Query 023037
Match_columns 288
No_of_seqs 118 out of 331
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:16:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3txn_A 26S proteasome regulato 100.0 1.3E-52 4.4E-57 401.9 19.7 227 48-285 13-246 (394)
2 4b4t_Q 26S proteasome regulato 100.0 1.1E-31 3.7E-36 250.9 24.6 254 22-286 9-287 (434)
3 4b4t_P 26S proteasome regulato 100.0 2.4E-28 8.3E-33 237.2 17.2 245 19-275 19-272 (445)
4 4b4t_R RPN7, 26S proteasome re 99.8 2.4E-19 8.2E-24 173.0 11.8 255 16-286 8-276 (429)
5 3sf4_A G-protein-signaling mod 99.6 8.7E-13 3E-17 120.0 27.3 239 13-259 5-264 (406)
6 3ro2_A PINS homolog, G-protein 99.6 1.2E-12 4E-17 114.8 26.7 232 20-259 8-260 (338)
7 3sf4_A G-protein-signaling mod 99.6 1.4E-12 4.8E-17 118.6 24.7 239 29-275 100-361 (406)
8 3ro2_A PINS homolog, G-protein 99.6 7E-13 2.4E-17 116.3 21.5 140 112-257 199-338 (338)
9 4a1s_A PINS, partner of inscut 99.5 3.5E-12 1.2E-16 117.4 26.5 230 21-258 52-299 (411)
10 3ulq_A Response regulator aspa 99.5 2.5E-12 8.6E-17 118.7 25.1 201 28-237 115-318 (383)
11 4a1s_A PINS, partner of inscut 99.5 1.2E-11 4E-16 113.9 25.5 222 29-258 99-339 (411)
12 3q15_A PSP28, response regulat 99.5 1.1E-11 3.7E-16 114.7 24.0 188 28-224 113-303 (378)
13 3q15_A PSP28, response regulat 99.4 3.9E-11 1.3E-15 110.8 23.2 211 54-275 101-312 (378)
14 3edt_B KLC 2, kinesin light ch 99.4 6.4E-11 2.2E-15 101.8 21.4 220 27-252 12-282 (283)
15 3ulq_A Response regulator aspa 99.4 9.4E-11 3.2E-15 108.1 23.2 207 59-276 108-316 (383)
16 3gw4_A Uncharacterized protein 99.4 2.2E-10 7.6E-15 94.8 22.0 183 27-260 3-185 (203)
17 3nf1_A KLC 1, kinesin light ch 99.4 3E-10 1E-14 99.4 23.3 219 28-252 39-308 (311)
18 2ifu_A Gamma-SNAP; membrane fu 99.3 2.5E-10 8.6E-15 103.2 22.8 214 30-253 5-225 (307)
19 3ro3_A PINS homolog, G-protein 99.3 4.5E-10 1.5E-14 88.0 18.2 159 51-257 6-164 (164)
20 1qqe_A Vesicular transport pro 99.3 6.6E-10 2.2E-14 99.7 21.3 198 14-217 33-234 (292)
21 3u3w_A Transcriptional activat 99.3 3.6E-10 1.2E-14 101.1 19.1 201 53-261 74-276 (293)
22 3nf1_A KLC 1, kinesin light ch 99.2 6.7E-09 2.3E-13 90.7 24.5 196 53-254 26-227 (311)
23 3u3w_A Transcriptional activat 99.2 6.5E-10 2.2E-14 99.3 18.1 196 27-230 86-285 (293)
24 1qqe_A Vesicular transport pro 99.2 9.1E-09 3.1E-13 92.2 25.4 196 54-257 37-234 (292)
25 2qfc_A PLCR protein; TPR, HTH, 99.2 1.6E-09 5.5E-14 96.8 18.9 199 54-260 75-275 (293)
26 2ifu_A Gamma-SNAP; membrane fu 99.1 1E-08 3.5E-13 92.5 21.3 192 16-217 34-229 (307)
27 3uq3_A Heat shock protein STI1 99.1 7.5E-08 2.6E-12 81.6 25.1 212 28-265 17-251 (258)
28 2qfc_A PLCR protein; TPR, HTH, 99.1 6.7E-09 2.3E-13 92.7 19.0 187 28-222 87-277 (293)
29 1fch_A Peroxisomal targeting s 99.1 3.1E-08 1E-12 89.1 22.0 225 28-275 76-344 (368)
30 4eqf_A PEX5-related protein; a 99.0 2.4E-08 8.3E-13 90.4 20.7 104 136-257 213-316 (365)
31 3hym_B Cell division cycle pro 99.0 2.6E-08 8.9E-13 87.6 20.3 195 31-252 106-300 (330)
32 3u4t_A TPR repeat-containing p 99.0 1.9E-08 6.4E-13 86.8 18.9 207 29-265 50-262 (272)
33 1hz4_A MALT regulatory protein 99.0 2.2E-07 7.7E-12 84.6 26.1 213 28-250 26-243 (373)
34 4b4t_O 26S proteasome regulato 99.0 2.4E-09 8.3E-14 102.0 11.9 183 95-284 5-233 (393)
35 3ieg_A DNAJ homolog subfamily 99.0 1.6E-07 5.5E-12 83.1 22.3 204 28-262 132-344 (359)
36 3edt_B KLC 2, kinesin light ch 99.0 1.1E-07 3.8E-12 81.3 20.4 184 65-254 12-201 (283)
37 4eqf_A PEX5-related protein; a 99.0 1.1E-07 3.6E-12 86.1 21.0 195 28-252 77-277 (365)
38 3qky_A Outer membrane assembly 98.9 1.7E-07 5.7E-12 81.6 21.3 198 19-267 17-238 (261)
39 3ieg_A DNAJ homolog subfamily 98.9 2.8E-07 9.5E-12 81.6 22.2 204 29-251 84-301 (359)
40 2pl2_A Hypothetical conserved 98.9 1.9E-07 6.5E-12 79.9 20.1 194 28-248 17-211 (217)
41 1hz4_A MALT regulatory protein 98.9 4.7E-07 1.6E-11 82.4 23.6 202 49-258 9-210 (373)
42 3hym_B Cell division cycle pro 98.9 2E-07 6.8E-12 81.9 20.0 104 137-252 160-266 (330)
43 3vtx_A MAMA; tetratricopeptide 98.9 1.1E-07 3.6E-12 78.0 17.0 155 28-212 17-171 (184)
44 2y4t_A DNAJ homolog subfamily 98.9 9.6E-07 3.3E-11 81.6 25.5 202 29-251 107-324 (450)
45 4b4t_Q 26S proteasome regulato 98.9 2E-07 7E-12 86.1 20.8 207 59-274 9-227 (434)
46 2q7f_A YRRB protein; TPR, prot 98.9 1.6E-07 5.5E-12 79.2 18.0 204 22-263 28-232 (243)
47 3gw4_A Uncharacterized protein 98.9 9.8E-08 3.4E-12 78.6 16.2 159 28-233 38-198 (203)
48 3cv0_A Peroxisome targeting si 98.9 5.6E-07 1.9E-11 78.9 21.8 205 28-255 33-273 (327)
49 3vtx_A MAMA; tetratricopeptide 98.9 2E-07 6.8E-12 76.3 17.7 167 54-252 5-171 (184)
50 2xpi_A Anaphase-promoting comp 98.9 2.1E-07 7.2E-12 89.5 20.6 210 29-274 386-595 (597)
51 2ho1_A Type 4 fimbrial biogene 98.9 3.4E-07 1.2E-11 78.1 19.8 191 28-252 49-239 (252)
52 2vq2_A PILW, putative fimbrial 98.9 5.6E-07 1.9E-11 74.5 20.5 201 28-262 20-220 (225)
53 3ro3_A PINS homolog, G-protein 98.8 1E-07 3.4E-12 74.4 14.6 122 131-258 4-125 (164)
54 1xnf_A Lipoprotein NLPI; TPR, 98.8 5.6E-07 1.9E-11 77.2 20.0 198 28-252 17-245 (275)
55 2y4t_A DNAJ homolog subfamily 98.8 7.3E-07 2.5E-11 82.4 21.6 195 29-252 156-359 (450)
56 3fp2_A TPR repeat-containing p 98.8 2.7E-07 9.2E-12 87.2 18.6 193 28-251 255-457 (537)
57 3u4t_A TPR repeat-containing p 98.8 3.9E-07 1.3E-11 78.4 18.1 198 28-258 15-215 (272)
58 3fp2_A TPR repeat-containing p 98.8 2.3E-07 7.8E-12 87.7 17.6 223 28-282 288-520 (537)
59 2xpi_A Anaphase-promoting comp 98.8 7E-07 2.4E-11 85.8 20.9 199 28-252 317-546 (597)
60 2gw1_A Mitochondrial precursor 98.8 2.7E-07 9.1E-12 86.4 17.3 124 137-274 373-499 (514)
61 1fch_A Peroxisomal targeting s 98.8 1.2E-06 4E-11 78.7 20.8 200 28-252 37-281 (368)
62 3as5_A MAMA; tetratricopeptide 98.7 1.2E-06 4E-11 70.0 17.7 156 28-253 20-175 (186)
63 4i17_A Hypothetical protein; T 98.7 1.2E-06 4.1E-11 74.2 18.1 167 28-251 19-209 (228)
64 3uq3_A Heat shock protein STI1 98.7 7.6E-06 2.6E-10 69.0 23.1 185 53-252 4-203 (258)
65 2gw1_A Mitochondrial precursor 98.7 6.3E-07 2.2E-11 83.8 17.2 194 28-252 249-445 (514)
66 1ouv_A Conserved hypothetical 98.7 5.3E-06 1.8E-10 72.2 21.5 179 29-251 19-215 (273)
67 1ouv_A Conserved hypothetical 98.7 4.1E-06 1.4E-10 72.9 20.7 187 29-263 55-259 (273)
68 1w3b_A UDP-N-acetylglucosamine 98.7 9.4E-07 3.2E-11 80.7 17.1 193 28-250 147-367 (388)
69 1w3b_A UDP-N-acetylglucosamine 98.6 3E-06 1E-10 77.3 19.9 198 28-252 113-335 (388)
70 3cv0_A Peroxisome targeting si 98.6 1E-06 3.4E-11 77.3 14.7 168 63-256 147-320 (327)
71 4i17_A Hypothetical protein; T 98.6 3.4E-06 1.2E-10 71.4 17.2 142 28-224 54-223 (228)
72 2yhc_A BAMD, UPF0169 lipoprote 98.6 1.6E-05 5.4E-10 68.0 20.8 181 20-211 7-213 (225)
73 2vq2_A PILW, putative fimbrial 98.5 1.1E-05 3.7E-10 66.6 18.3 170 53-252 7-177 (225)
74 2ho1_A Type 4 fimbrial biogene 98.5 1.5E-05 5.2E-10 67.7 19.0 170 53-252 36-205 (252)
75 2yhc_A BAMD, UPF0169 lipoprote 98.5 1.5E-05 5.2E-10 68.0 19.1 168 52-275 2-198 (225)
76 4gcn_A Protein STI-1; structur 98.5 4E-06 1.4E-10 65.9 14.3 118 53-226 7-124 (127)
77 2pl2_A Hypothetical conserved 98.5 1.2E-05 4.2E-10 68.5 18.2 180 55-274 6-196 (217)
78 3n71_A Histone lysine methyltr 98.5 1.8E-06 6.2E-11 84.4 14.3 141 28-212 321-465 (490)
79 3qky_A Outer membrane assembly 98.5 1.2E-05 4.3E-10 69.5 18.2 147 54-254 15-180 (261)
80 4gcn_A Protein STI-1; structur 98.5 2.1E-06 7E-11 67.6 11.8 111 138-263 10-121 (127)
81 4abn_A Tetratricopeptide repea 98.4 9.5E-06 3.2E-10 77.9 18.5 187 32-252 84-288 (474)
82 4g1t_A Interferon-induced prot 98.4 4.6E-06 1.6E-10 77.8 15.8 209 29-252 226-460 (472)
83 4abn_A Tetratricopeptide repea 98.4 1.3E-05 4.5E-10 76.9 19.1 190 28-243 114-313 (474)
84 2q7f_A YRRB protein; TPR, prot 98.4 4.7E-06 1.6E-10 70.0 13.9 172 49-252 18-189 (243)
85 4g1t_A Interferon-induced prot 98.4 8.9E-06 3.1E-10 75.8 17.1 208 29-253 151-403 (472)
86 3t5v_B Nuclear mRNA export pro 98.4 6.6E-06 2.3E-10 79.8 15.9 213 55-277 43-281 (455)
87 4gyw_A UDP-N-acetylglucosamine 98.4 7E-06 2.4E-10 83.8 16.2 99 137-253 78-176 (723)
88 3t5x_A PCI domain-containing p 98.4 1.3E-07 4.6E-12 82.3 2.9 62 221-283 13-74 (203)
89 1xnf_A Lipoprotein NLPI; TPR, 98.4 8.9E-06 3.1E-10 69.6 14.3 189 28-245 55-269 (275)
90 1hh8_A P67PHOX, NCF-2, neutrop 98.3 1.2E-05 4E-10 66.9 14.4 103 140-254 41-153 (213)
91 2vsy_A XCC0866; transferase, g 98.3 1.1E-05 3.6E-10 78.6 15.7 155 29-253 2-159 (568)
92 4gyw_A UDP-N-acetylglucosamine 98.3 7.1E-06 2.4E-10 83.8 14.5 156 28-213 21-176 (723)
93 3urz_A Uncharacterized protein 98.3 2.5E-05 8.7E-10 66.0 15.8 171 55-253 5-188 (208)
94 3rjv_A Putative SEL1 repeat pr 98.3 5E-05 1.7E-09 64.6 17.2 189 33-265 3-207 (212)
95 1hh8_A P67PHOX, NCF-2, neutrop 98.3 4E-05 1.4E-09 63.6 16.2 141 20-215 9-154 (213)
96 3mkr_A Coatomer subunit epsilo 98.3 0.00033 1.1E-08 62.7 23.3 196 27-252 10-230 (291)
97 2fo7_A Synthetic consensus TPR 98.3 7.3E-05 2.5E-09 55.8 16.2 131 55-251 2-132 (136)
98 4ga2_A E3 SUMO-protein ligase 98.3 8.8E-06 3E-10 65.6 11.2 121 29-213 10-131 (150)
99 2xm6_A Protein corresponding t 98.2 0.00069 2.3E-08 64.3 24.2 179 28-250 55-251 (490)
100 2pzi_A Probable serine/threoni 98.2 6.3E-05 2.1E-09 75.7 17.7 207 27-271 402-619 (681)
101 2xev_A YBGF; tetratricopeptide 98.1 8.8E-05 3E-09 56.4 13.8 114 139-266 5-118 (129)
102 3n71_A Histone lysine methyltr 98.1 6.9E-05 2.4E-09 73.2 16.0 150 58-252 313-465 (490)
103 2e2e_A Formate-dependent nitri 98.1 8.1E-05 2.8E-09 60.3 14.0 133 28-224 22-158 (177)
104 3mkr_A Coatomer subunit epsilo 98.1 0.00054 1.8E-08 61.3 20.1 183 29-250 78-263 (291)
105 3as5_A MAMA; tetratricopeptide 98.1 0.00016 5.5E-09 57.2 15.0 134 53-252 7-140 (186)
106 1elr_A TPR2A-domain of HOP; HO 98.1 7.9E-05 2.7E-09 55.8 12.4 104 137-252 5-109 (131)
107 2fo7_A Synthetic consensus TPR 98.1 0.00023 8E-09 52.9 15.0 120 29-212 14-133 (136)
108 1a17_A Serine/threonine protei 98.1 6.8E-05 2.3E-09 59.1 12.4 140 53-256 12-151 (166)
109 1p5q_A FKBP52, FK506-binding p 98.1 0.00017 5.8E-09 66.0 16.8 151 53-254 146-297 (336)
110 2r5s_A Uncharacterized protein 98.0 0.00014 4.7E-09 59.4 13.6 155 28-210 18-172 (176)
111 4gco_A Protein STI-1; structur 98.0 0.00014 4.7E-09 57.0 12.9 108 138-265 15-122 (126)
112 2xm6_A Protein corresponding t 98.0 0.0014 4.6E-08 62.3 22.2 92 137-250 256-359 (490)
113 3urz_A Uncharacterized protein 98.0 0.00012 4.2E-09 61.7 13.4 170 28-224 16-199 (208)
114 3rkv_A Putative peptidylprolyl 98.0 0.00048 1.6E-08 55.2 16.2 119 53-213 10-128 (162)
115 2xev_A YBGF; tetratricopeptide 97.9 0.00026 8.9E-09 53.7 13.6 122 56-231 4-126 (129)
116 4gco_A Protein STI-1; structur 97.9 0.00023 7.7E-09 55.7 13.3 100 53-212 12-111 (126)
117 4ga2_A E3 SUMO-protein ligase 97.9 0.00031 1.1E-08 56.4 14.1 118 137-279 32-150 (150)
118 3upv_A Heat shock protein STI1 97.9 0.00058 2E-08 52.0 14.6 116 138-271 6-122 (126)
119 3qou_A Protein YBBN; thioredox 97.9 0.00031 1.1E-08 62.5 14.7 156 28-211 129-284 (287)
120 1elr_A TPR2A-domain of HOP; HO 97.9 0.00029 1E-08 52.6 12.5 107 54-213 4-110 (131)
121 2vgx_A Chaperone SYCD; alterna 97.9 0.00076 2.6E-08 54.1 15.6 113 38-214 9-121 (148)
122 3upv_A Heat shock protein STI1 97.8 0.0009 3.1E-08 50.9 14.9 100 54-213 4-103 (126)
123 2lni_A Stress-induced-phosphop 97.8 0.00045 1.5E-08 52.0 13.0 100 135-252 15-114 (133)
124 3sz7_A HSC70 cochaperone (SGT) 97.8 0.00045 1.5E-08 55.4 13.4 106 134-257 9-114 (164)
125 3gyz_A Chaperone protein IPGC; 97.8 0.00035 1.2E-08 57.1 12.5 99 54-212 36-134 (151)
126 2vyi_A SGTA protein; chaperone 97.8 0.00096 3.3E-08 49.5 14.1 100 135-252 11-110 (131)
127 3q49_B STIP1 homology and U bo 97.8 0.00048 1.6E-08 52.7 12.6 100 137-254 10-109 (137)
128 2h6f_A Protein farnesyltransfe 97.8 0.0023 7.8E-08 60.1 19.5 184 29-248 110-302 (382)
129 2fbn_A 70 kDa peptidylprolyl i 97.8 0.00069 2.4E-08 56.0 14.2 140 53-242 37-176 (198)
130 1kt0_A FKBP51, 51 kDa FK506-bi 97.7 0.00064 2.2E-08 64.9 15.6 144 53-247 267-410 (457)
131 3qww_A SET and MYND domain-con 97.7 0.00016 5.6E-09 69.5 11.4 106 28-174 310-420 (433)
132 2vsy_A XCC0866; transferase, g 97.7 0.00092 3.1E-08 64.8 16.6 126 29-218 36-164 (568)
133 2ond_A Cleavage stimulation fa 97.7 0.0025 8.6E-08 56.7 18.3 192 32-254 80-273 (308)
134 3gyz_A Chaperone protein IPGC; 97.7 0.00046 1.6E-08 56.3 12.4 99 137-253 37-135 (151)
135 1p5q_A FKBP52, FK506-binding p 97.7 0.00067 2.3E-08 62.0 14.6 123 28-210 159-293 (336)
136 2xcb_A PCRH, regulatory protei 97.7 0.0014 4.8E-08 51.4 14.6 123 38-224 6-129 (142)
137 3sz7_A HSC70 cochaperone (SGT) 97.7 0.0018 6E-08 51.9 15.4 105 53-217 10-114 (164)
138 2dba_A Smooth muscle cell asso 97.7 0.00078 2.7E-08 51.7 12.7 104 53-213 27-130 (148)
139 3qwp_A SET and MYND domain-con 97.7 0.00049 1.7E-08 65.9 13.5 106 29-174 300-409 (429)
140 1a17_A Serine/threonine protei 97.7 0.0014 4.7E-08 51.3 14.1 100 136-253 13-112 (166)
141 2dba_A Smooth muscle cell asso 97.7 0.00043 1.5E-08 53.2 10.9 102 136-252 28-129 (148)
142 4b4t_S RPN3, 26S proteasome re 97.7 9.9E-05 3.4E-09 72.5 8.6 138 131-276 180-326 (523)
143 2lni_A Stress-induced-phosphop 97.7 0.00099 3.4E-08 50.0 12.6 104 50-213 12-115 (133)
144 1ihg_A Cyclophilin 40; ppiase 97.6 0.00067 2.3E-08 63.3 13.7 142 53-244 222-363 (370)
145 2kck_A TPR repeat; tetratricop 97.6 0.0005 1.7E-08 49.9 9.9 100 137-252 7-107 (112)
146 3q49_B STIP1 homology and U bo 97.6 0.0028 9.6E-08 48.3 14.6 115 54-228 9-126 (137)
147 2xcb_A PCRH, regulatory protei 97.6 0.0014 4.8E-08 51.4 13.1 99 137-253 19-117 (142)
148 3e4b_A ALGK; tetratricopeptide 97.6 0.0052 1.8E-07 58.3 19.4 181 30-260 159-356 (452)
149 2fbn_A 70 kDa peptidylprolyl i 97.6 0.0014 4.8E-08 54.1 13.2 110 137-252 39-152 (198)
150 1elw_A TPR1-domain of HOP; HOP 97.6 0.001 3.6E-08 48.5 11.1 98 137-252 5-102 (118)
151 2ond_A Cleavage stimulation fa 97.5 0.0092 3.1E-07 52.9 19.1 164 29-216 112-275 (308)
152 2vgx_A Chaperone SYCD; alterna 97.5 0.0015 5E-08 52.3 12.5 100 136-253 21-120 (148)
153 2vyi_A SGTA protein; chaperone 97.5 0.0035 1.2E-07 46.4 13.7 101 53-213 11-111 (131)
154 1na0_A Designed protein CTPR3; 97.5 0.0035 1.2E-07 46.0 13.5 99 54-212 9-107 (125)
155 1elw_A TPR1-domain of HOP; HOP 97.5 0.0036 1.2E-07 45.5 13.3 99 54-212 4-102 (118)
156 1na0_A Designed protein CTPR3; 97.5 0.0046 1.6E-07 45.3 13.6 98 137-252 10-107 (125)
157 1wao_1 Serine/threonine protei 97.4 0.00024 8.3E-09 68.5 7.8 117 28-206 18-134 (477)
158 3rkv_A Putative peptidylprolyl 97.4 0.0016 5.5E-08 52.0 11.6 110 137-252 12-127 (162)
159 2l6j_A TPR repeat-containing p 97.4 0.00022 7.5E-09 52.5 5.4 95 137-243 5-99 (111)
160 3k9i_A BH0479 protein; putativ 97.4 0.002 6.8E-08 48.8 10.8 89 29-166 3-91 (117)
161 2ooe_A Cleavage stimulation fa 97.3 0.031 1.1E-06 53.4 21.1 190 33-254 303-495 (530)
162 1hxi_A PEX5, peroxisome target 97.3 0.0018 6.1E-08 50.0 10.2 96 138-251 19-114 (121)
163 3qww_A SET and MYND domain-con 97.3 0.0035 1.2E-07 60.1 14.3 105 148-257 310-418 (433)
164 1xi4_A Clathrin heavy chain; a 97.3 0.018 6.1E-07 62.8 20.2 176 28-248 997-1221(1630)
165 3qwp_A SET and MYND domain-con 97.2 0.0062 2.1E-07 58.1 15.0 129 139-272 290-424 (429)
166 2h6f_A Protein farnesyltransfe 97.2 0.0089 3E-07 56.0 15.7 137 53-214 96-232 (382)
167 2hr2_A Hypothetical protein; a 97.2 0.0036 1.2E-07 52.2 11.6 102 28-167 23-133 (159)
168 2kck_A TPR repeat; tetratricop 97.2 0.0023 7.9E-08 46.3 9.2 99 56-212 8-107 (112)
169 2if4_A ATFKBP42; FKBP-like, al 97.2 0.0018 6.2E-08 59.2 10.3 151 53-252 178-329 (338)
170 3mv2_B Coatomer subunit epsilo 97.2 0.018 6.1E-07 53.0 16.9 161 55-276 101-270 (310)
171 4f3v_A ESX-1 secretion system 97.2 0.0042 1.4E-07 56.5 12.1 207 17-252 7-238 (282)
172 2e2e_A Formate-dependent nitri 97.1 0.0067 2.3E-07 48.7 12.2 111 137-267 45-158 (177)
173 3ma5_A Tetratricopeptide repea 97.1 0.0028 9.4E-08 47.0 8.9 73 28-105 19-91 (100)
174 3e4b_A ALGK; tetratricopeptide 97.0 0.017 5.8E-07 54.7 15.9 99 138-261 178-286 (452)
175 1ihg_A Cyclophilin 40; ppiase 97.0 0.0063 2.2E-07 56.5 12.2 110 137-252 224-337 (370)
176 3rjv_A Putative SEL1 repeat pr 97.0 0.045 1.5E-06 46.0 16.5 150 29-213 31-199 (212)
177 1kt0_A FKBP51, 51 kDa FK506-bi 97.0 0.0056 1.9E-07 58.3 12.0 110 137-252 269-381 (457)
178 2c2l_A CHIP, carboxy terminus 96.9 0.01 3.5E-07 52.4 12.1 99 138-254 6-104 (281)
179 1hxi_A PEX5, peroxisome target 96.9 0.016 5.5E-07 44.4 11.6 96 57-212 20-115 (121)
180 2r5s_A Uncharacterized protein 96.8 0.033 1.1E-06 44.9 13.7 164 56-250 8-172 (176)
181 3ma5_A Tetratricopeptide repea 96.8 0.0099 3.4E-07 43.9 9.6 71 137-219 8-78 (100)
182 2pzi_A Probable serine/threoni 96.8 0.0066 2.3E-07 60.8 11.0 153 65-250 402-562 (681)
183 3mv2_B Coatomer subunit epsilo 96.8 0.032 1.1E-06 51.2 14.7 160 28-212 112-283 (310)
184 2hr2_A Hypothetical protein; a 96.8 0.015 5.1E-07 48.4 11.3 116 138-254 13-134 (159)
185 2c2l_A CHIP, carboxy terminus 96.8 0.0084 2.9E-07 53.0 10.4 88 28-167 16-103 (281)
186 3k9i_A BH0479 protein; putativ 96.7 0.009 3.1E-07 45.0 9.0 68 134-213 25-92 (117)
187 1klx_A Cysteine rich protein B 96.7 0.055 1.9E-06 42.6 13.7 98 142-265 31-136 (138)
188 2kat_A Uncharacterized protein 96.7 0.011 3.6E-07 44.2 8.9 73 28-105 31-103 (115)
189 2kc7_A BFR218_protein; tetratr 96.6 0.012 4E-07 42.5 8.8 74 29-106 13-86 (99)
190 4g26_A Pentatricopeptide repea 96.5 0.091 3.1E-06 51.0 16.8 171 55-247 27-200 (501)
191 2if4_A ATFKBP42; FKBP-like, al 96.5 0.011 3.7E-07 53.9 9.4 110 137-252 180-294 (338)
192 2kat_A Uncharacterized protein 96.5 0.044 1.5E-06 40.7 11.3 77 183-265 20-96 (115)
193 1wao_1 Serine/threonine protei 96.4 0.0094 3.2E-07 57.2 8.6 97 138-252 8-104 (477)
194 3qou_A Protein YBBN; thioredox 96.4 0.11 3.8E-06 45.7 15.1 166 54-250 117-283 (287)
195 1na3_A Designed protein CTPR2; 96.3 0.032 1.1E-06 38.9 9.3 65 136-212 9-73 (91)
196 2kc7_A BFR218_protein; tetratr 96.3 0.034 1.2E-06 40.0 9.5 63 139-213 3-66 (99)
197 2ooe_A Cleavage stimulation fa 96.2 0.15 5.2E-06 48.5 16.4 161 29-213 334-494 (530)
198 2l6j_A TPR repeat-containing p 95.9 0.14 4.7E-06 36.9 11.1 71 182-258 4-74 (111)
199 3txn_A 26S proteasome regulato 95.8 0.37 1.3E-05 45.6 16.7 142 29-218 72-217 (394)
200 2v5f_A Prolyl 4-hydroxylase su 95.8 0.082 2.8E-06 39.6 9.7 81 137-224 6-86 (104)
201 4f3v_A ESX-1 secretion system 95.7 0.058 2E-06 48.9 10.0 96 138-250 104-199 (282)
202 1na3_A Designed protein CTPR2; 95.5 0.16 5.4E-06 35.2 9.9 68 179-252 6-73 (91)
203 1klx_A Cysteine rich protein B 95.5 0.17 5.9E-06 39.6 11.1 110 30-211 9-126 (138)
204 1xi4_A Clathrin heavy chain; a 95.2 0.73 2.5E-05 50.5 18.0 51 141-211 1200-1250(1630)
205 4b4t_R RPN7, 26S proteasome re 95.2 0.14 5E-06 48.5 11.6 107 54-165 131-237 (429)
206 3ffl_A Anaphase-promoting comp 95.2 0.15 5.1E-06 42.7 10.0 102 140-244 24-144 (167)
207 4g26_A Pentatricopeptide repea 94.6 1.7 6E-05 41.8 17.5 157 28-212 38-205 (501)
208 2v5f_A Prolyl 4-hydroxylase su 94.5 0.33 1.1E-05 36.1 9.6 79 185-265 8-87 (104)
209 4b4t_P 26S proteasome regulato 94.4 0.46 1.6E-05 45.3 12.8 118 53-218 136-254 (445)
210 3bee_A Putative YFRE protein; 93.5 0.17 5.8E-06 37.5 6.2 50 31-84 24-73 (93)
211 1b89_A Protein (clathrin heavy 93.2 0.13 4.3E-06 49.7 6.3 20 230-249 215-234 (449)
212 3ffl_A Anaphase-promoting comp 92.5 0.67 2.3E-05 38.7 9.0 115 29-147 33-166 (167)
213 2br9_A 14-3-3E, 14-3-3 protein 92.4 5.3 0.00018 35.0 16.1 54 198-251 146-202 (234)
214 1nzn_A CGI-135 protein, fissio 92.2 0.73 2.5E-05 36.7 8.5 80 17-102 35-118 (126)
215 1pc2_A Mitochondria fission pr 91.9 0.27 9.2E-06 40.5 5.8 53 31-87 50-103 (152)
216 1zu2_A Mitochondrial import re 91.4 0.18 6.2E-06 41.7 4.3 51 32-87 62-123 (158)
217 2o8p_A 14-3-3 domain containin 90.7 7.9 0.00027 33.7 16.0 173 58-252 10-198 (227)
218 3bee_A Putative YFRE protein; 89.7 1.6 5.3E-05 32.1 7.9 66 183-254 7-75 (93)
219 1o9d_A 14-3-3-like protein C; 89.5 11 0.00037 33.5 15.6 55 198-252 151-208 (260)
220 2npm_A 14-3-3 domain containin 89.3 11 0.00038 33.4 15.7 55 198-252 172-228 (260)
221 1zu2_A Mitochondrial import re 89.3 2.1 7.2E-05 35.2 9.0 86 116-213 15-122 (158)
222 4e6h_A MRNA 3'-END-processing 89.2 16 0.00054 36.7 17.2 158 31-213 358-535 (679)
223 3o48_A Mitochondria fission 1 87.7 0.91 3.1E-05 36.6 5.6 80 16-102 39-122 (134)
224 1b89_A Protein (clathrin heavy 87.0 1.8 6.3E-05 41.5 8.3 93 141-249 212-309 (449)
225 2wpv_A GET4, UPF0363 protein Y 86.2 19 0.00066 32.6 14.8 172 27-208 24-214 (312)
226 1y8m_A FIS1; mitochondria, unk 86.1 1.1 3.9E-05 36.4 5.4 81 15-102 37-121 (144)
227 4b4t_O 26S proteasome regulato 85.3 4.5 0.00015 37.8 9.9 141 60-209 45-196 (393)
228 3ubw_A 14-3-3E, 14-3-3 protein 85.2 20 0.00068 31.9 15.4 55 198-252 172-229 (261)
229 1pc2_A Mitochondria fission pr 84.9 6.4 0.00022 32.1 9.5 70 134-213 30-102 (152)
230 2ff4_A Probable regulatory pro 82.8 12 0.0004 34.6 11.6 137 52-226 113-253 (388)
231 2ra1_A Surface layer protein; 77.9 46 0.0016 31.2 14.3 126 53-210 102-230 (412)
232 3uzd_A 14-3-3 protein gamma; s 77.7 36 0.0012 29.9 14.1 55 198-252 147-204 (248)
233 4h7y_A Dual specificity protei 76.2 15 0.00051 30.3 8.7 88 132-233 57-145 (161)
234 3iqu_A 14-3-3 protein sigma; s 70.7 53 0.0018 28.6 15.5 54 198-251 149-205 (236)
235 3axj_A GM27569P, translin; tra 70.5 42 0.0014 29.4 11.0 54 215-268 150-217 (249)
236 3ly7_A Transcriptional activat 67.3 80 0.0027 29.3 13.4 61 184-251 279-339 (372)
237 3mkq_A Coatomer beta'-subunit; 66.2 36 0.0012 33.1 10.7 26 140-165 685-710 (814)
238 3mkq_A Coatomer beta'-subunit; 66.0 9.6 0.00033 37.3 6.5 98 144-262 660-770 (814)
239 1wy6_A Hypothetical protein ST 63.3 60 0.0021 26.5 9.9 54 145-210 100-153 (172)
240 3ly7_A Transcriptional activat 60.1 1.1E+02 0.0037 28.4 16.3 129 69-214 214-342 (372)
241 3lpz_A GET4 (YOR164C homolog); 59.7 1.1E+02 0.0036 28.1 17.6 167 28-207 24-212 (336)
242 3dss_A Geranylgeranyl transfer 58.9 1E+02 0.0035 27.8 13.5 124 32-165 161-304 (331)
243 4e6h_A MRNA 3'-END-processing 57.5 1.6E+02 0.0053 29.4 18.4 168 58-252 347-534 (679)
244 1nzn_A CGI-135 protein, fissio 57.0 68 0.0023 25.1 10.2 69 134-212 33-104 (126)
245 4b0z_A RPN12, 26S proteasome r 52.0 91 0.0031 26.5 9.6 26 140-165 11-36 (229)
246 2qx5_A Nucleoporin NIC96; mRNA 49.4 60 0.0021 32.5 9.0 104 56-167 445-568 (661)
247 3u64_A Protein TP_0956; tetrat 49.4 47 0.0016 30.0 7.5 66 16-84 204-270 (301)
248 3mkq_B Coatomer subunit alpha; 49.3 70 0.0024 26.5 8.0 19 144-162 13-31 (177)
249 2wpv_A GET4, UPF0363 protein Y 49.0 1.5E+02 0.0051 26.6 11.0 192 30-252 11-218 (312)
250 3mkq_B Coatomer subunit alpha; 48.2 70 0.0024 26.5 7.9 49 27-84 16-64 (177)
251 2ff4_A Probable regulatory pro 48.2 26 0.00089 32.2 5.8 70 28-101 183-255 (388)
252 3u64_A Protein TP_0956; tetrat 47.7 94 0.0032 28.0 9.2 86 153-254 180-272 (301)
253 4h7y_A Dual specificity protei 45.8 1.2E+02 0.0042 24.8 9.5 100 61-169 20-127 (161)
254 3ax2_A Mitochondrial import re 44.1 75 0.0026 22.5 6.4 38 132-169 13-50 (73)
255 2ijq_A Hypothetical protein; s 43.3 72 0.0025 26.0 7.1 74 137-254 33-107 (161)
256 3kae_A CDC27, possible protein 41.7 1.3E+02 0.0045 25.4 8.5 93 142-252 39-144 (242)
257 4gns_B Protein CSD3, chitin bi 39.9 30 0.001 35.2 5.2 48 28-80 349-397 (754)
258 3kae_A CDC27, possible protein 39.4 99 0.0034 26.2 7.3 57 28-84 74-144 (242)
259 1y8m_A FIS1; mitochondria, unk 36.9 1.6E+02 0.0055 23.5 8.5 69 133-212 36-107 (144)
260 3lpz_A GET4 (YOR164C homolog); 34.9 2.6E+02 0.009 25.4 12.0 144 33-206 13-160 (336)
261 1dce_A Protein (RAB geranylger 34.8 3.1E+02 0.011 26.2 15.4 51 29-84 42-103 (567)
262 3spa_A Mtrpol, DNA-directed RN 34.1 2.1E+02 0.007 30.6 10.3 51 54-106 127-177 (1134)
263 4a1g_A Mitotic checkpoint seri 33.5 1.4E+02 0.0047 24.1 7.2 58 112-169 64-134 (152)
264 4a5x_A MITD1, MIT domain-conta 32.8 1.1E+02 0.0038 22.0 6.0 22 63-84 25-46 (86)
265 4ady_A RPN2, 26S proteasome re 32.4 4.6E+02 0.016 27.4 16.7 124 28-165 25-174 (963)
266 3dss_A Geranylgeranyl transfer 32.2 67 0.0023 29.1 5.7 51 32-83 254-304 (331)
267 3o48_A Mitochondria fission 1 31.1 2E+02 0.0067 22.8 11.2 70 132-212 36-108 (134)
268 1zbp_A Hypothetical protein VP 31.0 2.3E+02 0.0079 25.1 8.8 55 27-88 8-64 (273)
269 4a1g_A Mitotic checkpoint seri 30.8 2E+02 0.0067 23.1 7.8 91 115-222 47-140 (152)
270 2crb_A Nuclear receptor bindin 30.6 82 0.0028 23.6 4.9 40 58-97 19-58 (97)
271 1wfd_A Hypothetical protein 15 27.5 1.6E+02 0.0055 21.4 6.2 27 58-84 19-45 (93)
272 3spa_A Mtrpol, DNA-directed RN 27.4 1.1E+02 0.0037 32.7 6.9 55 28-82 139-193 (1134)
273 4b4t_S RPN3, 26S proteasome re 26.9 1.1E+02 0.0037 29.8 6.5 70 136-212 231-300 (523)
274 1om2_A Protein (mitochondrial 26.8 90 0.0031 23.3 4.6 37 133-169 17-53 (95)
275 1om2_A Protein (mitochondrial 26.7 65 0.0022 24.1 3.8 52 30-82 11-65 (95)
276 3qb5_K Translin-associated pro 26.4 3.4E+02 0.012 24.0 10.8 54 215-268 182-250 (290)
277 2npu_A FKBP12-rapamycin comple 24.9 2.5E+02 0.0084 21.9 8.9 34 50-84 37-70 (126)
278 3efz_A 14-3-3 protein; 14-3-3, 24.7 3.6E+02 0.012 23.8 15.3 54 198-251 168-226 (268)
279 3esl_A Checkpoint serine/threo 24.2 3.2E+02 0.011 23.0 10.1 82 130-223 74-155 (202)
280 2wvi_A Mitotic checkpoint seri 24.0 2.9E+02 0.0099 22.4 8.8 93 115-224 42-137 (164)
281 3txs_A Terminase DNA packaging 23.6 72 0.0024 23.7 3.4 29 235-263 23-62 (94)
282 2v6x_A Vacuolar protein sortin 23.5 2E+02 0.0067 20.3 6.3 22 63-84 22-43 (85)
283 1j1j_A Translin; testis/brain 23.3 3.5E+02 0.012 23.1 10.5 54 215-268 147-214 (240)
284 2rpa_A Katanin P60 ATPase-cont 22.7 1E+02 0.0035 22.1 4.1 26 59-84 17-42 (78)
285 2wvi_A Mitotic checkpoint seri 22.1 3.2E+02 0.011 22.1 7.9 58 112-169 59-129 (164)
286 1v9v_A KIAA0561 protein; helix 21.7 1.8E+02 0.0061 22.3 5.4 54 116-169 43-106 (114)
287 2bf9_A Pancreatic hormone; tur 20.8 89 0.003 19.1 2.8 22 69-91 13-34 (36)
No 1
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=100.00 E-value=1.3e-52 Score=401.90 Aligned_cols=227 Identities=23% Similarity=0.372 Sum_probs=214.6
Q ss_pred cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHH
Q 023037 48 EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALE 127 (288)
Q Consensus 48 e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~ 127 (288)
+..+++|.|+.+||++|+++|+++++.++++.+++|+ +.++||+++|+||+|+|.++.+|+ ..+.++++|+++|+
T Consensus 13 ~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~kak~~k~v~~l~~~~~~~~~----~~~~~~~~~~~~~~ 87 (394)
T 3txn_A 13 ERIRIKEQGILQQGELYKQEGKAKELADLIKVTRPFL-SSISKAKAAKLVRSLVDMFLDMDA----GTGIEVQLCKDCIE 87 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGG-GGSCHHHHHHHHHHHHHHHTTSCC----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHhchHHHHHHHHHHHHHHhcCCC----cHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999 999999999999999999999988 77999999999999
Q ss_pred HhhhhhhhH-H--hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHH
Q 023037 128 EAKNERLWF-K--TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQL 204 (288)
Q Consensus 128 ~a~ner~~f-~--~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~ 204 (288)
||+++|||| | +++|||.+|++.|+|++|.++++++++.|... ||+ .+++|||++|+++|+.++|++|+|++
T Consensus 88 ~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~---dd~---~~llev~lle~~~~~~~~n~~k~k~~ 161 (394)
T 3txn_A 88 WAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKL---DDK---NLLVEVQLLESKTYHALSNLPKARAA 161 (394)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS---SCT---HHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcc---ccc---hhHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999998888 5 77799999999999999999999999999987 777 99999999999999999999999999
Q ss_pred HHHHHhhhccCCC-hhHHHHHHhhcchhhh-hhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhcCC--CCCC
Q 023037 205 YQKALAIKSAIPH-PRIMGIIRECGGKMHM-AERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMES--EVNP 280 (288)
Q Consensus 205 y~~A~~~a~~I~~-p~i~a~I~~~~G~l~~-~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~~~--~~dp 280 (288)
|++|++++++|+| |++||.|++|||++|+ .+|||++|+++|+|||++|+++|+|++.++||||+||+||+++ +++|
T Consensus 162 l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl~~~r~el~~ 241 (394)
T 3txn_A 162 LTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQSDDVNQ 241 (394)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCGGGHHH
T ss_pred HHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999965 9999999999999999 9999999999999999999999999999999999999999998 4555
Q ss_pred CCCCC
Q 023037 281 FDGQE 285 (288)
Q Consensus 281 F~s~E 285 (288)
|.+++
T Consensus 242 ~l~~~ 246 (394)
T 3txn_A 242 LVSGK 246 (394)
T ss_dssp HHHSH
T ss_pred Hhccc
Confidence 55443
No 2
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=250.89 Aligned_cols=254 Identities=17% Similarity=0.274 Sum_probs=224.0
Q ss_pred Hhhcc-cCCCCHHHHHHHHHHhhcCCcc-------------chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh
Q 023037 22 ILEKG-LVETDPEGALAGFAEVVAMEPE-------------KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSA 87 (288)
Q Consensus 22 ~~ak~-~~~~d~~~Al~~f~~ii~~~~e-------------~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~ 87 (288)
.+|+. ...+++++|++.|+++++..+. ..++.++|+.+||.+|.++|+++++.++|++++++. +.
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~-~~ 87 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM-MQ 87 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH-HT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HH
Confidence 34554 3578999999999999986541 246899999999999999999999999999999999 89
Q ss_pred hhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhh---hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHH
Q 023037 88 VTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAK---NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHK 164 (288)
Q Consensus 88 v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~---ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk 164 (288)
++++++++.++++++.+...++ ..+..++.+.++++|+. ++..+.++..+||.+|.+.|+|.+|..+++++..
T Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~----~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~ 163 (434)
T 4b4t_Q 88 FAKSKTVKVLKTLIEKFEQVPD----SLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR 163 (434)
T ss_dssp SCHHHHHHHHHHHHHHHCSCCS----CHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhCCC----CHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHH
Confidence 9999999999999999998876 55556666666666655 5567779999999999999999999999999999
Q ss_pred hccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-hhHHHHHHhhcchhhhhhccHHHHHH
Q 023037 165 SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGIIRECGGKMHMAERQWADAAT 243 (288)
Q Consensus 165 ~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p~i~a~I~~~~G~l~~~ekdy~~A~s 243 (288)
.+... +|+ ...+|++..++++|..++|+.+|+.+|++|+++.++++| |.++|.++.++|.+|+.+++|++|+.
T Consensus 164 ~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 164 EFKKL---DDK---PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp HHTTS---SCS---THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred HHHhc---ccc---hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 98877 677 889999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred HHHHHHhhhhhhCC----hhHHHHhHHHHHHHHhcCCCC---CCCCCCCC
Q 023037 244 DFFEAFKNYDEAGN----QRRIQCLKYLVLANMLMESEV---NPFDGQEA 286 (288)
Q Consensus 244 yF~EaF~~y~e~g~----~~a~~~LKY~~L~~il~~~~~---dpF~s~E~ 286 (288)
+|+++|+.|+..++ +.+..+++|+++|.++.+... ++++++++
T Consensus 238 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 287 (434)
T 4b4t_Q 238 YFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYT 287 (434)
T ss_dssp HHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCSSS
T ss_pred HHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhccchhHHHhHHHHHHH
Confidence 99999999998876 588999999999999987653 45555554
No 3
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-28 Score=237.19 Aligned_cols=245 Identities=13% Similarity=0.122 Sum_probs=198.8
Q ss_pred HHHHhhcccCCCCHHHHHHHHHHhhcCC--ccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 023037 19 LCSILEKGLVETDPEGALAGFAEVVAME--PEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKC 96 (288)
Q Consensus 19 ~~y~~ak~~~~~d~~~Al~~f~~ii~~~--~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~ 96 (288)
..++.|+++..+||++|++.+..+-+.. .+...|.++++.++++++++.|+++.+.+++..+ ... ....|+.++++
T Consensus 19 ~~~~~~~~l~~~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~L-skk-r~qlk~ai~~~ 96 (445)
T 4b4t_P 19 EEFPKIDSLAQNDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLL-SKK-HGQLKLSIQYM 96 (445)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH-HTT-TTTSHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHH-HHH-hhhhHHHHHHH
Confidence 4688899999999999999987766532 2468899999999999999999999999988644 444 45678999999
Q ss_pred HHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhH-----HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCC
Q 023037 97 INNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWF-----KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG 171 (288)
Q Consensus 97 i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f-----~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~ 171 (288)
|+.+++.+..+|+ ........+.+.+.+..+.|.|+ ++..+|+.+|.+.|+|.+|..+++++..-+...
T Consensus 97 V~~~~~~l~~~~~----~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~-- 170 (445)
T 4b4t_P 97 IQKVMEYLKSSKS----LDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGS-- 170 (445)
T ss_dssp HHHHHHHHHHHCT----THHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--
T ss_pred HHHHHHHHhcCCc----hhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--
Confidence 9999999987765 22223333444444444444443 788999999999999999999999999887654
Q ss_pred CccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHh
Q 023037 172 TDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (288)
Q Consensus 172 ~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~ 250 (288)
+|+ ..++|+++.|+++|...+|+.+|+.+++++++..+++++ |.+++.+++|+|++|++++||.+|+++|+|+|+
T Consensus 171 -~~~---~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 171 -MEM---SEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp -SCH---HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred -ccH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 777 899999999999999999999999999999998888777 999999999999999999999999999999999
Q ss_pred hhhhhCChh-HHHHhHHHHHHHHhcC
Q 023037 251 NYDEAGNQR-RIQCLKYLVLANMLME 275 (288)
Q Consensus 251 ~y~e~g~~~-a~~~LKY~~L~~il~~ 275 (288)
+|+..|++. +..+|+|+|+|.||..
T Consensus 247 ~~~~~~d~~~~~~~L~~~v~~~iLa~ 272 (445)
T 4b4t_P 247 TDAIKSDEAKWKPVLSHIVYFLVLSP 272 (445)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHSS
T ss_pred cccccCCHHHHHHHHHHHHHHHHhCC
Confidence 999999985 5678888888888753
No 4
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.4e-19 Score=172.97 Aligned_cols=255 Identities=11% Similarity=0.050 Sum_probs=169.3
Q ss_pred hHHHHHHhhcccCCCCHHHHHHHHHHhhcC-CccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----hhh
Q 023037 16 SRVLCSILEKGLVETDPEGALAGFAEVVAM-EPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKS-----AVT 89 (288)
Q Consensus 16 ~~~~~y~~ak~~~~~d~~~Al~~f~~ii~~-~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~-----~v~ 89 (288)
+.=+.|++.+..+..|++-|...|.-.... .++..+|..+.+..++ ...++ ..+|+.+..-+.. ..+
T Consensus 8 ~~e~~y~d~~~~k~P~~~la~~~f~l~~~~~~~~~~~~~~~~l~~~i---k~~~m----a~~y~~l~~~l~~~~~~~~~~ 80 (429)
T 4b4t_R 8 SQEVEYVDPTVNRVPNYEVSEKAFLLTQSKVSIEQRKEAAEFVLAKI---KEEEM----APYYKYLCEEYLVNNGQSDLE 80 (429)
T ss_dssp ----------------------------------CHHHHHHHHHHHH---HHTCC----HHHHHHHHHHSCCCCSCCSSC
T ss_pred hhhccccCcccccCCChHHHHHHHHhcCCCCChhhHHHHHHHHHHHH---HHhCC----HHHHHHHHHHHhhcccchhhh
Confidence 334678999888889999888888543222 2234555555555444 44443 4456655544311 112
Q ss_pred hhhHHHHHHHHHHHhc----cCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHh
Q 023037 90 RNYSEKCINNIMDFVS----GSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKS 165 (288)
Q Consensus 90 ka~~~k~i~~ild~~~----~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~ 165 (288)
+.......+..+.... .++..+...++.+.+....+-+....+..|.++..+||..|++.|++++|.+++.+++..
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~n~~~l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~ 160 (429)
T 4b4t_R 81 HDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSK 160 (429)
T ss_dssp SHHHHHHHHHTTTTCCSSCTTTTCCSSCCHHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHH
T ss_pred hhhhhhhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 2223333332211111 112234445566665555555555677889999999999999999999999999999999
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHH
Q 023037 166 CQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDF 245 (288)
Q Consensus 166 ~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF 245 (288)
|... ...+++++.+++++...+|+..++..+.+|.++....++|..++.++.|+|++|+.+++|.+|.++|
T Consensus 161 ~~~~---------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f 231 (429)
T 4b4t_R 161 AIST---------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLL 231 (429)
T ss_dssp HTCC---------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHH
T ss_pred cCCh---------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 8753 4568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhCChhHHHHhHHHHHHHHhcCCCCC----CCCCCCC
Q 023037 246 FEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVN----PFDGQEA 286 (288)
Q Consensus 246 ~EaF~~y~e~g~~~a~~~LKY~~L~~il~~~~~d----pF~s~E~ 286 (288)
+|+|.+|+..+.+.+.++++|++||.+++.+..| |+++++.
T Consensus 232 ~e~~~t~~~~e~~~~~~~~~y~~l~al~~~~r~~l~~~v~~~~~~ 276 (429)
T 4b4t_R 232 VDSLATFTSIELTSYESIATYASVTGLFTLERTDLKSKVIDSPEL 276 (429)
T ss_dssp HHHHHHSCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHSSSSSHHH
T ss_pred HHHhccCCccchhhHHHHHHHHHHHHHhcCCHHHHHHHHhcCHHH
Confidence 9999999999999999999999999999877655 8888764
No 5
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.60 E-value=8.7e-13 Score=120.00 Aligned_cols=239 Identities=12% Similarity=0.029 Sum_probs=190.9
Q ss_pred hhhhHHHHHHhhccc-CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh
Q 023037 13 FTVSRVLCSILEKGL-VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN 91 (288)
Q Consensus 13 ~~~~~~~~y~~ak~~-~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka 91 (288)
+..+.+.++..|... ..+++++|+..|++++...++.......++..+|.+|...|+++++++++++.+...+..-...
T Consensus 5 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 5 MEASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccH
Confidence 344445555555543 5789999999999999987765555678999999999999999999999999999874333333
Q ss_pred hHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcc--------------------
Q 023037 92 YSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGE-------------------- 151 (288)
Q Consensus 92 ~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~-------------------- 151 (288)
....+...+-..+... ++++.....++.+++.....++......+...+|.+|...|+
T Consensus 85 ~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~ 162 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVL--GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDA 162 (406)
T ss_dssp HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHH
Confidence 4444444443333322 345566777777777776666666677899999999999999
Q ss_pred hhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchh
Q 023037 152 YGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKM 231 (288)
Q Consensus 152 y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l 231 (288)
|++|...+++..+.+... .+. .....++..-+.+|..+|++.+|...+.+|+.+......|...+.+...-|.+
T Consensus 163 ~~~A~~~~~~al~~~~~~---~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 236 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTAL---GDR---AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNA 236 (406)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCH---HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---cCc---HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 999999999988886655 344 66788899999999999999999999999999999988888889999999999
Q ss_pred hhhhccHHHHHHHHHHHHhhhhhhCChh
Q 023037 232 HMAERQWADAATDFFEAFKNYDEAGNQR 259 (288)
Q Consensus 232 ~~~ekdy~~A~syF~EaF~~y~e~g~~~ 259 (288)
|...|+|+.|..+|-++.+.+...+++.
T Consensus 237 ~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 237 YIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 9999999999999999999888877653
No 6
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.59 E-value=1.2e-12 Score=114.84 Aligned_cols=232 Identities=12% Similarity=0.031 Sum_probs=185.5
Q ss_pred HHHhhccc-CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 023037 20 CSILEKGL-VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCIN 98 (288)
Q Consensus 20 ~y~~ak~~-~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~ 98 (288)
.+..|... ..+++++|+..|++.+...++...+...++..++.+|...|+++++++++++.+...+..-.......+..
T Consensus 8 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 87 (338)
T 3ro2_A 8 LALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASG 87 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 33344443 56899999999999999877666666789999999999999999999999999998743333334444554
Q ss_pred HHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcc--------------------hhHHHHH
Q 023037 99 NIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGE--------------------YGRMSKI 158 (288)
Q Consensus 99 ~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~--------------------y~~~~~l 158 (288)
.+-...... .+.+.....++.+++.....++......+...++.+|...|+ |+++...
T Consensus 88 ~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 165 (338)
T 3ro2_A 88 NLGNTLKVL--GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDL 165 (338)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--cCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 443333322 345566777777777777666666667899999999999999 9999999
Q ss_pred HHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccH
Q 023037 159 LKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQW 238 (288)
Q Consensus 159 l~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy 238 (288)
+++..+.+... .+. .....++...+.+|...+++.+|...+.+++.+......|...+.+...-|.++...|+|
T Consensus 166 ~~~a~~~~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 239 (338)
T 3ro2_A 166 YEENLSLVTAL---GDR---AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF 239 (338)
T ss_dssp HHHHHHHHHHH---TCH---HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHhc---CCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCH
Confidence 98887775544 333 666788889999999999999999999999999988888888899999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhCChh
Q 023037 239 ADAATDFFEAFKNYDEAGNQR 259 (288)
Q Consensus 239 ~~A~syF~EaF~~y~e~g~~~ 259 (288)
+.|..+|-++.+.+...+++.
T Consensus 240 ~~A~~~~~~al~~~~~~~~~~ 260 (338)
T 3ro2_A 240 ETASEYYKKTLLLARQLKDRA 260 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhhcchh
Confidence 999999999999888877653
No 7
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.56 E-value=1.4e-12 Score=118.64 Aligned_cols=239 Identities=16% Similarity=0.072 Sum_probs=175.3
Q ss_pred CCCHHHHHHHHHHhhcCCcc--chhhHHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHHHh
Q 023037 29 ETDPEGALAGFAEVVAMEPE--KAEWGFKALKQTVKLYYRLGK--------------------YKEMMDAYREMLTYIKS 86 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e--~~~~~~kal~~l~~l~~~~g~--------------------~~~~l~~~~~~l~~~~~ 86 (288)
.+++++|++.|+++++..+. .......++..++.+|...|+ ++++++++.+.+...+.
