Your job contains 1 sequence.
>023037
MWIYIFFLFSDEFTVSRVLCSILEKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQT
VKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQ
TTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQ
LLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAD
AATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023037
(288 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059289 - symbol:FUS12 "FUSCA 12" species:3702... 1193 2.8e-121 1
UNIPROTKB|E2REA8 - symbol:COPS2 "Uncharacterized protein"... 845 2.1e-84 1
UNIPROTKB|P61201 - symbol:COPS2 "COP9 signalosome complex... 845 2.1e-84 1
UNIPROTKB|F1SQG5 - symbol:COPS2 "Uncharacterized protein"... 845 2.1e-84 1
MGI|MGI:1330276 - symbol:Cops2 "COP9 (constitutive photom... 845 2.1e-84 1
RGD|628791 - symbol:Cops2 "COP9 signalosome subunit 2" sp... 845 2.1e-84 1
UNIPROTKB|P61203 - symbol:Cops2 "COP9 signalosome complex... 845 2.1e-84 1
ZFIN|ZDB-GENE-040625-15 - symbol:cops2 "COP9 constitutive... 841 5.6e-84 1
UNIPROTKB|G3X736 - symbol:COPS2 "Uncharacterized protein"... 836 1.9e-83 1
FB|FBgn0013746 - symbol:alien "alien" species:7227 "Droso... 832 5.0e-83 1
DICTYBASE|DDB_G0289361 - symbol:csn2 "proteasome componen... 825 2.8e-82 1
ASPGD|ASPL0000076227 - symbol:csnB species:162425 "Emeric... 798 2.0e-79 1
UNIPROTKB|G5EHS2 - symbol:MGCH7_ch7g1103 "COP9 signalosom... 790 1.4e-78 1
WB|WBGene00000814 - symbol:csn-2 species:6239 "Caenorhabd... 771 1.5e-76 1
UNIPROTKB|O01422 - symbol:csn-2 "COP9 signalosome complex... 771 1.5e-76 1
POMBASE|SPAPB17E12.04c - symbol:csn2 "COP9/signalosome co... 620 1.5e-60 1
CGD|CAL0004448 - symbol:orf19.1400 species:5476 "Candida ... 280 1.7e-23 1
UNIPROTKB|Q59YC7 - symbol:CSN2 "Potential COP9 signalosom... 280 1.7e-23 1
FB|FBgn0028689 - symbol:Rpn6 "Regulatory particle non-ATP... 144 2.1e-07 1
DICTYBASE|DDB_G0281315 - symbol:psmD11 "26S proteasome no... 139 7.6e-07 1
ZFIN|ZDB-GENE-030131-984 - symbol:psmd11b "proteasome (pr... 139 7.9e-07 1
UNIPROTKB|Q2KI42 - symbol:PSMD11 "26S proteasome non-ATPa... 137 1.3e-06 1
UNIPROTKB|E2RJ26 - symbol:PSMD11 "Uncharacterized protein... 137 1.3e-06 1
UNIPROTKB|O00231 - symbol:PSMD11 "26S proteasome non-ATPa... 137 1.3e-06 1
MGI|MGI:1916327 - symbol:Psmd11 "proteasome (prosome, mac... 137 1.3e-06 1
RGD|1306450 - symbol:Psmd11 "proteasome (prosome, macropa... 137 1.3e-06 1
ZFIN|ZDB-GENE-030131-2711 - symbol:psmd11a "proteasome (p... 132 5.1e-06 1
UNIPROTKB|F1RKW8 - symbol:PSMD11 "Uncharacterized protein... 128 1.3e-05 1
UNIPROTKB|P68353 - symbol:CSN2 "COP9 signalosome complex ... 64 9.2e-05 2
TAIR|locus:2030017 - symbol:ATS9 "AT1G29150" species:3702... 119 0.00015 1
UNIPROTKB|F6XBL2 - symbol:psmd11 "26S proteasome non-ATPa... 118 0.00020 1
CGD|CAL0003109 - symbol:RPN6 species:5476 "Candida albica... 118 0.00021 1
POMBASE|SPAC23G3.11 - symbol:rpn6 "19S proteasome regulat... 112 0.00096 1
>TAIR|locus:2059289 [details] [associations]
symbol:FUS12 "FUSCA 12" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0030163 GO:GO:0009585
EMBL:AC005623 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 EMBL:AF395058 EMBL:AY050437 EMBL:AY133536
EMBL:AY087622 IPI:IPI00525604 PIR:D84667 RefSeq:NP_565632.1
UniGene:At.13162 ProteinModelPortal:Q8W207 SMR:Q8W207 IntAct:Q8W207
STRING:Q8W207 PaxDb:Q8W207 PRIDE:Q8W207 EnsemblPlants:AT2G26990.1
GeneID:817241 KEGG:ath:AT2G26990 TAIR:At2g26990 eggNOG:COG5159
HOGENOM:HOG000194333 InParanoid:Q8W207 KO:K12176 OMA:SNSEPDV
PhylomeDB:Q8W207 ProtClustDB:CLSN2688459 Genevestigator:Q8W207
GermOnline:AT2G26990 Uniprot:Q8W207
Length = 439
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 227/264 (85%), Positives = 239/264 (90%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
KG+VET+PE AL+GFAEVV MEPEKA+WGFKALKQTVK+YYRLGKYKEMM+AY EMLTYI
Sbjct: 34 KGMVETEPEEALSGFAEVVQMEPEKADWGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYI 93
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
KSAVTRNYSEKCINNIMDFVSGSASQN LL+EFYQTTLKALEEAKNERLWFKTNLKLC
Sbjct: 94 KSAVTRNYSEKCINNIMDFVSGSASQNTGLLQEFYQTTLKALEEAKNERLWFKTNLKLCN 153
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
IWFD+GEY RM+KILKELHKSCQ+EDGTDDQKKGSQLLEVYAIEIQ+YTET
Sbjct: 154 IWFDIGEYRRMTKILKELHKSCQKEDGTDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQL 213
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHPRIMGIIRECGGKMHMAERQW +AATDFFEAFKNYDEAGNQRRIQCL
Sbjct: 214 YHKALAIKSAIPHPRIMGIIRECGGKMHMAERQWEEAATDFFEAFKNYDEAGNQRRIQCL 273
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLMESEVNPFDGQEAKP
Sbjct: 274 KYLVLANMLMESEVNPFDGQEAKP 297
>UNIPROTKB|E2REA8 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301
CTD:9318 InterPro:IPR019280 Pfam:PF10075 EMBL:AAEX03016114
RefSeq:XP_535470.1 ProteinModelPortal:E2REA8 PRIDE:E2REA8
Ensembl:ENSCAFT00000023590 GeneID:478295 KEGG:cfa:478295
Uniprot:E2REA8
Length = 443
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 100 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 157
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 LYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 217
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 218 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 277
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 KYLVLANMLMKSGINPFDSQEAKP 301
>UNIPROTKB|P61201 [details] [associations]
symbol:COPS2 "COP9 signalosome complex subunit 2"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006366
GO:GO:0004871 Gene3D:1.25.40.10 GO:GO:0008180 CleanEx:HS_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN
EMBL:AF084260 EMBL:AF100762 EMBL:AF212227 EMBL:CR542063
EMBL:BC012629 EMBL:L40388 EMBL:AF120268 IPI:IPI00018813
IPI:IPI00743825 RefSeq:NP_001137359.1 RefSeq:NP_004227.1
UniGene:Hs.369614 ProteinModelPortal:P61201 SMR:P61201
DIP:DIP-42076N IntAct:P61201 MINT:MINT-1204035 STRING:P61201
PhosphoSite:P61201 DMDM:47117681 PaxDb:P61201 PRIDE:P61201
DNASU:9318 Ensembl:ENST00000299259 Ensembl:ENST00000388901
GeneID:9318 KEGG:hsa:9318 UCSC:uc001zxf.3 UCSC:uc001zxh.3
GeneCards:GC15M049417 HGNC:HGNC:30747 HPA:HPA016867 HPA:HPA018271
