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-------------s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~ 239 (288)
..++++|-.|++.|. +...|++.|. +|+.+|. ++..++...+.+... ..++.++..|+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv 86 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQ----GRKALTRVLDV 86 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT----TCCEEEEECCT
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEEcCC
Confidence 347788988887663 4566677776 9999998 677777766666554 46788899998
Q ss_pred CCCC-----C-----CCCccceEEecccccc
Q 023034 240 SRLP-----F-----ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 240 ~~lp-----~-----~~~sfD~V~~~~vl~h 260 (288)
.+.. + .-+..|+++.+..+..
T Consensus 87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 87 RDDAALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 7642 1 0146899998876654
No 404
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=74.45 E-value=18 Score=30.45 Aligned_cols=78 Identities=18% Similarity=0.197 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC-----C
Q 023034 175 PVLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-----A 245 (288)
Q Consensus 175 ~~~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~-----~ 245 (288)
...++++|-.|++.|. +...|++.|. +|+.+|. ++..++...+.+... ..++.++.+|+.+..- .
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGL----GARVIFLRADLADLSSHQATVD 99 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHT----TCCEEEEECCTTSGGGHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHH
Confidence 3457788888877653 4566666776 9999995 776666666655554 4678899999987531 0
Q ss_pred -----CCccceEEecccc
Q 023034 246 -----SSSIDAVHAGAAI 258 (288)
Q Consensus 246 -----~~sfD~V~~~~vl 258 (288)
-+..|+++.+..+
T Consensus 100 ~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHSCCCEEEEECC-
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 1368999988766
No 405
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=74.30 E-value=5.8 Score=35.22 Aligned_cols=47 Identities=19% Similarity=0.111 Sum_probs=36.8
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
....++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l 237 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL 237 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc
Confidence 3556799999999985 77777777653 24899999999988888764
No 406
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=74.21 E-value=15 Score=31.07 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=42.0
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEe-CCHHHHHHHHHHHH-hcCCCCCCCEEEEEecCCCCC
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALD-YSENMLKQCYEFVQ-QESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD-~s~~~l~~A~~~~~-~~~g~~~~~i~~~~~d~~~lp 243 (288)
++++|-.|++.|. +...|++.|. +|+.++ .++..++.+.+.+. .. ..++.++.+|+.+..
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLNARR----PNSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHS----TTCEEEEECCCSSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHhhhc----CCeeEEEEeecCCcc
Confidence 5678877766552 4455566676 999999 99887777666654 32 357888999987654
No 407
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=74.17 E-value=2.5 Score=33.85 Aligned_cols=40 Identities=13% Similarity=0.366 Sum_probs=24.4
Q ss_pred CCceeCCCCCCCC-cccCCCCCccccccCCceecCCCCccc
Q 023034 69 KNVLACPICYKPL-TWIGDSSLSIESAAGSSLQCNTCKKTY 108 (288)
Q Consensus 69 l~~l~CP~C~~~l-~~~~~~~~~~~~i~~~~l~C~~C~~~~ 108 (288)
...+.||.|+..- .....+..+.+....-.+.|..|++.+
T Consensus 135 t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w 175 (178)
T 3po3_S 135 TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175 (178)
T ss_dssp BSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEE
T ss_pred cCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCee
Confidence 3457899999832 222222233334456688999999764
No 408
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=74.10 E-value=17 Score=29.79 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=52.9
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELTAA----GAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 5678888876552 4455666676 9999999988777766665544 357888999987642 00
Q ss_pred -CCccceEEeccccc
Q 023034 246 -SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 -~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 81 ~~g~id~lv~nAg~~ 95 (247)
T 2jah_A 81 ALGGLDILVNNAGIM 95 (247)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 14689999877654
No 409
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=74.07 E-value=19 Score=30.07 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=54.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.+ ...++.+.+.+... ..++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCC
Confidence 46789988887653 4556666776 99999987 66666666655554 4678899999886
Q ss_pred CC-----CC-----CCccceEEecccccc
Q 023034 242 LP-----FA-----SSSIDAVHAGAAIHC 260 (288)
Q Consensus 242 lp-----~~-----~~sfD~V~~~~vl~h 260 (288)
.. +. -+..|+++.+..+..
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICP 111 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCc
Confidence 42 10 136899998876644
No 410
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=74.01 E-value=19 Score=30.95 Aligned_cols=80 Identities=13% Similarity=0.210 Sum_probs=56.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.+++||=.|++.|. +...|++.|. +|++++.++.-++.+.+.+...+ ...++.++..|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEG--SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999987663 4556666676 99999999998888777766541 1237889999987642 0
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
..+..|+++.+..+..
T Consensus 83 ~~~g~id~lv~nAg~~~ 99 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNL 99 (319)
T ss_dssp HHTCCEEEEEECCCCCC
T ss_pred HhCCCCCEEEECCCcCC
Confidence 1146899998877643
No 411
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=73.74 E-value=8.4 Score=33.71 Aligned_cols=48 Identities=25% Similarity=0.223 Sum_probs=36.7
Q ss_pred hcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 172 ~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
.....++.+||-+|+|. |.++..+++... .+|+++|.+++.++.+++.
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 211 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNC 211 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHh
Confidence 34556789999999875 777777776532 3799999999988888753
No 412
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=73.66 E-value=17 Score=30.40 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=55.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
.++++|-.|++.|. +...|++.|. +|+.+|.+ +..++...+.+... ..++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 46788988876653 4566667776 99999987 66666666555554 4678999999986
Q ss_pred CC-----CC-----CCccceEEeccccccC
Q 023034 242 LP-----FA-----SSSIDAVHAGAAIHCW 261 (288)
Q Consensus 242 lp-----~~-----~~sfD~V~~~~vl~h~ 261 (288)
.. +. -+..|+++.+..+...
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 42 11 1468999988776543
No 413
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=73.66 E-value=17 Score=30.54 Aligned_cols=79 Identities=16% Similarity=0.216 Sum_probs=55.1
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC----------------HHHHHHHHHHHHhcCCCCCCCEEEEEe
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS----------------ENMLKQCYEFVQQESNFPKENFLLVRA 237 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s----------------~~~l~~A~~~~~~~~g~~~~~i~~~~~ 237 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.+ ++.++...+.+... ..++.++..
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 83 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH----NRRIVTAEV 83 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT----TCCEEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc----CCceEEEEc
Confidence 46789988887763 4566677776 99999987 66666665555554 467889999
Q ss_pred cCCCCC-----C-----CCCccceEEeccccccC
Q 023034 238 DISRLP-----F-----ASSSIDAVHAGAAIHCW 261 (288)
Q Consensus 238 d~~~lp-----~-----~~~sfD~V~~~~vl~h~ 261 (288)
|+.+.. + .-+..|+++.+..+...
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 117 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNG 117 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCC
Confidence 987642 0 01468999988776443
No 414
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=73.54 E-value=5.6 Score=35.20 Aligned_cols=51 Identities=20% Similarity=0.146 Sum_probs=38.0
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
.+.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++.
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 3444566789999999875 77777777653213799999999988888764
No 415
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=73.47 E-value=1.8 Score=30.63 Aligned_cols=30 Identities=30% Similarity=0.524 Sum_probs=21.2
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
.+.||.|+..-... ...+.|.|..|+..+.
