Query 023045
Match_columns 288
No_of_seqs 133 out of 527
Neff 7.7
Searched_HMMs 13730
Date Mon Mar 25 15:25:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023045.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023045hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ak0a_ a.124.1.2 (A:) P1 nucl 100.0 3.1E-70 2.2E-74 489.2 14.8 253 24-287 1-264 (264)
2 d1ah7a_ a.124.1.1 (A:) Bacteri 100.0 1.1E-40 7.7E-45 293.9 1.8 231 20-288 5-240 (245)
3 d1ca1a1 a.124.1.1 (A:1-249) Al 97.3 0.00078 5.7E-08 56.8 10.6 141 26-186 8-156 (249)
4 d1olpa1 a.124.1.1 (A:1-249) Al 95.8 0.0039 2.8E-07 52.3 4.5 221 26-287 8-240 (249)
5 d1jb0m_ f.23.19.1 (M:) Subunit 27.8 10 0.00074 19.9 0.9 23 1-24 1-23 (31)
6 d1y71a1 b.34.16.1 (A:4-127) Ki 14.3 21 0.0015 25.4 0.4 73 147-242 43-115 (124)
7 d2b0la1 a.4.5.66 (A:167-257) G 7.2 1.2E+02 0.0084 19.7 2.1 41 30-70 3-44 (91)
8 d1xrda1 f.3.1.1 (A:1-52) Light 6.5 1.1E+02 0.0083 17.9 1.7 14 134-147 19-32 (52)
9 d1dqia_ b.1.13.1 (A:) Superoxi 6.5 38 0.0027 24.0 -0.7 11 174-184 110-120 (124)
10 d1tlja_ d.282.1.1 (A:) Hypothe 6.4 2.6E+02 0.019 20.6 4.4 31 256-286 158-188 (189)
No 1
>d1ak0a_ a.124.1.2 (A:) P1 nuclease {Penicillium citrinum [TaxId: 5077]}
Probab=100.00 E-value=3.1e-70 Score=489.19 Aligned_cols=253 Identities=32% Similarity=0.528 Sum_probs=219.4
Q ss_pred cChhhHHHHHHHHHhccCHHHHHHHHhhCCCCCCCccccccccccccCc--cCCCCCCcccccCCCC---CCCcccCCCc
Q 023045 24 WGNDGHVAVCRIAQSRLREAAADAVKQLLPESADNDLGSVCTWADHVKF--HYHWSSALHFIDTPDN---LCTYQYNRDC 98 (288)
Q Consensus 24 Wg~~GH~~Va~iA~~~L~~~~~~~l~~lL~~~~~~~~~~~a~WaD~ir~--~~~~~~~wHyid~p~~---~~~~~~~~dc 98 (288)
||.+|||+||+||+++|+|+++++|++||+..+..+|+++|+|||+||+ .++++.+|||+|+|.+ .|.+.+.++|
T Consensus 1 Wg~~GH~~Va~iA~~~L~~~~~~~v~~iL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyvn~p~~~~~~~~~~~~~~~ 80 (264)
T d1ak0a_ 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLHFIDAEDNPPTNCNVDYERDC 80 (264)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHHHHHHHHTCCSTTTTGGGTTHHHHHHTSTTTGGGGGGGCCCCCCBTTTBCCCCHHHHS
T ss_pred CCcHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCceeeeeChHhhcCCCccchhhccccCCCCCCCCccccccccccC
Confidence 9999999999999999999999999999997666789999999999996 6789999999999764 4567777889
Q ss_pred cccCCCCCCcHHHHHHHHHHHhccCCCCCCCcccccHHHHHHHHHHHHhccCCCCccCCCCCCCCCceEEeeccccCCch
Q 023045 99 KDEDGVKGRCVAGAINNYTTQLLSYNSASSSHSEYNLTEALLFLSHFIGDIHQPLHVGFTSDRGGNTIDVHWYTRKQVLH 178 (288)
Q Consensus 99 ~~~~~~~~~cv~~ai~~~~~~L~~~~~~~~~~~~~~~~~aLk~LvHlvGDiHQPLH~~~~~D~GGN~~~V~~~g~~~nLH 178 (288)