MIM:604508 neXtProt:NX_P61201 PharmGKB:PA134952445 GenomeRNAi:9318
NextBio:34905 ArrayExpress:P61201 Bgee:P61201 CleanEx:HS_COPS2
Genevestigator:P61201 GermOnline:ENSG00000166200 InterPro:IPR019280
Pfam:PF10075 Uniprot:P61201
Length = 443
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 100 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 157
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 LYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 217
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 218 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 277
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 KYLVLANMLMKSGINPFDSQEAKP 301
>UNIPROTKB|F1SQG5 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR011990 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
InterPro:IPR019280 Pfam:PF10075 EMBL:CU041367 EMBL:CU407149
Ensembl:ENSSSCT00000005137 ArrayExpress:F1SQG5 Uniprot:F1SQG5
Length = 385
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 32 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 91
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 92 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 149
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 150 LYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 209
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 210 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 269
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 270 KYLVLANMLMKSGINPFDSQEAKP 293
>MGI|MGI:1330276 [details] [associations]
symbol:Cops2 "COP9 (constitutive photomorphogenic) homolog,
subunit 2 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1330276 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0030182 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0035914 CleanEx:MM_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 CTD:9318
HOVERGEN:HBG003924 InterPro:IPR019280 Pfam:PF10075 EMBL:AF087688
EMBL:AF114247 EMBL:AF114236 EMBL:AF114237 EMBL:AF114238
EMBL:AF114239 EMBL:AF114240 EMBL:AF114241 EMBL:AF114242
EMBL:AF114244 EMBL:AF114245 EMBL:AF114246 EMBL:AK010383
EMBL:AK084421 EMBL:AK132207 EMBL:BC023096 EMBL:AF071312
IPI:IPI00120513 IPI:IPI00480307 RefSeq:NP_034069.2 UniGene:Mm.3596
ProteinModelPortal:P61202 SMR:P61202 STRING:P61202
PhosphoSite:P61202 PaxDb:P61202 PRIDE:P61202
Ensembl:ENSMUST00000028635 Ensembl:ENSMUST00000110463 GeneID:12848
KEGG:mmu:12848 ChiTaRS:COPS2 NextBio:282396 Bgee:P61202
Genevestigator:P61202 GermOnline:ENSMUSG00000027206 Uniprot:P61202
Length = 443
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 100 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 157
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 LYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 217
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 218 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 277
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 KYLVLANMLMKSGINPFDSQEAKP 301
>RGD|628791 [details] [associations]
symbol:Cops2 "COP9 signalosome subunit 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0010388
"cullin deneddylation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 100 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 157
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 LYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 217
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 218 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 277
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 KYLVLANMLMKSGINPFDSQEAKP 301
>UNIPROTKB|P61203 [details] [associations]
symbol:Cops2 "COP9 signalosome complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 157/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 100 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 157
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 LYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 217
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 218 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 277
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 KYLVLANMLMKSGINPFDSQEAKP 301
>ZFIN|ZDB-GENE-040625-15 [details] [associations]
symbol:cops2 "COP9 constitutive photomorphogenic
homolog subunit 2 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0008180
"signalosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040625-15 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
GeneTree:ENSGT00530000063301 EMBL:BC071320 IPI:IPI00488001
RefSeq:NP_001002055.1 UniGene:Dr.78251 ProteinModelPortal:Q6IQT4
STRING:Q6IQT4 PRIDE:Q6IQT4 Ensembl:ENSDART00000006124 GeneID:415145
KEGG:dre:415145 CTD:9318 HOVERGEN:HBG003924 InParanoid:Q6IQT4
OrthoDB:EOG43N7CN NextBio:20818820 ArrayExpress:Q6IQT4 Bgee:Q6IQT4
Uniprot:Q6IQT4
Length = 443
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 156/264 (59%), Positives = 203/264 (76%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCK 144
+SAVTRNYSEK IN+I+D++S S+ LL+EFY+TTL+AL++AKN+RLWFKTN KL K
Sbjct: 100 RSAVTRNYSEKSINSILDYIS--TSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGK 157
Query: 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXX 204
++ + E+G++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 LYLEREEFGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLKAL 217
Query: 205 XXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCL 264
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR CL
Sbjct: 218 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 277
Query: 265 KYLVLANMLMESEVNPFDGQEAKP 288
KYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 KYLVLANMLMKSGINPFDSQEAKP 301
>UNIPROTKB|G3X736 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
EMBL:DAAA02029106 UniGene:Bt.37059 ProteinModelPortal:G3X736
SMR:G3X736 PRIDE:G3X736 Ensembl:ENSBTAT00000017862 NextBio:20925241
Uniprot:G3X736
Length = 450
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 157/269 (58%), Positives = 203/269 (75%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L E DP+ AL+ F +V+ +E EK EWGFKALKQ +K+ ++L + EMM+ Y+++LTYI
Sbjct: 40 KALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYI 99