T Consensus 36 ky~CpfCgk~~vkR---------~a~GIW~C~~C~~~~A 65 (92)
T 3izc_m 36 RYDCSFCGKKTVKR---------GAAGIWTCSCCKKTVA 65 (92)
T ss_dssp CCCCSSSCSSCCEE---------EETTEEECTTTCCEEE
T ss_pred CCcCCCCCCceeee---------cccceEEcCCCCCEEe
Confidence 46699999843221 2357999999987654
No 416
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=73.45 E-value=4 Score=36.33 Aligned_cols=51 Identities=20% Similarity=0.137 Sum_probs=38.5
Q ss_pred HHhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 169 MKGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 169 l~~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
+.+.....++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 33445667799999999974 7777777776322379999999998888875
No 417
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=73.37 E-value=2.1 Score=35.18 Aligned_cols=38 Identities=29% Similarity=0.589 Sum_probs=24.4
Q ss_pred ceeCCCCCCCCcccCCCCCccccccCCceecCCCCccc
Q 023034 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (288)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 108 (288)
.+.||.|+......+........+....+.|++|+...
T Consensus 22 ~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 22 ELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp EEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred EEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 37899999855544432221222566789999998754
No 418
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=73.35 E-value=17 Score=30.87 Aligned_cols=78 Identities=18% Similarity=0.237 Sum_probs=54.7
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
.++++|-.|++.|. +...|++.|. +|+.+|.+ +..++.+.+.+... ..++.++.+|+.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhc----CCceEEEECCCCC
Confidence 47789988887663 4566677776 99999987 66666666655554 4678899999986
Q ss_pred CC-----C-----CCCccceEEecccccc
Q 023034 242 LP-----F-----ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 242 lp-----~-----~~~sfD~V~~~~vl~h 260 (288)
.. + .-+..|+++.+..+..
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 129 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALAS 129 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 42 1 1146899998776543
No 419
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=72.99 E-value=14 Score=31.09 Aligned_cols=78 Identities=13% Similarity=0.208 Sum_probs=55.5
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCC-C----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~l-p----~---- 244 (288)
.+++||=.|++.|. +...|++.|. +|+.++.++.-++.+.+.+...+ ..++.++.+|+.+. . +
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN---HENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT---CCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEccCCCcHHHHHHHHHHH
Confidence 36678888876552 4555666676 99999999988877777766551 35789999999875 2 0
Q ss_pred --CCCccceEEeccccc
Q 023034 245 --ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 --~~~sfD~V~~~~vl~ 259 (288)
..+..|+++.+..+.
T Consensus 86 ~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 86 KTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHSSCCEEEECCCCC
T ss_pred HHhCCCCCEEEECCccc
Confidence 014689999887754
No 420
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=72.64 E-value=9.4 Score=33.04 Aligned_cols=47 Identities=17% Similarity=0.089 Sum_probs=35.0
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGc--G~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~ 219 (288)
+.....++.+||-.|+ |.|.....+++. |. +|+++|.+++.++.+++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh
Confidence 4445667899999998 456666555554 54 99999999988887743
No 421
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=72.56 E-value=19 Score=30.23 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=52.7
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREA----GVEADGRTCDVRSVPEIEALVAAVV 94 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 36788888876552 4455566676 9999999998777666655544 346888899987632 1
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 95 ~~~g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 95 ERYGPVDVLVNNAGRP 110 (277)
T ss_dssp HHTCSCSEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 114689999877654
No 422
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=72.38 E-value=10 Score=31.97 Aligned_cols=79 Identities=16% Similarity=0.225 Sum_probs=56.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA--QVAVAARHSDALQVVADEIAGV----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 46788888877653 4556666776 9999999988877777766655 357888999988642 10
Q ss_pred --CCccceEEeccccccC
Q 023034 246 --SSSIDAVHAGAAIHCW 261 (288)
Q Consensus 246 --~~sfD~V~~~~vl~h~ 261 (288)
-+..|+++.+..+...
T Consensus 105 ~~~g~iD~lvnnAg~~~~ 122 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSV 122 (276)
T ss_dssp HHHSCCSEEEECCCCCCC
T ss_pred HHcCCCCEEEECCCCCCC
Confidence 1368999988776543
No 423
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=72.17 E-value=19 Score=29.79 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=52.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREK----GVEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT----TSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 36788888876553 4455666676 9999999988777666655544 346888899987642 00
Q ss_pred --CCccceEEeccccc
Q 023034 246 --SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 --~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 80 ~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 80 RDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 13689999877654
No 424
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=71.97 E-value=5.4 Score=34.82 Aligned_cols=96 Identities=14% Similarity=0.201 Sum_probs=58.6
Q ss_pred HHHhhcCCCCCCeEEEEcCc--cchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-
Q 023034 168 LMKGYLKPVLGGNIIDASCG--SGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP- 243 (288)
Q Consensus 168 ~l~~~l~~~~~~~VLDiGcG--~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp- 243 (288)
.+.+.....++.+||-+|+| .|..+..+++. |. +|+++|.++..++.+++. | ... .+ |.....
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~l-----g---a~~-~~--~~~~~~~ 201 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF--RLIAVTRNNKHTEELLRL-----G---AAY-VI--DTSTAPL 201 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHH-----T---CSE-EE--ETTTSCH
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHhC-----C---CcE-EE--eCCcccH
Confidence 34455566789999999987 57776666664 54 999999999888888764 1 111 11 222111
Q ss_pred -------CCCCccceEEeccccccCCCccccc---ceEEEEec
Q 023034 244 -------FASSSIDAVHAGAAIHCWSSPSTGV---GVFFQVTL 276 (288)
Q Consensus 244 -------~~~~sfD~V~~~~vl~h~~d~~~~l---G~lvi~t~ 276 (288)
.....+|+|+....-.........+ |+++....
T Consensus 202 ~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 202 YETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEee
Confidence 1224699999765443332222334 77766543
No 425
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=71.93 E-value=20 Score=29.48 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=56.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.++.++..++.+.+.+... +....++.++.+|+.+.. +
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRS-NKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHH-CTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHh-ccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 36788888887653 5566677777 9999999998888777766554 111256788999988642 1
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 83 ~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHCCEEEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 114689999887764
No 426
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=71.90 E-value=9.2 Score=33.64 Aligned_cols=47 Identities=23% Similarity=0.176 Sum_probs=35.2
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 173 l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
....++.+||-+|+|. |.++..+++...+.+|+++|.+++-++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 4556789999999863 6666666664312499999999998888875
No 427
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=71.78 E-value=16 Score=30.43 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=53.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-CCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-ASS 247 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~~ 247 (288)
.++++|-.|++.|. +...|++.|. +|+.+|.++..++...+.+.... ....+.++.+|+.+.. + .-+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQY--PDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHC--TTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC--CCceEEEEecCCCCHHHHHHHHHhcC
Confidence 36778888876552 4556666676 99999999988877766665541 1345778888887532 0 124
Q ss_pred ccceEEecccccc
Q 023034 248 SIDAVHAGAAIHC 260 (288)
Q Consensus 248 sfD~V~~~~vl~h 260 (288)
..|+++.+..+.+
T Consensus 85 ~id~lv~nAg~~~ 97 (267)
T 3t4x_A 85 KVDILINNLGIFE 97 (267)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998776544
No 428
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=71.65 E-value=13 Score=32.60 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=30.6
Q ss_pred CCeEEEEcCcc-chHHHHHHHh-CCCCEEEEEeCCH---HHHHHHHHH
Q 023034 178 GGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSE---NMLKQCYEF 220 (288)
Q Consensus 178 ~~~VLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~---~~l~~A~~~ 220 (288)
+.+||-+|+|. |.++..+++. |. +|+++|.++ +-++.+++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~ 226 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET 226 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh
Confidence 88999999853 5555555554 54 999999998 777777653
No 429
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=70.61 E-value=16 Score=30.29 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=55.4
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (288)
.++++|=.|.+.|. +...|++.|. +|+.+|.++..++.+.+.+...+ ..++.++.+|+.+..-
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLDQLG---SGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTS---SSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC---CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46778888876552 4455666676 99999999988887777766541 2578899999976420
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 84 ~~~g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFP 100 (262)
T ss_dssp HHHSCCSEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 0136899998776543
No 430
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=70.43 E-value=20 Score=31.02 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=41.6
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEe-CCHHHHHHHHHHHH-hcCCCCCCCEEEEEecCCCCC
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALD-YSENMLKQCYEFVQ-QESNFPKENFLLVRADISRLP 243 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD-~s~~~l~~A~~~~~-~~~g~~~~~i~~~~~d~~~lp 243 (288)
++++|-.|++.|. +...|++.|. +|+.++ .++..++.+.+.+. .. ..++.++.+|+.+..