T Consensus 100 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~ 179 (406)
T 3sf4_A 100 LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTA 179 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 45667777777777665331 223345677777777777777 77777777777766633
Q ss_pred hhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhc
Q 023037 87 AVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSC 166 (288)
Q Consensus 87 ~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~ 166 (288)
.-.......+..++-...... .+.+.....++.+++.....++......+...+|.+|...|++++|...+++..+..
T Consensus 180 ~~~~~~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 180 LGDRAAQGRAFGNLGNTHYLL--GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH--TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHHc--cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 222333333333333222211 345566666777777666665566666889999999999999999999999999886
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHH
Q 023037 167 QREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFF 246 (288)
Q Consensus 167 ~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~ 246 (288)
+.. ++. .....++..-+.+|..+|++.+|...|.+|..+.....++...+.+...-|.+|...|+|+.|..+|-
T Consensus 258 ~~~---~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 331 (406)
T 3sf4_A 258 RQL---KDR---AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAE 331 (406)
T ss_dssp HHT---TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HhC---cCc---hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 554 333 66688999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHhhhhhhCCh-hHHHHhHHHHHHHHhcC
Q 023037 247 EAFKNYDEAGNQ-RRIQCLKYLVLANMLME 275 (288)
Q Consensus 247 EaF~~y~e~g~~-~a~~~LKY~~L~~il~~ 275 (288)
++.+.+.+.|++ ....++..+..+....+
T Consensus 332 ~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 361 (406)
T 3sf4_A 332 KHLEISREVGDKSGELTARLNLSDLQMVLG 361 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcchhHHHHHHHHHHHHhh
Confidence 999999999874 55556554444444444
No 8
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.55 E-value=7e-13 Score=116.27 Aligned_cols=140 Identities=16% Similarity=0.027 Sum_probs=93.6
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHH
Q 023037 112 FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191 (288)
Q Consensus 112 ~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~ 191 (288)
.+.....++.+++.....++......+...+|.+|...|+++++...+++.....+.. ++. ....+++..-+.+
T Consensus 199 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~---~~~~~~~~~la~~ 272 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL---KDR---AVEAQSCYSLGNT 272 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT---TCH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh---cch---hHHHHHHHHHHHH
Confidence 4445555555555555444445555677777777888888887777777777765443 233 4556777777777
Q ss_pred HHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCC
Q 023037 192 YTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGN 257 (288)
Q Consensus 192 y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~ 257 (288)
|..+|++.+|...|.+|+.+......|...+.+...-|.++...|+++.|..+|-++.+.+.+.||
T Consensus 273 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~d 338 (338)
T 3ro2_A 273 YTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGD 338 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC------
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhcC
Confidence 777788888888888877777777777777777777777777778888888888777777776654
No 9
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.55 E-value=3.5e-12 Score=117.39 Aligned_cols=230 Identities=16% Similarity=0.089 Sum_probs=183.0
Q ss_pred HHhhcc-cCCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 023037 21 SILEKG-LVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINN 99 (288)
Q Consensus 21 y~~ak~-~~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ 99 (288)
+..|.. ...+++++|++.|++++...++...+...++..+|.+|...|+++++.+++++.+...+..-.......+...
T Consensus 52 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 131 (411)
T 4a1s_A 52 ALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGN 131 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 333443 3578999999999999998776666667899999999999999999999999999987443334444455555
Q ss_pred HHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcc-----------------hhHHHHHHHHH
Q 023037 100 IMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGE-----------------YGRMSKILKEL 162 (288)
Q Consensus 100 ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~-----------------y~~~~~ll~el 162 (288)
+-..+... .+.+.....++.+++.....++......+...+|.+|...|+ |+++...+++.
T Consensus 132 l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~a 209 (411)
T 4a1s_A 132 LGNTLKVM--GRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQEN 209 (411)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC--CCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHH
Confidence 44433322 345567777777777777666667777899999999999999 99999999888
Q ss_pred HHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHH
Q 023037 163 HKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAA 242 (288)
Q Consensus 163 kk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~ 242 (288)
.+..... .+. .....++..-+.+|..++++.+|...|.+++.+......+...+.+...-|.++...++|+.|.
T Consensus 210 l~~~~~~---~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 283 (411)
T 4a1s_A 210 LKLMRDL---GDR---GAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAA 283 (411)
T ss_dssp HHHHHHH---TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHc---CCH---HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 8775443 233 5567788888999999999999999999999998888888888888888899999999999999
Q ss_pred HHHHHHHhhhhhhCCh
Q 023037 243 TDFFEAFKNYDEAGNQ 258 (288)
Q Consensus 243 syF~EaF~~y~e~g~~ 258 (288)
.+|-++.+.+...+++
T Consensus 284 ~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 284 EHYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHcCCH
Confidence 9999999988877764
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.54 E-value=2.5e-12 Score=118.74 Aligned_cols=201 Identities=11% Similarity=0.021 Sum_probs=158.9
Q ss_pred CCCCHHHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHh
Q 023037 28 VETDPEGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVT-RNYSEKCINNIMDFV 104 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~-ka~~~k~i~~ild~~ 104 (288)
..+++++|++.|++.+..-. ........++..+|.+|...|+++++++++++.+.+.+..-. ....+.+.+++=..+
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 194 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNF 194 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHH
Confidence 56899999999999998633 223346789999999999999999999999999999833322 444455555544333
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHH
Q 023037 105 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEV 184 (288)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv 184 (288)
... ++++.....++.+++..+..++......+..++|.+|...|+|++|...+++..++++.. .+. .....+
T Consensus 195 ~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~---~~~---~~~~~~ 266 (383)
T 3ulq_A 195 LDL--KQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEES---NIL---PSLPQA 266 (383)
T ss_dssp HHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCG---GGHHHH
T ss_pred HHh--cCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---ccc---hhHHHH
Confidence 322 346677888888888888777777888999999999999999999999999999986554 232 445889
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhcc
Q 023037 185 YAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQ 237 (288)
Q Consensus 185 ~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekd 237 (288)
+..-+.+|..+|++.+|...+.+|+.+.....+|...+.+.. -|.+|...++
T Consensus 267 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 318 (383)
T 3ulq_A 267 YFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEF-LKSLYLSGPD 318 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHTSSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHhCCCc
Confidence 999999999999999999999999999998888877766433 5566666666
No 11
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.49 E-value=1.2e-11 Score=113.88 Aligned_cols=222 Identities=12% Similarity=0.078 Sum_probs=170.1
Q ss_pred CCCHHHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 29 ETDPEGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
.+++++|++.|++.+.... ........++..++.+|...|+++++++++.+.+......-.......+..++-..+..
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA 178 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 5788999999999987632 22344678999999999999999999999999999973332233334444433222211
Q ss_pred CCCcc-----------------hhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 107 SASQN-----------------FSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 107 ~~~~~-----------------~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
. .+ .+.....++.+++.....++......+...+|.+|+..|+|++|...+++..+..+..
T Consensus 179 ~--g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 256 (411)
T 4a1s_A 179 K--GKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF 256 (411)
T ss_dssp H--HHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred c--CcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc
Confidence 1 12 3344445555555554454555556788999999999999999999999998886543
Q ss_pred CCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHH
Q 023037 170 DGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAF 249 (288)
Q Consensus 170 ~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF 249 (288)
.+. .....++..-+.+|..++++.+|...|.+++.+......+...+.+...-|.+|...|+|+.|..+|-++.
T Consensus 257 ---~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 330 (411)
T 4a1s_A 257 ---GDR---AAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHL 330 (411)
T ss_dssp ---TCH---HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---CCc---HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 233 55677888889999999999999999999999999888888889999999999999999999999999999
Q ss_pred hhhhhhCCh
Q 023037 250 KNYDEAGNQ 258 (288)
Q Consensus 250 ~~y~e~g~~ 258 (288)
+.+...+++
T Consensus 331 ~~~~~~~~~ 339 (411)
T 4a1s_A 331 AIAQELGDR 339 (411)
T ss_dssp HHHHHHTCH
T ss_pred HHHHHCCCh
Confidence 998888764
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.48 E-value=1.1e-11 Score=114.66 Aligned_cols=188 Identities=11% Similarity=0.038 Sum_probs=148.9
Q ss_pred CCCCHHHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHh
Q 023037 28 VETDPEGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVT-RNYSEKCINNIMDFV 104 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~-ka~~~k~i~~ild~~ 104 (288)
..+++++|++.|++.+...+ ........++.++|.+|...|+++++++++++.+.+.+.... ....+.+.+++=..+
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y 192 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNY 192 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 57899999999999998743 223456889999999999999999999999999999833222 334555655544433
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHH
Q 023037 105 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEV 184 (288)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv 184 (288)
... ++++.....++.+++..+..++......+..+||.+|...|+|++|...+++....++.. .+. .. ..+
T Consensus 193 ~~~--~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~---~~-~~~ 263 (378)
T 3q15_A 193 DDF--KHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPD---LL-PKV 263 (378)
T ss_dssp HHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGG---GH-HHH
T ss_pred HHh--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CCh---hH-HHH
Confidence 322 346677888888888877777777778999999999999999999999999999875433 222 33 889
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHH
Q 023037 185 YAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 224 (288)
Q Consensus 185 ~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I 224 (288)
+..-+.+|..+|++.+|...+.+|+.+.....+|.....+
T Consensus 264 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 303 (378)
T 3q15_A 264 LFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELF 303 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999999999998887776555444
No 13
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.42 E-value=3.9e-11 Score=110.83 Aligned_cols=211 Identities=9% Similarity=0.002 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhh-h
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN-E 132 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~n-e 132 (288)
...+...|..+...|+++++++++++.+...+..-.....+.+..++-...... .+++.....++.+++..+...+ .
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~--~~~~~A~~~~~~al~~~~~~~~~~ 178 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHM--KQTHVSMYHILQALDIYQNHPLYS 178 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHTSTTCH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHhCCCch
Confidence 445667899999999999999999999998833333444555555544433322 3455667777777777666554 4
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+..++|.+|...|+|++|.+.+++..+.++.. ++. .....++..-+.+|..+|++.+|...|.+|+.+.
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~---~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI---QND---RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCH---HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc---CCH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5667899999999999999999999999999887655 344 6778899999999999999999999999999999
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhcC
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLME 275 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~~ 275 (288)
....+|.. +.....-|.+|...|+|+.|..+|-+|.+...+.|++..... +.+|..+...
T Consensus 253 ~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~--~~~l~~ly~~ 312 (378)
T 3q15_A 253 REKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKEL--FLFLQAVYKE 312 (378)
T ss_dssp HHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHH--HHHHHHHHSS
T ss_pred HhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH--HHHHHHHHhC
Confidence 88888888 888889999999999999999999999999999888766554 4566666543
No 14
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.39 E-value=6.4e-11 Score=101.76 Aligned_cols=220 Identities=12% Similarity=0.038 Sum_probs=163.2
Q ss_pred cCCCCHHHHHHHHHHhhcCCc----cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh--hhhhhHHHHHHHH
Q 023037 27 LVETDPEGALAGFAEVVAMEP----EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSA--VTRNYSEKCINNI 100 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~----e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~--v~ka~~~k~i~~i 100 (288)
...+++++|+..|++.++.-. ........++..+|.+|...|+++++++++++.+...+.. -.......+..++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 356788889999998887522 1223457899999999999999999999999999987333 1223444555554
Q ss_pred HHHhccCCCcchhhHHHHHHHHHHHHHHhh--hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccccc
Q 023037 101 MDFVSGSASQNFSLLREFYQTTLKALEEAK--NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKG 178 (288)
Q Consensus 101 ld~~~~~~~~~~~~~~~~~~~~l~~i~~a~--ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~ 178 (288)
-..+... .+.+.....+..+++..+... +......+..++|.+|...|+|++|...+++..+.+....+.++
T Consensus 92 ~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~---- 165 (283)
T 3edt_B 92 AVLYGKR--GKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDD---- 165 (283)
T ss_dssp HHHHHTT--TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTC----
T ss_pred HHHHHHh--ccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC----
Confidence 4444332 345566667776666655442 23556688999999999999999999999999888654432222
Q ss_pred chHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC-------------------------------------------
Q 023037 179 SQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI------------------------------------------- 215 (288)
Q Consensus 179 ~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I------------------------------------------- 215 (288)
.....++..-+.+|..+|++.+|...|.+++.+....
T Consensus 166 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (283)
T 3edt_B 166 PNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACK 245 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcC
Confidence 5567889999999999999999999999999874321
Q ss_pred CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 216 ~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..+.-.+.....-|.+|...|+|+.|..+|-++.+..
T Consensus 246 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 246 VDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 1234455667778999999999999999999998753
No 15
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.38 E-value=9.4e-11 Score=108.11 Aligned_cols=207 Identities=7% Similarity=0.033 Sum_probs=167.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhh-hhhhHH
Q 023037 59 QTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN-ERLWFK 137 (288)
Q Consensus 59 ~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~n-er~~f~ 137 (288)
..|.++...|+++++++++++.+...+..-.....+.+..++=...... .+.+.....+..+++..+..++ ......
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 185 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYM--KQTYFSMDYARQAYEIYKEHEAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHTCSTTHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 3889999999999999999999998733222333455555544333322 3466777778888887776665 566678
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
+...+|.+|...|+|++|...+++..+..+.. +|. .....++..-+.+|..+|++.+|...|.+|+.+.....+
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~~~---~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAE---KQP---QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc---CCh---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999987665 444 677889999999999999999999999999999998888
Q ss_pred -hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhcCC
Q 023037 218 -PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMES 276 (288)
Q Consensus 218 -p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~~~ 276 (288)
|.. +.+...-|.+|...|+|+.|..+|-+|.+...+.|+|..... +..|+.+....
T Consensus 260 ~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~--~~~l~~~~~~~ 316 (383)
T 3ulq_A 260 LPSL-PQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSE--FEFLKSLYLSG 316 (383)
T ss_dssp GGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH--HHHHHHHHTSS
T ss_pred chhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH--HHHHHHHHhCC
Confidence 655 788888999999999999999999999999999999876655 55677776544
No 16
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.36 E-value=2.2e-10 Score=94.76 Aligned_cols=183 Identities=10% Similarity=0.028 Sum_probs=149.3
Q ss_pred cCCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 27 LVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
+..+++++|++.++.+... ......++..++.++...|+++++++++++.+... ...
T Consensus 3 ~~~g~~~~A~~~~~~~~~~----~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~------------------ 59 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAH----PATASGARFMLGYVYAFMDRFDEARASFQALQQQA-QKS------------------ 59 (203)
T ss_dssp ----CHHHHHHHHHHHHTS----TTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HTT------------------
T ss_pred cccccHHHHHHHHHHhcCC----hHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH-HHc------------------
Confidence 4567889999955554332 12346889999999999999999999999998887 321
Q ss_pred CCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHH
Q 023037 107 SASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYA 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~ 186 (288)
. +......+..++|.+|...|+|+++...+++....+...+ ++. .....++.
T Consensus 60 -~----------------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~---~~~~~~~~ 111 (203)
T 3gw4_A 60 -G----------------------DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLP--EDP---LAASANAY 111 (203)
T ss_dssp -C----------------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCH---HHHHHHHH
T ss_pred -C----------------------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--ccH---HHHHHHHH
Confidence 0 1122234667899999999999999999999999876542 233 46788899
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhH
Q 023037 187 IEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRR 260 (288)
Q Consensus 187 lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a 260 (288)
.-+.+|..+|++.+|...+.+|+.+.....+|...+.....-|.++...|+|+.|..+|-+|.+.+.+.|++..
T Consensus 112 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 185 (203)
T 3gw4_A 112 EVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEA 185 (203)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999754
No 17
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.35 E-value=3e-10 Score=99.37 Aligned_cols=219 Identities=14% Similarity=0.099 Sum_probs=163.5
Q ss_pred CCCCHHHHHHHHHHhhcCCcc----chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh--hhhhhHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPE----KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSA--VTRNYSEKCINNIM 101 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e----~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~--v~ka~~~k~i~~il 101 (288)
..+++++|+..|++++..... .......++..++.+|...|+++++.+++++.+...+.. -.......+..++-
T Consensus 39 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 118 (311)
T 3nf1_A 39 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLA 118 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 468999999999999985221 234457889999999999999999999999999987333 12233444555544
Q ss_pred HHhccCCCcchhhHHHHHHHHHHHHHHh--hhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccc
Q 023037 102 DFVSGSASQNFSLLREFYQTTLKALEEA--KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGS 179 (288)
Q Consensus 102 d~~~~~~~~~~~~~~~~~~~~l~~i~~a--~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~ 179 (288)
..+... .+.+.....++.+++..+.. ++......+...+|.+|...|++++|..++++..+.+....+.++ .
T Consensus 119 ~~~~~~--g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~----~ 192 (311)
T 3nf1_A 119 VLYGKR--GKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDD----P 192 (311)
T ss_dssp HHHHTT--TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTC----H
T ss_pred HHHHHc--CcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC----H
Confidence 444332 23555666666666555443 344666688999999999999999999999999988665433222 5
Q ss_pred hHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc-------------------------------------------CC
Q 023037 180 QLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA-------------------------------------------IP 216 (288)
Q Consensus 180 ~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~-------------------------------------------I~ 216 (288)
....++..-+.+|..+|++.+|...|.+++.+... +.
T Consensus 193 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (311)
T 3nf1_A 193 NVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKV 272 (311)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC--------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCC
Confidence 56788889999999999999999999999986432 11
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.+.-.+.+...-|.+|...|+|++|..+|-++++..
T Consensus 273 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 273 DSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp -CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 334456677788999999999999999999998754
No 18
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.34 E-value=2.5e-10 Score=103.23 Aligned_cols=214 Identities=7% Similarity=-0.010 Sum_probs=158.8
Q ss_pred CCHHHHHHHHHHhhcCCc-------cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 023037 30 TDPEGALAGFAEVVAMEP-------EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMD 102 (288)
Q Consensus 30 ~d~~~Al~~f~~ii~~~~-------e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild 102 (288)
+++++|.+++++..+..+ ...+.....+.+++.+|..+|++++++++|.+.+......-.....+.+.+++-.
T Consensus 5 ~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~ 84 (307)
T 2ifu_A 5 QKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGM 84 (307)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345566666655543211 1122234456667889999999999999999999988333344456666766555
Q ss_pred HhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHH
Q 023037 103 FVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLL 182 (288)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~ll 182 (288)
.+... .+++.....|+.+++.....++......+..++|.+|.. |+|++|...+++...+.+.. ++. ....
T Consensus 85 ~~~~~--g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~---~~~---~~~~ 155 (307)
T 2ifu_A 85 MLKDL--QRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE---ERL---RQAA 155 (307)
T ss_dssp HHHHT--TCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT---TCH---HHHH
T ss_pred HHHhC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC---CCh---hHHH
Confidence 44432 235567777888887766666666667888999999998 99999999999998886543 233 5567
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 183 EVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 183 Ev~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
+++..-+.+|..++++.+|...|.+|+.+......+...+.....-|.+|...+||..|..+|-++. ...
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p 225 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIP 225 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCC
Confidence 8888889999999999999999999999988777766777778888999999999999999999988 443
No 19
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.28 E-value=4.5e-10 Score=88.02 Aligned_cols=159 Identities=16% Similarity=0.059 Sum_probs=134.4
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhh
Q 023037 51 EWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAK 130 (288)
Q Consensus 51 ~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ 130 (288)
.....++..+|.+|...|+++++++++++.+... +.. +
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~-------------------~---------------------- 43 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIA-KEF-------------------G---------------------- 43 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHH-------------------T----------------------
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHh-------------------C----------------------
Confidence 4457889999999999999999999999998887 321 0
Q ss_pred hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHh
Q 023037 131 NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 131 ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~ 210 (288)
+......+...+|.+|...|+|+++...+++..+..+.. ++. .....++..-+.+|..++++.+|...+.+++.
T Consensus 44 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 44 DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL---KDR---AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---CCc---HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 112223566789999999999999999999998886654 344 56678889999999999999999999999999
Q ss_pred hhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCC
Q 023037 211 IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGN 257 (288)
Q Consensus 211 ~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~ 257 (288)
+......|...+.+...-|.+|...|+++.|..+|-++.+.+.+.|+
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~d 164 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGD 164 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhCC
Confidence 99988888888999999999999999999999999999998887664
No 20
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.27 E-value=6.6e-10 Score=99.75 Aligned_cols=198 Identities=9% Similarity=0.036 Sum_probs=139.6
Q ss_pred hhhHHHHHHhhccc--CCCCHHHHHHHHHHhhcCCcc--chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhh
Q 023037 14 TVSRVLCSILEKGL--VETDPEGALAGFAEVVAMEPE--KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVT 89 (288)
Q Consensus 14 ~~~~~~~y~~ak~~--~~~d~~~Al~~f~~ii~~~~e--~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ 89 (288)
--.++..|..|-.+ ..+++++|++.|.+.+...+. .......++.++|.+|..+|++++++++|++.+.+......
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~ 112 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ 112 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC
Confidence 44555666665433 468999999999999987432 22335789999999999999999999999999999833333
Q ss_pred hhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 90 RNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 90 ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
....+.+.+++-..+.... .+++.....|+.+++.....++......+..++|.+|...|+|++|...++++.+..+..
T Consensus 113 ~~~~a~~~~~lg~~~~~~l-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 113 FRRGANFKFELGEILENDL-HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 4445566666554443310 235566677777776655444444445788999999999999999999999999985443
Q ss_pred CCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 170 DGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 170 ~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
+ +. .-...+.+..-+.+|..+|++.+|...|.+++.+......
T Consensus 192 ~---~~--~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 192 R---LS--QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp T---TT--GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred C---cc--cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 1 11 0134556777788999999999999999999887766554
No 21
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.26 E-value=3.6e-10 Score=101.09 Aligned_cols=201 Identities=11% Similarity=0.043 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhh-HHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNY-SEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN 131 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~-~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~n 131 (288)
....+.+.+..+...|+++++.+++++.+... +..+... .......+-..... . .+.+.....++.+++......+
T Consensus 74 ~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~Ai~~~~~al~~~~~~~~ 150 (293)
T 3u3w_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-EYHPEFQQFLQWQYYVAAYVLK-K-VDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHTT-S-SCHHHHHHHHHHHHHTCCCCSC
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHHHHHc-c-cCHHHHHHHHHHHHHHhccccc
Confidence 45667778899999999999999999988754 3222211 12222233332221 1 2344444455544442112222
Q ss_pred hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 132 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 132 er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
......+..++|.+|...|+|++|...++++.+..+..+ ++. ...+.++..-+.+|..++++.+|...+.+|+.+
T Consensus 151 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~--~~~---~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH--DNE---EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS--CCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--cch---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 233457889999999999999999999999988766543 244 677889999999999999999999999999999
Q ss_pred hccCCChhHHHHHHhhcchhhhhhc-cHHHHHHHHHHHHhhhhhhCChhHH
Q 023037 212 KSAIPHPRIMGIIRECGGKMHMAER-QWADAATDFFEAFKNYDEAGNQRRI 261 (288)
Q Consensus 212 a~~I~~p~i~a~I~~~~G~l~~~ek-dy~~A~syF~EaF~~y~e~g~~~a~ 261 (288)
+.....+...|.+...-|.+|...| +|++|..+|-+|.+.+...|++.-.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~~~~ 276 (293)
T 3u3w_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCTGGG
T ss_pred HHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9988888889999999999999999 6899999999999999999987543
No 22
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.22 E-value=6.7e-09 Score=90.68 Aligned_cols=196 Identities=14% Similarity=0.171 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHh-
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV--TRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEA- 129 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v--~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a- 129 (288)
...++..++.+|...|++++++.++++.+...+... .......+...+-..+... .+.+.....++.+++..+..
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQ--NKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999873332 2334444555444433322 23555666666666655544
Q ss_pred -hhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 023037 130 -KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKA 208 (288)
Q Consensus 130 -~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A 208 (288)
.+......+...+|.+|...|+|++|...+++..+.+....+.++ .....++..-+.+|...+++.+|...|.++
T Consensus 104 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~----~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 179 (311)
T 3nf1_A 104 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH----PDVAKQLNNLALLCQNQGKYEEVEYYYQRA 179 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC----hHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 445666788999999999999999999999999888543211122 456788889999999999999999999999
Q ss_pred HhhhccC--CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 209 LAIKSAI--PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 209 ~~~a~~I--~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
+.+.... ..+...+.+...-|.++...|+|+.|..+|-++.+...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 180 LEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9987765 334556677788899999999999999999999986544
No 23
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.21 E-value=6.5e-10 Score=99.35 Aligned_cols=196 Identities=10% Similarity=0.049 Sum_probs=150.0
Q ss_pred cCCCCHHHHHHHHHHhhcCCccchhh--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh
Q 023037 27 LVETDPEGALAGFAEVVAMEPEKAEW--GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 104 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~e~~~~--~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~ 104 (288)
+..+++++|++.++++++..+..... ....+..++.++...|+++++++++++.+....+.-.......+.+++-..+
T Consensus 86 ~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 165 (293)
T 3u3w_A 86 CKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIY 165 (293)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 45789999999999999865432221 2334556999999999999999999999986523222223344555544433
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHh-hhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHH
Q 023037 105 SGSASQNFSLLREFYQTTLKALEEA-KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLE 183 (288)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~i~~a-~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llE 183 (288)
... .+++.....++.+++.++.. .+......+..++|.+|...|+|++|...+++..++++.. ++. ..+.+
T Consensus 166 ~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~---~~~---~~~~~ 237 (293)
T 3u3w_A 166 AEN--GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI---NSM---ALIGQ 237 (293)
T ss_dssp HHT--TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TBC---TTHHH
T ss_pred HHc--CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc---CcH---HHHHH
Confidence 322 34667888888888877766 4667777999999999999999999999999999997654 344 67789
Q ss_pred HHHHHHHHHHhhcC-HHHHHHHHHHHHhhhccCCChhHHHHHHhhcch
Q 023037 184 VYAIEIQMYTETKN-NKKLKQLYQKALAIKSAIPHPRIMGIIRECGGK 230 (288)
Q Consensus 184 v~~lE~~~y~~~~n-~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~ 230 (288)
++..-+.+|..+|+ +.+|...|.+|+.++..+.++.....+..-+|.
T Consensus 238 ~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~~~~~~l~~~~~~ 285 (293)
T 3u3w_A 238 LYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISR 285 (293)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCTGGGGGGTTC---
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999995 699999999999999999988887777665543
No 24
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.21 E-value=9.1e-09 Score=92.21 Aligned_cols=196 Identities=9% Similarity=0.014 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
...+.+.+.+|...|++++++++|.+.+......-.....+.+.+++-..+... .+++.....|+.+++.....++..
T Consensus 37 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~--g~~~~A~~~~~~Al~l~~~~g~~~ 114 (292)
T 1qqe_A 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSG--GNSVNAVDSLENAIQIFTHRGQFR 114 (292)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHcCCHH
Confidence 344555688999999999999999999998733333444566666655444332 245566777777777766555555
Q ss_pred hhHHhhhhHHHHHhhh-cchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 134 LWFKTNLKLCKIWFDM-GEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~-~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
....+..++|.+|... |+|++|...+++..++.+.. ++. ....+++..-+.+|..+|++.+|...|.++..+.
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~---~~~---~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD---QSV---ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT---TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC---CCh---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5668889999999996 99999999999999985543 232 4557888888999999999999999999999988
Q ss_pred ccCCCh-hHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCC
Q 023037 213 SAIPHP-RIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGN 257 (288)
Q Consensus 213 ~~I~~p-~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~ 257 (288)
...+.+ ...+......|.+|...||+..|..+|-++.+.....++
T Consensus 189 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 189 MGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp SSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred hcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 766653 355666777899999999999999999998875554443
No 25
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.18 E-value=1.6e-09 Score=96.76 Aligned_cols=199 Identities=11% Similarity=0.035 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN-YSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka-~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...+...+..+..+|+++++++++.+.+... +..+.. ........+-..... . .+++.....++.+++......+.
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-EYHPEFQQFLQWQYYVAAYVLK-K-VDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CCCHHHHHHHHHHHHHHHHHHT-S-SCHHHHHHHHHHHHTTCCCSSCT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccc-cCChhHHHHHHHHHHHHHHHhc-C-CCHHHHHHHHHHHHHHHhcCCch
Confidence 4566778899999999999999999888765 321111 111111221111111 1 12333344444333322222233
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+...+|.+|...|+|++|...+++..+.++..+ ++. ...+.++..-+.+|..++++.+|...|.+|+.+.
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~--~~~---~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH--DNE---EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC--ccc---cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33467889999999999999999999999987755443 232 3345889999999999999999999999999999
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHH-HHHHHHHHhhhhhhCChhH
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADA-ATDFFEAFKNYDEAGNQRR 260 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A-~syF~EaF~~y~e~g~~~a 260 (288)
....++...+.+...-|.+|...|++++| ..+|-+|.+.+...|++.-
T Consensus 227 ~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~~ 275 (293)
T 2qfc_A 227 CRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAY 275 (293)
T ss_dssp HHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHhh
Confidence 87777888999999999999999999999 8889999999999998755
No 26
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.11 E-value=1e-08 Score=92.53 Aligned_cols=192 Identities=8% Similarity=0.030 Sum_probs=144.4
Q ss_pred hHHHHHHhhccc--CCCCHHHHHHHHHHhhcCCcc--chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh
Q 023037 16 SRVLCSILEKGL--VETDPEGALAGFAEVVAMEPE--KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN 91 (288)
Q Consensus 16 ~~~~~y~~ak~~--~~~d~~~Al~~f~~ii~~~~e--~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka 91 (288)
.++..|..|-.. ..+++++|++.|.+.++..+. .......++.+++.+|..+|++++++++|++.+.+....-...
T Consensus 34 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~ 113 (307)
T 2ifu_A 34 SAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPD 113 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 344455554322 357899999999998886542 2334578999999999999999999999999999983333344
Q ss_pred hHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCC
Q 023037 92 YSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG 171 (288)
Q Consensus 92 ~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~ 171 (288)
..+.+.+++-..+.. .+++.....|+.+++.....++......+..++|.+|...|+|++|...+++..+..+..
T Consensus 114 ~~a~~~~~lg~~~~~---g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-- 188 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP---LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM-- 188 (307)
T ss_dssp HHHHHHHHHHHHHTT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--
Confidence 556777776655543 356677777887777766655555566899999999999999999999999999985543
Q ss_pred CccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 172 TDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 172 ~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
.+. ......+...+.+|..++++.+|...|.+++ +......
T Consensus 189 -~~~---~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 189 -ENY---PTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp -TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred -CCh---hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 222 3456678888999999999999999999999 6555444
No 27
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=7.5e-08 Score=81.59 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=148.9
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHhc
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVT--RNYSEKCINNIMDFVS 105 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~--ka~~~k~i~~ild~~~ 105 (288)
..+++++|++.|.++++.+ +. ..++..+|.+|...|+++++++++++.+... +... ......+...+-..+.
T Consensus 17 ~~~~~~~A~~~~~~a~~~~-~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~l~~~~~ 90 (258)
T 3uq3_A 17 KARQFDEAIEHYNKAWELH-KD----ITYLNNRAAAEYEKGEYETAISTLNDAVEQG-REMRADYKVISKSFARIGNAYH 90 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHS-CC----THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhh-cc----HHHHHHHHHHHHHcccHHHHHHHHHHHHHhC-cccccchHHHHHHHHHHHHHHH
Confidence 4689999999999999876 22 3678899999999999999999999999887 5431 1111233333332222
Q ss_pred cCCCcchhhHHHHHHHHHH-------------------HHHHhh-hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHh
Q 023037 106 GSASQNFSLLREFYQTTLK-------------------ALEEAK-NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKS 165 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~-------------------~i~~a~-ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~ 165 (288)
.. .+++.....++.+++ .++.+. .......+...+|.+++..|+|++|...++++.+.
T Consensus 91 ~~--~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 168 (258)
T 3uq3_A 91 KL--GDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR 168 (258)
T ss_dssp HT--TCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred Hc--ccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 21 123333333333333 222111 12233467789999999999999999999999888
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHH
Q 023037 166 CQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDF 245 (288)
Q Consensus 166 ~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF 245 (288)
.+ ++ .+++..-+.+|...+++.+|...+.+++...... | .....-|.++...|+|+.|..+|
T Consensus 169 ~~-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~----~~~~~l~~~~~~~g~~~~A~~~~ 230 (258)
T 3uq3_A 169 AP-----ED-------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF--V----RAYIRKATAQIAVKEYASALETL 230 (258)
T ss_dssp CT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H----HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred Cc-----cc-------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH--H----HHHHHHHHHHHHHhhHHHHHHHH
Confidence 22 12 3678888999999999999999999998864321 2 34456688999999999999999
Q ss_pred HHHHhhhhhhCC-hhHHHHhH
Q 023037 246 FEAFKNYDEAGN-QRRIQCLK 265 (288)
Q Consensus 246 ~EaF~~y~e~g~-~~a~~~LK 265 (288)
-++.+...+.++ |.-..+..
T Consensus 231 ~~a~~~~~~~~~~p~~~~~~~ 251 (258)
T 3uq3_A 231 DAARTKDAEVNNGSSAREIDQ 251 (258)
T ss_dssp HHHHHHHHHHHTTTTHHHHHH
T ss_pred HHHHHhChhhcCCCchHHHHH
Confidence 999998876554 54444443
No 28
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.10 E-value=6.7e-09 Score=92.70 Aligned_cols=187 Identities=9% Similarity=0.024 Sum_probs=141.7
Q ss_pred CCCCHHHHHHHHHHhhcCCcc--chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhc
Q 023037 28 VETDPEGALAGFAEVVAMEPE--KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e--~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~ 105 (288)
..+++++|++.+++.++..+. ........+..++.++...|+++++++++++.+..............+.+++-..+.
T Consensus 87 ~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 2qfc_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 578999999999999987542 122234556779999999999999999999998776222222233445555433333
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHhhhhh-hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHH
Q 023037 106 GSASQNFSLLREFYQTTLKALEEAKNER-LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEV 184 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~i~~a~ner-~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv 184 (288)
.. .+++.....++.+++..+...+.. ....+..++|.+|...|+|++|...+++..+.+... ++. ..+..+
T Consensus 167 ~~--~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~---~~~---~~~~~~ 238 (293)
T 2qfc_A 167 EN--GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI---NSM---ALIGQL 238 (293)
T ss_dssp HT--TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TBC---SSHHHH
T ss_pred Hc--CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhc---CcH---HHHHHH
Confidence 22 346677778888887766655443 334889999999999999999999999999886543 344 677899
Q ss_pred HHHHHHHHHhhcCHHHH-HHHHHHHHhhhccCCChhHHH
Q 023037 185 YAIEIQMYTETKNNKKL-KQLYQKALAIKSAIPHPRIMG 222 (288)
Q Consensus 185 ~~lE~~~y~~~~n~~ka-k~~y~~A~~~a~~I~~p~i~a 222 (288)
|..-+.+|..+|++.+| ...|.+|+.+...+.++...-
T Consensus 239 ~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~~~~ 277 (293)
T 2qfc_A 239 YYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKE 277 (293)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHhhHH
Confidence 99999999999999999 999999999999998865533
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.06 E-value=3.1e-08 Score=89.11 Aligned_cols=225 Identities=14% Similarity=0.102 Sum_probs=144.5
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhh------------hhHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTR------------NYSEK 95 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~k------------a~~~k 95 (288)
..+++++|++.|++++..+++. ..++..+|.+|...|+++++++++++.+... +.... ...++
T Consensus 76 ~~g~~~~A~~~~~~al~~~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~ 150 (368)
T 1fch_A 76 QEGDLPNAVLLFEAAVQQDPKH----MEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQ 150 (368)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHH
Confidence 4678899999999998876542 3466788888888888888888888877664 32111 11122
Q ss_pred HHHHHHHHhccCCCcc---------------------hh--hHHHHHHHHHHHHHHhhhh-hh--hHHhhhhHHHHHhhh
Q 023037 96 CINNIMDFVSGSASQN---------------------FS--LLREFYQTTLKALEEAKNE-RL--WFKTNLKLCKIWFDM 149 (288)
Q Consensus 96 ~i~~ild~~~~~~~~~---------------------~~--~~~~~~~~~l~~i~~a~ne-r~--~f~~~~kL~~lyl~~ 149 (288)
++..+-..+...|+.. .. ....-++.+.+.++.+-.. .. ...+...+|.+|...
T Consensus 151 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~ 230 (368)
T 1fch_A 151 ACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLS 230 (368)
T ss_dssp HHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHc
Confidence 2221111111111100 00 0112233333333332211 11 346778999999999
Q ss_pred cchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcc
Q 023037 150 GEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGG 229 (288)
Q Consensus 150 ~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G 229 (288)
|+|++|...++++.+..+ ++ .+++..-+.+|...|++.+|...|.+++.+... +| .....-|
T Consensus 231 g~~~~A~~~~~~al~~~~-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~--~~----~~~~~l~ 292 (368)
T 1fch_A 231 GEYDKAVDCFTAALSVRP-----ND-------YLLWNKLGATLANGNQSEEAVAAYRRALELQPG--YI----RSRYNLG 292 (368)
T ss_dssp TCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCc-----CC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--cH----HHHHHHH
Confidence 999999999999988822 22 367888899999999999999999999987421 12 4456678
Q ss_pred hhhhhhccHHHHHHHHHHHHhhhhhhCChh------HHHHhHHHHHHHHhcC
Q 023037 230 KMHMAERQWADAATDFFEAFKNYDEAGNQR------RIQCLKYLVLANMLME 275 (288)
Q Consensus 230 ~l~~~ekdy~~A~syF~EaF~~y~e~g~~~------a~~~LKY~~L~~il~~ 275 (288)
.++...|+|+.|..+|-++.+.....++|. ...++..+..|-...+
T Consensus 293 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 344 (368)
T 1fch_A 293 ISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLG 344 (368)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhC
Confidence 999999999999999999998776553332 1345444544444443
No 30
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.05 E-value=2.4e-08 Score=90.42 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=85.6
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I 215 (288)
..+...+|.+|...|+|++|...++++.+..+ ++ .+++..-+.+|...|++.+|...|.+++.+.
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--- 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP-----ED-------YSLWNRLGATLANGDRSEEAVEAYTRALEIQ--- 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-----CC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---
Confidence 45678899999999999999999999998832 22 3578888999999999999999999999873
Q ss_pred CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCC
Q 023037 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGN 257 (288)
Q Consensus 216 ~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~ 257 (288)
|.. +.....-|.++...|+|+.|..+|-++.+.....++
T Consensus 278 --p~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 316 (365)
T 4eqf_A 278 --PGF-IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRN 316 (365)
T ss_dssp --TTC-HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC--
T ss_pred --CCc-hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCC
Confidence 322 445566789999999999999999999998866444
No 31
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.04 E-value=2.6e-08 Score=87.61 Aligned_cols=195 Identities=13% Similarity=0.031 Sum_probs=132.5
Q ss_pred CHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCc
Q 023037 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQ 110 (288)
Q Consensus 31 d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~ 110 (288)
++++|++.|++++..+++.. .++..++.++...|+++++++++++.+... +........ +-..+.. . .
T Consensus 106 ~~~~A~~~~~~a~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~-----l~~~~~~-~-~ 173 (330)
T 3hym_B 106 KNEHARRYLSKATTLEKTYG----PAWIAYGHSFAVESEHDQAMAAYFTAAQLM-KGCHLPMLY-----IGLEYGL-T-N 173 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCT----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCSHHHHH-----HHHHHHH-T-T
T ss_pred hHHHHHHHHHHHHHhCCccH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhc-cccHHHHHH-----HHHHHHH-H-h
Confidence 77888888888887765422 345678888888888888888888887776 442222111 1111111 1 1
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHH
Q 023037 111 NFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQ 190 (288)
Q Consensus 111 ~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~ 190 (288)
+.+.....++.+ ++.. .....+...+|.+|...|++++|...++++.+..+..++.... ....+++..-+.
T Consensus 174 ~~~~A~~~~~~a---l~~~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~la~ 244 (330)
T 3hym_B 174 NSKLAERFFSQA---LSIA---PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTV---DKWEPLLNNLGH 244 (330)
T ss_dssp CHHHHHHHHHHH---HTTC---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTT---TTCCHHHHHHHH
T ss_pred hHHHHHHHHHHH---HHhC---CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccc---cHHHHHHHHHHH
Confidence 222222333222 2222 2224667889999999999999999999999986554322111 333578888899
Q ss_pred HHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 191 MYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 191 ~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+|..+|++.+|...|.+++.+... +| .+...-|.++...|+|+.|..+|-++.+..
T Consensus 245 ~~~~~g~~~~A~~~~~~a~~~~~~--~~----~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 300 (330)
T 3hym_B 245 VCRKLKKYAEALDYHRQALVLIPQ--NA----STYSAIGYIHSLMGNFENAVDYFHTALGLR 300 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT--CS----HHHHHHHHHHHHHTCHHHHHHHHHTTTTTC
T ss_pred HHHHhcCHHHHHHHHHHHHhhCcc--ch----HHHHHHHHHHHHhccHHHHHHHHHHHHccC
Confidence 999999999999999999987543 22 234455888999999999999999988754
No 32
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.04 E-value=1.9e-08 Score=86.84 Aligned_cols=207 Identities=11% Similarity=0.046 Sum_probs=124.7
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++++.. ++...+...++..+|.+|...|+++++++++++.+... +.... +..++-..+...
T Consensus 50 ~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~-~~~~~-----~~~~l~~~~~~~- 121 (272)
T 3u4t_A 50 LAKYDLAQKDIETYFSK-VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD-TTRLD-----MYGQIGSYFYNK- 121 (272)
T ss_dssp TTCHHHHHHHHHHHHTT-SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTH-----HHHHHHHHHHHT-
T ss_pred HhhHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC-cccHH-----HHHHHHHHHHHc-
Confidence 34556666666666652 22333334555666666666666666666666665544 32211 111111111111
Q ss_pred CcchhhHHHHHHHHHHHHHHhhh-hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKN-ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~n-er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+ ++.+.+.++.+-. ......+...+|...+..++|++|...++++.+.. .. . .+.+..
T Consensus 122 -~~-------~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-------p~---~--~~~~~~ 181 (272)
T 3u4t_A 122 -GN-------FPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELK-------PN---I--YIGYLW 181 (272)
T ss_dssp -TC-------HHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-------TT---C--HHHHHH
T ss_pred -cC-------HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------cc---c--hHHHHH
Confidence 11 1222233222211 12223455667733334458888888888777772 11 1 366777
Q ss_pred HHHHHHhhcC---HHHHHHHHHHHHhhhccCCCh--hHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHH
Q 023037 188 EIQMYTETKN---NKKLKQLYQKALAIKSAIPHP--RIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQ 262 (288)
Q Consensus 188 E~~~y~~~~n---~~kak~~y~~A~~~a~~I~~p--~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~ 262 (288)
-+.++..+++ +.+|...|.++..+....+.| .....+...-|.+|...|+|++|..+|-++.+.. .+++.+.+
T Consensus 182 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--p~~~~a~~ 259 (272)
T 3u4t_A 182 RARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALD--PTNKKAID 259 (272)
T ss_dssp HHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHH
T ss_pred HHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--ccHHHHHH
Confidence 7888888888 888999999999998777774 4455667778999999999999999999999865 46677766
Q ss_pred HhH
Q 023037 263 CLK 265 (288)
Q Consensus 263 ~LK 265 (288)
.|.
T Consensus 260 ~l~ 262 (272)
T 3u4t_A 260 GLK 262 (272)
T ss_dssp HHC
T ss_pred Hhh
Confidence 654
No 33
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.02 E-value=2.2e-07 Score=84.55 Aligned_cols=213 Identities=8% Similarity=-0.052 Sum_probs=143.9
Q ss_pred CCCCHHHHHHHHHHhhcCCccc-hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHhc
Q 023037 28 VETDPEGALAGFAEVVAMEPEK-AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN-YSEKCINNIMDFVS 105 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~-~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka-~~~k~i~~ild~~~ 105 (288)
..+++++|+..+++.+...++. ..+...++..++.++...|+++++.+++++.+... +..+.. ....+..++-....
T Consensus 26 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~la~~~~ 104 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA-RQHDVWHYALWSLIQQSEILF 104 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999876532 33456788999999999999999999999999988 433221 22222222211111
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHhhhh--hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHH
Q 023037 106 GSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLE 183 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~i~~a~ne--r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llE 183 (288)
. . .+++.....++.+++.....+.. .....+...++.+|...|+++++...+++....++.. .+. . .+.
T Consensus 105 ~-~-G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~~~---~-~~~ 175 (373)
T 1hz4_A 105 A-Q-GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY---QPQ---Q-QLQ 175 (373)
T ss_dssp H-T-TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS---CGG---G-GHH
T ss_pred H-C-CCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc---CcH---H-HHH
Confidence 1 2 23445556666666554443332 2344677889999999999999999999999987654 232 2 457
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCh-hHHHHHHhhcchhhhhhccHHHHHHHHHHHHh
Q 023037 184 VYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHP-RIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (288)
Q Consensus 184 v~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p-~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~ 250 (288)
++..-+.++...|++.+|...+..+..+......| ...+.+...-+.++...|+++.|..++-++.+
T Consensus 176 ~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~ 243 (373)
T 1hz4_A 176 CLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAK 243 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCC
Confidence 88888999999999999999999999887654443 33333222233334455555555555554443
No 34
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.98 E-value=2.4e-09 Score=102.05 Aligned_cols=183 Identities=17% Similarity=0.197 Sum_probs=136.7
Q ss_pred HHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhh-------------------------
Q 023037 95 KCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDM------------------------- 149 (288)
Q Consensus 95 k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~------------------------- 149 (288)
.-|+++|+.+....+ ++....+++ ++..-++|+|+.+..+|..++.+.
T Consensus 5 ~~i~~~l~~~~~~~~--~~l~~~~~~-----le~~~~~kLWhqlt~~L~~~~~~~~~~~~~~~ly~~fi~~f~~kin~L~ 77 (393)
T 4b4t_O 5 HEIDTILSTLRMEAD--PSLHPLFEQ-----FEKFYEEKLWFQLSESLTKFFDDAKSTPLRLRLYDNFVSKFYDKINQLS 77 (393)
T ss_dssp HHHHHHHHHHHCSSC--SSCCSSHHH-----HHHHHCCSSCCSCCCTTHHHHCCCSSCCCCHHHHHHHHHHHHHHSCSHH
T ss_pred hhHHHHHHHHHhcCC--HHHHHHHHH-----HHHHHHHhHHHHHHHHHHHHHhChhcchHHHHHHHHHHHHHHHhcCHHH
Confidence 357788888876532 334444544 555568899987777776665443
Q ss_pred ------------cchhHHHHHHHHHHHhccCCCCCc-----cccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 150 ------------GEYGRMSKILKELHKSCQREDGTD-----DQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 150 ------------~~y~~~~~ll~elkk~~~~~~~~d-----Dk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.+.+++.+.+.++...+...++.. .+......+.+.....++|...++.+.|+..+.++...-
T Consensus 78 lv~~~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l 157 (393)
T 4b4t_O 78 VVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTL 157 (393)
T ss_dssp HHHTTHHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhh
Confidence 344445566666655443221110 000114456777888999999999999999999999887
Q ss_pred ccCCC--hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh--hCChhHHHHhHHHHHHHHhcCCCCCCCCCC
Q 023037 213 SAIPH--PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE--AGNQRRIQCLKYLVLANMLMESEVNPFDGQ 284 (288)
Q Consensus 213 ~~I~~--p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e--~g~~~a~~~LKY~~L~~il~~~~~dpF~s~ 284 (288)
..... |++.+...+++|.+|..+++|..++.+++.++.+++. .+++...+++.|.++..++++..+.||+..
T Consensus 158 ~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~all~~~i~~f~eL 233 (393)
T 4b4t_O 158 DKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGEL 233 (393)
T ss_dssp HHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSSCSHHHHHHHHHHHHHHHHHCCSSCSTHHH
T ss_pred hccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHcCCCCCChHHH
Confidence 77654 8999999999999999999999999999999999985 467899999999999999999999999753
No 35
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.97 E-value=1.6e-07 Score=83.14 Aligned_cols=204 Identities=9% Similarity=0.099 Sum_probs=144.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|.+++...++. ..++..++.++...|+++++++++++.+... +..+. ....+-......
T Consensus 132 ~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~-----~~~~la~~~~~~ 201 (359)
T 3ieg_A 132 DGADYTAAITFLDKILEVCVWD----AELRELRAECFIKEGEPRKAISDLKAASKLK-SDNTE-----AFYKISTLYYQL 201 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-SCCHH-----HHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCc----hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHH-----HHHHHHHHHHHc
Confidence 4678999999999999876543 3567899999999999999999999998765 43222 222222222111
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhh-h--H------HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccccc
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERL-W--F------KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKG 178 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~-~--f------~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~ 178 (288)
.+.+.....++ +.++...+... | + ...+.+|.++...|+|++|...++++.+..+ ++.
T Consensus 202 --~~~~~A~~~~~---~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~~--- 268 (359)
T 3ieg_A 202 --GDHELSLSEVR---ECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEP-----SVA--- 268 (359)
T ss_dssp --TCHHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-----SSH---
T ss_pred --CCHHHHHHHHH---HHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----Cch---
Confidence 12323333333 33333322221 1 1 2356779999999999999999999998842 333
Q ss_pred chHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCCh
Q 023037 179 SQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQ 258 (288)
Q Consensus 179 ~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~ 258 (288)
....+++..-+.+|...+++.+|...|.++.... |.- +.+...-|.++...|+|+.|..+|-++.+... +++
T Consensus 269 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p--~~~ 340 (359)
T 3ieg_A 269 EYTVRSKERICHCFSKDEKPVEAIRICSEVLQME-----PDN-VNALKDRAEAYLIEEMYDEAIQDYEAAQEHNE--NDQ 340 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT--TCH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----ccc-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CCh
Confidence 5667888899999999999999999999998872 221 23556678899999999999999999998653 344
Q ss_pred hHHH
Q 023037 259 RRIQ 262 (288)
Q Consensus 259 ~a~~ 262 (288)
....
T Consensus 341 ~~~~ 344 (359)
T 3ieg_A 341 QIRE 344 (359)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 36
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.96 E-value=1.1e-07 Score=81.29 Aligned_cols=184 Identities=12% Similarity=0.115 Sum_probs=137.5
Q ss_pred HHcCCHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHh--hhhhhhHHhhh
Q 023037 65 YRLGKYKEMMDAYREMLTYIKSAV--TRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEA--KNERLWFKTNL 140 (288)
Q Consensus 65 ~~~g~~~~~l~~~~~~l~~~~~~v--~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a--~ner~~f~~~~ 140 (288)
...|+++++.++|++.+..++... .......+...+-..+... .+++.....++.+++..+.. .+......+..
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQ--NKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 457899999999999999984433 2233444555544333322 33556666666666665544 44566678999
Q ss_pred hHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC--CCh
Q 023037 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI--PHP 218 (288)
Q Consensus 141 kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I--~~p 218 (288)
++|.+|...|+|++|...+++..+.++...+.++ ....+++..-+.+|..++++.+|...|.+++.+...+ +++
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 165 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH----PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDD 165 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC----hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999888654322222 4567899999999999999999999999999986544 334
Q ss_pred hHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 219 RIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 219 ~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
...+.+...-|.++...|+|+.|..+|-++.+...+
T Consensus 166 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 166 PNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 456677778899999999999999999999987654
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.95 E-value=1.1e-07 Score=86.15 Aligned_cols=195 Identities=9% Similarity=-0.024 Sum_probs=132.1
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++. ..++..+|.+|...|++++++++|++.+..- +... .+...+-..+...
T Consensus 77 ~~g~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~-----~~~~~l~~~~~~~ 146 (365)
T 4eqf_A 77 KEGDLPVTILFMEAAILQDPGD----AEAWQFLGITQAENENEQAAIVALQRCLELQ-PNNL-----KALMALAVSYTNT 146 (365)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH-----HHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHHhCcCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCH-----HHHHHHHHHHHcc
Confidence 4578999999999999887643 4578899999999999999999999998876 5432 2333333323222
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhh------HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLW------FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQL 181 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~------f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~l 181 (288)
.+.+.....++.+++.-.. +...+ ..+..+++.+|...|++++|..+++++.+..+. ..-
T Consensus 147 --g~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~----------~~~ 212 (365)
T 4eqf_A 147 --SHQQDACEALKNWIKQNPK--YKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGD----------MID 212 (365)
T ss_dssp --TCHHHHHHHHHHHHHHCHH--HHCC-------------------CCHHHHHHHHHHHHHHHHSCS----------SCC
T ss_pred --ccHHHHHHHHHHHHHhCcc--chHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcC----------ccC
Confidence 2233444444444432111 11111 244567899999999999999999999998322 112
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 182 LEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 182 lEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.+++..-+.+|..++++.+|...|.+++.....- +.+...-|.++...|+|+.|..+|-++.+..
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED------YSLWNRLGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 3677788999999999999999999999874321 2345667889999999999999999998753
No 38
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.95 E-value=1.7e-07 Score=81.60 Aligned_cols=198 Identities=9% Similarity=0.082 Sum_probs=134.8
Q ss_pred HHHHhhccc-CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 023037 19 LCSILEKGL-VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCI 97 (288)
Q Consensus 19 ~~y~~ak~~-~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i 97 (288)
..|..|... ..+++++|++.|++++...++. .+...++..+|.+|..+|+++++++.|++++... |.-
T Consensus 17 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~-~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-p~~--------- 85 (261)
T 3qky_A 17 EAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH-EWAADAQFYLARAYYQNKEYLLAASEYERFIQIY-QID--------- 85 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS-TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC---------
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-CCC---------
Confidence 345555553 5789999999999999987643 3457899999999999999999999999887765 321
Q ss_pred HHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh--------hcchhHHHHHHHHHHHhccCC
Q 023037 98 NNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD--------MGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 98 ~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~--------~~~y~~~~~ll~elkk~~~~~ 169 (288)
+. .......+|.+|+. .|++++|...++++.+..+..
T Consensus 86 ----------~~-------------------------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 86 ----------PR-------------------------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp ----------TT-------------------------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred ----------ch-------------------------hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 00 01224456666666 999999999999998884332
Q ss_pred CCCcccc-----ccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhh----------h
Q 023037 170 DGTDDQK-----KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHM----------A 234 (288)
Q Consensus 170 ~~~dDk~-----~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~----------~ 234 (288)
+...+-. ....+.+.+..-+.+|..+|++.+|...|.+++.....-+. ........|.+|. .
T Consensus 131 ~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~---~~~a~~~l~~~~~~~g~~~~~~~~ 207 (261)
T 3qky_A 131 ELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPW---ADDALVGAMRAYIAYAEQSVRARQ 207 (261)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---HHHHHHHHHHHHHHHHHTSCGGGH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCch---HHHHHHHHHHHHHHhcccchhhcc
Confidence 1000000 00011222367789999999999999999999876543222 1222233355554 3
Q ss_pred hccHHHHHHHHHHHHhhhhhhCChhHHHHhHHH
Q 023037 235 ERQWADAATDFFEAFKNYDEAGNQRRIQCLKYL 267 (288)
Q Consensus 235 ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~ 267 (288)
.++|+.|...|-++.+.+- +++.+..+...+
T Consensus 208 ~~~~~~A~~~~~~~~~~~p--~~~~~~~a~~~l 238 (261)
T 3qky_A 208 PERYRRAVELYERLLQIFP--DSPLLRTAEELY 238 (261)
T ss_dssp HHHHHHHHHHHHHHHHHCT--TCTHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHCC--CChHHHHHHHHH
Confidence 4999999999999999874 556555554443
No 39
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.92 E-value=2.8e-07 Score=81.57 Aligned_cols=204 Identities=10% Similarity=0.028 Sum_probs=140.0
Q ss_pred CCCHHHHHHHHHHhhcCCc---cchh-hH-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 023037 29 ETDPEGALAGFAEVVAMEP---EKAE-WG-------FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCI 97 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~---e~~~-~~-------~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i 97 (288)
.+++++|++.|++++...+ +... |. ......++.++...|+++++++++++.+... +.-+ ...
