Your job contains 1 sequence.
>023047
MDTAQWPQEIVVKPIEEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYN
NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSKKLPDPATPPSHHPHQN
PKIHDHGEDLNLSFPAATTQGYRSFSELVQLPNIDNKSQIPISSSTTTTTTTTSSQQLSA
LELLTGISSRGLNSFMPMPVPDPNAIYAPGFPMQDFKPTLNFSLDGLGSGYGSLHHQSVQ
ENNGRLLFPFEDLKQVSSTSDHMEQNREHGDSSGYWTGMLGGGSWWGA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023047
(288 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134981 - symbol:AT4G24060 species:3702 "Arabi... 448 1.1e-52 2
TAIR|locus:2019499 - symbol:AT1G64620 species:3702 "Arabi... 428 3.3e-47 2
TAIR|locus:2079492 - symbol:DAG1 "dof affecting germinati... 492 5.4e-47 1
TAIR|locus:2039959 - symbol:DAG2 "DOF AFFECTING GERMINATI... 350 1.8e-42 2
TAIR|locus:2134658 - symbol:AT4G00940 species:3702 "Arabi... 302 5.5e-32 2
TAIR|locus:2170753 - symbol:HCA2 "HIGH CAMBIAL ACTIVITY2"... 280 7.4e-27 2
TAIR|locus:2144030 - symbol:TMO6 "TARGET OF MONOPTEROS 6"... 296 3.2e-26 1
TAIR|locus:2056588 - symbol:AT2G28510 species:3702 "Arabi... 284 5.9e-25 1
TAIR|locus:2085697 - symbol:DOF6 "DOF transcription facto... 277 3.3e-24 1
TAIR|locus:2181773 - symbol:AT5G02460 species:3702 "Arabi... 275 5.3e-24 1
TAIR|locus:2155755 - symbol:AT5G65590 species:3702 "Arabi... 272 1.1e-23 1
TAIR|locus:2040746 - symbol:DOF2.4 "DNA binding with one ... 270 1.8e-23 1
TAIR|locus:2053175 - symbol:AT2G28810 species:3702 "Arabi... 267 3.8e-23 1
TAIR|locus:2017567 - symbol:DOF1 "DOF zinc finger protein... 265 6.1e-23 1
TAIR|locus:2094746 - symbol:DOF2 "DOF zinc finger protein... 265 6.1e-23 1
TAIR|locus:2079954 - symbol:AT3G52440 species:3702 "Arabi... 262 1.3e-22 1
TAIR|locus:2032153 - symbol:AT1G28310 species:3702 "Arabi... 260 2.1e-22 1
TAIR|locus:2159275 - symbol:OBP4 "OBF binding protein 4" ... 260 2.1e-22 1
TAIR|locus:2026595 - symbol:OBP2 species:3702 "Arabidopsi... 259 2.6e-22 1
TAIR|locus:2154079 - symbol:CDF1 "AT5G62430" species:3702... 225 2.9e-22 2
TAIR|locus:505006172 - symbol:AT1G47655 species:3702 "Ara... 256 5.5e-22 1
TAIR|locus:2027027 - symbol:AT1G21340 species:3702 "Arabi... 255 7.0e-22 1
TAIR|locus:2121041 - symbol:DOF4.7 "DNA binding with one ... 250 2.4e-21 1
TAIR|locus:2158078 - symbol:AT5G66940 species:3702 "Arabi... 249 3.0e-21 1
TAIR|locus:2164860 - symbol:CDF2 "cycling DOF factor 2" s... 234 4.9e-21 2
TAIR|locus:2074850 - symbol:OBP1 "OBF binding protein 1" ... 247 4.9e-21 1
TAIR|locus:2007151 - symbol:AT1G69570 species:3702 "Arabi... 246 1.2e-20 1
TAIR|locus:2079152 - symbol:CDF3 "cycling DOF factor 3" s... 232 1.5e-20 2
TAIR|locus:2133079 - symbol:DOF4.4 "DNA-binding with One ... 237 5.7e-20 1
TAIR|locus:2055506 - symbol:AT2G34140 species:3702 "Arabi... 230 3.1e-19 1
TAIR|locus:2030006 - symbol:AT1G29160 species:3702 "Arabi... 228 5.1e-19 1
TAIR|locus:2133064 - symbol:DOF4.3 "AT4G21040" species:37... 228 5.1e-19 1
TAIR|locus:2127353 - symbol:DOF4.5 "DNA-binding with One ... 224 1.4e-18 1
TAIR|locus:2133149 - symbol:ATDOF4.2 "AT4G21030" species:... 166 1.9e-12 1
>TAIR|locus:2134981 [details] [associations]
symbol:AT4G24060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002343 EMBL:AL161560 HOGENOM:HOG000239394 EMBL:AL109619
EMBL:AY037220 EMBL:BT008771 EMBL:AY087686 IPI:IPI00536658
IPI:IPI00548740 PIR:T13450 RefSeq:NP_567693.1 UniGene:At.3662
STRING:Q8LAP8 PRIDE:Q8LAP8 EnsemblPlants:AT4G24060.1 GeneID:828506
KEGG:ath:AT4G24060 GeneFarm:4472 TAIR:At4g24060 eggNOG:NOG270420
InParanoid:Q8LAP8 OMA:SCSAMAT PhylomeDB:Q8LAP8
ProtClustDB:CLSN2917601 Genevestigator:Q8LAP8 GermOnline:AT4G24060
Uniprot:Q8LAP8
Length = 342
Score = 448 (162.8 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 92/160 (57%), Positives = 104/160 (65%)
Query: 1 MDTAQWPQEIVVKPIEEIVTNTCPKPAS---------AAALERKARPQKEQALNCPRCNS 51
MDTAQWPQEIVVKP+EEIVTNTCPKP + ERKARP+K+QA+NCPRCNS
Sbjct: 1 MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60
Query: 52 TNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPDPAT 111
TNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGG + + +
Sbjct: 61 TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHS 120
Query: 112 PPSHHPHQNPKIHDHGEDL-NLSFPAATTQGYRSFSELVQ 150
S P + DH L ++S T Q + F E Q
Sbjct: 121 D-STQPATKKHLSDHHHHLMSMSQQGLTGQNPK-FLETTQ 158
Score = 115 (45.5 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 32/55 (58%), Positives = 33/55 (60%)
Query: 243 NGRLLFPFEDLK-QVSSTS-----DHME-QNREHGD-----SSGYWTGMLGGGSW 285
NGR LFPFEDLK VSS+S D E Q R G S GYWTGML GGSW
Sbjct: 287 NGRHLFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWTGMLSGGSW 341
>TAIR|locus:2019499 [details] [associations]
symbol:AT1G64620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC009519 EMBL:BT004047 EMBL:BT005148 EMBL:AY084898
IPI:IPI00537731 PIR:E96669 RefSeq:NP_564836.1 UniGene:At.35979
IntAct:Q84JQ8 EnsemblPlants:AT1G64620.1 GeneID:842770
KEGG:ath:AT1G64620 GeneFarm:4460 TAIR:At1g64620 eggNOG:NOG247852