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~G~--~Vv~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLNARR----PNSAITVQADLSNVA 110 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHS----TTCEEEEECCCSSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhc----CCeEEEEEeeCCCch
Confidence 5678877766542 3445556676 999999 99887777666654 22 357888999987654
No 431
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=70.27 E-value=15 Score=30.85 Aligned_cols=78 Identities=12% Similarity=0.049 Sum_probs=54.4
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++..|+.+.. +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA--MVIGTATTEAGAEGIGAAFKQA----GLEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHH----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 36678877766553 4456666676 9999999998888777766665 356778888987642 1
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 101 ~~~g~iD~lvnnAg~~~ 117 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQ 117 (270)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 0136899998776543
No 432
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=70.05 E-value=9.2 Score=33.60 Aligned_cols=50 Identities=26% Similarity=0.272 Sum_probs=38.5
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+|. |.++..+++......|+++|.+++-++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 344566789999999875 77777777763212499999999999999875
No 433
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=69.76 E-value=16 Score=30.16 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=50.2
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKAGA--TVYITGRHLDTLRVVAQEAQSL----GGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH----SSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHc----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 5677877766542 3455566676 9999999988777666665554 346888999987642 10
Q ss_pred --CCccceEEecc
Q 023034 246 --SSSIDAVHAGA 256 (288)
Q Consensus 246 --~~sfD~V~~~~ 256 (288)
.+..|+++.+.
T Consensus 79 ~~~g~id~lvnnA 91 (260)
T 2qq5_A 79 EQQGRLDVLVNNA 91 (260)
T ss_dssp HHTTCCCEEEECC
T ss_pred hcCCCceEEEECC
Confidence 35689999877
No 434
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=69.75 E-value=11 Score=33.36 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=38.9
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 444566799999999875 77777777764323899999999998888875
No 435
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=69.51 E-value=9 Score=32.44 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=54.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA--KVVVTARNGNALAELTDEIAGG----GGEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHTTT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 36778888877653 4556666776 9999999998887777766554 467888888987642 0
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 81 ~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 81 RRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 014689999877654
No 436
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=69.32 E-value=2.3 Score=33.87 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=23.5
Q ss_pred cCCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcc
Q 023034 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKT 107 (288)
Q Consensus 68 ~l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~ 107 (288)
..-..+||.|...+... ..+.++|+.|+..
T Consensus 39 ~~~Y~ACp~CnKKV~~~----------~~g~~~CekC~~~ 68 (172)
T 3u50_C 39 KLYYYRCTCQGKSVLKY----------HGDSFFCESCQQF 68 (172)
T ss_dssp CCEEEECTTSCCCEEEE----------TTTEEEETTTTEE
T ss_pred cEEehhchhhCCEeeeC----------CCCeEECCCCCCC
Confidence 44567899999988742 2478999999998
No 437
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=69.24 E-value=1.5 Score=31.68 Aligned_cols=31 Identities=32% Similarity=0.553 Sum_probs=21.5
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
..+.||.|+..-... ...+.|.|..|+..+.
T Consensus 35 aky~CpfCgk~~vKR---------~a~GIW~C~kCg~~~A 65 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKR---------AAVGIWKCKPCKKIIA 65 (103)
T ss_dssp SCEECTTTCCEEEEE---------EETTEEEETTTTEEEE
T ss_pred cCCCCCCCCCceeee---------cCcceEEcCCCCCEEe
Confidence 346799999842221 2357999999987654
No 438
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=69.23 E-value=2.1 Score=31.99 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=26.6
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCC
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g 113 (288)
.+..||.|+.-|....+. ......+.|..|+..+.+...
T Consensus 3 ~~~FCp~CgnlL~~~~~~-----~~~~~~~~C~~C~y~~~~~~~ 41 (122)
T 1twf_I 3 TFRFCRDCNNMLYPREDK-----ENNRLLFECRTCSYVEEAGSP 41 (122)
T ss_dssp CCCBCSSSCCBCEEEEET-----TTTEEEEECSSSSCEEECSCS
T ss_pred CCCcccccCccCcccccC-----cCCCCEEECCcCCCeeecCcc
Confidence 467899999977654210 011357899999998876643
No 439
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=69.17 E-value=21 Score=29.10 Aligned_cols=76 Identities=21% Similarity=0.333 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-CC
Q 023034 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-AS 246 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~ 246 (288)
.++++||=.|++.|. +...|++.|. +|+.++.++..++...+.+ ..++.+..+|+.+.. + ..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhc
Confidence 457789988876653 4456666676 9999999998777665543 346788888887532 1 12
Q ss_pred CccceEEecccccc
Q 023034 247 SSIDAVHAGAAIHC 260 (288)
Q Consensus 247 ~sfD~V~~~~vl~h 260 (288)
+..|+++.+..+..
T Consensus 83 ~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 83 SNLDILVCNAGITS 96 (249)
T ss_dssp SCCSEEEECCC---
T ss_pred CCCCEEEECCCCCC
Confidence 46899998776543
No 440
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=69.03 E-value=21 Score=30.24 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=52.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGA--TIVFNDINQELVDRGMAAYKAA----GINAHGYVCDVTDEDGIQAMVAQIE 106 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 36788888876542 3445566676 9999999988777666655544 346788889987642 1
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 107 ~~~g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 107 SEVGIIDILVNNAGII 122 (291)
T ss_dssp HHTCCCCEEEECCCCC
T ss_pred HHcCCCcEEEECCCcC
Confidence 114689999877654
No 441
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=68.94 E-value=9.9 Score=31.98 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=55.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA--RILINGTDPSRVAQTVQEFRNV----GHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 46788888876553 4556666676 9999999998888777776665 457888888987642 0
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
..+..|+++.+..+..
T Consensus 99 ~~~g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQF 115 (271)
T ss_dssp HHTCCCCEEEECCCCCC
T ss_pred HHCCCCCEEEECCCCCC
Confidence 1146899998877654
No 442
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=68.74 E-value=12 Score=32.58 Aligned_cols=47 Identities=21% Similarity=0.174 Sum_probs=35.7
Q ss_pred cCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 173 LKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 173 l~~~~~~~VLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
....++.+||-+|+ |.|.....+++... .+|+++|.+++.++.+++.
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~ 210 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL 210 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc
Confidence 35567899999998 46777766666532 3999999999988888653
No 443
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=68.63 E-value=14 Score=32.09 Aligned_cols=51 Identities=24% Similarity=0.167 Sum_probs=37.5
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 170 ~~~l~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
.......++.+||-+|+|. |.++..+++......++++|.+++-++.+++.