T Consensus 84 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~-----~~~ 157 (359)
T 3ieg_A 84 QGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC-VWDA-----ELR 157 (359)
T ss_dssp HTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH-----HHH
T ss_pred cCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCch-----HHH
Confidence 5788999999999998876 3221 11 2223455899999999999999999998876 5322 222
Q ss_pred HHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccc--
Q 023037 98 NNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQ-- 175 (288)
Q Consensus 98 ~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk-- 175 (288)
..+-..+.... +++.....++ +.++.. .....+...+|.+|...|+++++...++++.+..+.. .+.
T Consensus 158 ~~~~~~~~~~~--~~~~A~~~~~---~~~~~~---~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~~~ 226 (359)
T 3ieg_A 158 ELRAECFIKEG--EPRKAISDLK---AASKLK---SDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDH---KRCFA 226 (359)
T ss_dssp HHHHHHHHHTT--CHHHHHHHHH---HHHTTC---SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHH
T ss_pred HHHHHHHHHCC--CHHHHHHHHH---HHHHhC---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc---hHHHH
Confidence 22222222211 2223333333 222211 2233677899999999999999999999999883321 110
Q ss_pred -cccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 176 -KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 176 -~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
-.....++.....+.++...+++.+|...|.++...... +|.....+...-|.++...|+|+.|..+|-++.+.
T Consensus 227 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 227 HYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 000111333456688899999999999999999987643 47777777788899999999999999999999886
No 40
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.91 E-value=1.9e-07 Score=79.92 Aligned_cols=194 Identities=14% Similarity=0.121 Sum_probs=122.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|+..|++++..+|+. ..++..+|.++.+.|++++++++|++.+..- |.-+.+....+.- +......
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~--~~~~~~~ 89 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQD----PEALYWLARTQLKLGLVNPALENGKTLVART-PRYLGGYMVLSEA--YVALYRQ 89 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHH--HHHhhhh
Confidence 4678999999999999988753 3467899999999999999999999999887 6543332221111 1111000
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhh-hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKN-ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYA 186 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~n-er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~ 186 (288)
. .........++.+.+.++.+-. .-....+...+|.+|...|++++|...+++..+. + . . .+++.
T Consensus 90 ~-~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------~-~---~--~~~~~ 155 (217)
T 2pl2_A 90 A-EDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALAL-------E-D---T--PEIRS 155 (217)
T ss_dssp C-SSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------C-C---C--HHHHH
T ss_pred h-hhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhc-------c-c---c--hHHHH
Confidence 0 0000111233333333333221 1223356679999999999999999999999998 3 1 1 36778
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHH
Q 023037 187 IEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEA 248 (288)
Q Consensus 187 lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~Ea 248 (288)
.-+.+|..+|++.+|...|.+++..... +| .+...-|.++...|+++.|..+|-++
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~P~--~~----~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQAPK--DL----DLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTT--CH----HHHHHHHHHHTC--------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC--Ch----HHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 8899999999999999999999886422 13 33445588899999999999887665
No 41
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.91 E-value=4.7e-07 Score=82.38 Aligned_cols=202 Identities=6% Similarity=-0.083 Sum_probs=147.6
Q ss_pred chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHH
Q 023037 49 KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEE 128 (288)
Q Consensus 49 ~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~ 128 (288)
...+...+....+.++...|+++++.+++++.+... +.-.......+...+-..... . .+++.....++.+++....
T Consensus 9 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~-~-g~~~~A~~~~~~al~~~~~ 85 (373)
T 1hz4_A 9 EDTMHAEFNALRAQVAINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHC-K-GELTRSLALMQQTEQMARQ 85 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHH-H-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHh-c-CcHHHHHHHHHHHHHHHHh
Confidence 345566778889999999999999999999998876 432211112222222111111 1 2344556666666666555
Q ss_pred hhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 023037 129 AKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKA 208 (288)
Q Consensus 129 a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A 208 (288)
.++......+...++.++...|+|+++...+++..+.....++.+. .....++..-+.+|..+|++.+|...+.++
T Consensus 86 ~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 161 (373)
T 1hz4_A 86 HDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL----PMHEFLVRIRAQLLWAWARLDEAEASARSG 161 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS----THHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC----cHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 5554555577889999999999999999999999988654432111 345667778899999999999999999999
Q ss_pred HhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCCh
Q 023037 209 LAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQ 258 (288)
Q Consensus 209 ~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~ 258 (288)
+.+.....+|. .+......|.++...|+++.|..+|-++.+.....+.+
T Consensus 162 l~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~ 210 (373)
T 1hz4_A 162 IEVLSSYQPQQ-QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYH 210 (373)
T ss_dssp HHHTTTSCGGG-GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHhhccCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcc
Confidence 99988776655 44666778999999999999999999998877666654
No 42
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.89 E-value=2e-07 Score=81.91 Aligned_cols=104 Identities=12% Similarity=-0.025 Sum_probs=80.8
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|.+|...|++++|...++++.+..+ ++ .+++..-+.+|...+++.+|...+.++........
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 227 (330)
T 3hym_B 160 LPMLYIGLEYGLTNNSKLAERFFSQALSIAP-----ED-------PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIG 227 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC-----CC-------hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcc
Confidence 3445589999999999999999998887732 12 36677788999999999999999999998876544
Q ss_pred Ch---hHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 217 HP---RIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 217 ~p---~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.+ .-.+.+...-|.++...|+|+.|..+|-++.+..
T Consensus 228 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 228 NEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp CSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred ccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 42 2224455667888999999999999999988754
No 43
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.89 E-value=1.1e-07 Score=78.01 Aligned_cols=155 Identities=14% Similarity=0.183 Sum_probs=108.2
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|+++++.+|+. ..++..+|.+|.+.|+++++++.+...+... +........... ....
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~- 85 (184)
T 3vtx_A 17 TKGDFDGAIRAYKKVLKADPNN----VETLLKLGKTYMDIGLPNDAIESLKKFVVLD-TTSAEAYYILGS-----ANFM- 85 (184)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHH-----HHHH-
T ss_pred HcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-chhHHHHHHHHH-----HHHH-
Confidence 3589999999999999987753 3578899999999999999999999988776 443322221111 1111
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
. .+.+.....+. +.++.. .........+|.+|...|+|++|...++++.+..+ ++ .+++..
T Consensus 86 ~-~~~~~a~~~~~---~a~~~~---~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p-----~~-------~~~~~~ 146 (184)
T 3vtx_A 86 I-DEKQAAIDALQ---RAIALN---TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP-----GF-------IRAYQS 146 (184)
T ss_dssp T-TCHHHHHHHHH---HHHHHC---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHH
T ss_pred c-CCHHHHHHHHH---HHHHhC---ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc-----hh-------hhHHHH
Confidence 1 11222222222 222221 22235667889999999999999999999888822 22 367888
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
-+.+|..+|++.+|...|.+|+.+.
T Consensus 147 lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 147 IGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 8899999999999999999998764
No 44
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.89 E-value=9.6e-07 Score=81.62 Aligned_cols=202 Identities=9% Similarity=0.035 Sum_probs=141.3
Q ss_pred CCCHHHHHHHHHHhhcCCccch----hh-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 023037 29 ETDPEGALAGFAEVVAMEPEKA----EW-------GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCI 97 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~----~~-------~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i 97 (288)
.+++++|++.|++++...++.. -| .......++.++...|+++++++++++.+... +.-. ...
T Consensus 107 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~-----~~~ 180 (450)
T 2y4t_A 107 QGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVC-VWDA-----ELR 180 (450)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCH-----HHH
T ss_pred cCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCh-----HHH
Confidence 5788899999999998776422 12 11234556888999999999999999998765 4322 233
Q ss_pred HHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccc
Q 023037 98 NNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKK 177 (288)
Q Consensus 98 ~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~ 177 (288)
..+.+.+... .+.+.....++.+++. . .....+...+|.+|...|++++|...++++.+..+. +..-
T Consensus 181 ~~l~~~~~~~--g~~~~A~~~~~~~~~~---~---~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~-----~~~~ 247 (450)
T 2y4t_A 181 ELRAECFIKE--GEPRKAISDLKAASKL---K---NDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQD-----HKRC 247 (450)
T ss_dssp HHHHHHHHHT--TCGGGGHHHHHHHHHH---H---CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----CHHH
T ss_pred HHHHHHHHHC--CCHHHHHHHHHHHHHh---C---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----hHHH
Confidence 3333333322 1233444444444332 2 122456788999999999999999999999887332 2100
Q ss_pred cch-----HHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 178 GSQ-----LLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 178 ~~~-----llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
-.. .++.+...+.+|...+++.+|...|.+++.+... +|.....+..+-|.++...|+|+.|..+|-++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 248 FAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 001 1233344589999999999999999999986533 57777888899999999999999999999998875
No 45
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.89 E-value=2e-07 Score=86.10 Aligned_cols=207 Identities=12% Similarity=-0.003 Sum_probs=161.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhhh------------hhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHH
Q 023037 59 QTVKLYYRLGKYKEMMDAYREMLTYIKSAV------------TRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKAL 126 (288)
Q Consensus 59 ~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v------------~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i 126 (288)
+-++-+.+.|+|++|++.|.+++... +.. .....++++.++...+... ++++.....+..+++..
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~--~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKD-SSQSSAAAGASVDDKRRNEQETSILELGQLYVTM--GAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSC-CCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhC-cccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHH
Confidence 44667788999999999999998865 321 1234556777766655433 34666667777776665
Q ss_pred HHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHH
Q 023037 127 EEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQ 206 (288)
Q Consensus 127 ~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~ 206 (288)
...+..+....+...++.++...|+++++..++++...++... .+. .....++..-+++|...|++.+|...+.
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~~---~~~~~~~~~la~~~~~~g~~~~A~~~l~ 159 (434)
T 4b4t_Q 86 MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE---KRV---FLKHSLSIKLATLHYQKKQYKDSLALIN 159 (434)
T ss_dssp HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS---SCC---SSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh---Ccc---HHHHHHHHHHHHHHHHccChHHHHHHHH
Confidence 5544444444667788999999999999999999998886554 222 4557888888999999999999999999
Q ss_pred HHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhc
Q 023037 207 KALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM 274 (288)
Q Consensus 207 ~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~ 274 (288)
.+.............+.+...-|.+|...|||.+|..++-.|.+.....++|...+..-|..+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (434)
T 4b4t_Q 160 DLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHC 227 (434)
T ss_dssp HHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHH
Confidence 99999888888777888889999999999999999999999999998888887777766766666543
No 46
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.87 E-value=1.6e-07 Score=79.16 Aligned_cols=204 Identities=10% Similarity=-0.006 Sum_probs=135.8
Q ss_pred Hhhccc-CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 023037 22 ILEKGL-VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNI 100 (288)
Q Consensus 22 ~~ak~~-~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~i 100 (288)
..|... ..+++++|++.|++++...++. ..++..++.+|...|+++++++++++.+... +... .+...+
T Consensus 28 ~~a~~~~~~~~~~~A~~~~~~~l~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~-----~~~~~l 97 (243)
T 2q7f_A 28 QQMGRGSEFGDYEKAAEAFTKAIEENKED----AIPYINFANLLSSVNELERALAFYDKALELD-SSAA-----TAYYGA 97 (243)
T ss_dssp --------------CCTTHHHHHTTCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH-----HHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-Ccch-----HHHHHH
Confidence 334443 4678999999999999876543 4577889999999999999999999998876 4322 222222
Q ss_pred HHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccch
Q 023037 101 MDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQ 180 (288)
Q Consensus 101 ld~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~ 180 (288)
-..+.. . .+.+.....++ +.++...+ ...+...+|.+|...|++++|...++++.+..+ ++
T Consensus 98 a~~~~~-~-~~~~~A~~~~~---~~~~~~~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~------ 158 (243)
T 2q7f_A 98 GNVYVV-K-EMYKEAKDMFE---KALRAGME---NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE-----ND------ 158 (243)
T ss_dssp HHHHHH-T-TCHHHHHHHHH---HHHHHTCC---SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT-----TC------
T ss_pred HHHHHH-h-ccHHHHHHHHH---HHHHhCCC---CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----cc------
Confidence 222221 1 12333333333 33333222 235677899999999999999999999988832 22
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhH
Q 023037 181 LLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRR 260 (288)
Q Consensus 181 llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a 260 (288)
.+++..-+.+|...+++.+|...+.++...... +| .+...-|.++...|+++.|..+|-++.+... +++.+
T Consensus 159 -~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~--~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p--~~~~~ 229 (243)
T 2q7f_A 159 -TEARFQFGMCLANEGMLDEALSQFAAVTEQDPG--HA----DAFYNAGVTYAYKENREKALEMLDKAIDIQP--DHMLA 229 (243)
T ss_dssp -HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCTTHHHHHHHHHHHHCT--TCHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc--cH----HHHHHHHHHHHHccCHHHHHHHHHHHHccCc--chHHH
Confidence 257788899999999999999999999876432 23 3456678889999999999999999988542 34544
Q ss_pred HHH
Q 023037 261 IQC 263 (288)
Q Consensus 261 ~~~ 263 (288)
...
T Consensus 230 ~~~ 232 (243)
T 2q7f_A 230 LHA 232 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 47
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.87 E-value=9.8e-08 Score=78.59 Aligned_cols=159 Identities=11% Similarity=0.085 Sum_probs=129.4
Q ss_pred CCCCHHHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhc
Q 023037 28 VETDPEGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~ 105 (288)
..+++++|++.|++.+.... ....+...++..+|.+|...|+++++.+++.+.+... ...
T Consensus 38 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~----------------- 99 (203)
T 3gw4_A 38 FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELL-ASL----------------- 99 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHS-----------------
T ss_pred HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHc-----------------
Confidence 46899999999999998532 2344567899999999999999999999999998887 221
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHH
Q 023037 106 GSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVY 185 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~ 185 (288)
++ +......+..++|.++...|+++++...+++..+..+.. ++. .....++
T Consensus 100 --~~---------------------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~~~---~~~~~~~ 150 (203)
T 3gw4_A 100 --PE---------------------DPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA---DDQ---VAIACAF 150 (203)
T ss_dssp --CC---------------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT---TCH---HHHHHHH
T ss_pred --Cc---------------------cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc---cch---HHHHHHH
Confidence 11 011223456789999999999999999999998886554 344 5667788
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhh
Q 023037 186 AIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHM 233 (288)
Q Consensus 186 ~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~ 233 (288)
..-+.+|..+|++.+|...+.+|+.+.....+|...+.+....|.++-
T Consensus 151 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T 3gw4_A 151 RGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMTRLNGLEH 198 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcccchhh
Confidence 889999999999999999999999999999999999999888777654
No 48
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.86 E-value=5.6e-07 Score=78.85 Aligned_cols=205 Identities=13% Similarity=-0.003 Sum_probs=134.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh---------------h
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN---------------Y 92 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka---------------~ 92 (288)
..+++++|++.|++++...++. ..++..++.++...|+++++.+++++.+... +..... .
T Consensus 33 ~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~ 107 (327)
T 3cv0_A 33 KLANLAEAALAFEAVCQAAPER----EEAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAALAVSHTNEHNANA 107 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cCCHHHHHHHHHHHHHcCCHHH
Confidence 4578888999988888766532 3456678888888888888888888877654 321111 1
Q ss_pred HHHHHHHHHHHhccCCC--cc------------------hhhHHHHHHHHHHHHHHhhhh-hhhHHhhhhHHHHHhhhcc
Q 023037 93 SEKCINNIMDFVSGSAS--QN------------------FSLLREFYQTTLKALEEAKNE-RLWFKTNLKLCKIWFDMGE 151 (288)
Q Consensus 93 ~~k~i~~ild~~~~~~~--~~------------------~~~~~~~~~~~l~~i~~a~ne-r~~f~~~~kL~~lyl~~~~ 151 (288)
+.+.+..+++....... .. .-.....++.+.+.++.+-.. .....+...+|.+|...|+
T Consensus 108 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 187 (327)
T 3cv0_A 108 ALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNN 187 (327)
T ss_dssp HHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcc
Confidence 12222222221110000 00 001112223333333332211 1234677899999999999
Q ss_pred hhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchh
Q 023037 152 YGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKM 231 (288)
Q Consensus 152 y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l 231 (288)
+++|..+++++.+..+ ++ .+++..-+.+|...+++.+|...|.++...... +|. ....-|.+
T Consensus 188 ~~~A~~~~~~~~~~~~-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--~~~----~~~~l~~~ 249 (327)
T 3cv0_A 188 YDSAAANLRRAVELRP-----DD-------AQLWNKLGATLANGNRPQEALDAYNRALDINPG--YVR----VMYNMAVS 249 (327)
T ss_dssp HHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHH----HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-----Cc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--CHH----HHHHHHHH
Confidence 9999999999988832 22 267888899999999999999999999886432 122 34456888
Q ss_pred hhhhccHHHHHHHHHHHHhhhhhh
Q 023037 232 HMAERQWADAATDFFEAFKNYDEA 255 (288)
Q Consensus 232 ~~~ekdy~~A~syF~EaF~~y~e~ 255 (288)
+...|+|+.|..+|-++.+.....
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVGG 273 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHhccHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999877653
No 49
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.86 E-value=2e-07 Score=76.31 Aligned_cols=167 Identities=13% Similarity=0.034 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
...+.+||.+|..+|++++|+++|++.+..- |.-+.+. ..+-..+... + ..+...+.....+... .
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~-----~~la~~~~~~-~----~~~~a~~~~~~~~~~~---~ 70 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-PNNVETL-----LKLGKTYMDI-G----LPNDAIESLKKFVVLD---T 70 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHH-----HHHHHHHHHT-T----CHHHHHHHHHHHHHHC---C
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHH-----HHHHHHHHHC-C----CHHHHHHHHHHHHhcC---c
Confidence 4567899999999999999999999999886 6543322 2222212111 1 2222222222222222 2
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
........++.++...++++++...+.++.+..+ ++ .+++..-+.+|..+|++.+|...|.+++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~-----~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p 138 (184)
T 3vtx_A 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNT-----VY-------ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP 138 (184)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----cc-------hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc
Confidence 2335667889999999999999999999988832 22 26777789999999999999999999998743
Q ss_pred cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 214 AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 214 ~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
. - +.+...-|.+|...|+|+.|..+|-+|.+..
T Consensus 139 ~-----~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 139 G-----F-IRAYQSIGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp T-----C-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred h-----h-hhHHHHHHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 2 1 2345567899999999999999999998754
No 50
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.86 E-value=2.1e-07 Score=89.48 Aligned_cols=210 Identities=11% Similarity=0.019 Sum_probs=129.2
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++++...++. ..++..++.+|.+.|++++++++|++.+... +.- ......+...+...
T Consensus 386 ~g~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~-----~~~~~~l~~~~~~~- 454 (597)
T 2xpi_A 386 VNKISEARRYFSKSSTMDPQF----GPAWIGFAHSFAIEGEHDQAISAYTTAARLF-QGT-----HLPYLFLGMQHMQL- 454 (597)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-TTC-----SHHHHHHHHHHHHH-
T ss_pred hccHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccc-----hHHHHHHHHHHHHc-
Confidence 345555666665555543321 1234456666666666666666666655443 211 11222222222211
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
++.+.....++.. ++... ....+...++.+|...|++++|..++++..+..+..+ .+. ....+++..-
T Consensus 455 -g~~~~A~~~~~~~---~~~~~---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~p---~~~~~~~~~l 522 (597)
T 2xpi_A 455 -GNILLANEYLQSS---YALFQ---YDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQ--SNE---KPWAATWANL 522 (597)
T ss_dssp -TCHHHHHHHHHHH---HHHCC---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCS---GGGHHHHHHH
T ss_pred -CCHHHHHHHHHHH---HHhCC---CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccc--cch---hhHHHHHHHH
Confidence 1122222222222 22111 1235677899999999999999999999988754321 122 4457899999
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHH
Q 023037 189 IQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLV 268 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~ 268 (288)
+.+|...|++.+|...|.++...... +| .+...-|.+|...|+|+.|..+|-++++.. .+++.+ |..
T Consensus 523 ~~~~~~~g~~~~A~~~~~~~~~~~p~--~~----~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~--p~~~~~-----~~~ 589 (597)
T 2xpi_A 523 GHAYRKLKMYDAAIDALNQGLLLSTN--DA----NVHTAIALVYLHKKIPGLAITHLHESLAIS--PNEIMA-----SDL 589 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSSC--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHH-----HHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCC--Ch----HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCChHH-----HHH
Confidence 99999999999999999999887511 23 445666888999999999999999998853 233433 555
Q ss_pred HHHHhc
Q 023037 269 LANMLM 274 (288)
Q Consensus 269 L~~il~ 274 (288)
|+.++.
T Consensus 590 l~~~~~ 595 (597)
T 2xpi_A 590 LKRALE 595 (597)
T ss_dssp HHHTTC
T ss_pred HHHHHh
Confidence 666554
No 51
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.86 E-value=3.4e-07 Score=78.08 Aligned_cols=191 Identities=12% Similarity=0.058 Sum_probs=135.7
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++. ..++..++.+|...|+++++++++++.+... +... .....+...+...
T Consensus 49 ~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~-----~~~~~la~~~~~~ 118 (252)
T 2ho1_A 49 QRGNTEQAKVPLRKALEIDPSS----ADAHAALAVVFQTEMEPKLADEEYRKALASD-SRNA-----RVLNNYGGFLYEQ 118 (252)
T ss_dssp HTTCTGGGHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH-----HHHHHHHHHHHHT
T ss_pred HcCChHHHHHHHHHHHhcCCCh----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcH-----HHHHHHHHHHHHH
Confidence 4678999999999999876533 3577899999999999999999999998876 4322 2222222222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+.+.....++. .++ .........+...+|.+|...|++++|...++++.+..+ ++ .+++..
T Consensus 119 --g~~~~A~~~~~~---~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-----~~-------~~~~~~ 180 (252)
T 2ho1_A 119 --KRYEEAYQRLLE---ASQ-DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR-----NQ-------PSVALE 180 (252)
T ss_dssp --TCHHHHHHHHHH---HTT-CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----CC-------HHHHHH
T ss_pred --hHHHHHHHHHHH---HHh-CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-----cc-------HHHHHH
Confidence 122222223322 222 112334457788999999999999999999999988732 12 367788
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
-+.+|..++++.+|...+.++...... ++. .....|.++...++++.|..+|-++.+.+
T Consensus 181 la~~~~~~g~~~~A~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 181 MADLLYKEREYVPARQYYDLFAQGGGQ--NAR----SLLLGIRLAKVFEDRDTAASYGLQLKRLY 239 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSCC--CHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcC--cHH----HHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 899999999999999999998774331 122 34456777889999999999999988765
No 52
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.86 E-value=5.6e-07 Score=74.49 Aligned_cols=201 Identities=14% Similarity=0.060 Sum_probs=138.2
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++...++. ..++..++.+|...|+++++++++.+.+... +... .....+...+...
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~-----~~~~~l~~~~~~~ 89 (225)
T 2vq2_A 20 RGQDYRQATASIEDALKSDPKN----ELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PDSA-----EINNNYGWFLCGR 89 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH-----HHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHhCccc----hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCCh-----HHHHHHHHHHHHh
Confidence 4689999999999999876543 3467889999999999999999999998876 4322 2233333323222
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+ +.+.....++ +.++ .........+...+|.++...|++++|...++++.+..+ ++ .+++..
T Consensus 90 ~~-~~~~A~~~~~---~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~ 152 (225)
T 2vq2_A 90 LN-RPAESMAYFD---KALA-DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP-----QF-------PPAFKE 152 (225)
T ss_dssp TC-CHHHHHHHHH---HHHT-STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC-------HHHHHH
T ss_pred cC-cHHHHHHHHH---HHHc-CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------chHHHH
Confidence 02 2323333333 3333 212233346678899999999999999999999988722 12 366777
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHH
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQ 262 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~ 262 (288)
-+.+|...+++.+|...+.++..... -.+|.. ...++.++...++++.|..++-...+.+ .+++....
T Consensus 153 la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~--p~~~~~~~ 220 (225)
T 2vq2_A 153 LARTKMLAGQLGDADYYFKKYQSRVE-VLQADD----LLLGWKIAKALGNAQAAYEYEAQLQANF--PYSEELQT 220 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHC-SCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC-CCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHHHhC--CCCHHHHH
Confidence 88999999999999999999988653 012222 3466778889999999988877765543 34444433
No 53
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.84 E-value=1e-07 Score=74.37 Aligned_cols=122 Identities=9% Similarity=0.027 Sum_probs=109.0
Q ss_pred hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHh
Q 023037 131 NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 131 ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~ 210 (288)
+......+...+|.+|...|+|+++...+++..+..+.. .+. .....++..-+.+|..++++.+|...+.+|+.
T Consensus 4 d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~---~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 77 (164)
T 3ro3_A 4 SRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF---GDK---AAERIAYSNLGNAYIFLGEFETASEYYKKTLL 77 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh---CCc---hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445566888999999999999999999999998886553 343 66678999999999999999999999999999
Q ss_pred hhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCCh
Q 023037 211 IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQ 258 (288)
Q Consensus 211 ~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~ 258 (288)
+.....+|...+.+...-|.++...++|++|..+|-++.+.....+++
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 125 (164)
T 3ro3_A 78 LARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDR 125 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccch
Confidence 999998988889999999999999999999999999999999888875
No 54
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.82 E-value=5.6e-07 Score=77.21 Aligned_cols=198 Identities=14% Similarity=0.120 Sum_probs=130.8
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|+++++..+........++..+|.+|...|+++++++++++.+... +..+. +...+-..+...
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~-----~~~~la~~~~~~ 90 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPE-----VFNYLGIYLTQA 90 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHH-----HHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CCcHH-----HHHHHHHHHHHc
Confidence 457889999999999987543233357889999999999999999999999998876 54322 222222222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
++++.....++.++ +-.. ....+...+|.+|...|+|++|...++++.+..+. +. .. ..
T Consensus 91 --~~~~~A~~~~~~al---~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~-----~~---~~-----~~ 149 (275)
T 1xnf_A 91 --GNFDAAYEAFDSVL---ELDP---TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN-----DP---FR-----SL 149 (275)
T ss_dssp --TCHHHHHHHHHHHH---HHCT---TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----CH---HH-----HH
T ss_pred --cCHHHHHHHHHHHH---hcCc---cccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-----Ch---HH-----HH
Confidence 12333333333333 3222 22467789999999999999999999999988322 11 11 11
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhc---------------------------cCCC-hhH---HHHHHhhcchhhhhhc
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKS---------------------------AIPH-PRI---MGIIRECGGKMHMAER 236 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~---------------------------~I~~-p~i---~a~I~~~~G~l~~~ek 236 (288)
-..++...+++.+|...+.++..... .+.. |.. .+.+...-|.+|...|
T Consensus 150 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 229 (275)
T 1xnf_A 150 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLG 229 (275)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcC
Confidence 11233556788888888866654321 1222 322 2566677788999999
Q ss_pred cHHHHHHHHHHHHhhh
Q 023037 237 QWADAATDFFEAFKNY 252 (288)
Q Consensus 237 dy~~A~syF~EaF~~y 252 (288)
+|+.|..+|-++.+..
T Consensus 230 ~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 230 DLDSATALFKLAVANN 245 (275)
T ss_dssp CHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCC
Confidence 9999999999988753
No 55
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.81 E-value=7.3e-07 Score=82.42 Aligned_cols=195 Identities=9% Similarity=0.083 Sum_probs=140.1
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++++...++. ..++..++.+|.+.|+++++++++++.+... +... .+...+...+...
T Consensus 156 ~~~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~-----~~~~~l~~~~~~~- 224 (450)
T 2y4t_A 156 SGDYTAAIAFLDKILEVCVWD----AELRELRAECFIKEGEPRKAISDLKAASKLK-NDNT-----EAFYKISTLYYQL- 224 (450)
T ss_dssp HTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH-CSCH-----HHHHHHHHHHHHT-
T ss_pred cCCHHHHHHHHHHHHHhCCCC----hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCH-----HHHHHHHHHHHHc-
Confidence 578899999999999876542 3467889999999999999999999998876 4322 2333333323222
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhH---------HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccc
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWF---------KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGS 179 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f---------~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~ 179 (288)
.+.+.....++.+ ++...+..... ...+.++..+...|++++|..+++++.+..+ ++. .
T Consensus 225 -g~~~~A~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p-----~~~---~ 292 (450)
T 2y4t_A 225 -GDHELSLSEVREC---LKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEP-----SIA---E 292 (450)
T ss_dssp -TCHHHHHHHHHHH---HHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-----SSH---H
T ss_pred -CCHHHHHHHHHHH---HHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----cch---H
Confidence 1233333334333 33322222211 1235669999999999999999999988732 333 5
Q ss_pred hHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 180 QLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 180 ~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
...+++..-+.+|...|++.+|...|.++..+... +| .+...-|.++...|+|+.|..+|-++.+..
T Consensus 293 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~--~~----~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 359 (450)
T 2y4t_A 293 YTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD--NV----NALKDRAEAYLIEEMYDEAIQDYETAQEHN 359 (450)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc--cH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 66789999999999999999999999999877321 12 445566888999999999999999998853
No 56
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.80 E-value=2.7e-07 Score=87.20 Aligned_cols=193 Identities=9% Similarity=0.027 Sum_probs=124.6
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++ ..++..++.++...|+++++++++++.+... +..+. +...+-......
T Consensus 255 ~~~~~~~A~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~-----~~~~l~~~~~~~ 323 (537)
T 3fp2_A 255 LKNNLLDAQVLLQESINLHPT-----PNSYIFLALTLADKENSQEFFKFFQKAVDLN-PEYPP-----TYYHRGQMYFIL 323 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHCCC-----HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC-TTCHH-----HHHHHHHHHHHT
T ss_pred hcccHHHHHHHHHHHHhcCCC-----chHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCHH-----HHHHHHHHHHhc
Confidence 356888999999999987654 3677889999999999999999999998876 54322 222222222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+++.....++.++ +-.. ....+...+|.+|...|++++|...++++.+..+ ++. +++..
T Consensus 324 --~~~~~A~~~~~~a~---~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-----~~~-------~~~~~ 383 (537)
T 3fp2_A 324 --QDYKNAKEDFQKAQ---SLNP---ENVYPYIQLACLLYKQGKFTESEAFFNETKLKFP-----TLP-------EVPTF 383 (537)
T ss_dssp --TCHHHHHHHHHHHH---HHCT---TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TCT-------HHHHH
T ss_pred --CCHHHHHHHHHHHH---HhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCh-------HHHHH
Confidence 12333333333333 2221 1235667889999999999999999998888732 222 56666
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhh----------ccHHHHHHHHHHHHhh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAE----------RQWADAATDFFEAFKN 251 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~e----------kdy~~A~syF~EaF~~ 251 (288)
-+.+|...|++.+|...|.++...................-|.++... |+|+.|..+|-++.+.
T Consensus 384 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 457 (537)
T 3fp2_A 384 FAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACEL 457 (537)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHh
Confidence 688889999999999999999887754443211111112224444444 6666666666666554
No 57
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.79 E-value=3.9e-07 Score=78.44 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=133.8
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++.. .++..++.+|...|+++++++++++.+. . +. .......+...+-......
T Consensus 15 ~~~~~~~A~~~~~~~l~~~p~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~-~~-~~~~~~~~~~~lg~~~~~~ 87 (272)
T 3u4t_A 15 KNNNYAEAIEVFNKLEAKKYNSP----YIYNRRAVCYYELAKYDLAQKDIETYFS-K-VN-ATKAKSADFEYYGKILMKK 87 (272)
T ss_dssp TTTCHHHHHHHHHHHHHTTCCCS----TTHHHHHHHHHHTTCHHHHHHHHHHHHT-T-SC-TTTCCHHHHHHHHHHHHHT
T ss_pred HhcCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHHhhHHHHHHHHHHHHh-c-cC-chhHHHHHHHHHHHHHHHc
Confidence 56899999999999999876432 2577899999999999999999999988 3 31 1112233333322222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+.+.....++.+++ .. .....+...+|.+|...|+|++|...++++.+.. + ++ .+++..
T Consensus 88 --~~~~~A~~~~~~a~~---~~---~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--~---~~-------~~~~~~ 147 (272)
T 3u4t_A 88 --GQDSLAIQQYQAAVD---RD---TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT--T---TD-------PKVFYE 147 (272)
T ss_dssp --TCHHHHHHHHHHHHH---HS---TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSS--C---CC-------HHHHHH
T ss_pred --ccHHHHHHHHHHHHh---cC---cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcC--C---Cc-------HHHHHH
Confidence 123333344443333 22 2233577899999999999999999998887761 1 22 255666
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhcc---HHHHHHHHHHHHhhhhhhCCh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQ---WADAATDFFEAFKNYDEAGNQ 258 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekd---y~~A~syF~EaF~~y~e~g~~ 258 (288)
-+...+..+++.+|...|.++..+...- ......-|.++...++ |+.|..+|-++.+.....+++
T Consensus 148 l~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 215 (272)
T 3u4t_A 148 LGQAYYYNKEYVKADSSFVKVLELKPNI------YIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAK 215 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhccccc
Confidence 6633334459999999999998875432 1233345666776676 999999999999988766654
No 58
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.78 E-value=2.3e-07 Score=87.73 Aligned_cols=223 Identities=10% Similarity=0.091 Sum_probs=151.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++...++. ..++..+|.+|...|+++++.+++++.+... +..... ...+-..+...
T Consensus 288 ~~~~~~~A~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~-----~~~la~~~~~~ 357 (537)
T 3fp2_A 288 DKENSQEFFKFFQKAVDLNPEY----PPTYYHRGQMYFILQDYKNAKEDFQKAQSLN-PENVYP-----YIQLACLLYKQ 357 (537)
T ss_dssp CSSCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCSHH-----HHHHHHHHHHT
T ss_pred HhcCHHHHHHHHHHHhccCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-CCCHHH-----HHHHHHHHHHc
Confidence 4678899999999999876542 3467899999999999999999999999876 543322 22222222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+.+..... ..+.++...+ ...+...+|.+|...|++++|...++++.+..+..+ +. ...+-.+..
T Consensus 358 --g~~~~A~~~---~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~---~~---~~~~~~~~~ 423 (537)
T 3fp2_A 358 --GKFTESEAF---FNETKLKFPT---LPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQE---KI---HVGIGPLIG 423 (537)
T ss_dssp --TCHHHHHHH---HHHHHHHCTT---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCS---SC---SSTTHHHHH
T ss_pred --CCHHHHHHH---HHHHHHhCCC---ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcch---hh---HHHHHHHHH
Confidence 123233333 3333333222 234667889999999999999999999988854331 21 233444566
Q ss_pred HHHHHHhh----------cCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCC
Q 023037 188 EIQMYTET----------KNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGN 257 (288)
Q Consensus 188 E~~~y~~~----------~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~ 257 (288)
.+.+|... +++.+|...|.+++..... +| .+...-|.+|...|+|+.|..+|-++.+... .+
T Consensus 424 ~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~--~~----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--~~ 495 (537)
T 3fp2_A 424 KATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPR--SE----QAKIGLAQLKLQMEKIDEAIELFEDSAILAR--TM 495 (537)
T ss_dssp HHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----C
T ss_pred HHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCC--CH----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--Cc
Confidence 67788888 9999999999999887432 13 4557778999999999999999999998764 34
Q ss_pred hhHHHHhHHHHHHHHhcCCCCCCCC
Q 023037 258 QRRIQCLKYLVLANMLMESEVNPFD 282 (288)
Q Consensus 258 ~~a~~~LKY~~L~~il~~~~~dpF~ 282 (288)
+...+.+.+...+.+-.....||-.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (537)
T 3fp2_A 496 DEKLQATTFAEAAKIQKRLRADPII 520 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHhHHHHHHHHHhccccHHH
Confidence 5566666665555554433444433
No 59
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.77 E-value=7e-07 Score=85.81 Aligned_cols=199 Identities=10% Similarity=-0.023 Sum_probs=133.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccc-hhh-----------------------------HHHHHHHHHHHHHHcCCHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEK-AEW-----------------------------GFKALKQTVKLYYRLGKYKEMMDAY 77 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~-~~~-----------------------------~~kal~~l~~l~~~~g~~~~~l~~~ 77 (288)
..+++++|++.|++++..+++. .-| ...++..++.+|.+.|+++++.+++
T Consensus 317 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 396 (597)
T 2xpi_A 317 VRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYF 396 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3567888888888887654421 101 1335556777777777777777777
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHH
Q 023037 78 REMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSK 157 (288)
Q Consensus 78 ~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ 157 (288)
++.+... +.. ..+.+.+.+.+.... +. ++..+...+.++... ....+...++.+|...|++++|..
T Consensus 397 ~~~~~~~-~~~-----~~~~~~l~~~~~~~g--~~---~~A~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~A~~ 462 (597)
T 2xpi_A 397 SKSSTMD-PQF-----GPAWIGFAHSFAIEG--EH---DQAISAYTTAARLFQ---GTHLPYLFLGMQHMQLGNILLANE 462 (597)
T ss_dssp HHHHHHC-TTC-----HHHHHHHHHHHHHHT--CH---HHHHHHHHHHHHTTT---TCSHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHhC-CCC-----HHHHHHHHHHHHHcC--CH---HHHHHHHHHHHHhCc---cchHHHHHHHHHHHHcCCHHHHHH
Confidence 7776543 321 123333333332211 12 222222222222211 123456678999999999999999
Q ss_pred HHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-hhHHHHHHhhcchhhhhhc
Q 023037 158 ILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGIIRECGGKMHMAER 236 (288)
Q Consensus 158 ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p~i~a~I~~~~G~l~~~ek 236 (288)
+++++.+..+ ++. +++..-+.+|...|++.+|...|.++.......+. |...+.+..+-|.++...|
T Consensus 463 ~~~~~~~~~~-----~~~-------~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g 530 (597)
T 2xpi_A 463 YLQSSYALFQ-----YDP-------LLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLK 530 (597)
T ss_dssp HHHHHHHHCC-----CCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCC-----CCh-------HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhc
Confidence 9999988732 222 66788899999999999999999999988776665 7766778888899999999
Q ss_pred cHHHHHHHHHHHHhhh
Q 023037 237 QWADAATDFFEAFKNY 252 (288)
Q Consensus 237 dy~~A~syF~EaF~~y 252 (288)
+|+.|...|-++.+..
T Consensus 531 ~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLS 546 (597)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 60
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.77 E-value=2.7e-07 Score=86.41 Aligned_cols=124 Identities=13% Similarity=0.079 Sum_probs=97.2
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHhhhc
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE---TKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~---~~n~~kak~~y~~A~~~a~ 213 (288)
.+...+|.+|...|++++|...++++.+..+.. .+. .....++..-+.+|.. .|++.+|...|.++.....
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 446 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENKL---DGI---YVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDP 446 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS---SSC---SSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc---chH---HHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc
Confidence 566789999999999999999999998874432 111 2235688888999999 9999999999999988642
Q ss_pred cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhc
Q 023037 214 AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM 274 (288)
Q Consensus 214 ~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~ 274 (288)
.- | .+...-|.++...|+|+.|..+|-++.+... +++.+...+.|+-......
T Consensus 447 ~~--~----~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~--~~~~~~~~~~~~~~~~~~~ 499 (514)
T 2gw1_A 447 RS--E----QAKIGLAQMKLQQEDIDEAITLFEESADLAR--TMEEKLQAITFAEAAKVQQ 499 (514)
T ss_dssp TC--H----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--SHHHHHHHHHHHHHHHHHH
T ss_pred cc--H----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHH
Confidence 21 2 3445678889999999999999999998653 5678888888877766554
No 61
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.76 E-value=1.2e-06 Score=78.67 Aligned_cols=200 Identities=8% Similarity=0.007 Sum_probs=122.7
Q ss_pred CCCCHHHHHH-HHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh---------------
Q 023037 28 VETDPEGALA-GFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN--------------- 91 (288)
Q Consensus 28 ~~~d~~~Al~-~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka--------------- 91 (288)
.-+++++|++ .|.+.+...++.......++..+|.++...|++++++++|++.+... +.....
T Consensus 37 ~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~ 115 (368)
T 1fch_A 37 WLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQAENEQEL 115 (368)
T ss_dssp ---------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCcCHH
Confidence 3578899999 99999988764332224567899999999999999999999998764 322211
Q ss_pred hHHHHHHHHHHHhccCCCcchhhHHHHH------------HHHHHHHHHh----hhh-hhhH------------HhhhhH
Q 023037 92 YSEKCINNIMDFVSGSASQNFSLLREFY------------QTTLKALEEA----KNE-RLWF------------KTNLKL 142 (288)
Q Consensus 92 ~~~k~i~~ild~~~~~~~~~~~~~~~~~------------~~~l~~i~~a----~ne-r~~f------------~~~~kL 142 (288)
.+.+.+...+.. .|+ .....+ +.+.+.++.+ .+. ..+. .....+
T Consensus 116 ~A~~~~~~al~~---~~~----~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (368)
T 1fch_A 116 LAISALRRCLEL---KPD----NQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRIL 188 (368)
T ss_dssp HHHHHHHHHHHH---CTT----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTT
T ss_pred HHHHHHHHHHhc---CCC----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHH
Confidence 112222222221 121 111111 1111111111 100 0000 000146
Q ss_pred HHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHH
Q 023037 143 CKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMG 222 (288)
Q Consensus 143 ~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a 222 (288)
+.++ ..|++++|...++++.+..+.. ...+++..-+.+|...|++.+|...|.+++.+.... +
T Consensus 189 ~~~~-~~~~~~~A~~~~~~a~~~~p~~----------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------~ 251 (368)
T 1fch_A 189 GSLL-SDSLFLEVKELFLAAVRLDPTS----------IDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND------Y 251 (368)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHSTTS----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------H
T ss_pred HHHh-hcccHHHHHHHHHHHHHhCcCc----------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC------H
Confidence 6666 9999999999999998883321 134778888999999999999999999998873221 2
Q ss_pred HHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 223 IIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 223 ~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.+...-|.++...|+|+.|..+|-++.+..
T Consensus 252 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 252 LLWNKLGATLANGNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 345667889999999999999999998753
No 62
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.73 E-value=1.2e-06 Score=69.98 Aligned_cols=156 Identities=10% Similarity=0.028 Sum_probs=117.5
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++...++. ..++..++.++...|+++++.+++++.+... +.
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~-------------------- 74 (186)
T 3as5_A 20 KAGRYSQAVMLLEQVYDADAFD----VDVALHLGIAYVKTGAVDRGTELLERSLADA-PD-------------------- 74 (186)
T ss_dssp HHTCHHHHHHHHTTTCCTTSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT--------------------
T ss_pred HhcCHHHHHHHHHHHHHhCccC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CC--------------------
Confidence 3578889999998888776532 3567788889999999998888887776543 11
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
...+...+|.++...|+++++...++++.+..+ ++ .+++..
T Consensus 75 ---------------------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~ 115 (186)
T 3as5_A 75 ---------------------------NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP-----IN-------FNVRFR 115 (186)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----TC-------HHHHHH
T ss_pred ---------------------------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc-----Hh-------HHHHHH
Confidence 012345678889999999999999999888722 12 266777
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
-+.+|...+++.+|...+.++...... + ..+...-|.++...|+|+.|..+|-++.+...
T Consensus 116 ~a~~~~~~~~~~~A~~~~~~~~~~~~~--~----~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 175 (186)
T 3as5_A 116 LGVALDNLGRFDEAIDSFKIALGLRPN--E----GKVHRAIAFSYEQMGRHEEALPHFKKANELDE 175 (186)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHhcCcc--c----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 888999999999999999999876421 1 23445668888899999999999999887653
No 63
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.71 E-value=1.2e-06 Score=74.20 Aligned_cols=167 Identities=16% Similarity=0.100 Sum_probs=107.1
Q ss_pred CCCCHHHHHHHHHHhhcCCc-cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 28 VETDPEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~-e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
..+++++|++.|+++++.++ ... .++..+|.++...|+++++++++++.+..- +
T Consensus 19 ~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p-------------------- 73 (228)
T 4i17_A 19 NAKNYAVAFEKYSEYLKLTNNQDS----VTAYNCGVCADNIKKYKEAADYFDIAIKKN-Y-------------------- 73 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-C--------------------
T ss_pred HccCHHHHHHHHHHHHhccCCCCc----HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-c--------------------
Confidence 45566666666666666553 211 344456666666666666666665554222 1
Q ss_pred CCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHH
Q 023037 107 SASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYA 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~ 186 (288)
....+...+|.+|...|+|++|...++++.+..+. +..--..+.+++.
T Consensus 74 ---------------------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~ 121 (228)
T 4i17_A 74 ---------------------------NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG-----NATIEKLYAIYYL 121 (228)
T ss_dssp ---------------------------SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----CHHHHHHHHHHHH
T ss_pred ---------------------------chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-----cHHHHHHHHHHHH
Confidence 12345667999999999999999999999998332 2211134678999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHhhhcc--CCC-hhHHHHHHhhcchh--------------------hhhhccHHHHHH
Q 023037 187 IEIQMYTETKNNKKLKQLYQKALAIKSA--IPH-PRIMGIIRECGGKM--------------------HMAERQWADAAT 243 (288)
Q Consensus 187 lE~~~y~~~~n~~kak~~y~~A~~~a~~--I~~-p~i~a~I~~~~G~l--------------------~~~ekdy~~A~s 243 (288)
.-+.+|..++++.+|...|.+|+.+... -+. -...|.+...-|.. ....++|++|..
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~ 201 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVD 201 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887433 222 23344444444443 112234477777
Q ss_pred HHHHHHhh
Q 023037 244 DFFEAFKN 251 (288)
Q Consensus 244 yF~EaF~~ 251 (288)
+|-.+.+.
T Consensus 202 ~~~~a~~l 209 (228)
T 4i17_A 202 YLGEAVTL 209 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 77777664
No 64
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.71 E-value=7.6e-06 Score=69.03 Aligned_cols=185 Identities=9% Similarity=0.093 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|.++...|+++++++++++.+... .. ......+-..+... .+.+.....++.+++.-......
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~------~~~~~~~~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~ 74 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KD------ITYLNNRAAAEYEK--GEYETAISTLNDAVEQGREMRAD 74 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CC------THHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-cc------HHHHHHHHHHHHHc--ccHHHHHHHHHHHHHhCcccccc
Confidence 45788999999999999999999999998765 22 12222222222211 23444455555555443322212
Q ss_pred -hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCC------c------c--ccccchHHHHHHHHHHHHHhhcC
Q 023037 133 -RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGT------D------D--QKKGSQLLEVYAIEIQMYTETKN 197 (288)
Q Consensus 133 -r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~------d------D--k~~~~~llEv~~lE~~~y~~~~n 197 (288)
.....+...+|.+|...|++++|...+++..+..+..+.- + + ........+++..-+.+|...++
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSD 154 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcC
Confidence 2225888999999999999999999999998863220000 0 0 00113446888899999999999
Q ss_pred HHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 198 NKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+.+|...|.++...... +| .+...-|.++...|+|+.|..+|-++.+..
T Consensus 155 ~~~A~~~~~~a~~~~~~--~~----~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPE--DA----RGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCcc--cH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999999999886532 12 455667889999999999999999998754
No 65
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.69 E-value=6.3e-07 Score=83.81 Aligned_cols=194 Identities=11% Similarity=0.093 Sum_probs=142.6
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++...++ ..++..++.+|...|+++++++++++.+... +..+. +...+-......
T Consensus 249 ~~~~~~~A~~~~~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~-----~~~~l~~~~~~~ 317 (514)
T 2gw1_A 249 LKNDPLGAHEDIKKAIELFPR-----VNSYIYMALIMADRNDSTEYYNYFDKALKLD-SNNSS-----VYYHRGQMNFIL 317 (514)
T ss_dssp HSSCHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTC-TTCTH-----HHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHhhCcc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcC-cCCHH-----HHHHHHHHHHHh
Confidence 467899999999999987654 5788899999999999999999999998765 43222 222222222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+.+.....++.+++ ...+ ...+...+|.+|...|+++++..+++++.+..+ ++. +++..
T Consensus 318 --~~~~~A~~~~~~~~~---~~~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~~-------~~~~~ 377 (514)
T 2gw1_A 318 --QNYDQAGKDFDKAKE---LDPE---NIFPYIQLACLAYRENKFDDCETLFSEAKRKFP-----EAP-------EVPNF 377 (514)
T ss_dssp --TCTTHHHHHHHHHHH---TCSS---CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHST-----TCS-------HHHHH
T ss_pred --CCHHHHHHHHHHHHH---hChh---hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcc-----cCH-------HHHHH
Confidence 123344444444333 1211 235778899999999999999999999988732 222 56777
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhh---hccHHHHHHHHHHHHhhh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMA---ERQWADAATDFFEAFKNY 252 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~---ekdy~~A~syF~EaF~~y 252 (288)
-+.+|...|++.+|...|.++......-+.....+.....-|.++.. .|+|+.|..+|-++.+..
T Consensus 378 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~ 445 (514)
T 2gw1_A 378 FAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD 445 (514)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC
Confidence 89999999999999999999998877655533334455667888998 999999999999998753
No 66
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.67 E-value=5.3e-06 Score=72.16 Aligned_cols=179 Identities=17% Similarity=0.173 Sum_probs=124.2
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYR----LGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 104 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~----~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~ 104 (288)
.+++++|++.|++.++.+. ..++..+|.+|.. .|++++++++|++.+..- . ..+..++-..+
T Consensus 19 ~~~~~~A~~~~~~a~~~~~------~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~-------~~a~~~lg~~~ 84 (273)
T 1ouv_A 19 EKDFTQAKKYFEKACDLKE------NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-Y-------SNGCHLLGNLY 84 (273)
T ss_dssp TTCHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-C-------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCC------HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-C-------HHHHHHHHHHH
Confidence 4699999999999998321 2578899999999 999999999999987653 1 12222221112
Q ss_pred cc--CCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCcccccc
Q 023037 105 SG--SASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQKKG 178 (288)
Q Consensus 105 ~~--~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk~~~ 178 (288)
.. ....+.+.....++.+.+. .......+|+.+|.. .++++++...+++..+. ++.
T Consensus 85 ~~g~~~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~~--- 146 (273)
T 1ouv_A 85 YSGQGVSQNTNKALQYYSKACDL--------KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL-------NDG--- 146 (273)
T ss_dssp HHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------TCH---
T ss_pred hCCCCcccCHHHHHHHHHHHHHc--------CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc-------CcH---
Confidence 11 0012333444444444331 134677889999999 99999999999988876 433
Q ss_pred chHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhh----hccHHHHHHHHHHHHh
Q 023037 179 SQLLEVYAIEIQMYTE----TKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMA----ERQWADAATDFFEAFK 250 (288)
Q Consensus 179 ~~llEv~~lE~~~y~~----~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~----ekdy~~A~syF~EaF~ 250 (288)
+.+..-+.+|.. .+++.+|...|.+|.... +|. ....-|.+|.. .+|++.|..+|-.|.+
T Consensus 147 ----~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~----~~~----a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 214 (273)
T 1ouv_A 147 ----DGCTILGSLYDAGRGTPKDLKKALASYDKACDLK----DSP----GCFNAGNMYHHGEGATKNFKEALARYSKACE 214 (273)
T ss_dssp ----HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHH----HHHHHHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC----CHH----HHHHHHHHHHcCCCCCccHHHHHHHHHHHHh
Confidence 455666777877 889999999999988663 332 23345777777 8999999999988876
Q ss_pred h
Q 023037 251 N 251 (288)
Q Consensus 251 ~ 251 (288)
.
T Consensus 215 ~ 215 (273)
T 1ouv_A 215 L 215 (273)
T ss_dssp T
T ss_pred C
Confidence 4
No 67
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.67 E-value=4.1e-06 Score=72.89 Aligned_cols=187 Identities=14% Similarity=0.090 Sum_probs=134.7
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYR----LGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 104 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~----~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~ 104 (288)
.+|+++|++.|++.++.+ ...++..+|.+|.. .|++++++++|++.+..- . ..+..++=..+
T Consensus 55 ~~~~~~A~~~~~~a~~~~------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~-------~~a~~~lg~~~ 120 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK-Y-------AEGCASLGGIY 120 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-C-------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCC------CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-C-------ccHHHHHHHHH
Confidence 688999999999998764 24678899999999 999999999999987652 1 22233322222
Q ss_pred ccC--CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCcccccc
Q 023037 105 SGS--ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQKKG 178 (288)
Q Consensus 105 ~~~--~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk~~~ 178 (288)
... ...+.+.....++.+.+. .......+++.+|.. .+++++|...+++..+. ++.
T Consensus 121 ~~~~~~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~~--- 182 (273)
T 1ouv_A 121 HDGKVVTRDFKKAVEYFTKACDL--------NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-------KDS--- 182 (273)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TCH---
T ss_pred HcCCCcccCHHHHHHHHHHHHhc--------CcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CCH---
Confidence 220 012343444444444331 134567899999999 99999999999988776 332
Q ss_pred chHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhh----hccHHHHHHHHHHHHh
Q 023037 179 SQLLEVYAIEIQMYTE----TKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMA----ERQWADAATDFFEAFK 250 (288)
Q Consensus 179 ~~llEv~~lE~~~y~~----~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~----ekdy~~A~syF~EaF~ 250 (288)
+.+..-+.+|.. .+|+.+|...|.+|..... | .....-|.+|.. .+|+++|..+|-.|.+
T Consensus 183 ----~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~----~----~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~ 250 (273)
T 1ouv_A 183 ----PGCFNAGNMYHHGEGATKNFKEALARYSKACELEN----G----GGCFNLGAMQYNGEGVTRNEKQAIENFKKGCK 250 (273)
T ss_dssp ----HHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC----H----HHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC----H----HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHH
Confidence 667777889999 9999999999999987632 2 233455777887 9999999999999865
Q ss_pred hhhhhCChhHHHH
Q 023037 251 NYDEAGNQRRIQC 263 (288)
Q Consensus 251 ~y~e~g~~~a~~~ 263 (288)
.|++.+...
T Consensus 251 ----~~~~~a~~~ 259 (273)
T 1ouv_A 251 ----LGAKGACDI 259 (273)
T ss_dssp ----HTCHHHHHH
T ss_pred ----cCCHHHHHH
Confidence 466665444
No 68
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.66 E-value=9.4e-07 Score=80.68 Aligned_cols=193 Identities=13% Similarity=0.160 Sum_probs=100.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++. ..++..++.++...|++++++++|++.+..- +....... ++-......
