Query 023050
Match_columns 288
No_of_seqs 217 out of 1164
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:30:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023050.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023050hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 9.5E-55 3.2E-59 386.7 20.1 213 71-287 7-221 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 2.1E-51 7.2E-56 364.1 13.0 190 72-287 27-216 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 8.5E-34 2.9E-38 255.0 9.1 174 76-283 11-195 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 2.8E-24 9.5E-29 193.7 17.1 173 83-287 25-217 (247)
5 3kt7_A PKHD-type hydroxylase T 99.2 1.7E-10 6E-15 114.1 15.9 115 146-285 106-230 (633)
6 2rg4_A Uncharacterized protein 98.6 2.7E-07 9.2E-12 81.0 12.0 100 163-282 104-206 (216)
7 2a1x_A Phytanoyl-COA dioxygena 98.0 0.00017 5.8E-09 65.5 15.4 187 84-283 34-254 (308)
8 2rdq_A 1-deoxypentalenic acid 98.0 3.7E-05 1.3E-09 69.0 10.5 189 78-284 26-253 (288)
9 2fct_A Syringomycin biosynthes 98.0 0.00015 5.1E-09 66.0 14.5 185 84-282 21-259 (313)
10 3emr_A ECTD; double stranded b 97.5 0.00013 4.5E-09 67.0 6.1 185 80-282 43-267 (310)
11 2opw_A Phyhd1 protein; double- 97.4 0.00069 2.4E-08 60.8 10.4 95 172-281 150-264 (291)
12 3gja_A CYTC3; halogenase, beta 97.2 0.0027 9.1E-08 58.4 11.1 183 83-282 23-261 (319)
13 2iuw_A Alkylated repair protei 97.1 0.007 2.4E-07 53.4 12.3 168 84-279 40-226 (238)
14 3i3q_A Alpha-ketoglutarate-dep 96.5 0.034 1.2E-06 48.2 12.5 108 142-279 85-199 (211)
15 3s57_A Alpha-ketoglutarate-dep 96.5 0.035 1.2E-06 47.7 12.2 174 80-279 6-199 (204)
16 3nnf_A CURA; non-HAEM Fe(II)/a 96.0 0.007 2.4E-07 55.4 5.2 128 83-214 40-176 (344)
17 3tht_A Alkylated DNA repair pr 95.6 0.047 1.6E-06 50.8 9.3 138 81-250 108-259 (345)
18 1w9y_A 1-aminocyclopropane-1-c 88.7 2.6 8.7E-05 38.3 10.1 88 163-283 156-253 (319)
19 1gp6_A Leucoanthocyanidin diox 82.2 8.3 0.00028 35.4 10.2 88 163-284 211-308 (356)
20 1dcs_A Deacetoxycephalosporin 80.7 7.3 0.00025 35.1 9.1 107 145-283 132-267 (311)
21 3pl0_A Uncharacterized protein 79.6 3.9 0.00013 36.2 6.7 71 193-287 171-251 (254)
22 3oox_A Putative 2OG-Fe(II) oxy 70.7 21 0.00071 32.0 9.3 107 144-283 143-271 (312)
23 1odm_A Isopenicillin N synthas 64.8 23 0.0008 31.9 8.4 106 143-283 153-288 (331)
24 2wbq_A L-arginine beta-hydroxy 49.7 15 0.0005 33.4 4.3 43 236-286 296-342 (358)
25 2og5_A Putative oxygenase; non 49.2 14 0.00049 33.7 4.1 43 236-286 291-337 (357)
26 3on7_A Oxidoreductase, iron/as 48.8 35 0.0012 30.0 6.5 88 163-283 151-254 (280)
27 1nx8_A CARC, carbapenem syntha 45.3 21 0.0007 30.9 4.4 42 234-283 229-272 (273)
28 3dqy_A Toluene 1,2-dioxygenase 43.6 44 0.0015 24.5 5.5 48 199-272 5-52 (106)
29 2pp6_A Gifsy-2 prophage ATP-bi 43.2 25 0.00084 26.7 3.8 26 239-285 62-87 (102)
30 1otj_A Alpha-ketoglutarate-dep 38.7 31 0.0011 29.9 4.5 41 236-284 235-276 (283)
31 3o2g_A Gamma-butyrobetaine dio 35.5 21 0.00071 33.1 2.9 45 234-286 326-373 (388)
32 1ds1_A Clavaminate synthase 1; 32.8 36 0.0012 30.3 4.0 42 235-284 258-303 (324)
33 1o51_A Hypothetical protein TM 30.9 47 0.0016 25.4 3.8 73 97-169 31-113 (114)
34 1otj_A Alpha-ketoglutarate-dep 30.4 43 0.0015 29.0 4.0 36 175-216 96-131 (283)
35 1vm9_A Toluene-4-monooxygenase 29.7 89 0.0031 22.9 5.2 49 199-272 5-54 (111)
36 3pvj_A Alpha-ketoglutarate-dep 29.6 39 0.0013 29.6 3.6 36 173-214 92-127 (277)
37 1oih_A Putative alkylsulfatase 29.1 44 0.0015 29.3 3.9 39 237-283 245-284 (301)
38 2i7f_A Ferredoxin component of 28.2 1.3E+02 0.0045 21.8 5.9 50 197-272 5-55 (108)
39 2qpz_A Naphthalene 1,2-dioxyge 27.8 95 0.0033 22.4 5.0 48 199-272 7-54 (103)
40 3gce_A Ferredoxin component of 25.6 78 0.0027 23.9 4.3 51 196-272 11-61 (121)
41 2dbn_A Hypothetical protein YB 25.5 24 0.00082 33.8 1.4 77 192-281 296-402 (461)
42 4aiv_A Probable nitrite reduct 25.0 1.9E+02 0.0064 21.8 6.4 55 194-272 8-62 (119)
43 3r1j_A Alpha-ketoglutarate-dep 24.5 56 0.0019 29.0 3.7 36 173-214 98-133 (301)
44 3eat_X Pyoverdine biosynthesis 24.0 76 0.0026 27.9 4.5 41 235-283 240-281 (293)
45 2q4a_A Clavaminate synthase-li 22.6 40 0.0014 30.0 2.3 36 235-279 292-327 (330)
46 2q4a_A Clavaminate synthase-li 21.8 41 0.0014 30.0 2.2 40 171-216 113-152 (330)
47 1nx8_A CARC, carbapenem syntha 21.1 51 0.0017 28.3 2.6 38 173-216 96-135 (273)
48 1oih_A Putative alkylsulfatase 20.0 82 0.0028 27.5 3.8 37 173-215 103-139 (301)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=9.5e-55 Score=386.72 Aligned_cols=213 Identities=58% Similarity=1.005 Sum_probs=195.6
Q ss_pred CCCcceEEEEecCCCEEEEcCCCCHHHHHHHHHHhcCcCCCceeEeCCCCCccccceeeccceeecCCccHHHHHHHHHH
Q 023050 71 GRAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRI 150 (288)
Q Consensus 71 ~~~~~~~e~ls~~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d~vv~~i~~ri 150 (288)
