BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023050
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 77 VEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLA 136
VE++ ++P A ++ N + E E + LA+P ++++TV +S TG+ + + R S +L
Sbjct: 318 VEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLK 377
Query: 137 RGRDKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGG 192
D +I + +RI DFT E LQV +Y G Y+PHFD+ E F T N G
Sbjct: 378 GDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTG 437
Query: 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSM 252
R+ATVL Y+S E GG TVF N L G ++ P DAL ++++
Sbjct: 438 NRIATVLFYMSQPERGGATVF-------------NHL------GTAVFPSKNDALFWYNL 478
Query: 253 KPDASLDPSSLHGGCPVIKGNKWSSTKWI 281
+ D D + H CPV+ G KW S KWI
Sbjct: 479 RRDGEGDLRTRHAACPVLLGVKWVSNKWI 507
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKI 142
+PR +H+ +S E E + +LA P + ++TV D +TGK ++ R S +L+ D +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPV 393
Query: 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATV 198
+ I RI D T + E LQV +Y G +YEPHFD+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASL 258
L Y+SDV GG TVFP + G S+ PK G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHGGCPVIKGNKWSSTKWIR 282
D S+ H CPV+ GNKW S KW+
Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLH 518
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 102/203 (50%), Gaps = 23/203 (11%)
Query: 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKI 142
+PR + + +S EE E + LA P + ++TV D +TGK + R S +L+ +
Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPV 375
Query: 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATV 198
+ I RI D T + E LQV +Y G +YEPHFD+ D F G R+AT
Sbjct: 376 VSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATW 435
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASL 258
L Y+SDV GG TVFP + G S+ PK G A+ ++++ P
Sbjct: 436 LFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFPSGEG 476
Query: 259 DPSSLHGGCPVIKGNKWSSTKWI 281
D S+ H CPV+ GNKW S KW+
Sbjct: 477 DYSTRHAACPVLVGNKWVSNKWL 499
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKI 142
+PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPV 393
Query: 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATV 198
+ I RI D T + E LQV +Y G +YEPHFD+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASL 258
L Y+SDV GG TVFP + G S+ PK G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHGGCPVIKGNKWSSTKWIR 282
D S+ H CPV+ GNKW S KW+
Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKI 142
+PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ + +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPV 393
Query: 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATV 198
+ I RI D T + E LQV +Y G +YEPHFD+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASL 258
L Y+SDV GG TVFP + G S+ PK G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHGGCPVIKGNKWSSTKWIR 282
D S+ H CPV+ GNKW S KW+
Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLH 518
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKI 142
+PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ + +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPV 393
Query: 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATV 198
+ I RI D T + E LQV +Y G +YEPHFD+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASL 258
L Y+SDV GG TVFP + G S+ PK G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHGGCPVIKGNKWSSTKWIR 282
D S+ H CPV+ GNKW S KW+
Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKI 142
+PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ + +
Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPV 393