T Consensus 147 ~~g~~~~A~~~~~~al~~~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~-----~lg~~~~~~ 216 (388)
T 1w3b_A 147 ALGRLEEAKACYLKAIETQPNF----AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD-PNFLDAYI-----NLGNVLKEA 216 (388)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHH-----HHHHHHHTT
T ss_pred HccCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCcHHHHH-----HHHHHHHHc
Confidence 3578889999998888776532 3456778888888888888888888887764 43322211 111111110
Q ss_pred CCcchhhHHHHHH---------------------------HHHHHHHHhhh-hhhhHHhhhhHHHHHhhhcchhHHHHHH
Q 023037 108 ASQNFSLLREFYQ---------------------------TTLKALEEAKN-ERLWFKTNLKLCKIWFDMGEYGRMSKIL 159 (288)
Q Consensus 108 ~~~~~~~~~~~~~---------------------------~~l~~i~~a~n-er~~f~~~~kL~~lyl~~~~y~~~~~ll 159 (288)
.+.+.....+. .+.+.++.+-. ......+...++.+|...|++++|..++
T Consensus 217 --~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 294 (388)
T 1w3b_A 217 --RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCY 294 (388)
T ss_dssp --TCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 00111111111 11111111110 0111234455666666666666666666
Q ss_pred HHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHH
Q 023037 160 KELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWA 239 (288)
Q Consensus 160 ~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~ 239 (288)
++..+..+ ++ .+++..-+.+|...+++.+|...|.+++... |.. +.....-|.++...|+|+
T Consensus 295 ~~al~~~p-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-----p~~-~~~~~~l~~~~~~~g~~~ 356 (388)
T 1w3b_A 295 NTALRLCP-----TH-------ADSLNNLANIKREQGNIEEAVRLYRKALEVF-----PEF-AAAHSNLASVLQQQGKLQ 356 (388)
T ss_dssp HHHHHHCT-----TC-------HHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC-----TTC-HHHHHHHHHHHHTTTCCH
T ss_pred HHHHhhCc-----cc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCc-HHHHHHHHHHHHHcCCHH
Confidence 66655521 11 1344455566666666666666666665432 211 122333355566666666
Q ss_pred HHHHHHHHHHh
Q 023037 240 DAATDFFEAFK 250 (288)
Q Consensus 240 ~A~syF~EaF~ 250 (288)
.|..+|-++.+
T Consensus 357 ~A~~~~~~a~~ 367 (388)
T 1w3b_A 357 EALMHYKEAIR 367 (388)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 66666666655
No 69
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.64 E-value=3e-06 Score=77.30 Aligned_cols=198 Identities=13% Similarity=0.144 Sum_probs=122.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhH------------HH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYS------------EK 95 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~------------~k 95 (288)
..+++++|++.|++++..+|+.. .+...++.++...|+++++.++|++.+..- +....... ++
T Consensus 113 ~~g~~~~A~~~~~~al~~~p~~~----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~ 187 (388)
T 1w3b_A 113 AAGDMEGAVQAYVSALQYNPDLY----CVRSDLGNLLKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWL 187 (388)
T ss_dssp HHSCSSHHHHHHHHHHHHCTTCT----HHHHHHHHHHHTTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHH
Confidence 35788999999999998876532 355689999999999999999999988764 43222111 11
Q ss_pred HHHHHHHHhccCCCcchhhHHHHHHH------------HHHHHHHhh-hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHH
Q 023037 96 CINNIMDFVSGSASQNFSLLREFYQT------------TLKALEEAK-NERLWFKTNLKLCKIWFDMGEYGRMSKILKEL 162 (288)
Q Consensus 96 ~i~~ild~~~~~~~~~~~~~~~~~~~------------~l~~i~~a~-ner~~f~~~~kL~~lyl~~~~y~~~~~ll~el 162 (288)
++...-..+...|+ ....++.+ +...++.+- -......+...++.+|...|++++|...++++
T Consensus 188 A~~~~~~al~~~p~----~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 263 (388)
T 1w3b_A 188 AIHHFEKAVTLDPN----FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRA 263 (388)
T ss_dssp HHHHHHHHHHHCTT----CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 11111111111111 11111111 111111110 00111245567788888888888888888877
Q ss_pred HHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHH
Q 023037 163 HKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAA 242 (288)
Q Consensus 163 kk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~ 242 (288)
.+.-+ ++ .+++..-+.+|...|++.+|...|.+++..... +|. ....-|.++...|+|+.|.
T Consensus 264 l~~~p-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~--~~~----~~~~l~~~~~~~g~~~~A~ 325 (388)
T 1w3b_A 264 IELQP-----HF-------PDAYCNLANALKEKGSVAEAEDCYNTALRLCPT--HAD----SLNNLANIKREQGNIEEAV 325 (388)
T ss_dssp HHTCS-----SC-------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT--CHH----HHHHHHHHHHTTTCHHHHH
T ss_pred HhhCC-----CC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc--cHH----HHHHHHHHHHHcCCHHHHH
Confidence 76621 12 256677788888888888888888888876321 122 2334577788888999998
Q ss_pred HHHHHHHhhh
Q 023037 243 TDFFEAFKNY 252 (288)
Q Consensus 243 syF~EaF~~y 252 (288)
..|-++.+..
T Consensus 326 ~~~~~al~~~ 335 (388)
T 1w3b_A 326 RLYRKALEVF 335 (388)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHhcC
Confidence 8888887643
No 70
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.59 E-value=1e-06 Score=77.26 Aligned_cols=168 Identities=7% Similarity=-0.051 Sum_probs=118.3
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhH
Q 023037 63 LYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKL 142 (288)
Q Consensus 63 l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL 142 (288)
++...|+++++.+++++.+... +... .+...+-..+... .+.+.....++.+ ++... ....+...+
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~~-~~~~-----~~~~~la~~~~~~--~~~~~A~~~~~~~---~~~~~---~~~~~~~~l 212 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEMN-PNDA-----QLHASLGVLYNLS--NNYDSAAANLRRA---VELRP---DDAQLWNKL 212 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHS-TTCH-----HHHHHHHHHHHHT--TCHHHHHHHHHHH---HHHCT---TCHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhC-CCCH-----HHHHHHHHHHHHh--ccHHHHHHHHHHH---HHhCC---CcHHHHHHH
Confidence 5888899999999999988776 4321 2233322222221 1232333333333 33222 223567899
Q ss_pred HHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhH--
Q 023037 143 CKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRI-- 220 (288)
Q Consensus 143 ~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i-- 220 (288)
|.+|...|++++|...++++.+..+ ++ .+++..-+.+|..+|++.+|...|.++.........|.-
T Consensus 213 ~~~~~~~~~~~~A~~~~~~a~~~~~-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 280 (327)
T 3cv0_A 213 GATLANGNRPQEALDAYNRALDINP-----GY-------VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEA 280 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCC-----CC-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccc
Confidence 9999999999999999999988732 22 256778899999999999999999999998766444332
Q ss_pred ----HHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhC
Q 023037 221 ----MGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAG 256 (288)
Q Consensus 221 ----~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g 256 (288)
...+...-|.++...|+++.|...|-++.+.+.+.-
T Consensus 281 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~ 320 (327)
T 3cv0_A 281 SREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEF 320 (327)
T ss_dssp CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchhh
Confidence 567777889999999999999999988888776543
No 71
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.58 E-value=3.4e-06 Score=71.41 Aligned_cols=142 Identities=10% Similarity=0.052 Sum_probs=96.5
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++ ...++..+|.+|..+|+++++++++++.+... +.-+. ..
T Consensus 54 ~~~~~~~A~~~~~~al~~~p~----~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~-----~~---------- 113 (228)
T 4i17_A 54 NIKKYKEAADYFDIAIKKNYN----LANAYIGKSAAYRDMKNNQEYIATLTEGIKAV-PGNAT-----IE---------- 113 (228)
T ss_dssp HTTCHHHHHHHHHHHHHTTCS----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHH-----HH----------
T ss_pred HhhcHHHHHHHHHHHHHhCcc----hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHH-----HH----------
Confidence 468899999999999988764 34678899999999999999999999998776 43110 00
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.....+..++|.++...|+|++|...++++.+. +.. ....+++..
T Consensus 114 -------------------------~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-------~p~---~~~~~~~~~ 158 (228)
T 4i17_A 114 -------------------------KLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV-------TSK---KWKTDALYS 158 (228)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-------SCH---HHHHHHHHH
T ss_pred -------------------------HHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc-------CCC---cccHHHHHH
Confidence 111124566777888888888888887777666 211 112344445
Q ss_pred HHHHHHhhcCH---------------------------HHHHHHHHHHHhhhccCCC-hhHHHHH
Q 023037 188 EIQMYTETKNN---------------------------KKLKQLYQKALAIKSAIPH-PRIMGII 224 (288)
Q Consensus 188 E~~~y~~~~n~---------------------------~kak~~y~~A~~~a~~I~~-p~i~a~I 224 (288)
-+.+|...++. .+|...|.+|+.+...-+. -.+++.|
T Consensus 159 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i 223 (228)
T 4i17_A 159 LGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQV 223 (228)
T ss_dssp HHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 55555555444 8899999999887654333 3444444
No 72
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.55 E-value=1.6e-05 Score=67.96 Aligned_cols=181 Identities=8% Similarity=0.058 Sum_probs=115.1
Q ss_pred HHHhhccc-CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhh---hhHHH
Q 023037 20 CSILEKGL-VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTR---NYSEK 95 (288)
Q Consensus 20 ~y~~ak~~-~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~k---a~~~k 95 (288)
.|..|... ..+++++|++.|++++...++ ..+...++..+|.+|.++|+++++++.|++++... |.-+. +..-.
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-P~~~~~~~a~~~~ 84 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN-PTHPNIDYVMYMR 84 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC-cCCCcHHHHHHHH
Confidence 34444443 468999999999999987653 33456899999999999999999999999999876 54322 11111
Q ss_pred H--HHHH----HHHhccCCC--cchhhHHHHHHHHHHHHHHhhhhh-h-------------hHHhhhhHHHHHhhhcchh
Q 023037 96 C--INNI----MDFVSGSAS--QNFSLLREFYQTTLKALEEAKNER-L-------------WFKTNLKLCKIWFDMGEYG 153 (288)
Q Consensus 96 ~--i~~i----ld~~~~~~~--~~~~~~~~~~~~~l~~i~~a~ner-~-------------~f~~~~kL~~lyl~~~~y~ 153 (288)
. ...+ ++.+..+.. .+....++.+....+.++...+.. . .......+|.+|+..|+|.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~ 164 (225)
T 2yhc_A 85 GLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWV 164 (225)
T ss_dssp HHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 1 0000 000000000 001122222222223332211111 1 1123467899999999999
Q ss_pred HHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 154 RMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 154 ~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
+|...++++.+..+.. ...-+++..-+.+|..+|++.+|...+..+...
T Consensus 165 ~A~~~~~~~l~~~p~~---------~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~ 213 (225)
T 2yhc_A 165 AVVNRVEGMLRDYPDT---------QATRDALPLMENAYRQMQMNAQAEKVAKIIAAN 213 (225)
T ss_dssp HHHHHHHHHHHHSTTS---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCcCC---------CccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhh
Confidence 9999999998884321 445688999999999999999999999877644
No 73
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.52 E-value=1.1e-05 Score=66.63 Aligned_cols=170 Identities=9% Similarity=-0.066 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|.++...|+++++++++++.+... +.... +...+-..+... .+.+.....++.++ +...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~-----~~~~l~~~~~~~--~~~~~A~~~~~~a~---~~~~-- 73 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSD-PKNEL-----AWLVRAEIYQYL--KVNDKAQESFRQAL---SIKP-- 73 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH-----HHHHHHHHHHHT--TCHHHHHHHHHHHH---HHCT--
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-ccchH-----HHHHHHHHHHHc--CChHHHHHHHHHHH---HhCC--
Confidence 35678899999999999999999999998876 44322 222222222211 12333333343333 3222
Q ss_pred hhhHHhhhhHHHHHhhh-cchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 133 RLWFKTNLKLCKIWFDM-GEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~-~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
....+...+|.+|... |+++++...++++.+. + .+ ....+++..-+.+|...+++.+|...+.++...
T Consensus 74 -~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~---~---~~----~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 74 -DSAEINNNYGWFLCGRLNRPAESMAYFDKALAD---P---TY----PTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA 142 (225)
T ss_dssp -TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTS---T---TC----SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcC---c---CC----cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1234668899999999 9999999999998871 1 11 223477888899999999999999999999876
Q ss_pred hccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 212 KSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 212 a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
... +| .....-|.++...++|+.|..+|-++.+..
T Consensus 143 ~~~--~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 143 QPQ--FP----PAFKELARTKMLAGQLGDADYYFKKYQSRV 177 (225)
T ss_dssp STT--CH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCC--Cc----hHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 432 12 334556888999999999999999998754
No 74
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.49 E-value=1.5e-05 Score=67.67 Aligned_cols=170 Identities=12% Similarity=0.058 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|.++...|+++++++++++.+... +... .+...+-..+... .+.+.....++.++ +...
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~-----~~~~~la~~~~~~--~~~~~A~~~~~~a~---~~~~-- 102 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEID-PSSA-----DAHAALAVVFQTE--MEPKLADEEYRKAL---ASDS-- 102 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC-TTCH-----HHHHHHHHHHHHT--TCHHHHHHHHHHHH---HHCT--
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcC-CChH-----HHHHHHHHHHHHc--CCHHHHHHHHHHHH---HHCc--
Confidence 46889999999999999999999999998875 4322 2222222222211 22333333343333 3222
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
....+...++.+|...|++++|..+++++.+. + .. ....+++..-+.+|...+++.+|...|.++....
T Consensus 103 -~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~---~----~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 171 (252)
T 2ho1_A 103 -RNARVLNNYGGFLYEQKRYEEAYQRLLEASQD---T----LY---PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN 171 (252)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTC---T----TC---TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhC---c----cC---cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 23467788999999999999999999988761 1 11 2235778888999999999999999999998875
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.. + ..+...-|.++...++|+.|..+|-++.+..
T Consensus 172 ~~--~----~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 205 (252)
T 2ho1_A 172 RN--Q----PSVALEMADLLYKEREYVPARQYYDLFAQGG 205 (252)
T ss_dssp SC--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS
T ss_pred cc--c----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 32 1 2344667888999999999999999988743
No 75
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.49 E-value=1.5e-05 Score=68.02 Aligned_cols=168 Identities=7% Similarity=0.021 Sum_probs=117.3
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhh
Q 023037 52 WGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN 131 (288)
Q Consensus 52 ~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~n 131 (288)
|...++.++|..+.+.|+++++++.|++++... |.- +
T Consensus 2 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~-------------------~----------------------- 38 (225)
T 2yhc_A 2 NPPNEIYATAQQKLQDGNWRQAITQLEALDNRY-PFG-------------------P----------------------- 38 (225)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTS-------------------T-----------------------
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCC-------------------h-----------------------
Confidence 445788999999999999999999999887654 320 0
Q ss_pred hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHh-----------------
Q 023037 132 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE----------------- 194 (288)
Q Consensus 132 er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~----------------- 194 (288)
..-.....+|.+|+..|+|++|...++++.+.-+.. ....+.+..-+.+|..
T Consensus 39 --~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~---------~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 107 (225)
T 2yhc_A 39 --YSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH---------PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDR 107 (225)
T ss_dssp --THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------TTHHHHHHHHHHHHHHHHC--------------
T ss_pred --HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC---------CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhc
Confidence 011345678999999999999999999998884321 2233445555555543
Q ss_pred -hcCHHHHHHHHHHHHhhhcc-CCChhHHHH----------HHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHH
Q 023037 195 -TKNNKKLKQLYQKALAIKSA-IPHPRIMGI----------IRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQ 262 (288)
Q Consensus 195 -~~n~~kak~~y~~A~~~a~~-I~~p~i~a~----------I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~ 262 (288)
.+++.+|...|.++...-.. ...+..... ....-|.+++..|+|..|...|-++.+.|- ++|....
T Consensus 108 ~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p--~~~~~~~ 185 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYP--DTQATRD 185 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST--TSHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCc--CCCccHH
Confidence 67899999999998876432 222333222 224568899999999999999999999874 3455555
Q ss_pred HhHHHHHHHHhcC
Q 023037 263 CLKYLVLANMLME 275 (288)
Q Consensus 263 ~LKY~~L~~il~~ 275 (288)
++-++..|..-.+
T Consensus 186 a~~~l~~~~~~~g 198 (225)
T 2yhc_A 186 ALPLMENAYRQMQ 198 (225)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 6666655554443
No 76
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.49 E-value=4e-06 Score=65.85 Aligned_cols=118 Identities=8% Similarity=0.141 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...+.++||..++++|++++|+++|++.+.+- |. .
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~--------------------------~------------------ 41 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELD-PS--------------------------N------------------ 41 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT--------------------------C------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC--------------------------C------------------
Confidence 46788999999999999999999999887654 21 0
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+..++|.+|+..|+|++|...+++..++.+..+ .+. ..+..+|..-+.+|..++++.+|...|.+|+...
T Consensus 42 ---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~---~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 42 ---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR--ADY---KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred ---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc--hhh---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 12356789999999999999999999988844321 222 4567889999999999999999999999998753
Q ss_pred ccCCChhHHHHHHh
Q 023037 213 SAIPHPRIMGIIRE 226 (288)
Q Consensus 213 ~~I~~p~i~a~I~~ 226 (288)
+.|.+...+.+
T Consensus 114 ---~~~~~~~~l~~ 124 (127)
T 4gcn_A 114 ---RDPELVKKVKE 124 (127)
T ss_dssp ---CCHHHHHHHHH
T ss_pred ---cCHHHHHHHHH
Confidence 34766655544
No 77
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.48 E-value=1.2e-05 Score=68.48 Aligned_cols=180 Identities=13% Similarity=0.127 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhh
Q 023037 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERL 134 (288)
Q Consensus 55 kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~ 134 (288)
.++..+|.++.+.|++++++..|++.+..- |.-+.+....+.- +.. . ++.+.....++.+++ -. -.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~-----~~~-~-g~~~~A~~~~~~al~---~~---P~ 71 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKEN-PQDPEALYWLART-----QLK-L-GLVNPALENGKTLVA---RT---PR 71 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHHHHH-----HHH-T-TCHHHHHHHHHHHHH---HC---TT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHH-----HHH-c-CCHHHHHHHHHHHHH---hC---CC
Confidence 467889999999999999999999998776 5543333222211 111 1 123333334443333 22 22
Q ss_pred hHHhhhhHHHHHhhh-----------cchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHH
Q 023037 135 WFKTNLKLCKIWFDM-----------GEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQ 203 (288)
Q Consensus 135 ~f~~~~kL~~lyl~~-----------~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~ 203 (288)
.......+|.+|... |++++|...++++.+.-+ ++ .+++..-+.+|..+|++.+|..
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P-----~~-------~~~~~~lg~~~~~~g~~~~A~~ 139 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNP-----RY-------APLHLQRGLVYALLGERDKAEA 139 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCc-----cc-------HHHHHHHHHHHHHcCChHHHHH
Confidence 345677899999999 999999999999998822 22 2778889999999999999999
Q ss_pred HHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhc
Q 023037 204 LYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM 274 (288)
Q Consensus 204 ~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~ 274 (288)
.|.+|+.+. .+|.+ ...-|.++...|+|+.|...|-.+.+.. .+++.. |..|+.++.
T Consensus 140 ~~~~al~~~---~~~~~----~~~la~~~~~~g~~~~A~~~~~~al~~~--P~~~~~-----~~~la~~~~ 196 (217)
T 2pl2_A 140 SLKQALALE---DTPEI----RSALAELYLSMGRLDEALAQYAKALEQA--PKDLDL-----RVRYASALL 196 (217)
T ss_dssp HHHHHHHHC---CCHHH----HHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTCHHH-----HHHHHHHHT
T ss_pred HHHHHHhcc---cchHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCChHH-----HHHHHHHHH
Confidence 999999987 45543 3566889999999999999999998753 233433 445555554
No 78
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.47 E-value=1.8e-06 Score=84.43 Aligned_cols=141 Identities=11% Similarity=0.042 Sum_probs=115.8
Q ss_pred CCCCHHHHHHHHHHhhcCCc----cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEP----EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDF 103 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~----e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~ 103 (288)
..+++++|+..|+++++... +.--+...++.+|+.+|..+|+|++|..++++.+...+..
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~---------------- 384 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL---------------- 384 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----------------
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH----------------
Confidence 46899999999999998633 2223479999999999999999999999999999887332
Q ss_pred hccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHH
Q 023037 104 VSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLE 183 (288)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llE 183 (288)
++. +.--+.....+||.+|..+|+|++|..++++...+....=|.|. ....+
T Consensus 385 lG~------------------------~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H----p~~~~ 436 (490)
T 3n71_A 385 YHH------------------------NNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSH----PITKD 436 (490)
T ss_dssp SCT------------------------TCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS----HHHHH
T ss_pred cCC------------------------CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC----hHHHH
Confidence 321 22334566789999999999999999999999988766544333 67788
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 184 VYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 184 v~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
+..+..+.+..++.+..|-..|..|+..+
T Consensus 437 ~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 437 LEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999998766
No 79
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.47 E-value=1.2e-05 Score=69.55 Aligned_cols=147 Identities=13% Similarity=0.193 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++..+|..+.+.|+++++++.|++++... |. ..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~--------------------------------------------~~ 49 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-RT--------------------------------------------HE 49 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-SC--------------------------------------------ST
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CC--------------------------------------------Cc
Confidence 4678899999999999999999998876544 21 01
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHh--------hcCHHHHHHHH
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE--------TKNNKKLKQLY 205 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~--------~~n~~kak~~y 205 (288)
........+|.+|+..|+|++|...++++.+..+.. ....+++..-+.+|.. ++++.+|...|
T Consensus 50 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~---------~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~ 120 (261)
T 3qky_A 50 WAADAQFYLARAYYQNKEYLLAASEYERFIQIYQID---------PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAF 120 (261)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC---------chhHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence 112355788999999999999999999999884321 3445788888999999 99999999999
Q ss_pred HHHHhhhccCCC-hhHHHHHH----------hhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 206 QKALAIKSAIPH-PRIMGIIR----------ECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 206 ~~A~~~a~~I~~-p~i~a~I~----------~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
.+++.....-+. +...+.+. ..-|.+|...|+|+.|...|-++.+.+..
T Consensus 121 ~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 121 QLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 999887543333 43333332 56699999999999999999999987753
No 80
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.46 E-value=2.1e-06 Score=67.58 Aligned_cols=111 Identities=10% Similarity=0.157 Sum_probs=93.3
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
..-+||+.++..|+|++|...+++..++.+ ++ .++|..-+.+|..++++.+|...+.+|+.+....+.
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p-----~~-------~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAIELDP-----SN-------ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence 345799999999999999999999998822 22 367888899999999999999999999999876554
Q ss_pred -hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHH
Q 023037 218 -PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQC 263 (288)
Q Consensus 218 -p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~ 263 (288)
+...|.+...-|.++...++|+.|..+|-.|.+.. .+|.....
T Consensus 78 ~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~---~~~~~~~~ 121 (127)
T 4gcn_A 78 DYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF---RDPELVKK 121 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---CCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---cCHHHHHH
Confidence 77889999999999999999999999999998744 34544433
No 81
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.45 E-value=9.5e-06 Score=77.93 Aligned_cols=187 Identities=13% Similarity=0.043 Sum_probs=132.4
Q ss_pred HHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCc
Q 023037 32 PEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKY-KEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQ 110 (288)
Q Consensus 32 ~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~-~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~ 110 (288)
.+.|++.+.++....++ ...++..+|.+|...|++ ++|+++|++.+..- +....+ ...+-..+... .
T Consensus 84 ~~~al~~l~~~~~~~~~----~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a-----~~~lg~~~~~~--g 151 (474)
T 4abn_A 84 MEKTLQQMEEVLGSAQV----EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEA-----WNQLGEVYWKK--G 151 (474)
T ss_dssp HHHHHHHHHHHHTTCCC----CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHH-----HHHHHHHHHHH--T
T ss_pred HHHHHHHHHHHhccCch----hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHH-----HHHHHHHHHHc--C
Confidence 45666666666554432 356788999999999999 99999999999886 543322 22221112111 1
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhh---------cchhHHHHHHHHHHHhccCCCCCccccccchH
Q 023037 111 NFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDM---------GEYGRMSKILKELHKSCQREDGTDDQKKGSQL 181 (288)
Q Consensus 111 ~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~---------~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~l 181 (288)
+++.....++.+++. .. . .....++|.+|... |+|++|...++++.+..+ ++
T Consensus 152 ~~~~A~~~~~~al~~---~p--~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p-----~~------- 212 (474)
T 4abn_A 152 DVTSAHTCFSGALTH---CK--N--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDV-----LD------- 212 (474)
T ss_dssp CHHHHHHHHHHHHTT---CC--C--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCT-----TC-------
T ss_pred CHHHHHHHHHHHHhh---CC--C--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCC-----CC-------
Confidence 233333333333322 21 2 47888999999999 999999999999999832 22
Q ss_pred HHHHHHHHHHHHhh--------cCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 182 LEVYAIEIQMYTET--------KNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 182 lEv~~lE~~~y~~~--------~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.+++..-+.+|..+ +++.+|...|.+|+.+... ..-.+.....-|.+|...++|+.|..+|-+|.+..
T Consensus 213 ~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 288 (474)
T 4abn_A 213 GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK---ASSNPDLHLNRATLHKYEESYGEALEGFSQAAALD 288 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG---GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC---cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 25677788888888 9999999999999998431 11334556677999999999999999999998754
No 82
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.44 E-value=4.6e-06 Score=77.80 Aligned_cols=209 Identities=11% Similarity=0.047 Sum_probs=118.7
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHH--HHHHHHHHHhcc
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSE--KCINNIMDFVSG 106 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~--k~i~~ild~~~~ 106 (288)
.+++++|++.|++++..+++. ..++..+|.+|...|+++++++.+++.+... |..+..... .+.+........
T Consensus 226 ~~~~~~a~~~~~~al~~~~~~----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~y~~~~~~~~~ 300 (472)
T 4g1t_A 226 GEEEGEGEKLVEEALEKAPGV----TDVLRSAAKFYRRKDEPDKAIELLKKALEYI-PNNAYLHCQIGCCYRAKVFQVMN 300 (472)
T ss_dssp ----CHHHHHHHHHHHHCSSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCccH----HHHHHHHHHHHHHcCchHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHHhhh
Confidence 345567777777777665432 3456789999999999999999999998876 543332211 111111111111
Q ss_pred C---CCcchhhHHHHHHHHHHHHHHhhhh-hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHH
Q 023037 107 S---ASQNFSLLREFYQTTLKALEEAKNE-RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLL 182 (288)
Q Consensus 107 ~---~~~~~~~~~~~~~~~l~~i~~a~ne-r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~ll 182 (288)
. ...........++.+.+.++.+... .........+|.+|...|+|++|...++++.+.... + ...-
T Consensus 301 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~-----~----~~~~ 371 (472)
T 4g1t_A 301 LRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT-----P----VAKQ 371 (472)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC-----H----HHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC-----C----hHHH
Confidence 1 0012223344555566655554432 222366788999999999999999999998876221 1 1112
Q ss_pred HHHHHHHHH-HHhhcCHHHHHHHHHHHHhhhccCCC-------------------hhHHHHHHhhcchhhhhhccHHHHH
Q 023037 183 EVYAIEIQM-YTETKNNKKLKQLYQKALAIKSAIPH-------------------PRIMGIIRECGGKMHMAERQWADAA 242 (288)
Q Consensus 183 Ev~~lE~~~-y~~~~n~~kak~~y~~A~~~a~~I~~-------------------p~i~a~I~~~~G~l~~~ekdy~~A~ 242 (288)
.++..-+.+ +...+++.+|...|.+|+.+....+. |.. +.....-|.+|...|+|++|.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~-~~~~~~LG~~~~~~g~~~~A~ 450 (472)
T 4g1t_A 372 LLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGAD-SEALHVLAFLQELNEKMQQAD 450 (472)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-C-TTHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCCHHHHH
Confidence 233333332 45678999999999999887543221 211 223345689999999999999
Q ss_pred HHHHHHHhhh
Q 023037 243 TDFFEAFKNY 252 (288)
Q Consensus 243 syF~EaF~~y 252 (288)
.+|-.|.+.-
T Consensus 451 ~~y~kALe~~ 460 (472)
T 4g1t_A 451 EDSERGLESG 460 (472)
T ss_dssp ----------
T ss_pred HHHHHHHhcC
Confidence 9999998753
No 83
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.43 E-value=1.3e-05 Score=76.90 Aligned_cols=190 Identities=12% Similarity=0.086 Sum_probs=129.0
Q ss_pred CCCCH-HHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 28 VETDP-EGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 28 ~~~d~-~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
..+++ ++|++.|++++..+++. ..++..+|.+|..+|++++|.++|++.+..- +. .....++-..+..
T Consensus 114 ~~g~~~~~A~~~~~~al~~~p~~----~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~------~~~~~~lg~~~~~ 182 (474)
T 4abn_A 114 VTPDYSPEAEVLLSKAVKLEPEL----VEAWNQLGEVYWKKGDVTSAHTCFSGALTHC-KN------KVSLQNLSMVLRQ 182 (474)
T ss_dssp SSSSCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC-CC------HHHHHHHHHHHTT
T ss_pred hccccHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CC------HHHHHHHHHHHHH
Confidence 46788 99999999999987643 3577899999999999999999999998776 43 1334443333322
Q ss_pred CCCcchhhHHHHHHHHHHHHHHhhh-hhhhHHhhhhHHHHHhhh--------cchhHHHHHHHHHHHhccCCCCCccccc
Q 023037 107 SASQNFSLLREFYQTTLKALEEAKN-ERLWFKTNLKLCKIWFDM--------GEYGRMSKILKELHKSCQREDGTDDQKK 177 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~i~~a~n-er~~f~~~~kL~~lyl~~--------~~y~~~~~ll~elkk~~~~~~~~dDk~~ 177 (288)
...........-++.+.+.++.+-. ..........+|.+|... |+|++|...+++..+..+. .
T Consensus 183 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~------~-- 254 (474)
T 4abn_A 183 LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK------A-- 254 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG------G--
T ss_pred hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC------c--
Confidence 1111111112223333333332211 112235667899999999 9999999999999998221 0
Q ss_pred cchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHH
Q 023037 178 GSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAAT 243 (288)
Q Consensus 178 ~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~s 243 (288)
....+++..-+.+|..++++.+|...|.+|+.+...- | .....-|.++...++++.|..
T Consensus 255 -~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~--~----~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 255 -SSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW--P----EPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp -GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H----HHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--H----HHHHHHHHHHHHHHHHHHHHH
Confidence 1345788899999999999999999999999876432 2 233445666666677766654
No 84
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.42 E-value=4.7e-06 Score=69.99 Aligned_cols=172 Identities=11% Similarity=0.095 Sum_probs=102.2
Q ss_pred chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHH
Q 023037 49 KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEE 128 (288)
Q Consensus 49 ~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~ 128 (288)
..++...++..+|..+...|+++++++++++.+... +... .....+-..+... .+.+.....++.+ ++-
T Consensus 18 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-~~~~-----~~~~~la~~~~~~--~~~~~A~~~~~~~---~~~ 86 (243)
T 2q7f_A 18 GSHMASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN-KEDA-----IPYINFANLLSSV--NELERALAFYDKA---LEL 86 (243)
T ss_dssp ------------------------CCTTHHHHHTTC-TTCH-----HHHHHHHHHHHHT--TCHHHHHHHHHHH---HHH
T ss_pred CchhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC-cccH-----HHHHHHHHHHHHc--CCHHHHHHHHHHH---HHc
Confidence 467788999999999999999999999999998755 4322 2222222222111 1232333333333 322
Q ss_pred hhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 023037 129 AKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKA 208 (288)
Q Consensus 129 a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A 208 (288)
. .....+...+|.+|...|++++|...++++.+..+ ++ .+++..-+.+|...+++.+|...|.++
T Consensus 87 ~---~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~ 151 (243)
T 2q7f_A 87 D---SSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGM-----EN-------GDLFYMLGTVLVKLEQPKLALPYLQRA 151 (243)
T ss_dssp C---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-----CS-------HHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred C---CcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----CC-------HHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 2 22346678899999999999999999999988832 12 257788899999999999999999999
Q ss_pred HhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 209 LAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 209 ~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
...... +| .+...-|.++...|+|+.|..+|-++.+..
T Consensus 152 ~~~~~~--~~----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 152 VELNEN--DT----EARFQFGMCLANEGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp HHHCTT--CH----HHHHHHHHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred HHhCCc--cH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 876432 22 345667888999999999999999998754
No 85
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.42 E-value=8.9e-06 Score=75.83 Aligned_cols=208 Identities=12% Similarity=0.090 Sum_probs=122.3
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
..++++|++.|++++..+|+..++ -..+-.+...+...|+++++++.|++.+..- +..+.....-.+ .+-.+....
T Consensus 151 ~~~y~~A~~~~~kal~~~p~~~~~-~~~~~~~~~~l~~~~~~~~al~~~~~al~l~-p~~~~~~~~l~~--~~~~~~~~~ 226 (472)
T 4g1t_A 151 GNQNERAKVCFEKALEKKPKNPEF-TSGLAIASYRLDNWPPSQNAIDPLRQAIRLN-PDNQYLKVLLAL--KLHKMREEG 226 (472)
T ss_dssp TTHHHHHHHHHHHHHHHSTTCHHH-HHHHHHHHHHHHHSCCCCCTHHHHHHHHHHC-SSCHHHHHHHHH--HHHHCC---
T ss_pred cccHHHHHHHHHHHHHhCCCCHHH-HHHHHHHHHHhcCchHHHHHHHHHHHHhhcC-CcchHHHHHHHH--HHHHHHhhh
Confidence 356889999999999988765443 2222223333556788889999999888775 543322221111 111121111
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccc--cc--------
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK--KG-------- 178 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~--~~-------- 178 (288)
...+.....++.+++ .......+..++|.+|...|+++++...++++.+..+.. .+-- .|
T Consensus 227 -~~~~~a~~~~~~al~------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~y~~~~~ 296 (472)
T 4g1t_A 227 -EEEGEGEKLVEEALE------KAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNN---AYLHCQIGCCYRAKVF 296 (472)
T ss_dssp ----CHHHHHHHHHHH------HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHH------hCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCh---HHHHHHHHHHHHHHHH
Confidence 112223333333222 122333566789999999999999988888887773321 0000 00
Q ss_pred ----------------------------------chHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHH
Q 023037 179 ----------------------------------SQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 224 (288)
Q Consensus 179 ----------------------------------~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I 224 (288)
....+++..-+.+|..++++.+|...|.+|+.+.. .|.....+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~---~~~~~~~~ 373 (472)
T 4g1t_A 297 QVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKEL---TPVAKQLL 373 (472)
T ss_dssp HHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCC---CHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCC---CChHHHHH
Confidence 00011233456788999999999999999987532 23333333
Q ss_pred Hh-hcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 225 RE-CGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 225 ~~-~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
.. .|+..+...|++++|..+|-+|.+...
T Consensus 374 ~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~ 403 (472)
T 4g1t_A 374 HLRYGNFQLYQMKCEDKAIHHFIEGVKINQ 403 (472)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 33 344455688999999999999987654
No 86
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=98.39 E-value=6.6e-06 Score=79.83 Aligned_cols=213 Identities=14% Similarity=0.156 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHhccC-CCcchhhHHHHHHHHH----HHHH
Q 023037 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV--TRNYSEKCINNIMDFVSGS-ASQNFSLLREFYQTTL----KALE 127 (288)
Q Consensus 55 kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v--~ka~~~k~i~~ild~~~~~-~~~~~~~~~~~~~~~l----~~i~ 127 (288)
+.|..+++-..-.+++...-......+.|++..- +--.+=+.+..++..++.. .+.+...++..+.+.. -.+.
T Consensus 43 ~~l~~~ve~~~~~~~w~~f~~~v~~yl~~~rdv~~~sl~~s~dll~~~~~~l~~a~~~~~~~wi~~l~p~~~~~~~~l~~ 122 (455)
T 3t5v_B 43 KQLETFVEQHPAMPNDTRFKIMCTSFLNYARDVDPWSAWSSSDLIFEFYQCLINCLINDNAPHIEMLIPVATRETEFIIN 122 (455)
T ss_dssp HHHHHHHHHSTTCCSCHHHHHHHHHHHHHHHHCCTTCSSTTHHHHHHHHHHHHTTSSSTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHcCCCCchHHHhHHHHHHHHHHHHH
Confidence 3344444332222778888888888888884321 1223345566666655554 2222233322333322 2223
Q ss_pred Hhhh-hhhhHHhhhhHHHHHhhhcc---hhHHHHHHHHHHHhccCCCCCcc----ccccchHHHHHHHHHHHHHhhcCHH
Q 023037 128 EAKN-ERLWFKTNLKLCKIWFDMGE---YGRMSKILKELHKSCQREDGTDD----QKKGSQLLEVYAIEIQMYTETKNNK 199 (288)
Q Consensus 128 ~a~n-er~~f~~~~kL~~lyl~~~~---y~~~~~ll~elkk~~~~~~~~dD----k~~~~~llEv~~lE~~~y~~~~n~~ 199 (288)
++.. ++... ....++ .+++..+|.++=..|-...+.+. ..|+..++-+-....++|++++|..
T Consensus 123 ~a~~lD~~~~---------~~~~~~~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~ 193 (455)
T 3t5v_B 123 LAGKLDSFHL---------QLHTRSHQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQ 193 (455)
T ss_dssp HHHHHHHTHH---------HHTCCTTHHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCT
T ss_pred HHHHhhhhHh---------hhcccchhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHH
Confidence 3321 11110 112233 33377788888888876544221 1266778888888889999999999
Q ss_pred HHHHHHHHHHhhhccCC---C-h-hHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh-hh-hhC----ChhHHHHhHHHH
Q 023037 200 KLKQLYQKALAIKSAIP---H-P-RIMGIIRECGGKMHMAERQWADAATDFFEAFKN-YD-EAG----NQRRIQCLKYLV 268 (288)
Q Consensus 200 kak~~y~~A~~~a~~I~---~-p-~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~-y~-e~g----~~~a~~~LKY~~ 268 (288)
-++......... +-+| . | .-++.=.-..|++|+.+.||.+|+.+|.+||+. .. ++| ...+..+|||+|
T Consensus 194 lckni~k~i~~~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyLI 272 (455)
T 3t5v_B 194 LCSNIFKNFQPK-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMI 272 (455)
T ss_dssp THHHHHHTHHHH-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccC-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHHH
Confidence 999888665543 2222 2 3 467777889999999999999999999999998 55 444 357788999999
Q ss_pred HHHHhcCCC
Q 023037 269 LANMLMESE 277 (288)
Q Consensus 269 L~~il~~~~ 277 (288)
.|+||+|.-
T Consensus 273 pv~LLlG~~ 281 (455)
T 3t5v_B 273 PTGLILGKM 281 (455)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 999999864
No 87
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.37 E-value=7e-06 Score=83.84 Aligned_cols=99 Identities=9% Similarity=0.006 Sum_probs=73.3
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
....+||.+|.+.|+|++|.+.+++..++-+ ++ .+.|..-+.+|..+|++.+|...|.+|+.+.-.-
T Consensus 78 ~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P-----~~-------~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~- 144 (723)
T 4gyw_A 78 DAYSNMGNTLKEMQDVQGALQCYTRAIQINP-----AF-------ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDF- 144 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-
Confidence 4566788889999999998888888888721 12 3678888888889999999999999988875332
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
| .....-|.++...++|+.|..+|-++.+...
T Consensus 145 -~----~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~ 176 (723)
T 4gyw_A 145 -P----DAYCNLAHCLQIVCDWTDYDERMKKLVSIVA 176 (723)
T ss_dssp -H----HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred -h----HHHhhhhhHHHhcccHHHHHHHHHHHHHhCh
Confidence 2 2234446777788888888888877766543
No 88
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=98.37 E-value=1.3e-07 Score=82.34 Aligned_cols=62 Identities=16% Similarity=0.211 Sum_probs=55.2
Q ss_pred HHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHHHHHHHhcCCCCCCCCC
Q 023037 221 MGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDG 283 (288)
Q Consensus 221 ~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~~L~~il~~~~~dpF~s 283 (288)
++.=+--.|++|+.++||.+|+.+|.+||+++++.+..++.++|||+|.|+|++|. +.||+.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~-iP~~~l 74 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGH-MPTVEL 74 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTC-EECHHH
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCC-CCCHHH
Confidence 34455678999999999999999999999999999989999999999999999997 776654
No 89
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.36 E-value=8.9e-06 Score=69.58 Aligned_cols=189 Identities=11% Similarity=0.019 Sum_probs=102.0
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++. ..++..+|.+|...|+++++++++++.+... +..+.. ...+-..+...
T Consensus 55 ~~~~~~~A~~~~~~al~~~~~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-~~~~~~-----~~~la~~~~~~ 124 (275)
T 1xnf_A 55 SLGLRALARNDFSQALAIRPDM----PEVFNYLGIYLTQAGNFDAAYEAFDSVLELD-PTYNYA-----HLNRGIALYYG 124 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHH-----HHHHHHHHHHT
T ss_pred HcccHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-ccccHH-----HHHHHHHHHHh
Confidence 4678889999999988876542 2456788888888888888888888888765 432221 22211111111
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCC----------------
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG---------------- 171 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~---------------- 171 (288)
.+.+.....++.++ +...+.. ... ....+....|+++++...+++.....+....
T Consensus 125 --g~~~~A~~~~~~a~---~~~~~~~-~~~---~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (275)
T 1xnf_A 125 --GRDKLAQDDLLAFY---QDDPNDP-FRS---LWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQT 195 (275)
T ss_dssp --TCHHHHHHHHHHHH---HHCTTCH-HHH---HHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHH
T ss_pred --ccHHHHHHHHHHHH---HhCCCCh-HHH---HHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHH
Confidence 11222222222222 2111111 000 1111223344455544444433333211100
Q ss_pred ----------CccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHH
Q 023037 172 ----------TDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADA 241 (288)
Q Consensus 172 ----------~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A 241 (288)
.+.. ......+++..-+.+|..+|++.+|...|.+++.+...- +... |..++..++|+.|
T Consensus 196 a~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~-------~~~~~~l~~~~~a 265 (275)
T 1xnf_A 196 LMERLKADATDNTS-LAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN--FVEH-------RYALLELSLLGQD 265 (275)
T ss_dssp HHHHHHHHCCSHHH-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTT--CHHH-------HHHHHHHHHHHHC
T ss_pred HHHHHHHHhccccc-ccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchh--HHHH-------HHHHHHHHHHHhh
Confidence 0110 001236888999999999999999999999998875211 2221 5667788888888
Q ss_pred HHHH
Q 023037 242 ATDF 245 (288)
Q Consensus 242 ~syF 245 (288)
...+
T Consensus 266 ~~~~ 269 (275)
T 1xnf_A 266 QDDL 269 (275)
T ss_dssp ----
T ss_pred HHHH
Confidence 7765
No 90
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.35 E-value=1.2e-05 Score=66.89 Aligned_cols=103 Identities=11% Similarity=0.010 Sum_probs=52.7
Q ss_pred hhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC---
Q 023037 140 LKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP--- 216 (288)
Q Consensus 140 ~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~--- 216 (288)
.++|.+|...|+|++|...+++..+..+ ++ .+++..-+.+|..++++.+|...|.++......-.
T Consensus 41 ~~lg~~~~~~g~~~~A~~~~~~al~~~~-----~~-------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 108 (213)
T 1hh8_A 41 FNIGCMYTILKNMTEAEKAFTRSINRDK-----HL-------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLID 108 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEE
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCc-----cc-------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHH
Confidence 3455555555555555555555555411 01 24445555555555555555555555555433222
Q ss_pred -------ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 217 -------HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 217 -------~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
...-.+.+...-|.+|...|+|+.|..+|-.+.+....
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 109 YKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp CGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 21112344455566666666666666666666665443
No 91
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.32 E-value=1.1e-05 Score=78.58 Aligned_cols=155 Identities=11% Similarity=0.045 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++.++.+++. ..++..+|.+|..+|+++++.++|++.+..- +.-
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~-------------------- 56 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQD----FVAWLMLADAELGMGDTTAGEMAVQRGLALH-PGH-------------------- 56 (568)
T ss_dssp -------------------CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-TTC--------------------
T ss_pred CccHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCC--------------------
Confidence 468899999999999876542 3578899999999999999999998887654 211
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
.....++|.+|...|+|++|...++++.+..+ ++ .+++..-
T Consensus 57 ---------------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~l 97 (568)
T 2vsy_A 57 ---------------------------PEAVARLGRVRWTQQRHAEAAVLLQQASDAAP-----EH-------PGIALWL 97 (568)
T ss_dssp ---------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHH
T ss_pred ---------------------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC-----CC-------HHHHHHH
Confidence 11335677777788888888777777777621 12 3566667
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhh---ccHHHHHHHHHHHHhhhh
Q 023037 189 IQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAE---RQWADAATDFFEAFKNYD 253 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~e---kdy~~A~syF~EaF~~y~ 253 (288)
+.+|..++++.+|...|.+++.....- | .....-|.++... ++++.|..+|-++.+...
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~--~----~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEE--P----YITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGV 159 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC--H----HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC--H----HHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCC
Confidence 777778888888888888877764321 2 2334446666667 777888888777776543
No 92
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.31 E-value=7.1e-06 Score=83.81 Aligned_cols=156 Identities=14% Similarity=0.143 Sum_probs=117.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++.++.+++. ..++.+||.+|.++|++++|+++|++.+.+- +.... +..++=..+...
T Consensus 21 ~~G~~~eAi~~~~kAl~l~P~~----~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~-P~~~~-----a~~nLg~~l~~~ 90 (723)
T 4gyw_A 21 EQGNIEEAVRLYRKALEVFPEF----AAAHSNLASVLQQQGKLQEALMHYKEAIRIS-PTFAD-----AYSNMGNTLKEM 90 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH-----HHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHH-----HHHHHHHHHHHc
Confidence 3579999999999999987653 4578999999999999999999999999886 65433 333322222211
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+.+.....|+.+++. +-.......+||.+|.+.|++++|...+++..++-+ ++ .+++..
T Consensus 91 --g~~~~A~~~~~kAl~l------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P-----~~-------~~a~~~ 150 (723)
T 4gyw_A 91 --QDVQGALQCYTRAIQI------NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP-----DF-------PDAYCN 150 (723)
T ss_dssp --TCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----CC-------HHHHHH
T ss_pred --CCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------hHHHhh
Confidence 2233444444444432 223356788999999999999999999999999822 22 377888
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
-+.+|..++++..|.+.|.+++.+..
T Consensus 151 L~~~l~~~g~~~~A~~~~~kal~l~~ 176 (723)
T 4gyw_A 151 LAHCLQIVCDWTDYDERMKKLVSIVA 176 (723)
T ss_dssp HHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred hhhHHHhcccHHHHHHHHHHHHHhCh
Confidence 89999999999999999999988754
No 93
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.31 E-value=2.5e-05 Score=66.03 Aligned_cols=171 Identities=15% Similarity=0.137 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHH-----------HHHHHHHHHhccCCCcchhhHHHHHHHHH
Q 023037 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSE-----------KCINNIMDFVSGSASQNFSLLREFYQTTL 123 (288)
Q Consensus 55 kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~-----------k~i~~ild~~~~~~~~~~~~~~~~~~~~l 123 (288)
..+.+.|..+.+.|++++++++|++.+..- |.-+..... +..+++-..+.. . .+++.....++.++
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~-g~~~~A~~~~~~al 81 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALN-IDRTEMYYWTNVDKNSEISSKLATELALAYKK-N-RNYDKAYLFYKELL 81 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCChHHHHHhhhcchhhhhHHHHHHHHHHHHH-C-CCHHHHHHHHHHHH
Confidence 345677888888899999999888887765 443222111 000000000000 0 11112222222222
Q ss_pred HHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcC--HHHH
Q 023037 124 KALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKN--NKKL 201 (288)
Q Consensus 124 ~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n--~~ka 201 (288)
+-. -.......++|.+|...|++++|...++++.+.-+ ++. +++..-+.+|...++ ..++
T Consensus 82 ---~~~---p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P-----~~~-------~a~~~lg~~~~~~~~~~~~~~ 143 (208)
T 3urz_A 82 ---QKA---PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEA-----DNL-------AANIFLGNYYYLTAEQEKKKL 143 (208)
T ss_dssp ---HHC---TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----TCH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHC---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----CCH-------HHHHHHHHHHHHHhHHHHHHH
Confidence 111 11223445555555555555555555555555511 111 334444444433332 2222
Q ss_pred HHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 202 KQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 202 k~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
...|.++. -+.|.-.+ ....|..+...++|+.|..+|-+|.+.+-
T Consensus 144 ~~~~~~~~-----~~~~~~~a--~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 144 ETDYKKLS-----SPTKMQYA--RYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHC--------CCCHHHHH--HHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHh-----CCCchhHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 22222221 01122111 23347778888999999999999998764
No 94
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.28 E-value=5e-05 Score=64.57 Aligned_cols=189 Identities=7% Similarity=0.091 Sum_probs=128.9
Q ss_pred HHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCC--c
Q 023037 33 EGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSAS--Q 110 (288)
Q Consensus 33 ~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~--~ 110 (288)
.+|++.|++..+.. . ..+...|+.+|...|++++++++|++....- -..+..++=..+.. .+ .
T Consensus 3 ~eA~~~~~~aa~~g----~--~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g--------~~~a~~~lg~~y~~-~g~~~ 67 (212)
T 3rjv_A 3 TEPGSQYQQQAEAG----D--RRAQYYLADTWVSSGDYQKAEYWAQKAAAQG--------DGDALALLAQLKIR-NPQQA 67 (212)
T ss_dssp -CTTHHHHHHHHTT----C--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHTTS-STTSC
T ss_pred chHHHHHHHHHHCC----C--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHc-CCCCC
Confidence 46788888887642 2 4788999999999999999999999986532 12233332222222 11 1
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHH
Q 023037 111 NFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYA 186 (288)
Q Consensus 111 ~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~ 186 (288)
+.+....+++.+. +........+|+.+|.. .+++.++...+++.-+. ++. ....+.+.
T Consensus 68 ~~~~A~~~~~~A~--------~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-------~~~---~~~~~a~~ 129 (212)
T 3rjv_A 68 DYPQARQLAEKAV--------EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD-------SES---DAAVDAQM 129 (212)
T ss_dssp CHHHHHHHHHHHH--------HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS-------TTS---HHHHHHHH
T ss_pred CHHHHHHHHHHHH--------HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc-------CCC---cchHHHHH
Confidence 3434444444332 22344678899999998 89999999998887655 331 13457777
Q ss_pred HHHHHHHh----hcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhh------hccHHHHHHHHHHHHhhhhhhC
Q 023037 187 IEIQMYTE----TKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMA------ERQWADAATDFFEAFKNYDEAG 256 (288)
Q Consensus 187 lE~~~y~~----~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~------ekdy~~A~syF~EaF~~y~e~g 256 (288)
.-+.+|.. .+|+.+|...|.+|.... .+|.. ...-|.+|.. ++|+++|..+|-.|.+ .|
T Consensus 130 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~---~~~~a----~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~----~g 198 (212)
T 3rjv_A 130 LLGLIYASGVHGPEDDVKASEYFKGSSSLS---RTGYA----EYWAGMMFQQGEKGFIEPNKQKALHWLNVSCL----EG 198 (212)
T ss_dssp HHHHHHHHTSSSSCCHHHHHHHHHHHHHTS---CTTHH----HHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHH----HT
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHcC---CCHHH----HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHH----cC
Confidence 88889988 889999999999997661 12322 2334556653 4599999999999965 48
Q ss_pred ChhHHHHhH
Q 023037 257 NQRRIQCLK 265 (288)
Q Consensus 257 ~~~a~~~LK 265 (288)
++.+...|.
T Consensus 199 ~~~A~~~l~ 207 (212)
T 3rjv_A 199 FDTGCEEFD 207 (212)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 888876654
No 95
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.28 E-value=4e-05 Score=63.60 Aligned_cols=141 Identities=18% Similarity=0.058 Sum_probs=104.2
Q ss_pred HHHhhccc-CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 023037 20 CSILEKGL-VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCIN 98 (288)
Q Consensus 20 ~y~~ak~~-~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~ 98 (288)
.|..|... ..+++++|++.|+++++.. ..++.++|.+|...|++++++++|++.+... +.
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~~~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~----------- 69 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQDPH-------SRICFNIGCMYTILKNMTEAEKAFTRSINRD-KH----------- 69 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSSSCC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT-----------
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHcCCC-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cc-----------
Confidence 34444443 5689999999999987321 3588899999999999999999988876543 21
Q ss_pred HHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccc--
Q 023037 99 NIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK-- 176 (288)
Q Consensus 99 ~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~-- 176 (288)
......++|.+|...|+|++|...++++.+..+..+..+-..
T Consensus 70 ------------------------------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 113 (213)
T 1hh8_A 70 ------------------------------------LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILG 113 (213)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGT
T ss_pred ------------------------------------chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhc
Confidence 012356789999999999999999999998754321000000
Q ss_pred --ccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 023037 177 --KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (288)
Q Consensus 177 --~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I 215 (288)
......+++..-+.+|..+|++.+|...|.+++.+...-
T Consensus 114 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 114 LQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp BCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 113456899999999999999999999999999876543
No 96
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.28 E-value=0.00033 Score=62.71 Aligned_cols=196 Identities=13% Similarity=0.176 Sum_probs=113.8
Q ss_pred cCCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHH-----------HHHHHHhhhhhhhHHH
Q 023037 27 LVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYRE-----------MLTYIKSAVTRNYSEK 95 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~-----------~l~~~~~~v~ka~~~k 95 (288)
+..+++.+|++.++++...+++. ...+..-+++.|..+|++++++..++. +-.+. ......++
T Consensus 10 ~~~g~y~~ai~~~~~~~~~~p~~---~~e~~~~l~r~yi~~g~~~~al~~~~~~~~~~~~a~~~la~~~---~~~~~~~~ 83 (291)
T 3mkr_A 10 FYIGSYQQCINEAQRVKPSSPER---DVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYL---ASHSRRDA 83 (291)
T ss_dssp HHTTCHHHHHHHHHHSCCCSHHH---HHHHHHHHHHHHHHTTCHHHHHHHSCTTSCHHHHHHHHHHHHH---HCSTTHHH
T ss_pred HHHHHHHHHHHHHHhcccCCchh---hHHHHHHHHHHHHHCCCHHHHHHHhcccCChhHHHHHHHHHHH---cCCCcHHH
Confidence 45678888888888776655432 123445567788888888887754421 11111 11112233
Q ss_pred HHHHHHHHhcc--CCCcchhhHHHHH------------HHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHH
Q 023037 96 CINNIMDFVSG--SASQNFSLLREFY------------QTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKE 161 (288)
Q Consensus 96 ~i~~ild~~~~--~~~~~~~~~~~~~------------~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~e 161 (288)
.+..+-+.+.. .|+ ...-.+ +.+++.++. .....+...++.+|...|++++|...+++
T Consensus 84 A~~~l~~ll~~~~~P~----~~~~~~~la~~~~~~g~~~~Al~~l~~----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~ 155 (291)
T 3mkr_A 84 IVAELDREMSRSVDVT----NTTFLLMAASIYFYDQNPDAALRTLHQ----GDSLECMAMTVQILLKLDRLDLARKELKK 155 (291)
T ss_dssp HHHHHHHHHHSCCCCS----CHHHHHHHHHHHHHTTCHHHHHHHHTT----CCSHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCC----CHHHHHHHHHHHHHCCCHHHHHHHHhC----CCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 33322222221 122 111111 222222222 23345677888899999999999988888
Q ss_pred HHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHH
Q 023037 162 LHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADA 241 (288)
Q Consensus 162 lkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A 241 (288)
+.+. +.. ..+..+...-..++...+++.+|...|.++... +|. .+.+...-|.+++..|+|+.|
T Consensus 156 ~~~~-------~p~---~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~-----~p~-~~~~~~~la~~~~~~g~~~eA 219 (291)
T 3mkr_A 156 MQDQ-------DED---ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK-----CSP-TLLLLNGQAACHMAQGRWEAA 219 (291)
T ss_dssp HHHH-------CTT---CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-----SCC-CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhh-------CcC---cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh-----CCC-cHHHHHHHHHHHHHcCCHHHH
Confidence 8887 221 222222222234455667889999999888876 221 233455668889999999999
Q ss_pred HHHHHHHHhhh
Q 023037 242 ATDFFEAFKNY 252 (288)
Q Consensus 242 ~syF~EaF~~y 252 (288)
..+|-++.+..
T Consensus 220 ~~~l~~al~~~ 230 (291)
T 3mkr_A 220 EGVLQEALDKD 230 (291)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 97
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.27 E-value=7.3e-05 Score=55.79 Aligned_cols=131 Identities=16% Similarity=0.229 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhh
Q 023037 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERL 134 (288)
Q Consensus 55 kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~ 134 (288)
.++..++.++...|+++++++++++.+... +.-
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~---------------------------------------------- 34 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRS---------------------------------------------- 34 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTC----------------------------------------------
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcC-Ccc----------------------------------------------
Confidence 467889999999999999999988875432 110
Q ss_pred hHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc
Q 023037 135 WFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA 214 (288)
Q Consensus 135 ~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~ 214 (288)
..+...++.++...|+++++..+++++.+..+ ++ ..++..-+.+|...+++.+|...+.++......
T Consensus 35 -~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 101 (136)
T 2fo7_A 35 -AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----RS-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 101 (136)
T ss_dssp -HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred -hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC-----Cc-------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 01224567788888899998888888877721 11 245666788888889999999999888775321
Q ss_pred CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 215 IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 215 I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
+| .+...-|.++...|+++.|..+|-++.+.