Query: 85 KSAVTRNYSEKCINNIMDFVSGSASQN-----FSLLREFYQTTLKALEEAKNERLWFKTN 139
+SAVTRNYSEK IN+I+D++S S + LL+EFY+TTL+AL++AKN+RLWFKTN
Sbjct: 100 RSAVTRNYSEKSINSILDYISTSKQNSDFLCQMDLLQEFYETTLEALKDAKNDRLWFKTN 159
Query: 140 LKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXX 199
KL K++ + EYG++ KIL++LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 160 TKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNK 219
Query: 200 XXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQR 259
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ R
Sbjct: 220 KLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPR 279
Query: 260 RIQCLKYLVLANMLMESEVNPFDGQEAKP 288
R CLKYLVLANMLM+S +NPFD QEAKP
Sbjct: 280 RTTCLKYLVLANMLMKSGINPFDSQEAKP 308
>FB|FBgn0013746 [details] [associations]
symbol:alien "alien" species:7227 "Drosophila melanogaster"
[GO:0008231 "repressor ecdysone receptor complex" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IPI] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008180 "signalosome" evidence=NAS;IPI] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892 GO:GO:0007095 GO:GO:0050821
GO:GO:0006911 EMBL:AE014134 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0008180 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 EMBL:AF129079
EMBL:AY069836 EMBL:AY118505 EMBL:U57758 RefSeq:NP_523517.1
RefSeq:NP_723438.1 UniGene:Dm.20642 ProteinModelPortal:Q94899
SMR:Q94899 DIP:DIP-19507N IntAct:Q94899 MINT:MINT-775221
STRING:Q94899 PaxDb:Q94899 PRIDE:Q94899 EnsemblMetazoa:FBtr0079780
EnsemblMetazoa:FBtr0079781 EnsemblMetazoa:FBtr0331452 GeneID:34225
KEGG:dme:Dmel_CG9556 CTD:34225 FlyBase:FBgn0013746
InParanoid:Q94899 OrthoDB:EOG4QNKBG PhylomeDB:Q94899
GenomeRNAi:34225 NextBio:787477 Bgee:Q94899 GermOnline:CG9556
GO:GO:0008231 Uniprot:Q94899
Length = 444
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 159/265 (60%), Positives = 201/265 (75%)
Query: 25 KGLVETDPEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTY 83
K L E +P+ ALA F +V+ +E EK EWGFKALKQ +K+ +RL Y EMM Y+++LTY
Sbjct: 40 KALKEEEPKAALASFQKVLDLENGEKGEWGFKALKQMIKINFRLCNYDEMMVRYKQLLTY 99
Query: 84 IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLC 143
IKSAVTRN+SEK IN+I+D++S S+N +LL+ FY+TTL AL +AKN+RLWFKTN KL
Sbjct: 100 IKSAVTRNHSEKSINSILDYIS--TSKNMALLQNFYETTLDALRDAKNDRLWFKTNTKLG 157
Query: 144 KIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXX 203
K++FD ++ ++ KILK+LH+SCQ +DG DD KKG+QLLE+YA+EIQMYT
Sbjct: 158 KLYFDRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKA 217
Query: 204 XXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQC 263
SAIPHP IMG+IRECGGKMH+ E ++ A TDFFEAFKNYDE+G+ RR C
Sbjct: 218 LYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTC 277
Query: 264 LKYLVLANMLMESEVNPFDGQEAKP 288
LKYLVLANMLM+S +NPFD QEAKP
Sbjct: 278 LKYLVLANMLMKSGINPFDSQEAKP 302
>DICTYBASE|DDB_G0289361 [details] [associations]
symbol:csn2 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0289361 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CM000154_GR EMBL:AAFI02000139
Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 KO:K12176 OMA:SNSEPDV EMBL:DQ309430
RefSeq:XP_636285.1 ProteinModelPortal:Q54HL6 STRING:Q54HL6
EnsemblProtists:DDB0233100 GeneID:8627103 KEGG:ddi:DDB_G0289361
ProtClustDB:CLSZ2429788 Uniprot:Q54HL6
Length = 449
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 153/265 (57%), Positives = 198/265 (74%)
Query: 25 KGLVETDPEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTY 83
KGL++ A+ + +VV +E EK EWGFKALK+ KLY+R+G + M++++++ L Y
Sbjct: 41 KGLIDESIPDAIKSYEKVVDLENGEKGEWGFKALKKITKLYFRIGDFDNMLESFKKFLPY 100
Query: 84 IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLC 143
KS+ + NY EK IN+++D VS S + ++++ + TLK+L + KNER+WF+TNLKL
Sbjct: 101 TKSSASSNYIEKGINSVLDMVSSSNTIELDMIQKVFDLTLKSLLDTKNERVWFRTNLKLA 160
Query: 144 KIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXX 203
K+ F+ EYGR++KIL++LHKSC+ EDGTDDQKKGSQL+++YA+EIQMYTET
Sbjct: 161 KLLFEKAEYGRLAKILRDLHKSCELEDGTDDQKKGSQLVDIYALEIQMYTETKNNKKLKD 220
Query: 204 XXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQC 263
SAIPHPRIMGIIRECGGKMHMAE++W A TDFFEAFKNYDEAGN RRIQC
Sbjct: 221 LYKKALEIKSAIPHPRIMGIIRECGGKMHMAEKEWEKAHTDFFEAFKNYDEAGNSRRIQC 280
Query: 264 LKYLVLANMLMESEVNPFDGQEAKP 288
LKYLVLA MLM S +NPFD EAKP
Sbjct: 281 LKYLVLACMLMLSTINPFDSTEAKP 305
>ASPGD|ASPL0000076227 [details] [associations]
symbol:csnB species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
EMBL:BN001303 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
EMBL:AACD01000081 RefSeq:XP_662387.1 STRING:Q5B3U7
EnsemblFungi:CADANIAT00005639 GeneID:2872575 KEGG:ani:AN4783.2
OrthoDB:EOG4PZNGN Uniprot:Q5B3U7
Length = 506
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 142/260 (54%), Positives = 191/260 (73%)
Query: 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTR 90
+PE A+ F V A+E +K +WGFK LKQ +KL ++LG+Y + ++ YRE+LTY+KSAVTR
Sbjct: 47 NPEEAIDEFLGVPALEQDKGDWGFKGLKQAIKLEFKLGRYSDAVEHYRELLTYVKSAVTR 106
Query: 91 NYSEKCINNIMDFVS-GSASQN-FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD 148
NYSEK INN++D++ GS + + + EFY TL + + NERLW KTN+KL ++W +
Sbjct: 107 NYSEKSINNMLDYIEKGSDDEKAYQCMEEFYSLTLNSFQNTNNERLWLKTNIKLARLWLE 166
Query: 149 MGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXX 208
EYG++SK ++ELH++CQREDG+DD KG+ LLE+YA+EIQMY ET
Sbjct: 167 RREYGQLSKKVRELHRACQREDGSDDPSKGTYLLELYALEIQMYAETKNNKRLKALYQRA 226
Query: 209 XXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLV 268
SA+PHP+IMGIIRECGGKMHM+E W +A +DFFE+F+NYDEAG+ +RIQ LKYLV
Sbjct: 227 LRVRSAVPHPKIMGIIRECGGKMHMSEENWEEAQSDFFESFRNYDEAGSMQRIQVLKYLV 286
Query: 269 LANMLMESEVNPFDGQEAKP 288
L MLM+S++NPF QE KP
Sbjct: 287 LTTMLMKSDINPFHSQETKP 306
>UNIPROTKB|G5EHS2 [details] [associations]
symbol:MGCH7_ch7g1103 "COP9 signalosome complex subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 EMBL:CM000230 EMBL:CM001237 InterPro:IPR013143
SMART:SM00753 KO:K12176 RefSeq:XP_003720496.1
ProteinModelPortal:G5EHS2 EnsemblFungi:MGG_10325T0 GeneID:2681900
KEGG:mgr:MGG_10325 Uniprot:G5EHS2
Length = 522
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 144/267 (53%), Positives = 189/267 (70%)