HOGENOM:HOG000239394 InParanoid:Q84JQ8 OMA:KPMNEIV PhylomeDB:Q84JQ8
ProtClustDB:CLSN2917381 Genevestigator:Q84JQ8 GermOnline:AT1G64620
Uniprot:Q84JQ8
Length = 352
Score = 428 (155.7 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 93/170 (54%), Positives = 104/170 (61%)
Query: 1 MDTAQWPQEIVVKPIEEIVTNTCPK-----PASAAALERKARPQKEQALNCPRCNSTNTK 55
MDTA+WPQE VVKP+ EIVTNTC K P+ A +ERKARP+K+QALNCPRCNS NTK
Sbjct: 1 MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60
Query: 56 FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXX-XXXXLPDPA---- 110
FCYYNNYSLTQPRYFCK CRRYWT GGSLRNIPVGGG P +
Sbjct: 61 FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120
Query: 111 --------TPPSHHPHQNPKIHDHGEDLNLSFPAAT-TQGYRSFSELVQL 151
TP PH NPKI GE T +QG+ + E+ L
Sbjct: 121 KPLFANNNTPTPPLPHLNPKI---GEAAATKVQDLTFSQGFGNAHEVKDL 167
Score = 83 (34.3 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 41/114 (35%), Positives = 52/114 (45%)
Query: 179 SALELLTGISSRGLNS-----FMPMPVPDPNAIY-APGFPM-----QDF-KPTLNFXXXX 226
S+LELL GISS +S FM P +++Y A GF + Q+F +P L F
Sbjct: 207 SSLELL-GISSSSASSNSRPAFMSYPNVHDSSVYTASGFGLSYPQFQEFMRPALGFSLDG 265
Query: 227 XXXXXXXXHHQSVQENNGRLLFPFEDLKQ--VSSTSDHM-------EQNREHGD 271
S NNGR L PFE L + VSS+S + E N EH D
Sbjct: 266 GDPLRQ--EEGSSGTNNGRPLLPFESLLKLPVSSSSTNSGGNGNLKENNDEHSD 317
Score = 61 (26.5 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 260 SDHMEQNREHGD---SSGYWTGMLGGGS 284
SDH E +E G+ S G+W+GML G+
Sbjct: 316 SDH-EHEKEEGEADQSVGFWSGMLSAGA 342
>TAIR|locus:2079492 [details] [associations]
symbol:DAG1 "dof affecting germination 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009639 "response to red or far red
light" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002686 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009639 EMBL:AL138642 HOGENOM:HOG000239394
ProtClustDB:CLSN2684099 IPI:IPI00892346 RefSeq:NP_001118885.1
UniGene:At.989 STRING:B3H6D1 PRIDE:B3H6D1 EnsemblPlants:AT3G61850.4
GeneID:825358 KEGG:ath:AT3G61850 OMA:IGHNTIN Genevestigator:B3H6D1
Uniprot:B3H6D1
Length = 324
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 118/281 (41%), Positives = 156/281 (55%)
Query: 28 SAAALE-RKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRN 86
+ A +E RKARPQ++ +NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN
Sbjct: 59 NTATMETRKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRN 116
Query: 87 IPVGGGXXXXXXXXXXXXXLPDPATPPSHHPHQ-NPKI-HDHGEDLNL-SFPAATTQGYR 143
+PVGG +P P + P + +I + +DLNL SFP +
Sbjct: 117 VPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHH 176
Query: 144 SFSELVQLPNIDNKSQIPIXXXXXXXXXXXXXQQLSALELL--TGISSRGLNSFMPMPVP 201
S +P I+N + +SALELL G+SSRG+N+F+P +
Sbjct: 177 GMSHFFHMPKIENNN--------TSSSIYASSSPVSALELLRSNGVSSRGMNTFLPGQMM 228
Query: 202 DPNAI-YAP-GFP-MQDFKPTLNFXXXXXXXXXXXXHH-----QSVQENN------GRLL 247
D N++ Y+ GFP M D+K + N H+ Q Q+NN R+L
Sbjct: 229 DSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVL 288
Query: 248 FPFEDLKQVSSTSDHMEQNREHGDSSGYWTGML---GGGSW 285
FPF D+K++SST+ Q + HG+++ YW GM GG SW
Sbjct: 289 FPFSDMKELSSTT----QEKSHGNNT-YWNGMFSNTGGSSW 324
>TAIR|locus:2039959 [details] [associations]
symbol:DAG2 "DOF AFFECTING GERMINATION 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
[GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0009698
"phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
"cellular modified amino acid biosynthetic process" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0009409
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009845
GO:GO:0009416 EMBL:AC006418 HOGENOM:HOG000239394 EMBL:AJ237810
EMBL:AJ237811 EMBL:BT003328 EMBL:BT008842 IPI:IPI00533417
IPI:IPI00547843 PIR:G84904 RefSeq:NP_001031549.1 RefSeq:NP_182182.2
UniGene:At.43221 PRIDE:Q9ZPY0 EnsemblPlants:AT2G46590.2
GeneID:819271 KEGG:ath:AT2G46590 GeneFarm:4409 TAIR:At2g46590
eggNOG:NOG252364 InParanoid:Q9ZPY0 OMA:NARPNTI PhylomeDB:Q9ZPY0
ProtClustDB:CLSN2684099 Genevestigator:Q9ZPY0 GermOnline:AT2G46590
Uniprot:Q9ZPY0
Length = 369
Score = 350 (128.3 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 82/177 (46%), Positives = 98/177 (55%)
Query: 28 SAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNI 87
+A ERKARPQ++ LNCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+
Sbjct: 66 TAVVAERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNV 123
Query: 88 PVGGGXXXXXXXXXXXXXLPDPATPPSHHPHQNP------KIHDHG----EDLNL-SFPA 136
PVGG T PS P NP +IH+ +DLNL SFP
Sbjct: 124 PVGGSSRKNKRSSSSSSS-NILQTIPSSLPDLNPPILFSNQIHNKSKGSSQDLNLLSFPV 182
Query: 137 ATTQGYRS--FSELVQLPNIDNKSQIPIXX--XXXXXXXXXXXQQLSALELL-TGIS 188
Q + S+ +Q+P ++ I +SALELL TG++
Sbjct: 183 MQDQHHHHVHMSQFLQMPKMEGNGNITHQQQPSSSSSVYGSSSSPVSALELLRTGVN 239
Score = 134 (52.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/166 (32%), Positives = 80/166 (48%)
Query: 146 SELVQLPNIDNKSQIPIXX--XXXXXXXXXXXQQLSALELL-TGI--SSR-GLNS-FMPM 198
S+ +Q+P ++ I +SALELL TG+ SSR G+NS FMP