T Consensus 102 --~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 102 --SA----EAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp --CH----HHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred --Ch----HHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 12 22334577788889999999888887653
No 98
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.25 E-value=8.8e-06 Score=65.63 Aligned_cols=121 Identities=11% Similarity=0.008 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.++.+.|++.|++.+..+++. ..+...+|.+|.+.|++++|+++|++.+..- |.-
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~----~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-p~~-------------------- 64 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQK----SIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-ERD-------------------- 64 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHH----HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC--------------------
T ss_pred cChHHHHHHHHHHhcccCccc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCC--------------------
Confidence 357899999999999876542 3345689999999999999999999987765 321
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
..+...+|.+|...|++++|...++++.+..+ ++ .+++..-
T Consensus 65 ---------------------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~l 105 (150)
T 4ga2_A 65 ---------------------------PKAHRFLGLLYELEENTDKAVECYRRSVELNP-----TQ-------KDLVLKI 105 (150)
T ss_dssp ---------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHH
T ss_pred ---------------------------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCC-----CC-------HHHHHHH
Confidence 11344577777788888888777777777621 22 2566667
Q ss_pred HHHHHhhcCHHHH-HHHHHHHHhhhc
Q 023037 189 IQMYTETKNNKKL-KQLYQKALAIKS 213 (288)
Q Consensus 189 ~~~y~~~~n~~ka-k~~y~~A~~~a~ 213 (288)
+.+|..++++.++ +..+.+|..+..
T Consensus 106 a~~~~~~~~~~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 106 AELLCKNDVTDGRAKYWVERAAKLFP 131 (150)
T ss_dssp HHHHHHHCSSSSHHHHHHHHHHHHST
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhCc
Confidence 7777777777654 344577776653
No 99
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.17 E-value=0.00069 Score=64.34 Aligned_cols=179 Identities=10% Similarity=0.034 Sum_probs=99.6
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYR----LGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDF 103 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~----~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~ 103 (288)
...|+++|++.|++..+.. . ..|...||.+|.. .+++++++++|++....- .. .+..++=..
T Consensus 55 ~~~~~~~A~~~~~~a~~~~----~--~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~-~~-------~a~~~Lg~~ 120 (490)
T 2xm6_A 55 TTKDLTQAMDWFRRAAEQG----Y--TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG-LP-------QAQQNLGVM 120 (490)
T ss_dssp SCCCHHHHHHHHHHHHHTT----C--HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CH-------HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCC----C--HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC-CH-------HHHHHHHHH
Confidence 3678999999999998652 1 3688899999999 999999999999886532 11 111111111
Q ss_pred hccCC--CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCccccc
Q 023037 104 VSGSA--SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQKK 177 (288)
Q Consensus 104 ~~~~~--~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk~~ 177 (288)
+.... ..+.+....+++.+.+ .........|+.+|.. .++++++...+++.-+. ++.
T Consensus 121 y~~g~g~~~~~~~A~~~~~~a~~--------~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~~~-- 183 (490)
T 2xm6_A 121 YHEGNGVKVDKAESVKWFRLAAE--------QGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------GNV-- 183 (490)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TCH--
T ss_pred HHcCCCCCCCHHHHHHHHHHHHH--------CCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CCH--
Confidence 11100 1233333333333322 1123455667777776 66777777666666544 222
Q ss_pred cchHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhh----hccHHHHHHHHHHHH
Q 023037 178 GSQLLEVYAIEIQMYTE----TKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMA----ERQWADAATDFFEAF 249 (288)
Q Consensus 178 ~~~llEv~~lE~~~y~~----~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~----ekdy~~A~syF~EaF 249 (288)
+.+..-+.+|.. .+|+.+|...|.+|.... +|.. ...-|.+|.. .+|+++|..+|-.+.
T Consensus 184 -----~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~----~~~a----~~~lg~~y~~g~g~~~~~~~A~~~~~~a~ 250 (490)
T 2xm6_A 184 -----WSCNQLGYMYSRGLGVERNDAISAQWYRKSATSG----DELG----QLHLADMYYFGIGVTQDYTQSRVLFSQSA 250 (490)
T ss_dssp -----HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHHH----HHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC----CHHH----HHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 444444555555 566666666666665432 2221 1122444443 555555555555554
Q ss_pred h
Q 023037 250 K 250 (288)
Q Consensus 250 ~ 250 (288)
+
T Consensus 251 ~ 251 (490)
T 2xm6_A 251 E 251 (490)
T ss_dssp T
T ss_pred H
Confidence 3
No 100
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.17 E-value=6.3e-05 Score=75.68 Aligned_cols=207 Identities=10% Similarity=0.055 Sum_probs=128.7
Q ss_pred cCCCCHHHHHHHHHHhh--------cCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 023037 27 LVETDPEGALAGFAEVV--------AMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCIN 98 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii--------~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~ 98 (288)
...+++++|++.|++++ ..+++. ..++..++.+|..+|++++|++.|++.+..- +.-..+......-
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~----~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~ 476 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSES----VELPLMEVRALLDLGDVAKATRKLDDLAERV-GWRWRLVWYRAVA 476 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTC----SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-CCCHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccc----hhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-cchHHHHHHHHHH
Confidence 77889999999999999 444332 3567899999999999999999999999876 6543333322221
Q ss_pred HHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccccc
Q 023037 99 NIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKG 178 (288)
Q Consensus 99 ~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~ 178 (288)
+-.. .+.+.....|+.+++ -..+ ......++|.+|...|+|++ ...++++.+.-+ ++
T Consensus 477 --~~~~-----g~~~~A~~~~~~al~---l~P~---~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P-----~~---- 533 (681)
T 2pzi_A 477 --ELLT-----GDYDSATKHFTEVLD---TFPG---ELAPKLALAATAELAGNTDE-HKFYQTVWSTND-----GV---- 533 (681)
T ss_dssp --HHHH-----TCHHHHHHHHHHHHH---HSTT---CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT-----TC----
T ss_pred --HHHc-----CCHHHHHHHHHHHHH---hCCC---ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCC-----ch----
Confidence 1111 123333334443333 2221 23566799999999999999 999999988821 22
Q ss_pred chHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHH-HHHHHHHHhhhhhhC-
Q 023037 179 SQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADA-ATDFFEAFKNYDEAG- 256 (288)
Q Consensus 179 ~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A-~syF~EaF~~y~e~g- 256 (288)
.+.+..-+.+|..+|++.+|.+.|.+|..+...- +.....-|.+++..++...| ...|-+|.+.+....
T Consensus 534 ---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~------~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~~~ 604 (681)
T 2pzi_A 534 ---ISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHF------TTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALPP 604 (681)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTH------HHHHHHHHHHTC-------CCHHHHHHHHHHHHTSCT
T ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHhhcccCccc------HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhCCC
Confidence 3678888999999999999999999987654321 22233344555444443333 344444444444332
Q ss_pred -ChhHHHHhHHHHHHH
Q 023037 257 -NQRRIQCLKYLVLAN 271 (288)
Q Consensus 257 -~~~a~~~LKY~~L~~ 271 (288)
++++ ..++-.++..
T Consensus 605 ~~~~~-~~l~~~ll~~ 619 (681)
T 2pzi_A 605 TEPRV-LQIRALVLGG 619 (681)
T ss_dssp TSTTH-HHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHH
Confidence 2332 3345555543
No 101
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.12 E-value=8.8e-05 Score=56.38 Aligned_cols=114 Identities=10% Similarity=0.013 Sum_probs=89.5
Q ss_pred hhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCCh
Q 023037 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHP 218 (288)
Q Consensus 139 ~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p 218 (288)
...+|..++..|+|++|...++++.+..+. + ....+++..-+.+|..+|++.+|...|.++......- |
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-----~----~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~--~ 73 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPN-----G----VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH--D 73 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-----S----TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS--T
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-----C----cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC--c
Confidence 467899999999999999999999887321 1 3445788889999999999999999999998865322 2
Q ss_pred hHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHH
Q 023037 219 RIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKY 266 (288)
Q Consensus 219 ~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY 266 (288)
..+.....-|.+++..|+|+.|..+|-++.+.+. +++.+..++..
T Consensus 74 -~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p--~~~~~~~a~~~ 118 (129)
T 2xev_A 74 -KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYP--GSDAARVAQER 118 (129)
T ss_dssp -THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--TSHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC--CChHHHHHHHH
Confidence 2344556679999999999999999999998773 45655555444
No 102
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.10 E-value=6.9e-05 Score=73.19 Aligned_cols=150 Identities=12% Similarity=0.042 Sum_probs=116.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHH
Q 023037 58 KQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFK 137 (288)
Q Consensus 58 ~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~ 137 (288)
.+.+.-+..+|+|++|..+|++.+...+.. ++ + +.--+++
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~----------------lg--~----------------------~Hp~~a~ 352 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPV----------------FA--D----------------------TNLYVLR 352 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTT----------------BC--T----------------------TSHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHh----------------cC--C----------------------CCHHHHH
Confidence 344455678888888888888888776222 21 1 1223557
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc---
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA--- 214 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~--- 214 (288)
+..+||.+|..+|+|++|..+.+++.......-|.+. ..++-.+..-+.+|..+|++.+|..+|.+|+.+-..
T Consensus 353 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H----p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 353 LLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN----AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 7889999999999999999999998887555444333 567888888999999999999999999999988874
Q ss_pred CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 215 IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 215 I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
--||.+. .+...-+..+++.+.|+.|-..++.+-+.+
T Consensus 429 ~~Hp~~~-~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 429 PSHPITK-DLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TTSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457655 466888899999999999999999985544
No 103
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.10 E-value=8.1e-05 Score=60.33 Aligned_cols=133 Identities=13% Similarity=0.233 Sum_probs=89.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++. ..++..+|.+|...|++++++++|++.+... +.-+
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~------------------ 78 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQN----SEQWALLGEYYLWQNDYSNSLLAYRQALQLR-GENA------------------ 78 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-CSCH------------------
T ss_pred hccCHHHHHHHHHHHHHhCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCH------------------
Confidence 5678899999999999887643 2467899999999999999999999887765 3210
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHH-Hhhhcch--hHHHHHHHHHHHhccCCCCCccccccchHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKI-WFDMGEY--GRMSKILKELHKSCQREDGTDDQKKGSQLLEV 184 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~l-yl~~~~y--~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv 184 (288)
.+...+|.+ |+..|++ +++...++++.+..+ ++ .++
T Consensus 79 -----------------------------~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~ 117 (177)
T 2e2e_A 79 -----------------------------ELYAALATVLYYQASQHMTAQTRAMIDKALALDS-----NE-------ITA 117 (177)
T ss_dssp -----------------------------HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT-----TC-------HHH
T ss_pred -----------------------------HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC-----Cc-------HHH
Confidence 122345555 6677777 777777777777621 11 255
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-hhHHHHH
Q 023037 185 YAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGII 224 (288)
Q Consensus 185 ~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p~i~a~I 224 (288)
+..-+.+|..++++.+|...|.+++.....-+. ..+.+.|
T Consensus 118 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i 158 (177)
T 2e2e_A 118 LMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESI 158 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 666677777778888888888877776654333 3444444
No 104
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.07 E-value=0.00054 Score=61.33 Aligned_cols=183 Identities=9% Similarity=0.076 Sum_probs=114.4
Q ss_pred CCCHHHHHHHHHHhhcCC--ccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 29 ETDPEGALAGFAEVVAME--PEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~--~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
.++.++|++.+++++..+ |+.. .++..+|.+|...|+++++++++++ + ....+...+...+..
T Consensus 78 ~~~~~~A~~~l~~ll~~~~~P~~~----~~~~~la~~~~~~g~~~~Al~~l~~--~---------~~~~~~~~l~~~~~~ 142 (291)
T 3mkr_A 78 HSRRDAIVAELDREMSRSVDVTNT----TFLLMAASIYFYDQNPDAALRTLHQ--G---------DSLECMAMTVQILLK 142 (291)
T ss_dssp STTHHHHHHHHHHHHHSCCCCSCH----HHHHHHHHHHHHTTCHHHHHHHHTT--C---------CSHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhcccCCCCH----HHHHHHHHHHHHCCCHHHHHHHHhC--C---------CCHHHHHHHHHHHHH
Confidence 467889999999988653 4332 3467889999999999999998887 1 111122222222221
Q ss_pred CCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHH
Q 023037 107 SASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYA 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~ 186 (288)
. + +.+.....++ +.+++..+. ....+-.-++.++...|+|++|..+++++.+..+ ++. .++.
T Consensus 143 ~-g-~~~~A~~~l~---~~~~~~p~~-~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p-----~~~-------~~~~ 204 (291)
T 3mkr_A 143 L-D-RLDLARKELK---KMQDQDEDA-TLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCS-----PTL-------LLLN 204 (291)
T ss_dssp T-T-CHHHHHHHHH---HHHHHCTTC-HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSC-----CCH-------HHHH
T ss_pred C-C-CHHHHHHHHH---HHHhhCcCc-HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCC-----CcH-------HHHH
Confidence 1 1 2223333333 333443222 1222222233555677999999999999998832 232 6778
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHH-HHHHHHHHh
Q 023037 187 IEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADA-ATDFFEAFK 250 (288)
Q Consensus 187 lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A-~syF~EaF~ 250 (288)
.-+.+|..+|++.+|...|.+|+..... +|... ..-|.++...|++..| ..+|-.+.+
T Consensus 205 ~la~~~~~~g~~~eA~~~l~~al~~~p~--~~~~l----~~l~~~~~~~g~~~eaa~~~~~~~~~ 263 (291)
T 3mkr_A 205 GQAACHMAQGRWEAAEGVLQEALDKDSG--HPETL----INLVVLSQHLGKPPEVTNRYLSQLKD 263 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHH----HHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHH----HHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 8889999999999999999999987532 24433 2336667777888664 566655554
No 105
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.07 E-value=0.00016 Score=57.23 Aligned_cols=134 Identities=13% Similarity=0.072 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..++.++...|+++++++++++.+... |+ .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-----------------------~~----~------------------ 41 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDAD-----------------------AF----D------------------ 41 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTT-----------------------SC----C------------------
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----------------------cc----C------------------
Confidence 46778899999999999999998887654322 11 0
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+...+|.++...|+++++..+++++.+..+ ++ .+++..-+.+|...+++.+|...+.++....
T Consensus 42 ---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 ---VDVALHLGIAYVKTGAVDRGTELLERSLADAP-----DN-------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----CC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 12345788999999999999999999988822 22 3677788999999999999999999998873
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.. +| .+...-|.++...|+|+.|..+|-++.+..
T Consensus 107 ~~--~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 140 (186)
T 3as5_A 107 PI--NF----NVRFRLGVALDNLGRFDEAIDSFKIALGLR 140 (186)
T ss_dssp TT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cH--hH----HHHHHHHHHHHHcCcHHHHHHHHHHHHhcC
Confidence 22 22 344566888999999999999999998764
No 106
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.06 E-value=7.9e-05 Score=55.83 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=87.8
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC-
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI- 215 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I- 215 (288)
.....+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|...+++.+|...|.++.......
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-----~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 72 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDP-----TN-------MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----cc-------HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccc
Confidence 3567899999999999999999999988832 12 3677788999999999999999999999987654
Q ss_pred CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 216 ~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..+...+.+...-|.+|...++|+.|..+|-++.+..
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 73 EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 3355667788888999999999999999999998854
No 107
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.06 E-value=0.00023 Score=52.95 Aligned_cols=120 Identities=18% Similarity=0.308 Sum_probs=91.5
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++++...++. ..++..++.++...|+++++..++.+.+... +
T Consensus 14 ~~~~~~A~~~~~~~~~~~~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~---------------------- 66 (136)
T 2fo7_A 14 QGDYDEAIEYYQKALELDPRS----AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-P---------------------- 66 (136)
T ss_dssp HTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-T----------------------
T ss_pred cCcHHHHHHHHHHHHHcCCcc----hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-C----------------------
Confidence 468999999999999875432 3467789999999999999999988775442 1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
+ . ..+...++.++...|+++++...++++.+..+ ++ .+++..-
T Consensus 67 ~----~---------------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~l 109 (136)
T 2fo7_A 67 R----S---------------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----RS-------AEAWYNL 109 (136)
T ss_dssp T----C---------------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHH
T ss_pred C----c---------------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----CC-------hHHHHHH
Confidence 1 0 01234578889999999999999998888722 12 2566677
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 189 IQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
+.+|...+++.+|...+..+....
T Consensus 110 a~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 110 GNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHccHHHHHHHHHHHHccC
Confidence 888999999999999999887653
No 108
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.06 E-value=6.8e-05 Score=59.07 Aligned_cols=140 Identities=9% Similarity=0.038 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|.++...|++++++.+|++.+... +.-
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~-------------------------------------------- 46 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELN-PSN-------------------------------------------- 46 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTC--------------------------------------------
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCC--------------------------------------------
Confidence 46778888899999999999988888776643 210
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+...+|.++...|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.++....
T Consensus 47 ---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 47 ---AIYYGNRSLAYLRTECYGYALGDATRAIELDK-----KY-------IKGYYRRAASNMALGKFRAALRDYETVVKVK 111 (166)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----cc-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 12334567777777777777777777777621 11 2566667777777777777777777777664
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhC
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAG 256 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g 256 (288)
.. +|... ....-|..+...++|++|...+-.+-+.++..+
T Consensus 112 p~--~~~~~--~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 151 (166)
T 1a17_A 112 PH--DKDAK--MKYQECNKIVKQKAFERAIAGDEHKRSVVDSLD 151 (166)
T ss_dssp TT--CHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CC--CHHHH--HHHHHHHHHHHHHHHHHHHHcccchHHHhcccc
Confidence 32 23322 223334555667777777777777766666544
No 109
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.06 E-value=0.00017 Score=66.01 Aligned_cols=151 Identities=12% Similarity=0.173 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++.++|.+|.++|++++|+++|++.+.+. +.... ... + ++....
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-p~~~~----------------~~~----------~------~~~~~~ 192 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWL-EYESS----------------FSN----------E------EAQKAQ 192 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCCC----------------CCS----------H------HHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh-hcccc----------------CCh----------H------HHHHHH
Confidence 46788999999999999999999999999887 54211 000 0 011122
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+..++|.+|+..|+|++|...++++.+..+ ++ ..++..-+.+|..++++.+|...|.+|+.+.
T Consensus 193 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 193 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS-----NN-------EKGLSRRGEAHLAVNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----Cc-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 33346788999999999999999999999999822 12 3678888999999999999999999999885
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHH-HHHHHHHHhhhhh
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADA-ATDFFEAFKNYDE 254 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A-~syF~EaF~~y~e 254 (288)
..- + .+...-|.++...++++.| ...|-..|..+.+
T Consensus 261 P~~--~----~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 261 PNN--K----AAKTQLAVCQQRIRRQLAREKKLYANMFERLAE 297 (336)
T ss_dssp SSC--H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC--H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 422 2 3445567888888999888 4455555655543
No 110
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.00 E-value=0.00014 Score=59.44 Aligned_cols=155 Identities=9% Similarity=0.045 Sum_probs=104.0
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|+..|++++..+|+. ..++..++.++...|+++++++.+++.+..- + -+. ... +...+......
T Consensus 18 ~~g~~~~A~~~~~~al~~~P~~----~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~-p-~~~--~~~-~~~~~~~~~~~ 88 (176)
T 2r5s_A 18 QQGEHAQALNVIQTLSDELQSR----GDVKLAKADCLLETKQFELAQELLATIPLEY-Q-DNS--YKS-LIAKLELHQQA 88 (176)
T ss_dssp HTTCHHHHHHHHHTSCHHHHTS----HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG-C-CHH--HHH-HHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCc----HHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc-C-ChH--HHH-HHHHHHHHhhc
Confidence 4689999999999999876543 3567899999999999999999999876554 3 111 111 11111111100
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.. . .. .....+.++-.. ........+|.++...|++++|...++++.+.-+.. .+. +++..
T Consensus 89 ~~--~-~a---~~~~~~al~~~P---~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~---~~~-------~a~~~ 149 (176)
T 2r5s_A 89 AE--S-PE---LKRLEQELAANP---DNFELACELAVQYNQVGRDEEALELLWNILKVNLGA---QDG-------EVKKT 149 (176)
T ss_dssp TS--C-HH---HHHHHHHHHHST---TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT---TTT-------HHHHH
T ss_pred cc--c-hH---HHHHHHHHHhCC---CCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc---ChH-------HHHHH
Confidence 00 0 11 122222222221 224667889999999999999999999998873322 122 45666
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~ 210 (288)
-+.+|..+|+...|...|.+++.
T Consensus 150 l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 150 FMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcHHHHHHHHHH
Confidence 78899999999999999998864
No 111
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.99 E-value=0.00014 Score=56.97 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=86.0
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
...++|+.|+..|+|++|...+++..+..+ ++ .+++..-+.+|..+|++.+|...|.+|+.+...-
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-- 80 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDP-----EN-------AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF-- 80 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh--
Confidence 345789999999999999999999988822 22 3788889999999999999999999999874332
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhH
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLK 265 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LK 265 (288)
| .....-|.+|...|+|+.|..+|-.+.+. ..+++.+...|.
T Consensus 81 ~----~a~~~lg~~~~~~~~~~~A~~~~~~al~l--~P~~~~a~~~l~ 122 (126)
T 4gco_A 81 I----KGYIRKAACLVAMREWSKAQRAYEDALQV--DPSNEEAREGVR 122 (126)
T ss_dssp H----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHH
T ss_pred h----HHHHHHHHHHHHCCCHHHHHHHHHHHHHH--CcCCHHHHHHHH
Confidence 2 23456789999999999999999999885 245566555443
No 112
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.98 E-value=0.0014 Score=62.28 Aligned_cols=92 Identities=14% Similarity=0.099 Sum_probs=50.2
Q ss_pred HhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhh-----cCHHHHHHHHHH
Q 023037 137 KTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTET-----KNNKKLKQLYQK 207 (288)
Q Consensus 137 ~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~-----~n~~kak~~y~~ 207 (288)
....+|+.+|.. .++++++...+++.-+. ++. +.+..-+.+|... +|+.+|...|.+
T Consensus 256 ~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~-------~~~-------~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~ 321 (490)
T 2xm6_A 256 IAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ-------GNS-------DGQYYLAHLYDKGAEGVAKNREQAISWYTK 321 (490)
T ss_dssp HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT-------TCH-------HHHHHHHHHHHHCBTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc-------CCH-------HHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 455667777776 67777777777666443 222 3444445566655 677777777777
Q ss_pred HHhhhccCCChhHHHHHHhhcchhhhh---hccHHHHHHHHHHHHh
Q 023037 208 ALAIKSAIPHPRIMGIIRECGGKMHMA---ERQWADAATDFFEAFK 250 (288)
Q Consensus 208 A~~~a~~I~~p~i~a~I~~~~G~l~~~---ekdy~~A~syF~EaF~ 250 (288)
|.... +|..+ ..-|.+|.. .+|+++|..+|-.|.+
T Consensus 322 a~~~~----~~~a~----~~lg~~y~~~g~~~~~~~A~~~~~~a~~ 359 (490)
T 2xm6_A 322 SAEQG----DATAQ----ANLGAIYFRLGSEEEHKKAVEWFRKAAA 359 (490)
T ss_dssp HHHTT----CHHHH----HHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHhcC----CHHHH----HHHHHHHHhCCCcccHHHHHHHHHHHHH
Confidence 65542 22111 112333332 3366666666666554
No 113
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.98 E-value=0.00012 Score=61.71 Aligned_cols=170 Identities=13% Similarity=0.091 Sum_probs=101.5
Q ss_pred CCCCHHHHHHHHHHhhcCCccchh-hH-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAE-WG-----------FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEK 95 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~-~~-----------~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k 95 (288)
..+++++|++.|++++..+|+... |. .....++|.+|.+.|+++++++.|++.+..- |.-.......
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l 94 (208)
T 3urz_A 16 EAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA-PNNVDCLEAC 94 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHH
Confidence 468999999999999998774322 11 1122339999999999999999999999887 6533322221
Q ss_pred HHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhH--HHHHHHHHHHhccCCCCCc
Q 023037 96 CINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGR--MSKILKELHKSCQREDGTD 173 (288)
Q Consensus 96 ~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~--~~~ll~elkk~~~~~~~~d 173 (288)
+ ..+... .+.+.....|+.+++ -.. .......++|.+|+..|+... +....+.+. .+ +
T Consensus 95 g-----~~~~~~--g~~~~A~~~~~~al~---~~P---~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~----~~---~ 154 (208)
T 3urz_A 95 A-----EMQVCR--GQEKDALRMYEKILQ---LEA---DNLAANIFLGNYYYLTAEQEKKKLETDYKKLS----SP---T 154 (208)
T ss_dssp H-----HHHHHH--TCHHHHHHHHHHHHH---HCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC---C
T ss_pred H-----HHHHHc--CCHHHHHHHHHHHHH---cCC---CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh----CC---C
Confidence 1 111111 123334444444333 222 223567789999988776543 343333332 11 1
Q ss_pred cccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHH
Q 023037 174 DQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 224 (288)
Q Consensus 174 Dk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I 224 (288)
.. . ..+..-+..+..++++.+|...|.+|+.+...-.....++.|
T Consensus 155 ~~---~---~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~~~~~l~~i 199 (208)
T 3urz_A 155 KM---Q---YARYRDGLSKLFTTRYEKARNSLQKVILRFPSTEAQKTLDKI 199 (208)
T ss_dssp HH---H---HHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHHHHHHHHHH
T ss_pred ch---h---HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 11 1 123344667777899999999999999876543223444444
No 114
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.97 E-value=0.00048 Score=55.16 Aligned_cols=119 Identities=15% Similarity=0.175 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++++.|..+++.|++++|+++|++.+.++ +.... . ..+. +. +|....
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~-~~~~~-------------~-~~~~-~~--------------~~~~~~ 59 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRL-DTLIL-------------R-EKPG-EP--------------EWVELD 59 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHHH-------------T-SCTT-SH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHhcc-------------c-CCCC-HH--------------HHHHHH
Confidence 47889999999999999999999999999988 43211 0 1121 00 112223
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+..++|..|+..|+|.+|...++++.++ +.. -...|..-+.+|..+|++.+|...|.+|+.+.
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~-------~p~-----~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKR-------EET-----NEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------STT-----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc-------CCc-----chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 444567889999999999999999999999998 211 13688889999999999999999999999885
Q ss_pred c
Q 023037 213 S 213 (288)
Q Consensus 213 ~ 213 (288)
.
T Consensus 128 p 128 (162)
T 3rkv_A 128 P 128 (162)
T ss_dssp G
T ss_pred C
Confidence 3
No 115
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.95 E-value=0.00026 Score=53.68 Aligned_cols=122 Identities=7% Similarity=-0.034 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhh
Q 023037 56 ALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLW 135 (288)
Q Consensus 56 al~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~ 135 (288)
++.++|..+...|+++++.+.+++.+... +. ....
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-p~--------------------------------------------~~~~ 38 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELY-PN--------------------------------------------GVYT 38 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SS--------------------------------------------STTH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHC-CC--------------------------------------------Cccc
Confidence 46789999999999999999998776544 21 0011
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I 215 (288)
......+|.+|+..|+|++|...++++.+..+ ++ ....+++..-+.+|..+|++.+|...|.++......-
T Consensus 39 ~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p-----~~----~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 39 PNALYWLGESYYATRNFQLAEAQFRDLVSRYP-----TH----DKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TS----TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC-----CC----cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 13456789999999999999999999988732 11 3356788888999999999999999999998875433
Q ss_pred CC-hhHHHHHHhhcchh
Q 023037 216 PH-PRIMGIIRECGGKM 231 (288)
Q Consensus 216 ~~-p~i~a~I~~~~G~l 231 (288)
+. +.....+....|.+
T Consensus 110 ~~~~~a~~~l~~l~~~~ 126 (129)
T 2xev_A 110 DAARVAQERLQSIRLGQ 126 (129)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred hHHHHHHHHHHHHHhhh
Confidence 33 55556666655543
No 116
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.94 E-value=0.00023 Score=55.72 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++++.|..|+++|++++|+++|++.+..- |.-
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~-------------------------------------------- 46 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PEN-------------------------------------------- 46 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC--------------------------------------------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCC--------------------------------------------
Confidence 35677899999999999999999999887654 220
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+..++|.+|+..|+|++|...++++.++ +.. -.+.|..-+.+|..+|++.+|...|.+|+.+.
T Consensus 47 ---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-------~p~-----~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 47 ---AILYSNRAACLTKLMEFQRALDDCDTCIRL-------DSK-----FIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTT-----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHhhHHHhhccHHHHHHHHHHHHHh-------hhh-----hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 123456788899999999999988888887 222 13678888999999999999999999998874
No 117
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.91 E-value=0.00031 Score=56.36 Aligned_cols=118 Identities=13% Similarity=0.150 Sum_probs=89.5
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....||.+|++.|+|++|.+.++++.+.-+ ++ .++|..-+.+|..++++.+|...|.+|+.+...-
T Consensus 32 ~~~~~la~~y~~~~~~~~A~~~~~~al~~~p-----~~-------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~- 98 (150)
T 4ga2_A 32 IKGFYFAKLYYEAKEYDLAKKYICTYINVQE-----RD-------PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ- 98 (150)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC-
Confidence 4557899999999999999999999999822 23 3789999999999999999999999999875322
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHH-HHHhhhhhhCChhHHHHhHHHHHHHHhcCCCCC
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFF-EAFKNYDEAGNQRRIQCLKYLVLANMLMESEVN 279 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~-EaF~~y~e~g~~~a~~~LKY~~L~~il~~~~~d 279 (288)
| .....-|.++...+++..|..+|+ .|.+.. .++|.. |.+.+.|+.....|
T Consensus 99 -~----~~~~~la~~~~~~~~~~~aa~~~~~~al~l~--P~~~~~-----~~l~~~ll~~~G~d 150 (150)
T 4ga2_A 99 -K----DLVLKIAELLCKNDVTDGRAKYWVERAAKLF--PGSPAV-----YKLKEQLLDCEGED 150 (150)
T ss_dssp -H----HHHHHHHHHHHHHCSSSSHHHHHHHHHHHHS--TTCHHH-----HHHHHHHHHTCCCC
T ss_pred -H----HHHHHHHHHHHHcCChHHHHHHHHHHHHHhC--cCCHHH-----HHHHHHHHHHhCcC
Confidence 2 233455888999999988877765 566643 345554 55677777655443
No 118
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.00058 Score=52.03 Aligned_cols=116 Identities=13% Similarity=0.053 Sum_probs=90.1
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
....+|..++..|+|++|...+++..+..+ ++ .+++..-+.+|..++++.+|...|.+|+.+...-
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-- 71 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAP-----ED-------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-- 71 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----CC-------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc--
Confidence 456789999999999999999999998832 22 3788889999999999999999999999875322
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhC-ChhHHHHhHHHHHHH
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAG-NQRRIQCLKYLVLAN 271 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g-~~~a~~~LKY~~L~~ 271 (288)
+.....-|.+++..|+|+.|..+|-++.+..-+.+ .|.-..++..+-.|.
T Consensus 72 ----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 72 ----VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 23455668999999999999999999998764432 254455555444443
No 119
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.87 E-value=0.00031 Score=62.52 Aligned_cols=156 Identities=8% Similarity=0.004 Sum_probs=105.9
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++++..+++. ..++..++.++..+|++++|.+++++.+..- +. .....+...+......
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~----~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~-p~----~~~~~~~~~~~l~~~~ 199 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQN----GEIGLLLAETLIALNRSEDAEAVLXTIPLQD-QD----TRYQGLVAQIELLXQA 199 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSC----HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG-CS----HHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcc----hhHHHHHHHHHHHCCCHHHHHHHHHhCchhh-cc----hHHHHHHHHHHHHhhc
Confidence 5789999999999999987653 3578899999999999999999999886554 32 1122222222222111
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.. +.....+ .+.++-. -........||.+|...|++++|...++++.+.-+.. ++ .+++..
T Consensus 200 ~~---~~a~~~l---~~al~~~---P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~---~~-------~~a~~~ 260 (287)
T 3qou_A 200 AD---TPEIQQL---QQQVAEN---PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA---AD-------GQTRXT 260 (287)
T ss_dssp TS---CHHHHHH---HHHHHHC---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG---GG-------GHHHHH
T ss_pred cc---CccHHHH---HHHHhcC---CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc---cc-------chHHHH
Confidence 11 0112222 2222211 2233567899999999999999999999999882221 11 266777
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 188 EIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
-+.+|..+|+...+...|++++..
T Consensus 261 l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 261 FQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCcHHHHHHHHHHH
Confidence 788899999999999999988754
No 120
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.87 E-value=0.00029 Score=52.61 Aligned_cols=107 Identities=15% Similarity=0.229 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++..+|.++...|+++++..++++.+... +. .
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~--------------------------~------------------- 37 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD-PT--------------------------N------------------- 37 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT--------------------------C-------------------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-Cc--------------------------c-------------------
Confidence 5678899999999999999999998886653 21 0
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
..+...+|.+|...|+|+++...++++.+..+..+ ++. ..+.+++..-+.+|..++++.+|...|.+++....
T Consensus 38 --~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~--~~~---~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 38 --MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR--EDY---RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp --HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST--TCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccc--hhH---HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 12346789999999999999999999988854321 222 44578899999999999999999999999998753
No 121
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.86 E-value=0.00076 Score=54.06 Aligned_cols=113 Identities=11% Similarity=0.029 Sum_probs=86.0
Q ss_pred HHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHH
Q 023037 38 GFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLRE 117 (288)
Q Consensus 38 ~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~ 117 (288)
.|++++..+++ ...++..+|.++..+|++++++++|++.+..- + +
T Consensus 9 ~~~~al~~~p~----~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p----------------------~-------- 53 (148)
T 2vgx_A 9 TIAMLNEISSD----TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-H----------------------Y-------- 53 (148)
T ss_dssp SHHHHTTCCHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-T----------------------T--------
T ss_pred hHHHHHcCCHh----hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-c----------------------c--------
Confidence 46667766543 24567889999999999999999998776543 2 1
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcC
Q 023037 118 FYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKN 197 (288)
Q Consensus 118 ~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n 197 (288)
+.. ....+|.+|...|+|++|...++++.+..+ ++. +++..-+.+|..+|+
T Consensus 54 -------------~~~----~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-----~~~-------~~~~~lg~~~~~~g~ 104 (148)
T 2vgx_A 54 -------------DSR----FFLGLGACRQAMGQYDLAIHSYSYGAVMDI-----XEP-------RFPFHAAECLLQXGE 104 (148)
T ss_dssp -------------CHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCT-------HHHHHHHHHHHHTTC
T ss_pred -------------cHH----HHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CCc-------hHHHHHHHHHHHcCC
Confidence 111 224688899999999999999999988832 232 567777899999999
Q ss_pred HHHHHHHHHHHHhhhcc
Q 023037 198 NKKLKQLYQKALAIKSA 214 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~~ 214 (288)
+.+|...|.+++.+...
T Consensus 105 ~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 105 LAEAESGLFLAQELIAN 121 (148)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCcC
Confidence 99999999999888764
No 122
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.83 E-value=0.0009 Score=50.94 Aligned_cols=100 Identities=9% Similarity=0.049 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++.++|..+.+.|++++++++|++.+..- +.-
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~--------------------------------------------- 37 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PED--------------------------------------------- 37 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC---------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCC---------------------------------------------
Confidence 4678899999999999999999998887654 220
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
..+..++|.+|+..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++.+..
T Consensus 38 --~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 103 (126)
T 3upv_A 38 --ARGYSNRAAALAKLMSFPEAIADCNKAIEKDP-----NF-------VRAYIRKATAQIAVKEYASALETLDAARTKDA 103 (126)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-----Cc-------HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCc
Confidence 13456789999999999999999999998821 12 46788889999999999999999999998873
No 123
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.83 E-value=0.00045 Score=51.97 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=81.5
Q ss_pred hHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc
Q 023037 135 WFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA 214 (288)
Q Consensus 135 ~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~ 214 (288)
.......+|..++..|+|++|..+++++.+..+ ++ .+++..-+.+|...+++.+|...+.++......
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~-----~~-------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 82 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNP-----KD-------AKLYSNRAACYTKLLEFQLALKDCEECIQLEPT 82 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCT-----TC-------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----Cc-------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 345667899999999999999999999987721 12 477888899999999999999999999987432
Q ss_pred CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 215 IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 215 I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+| .+...-|.++...++|+.|..+|-++.+..
T Consensus 83 --~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 83 --FI----KGYTRKAAALEAMKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp --CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred --ch----HHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 22 344566888999999999999999998754
No 124
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.81 E-value=0.00045 Score=55.44 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=86.8
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
........+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+|+.+..
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 76 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP-----AN-------PIYLSNRAAAYSASGQHEKAAEDAELATVVDP 76 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----cC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 3445677899999999999999999999999832 12 37888889999999999999999999998853
Q ss_pred cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCC
Q 023037 214 AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGN 257 (288)
Q Consensus 214 ~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~ 257 (288)
.- ......-|.+|...++|+.|..+|-++.+......+
T Consensus 77 ~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 77 KY------SKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp TC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred CC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 32 334556689999999999999999999987654443
No 125
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.79 E-value=0.00035 Score=57.07 Aligned_cols=99 Identities=13% Similarity=0.090 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++..+|.++.++|++++++++|++.+..- |. +.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-P~-------------------------------------------~~- 70 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD-FY-------------------------------------------NV- 70 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT-------------------------------------------CH-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC-------------------------------------------CH-
Confidence 5688999999999999999999999887665 32 11
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....||.+|...|+|++|...+++..++.+ ++. +++..-+.+|..+|++.+|...|.+|+.+.
T Consensus 71 ---~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P-----~~~-------~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 71 ---DYIMGLAAIYQIKEQFQQAADLYAVAFALGK-----NDY-------TPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS-----SCC-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHccHHHHHHHHHHHHhhCC-----CCc-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 1335689999999999999999999999833 333 678888999999999999999999999876
No 126
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.79 E-value=0.00096 Score=49.54 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=81.8
Q ss_pred hHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc
Q 023037 135 WFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA 214 (288)
Q Consensus 135 ~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~ 214 (288)
.......+|..+...|+|++|...++++.+..+ ++ .+++..-+.+|...+++.+|...+.++......
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 78 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNP-----AN-------AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA 78 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-----CC-------HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc
Confidence 345677899999999999999999999988722 12 367888899999999999999999999886321
Q ss_pred CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 215 IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 215 I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+ ..+...-|.++...++|+.|..+|-++.+..
T Consensus 79 --~----~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 79 --Y----SKAYGRMGLALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp --C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred --C----HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 1 2345667889999999999999999998863
No 127
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.78 E-value=0.00048 Score=52.73 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=83.6
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++.+...
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-- 75 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNP-----LV-------AVYYTNRALCYLKMQQPEQALADCRRALELDGQ-- 75 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc-----Cc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch--
Confidence 4567899999999999999999999988822 12 378888899999999999999999999987533
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
+| .....-|.++...++|+.|..+|-++.+....
T Consensus 76 ~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 76 SV----KAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hH----HHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 12 34556788999999999999999999987765
No 128
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.77 E-value=0.0023 Score=60.08 Aligned_cols=184 Identities=9% Similarity=0.096 Sum_probs=122.8
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGK-YKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~-~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
.+++++|++.|.+++..+++. ..++.++|.++...|+ +++++++|++.+..- +.-.....-... ++...+.
T Consensus 110 ~g~~~~Al~~~~~al~l~P~~----~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~-P~~~~a~~~~g~--~~~~~g~- 181 (382)
T 2h6f_A 110 DERSERAFKLTRDAIELNAAN----YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRRV--LVEWLRD- 181 (382)
T ss_dssp TCCCHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHHH--HHHHHTC-
T ss_pred CCChHHHHHHHHHHHHhCccC----HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC-CCCHHHHHHHHH--HHHHccC-
Confidence 567899999999999987653 3567899999999997 999999999999887 654443333322 2333332
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
.+.....++.+++. +-.......+++.++...|+|+++...++++.+.-+ ++ .+++..
T Consensus 182 ----~~eAl~~~~kal~l------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P-----~~-------~~a~~~ 239 (382)
T 2h6f_A 182 ----PSQELEFIADILNQ------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDV-----RN-------NSVWNQ 239 (382)
T ss_dssp ----CTTHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT-----TC-------HHHHHH
T ss_pred ----HHHHHHHHHHHHHh------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-----CC-------HHHHHH
Confidence 33444455544442 223345667899999999999999999999998821 22 266777
Q ss_pred HHHHHHhh-cCHHHH-----HHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhc--cHHHHHHHHHHH
Q 023037 188 EIQMYTET-KNNKKL-----KQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAER--QWADAATDFFEA 248 (288)
Q Consensus 188 E~~~y~~~-~n~~ka-----k~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ek--dy~~A~syF~Ea 248 (288)
-+.+|..+ +...+| ...|.+|+.+.-. -...-...+ .++...+ +|..|...+-+.
T Consensus 240 lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~-----~~~a~~~l~-~ll~~~g~~~~~~a~~~~~~~ 302 (382)
T 2h6f_A 240 RYFVISNTTGYNDRAVLEREVQYTLEMIKLVPH-----NESAWNYLK-GILQDRGLSKYPNLLNQLLDL 302 (382)
T ss_dssp HHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTT-----CHHHHHHHH-HHHTTTCGGGCHHHHHHHHHH
T ss_pred HHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCC-----CHHHHHHHH-HHHHccCccchHHHHHHHHHh
Confidence 78888884 444777 4788888876532 222222222 2233333 788887766544
No 129
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.77 E-value=0.00069 Score=56.05 Aligned_cols=140 Identities=12% Similarity=0.071 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|..+...|++++++++|++.+... +.-+.. .. . .+. ....
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~----------------~~----~----------~~~-~~~~ 84 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFF-IHTEEW----------------DD----Q----------ILL-DKKK 84 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-TTCTTC----------------CC----H----------HHH-HHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hccccc----------------ch----h----------hHH-HHHH
Confidence 46788899999999999999999999998876 431100 00 0 000 0012
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.+...+..++|.+|+..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++.+.
T Consensus 85 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK-----NN-------VKALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-----cc-------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 22346778999999999999999999999998821 12 3678888999999999999999999999885
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHH
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAA 242 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~ 242 (288)
..- |.+ ...-|.++...+++..+.
T Consensus 153 p~~--~~~----~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 153 PNN--LDI----RNSYELCVNKLKEARKKD 176 (198)
T ss_dssp TTC--HHH----HHHHHHHHHHHHHHHC--
T ss_pred CCc--HHH----HHHHHHHHHHHHHHHHHH
Confidence 322 332 233344555555555555
No 130
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.75 E-value=0.00064 Score=64.90 Aligned_cols=144 Identities=12% Similarity=0.150 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...+++++|..++++|+|++|+.+|++.+.+. +..+. ..+ . ++....
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~-p~~~~----------------~~~----~------------~~~~~~ 313 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL-EMEYG----------------LSE----K------------ESKASE 313 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TTCCS----------------CCH----H------------HHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-ccccc----------------CCh----H------------HHHHHH
Confidence 46788999999999999999999999999887 54211 000 0 011123
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+..++|..|+..|+|++|...++++.++ +.. -...+..-+.+|..++++.+|...|.+|+.+.
T Consensus 314 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~-------~p~-----~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 314 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGL-------DSA-----NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------STT-----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-------CCc-----cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 344578889999999999999999999999998 222 14778888999999999999999999999875
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHH
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFE 247 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~E 247 (288)
..-. .+...-|.++...++++.|....+.
T Consensus 382 P~~~------~a~~~l~~~~~~~~~~~~a~~~~~~ 410 (457)
T 1kt0_A 382 PQNK------AARLQISMCQKKAKEHNERDRRIYA 410 (457)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4222 2344456777778888877765544
No 131
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.75 E-value=0.00016 Score=69.47 Aligned_cols=106 Identities=10% Similarity=0.048 Sum_probs=83.7
Q ss_pred CCCCHHHHHHHHHHhhcCCc-----cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEP-----EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMD 102 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~-----e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild 102 (288)
..+++++|+..|+++++... ++.. ...++.+|+.+|..+|+|++|..++++.+...+..
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~--------------- 373 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVY-MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKH--------------- 373 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---------------
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchH-HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH---------------
Confidence 35689999999999998632 3444 78999999999999999999999999999988332
Q ss_pred HhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcc
Q 023037 103 FVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDD 174 (288)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dD 174 (288)
++. +.--+.....|||.+|..+|+|++|..++++..++....=|.|.
T Consensus 374 -lG~------------------------~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~H 420 (433)
T 3qww_A 374 -YPV------------------------YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDH 420 (433)
T ss_dssp -SCS------------------------SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred -cCC------------------------CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 331 12334456779999999999999999999999998665544333
No 132
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.73 E-value=0.00092 Score=64.80 Aligned_cols=126 Identities=12% Similarity=0.051 Sum_probs=95.7
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++.++.+++. ..++..+|.+|..+|++++++++|++.+... +.-
T Consensus 36 ~g~~~~A~~~~~~al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~-------------------- 90 (568)
T 2vsy_A 36 MGDTTAGEMAVQRGLALHPGH----PEAVARLGRVRWTQQRHAEAAVLLQQASDAA-PEH-------------------- 90 (568)
T ss_dssp HTCHHHHHHHHHHHHTTSTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC--------------------
T ss_pred cCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCC--------------------
Confidence 478999999999999987643 3577899999999999999999999887654 220
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
.....++|.+|...|++++|...+++..+..+ ++ .+++..-
T Consensus 91 ---------------------------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~l 131 (568)
T 2vsy_A 91 ---------------------------PGIALWLGHALEDAGQAEAAAAAYTRAHQLLP-----EE-------PYITAQL 131 (568)
T ss_dssp ---------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHH
T ss_pred ---------------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------HHHHHHH
Confidence 11235678888888888888888888877722 12 2566667
Q ss_pred HHHHHhh---cCHHHHHHHHHHHHhhhccCCCh
Q 023037 189 IQMYTET---KNNKKLKQLYQKALAIKSAIPHP 218 (288)
Q Consensus 189 ~~~y~~~---~n~~kak~~y~~A~~~a~~I~~p 218 (288)
+.+|..+ +++.+|.+.|.+++.....-..|
T Consensus 132 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 164 (568)
T 2vsy_A 132 LNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEP 164 (568)
T ss_dssp HHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCH
T ss_pred HHHHHHhhccccHHHHHHHHHHHHhcCCcccCh
Confidence 7778888 88888888888888777665444
No 133
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.73 E-value=0.0025 Score=56.67 Aligned_cols=192 Identities=13% Similarity=0.086 Sum_probs=122.5
Q ss_pred HHHHHHHHHHhhc-CCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCc
Q 023037 32 PEGALAGFAEVVA-MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQ 110 (288)
Q Consensus 32 ~~~Al~~f~~ii~-~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~ 110 (288)
+++|++.|++.+. ..++.. .+...++.++...|+++++.+.|++.+..- +.-.. .+..+........ .
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~----~~~~~~~~~~~~~--~ 148 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNM----LLYFAYADYEESRMKYEKVHSIYNRLLAIE-DIDPT----LVYIQYMKFARRA--E 148 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSS-SSCTH----HHHHHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHhCcccH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhcc-ccCcc----HHHHHHHHHHHHh--c
Confidence 3899999999999 566432 355788999999999999999999998754 32111 1222222111110 1
Q ss_pred chhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHh-hhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHH
Q 023037 111 NFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWF-DMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEI 189 (288)
Q Consensus 111 ~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl-~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~ 189 (288)
+.+.....++.++ +-.. ....+.+..+.+.. ..|++++|..++++..+..+ ++ .+++..-+
T Consensus 149 ~~~~A~~~~~~a~---~~~p---~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~~~ 210 (308)
T 2ond_A 149 GIKSGRMIFKKAR---EDAR---TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG-----DI-------PEYVLAYI 210 (308)
T ss_dssp CHHHHHHHHHHHH---TSTT---CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHT-----TC-------HHHHHHHH
T ss_pred CHHHHHHHHHHHH---hcCC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----Cc-------HHHHHHHH
Confidence 1222223333222 2111 11233334444433 27999999999999988843 22 25666667
Q ss_pred HHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 190 QMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 190 ~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
.++..+|++.+|+.+|.+|+.... ..|.-...+-..-|.+....|+++.|...+-.+.+.+-+
T Consensus 211 ~~~~~~g~~~~A~~~~~~al~~~~--l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~ 273 (308)
T 2ond_A 211 DYLSHLNEDNNTRVLFERVLTSGS--LPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 273 (308)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHSSS--SCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHCCCHHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccc
Confidence 888899999999999999987421 113222334444455667789999999999999988764
No 134
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.73 E-value=0.00046 Score=56.30 Aligned_cols=99 Identities=10% Similarity=0.025 Sum_probs=83.3
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|..++..|+|++|...++++.+.-+ ++. +.+..-+.+|..++++.+|...|.+|..+...-
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P-----~~~-------~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~- 103 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDF-----YNV-------DYIMGLAAIYQIKEQFQQAADLYAVAFALGKND- 103 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCH-------HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC-
Confidence 4667899999999999999999999998822 233 678888999999999999999999999987653
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
|. ....-|.++...|+|+.|..+|-.+.+...
T Consensus 104 -~~----~~~~lg~~~~~lg~~~eA~~~~~~al~l~~ 135 (151)
T 3gyz_A 104 -YT----PVFHTGQCQLRLKAPLKAKECFELVIQHSN 135 (151)
T ss_dssp -CH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred -cH----HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 32 334568889999999999999999998763
No 135
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.72 E-value=0.00067 Score=61.97 Aligned_cols=123 Identities=9% Similarity=0.077 Sum_probs=96.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccc-----------hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEK-----------AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKC 96 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~-----------~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~ 96 (288)
..+++++|++.|++.+...++. ......++.+++.+|.++|++++|+++|++.+..- +.-
T Consensus 159 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~-------- 229 (336)
T 1p5q_A 159 KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD-SNN-------- 229 (336)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC--------
T ss_pred HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCc--------
Confidence 4689999999999999876532 22335889999999999999999999999887654 220
Q ss_pred HHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccc
Q 023037 97 INNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK 176 (288)
Q Consensus 97 i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~ 176 (288)
.....++|.+|...|+|++|...++++.+..+ ++.
T Consensus 230 ---------------------------------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-----~~~- 264 (336)
T 1p5q_A 230 ---------------------------------------EKGLSRRGEAHLAVNDFELARADFQKVLQLYP-----NNK- 264 (336)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----SCH-
T ss_pred ---------------------------------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-----CCH-
Confidence 12446789999999999999999999999832 222
Q ss_pred ccchHHHHHHHHHHHHHhhcCHHHH-HHHHHHHHh
Q 023037 177 KGSQLLEVYAIEIQMYTETKNNKKL-KQLYQKALA 210 (288)
Q Consensus 177 ~~~~llEv~~lE~~~y~~~~n~~ka-k~~y~~A~~ 210 (288)
+++..-..++..++++.++ +..|.+...
T Consensus 265 ------~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 265 ------AAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5777778889999998888 666666653
No 136
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.71 E-value=0.0014 Score=51.44 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=88.0
Q ss_pred HHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHH
Q 023037 38 GFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLRE 117 (288)
Q Consensus 38 ~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~ 117 (288)
.|++++..+++ ...++..++..+...|++++++++|++.+..- |.
T Consensus 6 ~l~~al~~~p~----~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~------------------------------ 50 (142)
T 2xcb_A 6 TLAMLRGLSED----TLEQLYALGFNQYQAGKWDDAQKIFQALCMLD-HY------------------------------ 50 (142)
T ss_dssp ---CCTTCCHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT------------------------------
T ss_pred hHHHHHcCCHH----HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-Cc------------------------------
Confidence 45556655543 24567889999999999999999998776543 21
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcC
Q 023037 118 FYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKN 197 (288)
Q Consensus 118 ~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n 197 (288)
+. .....+|.+|...|+|++|...++++.+..+ ++. +++..-+.+|..+|+
T Consensus 51 -------------~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~~-------~~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 51 -------------DA----RYFLGLGACRQSLGLYEQALQSYSYGALMDI-----NEP-------RFPFHAAECHLQLGD 101 (142)
T ss_dssp -------------CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TCT-------HHHHHHHHHHHHTTC
T ss_pred -------------cH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-----CCc-------HHHHHHHHHHHHcCC
Confidence 11 1234688899999999999999999988832 233 567778899999999
Q ss_pred HHHHHHHHHHHHhhhccCCC-hhHHHHH
Q 023037 198 NKKLKQLYQKALAIKSAIPH-PRIMGII 224 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~~I~~-p~i~a~I 224 (288)
+.+|...|.+++.+...-+. +.+...+
T Consensus 102 ~~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 102 LDGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 99999999999988764333 3333333
No 137
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.71 E-value=0.0018 Score=51.86 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|.++...|++++++++|++.+... +.-
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~-------------------------------------------- 44 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIA-PAN-------------------------------------------- 44 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTC--------------------------------------------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcC--------------------------------------------
Confidence 46788999999999999999999999887665 220
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+..++|.+|+..|+|++|...++++.+. +.. -.+++..-+.+|..++++.+|...|.+++.+.
T Consensus 45 ---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------~p~-----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 45 ---PIYLSNRAAAYSASGQHEKAAEDAELATVV-------DPK-----YSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------CTT-----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------CCC-----CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 124467888999999999999999998888 221 14778888999999999999999999998887
Q ss_pred ccCCC
Q 023037 213 SAIPH 217 (288)
Q Consensus 213 ~~I~~ 217 (288)
..-..
T Consensus 110 p~~~~ 114 (164)
T 3sz7_A 110 GNGGS 114 (164)
T ss_dssp SSSCC
T ss_pred CCchH
Confidence 65444
No 138
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.70 E-value=0.00078 Score=51.71 Aligned_cols=104 Identities=10% Similarity=0.127 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..++..+...|++++++++|++.+... +. .
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~--------------------------~------------------ 61 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLD-AT--------------------------P------------------ 61 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC-CC--------------------------H------------------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc-cc--------------------------c------------------
Confidence 35778899999999999999999998876544 21 0
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+..++|.+|...|+|+++...++++.+. +.. . .+++..-+.+|..++++.+|...|.+++.+.
T Consensus 62 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------~~~---~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 62 QDQAVLHRNRAACHLKLEDYDKAETEASKAIEK-------DGG---D--VKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------TSC---C--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh-------Ccc---C--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 012245667899999999999999999998887 221 1 4677888899999999999999999998775
Q ss_pred c
Q 023037 213 S 213 (288)
Q Consensus 213 ~ 213 (288)
.
T Consensus 130 p 130 (148)
T 2dba_A 130 P 130 (148)
T ss_dssp S
T ss_pred C
Confidence 3
No 139
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.68 E-value=0.00049 Score=65.86 Aligned_cols=106 Identities=14% Similarity=0.132 Sum_probs=84.4
Q ss_pred CCCHHHHHHHHHHhhcCCc----cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh
Q 023037 29 ETDPEGALAGFAEVVAMEP----EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 104 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~----e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~ 104 (288)
.+++++|++.++++++... +.--....++.+|+.+|..+|++++|..++++++...+.. +
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~----------------l 363 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIF----------------F 363 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH----------------S
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHH----------------c
Confidence 4588999999999998743 2333579999999999999999999999999999988332 2
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcc
Q 023037 105 SGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDD 174 (288)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dD 174 (288)
+. +...+.....+||.+|..+|+|++|..++++..++....=|.|.
T Consensus 364 g~------------------------~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~H 409 (429)
T 3qwp_A 364 PG------------------------SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREH 409 (429)
T ss_dssp CS------------------------SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred CC------------------------CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 21 22334556789999999999999999999999998766554443
No 140
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.68 E-value=0.0014 Score=51.32 Aligned_cols=100 Identities=12% Similarity=0.016 Sum_probs=81.8
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I 215 (288)
......+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.++......
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~- 79 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNP-----SN-------AIYYGNRSLAYLRTECYGYALGDATRAIELDKK- 79 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-----CC-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-
Confidence 35667899999999999999999999988722 12 477888899999999999999999999987432
Q ss_pred CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 216 ~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
+| .....-|.++...|+|+.|..+|-++.+...