Query: 25 KGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84
K L ++DP+ A+ F + A+E K +WGFK LKQ +KL +++ Y + ++ Y+E+LTY+
Sbjct: 41 KQLKQSDPQEAIDEFLGIPALEESKGDWGFKGLKQAIKLEFKMQHYDKAIEHYKELLTYV 100
Query: 85 KSAVTRNYSEKCINNIMDFV---SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLK 141
KSAVTRNYSEK INN++D + +G + + + EFY TL + NERLW KTN+K
Sbjct: 101 KSAVTRNYSEKSINNMLDHIEKGAGGSPEAGKCMEEFYSLTLACFQNTNNERLWLKTNIK 160
Query: 142 LCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXX 201
LCK+ D EYG +++ L+ELHKSC+REDGTDD KG+ LLE+YA+EIQMY ET
Sbjct: 161 LCKLLLDRKEYGTVTRKLRELHKSCEREDGTDDPSKGTYLLEIYALEIQMYAETRNNKQL 220
Query: 202 XXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRI 261
SA+PHP+IMGIIRECGGKMHMAE W DA +DFFE+F+NYDEAG+ +RI
Sbjct: 221 KRLYQRALKVRSAVPHPKIMGIIRECGGKMHMAEENWKDAQSDFFESFRNYDEAGSLQRI 280
Query: 262 QCLKYLVLANMLMESEVNPFDGQEAKP 288
Q LKYL+L MLM S++NPFD QE KP
Sbjct: 281 QVLKYLLLTTMLMRSDINPFDSQETKP 307
>WB|WBGene00000814 [details] [associations]
symbol:csn-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0018991 GO:GO:0040010
GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV EMBL:FO080100 PIR:T25440 RefSeq:NP_491740.1
ProteinModelPortal:O01422 SMR:O01422 DIP:DIP-24665N IntAct:O01422
MINT:MINT-1040695 STRING:O01422 PaxDb:O01422 PRIDE:O01422
EnsemblMetazoa:B0025.2.1 EnsemblMetazoa:B0025.2.2
EnsemblMetazoa:B0025.2.3 GeneID:172278 KEGG:cel:CELE_B0025.2
UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 145/257 (56%), Positives = 193/257 (75%)
Query: 35 ALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSE 94
A+ F +V+ +E EK EWGFKALKQ +K+ + + ++M++ YR++LTYIKSAVT+NYSE
Sbjct: 47 AIKSFEKVLELEGEKGEWGFKALKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSE 106
Query: 95 KCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGR 154
K IN I+D++S S+ LL+ FY+TTL AL++AKNERLWFKTN KL K++FD+ E+ +
Sbjct: 107 KSINAILDYIS--TSRQMDLLQHFYETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTK 164
Query: 155 MSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXX---XXXXXXXXX 211
+ KI+K+L SC+ E G +DQ+KG+QLLE+YA+EIQMYTE
Sbjct: 165 LEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYELATQAIHT 224
Query: 212 XSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLAN 271
SAIPHP I+G IRECGGKMH+ + ++ DA TDFFEAFKNYDE+G+ RR CLKYLVLAN
Sbjct: 225 KSAIPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCLKYLVLAN 284
Query: 272 MLMESEVNPFDGQEAKP 288
ML++S++NPFD QEAKP
Sbjct: 285 MLIKSDINPFDSQEAKP 301
>UNIPROTKB|O01422 [details] [associations]
symbol:csn-2 "COP9 signalosome complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV EMBL:FO080100 PIR:T25440
RefSeq:NP_491740.1 ProteinModelPortal:O01422 SMR:O01422
DIP:DIP-24665N IntAct:O01422 MINT:MINT-1040695 STRING:O01422
PaxDb:O01422 PRIDE:O01422 EnsemblMetazoa:B0025.2.1
EnsemblMetazoa:B0025.2.2 EnsemblMetazoa:B0025.2.3 GeneID:172278
KEGG:cel:CELE_B0025.2 UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 145/257 (56%), Positives = 193/257 (75%)
Query: 35 ALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSE 94
A+ F +V+ +E EK EWGFKALKQ +K+ + + ++M++ YR++LTYIKSAVT+NYSE
Sbjct: 47 AIKSFEKVLELEGEKGEWGFKALKQMIKITFGQNRLEKMLEYYRQLLTYIKSAVTKNYSE 106
Query: 95 KCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGR 154
K IN I+D++S S+ LL+ FY+TTL AL++AKNERLWFKTN KL K++FD+ E+ +
Sbjct: 107 KSINAILDYIS--TSRQMDLLQHFYETTLDALKDAKNERLWFKTNTKLGKLFFDLHEFTK 164
Query: 155 MSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXX---XXXXXXXXX 211
+ KI+K+L SC+ E G +DQ+KG+QLLE+YA+EIQMYTE
Sbjct: 165 LEKIVKQLKVSCKNEQGEEDQRKGTQLLEIYALEIQMYTEQKNNKALKWVYELATQAIHT 224
Query: 212 XSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLAN 271
SAIPHP I+G IRECGGKMH+ + ++ DA TDFFEAFKNYDE+G+ RR CLKYLVLAN
Sbjct: 225 KSAIPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCLKYLVLAN 284
Query: 272 MLMESEVNPFDGQEAKP 288
ML++S++NPFD QEAKP
Sbjct: 285 MLIKSDINPFDSQEAKP 301
>POMBASE|SPAPB17E12.04c [details] [associations]
symbol:csn2 "COP9/signalosome complex subunit Csn2"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPAPB17E12.04c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006974 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV OrthoDB:EOG4PZNGN EMBL:AF314168 RefSeq:NP_001018220.1
ProteinModelPortal:Q9HFR0 IntAct:Q9HFR0 STRING:Q9HFR0
EnsemblFungi:SPAPB17E12.04c.1 GeneID:3361420
KEGG:spo:SPAPB17E12.04c NextBio:20811469 Uniprot:Q9HFR0
Length = 437
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 123/272 (45%), Positives = 172/272 (63%)
Query: 20 CSILEKGLVETDPEGALAGFAEVVAM-EPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYR 78
C K L E +PE AL F +V E E+ EW FKALKQ K+ ++L KY +M+ +Y+
Sbjct: 34 CYYNSKSLKEENPESALTSFYSIVEKCEGEQNEWAFKALKQITKINFQLKKYDDMLQSYQ 93
Query: 79 EMLTYIK-SAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFK 137
+L Y ++T+NYSEK I NI+++ S + +N L +FY T KAL+ NERL K
Sbjct: 94 RLLGYTNWLSITKNYSEKSIYNIVEYAS--SCENTEFLEKFYDVTTKALQNLNNERLMLK 151
Query: 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGT-DDQKKGSQLLEVYAIEIQMYTETX 196
+ + + Y + +L+++H+ E+ + DQ +G+ LLE+Y++EIQMY++
Sbjct: 152 VLMHVARFLLTQKNYHKFKYLLRQMHELLSDENNSVADQNRGTHLLELYSLEIQMYSDIE 211
Query: 197 XXXXXXXXXXXXXXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAG 256
+AIPHPRIMGIIRECGGKMHM E QW++A T+FFE+FK+YDEAG
Sbjct: 212 DNKRLKELYQSSLRVKTAIPHPRIMGIIRECGGKMHMQENQWSEAQTNFFESFKSYDEAG 271
Query: 257 NQRRIQCLKYLVLANMLMESEVNPFDGQEAKP 288
+ RI+ LKYLVLANML ESE+NPFD E +P
Sbjct: 272 SSDRIRVLKYLVLANMLSESEINPFDSPETQP 303
>CGD|CAL0004448 [details] [associations]
symbol:orf19.1400 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0004448 EMBL:AACQ01000101 EMBL:AACQ01000099 KO:K12176
RefSeq:XP_714571.1 RefSeq:XP_714665.1 GeneID:3643683 GeneID:3643813
KEGG:cal:CaO19.1400 KEGG:cal:CaO19.8978 eggNOG:NOG266353
Uniprot:Q59YC7
Length = 747
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 73/255 (28%), Positives = 123/255 (48%)
Query: 48 EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKS----AVTRNYSEKCINNIMDF 103
EK EW FK+ KQ +KLY+ ++ ++ +++ I ++Y E+ + +++
Sbjct: 100 EKYEWKFKSYKQLMKLYFDQQNFQLFLETLTQLIQLIPKFNHDGHYKSYIEESFSKMINR 159