Sbjct: 194 SQFLQMPKMEGNGNITHQQQPSSSSSVYGSSSSPVSALELLRTGVNVSSRSGINSSFMPS 253
Query: 199 -PVPDPNAI-Y-APGFP-MQDFKPT-LNFXXXXXXXXXXXXHHQ----SVQENNGRLLFP 249
+ D N + Y + GFP M D+KP+ L+F + S GR+LFP
Sbjct: 254 GSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTDHQGLGHNSNNRSEALHSDHHQQGRVLFP 313
Query: 250 FED-LKQVSSTS----DH--MEQNREHGDSS---------GYWTGM 279
F D +K++SS+ DH +Q + HG+++ GYW+GM
Sbjct: 314 FGDQMKELSSSITQEVDHDDNQQQKSHGNNNNNNNSSPNNGYWSGM 359
Score = 116 (45.9 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 42/122 (34%), Positives = 61/122 (50%)
Query: 193 NSFMPM-PVPDPNAI-Y-APGFP-MQDFKPT-LNFXXXXXXXXXXXXHHQ----SVQENN 243
+SFMP + D N + Y + GFP M D+KP+ L+F + S
Sbjct: 248 SSFMPSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTDHQGLGHNSNNRSEALHSDHHQQ 307
Query: 244 GRLLFPFED-LKQVSSTS----DH--MEQNREHGDSS---------GYWTGML---GGGS 284
GR+LFPF D +K++SS+ DH +Q + HG+++ GYW+GM GGGS
Sbjct: 308 GRVLFPFGDQMKELSSSITQEVDHDDNQQQKSHGNNNNNNNSSPNNGYWSGMFSTTGGGS 367
Query: 285 WW 286
W
Sbjct: 368 SW 369
>TAIR|locus:2134658 [details] [associations]
symbol:AT4G00940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009691 "cytokinin biosynthetic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AF013294 EMBL:AL161491
HOGENOM:HOG000239394 EMBL:AB493666 IPI:IPI00517988 PIR:F85012
PIR:T01552 RefSeq:NP_192003.2 UniGene:At.34496 PRIDE:Q9M161
EnsemblPlants:AT4G00940.1 GeneID:827952 KEGG:ath:AT4G00940
GeneFarm:4466 TAIR:At4g00940 eggNOG:NOG310367 PhylomeDB:Q9M161
ProtClustDB:CLSN2915022 Genevestigator:Q9M161 GermOnline:AT4G00940
Uniprot:Q9M161
Length = 294
Score = 302 (111.4 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 68/130 (52%), Positives = 76/130 (58%)
Query: 37 RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXX 96
RPQ+ + NCPRCNS+NTKFCYYNNYSL QPRY CK+CRRYWTEGGSLRN+PVGGG
Sbjct: 63 RPQEPR--NCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKN 120
Query: 97 -------XXXXXXXXXLPDPATPP----SHHPHQNP-KIHDHGEDLNLSFPAAT----TQ 140
LPD PP S NP K H + DL+LSF + Q
Sbjct: 121 KKLPFPNSSTSSSTKNLPD-LNPPFVFTSSASSSNPSKTHQNNNDLSLSFSSPMQDKRAQ 179
Query: 141 G-YRSFSELV 149
G Y FSE V
Sbjct: 180 GHYGHFSEQV 189
Score = 64 (27.6 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 239 VQENNGRLLFPF---EDLKQVSSTS-DHMEQNREHGDSSGYWTGMLGGGSWWG 287
V E ++++P+ ED +Q D + RE G S+ W+G++ GG G
Sbjct: 239 VNEEGSKMMYPYGDHEDRQQHHHVRHDDGNKKREGGSSNELWSGIILGGDSGG 291
>TAIR|locus:2170753 [details] [associations]
symbol:HCA2 "HIGH CAMBIAL ACTIVITY2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0010067 "procambium histogenesis" evidence=IMP] [GO:0010087
"phloem or xylem histogenesis" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0010087
EMBL:AB009053 GO:GO:0010067 HOGENOM:HOG000239394 EMBL:BT020467
EMBL:BT020576 IPI:IPI00528642 RefSeq:NP_201099.1 UniGene:At.29026
EnsemblPlants:AT5G62940.1 GeneID:836414 KEGG:ath:AT5G62940
GeneFarm:4478 TAIR:At5g62940 eggNOG:NOG236688 InParanoid:Q9FM03
OMA:MALAHSH PhylomeDB:Q9FM03 ProtClustDB:CLSN2687377
Genevestigator:Q9FM03 GermOnline:AT5G62940 Uniprot:Q9FM03
Length = 372
Score = 280 (103.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 48/68 (70%), Positives = 57/68 (83%)
Query: 27 ASAAALE--RKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSL 84
A+AA ++ R+ RP + CPRC ST+TKFCYYNNYSL+QPRYFCKTCRRYWT+GG+L
Sbjct: 54 AAAALMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTL 113
Query: 85 RNIPVGGG 92
RNIPVGGG
Sbjct: 114 RNIPVGGG 121
Score = 37 (18.1 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 115 HHPHQNPKIH-DHGEDLN 131
HH H N + +HG LN
Sbjct: 235 HHHHHNHHMGLNHGVGLN 252
>TAIR|locus:2144030 [details] [associations]
symbol:TMO6 "TARGET OF MONOPTEROS 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048364
"root development" evidence=IEP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
HOGENOM:HOG000112244 ProtClustDB:CLSN2684760 EMBL:AB026632
EMBL:BT005866 EMBL:AY086054 IPI:IPI00545477 RefSeq:NP_568920.1
UniGene:At.29177 PaxDb:Q84TE9 PRIDE:Q84TE9
EnsemblPlants:AT5G60200.1 GeneID:836142 KEGG:ath:AT5G60200
GeneFarm:4476 TAIR:At5g60200 eggNOG:NOG268327 OMA:KENATYA
PhylomeDB:Q84TE9 Genevestigator:Q84TE9 GermOnline:AT5G60200
Uniprot:Q84TE9
Length = 257
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 57/96 (59%), Positives = 63/96 (65%)
Query: 21 NTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTE 80
N KP+ A A+ R P E AL CPRC+STNTKFCYYNNYSLTQPRYFCK+CRRYWT+
Sbjct: 34 NDQKKPSPATAVTRPQPP--ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTK 91
Query: 81 GGSLRNIPVGGG-XXXXXXXXXXXXXLPDPATPPSH 115
GG+LRNIPVGGG L P SH
Sbjct: 92 GGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASH 127
>TAIR|locus:2056588 [details] [associations]
symbol:AT2G28510 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC006587
EMBL:AY070421 EMBL:BT001954 EMBL:AY085635 IPI:IPI00520106
PIR:G84685 RefSeq:NP_565673.1 UniGene:At.28359 DNASU:817399