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 3444556799999999985 55666666664335789999999988888764
No 444
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=68.57 E-value=4.6 Score=29.66 Aligned_cols=38 Identities=16% Similarity=0.324 Sum_probs=23.1
Q ss_pred eeCCCCCCCC-cccCCCCCccccccCCceecCCCCcccc
Q 023034 72 LACPICYKPL-TWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 72 l~CP~C~~~l-~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
..||.|+..- .....+..+.+....-.+.|.+|++.+.
T Consensus 73 ~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 73 KECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp SCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred cCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 7799999842 2222222233334556788999997653
No 445
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=68.46 E-value=28 Score=28.85 Aligned_cols=80 Identities=11% Similarity=0.074 Sum_probs=56.0
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++.+.+.+.... ...++.++.+|+.+.. +
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRF--PGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHS--TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 36788888887653 4566666776 99999999988887777766521 1345888999987642 0
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 83 ~~~g~id~lvnnAg~~~ 99 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGR 99 (265)
T ss_dssp HHHCSCSEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 1146899998877643
No 446
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=68.26 E-value=2.5 Score=35.30 Aligned_cols=35 Identities=23% Similarity=0.578 Sum_probs=23.3
Q ss_pred CceeCCCCCC-CCcccCCCCCccccccCCceecCCCCccccc
Q 023034 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (288)
Q Consensus 70 ~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~ 110 (288)
.-..||.||. +|..... .-+-..+.|++|+..|-.
T Consensus 33 ~n~yCPnCG~~~l~~f~n------N~PVaDF~C~~C~EeyEL 68 (257)
T 4esj_A 33 RQSYCPNCGNNPLNHFEN------NRPVADFYCNHCSEEFEL 68 (257)
T ss_dssp HHCCCTTTCCSSCEEC----------CCCEEECTTTCCEEEE
T ss_pred HCCcCCCCCChhhhhccC------CCcccccccCCcchhhee
Confidence 3456999999 6755432 234567999999987754
No 447
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=68.23 E-value=3.3 Score=25.25 Aligned_cols=36 Identities=14% Similarity=0.327 Sum_probs=19.3
Q ss_pred CCceeCCCCCCCCccc-CCCCCccccccCCceecCCCCc
Q 023034 69 KNVLACPICYKPLTWI-GDSSLSIESAAGSSLQCNTCKK 106 (288)
Q Consensus 69 l~~l~CP~C~~~l~~~-~~~~~~~~~i~~~~l~C~~C~~ 106 (288)
+..++|++|+.-.... +++ ...+. ....+.|+.|+.
T Consensus 2 m~~y~C~vCGyvyd~~~Gd~-t~f~~-lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 2 MQKYVCNVCGYEYDPAEHDN-VPFDQ-LPDDWCCPVCGV 38 (46)
T ss_dssp CCCEEETTTCCEECGGGGTT-CCGGG-SCTTCBCTTTCC
T ss_pred CCEEECCCCCeEEeCCcCCC-cchhh-CCCCCcCcCCCC
Confidence 3467899999733221 100 00111 234589999986
No 448
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=68.23 E-value=12 Score=33.28 Aligned_cols=48 Identities=27% Similarity=0.290 Sum_probs=36.7
Q ss_pred hcC-CCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 172 YLK-PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 172 ~l~-~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
... ..++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 345 56789999999774 7777777765321499999999998888875
No 449
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=67.81 E-value=25 Score=30.18 Aligned_cols=78 Identities=21% Similarity=0.288 Sum_probs=53.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.+ +..++...+.+... ..++.++.+|+.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d 118 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ----GRRIIARQADVRD 118 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCCC
Confidence 46788888877653 4566666776 99999986 56666555555544 4678899999876
Q ss_pred CC-----CC-----CCccceEEecccccc
Q 023034 242 LP-----FA-----SSSIDAVHAGAAIHC 260 (288)
Q Consensus 242 lp-----~~-----~~sfD~V~~~~vl~h 260 (288)
.. +. -+..|+++.+..+..
T Consensus 119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 119 LASLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 42 10 146899998876543
No 450
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=67.59 E-value=24 Score=29.10 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=50.8
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGA--HVVVSSRKQENVDRTVATLQGE----GLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 6678877765542 3445566676 9999999988776666555544 356888889987532 10
Q ss_pred -CCccceEEeccccc
Q 023034 246 -SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 -~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 88 ~~g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 88 LHGGVDILVSNAAVN 102 (260)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 13689999876653
No 451
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=67.59 E-value=5.9 Score=36.52 Aligned_cols=66 Identities=15% Similarity=0.114 Sum_probs=44.3
Q ss_pred CCeEEEEcCccchHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCccce
Q 023034 178 GGNIIDASCGSGLFSRIFAKSG--LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~--~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sfD~ 251 (288)
..+|+=+|||. .+..+++.. .+-.|+.+|.+++.++.+.+. ..+..+.||+.+.. ..-...|+
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---------~~~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDK---------YDLRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---------SSCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---------cCcEEEEEcCCCHHHHHhcCCCcCCE
Confidence 45677777763 444444432 123899999999999887764 35678899988643 12356788
Q ss_pred EEe
Q 023034 252 VHA 254 (288)
Q Consensus 252 V~~ 254 (288)
+++
T Consensus 72 ~ia 74 (461)
T 4g65_A 72 LVA 74 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 452
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=67.57 E-value=27 Score=28.67 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=51.0
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~----- 244 (288)
++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQA----GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567877866542 4455566676 9999999988777666555544 346888899987642 1
Q ss_pred CCCccceEEeccccc
Q 023034 245 ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 ~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 76 ~~g~id~lv~nAg~~ 90 (256)
T 1geg_A 76 TLGGFDVIVNNAGVA 90 (256)
T ss_dssp HTTCCCEEEECCCCC
T ss_pred HhCCCCEEEECCCCC
Confidence 014689999877653
No 453
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=67.41 E-value=20 Score=29.19 Aligned_cols=75 Identities=21% Similarity=0.221 Sum_probs=49.4
Q ss_pred CCeEEEEcCccchHHH----HHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 178 GGNIIDASCGSGLFSR----IFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~----~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
+++||=.|++ |.++. .|++.+. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 11 ~~~vlVtGas-ggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 11 GKCAIITGAG-AGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQL----GGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCc-cHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 5678877754 44444 4444565 9999999988776666555544 356888899987632 10
Q ss_pred --CCccceEEeccccc
Q 023034 246 --SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 --~~sfD~V~~~~vl~ 259 (288)
.+.+|+|+.+....
T Consensus 84 ~~~~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGG 99 (255)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCCC
Confidence 13689998876654
No 454
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=67.27 E-value=22 Score=29.55 Aligned_cols=78 Identities=12% Similarity=0.170 Sum_probs=53.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~--- 244 (288)
.+++||=.|++.|. +...|++.|. +|+.++. ++...+...+.++.. ..++.++.+|+.+.. +
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGL--KVWINYRSNAEVADALKNELEEK----GYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHH
Confidence 46788888877653 4556666676 8999998 566666666655554 467889999987642 1
Q ss_pred --CCCccceEEecccccc
Q 023034 245 --ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 --~~~sfD~V~~~~vl~h 260 (288)
..+..|+++.+..+..