+ +++|+++||+++++.|++.+.+ .+++++|||||||||||||||||++ ..|+|||++.|.|+|+++|||
T Consensus 81 ~-----~~~~i~~ai~~~~~~l~~~~~s-----~~~~~~aL~~LvHlvGDiHQPLH~~-~~D~GGN~i~V~~~g~~~NLH 149 (264)
T d1ak0a_ 81 G-----SSGCSISAIANYTQRVSDSSLS-----SENHAEALRFLVHFIGDMTQPLHDE-AYAVGGNKINVTFDGYHDNLH 149 (264)
T ss_dssp C-----TTCCHHHHHHHHHHHHTCTTSC-----HHHHHHHHHHHHHHHHHTTSGGGGC-CHHHHTTTCEEEETTEEEEHH
T ss_pred C-----CCccHHHHHHHHHHHHhcCCCC-----hHHHHHHHHHHHHHHhhcccccccc-CcCCCCCeeEEEECCccCcHH
Confidence 4 5899999999999999987655 4489999999999999999999987 789999999999999999999
Q ss_pred hhhhhhhHhHHHHhccCCCHHHHHHHHHHhhhhh-hHHHHHhHhhccCC--CCCChHHHHHHHHHHHHHhccCCCC---C
Q 023045 179 HVWDNNIIETAEERFYNSNIDGLVDAIQQNITTD-WADLVKKWETCSAN--NTACPDVYASEGIKAACDWAYKGVS---E 252 (288)
Q Consensus 179 ~~WDs~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~~w~~~~~~--~~~~~~~Wa~Es~~la~~~vY~~~~---~ 252 (288)
+||||+|+++.+..+.......+++.|.+++... +.++...|..+... +..||.+|+.||+++||+++|+... .
T Consensus 150 ~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wa~Es~~la~~~~y~~~~~~~~ 229 (264)
T d1ak0a_ 150 SDWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQ 229 (264)
T ss_dssp HHHHTHHHHHHHSCCSHHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTTSTTCSGGGS
T ss_pred HHHhhhHHhhhccccccchHHHHHHHHHHhccccccHHHhhhhhccccccccccCHHHHHHHHHHHHHHHhhcccccccc
Confidence 9999999988765543333456777787777654 67777788665332 3458999999999999999987643 4
Q ss_pred CCCCCHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 023045 253 GSVLEDEYFNSRLPIVKLRLAQGGVRLAATLNRIF 287 (288)
Q Consensus 253 ~~~ls~~Y~~~~~~v~~~ql~~AG~RLA~~Ln~i~ 287 (288)
+.+|+++|+.++++++++||++||+|||.+||+||
T Consensus 230 ~~~l~~~Y~~~~~~i~~~ql~~AG~RLA~~LN~if 264 (264)
T d1ak0a_ 230 TGDLYPTYYDSVIDTIELQIAKGGYRLANWINEIH 264 (264)
T ss_dssp SSBCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56799999999999999999999999999999998
No 2
>d1ah7a_ a.124.1.1 (A:) Bacterial phosholipase C {Bacillus cereus [TaxId: 1396]}
Probab=100.00 E-value=1.1e-40 Score=293.88 Aligned_cols=231 Identities=16% Similarity=0.119 Sum_probs=169.6
Q ss_pred cccccChhhHHHHHHHHHhccCHHHH---HHHHhhCCCCCCCccccccccccccCccC-CCCCCcccccCCCCCCCcccC
Q 023045 20 VIHCWGNDGHVAVCRIAQSRLREAAA---DAVKQLLPESADNDLGSVCTWADHVKFHY-HWSSALHFIDTPDNLCTYQYN 95 (288)
Q Consensus 20 ~a~AWg~~GH~~Va~iA~~~L~~~~~---~~l~~lL~~~~~~~~~~~a~WaD~ir~~~-~~~~~wHyid~p~~~~~~~~~ 95 (288)
...+||..||+.|+.+|.+.|++++. +.+-++|... ..+|.+.++|||+++..+ .++.+|||+|.|.+ +++...