T Consensus 80 -~~----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 80 -YI----KGYYRRAASNMALGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp -CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred -cH----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 12 3445668889999999999999999987643
No 141
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.68 E-value=0.00043 Score=53.23 Aligned_cols=102 Identities=10% Similarity=-0.043 Sum_probs=83.4
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I 215 (288)
......+|..++..|+|+++..+++++.+..+ ++ .....++..-+.+|..++++.+|...+.++......
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-----~~----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~- 97 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDA-----TP----QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG- 97 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC-----CH----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc-----cc----hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-
Confidence 45667899999999999999999999988732 12 345688888999999999999999999999887422
Q ss_pred CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 216 ~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+ ......-|.++...++|+.|..+|-++.+..
T Consensus 98 -~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 98 -D----VKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp -C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred -C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 1 3344567889999999999999999998754
No 142
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.67 E-value=9.9e-05 Score=72.51 Aligned_cols=138 Identities=12% Similarity=0.116 Sum_probs=82.9
Q ss_pred hhhhhH---HhhhhHHHHHhhhcchhHHH----HHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHH
Q 023037 131 NERLWF---KTNLKLCKIWFDMGEYGRMS----KILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQ 203 (288)
Q Consensus 131 ner~~f---~~~~kL~~lyl~~~~y~~~~----~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~ 203 (288)
+-|.|| ++.-.++.+....+...... .|+.-++..|-.- |. ....=++.+..+.|...+.+..|-.
T Consensus 180 ~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~----D~---~~qa~l~nllLRnYL~~~~y~qA~~ 252 (523)
T 4b4t_S 180 NAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH----DN---ETKAMLINLILRDFLNNGEVDSASD 252 (523)
T ss_dssp -----------------------CHHHHHHHHTHHHHHHHHCCSCS----SS---CHHHHHHHHHHHHHHHSSCSTTHHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc----Cc---chhHHHHHHHHHHHHccCcHHHHHH
Confidence 445666 44445566655544444433 3444444444433 33 3334566788999999999988888
Q ss_pred HHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh--hCChhHHHHhHHHHHHHHhcCC
Q 023037 204 LYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE--AGNQRRIQCLKYLVLANMLMES 276 (288)
Q Consensus 204 ~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e--~g~~~a~~~LKY~~L~~il~~~ 276 (288)
+..++--..+.. ....++.=....|++++-+++|..|..+|.+||+.... .....+..++||+|+|+||+|.
T Consensus 253 lvsk~~fP~~~~-sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI~V~LLlG~ 326 (523)
T 4b4t_S 253 FISKLEYPHTDV-SSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGD 326 (523)
T ss_dssp HHHHHCSCTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHHHHHHHHTC
T ss_pred HHhcCcCCcccC-CHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHHhHHhhcCC
Confidence 877763111111 12345777888999999999999999999999997643 2345789999999999999865
No 143
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.67 E-value=0.00099 Score=50.01 Aligned_cols=104 Identities=18% Similarity=0.131 Sum_probs=79.2
Q ss_pred hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHh
Q 023037 50 AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEA 129 (288)
Q Consensus 50 ~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a 129 (288)
......++..+|.++...|+++++++++++.+... +.-
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~----------------------------------------- 49 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-PKD----------------------------------------- 49 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-TTC-----------------------------------------
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCc-----------------------------------------
Confidence 34467899999999999999999999998876543 210
Q ss_pred hhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 023037 130 KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKAL 209 (288)
Q Consensus 130 ~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~ 209 (288)
..+...+|.+|...|++++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++
T Consensus 50 ------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-----~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 50 ------AKLYSNRAACYTKLLEFQLALKDCEECIQLEP-----TF-------IKGYTRKAAALEAMKDYTKAMDVYQKAL 111 (133)
T ss_dssp ------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-----Cc-------hHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 12345678888888999998888888887721 12 2567777888888899999999998888
Q ss_pred hhhc
Q 023037 210 AIKS 213 (288)
Q Consensus 210 ~~a~ 213 (288)
....
T Consensus 112 ~~~p 115 (133)
T 2lni_A 112 DLDS 115 (133)
T ss_dssp HHCG
T ss_pred HhCC
Confidence 7643
No 144
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.65 E-value=0.00067 Score=63.25 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...+++.+|..+.++|++++|+++|++.+.+. +..+. . .. .-++....
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~-~~~~~-------------~---~~---------------~~~~~~~~ 269 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYV-EGSRA-------------A---AE---------------DADGAKLQ 269 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHHH-------------H---SC---------------HHHHGGGH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh-hcCcc-------------c---cC---------------hHHHHHHH
Confidence 46778999999999999999999999999988 43210 0 00 00111223
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+..++|.+|+..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+|+.+.
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP-----SN-------TKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc-----hh-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 33456788999999999999999999999988721 12 4778888999999999999999999999885
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHH
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATD 244 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~sy 244 (288)
.. ++. +...-+.++...++++.|...
T Consensus 338 P~--~~~----~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 338 PE--DKA----IQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TT--CHH----HHHHHHHHHHHHHHHHHHHHC
T ss_pred CC--CHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 43 233 233334455566666666543
No 145
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.61 E-value=0.0005 Score=49.95 Aligned_cols=100 Identities=6% Similarity=-0.002 Sum_probs=80.5
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.+...+|.+++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++.....-.
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~ 74 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDP-----EE-------SKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEY 74 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC-----CC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc-----CC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccc
Confidence 3557899999999999999999999988822 12 25777889999999999999999999998754411
Q ss_pred ChhHHHHHHhhcchhhhhh-ccHHHHHHHHHHHHhhh
Q 023037 217 HPRIMGIIRECGGKMHMAE-RQWADAATDFFEAFKNY 252 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~e-kdy~~A~syF~EaF~~y 252 (288)
+ ..+...-|.++... ++|+.|..+|-++.+..
T Consensus 75 ~----~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 75 N----KDVWAAKADALRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp C----HHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGC
T ss_pred h----HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcc
Confidence 2 23456668889999 99999999999887654
No 146
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.61 E-value=0.0028 Score=48.28 Aligned_cols=115 Identities=13% Similarity=0.044 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++..+|.++...|++++++++|++.+... +..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~--------------------------------------------- 42 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLV--------------------------------------------- 42 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC---------------------------------------------
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCc---------------------------------------------
Confidence 4678899999999999999999999887654 210
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
..+..++|.+|...|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++.+..
T Consensus 43 --~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 108 (137)
T 3q49_B 43 --AVYYTNRALCYLKMQQPEQALADCRRALELDG-----QS-------VKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 108 (137)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-----hh-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHCh
Confidence 12456789999999999999999999988822 12 36788889999999999999999999998876
Q ss_pred c--CC-ChhHHHHHHhhc
Q 023037 214 A--IP-HPRIMGIIRECG 228 (288)
Q Consensus 214 ~--I~-~p~i~a~I~~~~ 228 (288)
. .. .+.+...+..+.
T Consensus 109 ~~~~~~~~~~~~~l~~~~ 126 (137)
T 3q49_B 109 EQRLNFGDDIPSALRIAK 126 (137)
T ss_dssp HTTCCCTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 5 22 366666555544
No 147
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.60 E-value=0.0014 Score=51.42 Aligned_cols=99 Identities=14% Similarity=0.083 Sum_probs=81.1
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|..++..|+|++|...++++.+.-+ ++. +++..-+.+|..++++.+|...|.+|..+...-
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p-----~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~- 85 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDH-----YDA-------RYFLGLGACRQSLGLYEQALQSYSYGALMDINE- 85 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCC-----ccH-------HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-
Confidence 4456789999999999999999999988722 232 677788999999999999999999999886432
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
|.. ...-|.++...|+|+.|..+|-.+.+...
T Consensus 86 -~~~----~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 86 -PRF----PFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp -THH----HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred -cHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 432 34568889999999999999999988764
No 148
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.60 E-value=0.0052 Score=58.28 Aligned_cols=181 Identities=9% Similarity=0.112 Sum_probs=108.9
Q ss_pred CCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 30 TDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLG---KYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 30 ~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g---~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
.+.+.|...++.....+++ +...|+.+|...| ++++++++|++....- +.... .+.++=..+..
T Consensus 159 ~~~~~a~~~~~~a~~~~~~-------a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g-~~~a~-----~~~~Lg~~y~~ 225 (452)
T 3e4b_A 159 QHLDDVERICKAALNTTDI-------CYVELATVYQKKQQPEQQAELLKQMEAGVSRG-TVTAQ-----RVDSVARVLGD 225 (452)
T ss_dssp GGHHHHHHHHHHHTTTCTT-------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-CSCHH-----HHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHcCCHH-------HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCC-CHHHH-----HHHHHHHHHhC
Confidence 4455566666655544322 8889999999999 9999999998886554 22111 11221112221
Q ss_pred C--CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHH-H--hhhcchhHHHHHHHHHHHhccCCCCCccccccchH
Q 023037 107 S--ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKI-W--FDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQL 181 (288)
Q Consensus 107 ~--~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~l-y--l~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~l 181 (288)
. ...+.+....+| +.+- ........+|+.+ | ...++++++...+++.-+. ++.
T Consensus 226 g~~~~~d~~~A~~~~-------~~aa--~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~-------g~~------ 283 (452)
T 3e4b_A 226 ATLGTPDEKTAQALL-------EKIA--PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA-------DQP------ 283 (452)
T ss_dssp GGGSSCCHHHHHHHH-------HHHG--GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT-------TCH------
T ss_pred CCCCCCCHHHHHHHH-------HHHc--CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC-------CCH------
Confidence 1 112232333333 3332 3334567788888 4 5788999998888887655 443
Q ss_pred HHHHHHHHHHHHhhc-----CHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhh----hccHHHHHHHHHHHHhhh
Q 023037 182 LEVYAIEIQMYTETK-----NNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMA----ERQWADAATDFFEAFKNY 252 (288)
Q Consensus 182 lEv~~lE~~~y~~~~-----n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~----ekdy~~A~syF~EaF~~y 252 (288)
+.+..-+.+|. .+ |+.+|...|.+|. -.+|..+- .-|.+|.. ++|+++|..+|-.|-+
T Consensus 284 -~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-----~g~~~A~~----~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~-- 350 (452)
T 3e4b_A 284 -RAELLLGKLYY-EGKWVPADAKAAEAHFEKAV-----GREVAADY----YLGQIYRRGYLGKVYPQKALDHLLTAAR-- 350 (452)
T ss_dssp -HHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-----TTCHHHHH----HHHHHHHTTTTSSCCHHHHHHHHHHHHT--
T ss_pred -HHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-----CCCHHHHH----HHHHHHHCCCCCCcCHHHHHHHHHHHHh--
Confidence 55556666776 44 8999999998876 22233221 12444444 6789999998888865
Q ss_pred hhhCChhH
Q 023037 253 DEAGNQRR 260 (288)
Q Consensus 253 ~e~g~~~a 260 (288)
.|++.+
T Consensus 351 --~g~~~A 356 (452)
T 3e4b_A 351 --NGQNSA 356 (452)
T ss_dssp --TTCTTH
T ss_pred --hChHHH
Confidence 455555
No 149
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.57 E-value=0.0014 Score=54.15 Aligned_cols=110 Identities=15% Similarity=0.014 Sum_probs=85.3
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCc----cccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTD----DQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~d----Dk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+|..++..|+|.+|..+++++.+.++..+... +.....+..+++..-+.+|..++++.+|...+.+++.+.
T Consensus 39 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 118 (198)
T 2fbn_A 39 FDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID 118 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 4566899999999999999999999999866532100 000113346888899999999999999999999999873
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
.. +| .....-|.+|+..++|+.|..+|-++.+..
T Consensus 119 p~--~~----~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 119 KN--NV----KALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp TT--CH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred cc--cH----HHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 21 12 344566899999999999999999998763
No 150
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.56 E-value=0.001 Score=48.51 Aligned_cols=98 Identities=11% Similarity=0.028 Sum_probs=79.8
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|..++..|+|+++...+++..+..+ ++ .+++..-+.+|...+++.+|...+.++......
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-- 70 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDP-----HN-------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-- 70 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-----Cc-------HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc--
Confidence 3556889999999999999999999988722 12 367888899999999999999999999887432
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+| .+...-|.++...++|+.|..+|-++.+..
T Consensus 71 ~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 71 WG----KGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred cH----HHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 22 344566888999999999999999998754
No 151
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.54 E-value=0.0092 Score=52.95 Aligned_cols=164 Identities=10% Similarity=0.068 Sum_probs=112.2
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|++.|++++...++... .+...++.++.+.|+++++..+|++.+..- +.-.......+. ++.. . .
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~~a~---~~~~-~-~ 182 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDIDPT---LVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAAL---MEYY-C-S 182 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSCTH---HHHHHHHHHHHHHHCHHHHHHHHHHHHTST-TCCTHHHHHHHH---HHHH-T-S
T ss_pred cCCHHHHHHHHHHHHhccccCcc---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHH---HHHH-H-c
Confidence 46788999999999998764332 266889999999999999999999998765 322222221111 1110 0 1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
++.+.....|+.+++. ..+. ..+-..++.++...|++++|..++++..+.+.-++ ++ -.+++..-
T Consensus 183 -~~~~~A~~~~~~al~~---~p~~---~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p--~~------~~~l~~~~ 247 (308)
T 2ond_A 183 -KDKSVAFKIFELGLKK---YGDI---PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPP--EK------SGEIWARF 247 (308)
T ss_dssp -CCHHHHHHHHHHHHHH---HTTC---HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCG--GG------CHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHh---CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCH--HH------HHHHHHHH
Confidence 2344555555555543 2221 24458889999999999999999999988643221 11 23667777
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 189 IQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
++++...|+...+..++.+++.....-+
T Consensus 248 ~~~~~~~g~~~~a~~~~~~a~~~~p~~~ 275 (308)
T 2ond_A 248 LAFESNIGDLASILKVEKRRFTAFREEY 275 (308)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHccccc
Confidence 7888889999999999999998765433
No 152
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.54 E-value=0.0015 Score=52.35 Aligned_cols=100 Identities=12% Similarity=0.089 Sum_probs=81.5
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccC
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAI 215 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I 215 (288)
......+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+|..+...
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~- 87 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH-----YD-------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX- 87 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc-----cc-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-
Confidence 34567899999999999999999999988822 22 266777899999999999999999999987543
Q ss_pred CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhh
Q 023037 216 PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYD 253 (288)
Q Consensus 216 ~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~ 253 (288)
+|.. ...-|.++...|+++.|..+|-.+.+...
T Consensus 88 -~~~~----~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 88 -EPRF----PFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp -CTHH----HHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred -CchH----HHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 2432 34558899999999999999999988664
No 153
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.52 E-value=0.0035 Score=46.40 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...++..+|.++...|+++++.+++++.+... +.-
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~-------------------------------------------- 45 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELN-PAN-------------------------------------------- 45 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC--------------------------------------------
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCC--------------------------------------------
Confidence 46788899999999999999999998876543 210
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+...+|.++...|+|+++...++++.+..+ ++ .+++..-+.+|..++++.+|...|.++....
T Consensus 46 ---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 46 ---AVYFCNRAAAYSKLGNYAGAVQDCERAICIDP-----AY-------SKAYGRMGLALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred ---HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc-----cC-------HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 12345678888888999998888888887721 12 3567777888888999999999999888774
Q ss_pred c
Q 023037 213 S 213 (288)
Q Consensus 213 ~ 213 (288)
.
T Consensus 111 p 111 (131)
T 2vyi_A 111 P 111 (131)
T ss_dssp T
T ss_pred c
Confidence 3
No 154
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.51 E-value=0.0035 Score=45.95 Aligned_cols=99 Identities=18% Similarity=0.293 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++..++.++...|+++++.+++.+.+... +. .
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~--------------------------~------------------- 42 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PN--------------------------N------------------- 42 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT--------------------------C-------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cC--------------------------c-------------------
Confidence 5677889999999999999998888776543 11 0
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+...++.++...|+|+++..+++++.+..+ ++ .+++..-+.+|...+++.+|...+.++....
T Consensus 43 --~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 43 --AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----NN-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC-----cc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 01234677888888888888888888877621 12 2556667888888888888888888887764
No 155
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.50 E-value=0.0036 Score=45.53 Aligned_cols=99 Identities=12% Similarity=0.092 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
..++..+|.++...|+++++.+++++.+... +.-
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~--------------------------------------------- 37 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD-PHN--------------------------------------------- 37 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC---------------------------------------------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCc---------------------------------------------
Confidence 4677889999999999999999888776543 210
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+...+|.+|...|+|+++...++++.+..+ ++ .+++..-+.+|..++++.+|...|.++....
T Consensus 38 --~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 38 --HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-----DW-------GKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp --HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc-----cc-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 12345677888888999998888888887721 12 2667777888888899999999988887654
No 156
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.46 E-value=0.0046 Score=45.30 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=78.3
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|.++...|+++++..+++++.+..+ ++ .+++..-+.+|...+++.+|...+.++......
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-----~~-------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-- 75 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----NN-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-- 75 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-----Cc-------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc--
Confidence 4567899999999999999999999988722 22 256777789999999999999999999876321
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+| .+...-|.++...++|+.|..+|-++.+..
T Consensus 76 ~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 76 NA----EAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 23 233456888999999999999999998753
No 157
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.44 E-value=0.00024 Score=68.46 Aligned_cols=117 Identities=11% Similarity=0.109 Sum_probs=83.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|++.++.+++. ..++.++|.+|.++|++++|++++++.+..- +
T Consensus 18 ~~g~~~~A~~~~~~Al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p--------------------- 71 (477)
T 1wao_1 18 KAKDYENAIKFYSQAIELNPSN----AIYYGNRSLAYLRTECYGYALGDATRAIELD-K--------------------- 71 (477)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-T---------------------
T ss_pred HhCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-C---------------------
Confidence 5789999999999999987543 5678899999999999999999998876553 2
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHH
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAI 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~l 187 (288)
+ ......++|.+|...|+|++|.+.++++.+..+ ++. . .-..+.
T Consensus 72 -~-------------------------~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p-----~~~---~--~~~~l~ 115 (477)
T 1wao_1 72 -K-------------------------YIKGYYRRAASNMALGKFRAALRDYETVVKVKP-----HDK---D--AKMKYQ 115 (477)
T ss_dssp -T-------------------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----TCT---T--HHHHHH
T ss_pred -C-------------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCH---H--HHHHHH
Confidence 1 012345788999999999999999999988832 222 1 111222
Q ss_pred HHHHHHhhcCHHHHHHHHH
Q 023037 188 EIQMYTETKNNKKLKQLYQ 206 (288)
Q Consensus 188 E~~~y~~~~n~~kak~~y~ 206 (288)
....+..++++.+|.+.|.
T Consensus 116 ~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 116 ECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHHHhcccc
Confidence 3333777889999999998
No 158
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.44 E-value=0.0016 Score=51.97 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=85.0
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCC----Cccc--cccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHh
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG----TDDQ--KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~----~dDk--~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~ 210 (288)
.....+|..++..|+|.+|...+++..+.++.... +++. ........++..-+.+|..++++.+|...+++|+.
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 55678999999999999999999988887432110 0110 00255678999999999999999999999999998
Q ss_pred hhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 211 IKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 211 ~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+.. .- +.....-|.+|+..|+|+.|..+|-.+.+..
T Consensus 92 ~~p-----~~-~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 92 REE-----TN-EKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HST-----TC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cCC-----cc-hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 842 21 2344566899999999999999999998863
No 159
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.00022 Score=52.49 Aligned_cols=95 Identities=13% Similarity=0.041 Sum_probs=75.0
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+++.+...-.
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 72 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQP-----QN-------PVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE 72 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-----CC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc
Confidence 3456789999999999999999999988822 12 36788889999999999999999999998877666
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHH
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAAT 243 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~s 243 (288)
.+...+.....-|..+...+++..|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ 99 (111)
T 2l6j_A 73 HVAIRSKLQYRLELAQGAVGSVQIPVV 99 (111)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHh
Confidence 666677777777887777776655543
No 160
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.37 E-value=0.002 Score=48.79 Aligned_cols=89 Identities=9% Similarity=0.120 Sum_probs=68.4
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|+..|++++....+... ...++.++|.+|..+|+++++++++++.+... |..
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~-------------------- 60 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQF-PNH-------------------- 60 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC--------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCc--------------------
Confidence 46788999999999998422222 35788999999999999999999999887665 321
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhc
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSC 166 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~ 166 (288)
..+..++|.+|...|+|++|...++++....
T Consensus 61 ---------------------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 61 ---------------------------QALRVFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp ---------------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred ---------------------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 1234578999999999999999999988873
No 161
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.32 E-value=0.031 Score=53.36 Aligned_cols=190 Identities=13% Similarity=0.099 Sum_probs=120.1
Q ss_pred HHHHHHHHHhhc-CCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcc
Q 023037 33 EGALAGFAEVVA-MEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN 111 (288)
Q Consensus 33 ~~Al~~f~~ii~-~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~ 111 (288)
++|++.|++.+. ..++. ......++.++.+.|+++++.+.|++.+..- +.-+ +.+..+......
T Consensus 303 ~~A~~~~~~Al~~~~p~~----~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~----~~~~~~~~~~~~------ 367 (530)
T 2ooe_A 303 DEAANIYERAISTLLKKN----MLLYFAYADYEESRMKYEKVHSIYNRLLAIE-DIDP----TLVYIQYMKFAR------ 367 (530)
T ss_dssp HHHHHHHHHHTTTTCSSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS-SSCH----HHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHhCccc----HHHHHHHHHHHHhcCCHHHHHHHHHHHhCcc-ccCc----hHHHHHHHHHHH------
Confidence 389999999997 55532 3455678899999999999999999998754 3211 122222222111
Q ss_pred hhhHHHHHHHHHHHHHHhhhh-hhhHHhhhhHHHH-HhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHH
Q 023037 112 FSLLREFYQTTLKALEEAKNE-RLWFKTNLKLCKI-WFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEI 189 (288)
Q Consensus 112 ~~~~~~~~~~~l~~i~~a~ne-r~~f~~~~kL~~l-yl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~ 189 (288)
...-++.+.+.++.+-.. .....+.+..+.+ +...|++++|..++++..+.++ ++. +++..-+
T Consensus 368 ---~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p-----~~~-------~~~~~~~ 432 (530)
T 2ooe_A 368 ---RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG-----DIP-------EYVLAYI 432 (530)
T ss_dssp ---HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT-----TCH-------HHHHHHH
T ss_pred ---HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCC-----CCH-------HHHHHHH
Confidence 111123333333333211 1112333333433 3358999999999999988853 232 5666667
Q ss_pred HHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 190 QMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 190 ~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
.++...|+..+|+.+|.+|+..... .|.-.+.+-..-+.+-...||.++|...+-.+.+.+.+
T Consensus 433 ~~~~~~g~~~~Ar~~~~~al~~~~~--~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~r~~~~~p~ 495 (530)
T 2ooe_A 433 DYLSHLNEDNNTRVLFERVLTSGSL--PPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 495 (530)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHSCCS--CGGGCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHH
T ss_pred HHHHhCCCHhhHHHHHHHHHhccCC--CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCch
Confidence 7788899999999999999875321 24433333333333344568999999999998888863
No 162
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.32 E-value=0.0018 Score=50.03 Aligned_cols=96 Identities=6% Similarity=-0.008 Sum_probs=78.8
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
....+|..++..|++.+|...++++.+.-+ ++ .+++..-+.+|..++++.+|...|.+|+.+... +
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P-----~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~--~ 84 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEP-----ER-------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPK--D 84 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCC-----CC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C
Confidence 356789999999999999999999988822 22 378888999999999999999999999987543 1
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
|. ....-|.++...|+|+.|...|-++.+.
T Consensus 85 ~~----~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 85 IA----VHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HH----HHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HH----HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 22 3456688899999999999999888764
No 163
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.32 E-value=0.0035 Score=60.07 Aligned_cols=105 Identities=10% Similarity=-0.003 Sum_probs=87.5
Q ss_pred hhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC---ChhHHHHH
Q 023037 148 DMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP---HPRIMGII 224 (288)
Q Consensus 148 ~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~---~p~i~a~I 224 (288)
..|+|++|..++++.....+..=|. +- ..++.++..-+.+|..+|++.+|..+|.+|+.+...++ ||. .|..
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~-~H---p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~ 384 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFED-SN---VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASM 384 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCT-TS---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccCh-hc---hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHH
Confidence 4688999999999998886655443 33 67899999999999999999999999999999987544 454 4555
Q ss_pred HhhcchhhhhhccHHHHHHHHHHHHhhhhhh-CC
Q 023037 225 RECGGKMHMAERQWADAATDFFEAFKNYDEA-GN 257 (288)
Q Consensus 225 ~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~-g~ 257 (288)
..--|.+|...|+|+.|..++-+|++.+... |.
T Consensus 385 l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~ 418 (433)
T 3qww_A 385 WLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGK 418 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCC
Confidence 5677899999999999999999999999874 53
No 164
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.27 E-value=0.018 Score=62.84 Aligned_cols=176 Identities=14% Similarity=0.183 Sum_probs=103.6
Q ss_pred CCCCHHHHHHHHHHhhcCCc---cch---------------hhHHHHHH--------HHHHHHHHcCCHHHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEP---EKA---------------EWGFKALK--------QTVKLYYRLGKYKEMMDAYREML 81 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~---e~~---------------~~~~kal~--------~l~~l~~~~g~~~~~l~~~~~~l 81 (288)
..++|.+|++.|++++-..+ ++. +-....+. .+|.++.+.|.+++|.++|++.-
T Consensus 997 ~aglp~EaieLLEKivl~~s~fs~n~~LqnlLi~tAIkaD~~Rv~eyI~kLd~~d~~eIA~Iai~lglyEEAf~IYkKa~ 1076 (1630)
T 1xi4_A 997 TADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFD 1076 (1630)
T ss_pred hCCCHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhChhhHHHHHHHhhhccHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 46899999999999994322 111 11122222 25899999999999999999974
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHH
Q 023037 82 TYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKE 161 (288)
Q Consensus 82 ~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~e 161 (288)
.+. +.++-+++.+. . ++.+.+..+.+.+...|+ ++|..+.+.|+|.+|...+.+
T Consensus 1077 ~~~----------~A~~VLie~i~--------n----ldrAiE~Aervn~p~vWs----qLAKAql~~G~~kEAIdsYiK 1130 (1630)
T 1xi4_A 1077 VNT----------SAVQVLIEHIG--------N----LDRAYEFAERCNEPAVWS----QLAKAQLQKGMVKEAIDSYIK 1130 (1630)
T ss_pred CHH----------HHHHHHHHHHh--------h----HHHHHHHHHhcCCHHHHH----HHHHHHHhCCCHHHHHHHHHh
Confidence 222 22222333232 1 233333333344445554 677777777777777666533
Q ss_pred HHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc-----------------------CCCh
Q 023037 162 LHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA-----------------------IPHP 218 (288)
Q Consensus 162 lkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~-----------------------I~~p 218 (288)
. +|. +...+ =+..+...|++..|.+.|.+|+..... |..|
T Consensus 1131 A----------dD~---say~e----Va~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~ 1193 (1630)
T 1xi4_A 1131 A----------DDP---SSYME----VVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGP 1193 (1630)
T ss_pred c----------CCh---HHHHH----HHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCC
Confidence 2 343 33333 366677777777777777776655421 1111
Q ss_pred hHHHHHHhhcchhhhhhccHHHHHHHHHHH
Q 023037 219 RIMGIIRECGGKMHMAERQWADAATDFFEA 248 (288)
Q Consensus 219 ~i~a~I~~~~G~l~~~ekdy~~A~syF~Ea 248 (288)
.. +.+. .-|.-+..+|+|..|..+|..|
T Consensus 1194 n~-ad~~-~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1194 NN-AHIQ-QVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred CH-HHHH-HHHHHHHhcCCHHHHHHHHHhh
Confidence 11 2222 3677788888888888776544
No 165
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.24 E-value=0.0062 Score=58.14 Aligned_cols=129 Identities=12% Similarity=0.042 Sum_probs=102.1
Q ss_pred hhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC--
Q 023037 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP-- 216 (288)
Q Consensus 139 ~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~-- 216 (288)
-++.+.-+..+|+|++|..+.+++....+..=|. +- ...+.++..-+.+|..+|++.+|..+|.+++.+-..++
T Consensus 290 ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~-~h---~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 290 SLKKIEELKAHWKWEQVLAMCQAIISSNSERLPD-IN---IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCT-TS---HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCc-cc---hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC
Confidence 3455555668899999999999998875554432 33 67899999999999999999999999999999987544
Q ss_pred -ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhh-CC--hhHHHHhHHHHHHHH
Q 023037 217 -HPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEA-GN--QRRIQCLKYLVLANM 272 (288)
Q Consensus 217 -~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~-g~--~~a~~~LKY~~L~~i 272 (288)
||. .|....--|.+|...|+|+.|..++-+|++.+... |. |.-...+.-|--|.+
T Consensus 366 ~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 424 (429)
T 3qwp_A 366 SHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDA 424 (429)
T ss_dssp SCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred CChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 454 56666778899999999999999999999999975 53 666666555544443
No 166
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.23 E-value=0.0089 Score=56.01 Aligned_cols=137 Identities=8% Similarity=0.008 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
-..++..++.++...|+++++++.|++.+..- +.-..+...... ++...+ .+. +.-+..+.+.++-.
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~~~g~--~l~~~g----~d~---~eAl~~~~~al~l~--- 162 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRV--LLKSLQ----KDL---HEEMNYITAIIEEQ--- 162 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHH--HHHHTT----CCH---HHHHHHHHHHHHHC---
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHHHHHH--HHHHcc----cCH---HHHHHHHHHHHHHC---
Confidence 35778899999999999999999999999887 654433332222 111121 112 33333333333322
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
-....+..++|.+|...|+|+++...++++.+. |.+ . .+++..-+.++..+|++.+|...|++|+.+.
T Consensus 163 P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~l-------dP~---~--~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~ 230 (382)
T 2h6f_A 163 PKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ-------DAK---N--YHAWQHRQWVIQEFKLWDNELQYVDQLLKED 230 (382)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH-------CTT---C--HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------Ccc---C--HHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Confidence 223456788999999999999999999999998 332 1 3778888999999999999999999999876
Q ss_pred cc
Q 023037 213 SA 214 (288)
Q Consensus 213 ~~ 214 (288)
-.
T Consensus 231 P~ 232 (382)
T 2h6f_A 231 VR 232 (382)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 167
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.23 E-value=0.0036 Score=52.22 Aligned_cols=102 Identities=12% Similarity=0.152 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHhhcCCcc-------c-hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPE-------K-AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINN 99 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e-------~-~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ 99 (288)
..+++++|++.|.+.+..+++ . ......++.++|.++.+.|+++++++.|.+.+.+++..
T Consensus 23 ~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~------------ 90 (159)
T 2hr2_A 23 VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR------------ 90 (159)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------
T ss_pred HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc------------
Confidence 468999999999999998654 1 11234489999999999999999999999998875222
Q ss_pred HHHHhccC-CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhcc
Q 023037 100 IMDFVSGS-ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQ 167 (288)
Q Consensus 100 ild~~~~~-~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~ 167 (288)
+.+ |+ +-+-|.+...++|..+...|+|++|...+++..++.+
T Consensus 91 -----~e~~pd---------------------~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 91 -----GELNQD---------------------EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp -----CCTTST---------------------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred -----ccCCCc---------------------hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 122 32 3355666778999999999999999999999999954
No 168
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.21 E-value=0.0023 Score=46.25 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhh
Q 023037 56 ALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLW 135 (288)
Q Consensus 56 al~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~ 135 (288)
++..+|.++...|++++++.++++.+... + . .
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~----------------------~----~--------------------- 39 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLD-P----------------------E----E--------------------- 39 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHC-C----------------------C----C---------------------
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhC-c----------------------C----C---------------------
Confidence 45678999999999999999998876543 1 1 0
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHhhh
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTET-KNNKKLKQLYQKALAIK 212 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~-~n~~kak~~y~~A~~~a 212 (288)
..+...+|.+|...|+|++|...+++..+..+. ..-.+++..-+.+|..+ +++.+|...++.+....
T Consensus 40 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 40 SKYWLMKGKALYNLERYEEAVDCYNYVINVIED----------EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC----------TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc----------cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcc
Confidence 012357889999999999999999999887221 11247788889999999 99999999999886543
No 169
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.19 E-value=0.0018 Score=59.15 Aligned_cols=151 Identities=9% Similarity=0.064 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
...+++.+|..+.+.|++++|+.+|++.+.+. +.-. . +. ..+ ..... ..
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-p~~~-------~------~~-~~~----~~~~~----~~-------- 226 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM-GDDF-------M------FQ-LYG----KYQDM----AL-------- 226 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS-CHHH-------H------HT-CCH----HHHHH----HH--------
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh-ccch-------h------hh-hcc----cHHHH----HH--------
Confidence 46778899999999999999999999998877 4311 0 00 000 11100 00
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+.+++|.+|+..|+|.+|...++++.+. +.. -...+..-+.+|..++++.+|...|.+|+.+.
T Consensus 227 ~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~-------~p~-----~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 227 AVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTE-------EEK-----NPKALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-------CTT-----CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCC-----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 111246789999999999999999999999988 221 13678888999999999999999999998775
Q ss_pred ccCCChhHHHHHHhhcchh-hhhhccHHHHHHHHHHHHhhh
Q 023037 213 SAIPHPRIMGIIRECGGKM-HMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l-~~~ekdy~~A~syF~EaF~~y 252 (288)
..- |.+. ..-+.+ ....+.++.|...|..+|...
T Consensus 295 p~~--~~a~----~~L~~l~~~~~~~~~~a~~~~~~~l~~~ 329 (338)
T 2if4_A 295 PDD--KAIR----RELRALAEQEKALYQKQKEMYKGIFKGK 329 (338)
T ss_dssp -----------------------------------------
T ss_pred CCC--HHHH----HHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 431 2222 222333 345667788888888877654
No 170
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.18 E-value=0.018 Score=52.98 Aligned_cols=161 Identities=11% Similarity=0.031 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhh
Q 023037 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERL 134 (288)
Q Consensus 55 kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~ 134 (288)
-++.-+|.++...|++++|++++++.+..- + ...
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~~-----------------------~-----------------------~~~ 134 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDND-----------------------E-----------------------AEG 134 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTSS-----------------------C-----------------------STT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhccC-----------------------C-----------------------CcC
Confidence 345688999999999999999887763221 0 012
Q ss_pred hHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccc-cccchHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHhh
Q 023037 135 WFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQ-KKGSQLLEVYAIEIQMYTETK--NNKKLKQLYQKALAI 211 (288)
Q Consensus 135 ~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk-~~~~~llEv~~lE~~~y~~~~--n~~kak~~y~~A~~~ 211 (288)
.+.+...++.+|+..|+.+.|.++++++.+. ++. .-+.--+-+++.|+-+....| ++..|-..|......
T Consensus 135 ~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~-------~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~ 207 (310)
T 3mv2_B 135 TTELLLLAIEVALLNNNVSTASTIFDNYTNA-------IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT 207 (310)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-------CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 2345567889999999999999999999888 320 000012336777886666555 899999999996432
Q ss_pred hccCCC-hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh-----hCChhHHHHhHHHHHHHHhcCC
Q 023037 212 KSAIPH-PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE-----AGNQRRIQCLKYLVLANMLMES 276 (288)
Q Consensus 212 a~~I~~-p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e-----~g~~~a~~~LKY~~L~~il~~~ 276 (288)
-..... +.+.+ .|+..|+|..|...+-...+.|-+ .++|.--.+|--++.|..+.+.
T Consensus 208 ~p~~~~~~lLln--------~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 208 FPTWKTQLGLLN--------LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL 270 (310)
T ss_dssp SCSHHHHHHHHH--------HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC
T ss_pred CCCcccHHHHHH--------HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh
Confidence 111001 12222 699999999999999765555422 2235556667777777777664
No 171
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.15 E-value=0.0042 Score=56.46 Aligned_cols=207 Identities=9% Similarity=-0.050 Sum_probs=129.0
Q ss_pred HHHHHHhhcccCCCCHHHHHHHHHHhhcCCcc-chhhHHHHHHHH-------HHHHHHcCCHHHHHHHHHHHHHHHHhhh
Q 023037 17 RVLCSILEKGLVETDPEGALAGFAEVVAMEPE-KAEWGFKALKQT-------VKLYYRLGKYKEMMDAYREMLTYIKSAV 88 (288)
Q Consensus 17 ~~~~y~~ak~~~~~d~~~Al~~f~~ii~~~~e-~~~~~~kal~~l-------~~l~~~~g~~~~~l~~~~~~l~~~~~~v 88 (288)
-..+|-.|-+....|+..|++.|.+++..+++ -.-| ..+ +.++...+++.+++..++.-+.+- +.-
T Consensus 7 ~~~~~~~~~~~~~~d~~~A~~~F~~a~~~dP~~~Daw-----~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~-p~~ 80 (282)
T 4f3v_A 7 LASLFESAVSMLPMSEARSLDLFTEITNYDESACDAW-----IGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQIS-MST 80 (282)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHH-----HHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCC-GGG
T ss_pred HHHHHHHHhcccCCCHHHHHHHHHHHHHhChhhhHHH-----HhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCC-hhh
Confidence 34445555556689999999999999999885 3556 334 556666666677776666665533 211
Q ss_pred hhhhHH---------------HHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhh-hhhhhHHhhhhHHHHHhhhcch
Q 023037 89 TRNYSE---------------KCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAK-NERLWFKTNLKLCKIWFDMGEY 152 (288)
Q Consensus 89 ~ka~~~---------------k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~-ner~~f~~~~kL~~lyl~~~~y 152 (288)
-.+... .-++--+-.+- ....-|+.+.+.++... ..-.+. ....++.++++.|+|
T Consensus 81 l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L--------~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~ 151 (282)
T 4f3v_A 81 LNARIAIGGLYGDITYPVTSPLAITMGFAACE--------AAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERW 151 (282)
T ss_dssp GCCEEECCTTTCCCEEECSSHHHHHHHHHHHH--------HHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCH
T ss_pred hhhhhccCCcccccccccCCHhHHHHHHHHHH--------HHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCH
Confidence 000000 00000000000 00112344444444322 112233 667778889999999
Q ss_pred hHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-hhHHHHHHhhcchh
Q 023037 153 GRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGIIRECGGKM 231 (288)
Q Consensus 153 ~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p~i~a~I~~~~G~l 231 (288)
+++...+++..+. .|. .+--+++..-+.++..+|++.+|...|.++.. -++ |..........|.+
T Consensus 152 ~dA~~~l~~a~~~-------~d~---~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~----g~~~P~~~~da~~~~gla 217 (282)
T 4f3v_A 152 TDVIDQVKSAGKW-------PDK---FLAGAAGVAHGVAAANLALFTEAERRLTEAND----SPAGEACARAIAWYLAMA 217 (282)
T ss_dssp HHHHHHHTTGGGC-------SCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT----STTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcc-------CCc---ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc----CCCCccccHHHHHHHHHH
Confidence 9888888755443 333 33356888888999999999999999998762 344 66667777888888
Q ss_pred hhhhccHHHHHHHHHHHHhhh
Q 023037 232 HMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 232 ~~~ekdy~~A~syF~EaF~~y 252 (288)
+...|+.+.|...|-++...-
T Consensus 218 L~~lGr~deA~~~l~~a~a~~ 238 (282)
T 4f3v_A 218 RRSQGNESAAVALLEWLQTTH 238 (282)
T ss_dssp HHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHcCCHHHHHHHHHHHHhcC
Confidence 999999999999888887643
No 172
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.14 E-value=0.0067 Score=48.70 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=84.8
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHH-HHhhcCH--HHHHHHHHHHHhhhc
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM-YTETKNN--KKLKQLYQKALAIKS 213 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~-y~~~~n~--~kak~~y~~A~~~a~ 213 (288)
.+...+|.+|+..|+|++|...++++.+..+ ++ .+++..-+.+ |...+++ .+|...|.+++....
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p 112 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRG-----EN-------AELYAALATVLYYQASQHMTAQTRAMIDKALALDS 112 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC-----SC-------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----CC-------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC
Confidence 4667899999999999999999999998832 12 3566777888 8889998 999999999998743
Q ss_pred cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHHhHHH
Q 023037 214 AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYL 267 (288)
Q Consensus 214 ~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~LKY~ 267 (288)
. +| .....-|.++...|+|+.|..+|-++++.... ++.+...+.-+
T Consensus 113 ~--~~----~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~~~~i 158 (177)
T 2e2e_A 113 N--EI----TALMLLASDAFMQANYAQAIELWQKVMDLNSP--RINRTQLVESI 158 (177)
T ss_dssp T--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT--TSCHHHHHHHH
T ss_pred C--cH----HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC--CccHHHHHHHH
Confidence 2 12 33456688999999999999999999987643 33343444333
No 173
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.12 E-value=0.0028 Score=47.03 Aligned_cols=73 Identities=19% Similarity=0.230 Sum_probs=57.8
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhc
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~ 105 (288)
..+++++|++.|+++++.+++.. .++..+|.+|...|+++++++.|++.+... +..+.....+-+..++...+
T Consensus 19 ~~g~~~~A~~~~~~al~~~p~~~----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-~~~~~~~~~~~l~~~l~~~~ 91 (100)
T 3ma5_A 19 KHDNASRALALFEELVETDPDYV----GTYYHLGKLYERLDRTDDAIDTYAQGIEVA-REEGTQKDLSELQDAKLKAE 91 (100)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCT----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhh-hcCCchhHHHHHHHHHHHcc
Confidence 35899999999999999876533 377899999999999999999999999988 55555555555555555444
No 174
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.04 E-value=0.017 Score=54.69 Aligned_cols=99 Identities=8% Similarity=0.016 Sum_probs=56.6
Q ss_pred hhhhHHHHHhhhc---chhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhh----cCHHHHHHHHHHHHh
Q 023037 138 TNLKLCKIWFDMG---EYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTET----KNNKKLKQLYQKALA 210 (288)
Q Consensus 138 ~~~kL~~lyl~~~---~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~----~n~~kak~~y~~A~~ 210 (288)
...+|+.+|...| ++.++...+++.-.. ++. ....+..-+.+|... +|+.+|...|.+|.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~-------g~~-----~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa- 244 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSR-------GTV-----TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA- 244 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-------TCS-----CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHC-------CCH-----HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-
Confidence 6678899999888 777777777666555 221 012223334455444 57777777777765
Q ss_pred hhccCCChhHHHHHHhhcchh-h--hhhccHHHHHHHHHHHHhhhhhhCChhHH
Q 023037 211 IKSAIPHPRIMGIIRECGGKM-H--MAERQWADAATDFFEAFKNYDEAGNQRRI 261 (288)
Q Consensus 211 ~a~~I~~p~i~a~I~~~~G~l-~--~~ekdy~~A~syF~EaF~~y~e~g~~~a~ 261 (288)
-.+|..+-.+ |.+ + ...+|+++|..+|-.|. +.|++.+.
T Consensus 245 ----~g~~~a~~~L----g~~~~~~~~~~d~~~A~~~~~~Aa----~~g~~~A~ 286 (452)
T 3e4b_A 245 ----PGYPASWVSL----AQLLYDFPELGDVEQMMKYLDNGR----AADQPRAE 286 (452)
T ss_dssp ----GGSTHHHHHH----HHHHHHSGGGCCHHHHHHHHHHHH----HTTCHHHH
T ss_pred ----CCCHHHHHHH----HHHHHhCCCCCCHHHHHHHHHHHH----HCCCHHHH
Confidence 1223322222 222 1 24667777777777765 34555553
No 175
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.00 E-value=0.0063 Score=56.54 Aligned_cols=110 Identities=10% Similarity=-0.003 Sum_probs=84.0
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCC--cc--ccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGT--DD--QKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~--dD--k~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+|..++..|+|++|...++++.+.++..+.. .+ .........++..-+.+|..++++.+|...|.+|+.+.
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 446689999999999999999999988853321000 00 00124567899999999999999999999999999864
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
. . .+.....-|.+|...++|+.|..+|-+|.+..
T Consensus 304 p-----~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 304 P-----S-NTKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp T-----T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred c-----h-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 2 2 13344566889999999999999999998864
No 176
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.99 E-value=0.045 Score=45.95 Aligned_cols=150 Identities=12% Similarity=0.028 Sum_probs=101.1
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLG----KYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 104 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g----~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~ 104 (288)
..|+++|++.|++.++.. . ..|...|+.+|.. + ++++++++|++....- ...+..++=..+
T Consensus 31 ~~~~~~A~~~~~~a~~~g----~--~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g--------~~~a~~~Lg~~y 95 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAAAQG----D--GDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG--------SKSGEIVLARVL 95 (212)
T ss_dssp HTCHHHHHHHHHHHHHTT----C--HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcC----C--HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHH
Confidence 479999999999998753 1 4788899999998 7 9999999999984421 122333332223
Q ss_pred ccCC--CcchhhHHHHHHHHHHHHHHhhhhh---hhHHhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCccc
Q 023037 105 SGSA--SQNFSLLREFYQTTLKALEEAKNER---LWFKTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQ 175 (288)
Q Consensus 105 ~~~~--~~~~~~~~~~~~~~l~~i~~a~ner---~~f~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk 175 (288)
.... ..+. +.+.+.++.+-... .......+|+.+|.. .+++.++...+++.-.. + ++.
T Consensus 96 ~~g~g~~~d~-------~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~---~---~~~ 162 (212)
T 3rjv_A 96 VNRQAGATDV-------AHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL---S---RTG 162 (212)
T ss_dssp TCGGGSSCCH-------HHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT---S---CTT
T ss_pred HcCCCCccCH-------HHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc---C---CCH
Confidence 2210 1223 33333333332222 236788899999999 89999999999988665 1 122
Q ss_pred cccchHHHHHHHHHHHHHhh------cCHHHHHHHHHHHHhhhc
Q 023037 176 KKGSQLLEVYAIEIQMYTET------KNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 176 ~~~~~llEv~~lE~~~y~~~------~n~~kak~~y~~A~~~a~ 213 (288)
+.+..-+.+|... +|+.+|...|.+|....+
T Consensus 163 -------~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 163 -------YAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp -------HHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred -------HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 3455567777653 399999999999977643
No 177
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.98 E-value=0.0056 Score=58.29 Aligned_cols=110 Identities=17% Similarity=0.175 Sum_probs=86.7
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcc---ccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDD---QKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dD---k~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
.....+|..|+..|+|.+|...+++..+..+..+.-++ .......+.+|..-+.+|..++++.+|...|++|+.+..
T Consensus 269 ~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 348 (457)
T 1kt0_A 269 AIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS 348 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 55678999999999999999999999998554321001 011245578999999999999999999999999998753
Q ss_pred cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 214 AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 214 ~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
. + ......-|.+|+..++|+.|..+|-.|.+..
T Consensus 349 ~--~----~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 349 A--N----EKGLYRRGEAQLLMNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp T--C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred c--c----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3 1 2334566999999999999999999998864
No 178
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.90 E-value=0.01 Score=52.44 Aligned_cols=99 Identities=10% Similarity=0.033 Sum_probs=80.5
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
....+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+|+.+.
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-----~~-------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~----- 68 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNP-----LV-------AVYYTNRALCYLKMQQPEQALADCRRALELD----- 68 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-----CC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----cc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----
Confidence 456789999999999999999999988822 22 3778888999999999999999999998763
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
|.- ......-|.++...|+|+.|..+|-++.+..-+
T Consensus 69 p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 104 (281)
T 2c2l_A 69 GQS-VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 104 (281)
T ss_dssp TTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc
Confidence 221 123445689999999999999999999986654
No 179
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.86 E-value=0.016 Score=44.43 Aligned_cols=96 Identities=13% Similarity=-0.056 Sum_probs=74.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhH
Q 023037 57 LKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWF 136 (288)
Q Consensus 57 l~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f 136 (288)
...+|..+.+.|++++++..+++.+..- +.- .
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~-P~~-----------------------------------------------~ 51 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKE-PER-----------------------------------------------E 51 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTC-----------------------------------------------H
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC-CCC-----------------------------------------------H
Confidence 4678899999999999999998887654 321 1
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
.....+|.++...|++++|...++++.+.-+ ++ .+++..-+.+|..+|++.+|...|.+++...
T Consensus 52 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-----~~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 52 EAWRSLGLTQAENEKDGLAIIALNHARMLDP-----KD-------IAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 2345688889999999999999999888822 22 2677788889999999999999999987654
No 180
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.81 E-value=0.033 Score=44.89 Aligned_cols=164 Identities=12% Similarity=0.094 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhh
Q 023037 56 ALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLW 135 (288)
Q Consensus 56 al~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~ 135 (288)
.+..++..+...|+++++...|++.+..- |.-+.+....+. .+.. . ++++.....++.++ +-.. .-.+
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~-----~~~~-~-g~~~~A~~~~~~a~---~~~p-~~~~ 75 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDEL-QSRGDVKLAKAD-----CLLE-T-KQFELAQELLATIP---LEYQ-DNSY 75 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHH-HTSHHHHHHHHH-----HHHH-T-TCHHHHHHHHTTCC---GGGC-CHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHH-----HHHH-C-CCHHHHHHHHHHhh---hccC-ChHH
Confidence 35678899999999999999999988776 554332222211 1111 1 11212222222111 1111 1111
Q ss_pred HHhhhhHHHHH-hhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc
Q 023037 136 FKTNLKLCKIW-FDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA 214 (288)
Q Consensus 136 f~~~~kL~~ly-l~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~ 214 (288)
..-++.+. ...++..++...+++..+.-+ ++ .+++..-+.+|...|++.+|...|.+++.....
T Consensus 76 ---~~~~~~~~~~~~~~~~~a~~~~~~al~~~P-----~~-------~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 76 ---KSLIAKLELHQQAAESPELKRLEQELAANP-----DN-------FELACELAVQYNQVGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp ---HHHHHHHHHHHHHTSCHHHHHHHHHHHHST-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred ---HHHHHHHHHHhhcccchHHHHHHHHHHhCC-----CC-------HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc
Confidence 11123222 233344456667777666621 23 277888899999999999999999999876533
Q ss_pred CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHh
Q 023037 215 IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (288)
Q Consensus 215 I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~ 250 (288)
-.+| .....-|.++...|+++.|...|-.++.
T Consensus 141 ~~~~----~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 141 AQDG----EVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp TTTT----HHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cChH----HHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 3222 2233446778888888888888877654
No 181
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.80 E-value=0.0099 Score=43.91 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=54.6
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.+...+|.+|+..|+|++|...++++.+.-+ ++. +++..-+.+|..++++.+|...|.+|+.+...-.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~~-------~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDP-----DYV-------GTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCT-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CcH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 3556788999999999999988888888722 222 5777788888889999999999998888766555
Q ss_pred Chh
Q 023037 217 HPR 219 (288)
Q Consensus 217 ~p~ 219 (288)
.+.
T Consensus 76 ~~~ 78 (100)
T 3ma5_A 76 TQK 78 (100)
T ss_dssp CHH
T ss_pred chh
Confidence 533
No 182
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.77 E-value=0.0066 Score=60.84 Aligned_cols=153 Identities=10% Similarity=0.013 Sum_probs=103.7
Q ss_pred HHcCCHHHHHHHHHHHH--------HHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhH
Q 023037 65 YRLGKYKEMMDAYREML--------TYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWF 136 (288)
Q Consensus 65 ~~~g~~~~~l~~~~~~l--------~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f 136 (288)
...|+++++++.+++.+ ... +.-..+....+.. +.. . .+++.....++.+ ++-. -...
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~a~~-----~~~-~-g~~~~A~~~~~~a---l~~~---p~~~ 467 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDF-SESVELPLMEVRA-----LLD-L-GDVAKATRKLDDL---AERV---GWRW 467 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CC-TTCSHHHHHHHHH-----HHH-H-TCHHHHHHHHHHH---HHHH---CCCH
T ss_pred ccccCHHHHHHHHHHhhhhccccccccc-ccchhHHHHHHHH-----HHh-c-CCHHHHHHHHHHH---hccC---cchH
Confidence 78899999999999988 322 2211111111110 100 0 1222333333333 3322 2234
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.....+|.+|+..|+|++|...++++.+.-+ ++. +.+..-+.+|..+|++.+ .+.|.+|+.+...-
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-----~~~-------~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~- 533 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDTFP-----GEL-------APKLALAATAELAGNTDE-HKFYQTVWSTNDGV- 533 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-----TCS-------HHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCh-------HHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch-
Confidence 5778999999999999999999999999832 232 677888999999999999 99999998875321
Q ss_pred ChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHh
Q 023037 217 HPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (288)
Q Consensus 217 ~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~ 250 (288)
+ .....-|.++...|+|+.|..+|-++.+
T Consensus 534 -~----~a~~~lg~~~~~~g~~~~A~~~~~~al~ 562 (681)
T 2pzi_A 534 -I----SAAFGLARARSAEGDRVGAVRTLDEVPP 562 (681)
T ss_dssp -H----HHHHHHHHHHHHTTCHHHHHHHHHTSCT
T ss_pred -H----HHHHHHHHHHHHcCCHHHHHHHHHhhcc
Confidence 2 2446668899999999999999887765
No 183
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.77 E-value=0.032 Score=51.25 Aligned_cols=160 Identities=9% Similarity=0.048 Sum_probs=99.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh-hhhhhHHHHHHHHHHH---
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSA-VTRNYSEKCINNIMDF--- 103 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~-v~ka~~~k~i~~ild~--- 103 (288)
..+|+++|++.+++.+..++..+ ...+...++.++.++|+.+.|.+.++.+...- +. + ..-...+-++.+.
T Consensus 112 ~~g~~eeAL~~l~~~i~~~~~~~--~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~-~d~~--~~~d~~l~~Laea~v~ 186 (310)
T 3mv2_B 112 ILGDLDKSLETCVEGIDNDEAEG--TTELLLLAIEVALLNNNVSTASTIFDNYTNAI-EDTV--SGDNEMILNLAESYIK 186 (310)
T ss_dssp HHTCHHHHHHHHHHHHTSSCSTT--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CHHH--HHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHhccCCCcC--cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-cccc--ccchHHHHHHHHHHHH
Confidence 36899999999999988754212 46788899999999999999999999886654 30 0 0001122222221
Q ss_pred hccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccC--------CCCCccc
Q 023037 104 VSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQR--------EDGTDDQ 175 (288)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~--------~~~~dDk 175 (288)
+....+ ..+.-+.+..+..+...+ |-...+-+. +++..|+|++|.+.++.+.+.-++ + +|.
T Consensus 187 l~~g~~----~~q~A~~~f~El~~~~p~---~~~~~lLln-~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p---~~~ 255 (310)
T 3mv2_B 187 FATNKE----TATSNFYYYEELSQTFPT---WKTQLGLLN-LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVL---YKP 255 (310)
T ss_dssp HHHTCS----TTTHHHHHHHHHHTTSCS---HHHHHHHHH-HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHS---SHH
T ss_pred HHhCCc----cHHHHHHHHHHHHHhCCC---cccHHHHHH-HHHHcCCHHHHHHHHHHHHHhcccccccccCCC---CCH
Confidence 111111 222223333443332222 323333333 899999999999999987765211 1 333
Q ss_pred cccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 176 KKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 176 ~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
+.++.-+-++..+|+ .+.+++.++....
T Consensus 256 -------~~LaN~i~l~~~lgk--~a~~l~~qL~~~~ 283 (310)
T 3mv2_B 256 -------TFLANQITLALMQGL--DTEDLTNQLVKLD 283 (310)
T ss_dssp -------HHHHHHHHHHHHTTC--TTHHHHHHHHHTT
T ss_pred -------HHHHHHHHHHHHhCh--HHHHHHHHHHHhC
Confidence 666667777777887 7788888877655
No 184
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.77 E-value=0.015 Score=48.44 Aligned_cols=116 Identities=11% Similarity=-0.034 Sum_probs=85.8
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc-cCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS-AIP 216 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~-~I~ 216 (288)
...++|+.++..|+|++|...+++..++.+..+..+...-...-..+|..-+.++..++++..|...|.+|+.+=| .+.