T Consensus 102 ~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCcCC
Confidence 1146899998776543
No 455
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=67.19 E-value=22 Score=29.53 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=56.4
Q ss_pred CCCeEEEEcCc----cch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C--
Q 023034 177 LGGNIIDASCG----SGL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (288)
Q Consensus 177 ~~~~VLDiGcG----~G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-- 244 (288)
.++++|--|++ -|. ....|++.|. +|+.+|.++..++.+.+.+++.+ ..++.++..|+.+.. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN---QPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT---CSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCcEEEEEccCCCHHHHHHHHHH
Confidence 47888988853 343 5667777887 99999999988888877776652 357888899987632 0
Q ss_pred ---CCCccceEEeccccc
Q 023034 245 ---ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 ---~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 80 ~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHHHCCCSEEEECCCCC
T ss_pred HHHHhCCCCEEEeccccc
Confidence 125789998876654
No 456
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=67.10 E-value=14 Score=33.01 Aligned_cols=47 Identities=23% Similarity=0.131 Sum_probs=37.4
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
...++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 456789999999875 77777777764324899999999999988775
No 457
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=67.09 E-value=21 Score=29.91 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=52.4
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... +....++.++.+|+.+.. +.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKS-GVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT-TCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHc-CCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 5678877766542 4455566676 9999999998777766655543 111126888999987642 11
Q ss_pred -CCccceEEecccccc
Q 023034 246 -SSSIDAVHAGAAIHC 260 (288)
Q Consensus 246 -~~sfD~V~~~~vl~h 260 (288)
-+..|+++.+..+..
T Consensus 83 ~~g~iD~lv~nAg~~~ 98 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAI 98 (280)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred hcCCCCEEEECCCCCC
Confidence 136899998776543
No 458
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=66.87 E-value=34 Score=28.50 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=53.5
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCEEEEEecCCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~ 241 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.+ ...++...+.+... ..++.++.+|+.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~ 82 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA--DIAICDRCENSDVVGYPLATADDLAETVALVEKT----GRRCISAKVDVKD 82 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCccccccccccccHHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 46789988887653 4556666776 89999986 55555555555544 4678899999876
Q ss_pred CC-----CC-----CCccceEEecccccc
Q 023034 242 LP-----FA-----SSSIDAVHAGAAIHC 260 (288)
Q Consensus 242 lp-----~~-----~~sfD~V~~~~vl~h 260 (288)
.. +. -+..|+++.+..+..
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 42 10 136899998877654
No 459
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=66.68 E-value=36 Score=27.37 Aligned_cols=73 Identities=19% Similarity=0.193 Sum_probs=46.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-CCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-ASS 247 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~~ 247 (288)
.+++||=.|++.|. +...|++.|. +|++++.++..++...+. ..++.++.+|+.+.. + ..+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSLAKE--------CPGIEPVCVDLGDWDATEKALGGIG 75 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------STTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHh--------ccCCCcEEecCCCHHHHHHHHHHcC
Confidence 36688888865432 3445555666 999999998765544332 234567788887532 1 124
Q ss_pred ccceEEeccccc
Q 023034 248 SIDAVHAGAAIH 259 (288)
Q Consensus 248 sfD~V~~~~vl~ 259 (288)
..|+|+.+..+.
T Consensus 76 ~id~vi~~Ag~~ 87 (244)
T 1cyd_A 76 PVDLLVNNAALV 87 (244)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 689999877654
No 460
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=66.46 E-value=11 Score=32.97 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcC--ccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHH
Q 023034 174 KPVLGGNIIDASC--GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 174 ~~~~~~~VLDiGc--G~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~ 219 (288)
...++.+||-+|+ |.|.....+++. +. +|+++|.++..++.+++
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga--~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY--RVLGIDGGEGKEELFRS 212 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSTTHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC--cEEEEcCCHHHHHHHHH
Confidence 5567899999998 467766666654 54 99999999888777765
No 461
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=66.25 E-value=12 Score=32.47 Aligned_cols=48 Identities=17% Similarity=0.072 Sum_probs=35.9
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
+.....++.+||-+|+ |.|.....+++... .+|+++|.++..++.+++
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH
Confidence 4455667899999997 46777766666432 499999999988887764
No 462
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=65.72 E-value=9.6 Score=33.63 Aligned_cols=43 Identities=14% Similarity=0.047 Sum_probs=34.5
Q ss_pred CCCeEEEEc-Cc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 177 LGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 177 ~~~~VLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
++.+||-+| +| .|.++..+++.....+|+++|.+++-++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 688999998 55 48888888886222599999999998888876
No 463
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.64 E-value=14 Score=29.73 Aligned_cols=65 Identities=14% Similarity=0.066 Sum_probs=42.3
Q ss_pred eEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCccceEE
Q 023034 180 NIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDAVH 253 (288)
Q Consensus 180 ~VLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sfD~V~ 253 (288)
+|+=+|+|. |. ++..|.+.+. .|+.+|.+++.++...+. .++.++.+|+.+.. ..-..+|+|+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~l~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY--GVVIINKDRELCEEFAKK---------LKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHH---------SSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHH---------cCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 577788764 33 3444455565 899999999887765442 24568889987532 1224678888
Q ss_pred ec
Q 023034 254 AG 255 (288)
Q Consensus 254 ~~ 255 (288)
+.
T Consensus 71 ~~ 72 (218)
T 3l4b_C 71 IL 72 (218)
T ss_dssp EC
T ss_pred Ee
Confidence 74
No 464
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=65.43 E-value=32 Score=28.58 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=51.4
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HhcCCCCCCCEEEEEecCCCCC-----CC--
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFV-QQESNFPKENFLLVRADISRLP-----FA-- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~-~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+ ... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY----GVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 46788888876542 4455666676 9999999988776665554 333 246788889987632 10
Q ss_pred ---CCccceEEeccccc
Q 023034 246 ---SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 94 ~~~~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 13689999876654
No 465
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=65.36 E-value=26 Score=29.00 Aligned_cols=77 Identities=17% Similarity=0.189 Sum_probs=52.9
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEE-eCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gv-D~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
++++|=.|++.|. +...|++.|. +|+.+ +.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKL----GVKVLVVKANVGQPAKIKEMFQQID 77 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 5678877876552 4455666676 88886 88888777777766654 457889999988642 0
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 78 ~~~g~id~lv~nAg~~~ 94 (258)
T 3oid_A 78 ETFGRLDVFVNNAASGV 94 (258)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 0146799998876543
No 466
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=65.23 E-value=16 Score=31.72 Aligned_cols=45 Identities=24% Similarity=0.180 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 023034 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~ 219 (288)
...++.+||-+|+|. |.++..+++... .+|+++|.++..++.+++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH
Confidence 556789999999863 676666666532 499999999998888865
No 467
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=65.15 E-value=5.1 Score=26.18 Aligned_cols=30 Identities=20% Similarity=0.385 Sum_probs=21.7
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccc
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 109 (288)
-.+.|..|+...... ....++|+.||..-.