T Consensus 5 ~~~~~g~~tH~~I~~~A~~~L~~d~~~~~~~~~~~l~~y-~~~l~~g~~waD~~~~~~~~~~~~~Hf~~~~~~-~~~~~~ 82 (245)
T d1ah7a_ 5 DKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEW-RTELENGIYAADYENPYYDNSTFASHFYDPDNG-KTYIPF 82 (245)
T ss_dssp SSSCGGGCHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHT-HHHHHHHHHHTTTSTTTTTTTTCGGGCCBTTTT-BCSSTT
T ss_pred CCCCCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHhcCcCccccccccccccCCceeeeCCCC-CCcCCC
Confidence 45799999999999999999988653 3333444322 357999999999999754 47889999997765 565544
Q ss_pred CCccccCCCCCCcHHHHHHHHHHHhccCCCCCCCcccccHHHHHHHHHHHHhccCCCCccCCCCCCCCCceEEeeccccC
Q 023045 96 RDCKDEDGVKGRCVAGAINNYTTQLLSYNSASSSHSEYNLTEALLFLSHFIGDIHQPLHVGFTSDRGGNTIDVHWYTRKQ 175 (288)
Q Consensus 96 ~dc~~~~~~~~~cv~~ai~~~~~~L~~~~~~~~~~~~~~~~~aLk~LvHlvGDiHQPLH~~~~~D~GGN~~~V~~~g~~~ 175 (288)
.+| ..++++.+++.....+++.+.+ ...++|++++|||||||||||++ .|.++|+.+
T Consensus 83 ~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~h~~~d~~qP~H~~----------~v~~~~~~~ 139 (245)
T d1ah7a_ 83 AKQ------AKETGAKYFKLAGESYKNKDMK-------QAFFYLGLSLHYLGDVNQPMHAA----------NFTNLSYPQ 139 (245)
T ss_dssp CCC------HHHHHHHHHHHHHHHHHTTCHH-------HHHHHHHHHHHHHHHHTSTTTTT----------TCCTTSSST
T ss_pred CCC------hHHHHHHHHHHHHHHHhcCCHH-------HHHHHHHHHHHHHhhcCCCcccc----------ccccCCCCC
Confidence 444 3567778888888888775422 45789999999999999999987 266788899
Q ss_pred CchhhhhhhhHhHHHHhccCCCHHHHHHHHHHhhhhh-hHHHHHhHhhccCCCCCChHHHHHHHHHHHHHhccCCCCCCC
Q 023045 176 VLHHVWDNNIIETAEERFYNSNIDGLVDAIQQNITTD-WADLVKKWETCSANNTACPDVYASEGIKAACDWAYKGVSEGS 254 (288)
Q Consensus 176 nLH~~WDs~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~~w~~~~~~~~~~~~~Wa~Es~~la~~~vY~~~~~~~ 254 (288)
|||++||+.+++... .+.......+. ++... ..+....+.. .++.+|+.||..+++. +|...+.+.