EnsemblPlants:AT2G28510.1 GeneID:817399 KEGG:ath:AT2G28510
GeneFarm:4461 TAIR:At2g28510 eggNOG:NOG301259 HOGENOM:HOG000112244
OMA:GRESWNG PhylomeDB:Q8LE43 ProtClustDB:CLSN2688517
Genevestigator:Q8LE43 GermOnline:AT2G28510 Uniprot:Q8LE43
Length = 288
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 59/117 (50%), Positives = 71/117 (60%)
Query: 42 QALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXX 101
+A NCPRC S NTKFCYYNNYSL+QPRYFCK+CRRYWT+GG+LRN+PVGGG
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105
Query: 102 XXXXLPDPATPPSHH--PHQNPKI---------HDHGEDLNLSFPAATTQGYRSFSE 147
+ + H P QNP I +DH DLNL+F AT Q + S+
Sbjct: 106 SAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAF--ATLQKHHLSSQ 160
>TAIR|locus:2085697 [details] [associations]
symbol:DOF6 "DOF transcription factor 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000112244 EMBL:AJ243033
EMBL:AL138657 EMBL:AY062783 EMBL:BT006284 IPI:IPI00532759
PIR:T47501 RefSeq:NP_190147.1 UniGene:At.478
EnsemblPlants:AT3G45610.1 GeneID:823703 KEGG:ath:AT3G45610
GeneFarm:4402 TAIR:At3g45610 eggNOG:NOG258725 OMA:NISNEQM
PhylomeDB:Q9M1E6 ProtClustDB:CLSN2684760 Genevestigator:Q9M1E6
GermOnline:AT3G45610 Uniprot:Q9M1E6
Length = 245
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/92 (57%), Positives = 59/92 (64%)
Query: 25 KPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSL 84
KP SA R A P EQ+L CPRC+STNTKFCYYNNYSL+QPRYFCK+CRRYWT+GG L
Sbjct: 26 KPLSAT---RPAPP--EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGIL 80
Query: 85 RNIPVGGGXXXXXXXXXXXXXLPDPATPPSHH 116
RNIP+GG L P H
Sbjct: 81 RNIPIGGAYRKHKRSSSATKSLRTTPEPTMTH 112
>TAIR|locus:2181773 [details] [associations]
symbol:AT5G02460 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:AL162874 EMBL:AL162971 EMBL:BX829408
IPI:IPI00547892 PIR:T48267 RefSeq:NP_195866.1 UniGene:At.33412
ProteinModelPortal:Q9LZ56 STRING:Q9LZ56 PRIDE:Q9LZ56
EnsemblPlants:AT5G02460.1 GeneID:830976 KEGG:ath:AT5G02460
GeneFarm:4474 TAIR:At5g02460 eggNOG:NOG272365 InParanoid:Q9LZ56
OMA:HHRAMAN PhylomeDB:Q9LZ56 ProtClustDB:CLSN2916772
Genevestigator:Q9LZ56 GermOnline:AT5G02460 Uniprot:Q9LZ56
Length = 399
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 48/69 (69%), Positives = 55/69 (79%)
Query: 25 KPASAAALERKAR-PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGS 83
+P S A R A P E AL CPRC+STNTKFCY+NNYSLTQPR+FCK CRRYWT GG+
Sbjct: 75 RPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGA 134
Query: 84 LRNIPVGGG 92
LR++PVGGG
Sbjct: 135 LRSVPVGGG 143
>TAIR|locus:2155755 [details] [associations]
symbol:AT5G65590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AB026639 HOGENOM:HOG000090627 EMBL:BT014981 EMBL:BT015717
IPI:IPI00521298 RefSeq:NP_201362.1 UniGene:At.28900
EnsemblPlants:AT5G65590.1 GeneID:836685 KEGG:ath:AT5G65590
GeneFarm:4479 TAIR:At5g65590 eggNOG:NOG306856 InParanoid:Q9LSL6
OMA:SGRENTP PhylomeDB:Q9LSL6 ProtClustDB:CLSN2686628
Genevestigator:Q9LSL6 GermOnline:AT5G65590 Uniprot:Q9LSL6
Length = 316
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 63/157 (40%), Positives = 85/157 (54%)
Query: 11 VVKPIEEIV-TNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRY 69
V KP I T+ KP S++ Q +Q L CPRCNS NTKFCYYNNYSL+QPR+
Sbjct: 13 VPKPDHRISGTSQTKKPPSSSVA------QDQQNLKCPRCNSPNTKFCYYNNYSLSQPRH 66
Query: 70 FCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPDPATPPSHHPHQNPKIHDHGED 129
FCK+CRRYWT GG+LRN+P+GGG + T PS Q ED
Sbjct: 67 FCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPNSSMN---TLPSSSSSQR-FFSSIMED 122
Query: 130 LNLSFPAATTQGYR----SFSELVQLPNIDNKSQIPI 162
+ FP TT ++ S +++ L ++N+ + +
Sbjct: 123 SSKFFPPPTTMDFQLAGLSLNKMNDLQLLNNQEVLDL 159
>TAIR|locus:2040746 [details] [associations]
symbol:DOF2.4 "DNA binding with one finger 2.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:AC004684
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:BT030014 IPI:IPI00519602 PIR:T02525
RefSeq:NP_181295.1 UniGene:At.50120 EnsemblPlants:AT2G37590.1
GeneID:818336 KEGG:ath:AT2G37590 GeneFarm:4464 TAIR:At2g37590
eggNOG:NOG313751 OMA:DEWRSAS PhylomeDB:O80928
ProtClustDB:CLSN2912900 Genevestigator:O80928 GermOnline:AT2G37590
Uniprot:O80928
Length = 330
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 44/52 (84%), Positives = 48/52 (92%)
Query: 41 EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 92
E AL CPRC STNTKFCY+NNYSLTQPR+FCKTCRRYWT GG+LRN+PVGGG
Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGG 137
>TAIR|locus:2053175 [details] [associations]
symbol:AT2G28810 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC005727 EMBL:BT032877 IPI:IPI00541552 PIR:B84689
RefSeq:NP_850126.1 UniGene:At.38565 PRIDE:Q9ZV33
EnsemblPlants:AT2G28810.1 GeneID:817430 KEGG:ath:AT2G28810
GeneFarm:4462 TAIR:At2g28810 eggNOG:NOG301760 HOGENOM:HOG000239956
InParanoid:Q9ZV33 OMA:DPPINWP PhylomeDB:Q9ZV33
ProtClustDB:CLSN2690762 Genevestigator:Q9ZV33 GermOnline:AT2G28810
Uniprot:Q9ZV33
Length = 340