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e 92 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE 92 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence 4568899999999999999999999999766332110000012244999999999999999999999999999721 111
Q ss_pred C-hhHHHHHH----hhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 217 H-PRIMGIIR----ECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 217 ~-p~i~a~I~----~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
. |. -+.-- .--|..+...|+|+.|..+|-.|.+.-.+
T Consensus 93 ~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 93 LNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp TTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 1 31 11112 44688899999999999999999997654
No 185
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.76 E-value=0.0084 Score=52.97 Aligned_cols=88 Identities=14% Similarity=0.139 Sum_probs=56.3
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccC
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGS 107 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~ 107 (288)
..+++++|++.|.+.+..+++. ..++.++|.+|.+.|+++++++.+++.+..- +.
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~-------------------- 70 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLV----AVYYTNRALCYLKMQQPEQALADCRRALELD-GQ-------------------- 70 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TT--------------------
T ss_pred HcCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CC--------------------
Confidence 4567777777777777665532 2455677777777777777777666654432 21
Q ss_pred CCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhcc
Q 023037 108 ASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQ 167 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~ 167 (288)
......++|.+|...|+|++|...+++..+..+
T Consensus 71 ---------------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 71 ---------------------------SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp ---------------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 123445677777777777777777777776643
No 186
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.73 E-value=0.009 Score=45.02 Aligned_cols=68 Identities=16% Similarity=0.124 Sum_probs=55.6
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
....+...+|.+|...|+|++|...++++.+..+ ++ .+++..-+.+|..+|++.+|...|.+++....
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 92 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP-----NH-------QALRVFYAMVLYNLGRYEQGVELLLKIIAETS 92 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----Cc-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3446778899999999999999999999888822 22 47778889999999999999999999987754
No 187
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.67 E-value=0.055 Score=42.55 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=75.7
Q ss_pred HHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHh----hcCHHHHHHHHHHHHhhhccCCC
Q 023037 142 LCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTE----TKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 142 L~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~----~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
|+.+|...+.++++...+++.-+. ++. +.+..-+.+|.. .+|+.+|...|++|... .+
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~-------g~~-------~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~----g~ 92 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL-------NSG-------NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL----ND 92 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT-------TCH-------HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----TC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC-------CCH-------HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC----CC
Confidence 999999999999988888877665 443 566677888887 78999999999999765 34
Q ss_pred hhHHHHHHhhcchhhhh----hccHHHHHHHHHHHHhhhhhhCChhHHHHhH
Q 023037 218 PRIMGIIRECGGKMHMA----ERQWADAATDFFEAFKNYDEAGNQRRIQCLK 265 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~----ekdy~~A~syF~EaF~~y~e~g~~~a~~~LK 265 (288)
|.-+ ..-|.+|.. ++|+++|..+|-.|-+ .|++.+...|.
T Consensus 93 ~~a~----~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~----~g~~~A~~~l~ 136 (138)
T 1klx_A 93 QDGC----LILGYKQYAGKGVVKNEKQAVKTFEKACR----LGSEDACGILN 136 (138)
T ss_dssp HHHH----HHHHHHHHHTSSSCCCHHHHHHHHHHHHH----TTCHHHHHHC-
T ss_pred HHHH----HHHHHHHHCCCCCCcCHHHHHHHHHHHHH----CCCHHHHHHHh
Confidence 4333 233777777 9999999999999955 48888766553
No 188
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.65 E-value=0.011 Score=44.19 Aligned_cols=73 Identities=14% Similarity=0.066 Sum_probs=54.7
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhc
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~ 105 (288)
..+++++|++.|++++..+++. ..++..+|.+|...|+++++.++|++.+... +.........-+...+..++
T Consensus 31 ~~g~~~~A~~~~~~al~~~p~~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 31 EHEQFDAALPHLRAALDFDPTY----SVAWKWLGKTLQGQGDRAGARQAWESGLAAA-QSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-cccccHHHHHHHHHHHHHhc
Confidence 3578999999999999887643 3467899999999999999999999999887 55444444444444444443
No 189
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.63 E-value=0.012 Score=42.48 Aligned_cols=74 Identities=20% Similarity=0.366 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
.+++++|++.|+++++.+++... +++..+|.+|...|++++++++|++.+..- +.-.....-..+..+++.+..
T Consensus 13 ~~~~~~A~~~~~~al~~~p~~~~---~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~a~~~~~~ 86 (99)
T 2kc7_A 13 QGDIENALQALEEFLQTEPVGKD---EAYYLMGNAYRKLGDWQKALNNYQSAIELN-PDSPALQARKMVMDILNFYNK 86 (99)
T ss_dssp HTCHHHHHHHHHHHHHHCSSTHH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTHHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHHCCCcHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHH
Confidence 47899999999999988764321 378899999999999999999999999887 665544433444455555543
No 190
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.53 E-value=0.091 Score=50.95 Aligned_cols=171 Identities=12% Similarity=0.114 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh-
Q 023037 55 KALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER- 133 (288)
Q Consensus 55 kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner- 133 (288)
..++.++..+++.|+.++|++++.++..- .+. -..-+.+.+|..++.............++.+.+.++......
T Consensus 27 ~~l~~~id~c~k~G~~~~A~~lf~~M~~~---Gv~--pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~ 101 (501)
T 4g26_A 27 ALLKQKLDMCSKKGDVLEALRLYDEARRN---GVQ--LSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKV 101 (501)
T ss_dssp HHHHHHHHHTTTSCCHHHHHHHHHHHHHH---TCC--CCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHc---CCC--CCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCC
Confidence 34677889999999999999999988652 111 123467888888775421000011112233333333332221
Q ss_pred -hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 134 -LWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 134 -~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
-...+..-|+..|...|+.++|..+++++++.--.| | +..|..-+..|...|+..+|..++..-...
T Consensus 102 ~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P----d-------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~- 169 (501)
T 4g26_A 102 VPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP----R-------LRSYGPALFGFCRKGDADKAYEVDAHMVES- 169 (501)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC----C-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC----c-------cceehHHHHHHHHCCCHHHHHHHHHHHHhc-
Confidence 123567789999999999999999999998762222 2 256788889999999999999999887543
Q ss_pred ccCCC-hhHHHHHHhhcchhhhhhccHHHHHHHHHH
Q 023037 213 SAIPH-PRIMGIIRECGGKMHMAERQWADAATDFFE 247 (288)
Q Consensus 213 ~~I~~-p~i~a~I~~~~G~l~~~ekdy~~A~syF~E 247 (288)
.-.|+ ....+.|+- ++..|++++|...|-+
T Consensus 170 G~~Pd~~ty~~Li~~-----~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 170 EVVPEEPELAALLKV-----SMDTKNADKVYKTLQR 200 (501)
T ss_dssp TCCCCHHHHHHHHHH-----HHHTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH-----HhhCCCHHHHHHHHHH
Confidence 33444 455555554 5688999999888765
No 191
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.48 E-value=0.011 Score=53.92 Aligned_cols=110 Identities=11% Similarity=-0.097 Sum_probs=80.7
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCC-----CccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG-----TDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~-----~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
.....+|..++..|+|.+|...+++..+..+.... ..+.....+...++..-+.+|..++++.+|...|.+|+.+
T Consensus 180 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 180 DRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 44568999999999999999999998887432100 0000000122358889999999999999999999999987
Q ss_pred hccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 212 KSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 212 a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
... ++ .....-|.+|+..++|+.|..+|-.+.+..
T Consensus 260 ~p~--~~----~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 260 EEK--NP----KALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp CTT--CH----HHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred CCC--CH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 421 12 334567899999999999999999998754
No 192
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.46 E-value=0.044 Score=40.70 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHH
Q 023037 183 EVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQ 262 (288)
Q Consensus 183 Ev~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~ 262 (288)
.++..-+.+|...+++.+|...|.+++.+...- +.....-|.+|...|+|+.|..+|-++.+.....|+.....
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 93 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY------SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVK 93 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHH
Confidence 678888999999999999999999999875321 22345668999999999999999999999988888876655
Q ss_pred HhH
Q 023037 263 CLK 265 (288)
Q Consensus 263 ~LK 265 (288)
-+.
T Consensus 94 ~l~ 96 (115)
T 2kat_A 94 ELQ 96 (115)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 193
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.37 E-value=0.0094 Score=57.25 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=80.0
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
....+|..++..|+|++|...++++.+..+ ++ .+++..-+.+|..++++.+|...|.+|+.+.
T Consensus 8 ~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p-----~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~----- 70 (477)
T 1wao_1 8 ELKTQANDYFKAKDYENAIKFYSQAIELNP-----SN-------AIYYGNRSLAYLRTECYGYALGDATRAIELD----- 70 (477)
T ss_dssp TSSSSSSSTTTTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-----
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCC-----cc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----
Confidence 445788899999999999999999998821 12 4788889999999999999999999999873
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
|.. +.....-|.+|...++|+.|..+|-+|.+..
T Consensus 71 p~~-~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 71 KKY-IKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp TTC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 322 2344556899999999999999999998864
No 194
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.36 E-value=0.11 Score=45.70 Aligned_cols=166 Identities=8% Similarity=-0.044 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhh-h
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN-E 132 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~n-e 132 (288)
..++..++..+...|+++++.+.|++.+..- |.-..+. ..+-..+.. . ++. +.+...++.+-. .
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~-----~~la~~~~~-~-g~~-------~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLS-NQNGEIG-----LLLAETLIA-L-NRS-------EDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TSCHHHH-----HHHHHHHHH-T-TCH-------HHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhC-CcchhHH-----HHHHHHHHH-C-CCH-------HHHHHHHHhCchhh
Confidence 3567899999999999999999999998877 6433222 211111111 1 112 222333332211 1
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
....-..+..+..+.+.+++.++...+++....-+ ++. +++..-+.+|...|++.+|.+.|..++...
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P-----~~~-------~~~~~la~~l~~~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENP-----EDA-------ALATQLALQLHQVGRNEEALELLFGHLRXD 249 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCT-----TCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCC-----ccH-------HHHHHHHHHHHHcccHHHHHHHHHHHHhcc
Confidence 12224455667778888888888887777777621 333 778888999999999999999999998875
Q ss_pred ccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHh
Q 023037 213 SAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (288)
Q Consensus 213 ~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~ 250 (288)
..-.. +..+..-|.++...|+...|...|-.++.
T Consensus 250 p~~~~----~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 250 LTAAD----GQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp TTGGG----GHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccccc----chHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 43311 22334445566666666666666655543
No 195
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.32 E-value=0.032 Score=38.89 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=53.8
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
......+|.++...|+|++|...+++..+..+ ++ .+++..-+.+|...+++.+|...|.++..+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-----~~-------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-----NN-------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC-----CC-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 35667889999999999999999999988722 22 3677788899999999999999999998874
No 196
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.28 E-value=0.034 Score=39.95 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=53.3
Q ss_pred hhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 139 NLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLE-VYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 139 ~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llE-v~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
.+++|..++..|+|++|...++++.+..+ ++ .+ ++..-+.+|..++++.+|...|.+++....
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p-----~~-------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEP-----VG-------KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCS-----ST-------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC-----Cc-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 35789999999999999999999988721 22 25 888889999999999999999999988754
No 197
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.24 E-value=0.15 Score=48.49 Aligned_cols=161 Identities=11% Similarity=0.083 Sum_probs=105.9
Q ss_pred CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 29 ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
.+++++|.+.|+++++.++.... .+..+.+.++.+.|+++++.++|++.+... +.-.......+ .++... .
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~-~~~~~~~~~~a---~~~~~~--~ 404 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPT---LVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAA---LMEYYC--S 404 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-TCCTHHHHHHH---HHHHHH--T
T ss_pred cCCHHHHHHHHHHHhCccccCch---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcc-CCchHHHHHHH---HHHHHH--c
Confidence 46889999999999998764321 366788899999999999999999998754 32212222111 122111 1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
++.+.....++.+++. ..+. ..+-+.++.++...|++++|..+++.....++.. . ....+++..=
T Consensus 405 -~~~~~A~~~~e~al~~---~p~~---~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~-----~---~~~~~lw~~~ 469 (530)
T 2ooe_A 405 -KDKSVAFKIFELGLKK---YGDI---PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLP-----P---EKSGEIWARF 469 (530)
T ss_dssp -CCHHHHHHHHHHHHHH---HTTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSC-----G---GGCHHHHHHH
T ss_pred -CChhHHHHHHHHHHHH---CCCC---HHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCC-----H---HHHHHHHHHH
Confidence 2344555555555543 2222 2444788999999999999999999998875432 1 1122344444
Q ss_pred HHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 189 IQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
+++....||...++.++.+++..-.
T Consensus 470 ~~~e~~~G~~~~~~~~~~r~~~~~p 494 (530)
T 2ooe_A 470 LAFESNIGDLASILKVEKRRFTAFR 494 (530)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHTH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 5555667999999999999876543
No 198
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.14 Score=36.86 Aligned_cols=71 Identities=7% Similarity=0.043 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCCh
Q 023037 182 LEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQ 258 (288)
Q Consensus 182 lEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~ 258 (288)
.+.+...+.+|...+++.+|...|.+|+.+... +| .+...-|.++...|+|+.|..+|-++.+.....+++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 74 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ--NP----VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHV 74 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--CH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHH
Confidence 467888899999999999999999999987432 13 345667999999999999999999999876555443
No 199
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.84 E-value=0.37 Score=45.58 Aligned_cols=142 Identities=10% Similarity=0.125 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHhhcCCc-cchhhHHHH-H-HHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhc
Q 023037 29 ETDPEGALAGFAEVVAMEP-EKAEWGFKA-L-KQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVS 105 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~-e~~~~~~ka-l-~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~ 105 (288)
.++.+.-++...+.++-.. ++.-| .+- + -.|+++|...|+|.++++.+++++..+ ..+
T Consensus 72 ~~~~~~~~~~~~~~~~~a~~~~r~f-lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~-~~~----------------- 132 (394)
T 3txn_A 72 DAGTGIEVQLCKDCIEWAKQEKRTF-LRQSLEARLIALYFDTALYTEALALGAQLLREL-KKL----------------- 132 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TTS-----------------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-hcc-----------------
Confidence 3445555666666665432 23334 343 2 379999999999999999999999888 321
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHH
Q 023037 106 GSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVY 185 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~ 185 (288)
++ ....+.+.+--+.+|...|++.++...+...++...... -|+ .....+.
T Consensus 133 --dd----------------------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p---~i~a~i~ 183 (394)
T 3txn_A 133 --DD----------------------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPP---KVQGALD 183 (394)
T ss_dssp --SC----------------------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCH---HHHHHHH
T ss_pred --cc----------------------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCH---HHHHHHH
Confidence 11 122234555567788999999999999999988844321 233 5678888
Q ss_pred HHHHHHHH-hhcCHHHHHHHHHHHHhhhccCCCh
Q 023037 186 AIEIQMYT-ETKNNKKLKQLYQKALAIKSAIPHP 218 (288)
Q Consensus 186 ~lE~~~y~-~~~n~~kak~~y~~A~~~a~~I~~p 218 (288)
..-+.+|. ..+||.+|-..+..|...-+++..|
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~ 217 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEGFDSVDSV 217 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhcccccccH
Confidence 99999999 8999999999999987655555555
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.76 E-value=0.082 Score=39.55 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=62.5
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.-.+.||..+++.|+|..|..-+++..+..+..+. .+....+|+..-+..|..+|++.+|...+..|+.....
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-----~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~-- 78 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-----STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE-- 78 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-----CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-----CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC--
Confidence 34578999999999999999999998887544321 12455688888899999999999999999999876432
Q ss_pred ChhHHHHH
Q 023037 217 HPRIMGII 224 (288)
Q Consensus 217 ~p~i~a~I 224 (288)
||.+....
T Consensus 79 ~~~~~~n~ 86 (104)
T 2v5f_A 79 HQRANGNL 86 (104)
T ss_dssp CHHHHHHH
T ss_pred CHHHHhhH
Confidence 25554443
No 201
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.68 E-value=0.058 Score=48.88 Aligned_cols=96 Identities=13% Similarity=0.123 Sum_probs=77.5
Q ss_pred hhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC
Q 023037 138 TNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH 217 (288)
Q Consensus 138 ~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~ 217 (288)
+.+-++.++.+.|+|++|.+++..+... +.. .. ++..-+-+|+..++++.+...++.+ ...++
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~-------~p~---~~---~~~~~a~l~~~~~r~~dA~~~l~~a----~~~~d 166 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVA-------GSE---HL---VAWMKAVVYGAAERWTDVIDQVKSA----GKWPD 166 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCT-------TCH---HH---HHHHHHHHHHHTTCHHHHHHHHTTG----GGCSC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc-------CCc---hH---HHHHHHHHHHHcCCHHHHHHHHHHh----hccCC
Confidence 4455889999999999999999887653 111 11 5666667999999999999999844 33457
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHh
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFFEAFK 250 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~ 250 (288)
|...+.+....|..+...|++..|..+|-++..
T Consensus 167 ~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 167 KFLAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 887788999999999999999999999998864
No 202
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.49 E-value=0.16 Score=35.18 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=55.1
Q ss_pred chHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 179 SQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 179 ~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..-.+++...+.+|...+++.+|...|.+++..... +| .+...-|.++...++|+.|..+|-++.+..
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~--~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN--NA----EAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC--CH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 344578888899999999999999999999986422 12 344566889999999999999999998753
No 203
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.49 E-value=0.17 Score=39.63 Aligned_cols=110 Identities=10% Similarity=0.015 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCC
Q 023037 30 TDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSAS 109 (288)
Q Consensus 30 ~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~ 109 (288)
.|+++|++.|++..+.... .|. |+.+|...+..++++++|++....-
T Consensus 9 ~d~~~A~~~~~~aa~~g~~------~a~--lg~~y~~g~~~~~A~~~~~~Aa~~g------------------------- 55 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM------FGC--LSLVSNSQINKQKLFQYLSKACELN------------------------- 55 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT------THH--HHHHTCTTSCHHHHHHHHHHHHHTT-------------------------
T ss_pred cCHHHHHHHHHHHHcCCCH------hhh--HHHHHHcCCCHHHHHHHHHHHHcCC-------------------------
Confidence 4678889999888765421 122 8888888778887766666553221
Q ss_pred cchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh----hcchhHHHHHHHHHHHhccCCCCCccccccchHHHHH
Q 023037 110 QNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD----MGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVY 185 (288)
Q Consensus 110 ~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~----~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~ 185 (288)
......+|+.+|.. .+++.++...+++.-+. .+. +.+
T Consensus 56 -------------------------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~~-------~a~ 96 (138)
T 1klx_A 56 -------------------------SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------NDQ-------DGC 96 (138)
T ss_dssp -------------------------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------TCH-------HHH
T ss_pred -------------------------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------CCH-------HHH
Confidence 11234567777777 77888887777776554 333 455
Q ss_pred HHHHHHHHh----hcCHHHHHHHHHHHHhh
Q 023037 186 AIEIQMYTE----TKNNKKLKQLYQKALAI 211 (288)
Q Consensus 186 ~lE~~~y~~----~~n~~kak~~y~~A~~~ 211 (288)
..-+.+|.. .+|+.+|...|.+|...
T Consensus 97 ~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 97 LILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 566777777 77888888888887655
No 204
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.24 E-value=0.73 Score=50.50 Aligned_cols=51 Identities=8% Similarity=0.057 Sum_probs=29.6
Q ss_pred hHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 141 kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
++|..+.+.|+|.+|..+.+.... |.--...|..+|++..|.+++.+|...
T Consensus 1200 ~iGd~le~eg~YeeA~~~Y~kA~n--------------------y~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1200 QVGDRCYDEKMYDAAKLLYNNVSN--------------------FGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHHHHhcCCHHHHHHHHHhhhH--------------------HHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 466666666666666666665421 233344555556677777777666433
No 205
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.23 E-value=0.14 Score=48.49 Aligned_cols=107 Identities=8% Similarity=0.005 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNER 133 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner 133 (288)
.++...+|++|.+.|++++|++.|.+++.+. .. ++.+.+-+++.|==.+ ...++..+...+..+...+...++..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~-~~-~~~kid~~l~~irl~l---~~~d~~~~~~~~~ka~~~~~~~~d~~ 205 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKA-IS-TGAKIDVMLTIARLGF---FYNDQLYVKEKLEAVNSMIEKGGDWE 205 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHH-TC-CCSHHHHHHHHHHHHH---HHTCHHHHHHHHHHHHHHHTTCCCTH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-CC-hHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHhhhcCCCHH
Confidence 5688899999999999999999999999887 32 2333332222211111 01234455555555555444444444
Q ss_pred hhHHhhhhHHHHHhhhcchhHHHHHHHHHHHh
Q 023037 134 LWFKTNLKLCKIWFDMGEYGRMSKILKELHKS 165 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~ 165 (288)
+.-++..--|..++..++|.+|...+-++-..
T Consensus 206 ~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 206 RRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 44455555555555555555555555554433
No 206
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.16 E-value=0.15 Score=42.73 Aligned_cols=102 Identities=12% Similarity=0.026 Sum_probs=76.6
Q ss_pred hhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-h
Q 023037 140 LKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-P 218 (288)
Q Consensus 140 ~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p 218 (288)
+.-+..+++.|.|+.+..+..-+..+.+..+ |-.-...-.++...-+..++..+||.+|...|.+|+.....++- |
T Consensus 24 ~dqik~L~d~~LY~sA~~La~lLlSl~~~~~---~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 24 IDHVRDMAAAGLHSNVRLLSSLLLTLSNNNP---ELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCc---ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3445678899999999999888888854332 11112566899999999999999999999999999888877654 3
Q ss_pred hH------------------HHHHHhhcchhhhhhccHHHHHHH
Q 023037 219 RI------------------MGIIRECGGKMHMAERQWADAATD 244 (288)
Q Consensus 219 ~i------------------~a~I~~~~G~l~~~ekdy~~A~sy 244 (288)
.. -.+++.-.++-|+..|+++.|.+.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~ 144 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAI 144 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHH
Confidence 21 126777778888888888888887
No 207
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.58 E-value=1.7 Score=41.80 Aligned_cols=157 Identities=11% Similarity=0.060 Sum_probs=102.5
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGK---------YKEMMDAYREMLTYIKSAVTRNYSEKCIN 98 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~---------~~~~l~~~~~~l~~~~~~v~ka~~~k~i~ 98 (288)
+.++.++|++.|.+..+..-.... .++..|+..+.+.+. .+.+.+++.++..- .+. -...+.+
T Consensus 38 k~G~~~~A~~lf~~M~~~Gv~pd~---~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~---G~~--Pd~~tyn 109 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNGVQLSQ---YHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD---KVV--PNEATFT 109 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHTCCCCH---HHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT---TCC--CCHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcCCCCCH---hHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh---CCC--CCHHHHH
Confidence 689999999999998765321112 334556666665544 56777777776432 111 1334677
Q ss_pred HHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh--hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCcccc
Q 023037 99 NIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQK 176 (288)
Q Consensus 99 ~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne--r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~ 176 (288)
.+|+.+..... . +.+.+.++..... .-...+..-+...|...|+.++|.+++++..+.=-.| |
T Consensus 110 ~lI~~~~~~g~--~-------~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~P----d-- 174 (501)
T 4g26_A 110 NGARLAVAKDD--P-------EMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVP----E-- 174 (501)
T ss_dssp HHHHHHHHHTC--H-------HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCC----C--
T ss_pred HHHHHHHhcCC--H-------HHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCC----C--
Confidence 78887765432 2 2233333332222 1233667788999999999999999999998762222 2
Q ss_pred ccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 177 KGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 177 ~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
...|..-+..|...|+..+|.+++..-+...
T Consensus 175 -----~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g 205 (501)
T 4g26_A 175 -----EPELAALLKVSMDTKNADKVYKTLQRLRDLV 205 (501)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHhhCCCHHHHHHHHHHHHHhC
Confidence 2567888899999999999999999876543
No 208
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=94.46 E-value=0.33 Score=36.09 Aligned_cols=79 Identities=9% Similarity=-0.143 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCC-hhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhhhCChhHHHH
Q 023037 185 YAIEIQMYTETKNNKKLKQLYQKALAIKSAIPH-PRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQC 263 (288)
Q Consensus 185 ~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~-p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e~g~~~a~~~ 263 (288)
..--++.++..+++.+|..-|..|+.....-.. +...+.|...-|..+...|+++.|..++-++.+. ..+++.+...
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l--~P~~~~~~~n 85 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL--DPEHQRANGN 85 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--CCCCHHHHhh
Confidence 345688999999999999999999987643322 2345577788999999999999999999999873 3455666666
Q ss_pred hH
Q 023037 264 LK 265 (288)
Q Consensus 264 LK 265 (288)
++
T Consensus 86 ~~ 87 (104)
T 2v5f_A 86 LK 87 (104)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 209
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.42 E-value=0.46 Score=45.30 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
..+....|+++|...|++.+|.+.+..+..-. .+..+ .
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et-------------------~~~~~-----------------------~ 173 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVET-------------------YGSME-----------------------M 173 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-------------------CSSSC-----------------------H
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-------------------Hhccc-----------------------H
Confidence 45667789999999999999999998885433 11111 1
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHH-hccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHK-SCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk-~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
+.-..+.+....+|+..++|.+|..+++.+.. ....+ .+. .+.+..+..-+++|...++|..|-..|..+...
T Consensus 174 ~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~---~~~---~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 174 SEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNP---KYE---SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSS---CCH---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccC---CcH---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 11223445677889999999999999999864 33322 233 677899999999999999999999999988776
Q ss_pred hccCCCh
Q 023037 212 KSAIPHP 218 (288)
Q Consensus 212 a~~I~~p 218 (288)
.+...+|
T Consensus 248 ~~~~~d~ 254 (445)
T 4b4t_P 248 DAIKSDE 254 (445)
T ss_dssp HHHHSCH
T ss_pred ccccCCH
Confidence 6555553
No 210
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.50 E-value=0.17 Score=37.55 Aligned_cols=50 Identities=14% Similarity=0.135 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 023037 31 DPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 31 d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
.+++|...|++.+..+++ .-+++..+|.+++++|+|+++++++++++...
T Consensus 24 ~~~~A~~~l~~AL~~dp~----~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPY----NEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CCHHHHHHHHHHHHHCTT----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHCcC----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 368999999999998764 34688899999999999999999999998776
No 211
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.17 E-value=0.13 Score=49.66 Aligned_cols=20 Identities=10% Similarity=0.021 Sum_probs=15.0
Q ss_pred hhhhhhccHHHHHHHHHHHH
Q 023037 230 KMHMAERQWADAATDFFEAF 249 (288)
Q Consensus 230 ~l~~~ekdy~~A~syF~EaF 249 (288)
.+|...|.|+.|.++|..|.
T Consensus 215 ~~Yek~G~~eEai~lLe~aL 234 (449)
T 1b89_A 215 NYYQDRGYFEELITMLEAAL 234 (449)
T ss_dssp HHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHHHh
Confidence 45667788888888887774
No 212
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=92.49 E-value=0.67 Score=38.73 Aligned_cols=115 Identities=11% Similarity=0.113 Sum_probs=68.0
Q ss_pred CCCHHHHHHHHHHhhcC---Ccc--chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 023037 29 ETDPEGALAGFAEVVAM---EPE--KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDF 103 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~---~~e--~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~ 103 (288)
.+-++.|+-...-++.. +++ ...+.+.++..+|..++.+|+|..|..+|++.+.+- ..++|+...++-..+
T Consensus 33 ~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~-k~l~k~~s~~~~~~~--- 108 (167)
T 3ffl_A 33 AGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK-KALSKTSKVRPSTGN--- 108 (167)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HCC---------------
T ss_pred hhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-HHHhcCCCccccccc---
Confidence 34566666666655543 233 478899999999999999999999999999999999 777777765321110
Q ss_pred hccCCC--cchhhHHHHH------------HHHHHHHHHhhhhhhhHHhhhhHHHHHh
Q 023037 104 VSGSAS--QNFSLLREFY------------QTTLKALEEAKNERLWFKTNLKLCKIWF 147 (288)
Q Consensus 104 ~~~~~~--~~~~~~~~~~------------~~~l~~i~~a~ner~~f~~~~kL~~lyl 147 (288)
-+..|+ ......+--| +.++..++.-..+.|+.++++=||+||-
T Consensus 109 ~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 109 SASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMLLANLYK 166 (167)
T ss_dssp --------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGGCCHHHHHHHHHHCC
T ss_pred cCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCchhcCHHHHHHHHHHhc
Confidence 011111 0011112222 3344444444467888899999999873
No 213
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=92.36 E-value=5.3 Score=34.96 Aligned_cols=54 Identities=17% Similarity=0.050 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhhhc---cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 198 NKKLKQLYQKALAIKS---AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~---~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
..++..+|..|..++. .-+||--.|..-..+=-.|---++-+.|+.---+||+.
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~ 202 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 202 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4578999999999986 35569888988777655444567777777766666653
No 214
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=92.17 E-value=0.73 Score=36.69 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=56.4
Q ss_pred HHHHHHhhccc-CCCCHHH---HHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 023037 17 RVLCSILEKGL-VETDPEG---ALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNY 92 (288)
Q Consensus 17 ~~~~y~~ak~~-~~~d~~~---Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~ 92 (288)
.-..|--|-++ ...+|.. +|.++..++..+. ..-.-.+++.|+.-+++.|+|++++++...+|..= |. |.
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~--p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~e-P~---n~ 108 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGS--KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE-PQ---NN 108 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSC--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC--cchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-CC---CH
Confidence 33444444444 4555654 9999999998752 22345899999999999999999999999999876 64 33
Q ss_pred HHHHHHHHHH
Q 023037 93 SEKCINNIMD 102 (288)
Q Consensus 93 ~~k~i~~ild 102 (288)
-+..++.+|+
T Consensus 109 QA~~Lk~~i~ 118 (126)
T 1nzn_A 109 QAKELERLID 118 (126)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444554443
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=91.87 E-value=0.27 Score=40.48 Aligned_cols=53 Identities=17% Similarity=0.134 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHhhcCC-ccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh
Q 023037 31 DPEGALAGFAEVVAME-PEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSA 87 (288)
Q Consensus 31 d~~~Al~~f~~ii~~~-~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~ 87 (288)
+.++++..|+.+++.+ |+ -.-.++++|+..|++.|+|+++++++..++..= |.
T Consensus 50 ~~~~gI~lLe~ll~~~~p~---~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie-P~ 103 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKE---EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE-PQ 103 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHH---HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHHHHhcCCcc---chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CC
Confidence 3359999999999875 32 245799999999999999999999999999887 64
No 216
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=91.41 E-value=0.18 Score=41.72 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHhh
Q 023037 32 PEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLG-----------KYKEMMDAYREMLTYIKSA 87 (288)
Q Consensus 32 ~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g-----------~~~~~l~~~~~~l~~~~~~ 87 (288)
+++|+..|++.+..+++. ..++.++|.+|.++| ++++++++|++.+.+- |.
T Consensus 62 ~~eAi~~le~AL~ldP~~----~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~-P~ 123 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKK----DEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ-PD 123 (158)
T ss_dssp HHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHHHHhCcCc----HHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC-CC
Confidence 679999999999988753 457789999999885 8899999998888776 53
No 217
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=90.72 E-value=7.9 Score=33.74 Aligned_cols=173 Identities=12% Similarity=0.079 Sum_probs=96.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH---HHhh---hhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHh--
Q 023037 58 KQTVKLYYRLGKYKEMMDAYREMLTY---IKSA---VTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEA-- 129 (288)
Q Consensus 58 ~~l~~l~~~~g~~~~~l~~~~~~l~~---~~~~---v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a-- 129 (288)
.+++++.-+.++|++|.++.+++..- ..+. --||-..-+.+|++..-..+ +..+. .++..
T Consensus 10 ~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~s----wRiis--------siEqkek 77 (227)
T 2o8p_A 10 KYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTM----TSQVL--------QEQTKQL 77 (227)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHH----HHHHH--------HHHHHSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHH----HHHHH--------HHHHHHc
Confidence 47899999999999999999998872 2122 23666666666666543311 11111 11111
Q ss_pred hhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHH-----HhhcCHHHHHHH
Q 023037 130 KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMY-----TETKNNKKLKQL 204 (288)
Q Consensus 130 ~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y-----~~~~n~~kak~~ 204 (288)
+++ -...++.-|..+ --.++..+..++..+++.-=-.... .-+--+-+-+.+| +..|+..++..+
T Consensus 78 ~~~-----~~~~~i~~yr~k-ie~EL~~iC~dil~lld~~Lip~aE----skVFY~KMKGDYyRYlAE~~~g~~e~a~~a 147 (227)
T 2o8p_A 78 NND-----ELVKICSEYVFS-LRKDIKAFLQSFEDCVDRLVEKSFF----SKFFKLKVKSDISRYKLEFGLCSLEDSKKI 147 (227)
T ss_dssp SCH-----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTCCCCSHH----HHHHHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCH-----HHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhccCcHH----HHHHHHHHhhhHHHHHHHHccccHHHHHHH
Confidence 111 111222222211 1122333444444432210000000 0011122222222 234567899999
Q ss_pred HHHHHhhhcc---CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 205 YQKALAIKSA---IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 205 y~~A~~~a~~---I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
|..|..+++. -+||--.|..-..|=-.|=-.++-+.|+.---+||+..
T Consensus 148 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 148 HQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9999999973 45698899888777665557889999999999999963
No 218
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.72 E-value=1.6 Score=32.13 Aligned_cols=66 Identities=11% Similarity=0.138 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhcC---HHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 183 EVYAIEIQMYTETKN---NKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 183 Ev~~lE~~~y~~~~n---~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
+++..-.++++..++ .++++.++.+|+.+... ||+.. ...|.+++..|+|+.|..++-..++.-.+
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~--~~rA~----~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY--NEAAL----SLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT--CHHHH----HHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC--CHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 677777777765655 79999999999986543 23322 22399999999999999999999886544
No 219
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=89.53 E-value=11 Score=33.52 Aligned_cols=55 Identities=18% Similarity=0.085 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhhhc---cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 198 NKKLKQLYQKALAIKS---AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~---~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..++..+|..|..++. .-+||--.|..-..+=-.|--.++-+.|+.---+||+..
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 4568999999999986 355698889887776554445678888877777666544
No 220
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=89.34 E-value=11 Score=33.43 Aligned_cols=55 Identities=16% Similarity=0.070 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhhcc--CCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 198 NKKLKQLYQKALAIKSA--IPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~~--I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..++..+|..|..+++. -+||--.|..-..+=-.|--.++-+.|+.---+||+..
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45689999999999842 44598888887776554445678888877766666543
No 221
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=89.28 E-value=2.1 Score=35.21 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhh-hhhhhHHhhhhHHHHHhhhcchh----------HHHHHHHHHHHhccCCCCCccccccchHHHH
Q 023037 116 REFYQTTLKALEEAK-NERLWFKTNLKLCKIWFDMGEYG----------RMSKILKELHKSCQREDGTDDQKKGSQLLEV 184 (288)
Q Consensus 116 ~~~~~~~l~~i~~a~-ner~~f~~~~kL~~lyl~~~~y~----------~~~~ll~elkk~~~~~~~~dDk~~~~~llEv 184 (288)
..+++.+.++.+.+- -.-......++++.++.+.++++ +|...+++..++ +.+ ..+.
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-------dP~-----~~~A 82 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-------DPK-----KDEA 82 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-------CTT-----CHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-------CcC-----cHHH
Confidence 344454444444332 11223356778888999988765 888888888888 221 2477
Q ss_pred HHHHHHHHHhhc-----------CHHHHHHHHHHHHhhhc
Q 023037 185 YAIEIQMYTETK-----------NNKKLKQLYQKALAIKS 213 (288)
Q Consensus 185 ~~lE~~~y~~~~-----------n~~kak~~y~~A~~~a~ 213 (288)
+..-+.+|+.++ ++.+|..+|.+|+.+.-
T Consensus 83 ~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P 122 (158)
T 1zu2_A 83 VWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQP 122 (158)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCC
Confidence 888899998875 89999999999988764
No 222
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=89.18 E-value=16 Score=36.66 Aligned_cols=158 Identities=11% Similarity=0.030 Sum_probs=90.8
Q ss_pred CHHHHH-HHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhh-------hhh---------hH
Q 023037 31 DPEGAL-AGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV-------TRN---------YS 93 (288)
Q Consensus 31 d~~~Al-~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v-------~ka---------~~ 93 (288)
+.++|. +.|++.+...|.. ..-..+.+.+..+.|+++.+.++|..++..+...+ +.+ ..
T Consensus 358 ~~~~a~r~il~rAi~~~P~s----~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~ 433 (679)
T 4e6h_A 358 TDSTVITKYLKLGQQCIPNS----AVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKL 433 (679)
T ss_dssp CCTTHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccch
Confidence 445665 7777777644422 12234677888899999999999999988652111 110 01
Q ss_pred HHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh--hhhHHhhhhHHHHHhhhc-chhHHHHHHHHHHHhccCCC
Q 023037 94 EKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE--RLWFKTNLKLCKIWFDMG-EYGRMSKILKELHKSCQRED 170 (288)
Q Consensus 94 ~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne--r~~f~~~~kL~~lyl~~~-~y~~~~~ll~elkk~~~~~~ 170 (288)
.++....++..... .+ ++.+...++.|... +....+.+..|.+-...+ +++.|..++....+.++.
T Consensus 434 ~~vWi~y~~~erR~--~~-------l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~-- 502 (679)
T 4e6h_A 434 TYVYCVYMNTMKRI--QG-------LAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFAT-- 502 (679)
T ss_dssp HHHHHHHHHHHHHH--HC-------HHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHc--CC-------HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC--
Confidence 11111111111100 11 23333334433222 222355566677766654 489999999999998763
Q ss_pred CCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhc
Q 023037 171 GTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKS 213 (288)
Q Consensus 171 ~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~ 213 (288)
+. .+++...-.| ...++..+||++|..|.+...
T Consensus 503 ---~~---~~w~~y~~fe----~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 503 ---DG---EYINKYLDFL----IYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp ---CH---HHHHHHHHHH----HHHTCHHHHHHHHHHHTTTSS
T ss_pred ---ch---HHHHHHHHHH----HhCCCHHHHHHHHHHHHHhcC
Confidence 44 4444443333 446899999999999876543
No 223
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=87.66 E-value=0.91 Score=36.55 Aligned_cols=80 Identities=11% Similarity=0.078 Sum_probs=55.7
Q ss_pred hHHHHHHhhccc-C---CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhh
Q 023037 16 SRVLCSILEKGL-V---ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRN 91 (288)
Q Consensus 16 ~~~~~y~~ak~~-~---~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka 91 (288)
+.-..|--|-++ + ..|...+|.++.+++..+++. .-.+++.|+.-+++.|+|+.|+.+...+|..= |. |
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~---~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e-P~---N 111 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR---RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE-RN---N 111 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC-TT---C
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch---hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC-CC---C
Confidence 333444444443 2 234468999999999865432 45799999999999999999999999988765 44 4
Q ss_pred hHHHHHHHHHH
Q 023037 92 YSEKCINNIMD 102 (288)
Q Consensus 92 ~~~k~i~~ild 102 (288)
.-+..++.+|+
T Consensus 112 ~QA~~Lk~~Ie 122 (134)
T 3o48_A 112 KQVGALKSMVE 122 (134)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555444
No 224
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=87.00 E-value=1.8 Score=41.52 Aligned_cols=93 Identities=12% Similarity=0.197 Sum_probs=50.8
Q ss_pred hHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhH
Q 023037 141 KLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRI 220 (288)
Q Consensus 141 kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i 220 (288)
.++.+|...|.++++..+++..... |+...| ...|. ...|.+ =+..|+.+.+. .-.+.|..|++
T Consensus 212 ~lv~~Yek~G~~eEai~lLe~aL~l-------e~ah~~-~ftel----~il~~k-y~p~k~~ehl~---~~~~~ini~k~ 275 (449)
T 1b89_A 212 ELINYYQDRGYFEELITMLEAALGL-------ERAHMG-MFTEL----AILYSK-FKPQKMREHLE---LFWSRVNIPKV 275 (449)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTS-------TTCCHH-HHHHH----HHHHHT-TCHHHHHHHHH---HHSTTSCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCC-------cHHHHH-HHHHH----HHHHHh-cCHHHHHHHHH---HHHHHhcCcHH
Confidence 4668888999999998888888777 544211 11222 222221 13444444333 22344555553
Q ss_pred HHH-----HHhhcchhhhhhccHHHHHHHHHHHH
Q 023037 221 MGI-----IRECGGKMHMAERQWADAATDFFEAF 249 (288)
Q Consensus 221 ~a~-----I~~~~G~l~~~ekdy~~A~syF~EaF 249 (288)
.-. +=.--.-+|.+.++|+.|..--.+.-
T Consensus 276 ~~~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~h~ 309 (449)
T 1b89_A 276 LRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHP 309 (449)
T ss_dssp HHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHhCC
Confidence 211 11112446778888888887666653
No 225
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=86.21 E-value=19 Score=32.63 Aligned_cols=172 Identities=7% Similarity=-0.080 Sum_probs=100.0
Q ss_pred cCCCCHHHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHh
Q 023037 27 LVETDPEGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFV 104 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~ 104 (288)
+.++|+=+|-+.++-+...-. .+-...-.-+.+-+..+.+.|++..+.++...++... ..-.....+..+.+|++.+
T Consensus 24 I~~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~-~~~~~~~~~~~~~rl~~l~ 102 (312)
T 2wpv_A 24 IKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVY-DLAEVKVDDISVARLVRLI 102 (312)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCCCSHHHHHHHHHHH
T ss_pred hhccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHH-HHcCCCCCHHHHHHHHHHH
Confidence 345666667777777665421 1222233445666677778888888888777777766 3333334566777777777
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHhhhh----hhhHHhhhhHHHHHhhhcchhHHHH------------HHHHHHHhccC
Q 023037 105 SGSASQNFSLLREFYQTTLKALEEAKNE----RLWFKTNLKLCKIWFDMGEYGRMSK------------ILKELHKSCQR 168 (288)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~l~~i~~a~ne----r~~f~~~~kL~~lyl~~~~y~~~~~------------ll~elkk~~~~ 168 (288)
+..|..++ .. .....++|.|+... ..--.+..-+|..|...|+|.+|.. +.+=+..+.+.
T Consensus 103 ~~~p~~~~-~r---~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~ 178 (312)
T 2wpv_A 103 AELDPSEP-NL---KDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQ 178 (312)
T ss_dssp TTCCTTCT-TH---HHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCc-hH---HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHh
Confidence 76553222 23 34455678888632 2233778888888888888888643 22223333222
Q ss_pred CCCCccccccchHHHHHHHHHH-HHHhhcCHHHHHHHHHHH
Q 023037 169 EDGTDDQKKGSQLLEVYAIEIQ-MYTETKNNKKLKQLYQKA 208 (288)
Q Consensus 169 ~~~~dDk~~~~~llEv~~lE~~-~y~~~~n~~kak~~y~~A 208 (288)
.+ ++. ..-.+.+....- -|..++|..-|+.++..-
T Consensus 179 ~~--~~~---~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f 214 (312)
T 2wpv_A 179 VD--DIE---DSTVAEFFSRLVFNYLFISNISFAHESKDIF 214 (312)
T ss_dssp TT--CCC---HHHHHHHHHHHHHHHHHTTBHHHHHHHHHHH
T ss_pred cC--CCC---cchHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 10 011 222455555532 456778998888887653
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=86.09 E-value=1.1 Score=36.44 Aligned_cols=81 Identities=11% Similarity=0.077 Sum_probs=56.5
Q ss_pred hhHHHHHHhhccc-C---CCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhh
Q 023037 15 VSRVLCSILEKGL-V---ETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTR 90 (288)
Q Consensus 15 ~~~~~~y~~ak~~-~---~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~k 90 (288)
|+.-..|--|-++ + ..|-..+|.+++.++..+++. +-.+++.|+.-+++.|+|++++.+...+|..= |.
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~---~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e-P~--- 109 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR---RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE-RN--- 109 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST---HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC-CC---
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc---hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC-CC---
Confidence 3444444444443 2 233468999999999865442 34789999999999999999999999998776 54
Q ss_pred hhHHHHHHHHHH
Q 023037 91 NYSEKCINNIMD 102 (288)
Q Consensus 91 a~~~k~i~~ild 102 (288)
|.-+..++.+|+
T Consensus 110 n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 110 NKQVGALKSMVE 121 (144)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 444555555554
No 227
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.30 E-value=4.5 Score=37.78 Aligned_cols=141 Identities=9% Similarity=0.102 Sum_probs=83.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhh---------
Q 023037 60 TVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAK--------- 130 (288)
Q Consensus 60 l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~--------- 130 (288)
|.+.+...+..+..+++|..++.-+...+++=+..+.+..+.+.. + +.+....+++.....+....
T Consensus 45 L~~~~~~~~~~~~~~~ly~~fi~~f~~kin~L~lv~~~~~~~~~~---~--d~~~al~~L~~~~~~~~~~~~~~~~~~~~ 119 (393)
T 4b4t_O 45 LTKFFDDAKSTPLRLRLYDNFVSKFYDKINQLSVVKYLLASLKDS---K--DFDESLKYLDDLKAQFQELDSKKQRNNGS 119 (393)
T ss_dssp THHHHCCCSSCCCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHT---T--CHHHHHHHHHHHTTTSHHHHSSCCCCCCS
T ss_pred HHHHHhChhcchHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc---C--CHHHHHHHHHHHHHHHhhhhhhhhcccch
Confidence 444444445556667888888877766666655544443323222 1 12233333332222221111
Q ss_pred --hhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 023037 131 --NERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKA 208 (288)
Q Consensus 131 --ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A 208 (288)
...-...+.+.++..|+..|+.++|..++++++..+...++. |. ..-.-+|-.-+++|...++++.+......+
T Consensus 120 ~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~-~~---~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~ 195 (393)
T 4b4t_O 120 KDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI-PL---RITNSFYSTNSQYFKFKNDFNSFYYTSLLY 195 (393)
T ss_dssp SSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS-SS---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc-cH---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 113345778899999999999999999999999998776433 22 344566666777877777776655443333
Q ss_pred H
Q 023037 209 L 209 (288)
Q Consensus 209 ~ 209 (288)
+
T Consensus 196 l 196 (393)
T 4b4t_O 196 L 196 (393)
T ss_dssp H
T ss_pred H
Confidence 3
No 228
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=85.20 E-value=20 Score=31.85 Aligned_cols=55 Identities=16% Similarity=0.036 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhhhc---cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 198 NKKLKQLYQKALAIKS---AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~---~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..++.++|..|..++. .-+||--.|..-..+=-.|=-.++-+.|+.---+||+..
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~A 229 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 229 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4568899999999885 345698899887776443434678788777766666543
No 229
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=84.86 E-value=6.4 Score=32.11 Aligned_cols=70 Identities=10% Similarity=-0.011 Sum_probs=54.1
Q ss_pred hhHHhhhhHHHHHhhhc---chhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHh
Q 023037 134 LWFKTNLKLCKIWFDMG---EYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~---~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~ 210 (288)
..-.+..++|-.+...+ +.+++..++.++.+. +++ ..--|.+-.-.-.|++++||.+|+..+..++.
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p---~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ 99 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSK---EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 99 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCH---HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCc---cchHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 34577888888998877 777899999999887 422 22346677778888899999999999998887
Q ss_pred hhc
Q 023037 211 IKS 213 (288)
Q Consensus 211 ~a~ 213 (288)
+..
T Consensus 100 ieP 102 (152)
T 1pc2_A 100 TEP 102 (152)
T ss_dssp HCT
T ss_pred cCC
Confidence 754
No 230
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=82.80 E-value=12 Score=34.63 Aligned_cols=137 Identities=10% Similarity=0.051 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhh
Q 023037 52 WGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKN 131 (288)
Q Consensus 52 ~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~n 131 (288)
+.|..+..-+.--...|+.+.+.+.+.+.+..++... +...++.. .... ... .-
T Consensus 113 ~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~---------------L~~~~~~~--w~~~----~r~-----~l 166 (388)
T 2ff4_A 113 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPV---------------LDDLRDFQ--FVEP----FAT-----AL 166 (388)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSST---------------TGGGTTST--THHH----HHH-----HH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCC---------------CCCCCchh--HHHH----HHH-----HH
Confidence 4566666666666667888888888888887774332 11111100 1110 000 11
Q ss_pred hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 132 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 132 er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
+.++..+-..++..++..|++.++...++.+...-+ -+. +.|..-+.+|+..|+...|.+.|..+++.
T Consensus 167 ~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P-----~~E-------~~~~~lm~al~~~Gr~~~Al~~y~~~r~~ 234 (388)
T 2ff4_A 167 VEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHP-----YRE-------PLWTQLITAYYLSDRQSDALGAYRRVKTT 234 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCH-------HHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-----CCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 234445667889999999999999888888876621 122 57889999999999999999999999875
Q ss_pred hc---cCCC-hhHHHHHHh
Q 023037 212 KS---AIPH-PRIMGIIRE 226 (288)
Q Consensus 212 a~---~I~~-p~i~a~I~~ 226 (288)
=. .+.- |.++...+.
T Consensus 235 L~~eLG~~P~~~l~~l~~~ 253 (388)
T 2ff4_A 235 LADDLGIDPGPTLRALNER 253 (388)
T ss_dssp HHHHHSCCCCHHHHHHHHH
T ss_pred HHHHhCCCCCHHHHHHHHH
Confidence 43 3433 777776655
No 231
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=77.94 E-value=46 Score=31.22 Aligned_cols=126 Identities=15% Similarity=0.184 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 53 GFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 53 ~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
+-.+..+-.+-....|+.+++.++|+.+.-.++.. .| ||+++ .+ .+..+...+....--+...++
T Consensus 102 kl~~~~~eL~~ai~~~dl~~a~~~YHklsyeikk~--------av--ll~RV---YG--~stRe~il~~fk~pA~~l~~~ 166 (412)
T 2ra1_A 102 KLDKMRQELKAAVDAKDLKKAEELYHKISYELKTR--------TV--ILDRV---YG--QSTRELLRSTFKADAQALRDR 166 (412)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--------TH--HHHTS---SC--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccHHHHHHHhhhhhHhhhhc--------EE--EEecc---cC--hhHHHHHHHHhhchHHHHHHH
Confidence 34444444455568899999999999887555332 11 34433 33 223322222222211111122
Q ss_pred ---hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 023037 133 ---RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKAL 209 (288)
Q Consensus 133 ---r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~ 209 (288)
-......++-+...++.|+.+++...+.++..+++.. +| .+..|+ ++....|+++|..+.
T Consensus 167 ~~y~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv---~d----~FkaeL----------~~aa~~a~~aYeaa~ 229 (412)
T 2ra1_A 167 LIYDITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKV---TD----AFKAEL----------QKAAQDAKAAYEAAL 229 (412)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGC---CS----TTHHHH----------HHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhh---hH----HHHHHH----------HHhhhhhhhhhcccc
Confidence 1222678889999999999999999999999999887 56 333333 234566778888775
Q ss_pred h
Q 023037 210 A 210 (288)
Q Consensus 210 ~ 210 (288)
+
T Consensus 230 t 230 (412)
T 2ra1_A 230 T 230 (412)
T ss_dssp C
T ss_pred C
Confidence 4
No 232
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=77.73 E-value=36 Score=29.90 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhhhc---cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 198 NKKLKQLYQKALAIKS---AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~---~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
..++..+|..|..++. .-+||--.|..-..+=-.|=-.++-+.|+.---+||+..
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~A 204 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDA 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4678999999999886 345698899887776444434677777777666665543
No 233
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=76.16 E-value=15 Score=30.27 Aligned_cols=88 Identities=18% Similarity=0.143 Sum_probs=67.4
Q ss_pred hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhh
Q 023037 132 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAI 211 (288)
Q Consensus 132 er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~ 211 (288)
-|+...+-++.|.+ .+.++.++|..+.+...+.|. .+ .-|+..=.+.-.+++|+.+||.++.+|.-.
T Consensus 57 wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hK-----------kF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~ 123 (161)
T 4h7y_A 57 NESFARIQVRFAEL-KAIQEPDDARDYFQMARANCK-----------KF-AFVHISFAQFELSQGNVKKSKQLLQKAVER 123 (161)
T ss_dssp CHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCT-----------TB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhH-----------HH-HHHHHHHHHHHHHcccHHHHHHHHHHHhcc
Confidence 35666788888855 788999999999999988733 34 678888888888999999999999999884
Q ss_pred hccCCC-hhHHHHHHhhcchhhh
Q 023037 212 KSAIPH-PRIMGIIRECGGKMHM 233 (288)
Q Consensus 212 a~~I~~-p~i~a~I~~~~G~l~~ 233 (288)
. ..+. -.=+|.=.+.+|+-+.
T Consensus 124 ~-~k~~~~le~a~~nl~~~~~~l 145 (161)
T 4h7y_A 124 G-AVPLEMLEIALRNLNLQKKQL 145 (161)
T ss_dssp T-CBCHHHHHHHHHHHHTTCSCS
T ss_pred C-CCcHHHHHHHHHhhhcCCCee
Confidence 3 2223 3345666778888764
No 234
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=70.71 E-value=53 Score=28.59 Aligned_cols=54 Identities=15% Similarity=0.115 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhhhc---cCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 198 NKKLKQLYQKALAIKS---AIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~---~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
..++.++|..|..++. .-+||--.|..-..+=-.|=-.++-+.|+.---+||+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~ 205 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDE 205 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4678999999999886 34569889988777654444667777777766666654
No 235
>3axj_A GM27569P, translin; translin/TRAX heterodimer, passenger RNA cleavage, RNAse, DN protein; 2.10A {Drosophila melanogaster} PDB: 2qva_A 2qrx_A 3riu_A
Probab=70.53 E-value=42 Score=29.36 Aligned_cols=54 Identities=17% Similarity=0.325 Sum_probs=40.5
Q ss_pred CCC-hhHHHHHHhhcchhhh-----hhccHHHHH------HHHHHHHhhhhhhCC--hhHHHHhHHHH
Q 023037 215 IPH-PRIMGIIRECGGKMHM-----AERQWADAA------TDFFEAFKNYDEAGN--QRRIQCLKYLV 268 (288)
Q Consensus 215 I~~-p~i~a~I~~~~G~l~~-----~ekdy~~A~------syF~EaF~~y~e~g~--~~a~~~LKY~~ 268 (288)
|+. .+++|..|+.|=.+=+ -.||++.|. ...|.+|..++--++ .++..++||-|
T Consensus 150 v~~edYLlGL~DLtGEL~R~ain~v~~Gd~~~~~~i~~fm~~Ly~~f~~Ln~~n~~LRkK~D~lk~sv 217 (249)
T 3axj_A 150 LDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLNLKNDGLRKRFDALKYDV 217 (249)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHH
Confidence 455 7999999999865543 667887776 566778888774444 48899999976
No 236
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=67.34 E-value=80 Score=29.31 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 184 VYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 184 v~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
+|..-.-++...+++..|.+.+.+|+.+. |... -....|+++...|+++.|...|.+||.-
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln-----~s~~--a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLE-----MSWL--NYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----CCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcC-----CCHH--HHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 33333444555688888888888888885 2222 2366788888888888888888888763
No 237
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=66.17 E-value=36 Score=33.12 Aligned_cols=26 Identities=8% Similarity=-0.015 Sum_probs=16.8
Q ss_pred hhHHHHHhhhcchhHHHHHHHHHHHh
Q 023037 140 LKLCKIWFDMGEYGRMSKILKELHKS 165 (288)
Q Consensus 140 ~kL~~lyl~~~~y~~~~~ll~elkk~ 165 (288)
-+||..+++.|+++.|..++..++..
T Consensus 685 ~~la~~al~~~~~~~A~~~y~~~~d~ 710 (814)
T 3mkq_A 685 RALGDASLQRFNFKLAIEAFTNAHDL 710 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHccCh
Confidence 45667777777777776666665444
No 238
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=66.05 E-value=9.6 Score=37.31 Aligned_cols=98 Identities=9% Similarity=0.014 Sum_probs=61.8
Q ss_pred HHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc------CCC
Q 023037 144 KIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA------IPH 217 (288)
Q Consensus 144 ~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~------I~~ 217 (288)
.+.++.|++++|.++.+++ +++ ..+..-.+++...+|+..|..+|.++...... ...