T Consensus 140 NLH~~WDs~i~~~~~-~~~~~~~~~~~-----~~~~~~~~~~i~~~~~------~~~~~w~~es~~~~~~-~Y~~~~~~~ 206 (245)
T d1ah7a_ 140 GFHSKYENFVDTIKD-NYKVTDGNGYW-----NWKGTNPEEWIHGAAV------VAKQDYSGIVNDNTKD-WFVKAAVSQ 206 (245)
T ss_dssp THHHHHHHHHHHHGG-GGCCCSSCCCT-----TCSCSCHHHHHHHHHH------HHHHTGGGTSSHHHHH-HHHHHTTCH
T ss_pred CcHHHHHhhHHHhhh-hhhhhHHHHHH-----HHhccCHHHHHHHHhh------cCHHHHHHHHHHHHHH-HhccCCCCC
Confidence 999999999886532 11100100010 11000 0111111222 4678899999998876 787777788
Q ss_pred CCCHHHHhccHHHHHHHHHHHHHHHHHHHHHhhC
Q 023045 255 VLEDEYFNSRLPIVKLRLAQGGVRLAATLNRIFG 288 (288)
Q Consensus 255 ~ls~~Y~~~~~~v~~~ql~~AG~RLA~~Ln~i~~ 288 (288)
.++++|..++.|++++||.+||+|||.+||.+|+
T Consensus 207 ~l~~~Y~~~~~~~v~~rL~~ag~rlAg~Ln~~Fd 240 (245)
T d1ah7a_ 207 EYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD 240 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999984
No 3
>d1ca1a1 a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}
Probab=97.30 E-value=0.00078 Score=56.75 Aligned_cols=141 Identities=17% Similarity=0.127 Sum_probs=75.4
Q ss_pred hhhHHHHHHHHHhccCHHH-------HHHHHhhCCCCCCCccccccccccccCccCCCCCCcccccCCCCCCCcccCCCc
Q 023045 26 NDGHVAVCRIAQSRLREAA-------ADAVKQLLPESADNDLGSVCTWADHVKFHYHWSSALHFIDTPDNLCTYQYNRDC 98 (288)
Q Consensus 26 ~~GH~~Va~iA~~~L~~~~-------~~~l~~lL~~~~~~~~~~~a~WaD~ir~~~~~~~~wHyid~p~~~~~~~~~~dc 98 (288)
..-|..|+.=|.+.|..+. .+.-.++|.+. ...+..-+.|||.=...++ +-..||.|...+ .++......
T Consensus 8 ~~TH~~i~~qA~~iL~nD~~~~~~~~~~~~~~~L~~y-~~~~~~G~~~~D~~~~~y~-~f~~HFy~p~~~-k~~~g~~~~ 84 (249)
T d1ca1a1 8 TGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKEN-MHELQLGSTYPDYDKNAYD-LYQDHFWDPDTD-NNFSKDNSW 84 (249)
T ss_dssp BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGTCTTCCT-TCGGGCCCTTTC-SSTTTCSCC
T ss_pred CchHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH-HHHHhcCCcCcccCCccCc-ccccccccCCCC-CCccCcccc
Confidence 3469999999988875431 12212222211 2357778999997655443 345699876543 222211100
Q ss_pred cccCCCCCCcHHHHHHHHHHHhccC-CCCCCCcccccHHHHHHHHHHHHhccCCCCccCCCCCCCCCceEEeeccccCCc
Q 023045 99 KDEDGVKGRCVAGAINNYTTQLLSY-NSASSSHSEYNLTEALLFLSHFIGDIHQPLHVGFTSDRGGNTIDVHWYTRKQVL 177 (288)
Q Consensus 99 ~~~~~~~~~cv~~ai~~~~~~L~~~-~~~~~~~~~~~~~~aLk~LvHlvGDiHQPLH~~~~~D~GGN~~~V~~~g~~~nL 177 (288)
.-.. .-..........+...-... .... ...--+.|-...|+++|+.||+|++ |... ...+-
T Consensus 85 ~~~~-~~~~~a~~~~~ky~~~A~~~~~~~~----~~~a~~~LG~a~Hy~~D~~~P~Ha~-------N~t~-----~~~~~ 147 (249)
T d1ca1a1 85 YLAY-SIPDTGESQIRKFSALARYEWQRGN----YKQATFYLGEAMHYFGDIDTPYHPA-------NVTA-----VDSAG 147 (249)
T ss_dssp CCSS-CCCCCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHTSSTTTT-------TCCT-----TTCTH
T ss_pred cccc-cccchHHHHHHHHHHHHHHHHHccc----HHHHHHHHHHHHHHHhcCCCccccc-------cccc-----cCccc