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 45/66 (68%), Positives = 54/66 (81%)
Query: 27 ASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRN 86
A A L + ++P E AL CPRC+S NTKFCY+NNY+LTQPR+FCK CRRYWT GG+LRN
Sbjct: 78 AERARLAKNSQPP-EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRN 136
Query: 87 IPVGGG 92
+PVGGG
Sbjct: 137 VPVGGG 142
>TAIR|locus:2017567 [details] [associations]
symbol:DOF1 "DOF zinc finger protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:AC025294 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010200 HOGENOM:HOG000005865 EMBL:AB017564 IPI:IPI00532555
PIR:T52044 RefSeq:NP_175581.1 UniGene:At.256 PRIDE:O82155
EnsemblPlants:AT1G51700.1 GeneID:841595 KEGG:ath:AT1G51700
GeneFarm:4400 TAIR:At1g51700 eggNOG:NOG318115 InParanoid:O82155
OMA:LASNMQM PhylomeDB:O82155 ProtClustDB:CLSN2679425
Genevestigator:O82155 GermOnline:AT1G51700 Uniprot:O82155
Length = 194
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 56/123 (45%), Positives = 72/123 (58%)
Query: 38 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXX 97
P++EQ L CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG
Sbjct: 28 PEQEQ-LKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSN 86
Query: 98 XXXXXX--XXLPDP--ATPPSHHPHQNPKIHDH--GEDLN-----LSFPAATTQGYRSFS 146
L + A P HH + + + G+++N P G SFS
Sbjct: 87 KRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNG-ASFS 145
Query: 147 ELV 149
L+
Sbjct: 146 SLL 148
>TAIR|locus:2094746 [details] [associations]
symbol:DOF2 "DOF zinc finger protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 EMBL:AB023045 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000005865 ProtClustDB:CLSN2679425
EMBL:AB017565 EMBL:AY045847 EMBL:AY150391 IPI:IPI00526237
PIR:T52045 RefSeq:NP_188764.1 UniGene:At.257
EnsemblPlants:AT3G21270.1 GeneID:821681 KEGG:ath:AT3G21270
GeneFarm:4401 TAIR:At3g21270 eggNOG:NOG280617 InParanoid:Q94AR6
OMA:GMEIGGS PhylomeDB:Q94AR6 Genevestigator:Q94AR6
GermOnline:AT3G21270 Uniprot:Q94AR6
Length = 204
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 49/102 (48%), Positives = 67/102 (65%)
Query: 30 AALERKARPQ--KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNI 87
A +++ +PQ +++ L CPRC+S NTKFCYYNNY+L+QPR+FCK+CRRYWT+GG+LRN+
Sbjct: 13 AKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNV 72
Query: 88 PVGGGXXXXXXXXXXXXXLPDPATPPSHHPHQNPKIHDHGED 129
PVGGG A+ PS+ QN K + D
Sbjct: 73 PVGGGSRKNATKRSTSSS--SSASSPSNSS-QNKKTKNPDPD 111
>TAIR|locus:2079954 [details] [associations]
symbol:AT3G52440 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL050300
IPI:IPI00523054 PIR:T08455 RefSeq:NP_190812.1 UniGene:At.53903
EnsemblPlants:AT3G52440.1 GeneID:824409 KEGG:ath:AT3G52440
GeneFarm:4465 TAIR:At3g52440 eggNOG:NOG271786 InParanoid:Q9SVC5
OMA:YANFLNP PhylomeDB:Q9SVC5 ProtClustDB:CLSN2915499
Genevestigator:Q9SVC5 Uniprot:Q9SVC5
Length = 247
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 44/57 (77%), Positives = 48/57 (84%)
Query: 36 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 92
A E +CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRN+PVGGG
Sbjct: 17 ANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGG 73
>TAIR|locus:2032153 [details] [associations]
symbol:AT1G28310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
EMBL:AC021044 IPI:IPI00656949 RefSeq:NP_001031100.1
UniGene:At.40918 PRIDE:Q2V4K7 EnsemblPlants:AT1G28310.2
GeneID:839725 KEGG:ath:AT1G28310 HOGENOM:HOG000097069 OMA:MIVASSH
ProtClustDB:CLSN2719915 Genevestigator:Q2V4K7 Uniprot:Q2V4K7
Length = 325
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 43/66 (65%), Positives = 56/66 (84%)
Query: 27 ASAAALERKARPQKEQA-LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLR 85
AS+ +++ +PQ+ Q L CPRC+S+NTKFCYYNNYSL+QPR+FCK C+RYWT GG+LR
Sbjct: 23 ASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLR 82
Query: 86 NIPVGG 91
N+PVGG
Sbjct: 83 NVPVGG 88
>TAIR|locus:2159275 [details] [associations]
symbol:OBP4 "OBF binding protein 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AB015472 EMBL:AF155817
EMBL:AY056413 EMBL:AY081709 EMBL:AY085856 IPI:IPI00530257
RefSeq:NP_200893.1 UniGene:At.20219 EnsemblPlants:AT5G60850.1
GeneID:836206 KEGG:ath:AT5G60850 GeneFarm:4392 TAIR:At5g60850
eggNOG:NOG253520 HOGENOM:HOG000090954 OMA:WSQSQWT PhylomeDB:Q8LDR0
ProtClustDB:CLSN2686706 Genevestigator:Q8LDR0 GermOnline:AT5G60850
Uniprot:Q8LDR0
Length = 307
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 48/103 (46%), Positives = 59/103 (57%)
Query: 42 QALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXX 101
Q+L CPRCNS NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRN+PVGGG
Sbjct: 49 QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKT 108
Query: 102 XXXXLPDPATPPS-----HHPHQNPKIHDHGEDLNLSFPAATT 139
A P+ HH + H + S A+ +
Sbjct: 109 KQVPSSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNS 151
>TAIR|locus:2026595 [details] [associations]