T Consensus 660 ~~~l~~~~~~~A~~~~~~~----------~~~-------~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~ 722 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLTDE----------SAE-------MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNN 722 (814)
T ss_dssp HHHHHHTCHHHHHHHHTTC----------CCH-------HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC
T ss_pred ehhhhcCCHHHHHHHHHhh----------CcH-------hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCC
Confidence 4567889999988876543 454 45666677788888888888888887544432 222
Q ss_pred hhHHHHHHhhcchhhhhhccHHHHHHHHH------HHHhhhhhhCC-hhHHH
Q 023037 218 PRIMGIIRECGGKMHMAERQWADAATDFF------EAFKNYDEAGN-QRRIQ 262 (288)
Q Consensus 218 p~i~a~I~~~~G~l~~~ekdy~~A~syF~------EaF~~y~e~g~-~~a~~ 262 (288)
+.... .-|.+...++++..|+..|. +|.+-|.+.|. +.|+.
T Consensus 723 ~~~~~----~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~ 770 (814)
T 3mkq_A 723 KEGLV----TLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAF 770 (814)
T ss_dssp HHHHH----HHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHH----HHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHcCChHHHHH
Confidence 22222 22455667788888875554 56666666665 44433
No 239
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=63.35 E-value=60 Score=26.51 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=39.4
Q ss_pred HHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHh
Q 023037 145 IWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 145 lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~ 210 (288)
.+..+|+-+++.++++++.+- . ..--|+..-.+.+|.++||..++..++.+|..
T Consensus 100 ~lv~~~KkDqLdki~~~~l~n--------~----~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 100 ILVIQGKRDKLEEIGREILKN--------N----EVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHC----------C----CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhccHhHHHHHHHHHhcc--------C----CCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 345778888899999996432 1 11125666678899999999999999999854
No 240
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=60.08 E-value=1.1e+02 Score=28.38 Aligned_cols=129 Identities=11% Similarity=0.051 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhh
Q 023037 69 KYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFD 148 (288)
Q Consensus 69 ~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~ 148 (288)
+..++.+++++.+..= |....+.+...+.-++..... +. +.... ..................-..+.--++..++-
T Consensus 214 ~~~~A~~l~e~Al~lD-P~~a~A~A~la~a~~~~~~~~-~~-~~~~~-~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~ 289 (372)
T 3ly7_A 214 SLNRASELLGEIVQSS-PEFTYARAEKALVDIVRHSQH-PL-DEKQL-AALNTEIDNIVTLPELNNLSIIYQIKAVSALV 289 (372)
T ss_dssp HHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHS-CC-CHHHH-HHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHhccC-CC-chhhH-HHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh
Confidence 3467888888888887 888888888888776432221 11 11111 11112222111111223333566677778888
Q ss_pred hcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhcc
Q 023037 149 MGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSA 214 (288)
Q Consensus 149 ~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~ 214 (288)
.|+++++...+++...+ +. + .-.|.+-++++.-.|++..|.+.|..|..+...
T Consensus 290 ~gd~d~A~~~l~rAl~L-------n~----s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDL-------EM----S--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HTCHHHHHHHHHHHHHH-------CC----C--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCHHHHHHHHHHHHhc-------CC----C--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 89999999999999999 31 2 246678899999999999999999999988643
No 241
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=59.73 E-value=1.1e+02 Score=28.09 Aligned_cols=167 Identities=11% Similarity=0.031 Sum_probs=98.7
Q ss_pred CCCCH---HHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 023037 28 VETDP---EGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMD 102 (288)
Q Consensus 28 ~~~d~---~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild 102 (288)
.++|+ =+|-+.++-+...-. .+-...-.-|++=+..+.+.|++..+.++...++... ..-.....+..+.+|++
T Consensus 24 ~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy-~~~~~~~~~~~~~rL~~ 102 (336)
T 3lpz_A 24 AEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTF-RQAGQRVDGASRGKLLG 102 (336)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHH
T ss_pred hCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHH-HHcCCCCCHHHHHHHHH
Confidence 34666 566666666665321 1112233445566677788888888888877777766 33222345567778888
Q ss_pred HhccCCCcchhhHHHHHHHHHHHHHHhhhh----hhhHHhhhhHHHHHhhhcchhHHHH------------HHHHHHHhc
Q 023037 103 FVSGSASQNFSLLREFYQTTLKALEEAKNE----RLWFKTNLKLCKIWFDMGEYGRMSK------------ILKELHKSC 166 (288)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~i~~a~ne----r~~f~~~~kL~~lyl~~~~y~~~~~------------ll~elkk~~ 166 (288)
.+...+..++ .-.....++|.|+... ..--.+..-+|..|...++|.+|.. +.+=+..+.
T Consensus 103 L~~~~~~~~p----~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~ 178 (336)
T 3lpz_A 103 CLRLFQPGEP----VRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWY 178 (336)
T ss_dssp HHTTSCTTCH----HHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHH
T ss_pred HHHhCCCCCc----HHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 8877754222 2345666788898742 2222778889999999999888622 222222222
Q ss_pred cCCCCCccccccchHHHHHHHHH-HHHHhhcCHHHHHHHHHH
Q 023037 167 QREDGTDDQKKGSQLLEVYAIEI-QMYTETKNNKKLKQLYQK 207 (288)
Q Consensus 167 ~~~~~~dDk~~~~~llEv~~lE~-~~y~~~~n~~kak~~y~~ 207 (288)
... + ..-.++++... --|..++|..-|+.++..
T Consensus 179 ~~~----~----~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 179 KQD----E----SHTAPLYCARAVLPYLLVANVRAANTAYRI 212 (336)
T ss_dssp HTS----C----GGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred Hhc----C----CccHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 211 1 22235555553 345677899988885543
No 242
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=58.94 E-value=1e+02 Score=27.78 Aligned_cols=124 Identities=12% Similarity=0.083 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhhcCCc-cchhhHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 023037 32 PEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRL--------------GKYKEMMDAYREMLTYIKSAVTRNYSEKC 96 (288)
Q Consensus 32 ~~~Al~~f~~ii~~~~-e~~~~~~kal~~l~~l~~~~--------------g~~~~~l~~~~~~l~~~~~~v~ka~~~k~ 96 (288)
++++++.+.+.|+.++ +..-| .+.+.++... +.+++.++++.+.+..- | .+.++=.
T Consensus 161 ~~eel~~~~~~I~~~p~N~SAW-----~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~-P---~d~SaW~ 231 (331)
T 3dss_A 161 PAEELAFTDSLITRNFSNYSSW-----HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD-P---NDQSAWF 231 (331)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHH-----HHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHS-T---TCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHH-----HHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhC-C---CCHHHHH
Confidence 4677777777777665 33445 3334444443 34667777776665443 3 2333332
Q ss_pred -HHHHHHHhccCCC---cchhhHHHHHHHHHHHHHHhhhhhhhH-HhhhhHHHHHhhhcchhHHHHHHHHHHHh
Q 023037 97 -INNIMDFVSGSAS---QNFSLLREFYQTTLKALEEAKNERLWF-KTNLKLCKIWFDMGEYGRMSKILKELHKS 165 (288)
Q Consensus 97 -i~~ild~~~~~~~---~~~~~~~~~~~~~l~~i~~a~ner~~f-~~~~kL~~lyl~~~~y~~~~~ll~elkk~ 165 (288)
.+.++......+. ...+.++..++.+.+.++-..+. .|. ...+-+....-..|.+.++...+.+|.++
T Consensus 232 Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~-~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (331)
T 3dss_A 232 YHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPEN-KWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 304 (331)
T ss_dssp HHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCccc-chHHHHHHHHHHhhcccccHHHHHHHHHHHHHh
Confidence 3344433321111 11246677777777777766554 454 22222222222467788899999999999
No 243
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=57.50 E-value=1.6e+02 Score=29.36 Aligned_cols=168 Identities=5% Similarity=-0.023 Sum_probs=99.1
Q ss_pred HHHHHHHHHcCCHHHHH-HHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhh------
Q 023037 58 KQTVKLYYRLGKYKEMM-DAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAK------ 130 (288)
Q Consensus 58 ~~l~~l~~~~g~~~~~l-~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~------ 130 (288)
...++.+...|+.+++. +.|.+.+..+ |. + ..+--..++..... .+.+.....|+.+++.+...-
T Consensus 347 ~~ya~~~~~~~~~~~a~r~il~rAi~~~-P~---s--~~Lwl~~a~~ee~~--~~~e~aR~iyek~l~~l~~~~~~~~~~ 418 (679)
T 4e6h_A 347 FNMANYQGEKNTDSTVITKYLKLGQQCI-PN---S--AVLAFSLSEQYELN--TKIPEIETTILSCIDRIHLDLAALMED 418 (679)
T ss_dssp HHHHHHHHHHSCCTTHHHHHHHHHHHHC-TT---C--HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHhC-CC---C--HHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 34456677788888886 8888887655 42 1 11111112212111 235567777887777652110
Q ss_pred -h------h--hhhH-HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhh-cCHH
Q 023037 131 -N------E--RLWF-KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTET-KNNK 199 (288)
Q Consensus 131 -n------e--r~~f-~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~-~n~~ 199 (288)
. . +..+ .+-+..+.+....|..+.|..++....+.+... .. ++|.--+.+-... ++..
T Consensus 419 ~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~---------~~--~lyi~~A~lE~~~~~d~e 487 (679)
T 4e6h_A 419 DPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV---------TP--DIYLENAYIEYHISKDTK 487 (679)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS---------CT--HHHHHHHHHHHTTTSCCH
T ss_pred cCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC---------Ch--HHHHHHHHHHHHhCCCHH
Confidence 0 0 1112 456777777788889999999999887763211 11 2222223333333 5699
Q ss_pred HHHHHHHHHHhhhccCCC-hhH-HHHHHhhcchhhhhhccHHHHHHHHHHHHhhh
Q 023037 200 KLKQLYQKALAIKSAIPH-PRI-MGIIRECGGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 200 kak~~y~~A~~~a~~I~~-p~i-~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+|+.+|..+++. -++ |.+ ..-++ +....++...|...|-.|.+..
T Consensus 488 ~Ar~ife~~Lk~---~p~~~~~w~~y~~-----fe~~~~~~~~AR~lferal~~~ 534 (679)
T 4e6h_A 488 TACKVLELGLKY---FATDGEYINKYLD-----FLIYVNEESQVKSLFESSIDKI 534 (679)
T ss_dssp HHHHHHHHHHHH---HTTCHHHHHHHHH-----HHHHHTCHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHH---CCCchHHHHHHHH-----HHHhCCCHHHHHHHHHHHHHhc
Confidence 999999999986 334 433 23343 3445688899998888877654
No 244
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=56.96 E-value=68 Score=25.06 Aligned_cols=69 Identities=10% Similarity=-0.047 Sum_probs=51.2
Q ss_pred hhHHhhhhHHHHHhhhcchhH---HHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHh
Q 023037 134 LWFKTNLKLCKIWFDMGEYGR---MSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALA 210 (288)
Q Consensus 134 ~~f~~~~kL~~lyl~~~~y~~---~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~ 210 (288)
..-.+..++|-.+...++-.. ...++.++.+. ++. ..--|..-.-+-.|+++|||.+|+......+.
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~-------~~p---~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK-------GSK---EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT-------SCH---HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCc---chHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 444778889999998887777 56777777665 322 23447777778888899999999999888877
Q ss_pred hh
Q 023037 211 IK 212 (288)
Q Consensus 211 ~a 212 (288)
+.
T Consensus 103 ~e 104 (126)
T 1nzn_A 103 TE 104 (126)
T ss_dssp HC
T ss_pred hC
Confidence 64
No 245
>4b0z_A RPN12, 26S proteasome regulatory subunit RPN12; protein binding, proteasome ubitquitin; HET: SGM GOL; 1.58A {Schizosaccharomyces pombe}
Probab=52.03 E-value=91 Score=26.50 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=19.9
Q ss_pred hhHHHHHhhhcchhHHHHHHHHHHHh
Q 023037 140 LKLCKIWFDMGEYGRMSKILKELHKS 165 (288)
Q Consensus 140 ~kL~~lyl~~~~y~~~~~ll~elkk~ 165 (288)
++-..-++++++|+.|.+++..+|..
T Consensus 11 l~~L~~~~~~~d~~~~~~lL~~lk~~ 36 (229)
T 4b0z_A 11 LNHLADLYDRKDWNACKKELLKLKVE 36 (229)
T ss_dssp SHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44445567889999999999998754
No 246
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=49.42 E-value=60 Score=32.50 Aligned_cols=104 Identities=8% Similarity=-0.032 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhccCCC-----cchh--hHHHHHHHHHHHHHH
Q 023037 56 ALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSAS-----QNFS--LLREFYQTTLKALEE 128 (288)
Q Consensus 56 al~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~~~~-----~~~~--~~~~~~~~~l~~i~~ 128 (288)
-+.+.+.-....|++++|+.+|.-.-.+- ++-.++|+.|-.+-..++ .+.+ .......++.+.++.
T Consensus 445 i~~~aA~~ae~~G~~~dAi~LY~La~~~d-------~vl~lln~~Ls~~l~~~~~~~~~~~~~~~~~~~l~~la~~i~~~ 517 (661)
T 2qx5_A 445 ITEQAARRADEDGRIYDSILLYQLAEEYD-------IVITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASI 517 (661)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHHHHHHHHHHSCTTSCSSCSSCCTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHH
Confidence 33556677788899999998887554333 222334443332211110 0000 112233444444443
Q ss_pred hh-----------hhhhhHHhhhhHHHHH--hhhcchhHHHHHHHHHHHhcc
Q 023037 129 AK-----------NERLWFKTNLKLCKIW--FDMGEYGRMSKILKELHKSCQ 167 (288)
Q Consensus 129 a~-----------ner~~f~~~~kL~~ly--l~~~~y~~~~~ll~elkk~~~ 167 (288)
-. ..|-+|.+-+++...+ +..|+|+.|...++++. +++
T Consensus 518 y~~~~~~~~~~~~~~~~t~~lLl~l~~f~~~~~~g~~~~AL~~i~~L~-llP 568 (661)
T 2qx5_A 518 YFDNAGISRQIHVKNKEICMLLLNISSIRELYFNKQWQETLSQMELLD-LLP 568 (661)
T ss_dssp HTTCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTS-CSC
T ss_pred HhcCchhhhhccHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHhCC-CCC
Confidence 11 2466788888888888 99999999999998875 444
No 247
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=49.39 E-value=47 Score=30.02 Aligned_cols=66 Identities=9% Similarity=-0.076 Sum_probs=50.0
Q ss_pred hHHHHHHhhcccCCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Q 023037 16 SRVLCSILEKGLVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYR-LGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 16 ~~~~~y~~ak~~~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~-~g~~~~~l~~~~~~l~~~ 84 (288)
+-+..|+..=....+|+++|.++|++.+..+++.. .-+..-.+.-++. +|+++++.+++++.+..=
T Consensus 204 ~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~---id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~ 270 (301)
T 3u64_A 204 VLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD---PDHHITYADALCIPLNNRAGFDEALDRALAID 270 (301)
T ss_dssp HHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC---SHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC---chHHHHHHHHHHHhcCCHHHHHHHHHHHHcCC
Confidence 34566776656778999999999999999987421 1344567777777 599999999999987644
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=49.26 E-value=70 Score=26.51 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=14.7
Q ss_pred HHHhhhcchhHHHHHHHHH
Q 023037 144 KIWFDMGEYGRMSKILKEL 162 (288)
Q Consensus 144 ~lyl~~~~y~~~~~ll~el 162 (288)
.+-++.|+++.|.++.+++
T Consensus 13 ~LAL~lg~l~~A~e~a~~l 31 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL 31 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHh
Confidence 3556789999998887766
No 249
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=48.96 E-value=1.5e+02 Score=26.64 Aligned_cols=192 Identities=7% Similarity=0.002 Sum_probs=102.9
Q ss_pred CCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHhhhhhhhHHHHHHHHHHHhccCC
Q 023037 30 TDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYRE-MLTYIKSAVTRNYSEKCINNIMDFVSGSA 108 (288)
Q Consensus 30 ~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~-~l~~~~~~v~ka~~~k~i~~ild~~~~~~ 108 (288)
+..+.-++-+++.|+... --+ --+-++-+.-=|.++++|+++++++.+ .+.++ ..---+-+.++..-+||.+....
T Consensus 11 ~~~~r~l~rl~~~I~~G~-yYE-AhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll-~~~Q~~sa~DLa~llvev~~~~~ 87 (312)
T 2wpv_A 11 AKLAKTLQRFENKIKAGD-YYE-AHQTLRTIANRYVRSKSYEHAIELISQGALSFL-KAKQGGSGTDLIFYLLEVYDLAE 87 (312)
T ss_dssp -CHHHHHHHHHHHHHHTC-HHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhccC-hHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HCCCcchHHHHHHHHHHHHHHcC
Confidence 345666666666665421 011 123345566777888999999997554 44455 44444556666666677665431
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
. ...+...+...+++..... +=..-.+++++..++....++ .+ ..=.++|.+-
T Consensus 88 ~---~~~~~~~~rl~~l~~~~p~-------------------~~~~r~~fi~~ai~WS~~~g~--~~---~Gdp~LH~~~ 140 (312)
T 2wpv_A 88 V---KVDDISVARLVRLIAELDP-------------------SEPNLKDVITGMNNWSIKFSE--YK---FGDPYLHNTI 140 (312)
T ss_dssp C---CCSHHHHHHHHHHHTTCCT-------------------TCTTHHHHHHHHHHHHHHTSS--CT---TCCHHHHHHH
T ss_pred C---CCCHHHHHHHHHHHHHCCC-------------------CCchHHHHHHHHHHHHhhcCC--CC---CCCHHHHHHH
Confidence 1 0112222222233222111 111235777888888654421 11 2223899999
Q ss_pred HHHHHhhcCHHHHHHHHH-----HHHhhhccCC--------C-hhHHHHHHhhcchh-hhhhccHHHHHHHHHHHHhhh
Q 023037 189 IQMYTETKNNKKLKQLYQ-----KALAIKSAIP--------H-PRIMGIIRECGGKM-HMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~-----~A~~~a~~I~--------~-p~i~a~I~~~~G~l-~~~ekdy~~A~syF~EaF~~y 252 (288)
++.|...+|+.+|+..+- .+...++-+. + |.-.+.. ..-+++ +..-++-+.|..-|-+=.+.+
T Consensus 141 a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf-~~RaVL~yL~l~n~~~A~~~~~~f~~~~ 218 (312)
T 2wpv_A 141 GSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEF-FSRLVFNYLFISNISFAHESKDIFLERF 218 (312)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHH-HHHHHHHHHHTTBHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 999999999999998774 2333333221 2 3222222 333343 457788888776544433333
No 250
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=48.21 E-value=70 Score=26.49 Aligned_cols=49 Identities=12% Similarity=0.180 Sum_probs=37.2
Q ss_pred cCCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 023037 27 LVETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
+..+|.+.|.+.-+++ .+...| ++||+.--.+|+++-+.++|+++-.+-
T Consensus 16 L~lg~l~~A~e~a~~l----~~~~~W-----k~Lg~~AL~~gn~~lAe~cy~~~~D~~ 64 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL----NDSITW-----ERLIQEALAQGNASLAEMIYQTQHSFD 64 (177)
T ss_dssp HHTTCHHHHHHHHHHH----CCHHHH-----HHHHHHHHHTTCHHHHHHHHHHTTCHH
T ss_pred HhcCCHHHHHHHHHHh----CCHHHH-----HHHHHHHHHcCChHHHHHHHHHhCCHH
Confidence 4567778888776654 134567 789999999999999999999875443
No 251
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=48.20 E-value=26 Score=32.23 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhh---hhhhHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV---TRNYSEKCINNIM 101 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v---~ka~~~k~i~~il 101 (288)
..+++++|+......+..++ +-|.+..+++..|...|+..+|++.|+.++..+.... +-..+..+...|+
T Consensus 183 ~~g~~~~a~~~l~~~~~~~P----~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il 255 (388)
T 2ff4_A 183 ACGRASAVIAELEALTFEHP----YREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERIL 255 (388)
T ss_dssp HTTCHHHHHHHHHHHHHHST----TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 46788888888888877654 2356778999999999999999999999999874432 3344455555444
No 252
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=47.68 E-value=94 Score=28.02 Aligned_cols=86 Identities=13% Similarity=0.006 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhh-----cCHHHHHHHHHHHHhhhccC-CChhHHHHHHh
Q 023037 153 GRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTET-----KNNKKLKQLYQKALAIKSAI-PHPRIMGIIRE 226 (288)
Q Consensus 153 ~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~-----~n~~kak~~y~~A~~~a~~I-~~p~i~a~I~~ 226 (288)
.++..++++..++ |.. ..--..|..-+-+|... |+..||++.|.+|+.++-.= ..|. .
T Consensus 180 ~~A~a~lerAleL-------DP~---~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~------v 243 (301)
T 3u64_A 180 HAAVMMLERACDL-------WPS---YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHH------I 243 (301)
T ss_dssp HHHHHHHHHHHHH-------CTT---HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHH------H
T ss_pred HHHHHHHHHHHHh-------CCC---cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHH------H
Confidence 3467777777777 443 33346788888999885 99999999999999998632 2222 2
Q ss_pred hcchhhhh-hccHHHHHHHHHHHHhhhhh
Q 023037 227 CGGKMHMA-ERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 227 ~~G~l~~~-ekdy~~A~syF~EaF~~y~e 254 (288)
.=|..++. .+|++.|..+|-++...=..
T Consensus 244 ~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 244 TYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 23444565 59999999999999875443
No 253
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=45.81 E-value=1.2e+02 Score=24.76 Aligned_cols=100 Identities=8% Similarity=0.123 Sum_probs=63.3
Q ss_pred HHHHHHcCCH------HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH--hccCCCcchhhHHHHHHHHHHHHHHhhhh
Q 023037 61 VKLYYRLGKY------KEMMDAYREMLTYIKSAVTRNYSEKCINNIMDF--VSGSASQNFSLLREFYQTTLKALEEAKNE 132 (288)
Q Consensus 61 ~~l~~~~g~~------~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~--~~~~~~~~~~~~~~~~~~~l~~i~~a~ne 132 (288)
.++.-+.|++ +.+++.|++...-+ |.-.+-.-.+=|.--|.+ +..+ .+++.....|..|+.. .
T Consensus 20 l~llE~~g~p~~d~~l~rlrd~YerAia~~-Pp~k~~~wrrYI~LWIrYA~~~ei--~D~d~aR~vy~~a~~~------h 90 (161)
T 4h7y_A 20 LLKLEKNSVPLSDALLNKLIGRYSQAIEAL-PPDKYGQNESFARIQVRFAELKAI--QEPDDARDYFQMARAN------C 90 (161)
T ss_dssp HHHHHHHTCSCCHHHHHHHHHHHHHHHHHS-CGGGGTTCHHHHHHHHHHHHHHHH--HCGGGCHHHHHHHHHH------C
T ss_pred HHHHHHcCCCchhhHHHHHHHHHHHHHHcC-CccccccHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH------h
Confidence 3444445888 78888888776666 321111222222111111 1112 3455777888888874 2
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
+...++-+-.|..-+.+|+..+|.+++......|..+
T Consensus 91 KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 91 KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc
Confidence 3346888888889999999999999999999987654
No 254
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=44.12 E-value=75 Score=22.50 Aligned_cols=38 Identities=16% Similarity=0.318 Sum_probs=31.7
Q ss_pred hhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 132 ERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 132 er~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
..+.|--++.+|..++..|+++++..-+-...++|.+|
T Consensus 13 ~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 13 VQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 35678889999999999999999877666666799887
No 255
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=43.27 E-value=72 Score=26.05 Aligned_cols=74 Identities=9% Similarity=0.192 Sum_probs=54.1
Q ss_pred HhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCC
Q 023037 137 KTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIP 216 (288)
Q Consensus 137 ~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~ 216 (288)
.-.+.-+..++..|+|=+|-+++.++=+.+..++ +++
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~--~er----------------------------------------- 69 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN--TES----------------------------------------- 69 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS--HHH-----------------------------------------
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc--hHH-----------------------------------------
Confidence 3345566777778999999999999877644321 232
Q ss_pred ChhHHHHHH-hhcchhhhhhccHHHHHHHHHHHHhhhhh
Q 023037 217 HPRIMGIIR-ECGGKMHMAERQWADAATDFFEAFKNYDE 254 (288)
Q Consensus 217 ~p~i~a~I~-~~~G~l~~~ekdy~~A~syF~EaF~~y~e 254 (288)
.-+||.|. ...|..|...+|++-|..-|-+|...+..
T Consensus 70 -~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~ 107 (161)
T 2ijq_A 70 -KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRG 107 (161)
T ss_dssp -HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 23678888 88888888888888888888888776654
No 256
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=41.73 E-value=1.3e+02 Score=25.43 Aligned_cols=93 Identities=19% Similarity=0.227 Sum_probs=64.0
Q ss_pred HHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhhccCCChhHH
Q 023037 142 LCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIM 221 (288)
Q Consensus 142 L~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a~~I~~p~i~ 221 (288)
+...++-.|+|+++.-++-.+.-. -..-.++-.|..+++++||...+++.++-... -+|-+-
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~lNT~-----------------Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd-~d~~~d 100 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHKLNTC-----------------TSKYYESLCYKKKKDYKKAIKSLESILEGKVE-RDPDVD 100 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHTCCBH-----------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSB-CCCCCC
T ss_pred hhhhhhhcchHhHHHHHHHhcchH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cCcccc
Confidence 455677899999887776544222 23346788899999999999999988743221 125444
Q ss_pred HHHHhh-------------cchhhhhhccHHHHHHHHHHHHhhh
Q 023037 222 GIIREC-------------GGKMHMAERQWADAATDFFEAFKNY 252 (288)
Q Consensus 222 a~I~~~-------------~G~l~~~ekdy~~A~syF~EaF~~y 252 (288)
+.|+++ -|.+.-..++-+.|..||.-||..+
T Consensus 101 ~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~ 144 (242)
T 3kae_A 101 ARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKS 144 (242)
T ss_dssp HHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCc
Confidence 554443 4566667788889999999888754
No 257
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=39.89 E-value=30 Score=35.22 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHhhcCCc-cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEP-EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREM 80 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~-e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~ 80 (288)
..++++-|++.-++.|+..| |-.-| ..|+++|...|+|+.|+=.+..+
T Consensus 349 ~K~~~elAL~~Ak~AV~~aPseF~tW-----~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 349 NRGDYELALGVSNTSTELALDSFESW-----YNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSCHHHH-----HHHHHHHHHTTCHHHHHHHHHHS
T ss_pred ccCcHHHHHHHHHHHHhcCchhhHHH-----HHHHHHHHHhccHHHHHHHHhcC
Confidence 46789999999999999876 44555 79999999999999999877665
No 258
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=39.36 E-value=99 Score=26.22 Aligned_cols=57 Identities=12% Similarity=0.018 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHhhcCC----cc----------chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAME----PE----------KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~----~e----------~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
+..|+..|+....+|+..+ ++ ..+.++==+.-+++++.+.|+-++++.+|..+...-
T Consensus 74 klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~ 144 (242)
T 3kae_A 74 KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKS 144 (242)
T ss_dssp HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCc
Confidence 4578999999999999432 21 112345556678999999999999999998776544
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=36.89 E-value=1.6e+02 Score=23.54 Aligned_cols=69 Identities=10% Similarity=-0.005 Sum_probs=51.0
Q ss_pred hhhHHhhhhHHHHHhhhcchhH---HHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGR---MSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKAL 209 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~---~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~ 209 (288)
...-.+..++|-.+....+-.. ...++.++.+. .+ + .--|+.-.-.--|+++|||.+|+++....+
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~--~~---~------~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL 104 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE--AE---S------RRRECLYYLTIGCYKLGEYSMAKRYVDTLF 104 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH--CC---S------THHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc--Cc---c------chhHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3444778888888888777665 57788888775 11 1 223667777888999999999999999887
Q ss_pred hhh
Q 023037 210 AIK 212 (288)
Q Consensus 210 ~~a 212 (288)
.+.
T Consensus 105 ~~e 107 (144)
T 1y8m_A 105 EHE 107 (144)
T ss_dssp HTC
T ss_pred hcC
Confidence 764
No 260
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=34.91 E-value=2.6e+02 Score=25.40 Aligned_cols=144 Identities=13% Similarity=0.074 Sum_probs=77.7
Q ss_pred HHHHHHHHHhhcCCc--cchhhHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHhhhhhhhHHHHHHHHHHHhccCC-
Q 023037 33 EGALAGFAEVVAMEP--EKAEWGFKALKQTVKLYYRLGKYKEMMDAYR-EMLTYIKSAVTRNYSEKCINNIMDFVSGSA- 108 (288)
Q Consensus 33 ~~Al~~f~~ii~~~~--e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~-~~l~~~~~~v~ka~~~k~i~~ild~~~~~~- 108 (288)
+.-++-+++.|+... ++-+ --+-++-+.-=|.++++|+++++++. -.+.++ ..---+-+.++..-+||.+....
T Consensus 13 ~~~i~rl~~~I~~G~y~~~YE-AHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll-~~~Q~~sg~DL~~llvevy~~~~~ 90 (336)
T 3lpz_A 13 ERIIARLQRRIAEGQPEEQYE-AAQETRLVAARYSKQGNWAAAVDILASVSQTLL-RSGQGGSGGDLAVLLVDTFRQAGQ 90 (336)
T ss_dssp HHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCccccH-HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-HCCCcchHHHHHHHHHHHHHHcCC
Confidence 445555666555321 0111 22445556677889999999999554 455555 44444556666666677665431
Q ss_pred CcchhhHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHH
Q 023037 109 SQNFSLLREFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIE 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~l~~i~~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE 188 (288)
..+. ...+...+++.....+- ..-.+++++.-++....+ +.+ ..=-|+|.+-
T Consensus 91 ~~~~----~~~~rL~~L~~~~~~~~-------------------p~r~~fi~~ai~WS~~~g--~~~---~Gdp~LH~~i 142 (336)
T 3lpz_A 91 RVDG----ASRGKLLGCLRLFQPGE-------------------PVRKRFVKEMIDWSKKFG--DYP---AGDPELHHVV 142 (336)
T ss_dssp CCCH----HHHHHHHHHHTTSCTTC-------------------HHHHHHHHHHHHHHHHHS--SCT---TCCHHHHHHH
T ss_pred CCCH----HHHHHHHHHHHhCCCCC-------------------cHHHHHHHHHHHHHhhcC--CCC---CCCHHHHHHH
Confidence 1111 12222222222222111 123456777777755321 111 1122888888
Q ss_pred HHHHHhhcCHHHHHHHHH
Q 023037 189 IQMYTETKNNKKLKQLYQ 206 (288)
Q Consensus 189 ~~~y~~~~n~~kak~~y~ 206 (288)
+.+|..-+|+.+|...+-
T Consensus 143 g~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 143 GTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp HHHHHHTTCHHHHHHHHT
T ss_pred HHHHHccCCHHHHHHHHH
Confidence 888888888888877763
No 261
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=34.84 E-value=3.1e+02 Score=26.23 Aligned_cols=51 Identities=14% Similarity=0.211 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHHHhhcCCcc-chhhHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHH
Q 023037 29 ETDPEGALAGFAEVVAMEPE-KAEWGFKALKQTVKLYYRLGK----------YKEMMDAYREMLTYI 84 (288)
Q Consensus 29 ~~d~~~Al~~f~~ii~~~~e-~~~~~~kal~~l~~l~~~~g~----------~~~~l~~~~~~l~~~ 84 (288)
..-.++|++.+.+++..+++ ..-|-.+ +.++...|+ ++++++.+..++..-
T Consensus 42 ~~~~eeal~~~~~~l~~nP~~~taW~~R-----~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~ 103 (567)
T 1dce_A 42 GELDESVLELTSQILGANPDFATLWNCR-----REVLQHLETEKSPEESAALVKAELGFLESCLRVN 103 (567)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHH-----HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHCchhHHHHHHH-----HHHHHhcccccchhhhhhhHHHHHHHHHHHHHhC
Confidence 44447999999999999875 3445333 333444455 788888888887655
No 262
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=34.06 E-value=2.1e+02 Score=30.59 Aligned_cols=51 Identities=8% Similarity=-0.181 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhcc
Q 023037 54 FKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSG 106 (288)
Q Consensus 54 ~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i~~ild~~~~ 106 (288)
-..+.-|+..|++.|+.++|.+++.++....+..+ .-...+.|.||+.+..
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~--~PdvvTYNtLI~Glck 177 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK--LLTLDMYNAVMLGWAR 177 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT--TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC--CCCHhHHHHHHHHHHh
Confidence 45688899999999999999999987654321111 1123467777776654
No 263
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=33.51 E-value=1.4e+02 Score=24.08 Aligned_cols=58 Identities=16% Similarity=0.104 Sum_probs=41.4
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhH------Hh-------hhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 112 FSLLREFYQTTLKALEEAKNERLWF------KT-------NLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 112 ~~~~~~~~~~~l~~i~~a~ner~~f------~~-------~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
+..-..++.+++.+++.+.+.+-+| .| +..-|..+-..|+|.+|.++++.=.+-.-+|
T Consensus 64 YknD~RyLklWl~ya~~~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 64 YHNDPRFISYCLKFAEYNSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp GTTCHHHHHHHHHHHTTBSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred ccCCHHHHHHHHHHHHhcCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 4455778888888888877767676 23 4455666668899999999988776664433
No 264
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=32.82 E-value=1.1e+02 Score=22.02 Aligned_cols=22 Identities=14% Similarity=0.276 Sum_probs=19.1
Q ss_pred HHHHcCCHHHHHHHHHHHHHHH
Q 023037 63 LYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 63 l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
-.-..|+|++|+.+|.+.+.++
T Consensus 25 e~D~~g~y~eAl~lY~~Aie~l 46 (86)
T 4a5x_A 25 ELDSESRYPQALVCYQEGIDLL 46 (86)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHH
Confidence 3467799999999999999988
No 265
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=32.35 E-value=4.6e+02 Score=27.44 Aligned_cols=124 Identities=14% Similarity=0.080 Sum_probs=71.0
Q ss_pred CCCCH---HHHHHHHHHhhcCC------c----------cchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhh
Q 023037 28 VETDP---EGALAGFAEVVAME------P----------EKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV 88 (288)
Q Consensus 28 ~~~d~---~~Al~~f~~ii~~~------~----------e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v 88 (288)
.++|| .-||+.+..+|+.. . +...-+.-|-.=+.++|+..|+|++++.|=-..=+.|.-.-
T Consensus 25 ~e~~~~lk~~aL~~l~~~vd~~w~eia~~i~~ie~l~ed~~f~~r~laalvaSkvyy~Lg~~~~al~yaL~aG~~fd~~~ 104 (963)
T 4ady_A 25 RENQDSVKTYALESINNVVDQLWSEISNELPDIEALYDDDTFSDREMAALIASKVYYNLGEYESAVKYALAAKDRFDIDE 104 (963)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHGGGSCTTS
T ss_pred cCCchHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHcCCCcchHHHHHHHHHHHheeccchHHHHHHHHhCCCcCCCCC
Confidence 45666 47888888887641 0 11122344445567999999999999998755545662233
Q ss_pred hhhhHHHHHHHHHHHhccCCCcchhhHHHHHHHHHHHHHHhh-------hhhhhHHhhhhHHHHHhhhcchhHHHHHHHH
Q 023037 89 TRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEEAK-------NERLWFKTNLKLCKIWFDMGEYGRMSKILKE 161 (288)
Q Consensus 89 ~ka~~~k~i~~ild~~~~~~~~~~~~~~~~~~~~l~~i~~a~-------ner~~f~~~~kL~~lyl~~~~y~~~~~ll~e 161 (288)
.-.|++.+|...||.+-. +..+..+... -+.+-..+-.++..-.+..+.|.+|..|+=|
T Consensus 105 ~seYv~tiis~cid~y~~--------------~~~~~~~~~~~~~~~~~id~rL~~Lv~~iv~~cl~hnae~~AvdLalE 170 (963)
T 4ady_A 105 KSQFVETIVSKSIEMYVQ--------------EASKQYTKDEQFYTKDIIDPKLTSIFERMIEKCLKASELKLALGIALE 170 (963)
T ss_dssp CSHHHHHHHHHHHHHHHH--------------HHHHHHHHCTTGGGSSCSCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHH--------------HHhhccccccccccccccCHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 456777777776664421 1111111000 0122334445666666677777777666666
Q ss_pred HHHh
Q 023037 162 LHKS 165 (288)
Q Consensus 162 lkk~ 165 (288)
+.++
T Consensus 171 ~erL 174 (963)
T 4ady_A 171 GYRL 174 (963)
T ss_dssp TTCH
T ss_pred HhhH
Confidence 6555
No 266
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=32.16 E-value=67 Score=29.07 Aligned_cols=51 Identities=18% Similarity=0.289 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 023037 32 PEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTY 83 (288)
Q Consensus 32 ~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~ 83 (288)
.+++++.++++++.+|+. .|.-+++.-+.......|..+++.+++.++..+
T Consensus 254 l~~el~~~~elle~~pd~-~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (331)
T 3dss_A 254 LQSELESCKELQELEPEN-KWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 304 (331)
T ss_dssp HHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCccc-chHHHHHHHHHHhhcccccHHHHHHHHHHHHHh
Confidence 478999999999988764 787666655544444566777777777666544
No 267
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=31.11 E-value=2e+02 Score=22.76 Aligned_cols=70 Identities=10% Similarity=-0.006 Sum_probs=53.1
Q ss_pred hhhhHHhhhhHHHHHhhhcchhH---HHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 023037 132 ERLWFKTNLKLCKIWFDMGEYGR---MSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKA 208 (288)
Q Consensus 132 er~~f~~~~kL~~lyl~~~~y~~---~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A 208 (288)
....-.+..++|-.+...++-.. ...++.++.+. + . ..--|++-.-+--|+++|||.+|+.+....
T Consensus 36 ~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-------~-~---~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~l 104 (134)
T 3o48_A 36 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-------A-E---SRRRECLYYLTIGCYKLGEYSMAKRYVDTL 104 (134)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-------C-G---GGHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------C-c---chhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33444778888888887766554 68888888876 2 1 334577888888999999999999999988
Q ss_pred Hhhh
Q 023037 209 LAIK 212 (288)
Q Consensus 209 ~~~a 212 (288)
+.+.
T Consensus 105 L~~e 108 (134)
T 3o48_A 105 FEHE 108 (134)
T ss_dssp HTTC
T ss_pred HhhC
Confidence 7654
No 268
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=30.95 E-value=2.3e+02 Score=25.08 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=46.6
Q ss_pred cCCCCHHHHHHHHHHhhcCCcc--chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhh
Q 023037 27 LVETDPEGALAGFAEVVAMEPE--KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYIKSAV 88 (288)
Q Consensus 27 ~~~~d~~~Al~~f~~ii~~~~e--~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v 88 (288)
++.+++++|++..+.-|+.+|. ..+| .|.++++-.|+++.|..-++.+..+. +..
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~------~LfqLLcv~G~w~RA~~QL~~~a~l~-p~~ 64 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRS------SFIELLCIDGDFERADEQLMQSIKLF-PEY 64 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHH------HHHHHHHHHTCHHHHHHHHHHHHHHC-GGG
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHH------HHHHHHHhcCCHHHHHHHHHHHHHhC-chh
Confidence 5789999999999999998873 4555 68999999999999999998888877 543
No 269
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=30.79 E-value=2e+02 Score=23.13 Aligned_cols=91 Identities=12% Similarity=0.137 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHH---HhhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHH
Q 023037 115 LREFYQTTLKALE---EAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191 (288)
Q Consensus 115 ~~~~~~~~l~~i~---~a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~ 191 (288)
+..+++.|...+. .-+|+-|.+++=++.+... ++...+.+-|.+. . -|+.+...|--=...
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~dp~~if~~L~~~-------~---IG~~~AlfYe~wA~~ 110 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SDLHQFFEFLYNH-------G---IGTLSSPLYIAWAGH 110 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SCHHHHHHHHHTT-------T---TTTTBHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CCHHHHHHHHHHC-------C---CcHHHHHHHHHHHHH
Confidence 4455666666664 3457788878877777652 3477788888666 2 235555666666778
Q ss_pred HHhhcCHHHHHHHHHHHHhhhccCCChhHHH
Q 023037 192 YTETKNNKKLKQLYQKALAIKSAIPHPRIMG 222 (288)
Q Consensus 192 y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a 222 (288)
+-..+|+.+|.++|...... ++-|--+++-
T Consensus 111 lE~~g~~~~A~~Vy~~Gi~~-~A~P~~rL~~ 140 (152)
T 4a1g_A 111 LEAQGELQHASAVLQRGIQN-QAEPREFLQQ 140 (152)
T ss_dssp HHHTTCHHHHHHHHHHHHHT-TCBSHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHc-CCccHHHHHH
Confidence 88899999999999998774 5555545543
No 270
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=30.59 E-value=82 Score=23.56 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 023037 58 KQTVKLYYRLGKYKEMMDAYREMLTYIKSAVTRNYSEKCI 97 (288)
Q Consensus 58 ~~l~~l~~~~g~~~~~l~~~~~~l~~~~~~v~ka~~~k~i 97 (288)
-.-++-+.+.|+|++++++.+....|+...+.....++..
T Consensus 19 ~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~qa~ 58 (97)
T 2crb_A 19 SRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAH 58 (97)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3466778899999999999999999996665554555533
No 271
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=27.48 E-value=1.6e+02 Score=21.38 Aligned_cols=27 Identities=11% Similarity=0.214 Sum_probs=21.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 023037 58 KQTVKLYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 58 ~~l~~l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
..-+.-.-..|+|++|+.+|.+.+.++
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Aie~l 45 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGIDML 45 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 334444567799999999999999988
No 272
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=27.43 E-value=1.1e+02 Score=32.70 Aligned_cols=55 Identities=9% Similarity=0.015 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHhhcCCccchhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023037 28 VETDPEGALAGFAEVVAMEPEKAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLT 82 (288)
Q Consensus 28 ~~~d~~~Al~~f~~ii~~~~e~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~ 82 (288)
+.++.++|.+.|.+.-+.......---..++-|+.-|++.|+.++|.+++.++..
T Consensus 139 K~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 139 LTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 3578899999997654321111111135778899999999999999999998853
No 273
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.90 E-value=1.1e+02 Score=29.77 Aligned_cols=70 Identities=10% Similarity=0.050 Sum_probs=55.4
Q ss_pred HHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhhh
Q 023037 136 FKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIK 212 (288)
Q Consensus 136 f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~~~a 212 (288)
..+-+-|.+.|+..+.|+.|..++.... .++. + ..+...+.-+..-++++..++||.+|...++.|..-+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~----~-~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHT----D-VSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTT----T-SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcc----c-CCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 3667788999999999999999999774 2211 1 1125678888889999999999999999999997643
No 274
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=26.85 E-value=90 Score=23.27 Aligned_cols=37 Identities=16% Similarity=0.344 Sum_probs=29.1
Q ss_pred hhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 133 RLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 133 r~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
.+.|--++.+|..++..|+++.+..-+-...++|.+|
T Consensus 17 e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 17 QKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 4667788999999999999999887444555577766
No 275
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=26.72 E-value=65 Score=24.06 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHhhcCCcc---chhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 023037 30 TDPEGALAGFAEVVAMEPE---KAEWGFKALKQTVKLYYRLGKYKEMMDAYREMLT 82 (288)
Q Consensus 30 ~d~~~Al~~f~~ii~~~~e---~~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~ 82 (288)
.|+++-.++|.+=|...+. .++ .+.++.++.+...--+++.+++..|++.+|
T Consensus 11 ~d~e~~e~~Fl~eV~lGE~L~~~g~-~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP 65 (95)
T 1om2_A 11 KDAEAVQKFFLEEIQLGEELLAQGD-YEKGVDHLTNAIAVCGQPQQLLQVLQQTLP 65 (95)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHSCHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHhhCC
Confidence 3556666777766654331 233 366666666666666777777777766554
No 276
>3qb5_K Translin-associated protein X; alpha helical bundle, ribonuclease, hydrolase; 2.95A {Homo sapiens} PDB: 3pja_J
Probab=26.40 E-value=3.4e+02 Score=23.99 Aligned_cols=54 Identities=15% Similarity=0.321 Sum_probs=42.0
Q ss_pred CCC-hhHHHHHHhhcchhhh-----hhccHHHHH------HHHHHHHhhhhhhCC---hhHHHHhHHHH
Q 023037 215 IPH-PRIMGIIRECGGKMHM-----AERQWADAA------TDFFEAFKNYDEAGN---QRRIQCLKYLV 268 (288)
Q Consensus 215 I~~-p~i~a~I~~~~G~l~~-----~ekdy~~A~------syF~EaF~~y~e~g~---~~a~~~LKY~~ 268 (288)
|+. .+++|+.|+.|=.|=+ -.||++++. ..+|.+|..++..++ .++..++||-|
T Consensus 182 V~~eDYLlGL~DLtGELmR~ainsv~~Gd~~~~~~i~~fm~~Ly~gf~~L~~~~~~~LrKK~d~lk~sv 250 (290)
T 3qb5_K 182 VTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSL 250 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHH
Confidence 444 6999999998866643 467887775 567889998887776 38899999976
No 277
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=24.86 E-value=2.5e+02 Score=21.89 Aligned_cols=34 Identities=18% Similarity=0.487 Sum_probs=29.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 023037 50 AEWGFKALKQTVKLYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 50 ~~~~~kal~~l~~l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
..| ..+|....++|+..++.+++++.+..+-..+
T Consensus 37 E~W-~e~LeeASrlyf~~~n~~~m~~~L~pLh~~l 70 (126)
T 2npu_A 37 EMW-HEGLEEASRLYFGERNVKGMFEVLEPLHAMM 70 (126)
T ss_dssp HHH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 356 7899999999999999999999997776655
No 278
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=24.73 E-value=3.6e+02 Score=23.75 Aligned_cols=54 Identities=15% Similarity=0.014 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhhhc-cC----CChhHHHHHHhhcchhhhhhccHHHHHHHHHHHHhh
Q 023037 198 NKKLKQLYQKALAIKS-AI----PHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKN 251 (288)
Q Consensus 198 ~~kak~~y~~A~~~a~-~I----~~p~i~a~I~~~~G~l~~~ekdy~~A~syF~EaF~~ 251 (288)
..++.++|..|..++. .+ +||--.|..--.+=-.|=-.++-+.|+.---+||+.
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 5678999999999885 35 669889988777644343578899999998888886
No 279
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=24.15 E-value=3.2e+02 Score=22.98 Aligned_cols=82 Identities=12% Similarity=0.169 Sum_probs=52.2
Q ss_pred hhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 023037 130 KNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKAL 209 (288)
Q Consensus 130 ~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~y~~~~n~~kak~~y~~A~ 209 (288)
+|+-|.+++-++.+... ..++..+...+..-+.+. .- |..+...|--=...+-..|++.+|.++|....
T Consensus 74 kND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~-------~I---G~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI 142 (202)
T 3esl_A 74 RNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNK-------GI---GTKLSLFYEEFSKLLENAQFFLEAKVLLELGA 142 (202)
T ss_dssp TTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH-------TS---STTBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHC-------CC---cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 36666667766666665 233355677777777666 22 24555555555677777899999999998876
Q ss_pred hhhccCCChhHHHH
Q 023037 210 AIKSAIPHPRIMGI 223 (288)
Q Consensus 210 ~~a~~I~~p~i~a~ 223 (288)
. .+|-|--+++-.
T Consensus 143 ~-~~A~P~~rL~~~ 155 (202)
T 3esl_A 143 E-NNCRPYNRLLRS 155 (202)
T ss_dssp H-TTCBSHHHHHHH
T ss_pred H-cCCccHHHHHHH
Confidence 6 334454454433
No 280
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=24.04 E-value=2.9e+02 Score=22.39 Aligned_cols=93 Identities=18% Similarity=0.286 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHH---hhhhhhhHHhhhhHHHHHhhhcchhHHHHHHHHHHHhccCCCCCccccccchHHHHHHHHHHH
Q 023037 115 LREFYQTTLKALEE---AKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDGTDDQKKGSQLLEVYAIEIQM 191 (288)
Q Consensus 115 ~~~~~~~~l~~i~~---a~ner~~f~~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~~~~dDk~~~~~llEv~~lE~~~ 191 (288)
+..+++.|...+.. -+|+-|.+++=++.+... ++...+.+.|.+. . -|+.+...|--=..+
T Consensus 42 L~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~~p~~if~~L~~~-------~---IG~~~AlfY~~wA~~ 105 (164)
T 2wvi_A 42 MSTLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC------NEPLDMYSYLHNQ-------G---IGVSLAQFYISWAEE 105 (164)
T ss_dssp HHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC------SCHHHHHHHHHHT-------T---SSTTBHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc------CCHHHHHHHHHHC-------C---cchhhHHHHHHHHHH
Confidence 44455666665542 346777777777777652 3366677777665 2 235555666666777
Q ss_pred HHhhcCHHHHHHHHHHHHhhhccCCChhHHHHH
Q 023037 192 YTETKNNKKLKQLYQKALAIKSAIPHPRIMGII 224 (288)
Q Consensus 192 y~~~~n~~kak~~y~~A~~~a~~I~~p~i~a~I 224 (288)
+-..+|+.+|..+|...... ++-|.-+++-.-
T Consensus 106 lE~~~~~~~A~~Iy~~Gi~~-~A~P~~~L~~~~ 137 (164)
T 2wvi_A 106 YEARENFRKADAIFQEGIQQ-KAEPLERLQSQH 137 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHT-TCBSHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHc-CCCcHHHHHHHH
Confidence 88889999999999998763 355555554433
No 281
>3txs_A Terminase DNA packaging enzyme small subunit; helix, small terminase, viral protein; 1.81A {Aeromonas phage 44RR2} PDB: 3txq_A
Probab=23.58 E-value=72 Score=23.74 Aligned_cols=29 Identities=14% Similarity=0.296 Sum_probs=20.0
Q ss_pred hccHHHHHHHHHH-----------HHhhhhhhCChhHHHH
Q 023037 235 ERQWADAATDFFE-----------AFKNYDEAGNQRRIQC 263 (288)
Q Consensus 235 ekdy~~A~syF~E-----------aF~~y~e~g~~~a~~~ 263 (288)
++||..++...+. ++++..++++||+..+
T Consensus 23 e~DY~~~R~~lh~q~Qml~daa~~aLE~AknSdsPR~~EV 62 (94)
T 3txs_A 23 DDDYELVRRNMHYQSQMLLDMAKIALENAKNADSPRHVEV 62 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHH
Confidence 4566655554443 6777888999999776
No 282
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=23.55 E-value=2e+02 Score=20.26 Aligned_cols=22 Identities=27% Similarity=0.369 Sum_probs=18.9
Q ss_pred HHHHcCCHHHHHHHHHHHHHHH
Q 023037 63 LYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 63 l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
-.-..|+|++++.+|.+.+.++
T Consensus 22 ~~D~~g~y~eAl~~Y~~aie~l 43 (85)
T 2v6x_A 22 DLDTATQYEEAYTAYYNGLDYL 43 (85)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHH
Confidence 4456799999999999999988
No 283
>1j1j_A Translin; testis/brain RNA binding protein, ssDNA binding protein, RNA protein, DNA binding protein; 2.20A {Homo sapiens} SCOP: a.118.16.1 PDB: 3qb5_A 3pja_A 1key_A
Probab=23.32 E-value=3.5e+02 Score=23.13 Aligned_cols=54 Identities=13% Similarity=0.256 Sum_probs=39.0
Q ss_pred CCC-hhHHHHHHhhcchhhh-----hhccHHHHHH------HHHHHHhhhhhhCC--hhHHHHhHHHH
Q 023037 215 IPH-PRIMGIIRECGGKMHM-----AERQWADAAT------DFFEAFKNYDEAGN--QRRIQCLKYLV 268 (288)
Q Consensus 215 I~~-p~i~a~I~~~~G~l~~-----~ekdy~~A~s------yF~EaF~~y~e~g~--~~a~~~LKY~~ 268 (288)
|+. .+++|..|+.|=.+=+ -.||++.|.. ..|.+|..++--++ .++..++||-|
T Consensus 147 v~~edYLlGL~DltGEL~R~avn~v~~Gd~~~~~~i~~fm~~Ly~~f~~Lnl~n~~LRkK~D~lk~~v 214 (240)
T 1j1j_A 147 LDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDV 214 (240)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHH
Confidence 444 6999999999865543 5677777654 56778888774333 48889999976
No 284
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=22.69 E-value=1e+02 Score=22.08 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=23.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHH
Q 023037 59 QTVKLYYRLGKYKEMMDAYREMLTYI 84 (288)
Q Consensus 59 ~l~~l~~~~g~~~~~l~~~~~~l~~~ 84 (288)
.++.=|+-.|+|+.++.+|+..+.-+
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~qI 42 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLDQM 42 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 57788899999999999999988777
No 285
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=22.09 E-value=3.2e+02 Score=22.14 Aligned_cols=58 Identities=9% Similarity=0.016 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhH------H-------hhhhHHHHHhhhcchhHHHHHHHHHHHhccCC
Q 023037 112 FSLLREFYQTTLKALEEAKNERLWF------K-------TNLKLCKIWFDMGEYGRMSKILKELHKSCQRE 169 (288)
Q Consensus 112 ~~~~~~~~~~~l~~i~~a~ner~~f------~-------~~~kL~~lyl~~~~y~~~~~ll~elkk~~~~~ 169 (288)
+..-..++.+++.+++-+++.+-+| . .+..-|..+-..|+|.+|.++++.=.+-.-+|
T Consensus 59 YknD~RyLklWl~ya~~~~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P 129 (164)
T 2wvi_A 59 YYSDPRFLNLWLKLGRLCNEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEP 129 (164)
T ss_dssp GTTCHHHHHHHHHHHHHCSCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred hccCHHHHHHHHHHHHhcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 4455777788888888777666666 2 24455666668899999999998877765444
No 286
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=21.73 E-value=1.8e+02 Score=22.34 Aligned_cols=54 Identities=15% Similarity=0.249 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhhhh---hhhH-HhhhhHHHHHhhhcchhH------HHHHHHHHHHhccCC
Q 023037 116 REFYQTTLKALEEAKNE---RLWF-KTNLKLCKIWFDMGEYGR------MSKILKELHKSCQRE 169 (288)
Q Consensus 116 ~~~~~~~l~~i~~a~ne---r~~f-~~~~kL~~lyl~~~~y~~------~~~ll~elkk~~~~~ 169 (288)
.++++++.+|++.+++. -+.| .+.=||-.++.+..+-.+ +..+++++.-+...|
T Consensus 43 HQiiElARDCL~KSr~~LITsrYF~El~E~LEkLl~ea~erSes~~~~~v~~lvkKlLiIIsRP 106 (114)
T 1v9v_A 43 HQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVSFIVQLVRKLLIIISRP 106 (114)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhcCchhhhHHHHHHHHHHHHhccCh
Confidence 67779999999998865 3333 777788888887766643 455555555554443
No 287
>2bf9_A Pancreatic hormone; turkey, pancreas, polypeptide, atomic resolution, anisotropic refinement; HET: TYC; 0.99A {Meleagris gallopavo} SCOP: j.6.1.1 PDB: 1ppt_A 2k76_A 2h3s_B* 2h3t_B* 2h4b_C*
Probab=20.77 E-value=89 Score=19.13 Aligned_cols=22 Identities=23% Similarity=0.611 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhh
Q 023037 69 KYKEMMDAYREMLTYIKSAVTRN 91 (288)
Q Consensus 69 ~~~~~l~~~~~~l~~~~~~v~ka 91 (288)
-.+++.++|..++.|+ ..|+|.
T Consensus 13 ~~Eela~Y~~~LrhYi-NlvTRq 34 (36)
T 2bf9_A 13 PVEDLIRFYNDLQQYL-NVVTRH 34 (36)
T ss_dssp CHHHHHHHHHHHHHHH-HHHTTC
T ss_pred CHHHHHHHHHHHHHHH-HHHhcc
Confidence 4678999999999999 777764
Done!