Query: 104 VSGSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWFDMGEYGRMSKILKE 161
S SA N + + +FY T L L+ N RLWFK N+ L + D Y + +L++
Sbjct: 160 YSISA--NVTFVTQFYNTLLNYLDSNSNSSCRLWFKININLLNLHLDHQIYDDIPNLLQK 217
Query: 162 LHKSCQ-----REDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIP 216
++ +G + S L+ AIEI T+ S I
Sbjct: 218 VYSKLDIISNGGNNGCSETMLNSFKLQTIAIEIDYLTKINQFNLNLPRMNQLYRMSSKIT 277
Query: 217 ----HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANM 272
HPRI II +C G + + A +F+++F+NYDEAG+ + + LKY L ++
Sbjct: 278 TVVTHPRICAIINQCRGLIQFYRGNYHRANIEFYKSFQNYDEAGSTMKYKLLKYYALCSL 337
Query: 273 LMESEVNPFDGQEAK 287
L+ESE++PF QE +
Sbjct: 338 LIESELDPFQSQETQ 352
>UNIPROTKB|Q59YC7 [details] [associations]
symbol:CSN2 "Potential COP9 signalosome subunit CSN2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0004448 EMBL:AACQ01000101 EMBL:AACQ01000099 KO:K12176
RefSeq:XP_714571.1 RefSeq:XP_714665.1 GeneID:3643683 GeneID:3643813
KEGG:cal:CaO19.1400 KEGG:cal:CaO19.8978 eggNOG:NOG266353
Uniprot:Q59YC7
Length = 747
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 73/255 (28%), Positives = 123/255 (48%)
Query: 48 EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKS----AVTRNYSEKCINNIMDF 103
EK EW FK+ KQ +KLY+ ++ ++ +++ I ++Y E+ + +++
Sbjct: 100 EKYEWKFKSYKQLMKLYFDQQNFQLFLETLTQLIQLIPKFNHDGHYKSYIEESFSKMINR 159
Query: 104 VSGSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWFDMGEYGRMSKILKE 161
S SA N + + +FY T L L+ N RLWFK N+ L + D Y + +L++
Sbjct: 160 YSISA--NVTFVTQFYNTLLNYLDSNSNSSCRLWFKININLLNLHLDHQIYDDIPNLLQK 217
Query: 162 LHKSCQ-----REDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIP 216
++ +G + S L+ AIEI T+ S I
Sbjct: 218 VYSKLDIISNGGNNGCSETMLNSFKLQTIAIEIDYLTKINQFNLNLPRMNQLYRMSSKIT 277
Query: 217 ----HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANM 272
HPRI II +C G + + A +F+++F+NYDEAG+ + + LKY L ++
Sbjct: 278 TVVTHPRICAIINQCRGLIQFYRGNYHRANIEFYKSFQNYDEAGSTMKYKLLKYYALCSL 337
Query: 273 LMESEVNPFDGQEAK 287
L+ESE++PF QE +
Sbjct: 338 LIESELDPFQSQETQ 352
>FB|FBgn0028689 [details] [associations]
symbol:Rpn6 "Regulatory particle non-ATPase 6" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 EMBL:AE013599 GO:GO:0005875 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00530000063301 KO:K03036 OMA:SGILDQG EMBL:AF145309
EMBL:AF160939 EMBL:BT089015 RefSeq:NP_001246325.1
RefSeq:NP_477474.1 RefSeq:NP_725412.2 UniGene:Dm.3085 PDB:3TXM
PDB:3TXN PDBsum:3TXM PDBsum:3TXN ProteinModelPortal:Q7KLV9
SMR:Q7KLV9 IntAct:Q7KLV9 STRING:Q7KLV9 PRIDE:Q7KLV9
EnsemblMetazoa:FBtr0087475 EnsemblMetazoa:FBtr0306558 GeneID:36638
KEGG:dme:Dmel_CG10149 UCSC:CG10149-RB CTD:36638 FlyBase:FBgn0028689
InParanoid:Q7KLV9 GenomeRNAi:36638 NextBio:799626 Bgee:Q7KLV9
Uniprot:Q7KLV9
Length = 422
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 54/234 (23%), Positives = 109/234 (46%)
Query: 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFS 113
+ + Q +LY + GK KE+ D + ++ S++++ + K + +++D F+ A
Sbjct: 48 QGILQQGELYKQEGKAKELADLIKVTRPFL-SSISKAKAAKLVRSLVDMFLDMDAGTGIE 106
Query: 114 LLREFYQTTLKALEEAKNE-RLWFKTNL--KLCKIWFDMGEYGRMSKILKELHKSCQRED 170
+ Q +E AK E R + + +L +L ++FD Y + +L + ++
Sbjct: 107 V-----QLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKK-- 159
Query: 171 GTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECG 228
DD+ + L+EV +E + Y +AI P P++ G +
Sbjct: 160 -LDDK---NLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PKVQGALDLQS 214
Query: 229 GKMHMA-ERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM--ESEVN 279
G +H A ER + A + F+EAF+ +D + + + LKY++L +++ +VN
Sbjct: 215 GILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQSDDVN 268
>DICTYBASE|DDB_G0281315 [details] [associations]
symbol:psmD11 "26S proteasome non-ATPase regulatory
subunit 11" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0281315 GenomeReviews:CM000152_GR
EMBL:AAFI02000040 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006972 GO:GO:0004175 Gene3D:1.25.40.10 GO:GO:0006511
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159 GO:GO:0005838
KO:K03036 OMA:SGILDQG RefSeq:XP_640861.1 STRING:Q54UB5 PRIDE:Q54UB5
EnsemblProtists:DDB0232994 GeneID:8622917 KEGG:ddi:DDB_G0281315
ProtClustDB:CLSZ2729047 Uniprot:Q54UB5
Length = 413
Score = 139 (54.0 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 47/245 (19%), Positives = 105/245 (42%)
Query: 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTR 90
D A+ + +++ ++ + +A+ + KL+ ++GK ++ R + + +++
Sbjct: 15 DSNKAIQDYNKILTIQESPDDIKEEAILRLAKLFVKIGKGDQLPTLLRSVRPFFDK-ISK 73
Query: 91 NYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMG 150
++K + N +D S + N + L EF + ++ ++ L + KL + F+
Sbjct: 74 PKTDKIVRNFIDIFS-TVPDNLTTLIEFVKENIQWCKDTNRIYLRQRLETKLFTLMFEAK 132
Query: 151 EYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE--IQMYTETXXXXXXXXXXXXX 208
+Y L L +R DD+ L+E+ +E IQ +
Sbjct: 133 DYANALSGLTTLLTEIKR---LDDKPL---LVEIQLVESRIQHALKNIPKARAALTSART 186
Query: 209 XXXXSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLV 268
P P++ I G +H E+ + A + FFE+++ YD + ++ LKY++
Sbjct: 187 NANTIYCP-PKLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMKALKYML 245
Query: 269 LANML 273
L ++
Sbjct: 246 LCKIM 250
>ZFIN|ZDB-GENE-030131-984 [details] [associations]
symbol:psmd11b "proteasome (prosome, macropain)
216S subunit, non-ATPase, 11b" species:7955 "Danio rerio"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0048863 "stem cell differentiation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 ZFIN:ZDB-GENE-030131-984 GO:GO:0005829
GO:GO:0005634 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00530000063301 GO:GO:0022624 KO:K03036
EMBL:CR391936 EMBL:BC051618 EMBL:BC063978 IPI:IPI00507762
RefSeq:NP_955886.1 UniGene:Dr.30259 Ensembl:ENSDART00000016283
GeneID:322265 KEGG:dre:322265 CTD:322265 NextBio:20807740
ArrayExpress:F1QGH9 Bgee:F1QGH9 Uniprot:F1QGH9
Length = 422
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 55/262 (20%), Positives = 117/262 (44%)
Query: 25 KGLVETDPEGALAGFAEVVAME-PEKAEWGFKALKQTV----KLYYRLGKYKEMMDAYRE 79
+ L+ TD ++ F +V + E E + +Q++ L + G+ E+ +
Sbjct: 13 QSLISTDRNASIDIFHSIVRRDVQEDDEEAVRVKEQSILELGSLLAKTGQAAELGGLLKF 72