Confidence 0000 01233444444444432221 1111 1123477899999999999999986 1111 12345
Q ss_pred hhhhhhhhH
Q 023045 178 HHVWDNNII 186 (288)
Q Consensus 178 H~~WDs~~~ 186 (288)
|+..|+-+-
T Consensus 148 H~~yEn~V~ 156 (249)
T d1ca1a1 148 HVKFETFAE 156 (249)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888643
No 4
>d1olpa1 a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain {Clostridium absonum [TaxId: 29369]}
Probab=95.76 E-value=0.0039 Score=52.31 Aligned_cols=221 Identities=14% Similarity=0.099 Sum_probs=106.3
Q ss_pred hhhHHHHHHHHHhccCH-------HHHHHHHhhCCCCCCCccccccccccccCccCCCCCCcccccCCCCCCCcccCCCc
Q 023045 26 NDGHVAVCRIAQSRLRE-------AAADAVKQLLPESADNDLGSVCTWADHVKFHYHWSSALHFIDTPDNLCTYQYNRDC 98 (288)
Q Consensus 26 ~~GH~~Va~iA~~~L~~-------~~~~~l~~lL~~~~~~~~~~~a~WaD~ir~~~~~~~~wHyid~p~~~~~~~~~~dc 98 (288)
..-|.-|+.-|...|.. +..+.-.++|.+. ...+..-++|||.=...+. +-.-||.|...+ .++.-..+-
T Consensus 8 ~~TH~~I~~qAi~IL~nd~~~~~~~~~~~~~~~l~~~-~~~~~~G~~~aD~d~~~y~-~f~~HFy~pdtg-k~~~g~~~~ 84 (249)
T d1olpa1 8 TGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKN-LHKFQLGSTFPDYDPNAYS-LYQDHFWDPDTD-HNFTQDNKW 84 (249)
T ss_dssp BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGGCTTCCT-TCGGGCCBTTTT-BCHHHHSGG
T ss_pred cchHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHh-HHHHhcCCcCccCCCcccc-ccccccccCCCC-CCCcCCccc
Confidence 35699999999988832 2122111223211 1346677889996322221 123488876443 222111100
Q ss_pred cccCCCCCCcHHHHHHHHHHHhccCCCCCCCcccc-cHHHHHHHHHHHHhccCCCCccCCCCCCCCCceEEeeccccCCc
Q 023045 99 KDEDGVKGRCVAGAINNYTTQLLSYNSASSSHSEY-NLTEALLFLSHFIGDIHQPLHVGFTSDRGGNTIDVHWYTRKQVL 177 (288)
Q Consensus 99 ~~~~~~~~~cv~~ai~~~~~~L~~~~~~~~~~~~~-~~~~aLk~LvHlvGDiHQPLH~~~~~D~GGN~~~V~~~g~~~nL 177 (288)
.... .-..........+...-.+.-... .+ .--+.|-...|+++|+.||+|++ |...| ..+.
T Consensus 85 ~~~~-~~~~~A~~~~~ky~~~A~~~~~~g----~~~~a~~~LG~a~Hy~~D~~qP~Haa-------N~t~v-----~~~~ 147 (249)
T d1olpa1 85 YLSY-AVPDNAESQTRKFATLAKNEWDKG----NYEKAAWYLGQGMHYFGDLNTPYHAA-------NVTAV-----DSPG 147 (249)
T ss_dssp GGGG-CCSCCHHHHHHHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHTSHHHHT-------TCCTT-----TCHH
T ss_pred cccc-cCCccHHHHHHHHHHHHHHHHHcc----CHHHHHHHHHhHhHHhhcCCCCcccc-------ccccc-----cccc
Confidence 0000 012234444444444332211111 11 23478899999999999999985 32222 2235
Q ss_pred hhhhhhhhHhHHHHhccCCCHHHHHHHHHHhhhhhhHHHHHhHhhccCCCCCChHHHHHHHHHHHHHh---cc-CCCCCC
Q 023045 178 HHVWDNNIIETAEERFYNSNIDGLVDAIQQNITTDWADLVKKWETCSANNTACPDVYASEGIKAACDW---AY-KGVSEG 253 (288)
Q Consensus 178 H~~WDs~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~w~~~~~~~~~~~~~Wa~Es~~la~~~---vY-~~~~~~ 253 (288)
|+..++-+-+.. ..+ .-..... .... ......| ...+|.+|..|....+... +| +.. ..