symbol:OBP2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0009625 "response to insect" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0010439 "regulation of glucosinolate biosynthetic process"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009595
"detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] [GO:0003002
"regionalization" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GO:GO:0005634 GO:GO:0009753 GO:GO:0009611 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007583 GO:GO:0009625
HOGENOM:HOG000239956 ProtClustDB:CLSN2690762 GO:GO:0010439
GO:GO:0003002 IPI:IPI00657301 RefSeq:NP_001030988.1
UniGene:At.14846 STRING:Q2V4Q1 PRIDE:Q2V4Q1
EnsemblPlants:AT1G07640.3 GeneID:837277 KEGG:ath:AT1G07640
OMA:NIHENNN Genevestigator:Q2V4Q1 Uniprot:Q2V4Q1
Length = 339
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 45/66 (68%), Positives = 53/66 (80%)
Query: 28 SAAALERKAR-PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRN 86
S A R+A P L CPRC+S+NTKFCYYNNY+LTQPR+FCK CRRYWT+GG+LRN
Sbjct: 68 SMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRN 127
Query: 87 IPVGGG 92
+PVGGG
Sbjct: 128 VPVGGG 133
>TAIR|locus:2154079 [details] [associations]
symbol:CDF1 "AT5G62430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048510 "regulation of timing of transition from
vegetative to reproductive phase" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009658 GO:GO:0048510 EMBL:AB015469
EMBL:AB231333 EMBL:AF446362 EMBL:AY143830 IPI:IPI00525269
IPI:IPI00529068 RefSeq:NP_201049.3 UniGene:At.9300 IntAct:Q8W1E3
STRING:Q8W1E3 EnsemblPlants:AT5G62430.1 GeneID:836364
KEGG:ath:AT5G62430 GeneFarm:4477 TAIR:At5g62430 eggNOG:NOG237530
HOGENOM:HOG000239772 InParanoid:Q8W1E3 KO:K16222 OMA:ARIENND
PhylomeDB:Q8W1E3 ProtClustDB:CLSN2920562 Genevestigator:Q8W1E3
GermOnline:AT5G62430 Uniprot:Q8W1E3
Length = 298
Score = 225 (84.3 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 37 RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 92
+P K L CPRCNS TKFCYYNNY++ QPR+FCK C+RYWT GG++R++P+G G
Sbjct: 49 KPTK--ILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAG 102
Score = 48 (22.0 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 235 HHQSVQENNGRLL-FPFEDLKQVSS 258
HH ++ E NG +L F D ++VSS
Sbjct: 116 HHVTISETNGPVLSFSLGDDQKVSS 140
>TAIR|locus:505006172 [details] [associations]
symbol:AT1G47655 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC007519 EMBL:AB493502 IPI:IPI00541489 PIR:E96517
RefSeq:NP_564510.1 UniGene:At.38579 EnsemblPlants:AT1G47655.1
GeneID:841175 KEGG:ath:AT1G47655 GeneFarm:4459 TAIR:At1g47655
eggNOG:NOG248157 HOGENOM:HOG000005865 OMA:GLEISMQ
ProtClustDB:CLSN2917178 Genevestigator:Q9SX97 GermOnline:AT1G47655
Uniprot:Q9SX97
Length = 209
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 40/55 (72%), Positives = 48/55 (87%)
Query: 38 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 92
P + L CPRCNST TKFCYYNNY+L QPRY+CK+CRRYWT+GG+LR++PVGGG
Sbjct: 23 PNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGG 77
>TAIR|locus:2027027 [details] [associations]
symbol:AT1G21340 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC015447
EMBL:DQ446268 IPI:IPI00548608 RefSeq:NP_173556.1 UniGene:At.51708
EnsemblPlants:AT1G21340.1 GeneID:838733 KEGG:ath:AT1G21340
GeneFarm:4455 TAIR:At1g21340 eggNOG:NOG324820 InParanoid:P68349
OMA:GRNENRP PhylomeDB:P68349 ProtClustDB:CLSN2913539
ArrayExpress:P68349 Genevestigator:P68349 Uniprot:P68349
Length = 260
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 42/47 (89%), Positives = 45/47 (95%)
Query: 46 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 92
CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRNIPVGGG
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGG 86
>TAIR|locus:2121041 [details] [associations]
symbol:DOF4.7 "DNA binding with one finger 4.7"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010227 "floral organ abscission"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0010227 EMBL:AL035538 EMBL:BT005767
EMBL:BT006092 IPI:IPI00529950 PIR:T05627 RefSeq:NP_195513.2
UniGene:At.2738 EnsemblPlants:AT4G38000.1 GeneID:829956
KEGG:ath:AT4G38000 GeneFarm:4473 TAIR:At4g38000 eggNOG:NOG286318
HOGENOM:HOG000090627 OMA:TSGNHED PhylomeDB:Q84K52
ProtClustDB:CLSN2918298 Genevestigator:Q84K52 GermOnline:AT4G38000
Uniprot:Q84K52
Length = 246
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 34 RKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 91
++ P + L CPRC+S NTKFCYYNNYSL+QPR++CK CRRYWT GG+LRN+P+GG
Sbjct: 31 KEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGG 88
>TAIR|locus:2158078 [details] [associations]
symbol:AT5G66940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000005865 EMBL:AB026640 EMBL:BT029523 IPI:IPI00549015
RefSeq:NP_201495.1 UniGene:At.66743 DNASU:836828
EnsemblPlants:AT5G66940.1 GeneID:836828 KEGG:ath:AT5G66940
GeneFarm:4480 TAIR:At5g66940 eggNOG:NOG310676 InParanoid:Q9FGD6