Query: 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATV 198
+ I RI D T + E LQV +Y G +YEPHFD+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASL 258
L Y+SDV GG TVFP + G S+ PK G A+ ++++
Sbjct: 454 LFYMSDVLAGGATVFP-------------------EVGASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHGGCPVIKGNKWSSTKWIR 282
D S+ H CPV+ GNKW S KW+
Sbjct: 495 DYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 84 PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKII 143
P Y++ +S EE E + LA P + ++TV D TG + R S ++L D ++
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 396
Query: 144 RDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT--KNGGQRMATVLMY 201
+ +R+ T ++ E LQV +Y G +YEPHFD+ F++ K+ G R+AT L Y
Sbjct: 397 AKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNY 456
Query: 202 LSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPS 261
+SDVE GG TVFP+ G +I PK G A+ ++++ D
Sbjct: 457 MSDVEAGGATVFPDF-------------------GAAIWPKKGTAVFWYNLFRSGEGDYR 497
Query: 262 SLHGGCPVIKGNKWSSTKWI--RVNEY 286
+ H CPV+ G KW S KW R NE+
Sbjct: 498 TRHAACPVLVGCKWVSNKWFHERGNEF 524
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 25/217 (11%)
Query: 77 VEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLA 136
VE+ + P A ++ + +S +E + LA P + ++TV DS TGK + R S +L
Sbjct: 321 VEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLK 380
Query: 137 RGRDKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGG 192
++ + KRI T +E E LQ+ +Y G Y+PHFD+ E F + G
Sbjct: 381 EWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTG 440
Query: 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSM 252
R+ATVL Y+S GG TVF A+ +I P DAL ++++
Sbjct: 441 NRIATVLFYMSQPSHGGGTVFTEAKS-------------------TILPTKNDALFWYNL 481
Query: 253 KPDASLDPSSLHGGCPVIKGNKWSSTKWI--RVNEYK 287
+P + H CPV+ G KW S KWI + NE++
Sbjct: 482 YKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNEFR 518
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 84 PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKII 143
P Y++ +S EE E + +A P + ++TV D TG + R S ++L D ++
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 395
Query: 144 RDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYF----MDEFNTKNGGQRMATVL 199
+ +R+ T ++ E LQV +Y G +YEPHFD+ D F G R+AT L
Sbjct: 396 ARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFL 455
Query: 200 MYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLD 259
Y+SDVE GG TVFP+ G +I PK G A+ ++++ D
Sbjct: 456 NYMSDVEAGGATVFPD-------------------LGAAIWPKKGTAVFWYNLLRSGEGD 496
Query: 260 PSSLHGGCPVIKGNKWSSTKWI 281
+ H CPV+ G KW S KW
Sbjct: 497 YRTRHAACPVLVGCKWVSNKWF 518
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 84 PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKII 143
P Y++ +S EE E + +A P + ++TV D TG + R S ++L D ++
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 397
Query: 144 RDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVL 199
+ +R+ T ++ E LQV +Y G +YEPHFD+ D F G R+AT L
Sbjct: 398 ARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFL 457
Query: 200 MYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLD 259
Y+SDVE GG TVFP+ G +I PK G A+ ++++ D
Sbjct: 458 NYMSDVEAGGATVFPD-------------------LGAAIWPKKGTAVFWYNLLRSGEGD 498
Query: 260 PSSLHGGCPVIKGNKWSSTKWI 281
+ H CPV+ G KW S KW
Sbjct: 499 YRTRHAACPVLVGCKWVSNKWF 520
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 78 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAR 137
EVI P +YH+F+S EE + + LA P +++S V + K R S +L
Sbjct: 340 EVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKD 397
Query: 138 GRDKIIRDIEKRIADFTFFPLE--NGEGLQVLHYEAGQKYEPHFDYFMDE---FNTKNGG 192
D ++ +++RIA T ++ E LQV++Y G YEPHFD+ G