T Consensus 20 v~Y~C~~Cg~~~~l~----------~~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ----------AKEVIRCRECGHRVM 49 (63)
T ss_dssp CCCBCSSSCCBCCCC----------SSSCCCCSSSCCCCC
T ss_pred eEEECCCCCCeeecC----------CCCceECCCCCcEEE
Confidence 457899999866543 235799999987543
No 468
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=65.12 E-value=25 Score=29.27 Aligned_cols=78 Identities=17% Similarity=0.168 Sum_probs=53.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~--- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.++. ++..++...+.+... ..++.++.+|+.+.. +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAA----GGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 36778888876553 4556666676 8999888 676666666666554 457888999988642 1
Q ss_pred --CCCccceEEecccccc
Q 023034 245 --ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 --~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 101 ~~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 0136899998876653
No 469
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=65.11 E-value=10 Score=33.12 Aligned_cols=43 Identities=21% Similarity=0.420 Sum_probs=34.0
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH
Q 023034 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ 222 (288)
Q Consensus 178 ~~~VLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~ 222 (288)
..+|--||+|+ |. ++..++..|. .|+..|++++.++.+.+++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~ 50 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHH
Confidence 56899999996 43 5666777777 99999999999888877664
No 470
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=64.97 E-value=41 Score=27.08 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=46.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-CCC
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-ASS 247 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~~ 247 (288)
++++||=.|++.|. +...|++.|. +|+.++.++..++...+. ..++.++.+|+.+.. + .-+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRE--------CPGIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------STTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHH--------cCCCCEEEEeCCCHHHHHHHHHHcC
Confidence 36788888875442 3445556666 899999998766544332 124566788887532 1 124
Q ss_pred ccceEEecccccc
Q 023034 248 SIDAVHAGAAIHC 260 (288)
Q Consensus 248 sfD~V~~~~vl~h 260 (288)
..|+|+.+..+..
T Consensus 76 ~id~vi~~Ag~~~ 88 (244)
T 3d3w_A 76 PVDLLVNNAAVAL 88 (244)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 6899998766543
No 471
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=64.87 E-value=5.5 Score=30.22 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=26.4
Q ss_pred CCceeCCCCCCCCcccCCCCCccccccCCceecCCCCcccccCCC
Q 023034 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (288)
Q Consensus 69 l~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g 113 (288)
..+..||.|+.-|....+.. -....+.|+.|+....+...
T Consensus 22 ~~~~FCPeCgNmL~pked~~-----~~~l~~~CrtCgY~~~~~~~ 61 (133)
T 3qt1_I 22 TTFRFCRDCNNMLYPREDKE-----NNRLLFECRTCSYVEEAGSP 61 (133)
T ss_dssp CCCCBCTTTCCBCBCCBCTT-----TCCBCCBCSSSCCBCCCSCS
T ss_pred cCCeeCCCCCCEeeECccCC-----CceeEEECCCCCCcEEcCCc
Confidence 44667999999876643210 01236899999987766544
No 472
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=64.77 E-value=28 Score=28.41 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=49.9
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
++++|=.|++.|. +...|++.|. +|+.++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGA--NVVVNYAGNEQKANEVVDEIKKL----GSDAIAVRADVANAEDVTNMVKQTV 77 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 5677777765442 3455556666 9999998 777766665555544 356888899987642 10
Q ss_pred --CCccceEEeccccc
Q 023034 246 --SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 --~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 78 ~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 78 DVFGQVDILVNNAGVT 93 (246)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 13689999877654
No 473
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=64.76 E-value=2 Score=30.03 Aligned_cols=37 Identities=14% Similarity=0.426 Sum_probs=23.1
Q ss_pred CceeCCCCCCCCccc-CCCCCccccccCCceecCCCCccccc
Q 023034 70 NVLACPICYKPLTWI-GDSSLSIESAAGSSLQCNTCKKTYSG 110 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~-~~~~~~~~~i~~~~l~C~~C~~~~~~ 110 (288)
..|.||.|+..-... .. ......+.+.|..|+..|..
T Consensus 22 t~F~CPfCnh~~sV~vki----dk~~~~g~l~C~~Cg~~~~~ 59 (85)
T 1wii_A 22 TQFTCPFCNHEKSCDVKM----DRARNTGVISCTVCLEEFQT 59 (85)
T ss_dssp SCCCCTTTCCSSCEEEEE----ETTTTEEEEEESSSCCEEEE
T ss_pred CeEcCCCCCCCCeEEEEE----EccCCEEEEEcccCCCeEEe
Confidence 458899999962211 10 00112468999999988755
No 474
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=64.42 E-value=36 Score=28.76 Aligned_cols=76 Identities=9% Similarity=0.123 Sum_probs=52.3
Q ss_pred CCCeEEEEcCcc----ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C--
Q 023034 177 LGGNIIDASCGS----GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~----G~-~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-- 244 (288)
.++++|-.|.+. |. +...|++.|. +|+.++.++...+.+++..... .++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 477899999763 32 5566777776 8999999976655555544443 35788999987642 0
Q ss_pred ---CCCccceEEeccccc
Q 023034 245 ---ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 ---~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 103 ~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHHHTSCCSEEEECCCCC
T ss_pred HHHhcCCCCEEEECCccC
Confidence 114789999887654
No 475
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=64.32 E-value=25 Score=29.11 Aligned_cols=77 Identities=17% Similarity=0.163 Sum_probs=52.7
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEE-eCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC--
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gv-D~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.+ +.++..++.+.+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 46788988887653 4566666776 88887 77777776666666554 356888999987642 10
Q ss_pred ---CCccceEEeccccc
Q 023034 246 ---SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+....
T Consensus 81 ~~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHCSEEEEEECCCCC
T ss_pred HHHhCCCCEEEECCCcc
Confidence 14689999876543
No 476
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=64.20 E-value=12 Score=32.70 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=35.3
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHH
Q 023034 174 KPVLGGNIIDASCGS-GLFSRIFAKSG-LFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 174 ~~~~~~~VLDiGcG~-G~~~~~l~~~~-~~~~v~gvD~s~~~l~~A~~~ 220 (288)
.. ++.+||-+|+|. |.++..+++.. ++.+|+++|.+++-++.+++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh
Confidence 45 689999999974 67776666653 134899999999988888764
No 477
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=64.12 E-value=27 Score=29.13 Aligned_cols=70 Identities=17% Similarity=0.128 Sum_probs=49.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC---------C
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------F 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp---------~ 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+.. -
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL--GVVIADLAAEKGKALADEL-------GNRAEFVSTNVTSEDSVLAAIEAAN 99 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 36778888877653 4556666676 9999999998776665543 346889999987642 1
Q ss_pred CCCccceEEec
Q 023034 245 ASSSIDAVHAG 255 (288)
Q Consensus 245 ~~~sfD~V~~~ 255 (288)
..+..|+++.+
T Consensus 100 ~~~~id~lv~~ 110 (281)
T 3ppi_A 100 QLGRLRYAVVA 110 (281)
T ss_dssp TSSEEEEEEEC
T ss_pred HhCCCCeEEEc
Confidence 12467888876
No 478
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=64.05 E-value=4.2 Score=32.33 Aligned_cols=29 Identities=24% Similarity=0.489 Sum_probs=20.5
Q ss_pred ceeCCCCCCC---CcccCCCCCccccccCCceecCCCCccc
Q 023034 71 VLACPICYKP---LTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (288)
Q Consensus 71 ~l~CP~C~~~---l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 108 (288)
...||.|+.. +... ...+.+.|..||.+-
T Consensus 21 ~~~CPECGs~~t~IV~D---------~erGE~VCsdCGLVL 52 (197)
T 3k1f_M 21 VLTCPECKVYPPKIVER---------FSEGDVVCALCGLVL 52 (197)
T ss_dssp CCCCTTTCCSSCCEEEE---------GGGTEEEETTTCBBC
T ss_pred CeECcCCCCcCCeEEEe---------CCCCEEEEcCCCCCc
Confidence 3469999982 3321 246899999999764
No 479
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=63.83 E-value=11 Score=32.99 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=30.5
Q ss_pred CeEEEEcCcc-chHH-HHHH-HhCCCCE-EEEEeCCHH---HHHHHHH
Q 023034 179 GNIIDASCGS-GLFS-RIFA-KSGLFSL-VVALDYSEN---MLKQCYE 219 (288)
Q Consensus 179 ~~VLDiGcG~-G~~~-~~l~-~~~~~~~-v~gvD~s~~---~l~~A~~ 219 (288)
.+||-+|+|. |.++ ..++ +.. +.+ |+++|.+++ -++.+++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~ 220 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEE 220 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHH
Confidence 8999999864 7777 7777 542 235 999999987 7787765
No 480
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=63.44 E-value=15 Score=31.28 Aligned_cols=79 Identities=23% Similarity=0.240 Sum_probs=55.1
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.+|.++..++.+.+.+...+ ..++.++.+|+.+..-
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA--NVAVAARSPRELSSVTAELGELG---AGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHTTSS---SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhC---CCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 46788888876553 4556666776 99999999988777776665541 2578899999986420
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 115 ~~~g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 115 DAFGALDVVCANAGIFP 131 (293)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 1146799998776543
No 481
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=63.33 E-value=29 Score=28.53 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=50.0
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
+++||=.|++.|. +...|++.+. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKK----GFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 5678877765442 3445555666 9999999988776666555544 356888899987632 11
Q ss_pred --CCccceEEeccccc
Q 023034 246 --SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 --~~sfD~V~~~~vl~ 259 (288)
.+..|+|+.+..+.