Query: 80 MLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-- 136
+ ++ S +++ + + + +++D F+ A+ + + L+ +E AK E+ F
Sbjct: 73 VRPFLIS-ISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKAEKRTFLR 126
Query: 137 -KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTET 195
+L ++FD Y ++ +L + ++ DD+ + L+EV +E + Y
Sbjct: 127 QALEARLISLYFDTKRYQEALQLESQLLQELKK---MDDK---ALLVEVQLLESKTYHAL 180
Query: 196 XXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEAFKNY 252
+AI P P++ + G +H AE + W A + FFEAF+ Y
Sbjct: 181 SNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEKDWKTAYSYFFEAFEGY 239
Query: 253 DEAGNQRRIQCLKYLVLANMLM 274
D + R + LKY++L +++
Sbjct: 240 DSIDSPRAVTALKYMLLCKIML 261
>UNIPROTKB|Q2KI42 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 GeneTree:ENSGT00530000063301
GO:GO:0022624 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG
EMBL:BT029888 EMBL:DAAA02048509 EMBL:DAAA02048510 EMBL:BC112777
IPI:IPI00716714 RefSeq:NP_001039613.1 UniGene:Bt.2394
ProteinModelPortal:Q2KI42 SMR:Q2KI42 STRING:Q2KI42 PRIDE:Q2KI42
Ensembl:ENSBTAT00000025152 Ensembl:ENSBTAT00000054679 GeneID:513461
KEGG:bta:513461 CTD:5717 HOVERGEN:HBG053738 InParanoid:Q2KI42
OrthoDB:EOG41RPV3 NextBio:20870863 ArrayExpress:Q2KI42
Uniprot:Q2KI42
Length = 422
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/268 (21%), Positives = 120/268 (44%)
Query: 25 KGLVETDPEGALAGFAEVVAME-PEKAEWGFKALKQTV----KLYYRLGKYKEMMDAYRE 79
+ L+ TD E ++ +V + E E + +Q++ L + G+ E+ +
Sbjct: 13 QSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKY 72
Query: 80 MLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-- 136
+ ++ S +++ + + + +++D F+ A+ + + L+ +E AK+E+ F
Sbjct: 73 VRPFLNS-ISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRTFLR 126
Query: 137 -KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191
+L ++FD Y S++L+EL K DD+ + L+EV +E +
Sbjct: 127 QALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLESKT 176
Query: 192 YTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEA 248
Y +AI P P++ + G +H AE + W A + F+EA
Sbjct: 177 YHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
Query: 249 FKNYDEAGNQRRIQCLKYLVLANMLMES 276
F+ YD + + I LKY++L +++ +
Sbjct: 236 FEGYDSIDSPKAITSLKYMLLCKIMLNT 263
>UNIPROTKB|E2RJ26 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0043248 "proteasome assembly" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00530000063301 KO:K03036 OMA:SGILDQG CTD:5717
EMBL:AAEX03006642 RefSeq:XP_537730.2 ProteinModelPortal:E2RJ26
Ensembl:ENSCAFT00000029207 GeneID:480610 KEGG:cfa:480610
Uniprot:E2RJ26
Length = 422
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/268 (21%), Positives = 120/268 (44%)
Query: 25 KGLVETDPEGALAGFAEVVAME-PEKAEWGFKALKQTV----KLYYRLGKYKEMMDAYRE 79
+ L+ TD E ++ +V + E E + +Q++ L + G+ E+ +
Sbjct: 13 QSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKY 72
Query: 80 MLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-- 136
+ ++ S +++ + + + +++D F+ A+ + + L+ +E AK+E+ F
Sbjct: 73 VRPFLNS-ISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRTFLR 126
Query: 137 -KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191
+L ++FD Y S++L+EL K DD+ + L+EV +E +
Sbjct: 127 QALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLESKT 176
Query: 192 YTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEA 248
Y +AI P P++ + G +H AE + W A + F+EA
Sbjct: 177 YHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
Query: 249 FKNYDEAGNQRRIQCLKYLVLANMLMES 276
F+ YD + + I LKY++L +++ +
Sbjct: 236 FEGYDSIDSPKAITSLKYMLLCKIMLNT 263
>UNIPROTKB|O00231 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0043248 "proteasome assembly" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0044281 GO:GO:0000082 GO:GO:0048863
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0051436 GO:GO:0043248 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 EMBL:CH471147
GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 GO:GO:0022624 KO:K03036 OMA:SGILDQG CTD:5717
HOVERGEN:HBG053738 OrthoDB:EOG41RPV3 EMBL:AF001212 EMBL:AB003102
EMBL:AK290602 EMBL:AK223196 EMBL:BC000437 EMBL:BC004430
IPI:IPI00105598 PIR:JC6524 RefSeq:NP_001257411.1 RefSeq:NP_002806.2
UniGene:Hs.443379 ProteinModelPortal:O00231 SMR:O00231
IntAct:O00231 MINT:MINT-1154929 STRING:O00231 PhosphoSite:O00231
OGP:O00231 PaxDb:O00231 PRIDE:O00231 Ensembl:ENST00000261712
Ensembl:ENST00000457654 GeneID:5717 KEGG:hsa:5717 UCSC:uc002hhm.3
GeneCards:GC17P030771 HGNC:HGNC:9556 HPA:HPA042275 MIM:604449
neXtProt:NX_O00231 PharmGKB:PA33902 InParanoid:O00231
PhylomeDB:O00231 GenomeRNAi:5717 NextBio:22212 ArrayExpress:O00231
Bgee:O00231 CleanEx:HS_PSMD11 Genevestigator:O00231
GermOnline:ENSG00000108671 Uniprot:O00231
Length = 422
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/268 (21%), Positives = 120/268 (44%)
Query: 25 KGLVETDPEGALAGFAEVVAME-PEKAEWGFKALKQTV----KLYYRLGKYKEMMDAYRE 79
+ L+ TD E ++ +V + E E + +Q++ L + G+ E+ +
Sbjct: 13 QSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKY 72
Query: 80 MLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-- 136
+ ++ S +++ + + + +++D F+ A+ + + L+ +E AK+E+ F
Sbjct: 73 VRPFLNS-ISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRTFLR 126
Query: 137 -KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191
+L ++FD Y S++L+EL K DD+ + L+EV +E +
Sbjct: 127 QALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLESKT 176
Query: 192 YTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEA 248
Y +AI P P++ + G +H AE + W A + F+EA
Sbjct: 177 YHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
Query: 249 FKNYDEAGNQRRIQCLKYLVLANMLMES 276
F+ YD + + I LKY++L +++ +
Sbjct: 236 FEGYDSIDSPKAITSLKYMLLCKIMLNT 263
>MGI|MGI:1916327 [details] [associations]
symbol:Psmd11 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0022624 "proteasome accessory complex"
evidence=ISO;IDA] [GO:0043248 "proteasome assembly" evidence=ISO]
[GO:0048863 "stem cell differentiation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1916327 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 GeneTree:ENSGT00530000063301
GO:GO:0022624 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG CTD:5717