OMA:LINYNAA PhylomeDB:Q9FGD6 ProtClustDB:CLSN2916526
ArrayExpress:Q9FGD6 Genevestigator:Q9FGD6 GermOnline:AT5G66940
Uniprot:Q9FGD6
Length = 225
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 39 QKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 91
Q+EQ L+CPRC STNTKFCYYNNY+ +QPR+FCK+CRRYWT GG+LR+IPVGG
Sbjct: 28 QQEQ-LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGG 79
>TAIR|locus:2164860 [details] [associations]
symbol:CDF2 "cycling DOF factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000239772 EMBL:AB012243
EMBL:AY056804 EMBL:BT015791 IPI:IPI00544938 RefSeq:NP_568567.1
RefSeq:NP_851106.1 UniGene:At.26292 IntAct:Q93ZL5 STRING:Q93ZL5
PRIDE:Q93ZL5 EnsemblPlants:AT5G39660.1 EnsemblPlants:AT5G39660.2
GeneID:833962 KEGG:ath:AT5G39660 GeneFarm:4475 TAIR:At5g39660
eggNOG:NOG255195 InParanoid:Q93ZL5 OMA:ANFHESS PhylomeDB:Q93ZL5
ProtClustDB:CLSN2689899 Genevestigator:Q93ZL5 GermOnline:AT5G39660
Uniprot:Q93ZL5
Length = 457
Score = 234 (87.4 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 28 SAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNI 87
+A + E K + + ++ L CPRCNS TKFCYYNNY++ QPR+FCK C+RYWT GG++RN+
Sbjct: 123 TACSQEGKLK-KPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNV 181
Query: 88 PVGGG 92
PVG G
Sbjct: 182 PVGAG 186
Score = 39 (18.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 186 GISSRGLNSFMPMPVPDPNAIYAPGFP 212
G+S NSF MP P+ + P P
Sbjct: 320 GVSPGAWNSFTWMPQPNSPSGSNPNSP 346
>TAIR|locus:2074850 [details] [associations]
symbol:OBP1 "OBF binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0042545 "cell wall modification"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009751 GO:GO:0045787 GO:GO:0042545 EMBL:AL132976
HOGENOM:HOG000005865 EMBL:X89192 IPI:IPI00523996 PIR:T46072
RefSeq:NP_190610.1 UniGene:At.20758 IntAct:Q39088 PRIDE:Q39088
EnsemblPlants:AT3G50410.1 GeneID:824205 KEGG:ath:AT3G50410
GeneFarm:4389 TAIR:At3g50410 eggNOG:NOG293819 InParanoid:Q39088
OMA:EPRRIAM PhylomeDB:Q39088 Genevestigator:Q39088
GermOnline:AT3G50410 Uniprot:Q39088
Length = 253
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 39 QKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 92
Q+EQ L CPRC+S+NTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR++PVGGG
Sbjct: 26 QQEQ-LPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGG 78
>TAIR|locus:2007151 [details] [associations]
symbol:AT1G69570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC073178 HOGENOM:HOG000239772 EMBL:AF079504 EMBL:AC021046
EMBL:AK176346 EMBL:BT025623 IPI:IPI00525897 PIR:D96717 PIR:T51953
RefSeq:NP_177116.1 UniGene:At.10732 STRING:Q9SEZ3
EnsemblPlants:AT1G69570.1 GeneID:843293 KEGG:ath:AT1G69570
GeneFarm:4399 TAIR:At1g69570 eggNOG:NOG236464 OMA:RINDTNT
PhylomeDB:Q9SEZ3 ProtClustDB:CLSN2682558 Genevestigator:Q9SEZ3
GermOnline:AT1G69570 Uniprot:Q9SEZ3
Length = 399
Score = 246 (91.7 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 42/76 (55%), Positives = 50/76 (65%)
Query: 17 EIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRR 76
EI T T S +P K + CPRC S NTKFCYYNNY++ QPRYFC+ C+R
Sbjct: 107 EITTTTTTSTTSGEKSTALKKPDK--LIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQR 164
Query: 77 YWTEGGSLRNIPVGGG 92
YWT GGS+RN+PVG G
Sbjct: 165 YWTAGGSMRNVPVGSG 180
>TAIR|locus:2079152 [details] [associations]
symbol:CDF3 "cycling DOF factor 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AL132955 HOGENOM:HOG000239772
EMBL:AF079503 EMBL:AY065152 EMBL:AY128757 EMBL:AY084628
IPI:IPI00547330 PIR:T45710 RefSeq:NP_190334.1 UniGene:At.519
IntAct:Q8LFV3 STRING:Q8LFV3 EnsemblPlants:AT3G47500.1 GeneID:823904
KEGG:ath:AT3G47500 GeneFarm:4398 TAIR:At3g47500 eggNOG:NOG295870
InParanoid:Q8LFV3 OMA:KDNETER PhylomeDB:Q8LFV3
ProtClustDB:CLSN2915701 Genevestigator:Q8LFV3 GermOnline:AT3G47500
Uniprot:Q8LFV3
Length = 448
Score = 232 (86.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 16 EEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCR 75
++I ++ P+ + K + + L CPRC S TKFCYYNNY++ QPR+FCK C+
Sbjct: 82 DQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQ 141
Query: 76 RYWTEGGSLRNIPVGGG 92
RYWT GG++RN+PVG G
Sbjct: 142 RYWTAGGTMRNVPVGAG 158
Score = 36 (17.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 200 VPDPNAIYAPGFPMQDFKP 218
+P P PG+PM F P
Sbjct: 303 MPPPGFYPPPGYPMP-FYP 320
>TAIR|locus:2133079 [details] [associations]
symbol:DOF4.4 "DNA-binding with One Finger 4.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010154 "fruit development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:2000032 "regulation of secondary shoot formation" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010154 HOGENOM:HOG000097076 ProtClustDB:CLSN2685338
GO:GO:2000032 EMBL:AB493689 IPI:IPI00543578 PIR:T10647
RefSeq:NP_193837.1 UniGene:At.54450 PRIDE:Q9SUA9 DNASU:827852
EnsemblPlants:AT4G21050.1 GeneID:827852 KEGG:ath:AT4G21050