Sbjct: 398 TVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSG 457
Query: 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-S 251
R AT+++YLS VE GG T F GN S P + +A LFW +
Sbjct: 458 NRAATLMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWN 497
Query: 252 MKPDASLDPSSLHGGCPVIKGNKWSSTKWI 281
+ D +LH GCPV+ G+KW + KWI
Sbjct: 498 LHRSGEGDDDTLHAGCPVLVGDKWVANKWI 527
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 100/211 (47%), Gaps = 28/211 (13%)
Query: 78 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAR 137
EVI EP +YH+F+S E + + LA P +++S V + K R S +L
Sbjct: 340 EVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVASGE--KQLPVEYRISKSAWLKD 397
Query: 138 GRDKIIRDIEKRIADFTFFPLE--NGEGLQVLHYEAGQKYEPHFDYFMDE---FNTKNGG 192
D ++ ++ RIA T ++ E LQV++Y G YEPHFD+ N G
Sbjct: 398 TVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSG 457
Query: 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-S 251
R+AT ++YLS VE GG T F GN S P + +A LFW +
Sbjct: 458 NRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWN 497
Query: 252 MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 282
+ D +LH CPV+ G+KW + KWI
Sbjct: 498 LHRSGEGDGDTLHAACPVLVGDKWVANKWIH 528
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 78 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAR 137
EV+ P +YH+F+S EE + + LA P +++S V + K R S +L
Sbjct: 338 EVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKD 395
Query: 138 GRDKIIRDIEKRIADFTFFPLE--NGEGLQVLHYEAGQKYEPHFDYFMDE---FNTKNGG 192
D ++ ++ RIA T ++ E LQV++Y G YEPHFD+ G
Sbjct: 396 TVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSG 455
Query: 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-S 251
R+AT ++YLS VE GG T F GN S P + +A LFW +
Sbjct: 456 NRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWN 495
Query: 252 MKPDASLDPSSLHGGCPVIKGNKWSSTKWI 281
+ D +LH GCPV+ G+KW + KWI
Sbjct: 496 LHRSGEGDGDTLHAGCPVLVGDKWVANKWI 525
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 78 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAR 137
EVI EP +YH+F+S E + + LA P +++S V + K R S +L
Sbjct: 340 EVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKD 397
Query: 138 GRDKIIRDIEKRIADFTFFPLE--NGEGLQVLHYEAGQKYEPHFDYFMDE---FNTKNGG 192
D + + RIA T + E LQV++Y G YEPHFD+ G
Sbjct: 398 TVDPKLVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSG 457
Query: 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSM 252
R+AT ++YLS VE GG T F A LS+ AL +W++
Sbjct: 458 NRVATFMIYLSSVEAGGATAFIYAN-------------------LSVPVVRNAALFWWNL 498
Query: 253 KPDASLDPSSLHGGCPVIKGNKWSSTKWIR 282
D +LH GCPV+ G+KW + KWI
Sbjct: 499 HRSGEGDSDTLHAGCPVLVGDKWVANKWIH 528
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 33/205 (16%)
Query: 85 RAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIR 144
+ FV +N ++ +C+ ++ A + DS D +R S ++++ + +++
Sbjct: 59 KPFVLNNLINPTKCQEIMQFAN-----GKLFDSQVLSGTDKNIRNSQQMWISKN-NPMVK 112
Query: 145 DIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMD------EFNTKNGGQRMATV 198
I + I P +N E LQV+ Y Q Y H D D EF + GGQR+ TV
Sbjct: 113 PIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEF-IERGGQRILTV 171
Query: 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAS- 257
L+YL++ G T FPN KPK GDAL+F+ + +++
Sbjct: 172 LIYLNNEFSDGHTYFPNLNQ-------------------KFKPKTGDALVFYPLANNSNK 212
Query: 258 LDPSSLHGGCPVIKGNKWSSTKWIR 282
P SLH G PV G KW + W R
Sbjct: 213 CHPYSLHAGMPVTSGEKWIANLWFR 237
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 85/195 (43%), Gaps = 42/195 (21%)
Query: 127 VRTSSGTFLARGR--DKIIRDIEKRIADFTFFP---LENGEGLQVLHYEAGQKYEPHFD- 180
VR S T+L +G I+R I +R+ T +E E LQV+ Y G Y H D
Sbjct: 272 VRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDS 331