T Consensus 88 ~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 88 MFGGKLDILINNLGAI 103 (266)
T ss_dssp HHTTCCSEEEEECCC-
T ss_pred HhCCCCcEEEECCCCC
Confidence 15689998876654
No 482
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=63.32 E-value=27 Score=29.31 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-CC
Q 023034 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-AS 246 (288)
Q Consensus 176 ~~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~ 246 (288)
..++++|=.|++.|. +...|++.|. +|+.++.++..++.+.+.+ ..++.++.+|+.+.. + .-
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA--TVIMAVRDTRKGEAAARTM-------AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHTTS-------SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHh-------cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 347788888877553 4455666676 9999999987766554421 357889999987642 1 11
Q ss_pred CccceEEeccccc
Q 023034 247 SSIDAVHAGAAIH 259 (288)
Q Consensus 247 ~sfD~V~~~~vl~ 259 (288)
+..|+++.+..+.
T Consensus 85 ~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 85 SGADVLINNAGIM 97 (291)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCcCC
Confidence 4689999877654
No 483
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=63.22 E-value=9.9 Score=32.72 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=31.7
Q ss_pred eEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 180 NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 180 ~VLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+||-+|+ |.|.++..+++... .+|+++|.+++-++.+++.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~~~~~~~~~~l 190 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSGRESTHGYLKSL 190 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGGHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 4999987 35888888877632 4999999999988888764
No 484
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=63.22 E-value=27 Score=29.26 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=49.2
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC----
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (288)
+++||=.|++.|. +...|++.|. +|++++.++..++...+.+...+ ..++.++.+|+.+.. +.
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG---AASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC---CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 6688888865442 3445556666 99999999988777666555441 246888999987632 00
Q ss_pred -CCccceEEec
Q 023034 246 -SSSIDAVHAG 255 (288)
Q Consensus 246 -~~sfD~V~~~ 255 (288)
.+..|+++.+
T Consensus 103 ~~g~iD~li~n 113 (286)
T 1xu9_A 103 LMGGLDMLILN 113 (286)
T ss_dssp HHTSCSEEEEC
T ss_pred HcCCCCEEEEC
Confidence 1368999876
No 485
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=63.08 E-value=20 Score=37.64 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=36.2
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
..++||+-||.|.+..-|.+.|....+.++|+++.+++.-+.+
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N 893 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLN 893 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHH
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh
Confidence 4679999999999999999887423588999999988877766
No 486
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=63.08 E-value=37 Score=28.53 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=51.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCCCCEEEEEecCCCCC-----CCC-
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-FPKENFLLVRADISRLP-----FAS- 246 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g-~~~~~i~~~~~d~~~lp-----~~~- 246 (288)
.+++||=.|++.|. +...|++.|. +|+.++.++..++...+.+..... ....++.++.+|+.+.. +..
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 36788888865442 3445555666 999999998877766665544100 01357889999987642 111
Q ss_pred ----CccceEEeccccc
Q 023034 247 ----SSIDAVHAGAAIH 259 (288)
Q Consensus 247 ----~sfD~V~~~~vl~ 259 (288)
+..|+|+.+....
T Consensus 95 ~~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 95 LDTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 3589999877643
No 487
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=63.05 E-value=26 Score=29.32 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=53.5
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|-.|++.|. +...|++.|. +|+.++.+...++.+.+.+.... ..++.++.+|+.+.. +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGC--HTVIASRSLPRVLTAARKLAGAT---GRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHH---SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 36788988877653 4455566666 99999999887766665554321 357889999987642 1
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 101 ~~~g~id~lv~nAg~~~ 117 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNF 117 (277)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCcCCC
Confidence 0146899998776543
No 488
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=63.02 E-value=18 Score=32.31 Aligned_cols=83 Identities=16% Similarity=0.137 Sum_probs=54.3
Q ss_pred CCeEEEEcCccchHHHHH----HHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CCCCc
Q 023034 178 GGNIIDASCGSGLFSRIF----AKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FASSS 248 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~~~l----~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~~~s 248 (288)
+++||=.|++ |..+..+ .+.++ .+|+++|.++..+....+.+.........++.++.+|+.+.. +....
T Consensus 35 ~k~vLVTGat-G~IG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 35 QSRFLVLGGA-GSIGQAVTKEIFKRNP-QKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCEEEEEcCC-hHHHHHHHHHHHHCCC-CEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 5688888743 5554444 44452 499999999987766655554431111257889999988642 22357
Q ss_pred cceEEeccccccCC
Q 023034 249 IDAVHAGAAIHCWS 262 (288)
Q Consensus 249 fD~V~~~~vl~h~~ 262 (288)
+|+|+......|++
T Consensus 113 ~D~Vih~Aa~~~~~ 126 (399)
T 3nzo_A 113 YDYVLNLSALKHVR 126 (399)
T ss_dssp CSEEEECCCCCCGG
T ss_pred CCEEEECCCcCCCc
Confidence 89999887776653
No 489
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=62.86 E-value=20 Score=31.38 Aligned_cols=47 Identities=19% Similarity=0.201 Sum_probs=35.0
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYE 219 (288)
Q Consensus 171 ~~l~~~~~~~VLDiGc--G~G~~~~~l~~~-~~~~~v~gvD~s~~~l~~A~~ 219 (288)
+.....++.+||-.|+ |.|.....+++. |. +|+++|.+++.++.+++
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGL--KILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHH
Confidence 3445667899999997 456666666554 44 99999999988887764
No 490
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=62.82 E-value=5.7 Score=24.21 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=18.3
Q ss_pred CceeCCCCCCCCcccCCCCCccccccCCceecCCCCc
Q 023034 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (288)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~ 106 (288)
..+.|-.|+..+...+-. .-...+|+-||.
T Consensus 2 ~iY~C~rCg~~fs~~el~-------~lP~IrCpyCGy 31 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQLK-------VLPGVRCPYCGY 31 (48)
T ss_dssp ---CCCCTTTTCCCCCSC-------CCSSSCCTTTCC
T ss_pred cEEEeeccCCCccHHHHh-------hCCCcccCccCc
Confidence 467799999877654421 224678998874
No 491
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=62.62 E-value=5.5 Score=29.67 Aligned_cols=40 Identities=13% Similarity=0.360 Sum_probs=23.0
Q ss_pred ceeCCCCCCCC-cccCCCCCccccccCCceecCCCCccccc
Q 023034 71 VLACPICYKPL-TWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (288)
Q Consensus 71 ~l~CP~C~~~l-~~~~~~~~~~~~i~~~~l~C~~C~~~~~~ 110 (288)
...||.|+..- .....+..+.+....-.+.|.+|++.+..