HOVERGEN:HBG053738 OrthoDB:EOG41RPV3 EMBL:AK051738 EMBL:AK089942
IPI:IPI00222515 RefSeq:NP_848731.2 UniGene:Mm.260539
ProteinModelPortal:Q8BG32 SMR:Q8BG32 IntAct:Q8BG32 STRING:Q8BG32
PhosphoSite:Q8BG32 PaxDb:Q8BG32 PRIDE:Q8BG32
Ensembl:ENSMUST00000017572 Ensembl:ENSMUST00000173938 GeneID:69077
KEGG:mmu:69077 InParanoid:Q8BG32 NextBio:328550 Bgee:Q8BG32
Genevestigator:Q8BG32 GermOnline:ENSMUSG00000017428 Uniprot:Q8BG32
Length = 422
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/268 (21%), Positives = 120/268 (44%)
Query: 25 KGLVETDPEGALAGFAEVVAME-PEKAEWGFKALKQTV----KLYYRLGKYKEMMDAYRE 79
+ L+ TD E ++ +V + E E + +Q++ L + G+ E+ +
Sbjct: 13 QSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKY 72
Query: 80 MLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-- 136
+ ++ S +++ + + + +++D F+ A+ + + L+ +E AK+E+ F
Sbjct: 73 VRPFLNS-ISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRTFLR 126
Query: 137 -KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191
+L ++FD Y S++L+EL K DD+ + L+EV +E +
Sbjct: 127 QALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLESKT 176
Query: 192 YTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEA 248
Y +AI P P++ + G +H AE + W A + F+EA
Sbjct: 177 YHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
Query: 249 FKNYDEAGNQRRIQCLKYLVLANMLMES 276
F+ YD + + I LKY++L +++ +
Sbjct: 236 FEGYDSIDSPKAITSLKYMLLCKIMLNT 263
>RGD|1306450 [details] [associations]
symbol:Psmd11 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISO;ISS] [GO:0043248 "proteasome assembly"
evidence=ISO;ISS] [GO:0048863 "stem cell differentiation"
evidence=ISO;ISS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 RGD:1306450 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 OMA:SGILDQG IPI:IPI00765842
ProteinModelPortal:F1LMZ8 PRIDE:F1LMZ8 ArrayExpress:F1LMZ8
Uniprot:F1LMZ8
Length = 422
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/268 (21%), Positives = 120/268 (44%)
Query: 25 KGLVETDPEGALAGFAEVVAME-PEKAEWGFKALKQTV----KLYYRLGKYKEMMDAYRE 79
+ L+ TD E ++ +V + E E + +Q++ L + G+ E+ +
Sbjct: 13 QSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKY 72
Query: 80 MLTYIKSAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-- 136
+ ++ S +++ + + + +++D F+ A+ + + L+ +E AK+E+ F
Sbjct: 73 VRPFLNS-ISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRTFLR 126
Query: 137 -KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191
+L ++FD Y S++L+EL K DD+ + L+EV +E +
Sbjct: 127 QALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLESKT 176
Query: 192 YTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEA 248
Y +AI P P++ + G +H AE + W A + F+EA
Sbjct: 177 YHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYFYEA 235
Query: 249 FKNYDEAGNQRRIQCLKYLVLANMLMES 276
F+ YD + + I LKY++L +++ +
Sbjct: 236 FEGYDSIDSPKAITSLKYMLLCKIMLNT 263
>ZFIN|ZDB-GENE-030131-2711 [details] [associations]
symbol:psmd11a "proteasome (prosome, macropain)
216S subunit, non-ATPase, 11a" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0022624
"proteasome accessory complex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048863 "stem cell differentiation" evidence=ISS] [GO:0043248
"proteasome assembly" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-2711 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00530000063301 GO:GO:0022624 KO:K03036
EMBL:BC124767 EMBL:BX890565 IPI:IPI00613161 RefSeq:NP_001159710.1
UniGene:Dr.76962 PRIDE:F6P3G4 Ensembl:ENSDART00000084448
GeneID:503934 KEGG:dre:503934 CTD:503934 NextBio:20866384
ArrayExpress:F6P3G4 Bgee:F6P3G4 Uniprot:F6P3G4
Length = 421
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 45/207 (21%), Positives = 97/207 (46%)
Query: 80 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 135
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 68 LLKYVRPFLNSISKAKAARLVRSLLDMFLDMEAATGQEV-----ELCLECIEWAKSEKRT 122
Query: 136 F---KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 192
F +L ++FD Y ++ +L + ++ DD+ + L+E+ +E + Y
Sbjct: 123 FLRQALEARLVSLYFDTKRYQEALQLGSQLLQELKK---MDDK---ALLVELQLLESKTY 176
Query: 193 TETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEAF 249
+AI P P++ + G +H AE + W A + F+EAF
Sbjct: 177 HALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAF 235
Query: 250 KNYDEAGNQRRIQCLKYLVLANMLMES 276
+ YD + R I LKY++L +++ S
Sbjct: 236 EGYDSIDSPRAITALKYMLLCKIMLNS 262
>UNIPROTKB|F1RKW8 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
InterPro:IPR013143 SMART:SM00753 GeneTree:ENSGT00530000063301
OMA:SGILDQG EMBL:CU463935 EMBL:CU695029 Ensembl:ENSSSCT00000019298
Uniprot:F1RKW8
Length = 392
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 80 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 135
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK+E+
Sbjct: 39 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKSEKRT 93
Query: 136 F---KTNLKLCKIWFDMGEYGRM----SKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188
F +L ++FD Y S++L+EL K DD+ + L+EV +E
Sbjct: 94 FLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKM-------DDK---ALLVEVQLLE 143
Query: 189 IQMYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDF 245
+ Y +AI P P++ + G +H AE + W A + F
Sbjct: 144 SKTYHALSNLPKARAALTSARTTANAIYCP-PKLQATLDMQSGIIHAAEEKDWKTAYSYF 202
Query: 246 FEAFKNYDEAGNQRRIQCLKYLVLANMLMES 276
+EAF+ YD + + I LKY++L +++ +
Sbjct: 203 YEAFEGYDSIDSPKAITSLKYMLLCKIMLNT 233
>UNIPROTKB|P68353 [details] [associations]
symbol:CSN2 "COP9 signalosome complex subunit 2"
species:3712 "Brassica oleracea" [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0007275 GO:GO:0005737 GO:GO:0009585
GO:GO:0008180 IntAct:P68353 Uniprot:P68353
Length = 39
Score = 64 (27.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 250 KNYDEAGNQRRIQ 262
KNYD AGNQRRIQ
Sbjct: 20 KNYDHAGNQRRIQ 32
Score = 54 (24.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 85 KSAVTRNYSEK 95
KSAVTRNYSEK
Sbjct: 1 KSAVTRNYSEK 11
>TAIR|locus:2030017 [details] [associations]
symbol:ATS9 "AT1G29150" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506