T Consensus 148 H~~yE~yV~~~~-~~Y-~v~~~g~------~~~~--~~~~~~~------~~~~~~ewi~e~a~~~a~~a~~iy~~~~-~~ 210 (249)
T d1olpa1 148 HVKFETYAEERK-DTY-RLDTTGY------NTDD--AFYKDTL------KNDNFNEWSKGYCKYWAKKAKNLYYSHA-TM 210 (249)
T ss_dssp HHHHHHHHHHHG-GGG-CCSCCSS------CTTS--HHHHGGG------SCSCHHHHHHHHHHHHHHHHHHHHHHHC-ST
T ss_pred HHHHHHHHHhhh-hhh-eeccccc------cccc--ccccccc------cCCCHHHHHHHHHHHHHHHHHHHHHHhc-cc
Confidence 888777543221 111 0000000 0000 0011112 2357888888777665442 23 221 12
Q ss_pred CCCCHHHHhccHHHHHHHHHHHHHHHHHHHHHhh
Q 023045 254 SVLEDEYFNSRLPIVKLRLAQGGVRLAATLNRIF 287 (288)
Q Consensus 254 ~~ls~~Y~~~~~~v~~~ql~~AG~RLA~~Ln~i~ 287 (288)
.... .+...++.+.|-.|-.=.|..|...|
T Consensus 211 ~~~~----~~~~~~~~~~L~~Aq~~TAGfi~~f~ 240 (249)
T d1olpa1 211 SNSW----DDWEYAASHGVGNAQKGVAGYLYRFL 240 (249)
T ss_dssp TSCH----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccH----HHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 1222 34557888888888777777776554
No 5
>d1jb0m_ f.23.19.1 (M:) Subunit XII of photosystem I reaction centre, PsaM {Synechococcus elongatus [TaxId: 32046]}
Probab=27.84 E-value=10 Score=19.88 Aligned_cols=23 Identities=22% Similarity=0.504 Sum_probs=15.3
Q ss_pred CCchHHHHHHHHHHHhhccccccc
Q 023045 1 MGLRAYQILTCVSFFVLFPVIHCW 24 (288)
Q Consensus 1 ~~~~~~~~~~~~~l~~~~~~a~AW 24 (288)
|+++--|+.+.+ .+++.|..+||
T Consensus 1 m~lsdtqv~val-vial~pg~laf 23 (31)
T d1jb0m_ 1 MALTDTQVYVAL-VIALLPAVLAF 23 (31)
T ss_dssp CCCCHHHHHHHH-HHHHHHHHHHH
T ss_pred CCchHHHHHHHH-HHHHHHHHHHH
Confidence 777777877755 45555566666
No 6
>d1y71a1 b.34.16.1 (A:4-127) Kinase-associated protein B {Bacillus cereus [TaxId: 1396]}
Probab=14.27 E-value=21 Score=25.37 Aligned_cols=73 Identities=16% Similarity=0.343 Sum_probs=25.9
Q ss_pred hccCCCCccCCCCCCCCCceEEeeccccCCchhhhhhhhHhHHHHhccCCCHHHHHHHHHHhhhhhhHHHHHhHhhccCC
Q 023045 147 GDIHQPLHVGFTSDRGGNTIDVHWYTRKQVLHHVWDNNIIETAEERFYNSNIDGLVDAIQQNITTDWADLVKKWETCSAN 226 (288)
Q Consensus 147 GDiHQPLH~~~~~D~GGN~~~V~~~g~~~nLH~~WDs~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~w~~~~~~ 226 (288)
||+|.|=-+ .|.|+....-|...=-..++...++. |+.....|.+.|...+.. +..+
T Consensus 43 GDLH~p~q~-----------dvpfFHERkALs~~Ek~~ip~~~vk~-y~geipdY~~SLq~A~~~----~~~~------- 99 (124)
T d1y71a1 43 GDLHNVKQA-----------NVPFFHERRALAFREQTNIPEQMVKK-YEGEIPDYTESLKLALET----QMNS------- 99 (124)
T ss_dssp --------------------------CCCCCCTTCEEEEEGGGEEE-CCSCCCCHHHHHHHHHHH----HHHT-------
T ss_pred cCcCCCCcC-----------CccceeehhhcchHHHhcCCHHhccc-cCCCCCCHHHHHHHHHHH----HHHH-------
Confidence 788887432 24454444444332222233333322 333444555666544432 2222