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w~~ 112 (122)
T 1twf_I 72 DRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTS 112 (122)
T ss_dssp CCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEEEC
T ss_pred CCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEecc
Confidence 46799999842 11111122222234456789999987654
No 492
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=62.57 E-value=42 Score=27.69 Aligned_cols=79 Identities=24% Similarity=0.250 Sum_probs=52.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|=.|++.|. +...|++.|. +|+.++.++..++...+.+... ....++.++.+|+.+.. +.
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLET--APDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH--CTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 36788888876552 4455666676 9999999988777665555432 01246888899987642 10
Q ss_pred --CCccceEEeccccc
Q 023034 246 --SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 --~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 88 ~~~g~id~lv~nAg~~ 103 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIE 103 (267)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 13679999877654
No 493
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=62.35 E-value=28 Score=29.49 Aligned_cols=80 Identities=24% Similarity=0.330 Sum_probs=52.0
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC---
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (288)
.++++|-.|++.|. +...|++.|. +|+.++.++..++...+.+... +....++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 36678877766542 3455566676 9999999998777666655543 111126888999987642 11
Q ss_pred --CCccceEEeccccc
Q 023034 246 --SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 --~~sfD~V~~~~vl~ 259 (288)
-+..|+++.+..+.
T Consensus 102 ~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 102 AKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 13689999877654
No 494
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=62.28 E-value=18 Score=30.45 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=52.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C----
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++.+.+.+...+ ...+.++.+|+.+.. +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY--SVVITGRRPDVLDAAAGEIGGRT---GNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 46778888876553 4455666676 99999999988877776665541 234588999987642 0
Q ss_pred -CCCccceEEeccccc
Q 023034 245 -ASSSIDAVHAGAAIH 259 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~ 259 (288)
.-+..|+++.+..+.
T Consensus 107 ~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 107 AEFARLDLLVNNAGSN 122 (281)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 014679999887654
No 495
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=62.25 E-value=23 Score=30.40 Aligned_cols=48 Identities=15% Similarity=0.093 Sum_probs=33.8
Q ss_pred hhcCCCCCCeEEEEc-Cc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Q 023034 171 GYLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (288)
Q Consensus 171 ~~l~~~~~~~VLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~ 220 (288)
+.....++.+||-+| +| .|.++..+++... .+|++++ ++.-++.+++.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~-~~~~~~~~~~l 195 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTA-SKRNHAFLKAL 195 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE-CHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEe-ccchHHHHHHc
Confidence 445667799999996 55 4888877777632 4899998 45446666653
No 496
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=62.18 E-value=30 Score=28.42 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=50.7
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHH--HHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC--
Q 023034 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENM--LKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~--l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (288)
++++|-.|++.|. +...|++.|. +|+.++.++.. ++...+.+... ..++.++.+|+.+.. +.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF--DIAVADLPQQEEQAAETIKLIEAA----DQKAVFVGLDVTDKANFDSAIDEA 75 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC--EEEEEECGGGHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4578888876552 4455666676 89999988766 55555544443 356888999987642 10
Q ss_pred ---CCccceEEecccccc
Q 023034 246 ---SSSIDAVHAGAAIHC 260 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~h 260 (288)
-+..|+++.+..+.+
T Consensus 76 ~~~~g~iD~lv~nAg~~~ 93 (258)
T 3a28_C 76 AEKLGGFDVLVNNAGIAQ 93 (258)
T ss_dssp HHHHTCCCEEEECCCCCC
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 136899998776543
No 497
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=62.17 E-value=24 Score=29.44 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=50.4
Q ss_pred CeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----C-----C
Q 023034 179 GNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-----A 245 (288)
Q Consensus 179 ~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-----~ 245 (288)
++||--|++.|. ....|++.|. +|+.+|.+++.++...+. ..++.++.+|+.+.. + .
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD--KVCFIDIDEKRSADFAKE--------RPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHTT--------CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHh--------cCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 567877887764 4566777777 999999998766544332 457888999987632 0 1
Q ss_pred CCccceEEecccccc
Q 023034 246 SSSIDAVHAGAAIHC 260 (288)
Q Consensus 246 ~~sfD~V~~~~vl~h 260 (288)
-+..|+++.+..+..
T Consensus 73 ~g~iDiLVNNAG~~~ 87 (247)
T 3ged_A 73 LQRIDVLVNNACRGS 87 (247)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 157899998776544
No 498
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=62.02 E-value=44 Score=27.44 Aligned_cols=75 Identities=21% Similarity=0.228 Sum_probs=52.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCCC---------
Q 023034 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (288)
Q Consensus 177 ~~~~VLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (288)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+..-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 46788988877653 4556666776 9999999998777665543 2467889999876421
Q ss_pred -CCCccceEEecccccc
Q 023034 245 -ASSSIDAVHAGAAIHC 260 (288)
Q Consensus 245 -~~~sfD~V~~~~vl~h 260 (288)
.-+..|+++.+..+..
T Consensus 78 ~~~g~id~lv~nAg~~~ 94 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSE 94 (255)
T ss_dssp HHHSSEEEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 1146899988776543
No 499
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=61.80 E-value=5.3 Score=30.45 Aligned_cols=69 Identities=22% Similarity=0.233 Sum_probs=41.5
Q ss_pred CCCCeEEEEcCcc-chH-HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC----CCCCcc
Q 023034 176 VLGGNIIDASCGS-GLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSI 249 (288)
Q Consensus 176 ~~~~~VLDiGcG~-G~~-~~~l~~~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~sf 249 (288)
.++.+|+=+|+|. |.. +..+.+.+. +|+++|.++..++.+++ ..+..++.+|..+.. ..-..+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~~~~~~~~~~~---------~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDKNEYAFHRLNS---------EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGGGGSCT---------TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHh---------cCCCcEEEecCCCHHHHHHcCcccC
Confidence 3577899999875 543 344555565 99999999865543321 123445667654321 112357
Q ss_pred ceEEec
Q 023034 250 DAVHAG 255 (288)
Q Consensus 250 D~V~~~ 255 (288)
|+|+..
T Consensus 86 d~Vi~~ 91 (155)
T 2g1u_A 86 DMVFAF 91 (155)
T ss_dssp SEEEEC
T ss_pred CEEEEE
Confidence 888874
No 500
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=61.41 E-value=30 Score=28.32 Aligned_cols=75 Identities=15% Similarity=-0.009 Sum_probs=49.4
Q ss_pred CCeEEEEcCccchHH----HHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCCC-----CC--
Q 023034 178 GGNIIDASCGSGLFS----RIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (288)
Q Consensus 178 ~~~VLDiGcG~G~~~----~~l~~-~~~~~~v~gvD~s~~~l~~A~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (288)
+++||=.|++ |.++ ..|++ .+. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 5677877754 4444 44455 555 9999999988777666666554 356788999987642 00
Q ss_pred ---CCccceEEeccccc
Q 023034 246 ---SSSIDAVHAGAAIH 259 (288)
Q Consensus 246 ---~~sfD~V~~~~vl~ 259 (288)
.+.+|+|+.+..+.
T Consensus 77 ~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHSSEEEEEECCCCC
T ss_pred HHhcCCCCEEEECCccc
Confidence 13689998876543
Done!