Query: 181 -------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWN 227
+E R TVL YL++V GGETVFP A ++
Sbjct: 332 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YD 386
Query: 228 ELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAS-----LDPSSLHGGCPV 269
E+S C K L +KP+ G A+ +++ PD +D SLHGGC V
Sbjct: 387 EMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLV 446
Query: 270 IKGNKWSSTKWIRVN 284
+G KW + WI V+
Sbjct: 447 TRGTKWIANNWINVD 461
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 85/195 (43%), Gaps = 42/195 (21%)
Query: 127 VRTSSGTFLARGR--DKIIRDIEKRIADFTFFP---LENGEGLQVLHYEAGQKYEPHFD- 180
VR S T+L +G ++R I +R+ T +E E LQV+ Y G Y H D
Sbjct: 273 VRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYHAHVDS 332
Query: 181 -------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWN 227
+E R TVL YL++V GGETVFP A ++
Sbjct: 333 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YD 387
Query: 228 ELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAS-----LDPSSLHGGCPV 269
E+S C K L +KP+ G A+ +++ PD +D SLHGGC V
Sbjct: 388 EMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHGGCLV 447
Query: 270 IKGNKWSSTKWIRVN 284
+G KW + WI V+
Sbjct: 448 TRGTKWIANNWINVD 462
>sp|Q0AP20|Y1675_MARMM PKHD-type hydroxylase Mmar10_1675 OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1675 PE=3 SV=1
Length = 219
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 35/120 (29%)
Query: 166 VLHYEAGQKYEPHFDYFMDEFNTKNGGQRM-ATVLMYLSDVE--EGGETVFPNAQGNISA 222
V Y G Y PH D + GG+R + ++LSD + +GGE V G
Sbjct: 83 VSRYRDGMAYGPHID------DALMGGRRADLSFTLFLSDPDSYDGGELVMDGPDGETE- 135
Query: 223 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 282
IK GDA+++ + S++H PV +G + + W+R
Sbjct: 136 ----------------IKLAAGDAVVYAT---------SAIHQVAPVTRGERVAVVGWVR 170
>sp|Q0WT31|PMTP_ARATH Probable methyltransferase PMT25 OS=Arabidopsis thaliana
GN=At2g34300 PE=1 SV=2
Length = 770
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 1 MAKPRYSRFPTRKSSSSTLILTLLIMFTFAILILLAF-GILSMPSSSGDSRKANDLSSIV 59
MA +YSR +KSSS L +T++++ + ++ F S P+ S + +
Sbjct: 1 MAMGKYSRVDGKKSSSYGLTITIVLLLSLCLVGTWMFMSSWSAPADSAGYSSTDTAKDVS 60
Query: 60 RKSMERSEGD 69
+ + + EGD
Sbjct: 61 KNDLRKEEGD 70
>sp|B2A2Y9|RECF_NATTJ DNA replication and repair protein RecF OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=recF PE=3 SV=1
Length = 386
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 68 GDEGRAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRV 127
G RA++ E+I WE F L KE+ +Y + + T + GK+K+ +V
Sbjct: 49 GKSHRAQKEKELIRWETSGFYLKGELEKEQAQYTLEIITNYQ---------NGKNKNLKV 99
Query: 128 RTSSGT 133
S T
Sbjct: 100 NNLSQT 105
>sp|O19023|CEL3B_MACMU Chymotrypsin-like elastase family member 3B (Fragment) OS=Macaca
mulatta GN=CELA3B PE=2 SV=1
Length = 257
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 205 VEEGGETVFPNAQGNISAVPWWNELS-ECGK----TGLSIKPKMGDALLFWSMKPDASLD 259
V+EG E V P G++ P WN L CG LS ++GDA+ S+ P +
Sbjct: 79 VKEGPEQVIPINSGDLFVHPLWNRLCVACGNDIALIKLSRSAQLGDAVQLASLPPAGDIL 138
Query: 260 PS 261
P+
Sbjct: 139 PN 140
>sp|Q973C8|SYT_SULTO Threonine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thrS PE=3 SV=1
Length = 540
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 144 RDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLS 203
R I +R+ F+F P E GL + HY+ GQ FM+E N G Q + T +Y S
Sbjct: 136 RIIGERLDLFSF-PDETAPGLALFHYK-GQIIRKELMKFMEEINESMGYQEVFTAEIYRS 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,199,578
Number of Sequences: 539616
Number of extensions: 4768364
Number of successful extensions: 10676
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 10612
Number of HSP's gapped (non-prelim): 34
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)