Q ss_pred CCCChHHHHHHHHHHH
Q 023045 227 NTACPDVYASEGIKAA 242 (288)
Q Consensus 227 ~~~~~~~Wa~Es~~la 242 (288)
....-..|+.-|.+.-
T Consensus 100 L~~~~s~~a~~sL~~L 115 (124)
T d1y71a1 100 FSEDDSPFAERSLETL 115 (124)
T ss_dssp TTTCCSHHHHHHHHHH
T ss_pred HhhcCcHHHHHHHHHH
Confidence 1234468888877643
No 7
>d2b0la1 a.4.5.66 (A:167-257) GTP-sensing transcriptional pleiotropic repressor CodY, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=7.18 E-value=1.2e+02 Score=19.72 Aligned_cols=41 Identities=27% Similarity=0.319 Sum_probs=32.5
Q ss_pred HHHHHHHHhccCHHHHHHHHhhCCCCC-CCcccccccccccc
Q 023045 30 VAVCRIAQSRLREAAADAVKQLLPESA-DNDLGSVCTWADHV 70 (288)
Q Consensus 30 ~~Va~iA~~~L~~~~~~~l~~lL~~~~-~~~~~~~a~WaD~i 70 (288)
+.+.++|..-|+....+.++.++.+-. .+-+..++.-||++
T Consensus 3 ka~v~~Ai~tLSySEleAv~hIf~eL~g~EGllvASkiADrv 44 (91)
T d2b0la1 3 KAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRV 44 (91)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHTTSSBTTEEEECHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHcCCCcceEeehhhhhhh
Confidence 568899999999999999999997532 34577777777765
No 8
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=6.55 E-value=1.1e+02 Score=17.90 Aligned_cols=14 Identities=36% Similarity=0.406 Sum_probs=10.2
Q ss_pred cHHHHHHHHHHHHh
Q 023045 134 NLTEALLFLSHFIG 147 (288)
Q Consensus 134 ~~~~aLk~LvHlvG 147 (288)
.--+.|.++||||-
T Consensus 19 ~fL~~LAl~IHfiL 32 (52)
T d1xrda1 19 TFLFVLALLIHFIL 32 (52)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34567888999874
No 9
>d1dqia_ b.1.13.1 (A:) Superoxide reductase (SOR) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=6.54 E-value=38 Score=24.00 Aligned_cols=11 Identities=27% Similarity=0.730 Sum_probs=9.1
Q ss_pred cCCchhhhhhh
Q 023045 174 KQVLHHVWDNN 184 (288)
Q Consensus 174 ~~nLH~~WDs~ 184 (288)
-.|||.+|.+.
T Consensus 110 yCNlHGLWe~~ 120 (124)
T d1dqia_ 110 YCNIHGLWENE 120 (124)
T ss_dssp EETTTEEEEEE
T ss_pred ECcCcccEeee
Confidence 36999999874
No 10
>d1tlja_ d.282.1.1 (A:) Hypothetical protein SSo0622 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=6.43 E-value=2.6e+02 Score=20.65 Aligned_cols=31 Identities=10% Similarity=0.238 Sum_probs=27.6
Q ss_pred CCHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Q 023045 256 LEDEYFNSRLPIVKLRLAQGGVRLAATLNRI 286 (288)
Q Consensus 256 ls~~Y~~~~~~v~~~ql~~AG~RLA~~Ln~i 286 (288)
++++|+.....++.+++.++--||...-+.+
T Consensus 158 V~~eyL~~lv~~aN~kl~~n~~rl~rl~~~l 188 (189)
T d1tlja_ 158 VDKDKIKTLVNVCNEVLARGKQKMNLLKDLL 188 (189)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999998876554
Done!