GeneFarm:4469 TAIR:At4g21050 eggNOG:NOG287569 OMA:NYSESQP
PhylomeDB:Q9SUA9 Genevestigator:Q9SUA9 GermOnline:AT4G21050
Uniprot:Q9SUA9
Length = 210
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 38/46 (82%), Positives = 42/46 (91%)
Query: 46 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 91
CPRC+S NTKFC+YNNYS +QPRYFCK CRRYWT GG+LRNIPVGG
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGG 71
>TAIR|locus:2055506 [details] [associations]
symbol:AT2G34140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002341 EMBL:BT010496 EMBL:AK221308 IPI:IPI00538613
PIR:H84752 RefSeq:NP_180961.1 UniGene:At.43132
EnsemblPlants:AT2G34140.1 GeneID:817975 KEGG:ath:AT2G34140
GeneFarm:4463 TAIR:At2g34140 eggNOG:NOG326560 HOGENOM:HOG000090574
InParanoid:O22967 OMA:IACPRCK PhylomeDB:O22967
ProtClustDB:CLSN2679679 Genevestigator:O22967 GermOnline:AT2G34140
Uniprot:O22967
Length = 170
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 14 PIEEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKT 73
P E+ T + +S++ L + RP K + CPRC S TKFCY+NNY++ QPR+FCK
Sbjct: 31 PPEQEAT-IAVRSSSSSDLTAEKRPDK--IIACPRCKSMETKFCYFNNYNVNQPRHFCKG 87
Query: 74 CRRYWTEGGSLRNIPVGGG 92
C RYWT GG+LRN+PVG G
Sbjct: 88 CHRYWTAGGALRNVPVGAG 106
>TAIR|locus:2030006 [details] [associations]
symbol:AT1G29160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC021043 HOGENOM:HOG000090574 ProtClustDB:CLSN2679679
EMBL:BT029990 IPI:IPI00521362 RefSeq:NP_174211.1 UniGene:At.64845
EnsemblPlants:AT1G29160.1 GeneID:839790 KEGG:ath:AT1G29160
GeneFarm:4458 TAIR:At1g29160 eggNOG:NOG279976 InParanoid:P68350
OMA:LRCYTDG PhylomeDB:P68350 ArrayExpress:P68350
Genevestigator:P68350 GermOnline:AT1G29160 Uniprot:P68350
Length = 175
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 40/73 (54%), Positives = 50/73 (68%)
Query: 20 TNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWT 79
T P+S E+ RP K + CPRC S TKFCY+NNY++ QPR+FCK C+RYWT
Sbjct: 42 TTAVRSPSSDLTAEK--RPDK--IIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWT 97
Query: 80 EGGSLRNIPVGGG 92
GG+LRN+PVG G
Sbjct: 98 AGGALRNVPVGAG 110
>TAIR|locus:2133064 [details] [associations]
symbol:DOF4.3 "AT4G21040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 EMBL:AB493688
IPI:IPI00544172 PIR:T10646 RefSeq:NP_193836.1 UniGene:At.64193
DNASU:827851 EnsemblPlants:AT4G21040.1 GeneID:827851
KEGG:ath:AT4G21040 GeneFarm:4468 TAIR:At4g21040 eggNOG:NOG279085
PhylomeDB:Q9SUB0 Genevestigator:Q9SUB0 Uniprot:Q9SUB0
Length = 232
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 36/46 (78%), Positives = 40/46 (86%)
Query: 46 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 91
C RC+S NTKFCYYNNYS QPRYFCK CRRYWT GG+LRN+P+GG
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGG 72
>TAIR|locus:2127353 [details] [associations]
symbol:DOF4.5 "DNA-binding with One Finger 4.5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL021960
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 eggNOG:NOG279085
EMBL:AB493690 IPI:IPI00526819 PIR:T04939 RefSeq:NP_193840.1
UniGene:At.64194 DNASU:827855 EnsemblPlants:AT4G21080.1
GeneID:827855 KEGG:ath:AT4G21080 GeneFarm:4470 TAIR:At4g21080
OMA:ARMVSVE PhylomeDB:O49550 Genevestigator:O49550
GermOnline:AT4G21080 Uniprot:O49550
Length = 249
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 36/46 (78%), Positives = 39/46 (84%)
Query: 46 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 91
C RC+S NTKFCYYNNY QPRYFCK CRRYWT GG+LRNIP+GG
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGG 72
>TAIR|locus:2133149 [details] [associations]
symbol:ATDOF4.2 "AT4G21030" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010214 "seed coat development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048359 "mucilage metabolic process involved seed coat
development" evidence=IMP] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:2000032 "regulation of secondary shoot formation"
evidence=IMP] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0048825 EMBL:AB493687 IPI:IPI00542373
PIR:T10645 RefSeq:NP_193835.1 UniGene:At.54449
EnsemblPlants:AT4G21030.1 GeneID:827850 KEGG:ath:AT4G21030
GeneFarm:4467 TAIR:At4g21030 eggNOG:NOG254967 HOGENOM:HOG000097076
OMA:QPRYKCK PhylomeDB:Q9SUB1 ProtClustDB:CLSN2685338
Genevestigator:Q9SUB1 GO:GO:0048359 GO:GO:2000032 Uniprot:Q9SUB1
Length = 194
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 29/46 (63%), Positives = 32/46 (69%)
Query: 46 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGG 91
CPRC S T+F Y+NN +QPRY CK C R WT GG LRNIPV G
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTG 68
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 288 250 0.00080 114 3 11 22 0.49 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 603 (64 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.47u 0.10s 22.57t Elapsed: 00:00:01
Total cpu time: 22.47u 0.10s 22.57t Elapsed: 00:00:01
Start: Sat May 11 08:17:39 2013 End: Sat May 11 08:17:40 2013