GO:GO:0005634 GO:GO:0046686 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030163 GO:GO:0000502 EMBL:AC021043 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000210093 KO:K03036
OMA:SGILDQG EMBL:AF083890 EMBL:AY230834 EMBL:AY230835 EMBL:AY230836
EMBL:AY230837 EMBL:AF370203 EMBL:AY056311 IPI:IPI00521338
PIR:A86414 PIR:T52033 RefSeq:NP_174210.1 UniGene:At.21249
ProteinModelPortal:Q9LP45 SMR:Q9LP45 IntAct:Q9LP45 STRING:Q9LP45
PRIDE:Q9LP45 EnsemblPlants:AT1G29150.1 GeneID:839789
KEGG:ath:AT1G29150 TAIR:At1g29150 InParanoid:Q9LP45
PhylomeDB:Q9LP45 ProtClustDB:CLSN2679678 Genevestigator:Q9LP45
Uniprot:Q9LP45
Length = 419
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 56/250 (22%), Positives = 106/250 (42%)
Query: 43 VAMEPEKAEWGFKALKQTV-KLYYRLGKYKEMMDAYREMLTYIK---SAVTRNYSEKCIN 98
V +P + + +Q + L RL + K D R++LT ++ S + + + K +
Sbjct: 29 VLEDPSSSPEAIRIKEQAITNLCDRLTEEKRGEDL-RKLLTKLRPFFSLIPKAKTAKIVR 87
Query: 99 NIMDFVS---GSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRM 155
I+D V+ G+ +L +E + T K L + +L + + EY
Sbjct: 88 GIIDAVAKIPGTTDLQITLCKEMVEWT----RAEKRTFLRQRVEARLAALLMENKEYVEA 143
Query: 156 SKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAI 215
+L L K +R DD+ L+++ +E +++ +AI
Sbjct: 144 LALLSTLVKEVRR---LDDKLL---LVDIDLLESKLHFSLRNLPKAKAALTAARTAANAI 197
Query: 216 --PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANML 273
P P G I G +H E+ + + FFEAF++++ G+ R + LKY++L +
Sbjct: 198 YVP-PAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVFSLKYMLLCK-I 255
Query: 274 MESEVNPFDG 283
M S+ + G
Sbjct: 256 MVSQADDVAG 265
>UNIPROTKB|F6XBL2 [details] [associations]
symbol:psmd11 "26S proteasome non-ATPase regulatory subunit
11" species:8364 "Xenopus (Silurana) tropicalis" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0043248 "proteasome assembly" evidence=ISS] [GO:0048863 "stem
cell differentiation" evidence=ISS] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
GO:GO:0005634 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 KO:K03036 EMBL:AAMC01047365
RefSeq:XP_002935612.1 GeneID:100492225 KEGG:xtr:100492225
Xenbase:XB-GENE-922608 Bgee:F6XBL2 Uniprot:F6XBL2
Length = 422
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 43/207 (20%), Positives = 95/207 (45%)
Query: 80 MLTYIK---SAVTRNYSEKCINNIMD-FVSGSASQNFSLLREFYQTTLKALEEAKNERLW 135
+L Y++ +++++ + + + +++D F+ A+ + + L+ +E AK E+
Sbjct: 69 LLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEV-----ELCLECIEWAKAEKRT 123
Query: 136 F---KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY 192
F +L ++FD Y ++ +L + ++ DD+ + L+EV +E + Y
Sbjct: 124 FLRQALEARLVSLYFDTKRYQEALQLGSQLLRELKK---MDDK---ALLVEVQLLESKTY 177
Query: 193 TETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAE-RQWADAATDFFEAF 249
+AI P P++ + G +H AE + W A + F+EAF
Sbjct: 178 HALSNLPKARAALTSARTTANAIYCP-PKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAF 236
Query: 250 KNYDEAGNQRRIQCLKYLVLANMLMES 276
+ D + + I LKY++L +++ +
Sbjct: 237 EGNDSIDSPKAITALKYMLLCKIMLNT 263
>CGD|CAL0003109 [details] [associations]
symbol:RPN6 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 CGD:CAL0003109 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 InterPro:IPR013143
SMART:SM00753 EMBL:AACQ01000138 KO:K03036 RefSeq:XP_709940.1
ProteinModelPortal:Q59TR9 STRING:Q59TR9 GeneID:3645352
KEGG:cal:CaO19.1299 Uniprot:Q59TR9
Length = 435
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 48/231 (20%), Positives = 103/231 (44%)
Query: 56 ALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIM-DFVSGSASQNFSL 114
A+ + K+Y L + ++ D + + + + ++ + K + ++ DF SA SL
Sbjct: 59 AILELGKIYETLNEPTKLSDLIADSRSILGN-FAKSKTAKIVKTLIEDFDKLSAKDEKSL 117
Query: 115 LREFYQTTLKALEEAKNERLWF---KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG 171
+ T +++ A +L F LKL + + + KI+ EL + ++
Sbjct: 118 DIQI-DVTKSSMQWAIESKLSFLRQSLQLKLSDLLYQKKHHHEAIKIINELLREYKK--- 173
Query: 172 TDDQKKGSQLLEVYAIEIQMYTETXXXXXXXXXXXXXXXXXSAIPHPRIMGIIREC-GGK 230
DD+ S L+EV +E ++Y ++I P I+ +C G
Sbjct: 174 LDDK---SSLVEVQLLESKIYHALRNIPKAKAALTSARTSANSIYCPTILQAELDCQSGI 230
Query: 231 MHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLME--SEVN 279
++ ++ + A + F+E+F+ ++ + R I LKY++L +++ +VN
Sbjct: 231 LNSEDKDYKTAFSYFYESFEGFNSQDDPRSIIVLKYMLLTKIMLNLIDDVN 281
>POMBASE|SPAC23G3.11 [details] [associations]
symbol:rpn6 "19S proteasome regulatory subunit Rpn6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 PomBase:SPAC23G3.11 GO:GO:0005829 GO:GO:0005634
GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0006511 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GO:GO:0008540 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG PIR:T50185
RefSeq:NP_593111.1 ProteinModelPortal:Q9P7S2 IntAct:Q9P7S2
STRING:Q9P7S2 PRIDE:Q9P7S2 EnsemblFungi:SPAC23G3.11.1
GeneID:2541807 KEGG:spo:SPAC23G3.11 OrthoDB:EOG4K3Q51
NextBio:20802895 Uniprot:Q9P7S2
Length = 421
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 53/269 (19%), Positives = 113/269 (42%)
Query: 16 SRVLCSILEKGLVETDPEGALAGFAEV----VAMEPEKAEWGFKALKQTVKLYYRLGKYK 71
S+ + + D E A+ + EV V+ + + A +AL LY R ++
Sbjct: 3 SKSSLELANNAVKSNDIEKAIDLYKEVLNKGVSKDEKVANEQEQALTNLSDLYVRENRHN 62
Query: 72 EMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLK-ALEEAK 130
++ ++ + + ++ S K + ++D SG ++ L E +K A++E K
Sbjct: 63 DLAQLVQQSRPLMAN-FSKAKSAKIVRTLIDKFSGE-KKSLPLQIEVANDCIKWAIKE-K 119
Query: 131 NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQ 190
L KL +++D Y ++ L +R DD+ L EV+ +E +
Sbjct: 120 RTFLRQALETKLISLYYDNSSYTDAINLINTLLSELKR---MDDKML---LTEVHLLESK 173
Query: 191 MYTETXXXXXXXXXXXXXXXXXSAI--PHPRIMGIIRECGGKMHMAERQWADAATDFFEA 248
+Y +A+ P P + G + G +H + + A + F+EA
Sbjct: 174 VYHAIRNIPKARASLTAAKTSANAVYCP-PMLQGNLDLQSGILHADDMDFKTAYSYFYEA 232
Query: 249 FKNYDEAGNQRR-IQCLKYLVLANMLMES 276
++ + + ++ + LKY++L+ +++ S
Sbjct: 233 YEGFTSLDDDKKALSSLKYMLLSQIMLNS 261
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 288 271 0.00098 114 3 11 22 0.46 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 610 (65 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.91u 0.19s 23.10t Elapsed: 00:00:01
Total cpu time: 22.92u 0.19s 23.11t Elapsed: 00:00:01
Start: Sat May 11 07:58:38 2013 End: Sat May 11 07:58:39 2013