++.+.|+|+||++|+|++|+||||++||++||+++++.+.+++++++.+|....+++|+|+++|++...++++++|++||
T Consensus 7 ~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~ri 86 (224)
T 2jig_A 7 EEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRV 86 (224)
T ss_dssp CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHHH
T ss_pred cccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999988777777889999999999976689999999999
Q ss_pred HhhcCCCCCCCcccEEEecCCCCccccccccccccccc--CCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCccc
Q 023050 151 ADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT--KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNE 228 (288)
Q Consensus 151 ~~~~~~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~--~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~ 228 (288)
.+++++|...+|++||+||++||+|++|+|++....+. ..+++|++|+++||||+++||||+||... ..+.|+.
T Consensus 87 ~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~----~~~~~~~ 162 (224)
T 2jig_A 87 AQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAE----QKVTGDG 162 (224)
T ss_dssp HHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSS----SCCCSTT
T ss_pred HHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcc----ccccccc
Confidence 99999999999999999999999999999998653221 34689999999999999999999999864 2356888
Q ss_pred ccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccccEEEEEEeeeecccc
Q 023050 229 LSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 287 (288)
Q Consensus 229 ~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
+++|.+.+++|+|++|+||||+|+++||++|++++|+||||++|+||++++|++.++|+
T Consensus 163 ~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~ 221 (224)
T 2jig_A 163 WSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIG 221 (224)
T ss_dssp SCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCC
T ss_pred ccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcC
Confidence 89999889999999999999999999999999999999999999999999999999986
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=2.1e-51 Score=364.08 Aligned_cols=190 Identities=43% Similarity=0.733 Sum_probs=168.5
Q ss_pred CCcceEEEEecCCCEEEEcCCCCHHHHHHHHHHhcCcCCCceeEeCCCCCccccceeeccceeecCCccHHHHHHHHHHH
Q 023050 72 RAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIA 151 (288)
Q Consensus 72 ~~~~~~e~ls~~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d~vv~~i~~ri~ 151 (288)
.....+++++++|+|++++||||++||++|++++++.+++|++... ...+++|+|+++|++. ++++++|++||+
T Consensus 27 ~r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~----~~~~~~RtS~~~wl~~--~~~v~~i~~Ri~ 100 (216)
T 3itq_A 27 DREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS----RDVNDIRTSSGAFLDD--NELTAKIEKRIS 100 (216)
T ss_dssp SCEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC--CHHHHHHHHHHH
T ss_pred CceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC----CccCCcEeeeeEEeCC--cHHHHHHHHHHH
Confidence 3566889999999999999999999999999999998888887211 3567899999999987 789999999999
Q ss_pred hhcCCCCCCCcccEEEecCCCCcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCcccccc
Q 023050 152 DFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSE 231 (288)
Q Consensus 152 ~~~~~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~ 231 (288)
+++|+|.+.+|++||+||++||+|++|+|++.... ....++|++|+++||||+++||||+||..
T Consensus 101 ~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~-~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~--------------- 164 (216)
T 3itq_A 101 SIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHS-RSAANNRISTLVMYLNDVEEGGETFFPKL--------------- 164 (216)
T ss_dssp HHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTS-GGGGGCEEEEEEEECSCCSEECCEEETTT---------------
T ss_pred HhcCceeccccceeEEEeCCCCccccccCCCcCCC-cccCCceEEEEEEecccCCcCceeEecCC---------------
Confidence 99999999999999999999999999999986421 12358999999999999999999999973
Q ss_pred cCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccccEEEEEEeeeecccc
Q 023050 232 CGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 287 (288)
Q Consensus 232 c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
+++|+|++|+||+|+|+++||++|++++|+||||++|+||++++|+|.++||
T Consensus 165 ----~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~~ 216 (216)
T 3itq_A 165 ----NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK 216 (216)
T ss_dssp ----TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCCC
T ss_pred ----CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCcC
Confidence 7999999999999999999999999999999999999999999999999996
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=8.5e-34 Score=255.04 Aligned_cols=174 Identities=21% Similarity=0.258 Sum_probs=136.9
Q ss_pred eEEEEecCCCEEEEcCCCCHHHHHHHHHHhcCcCCCceeEeCC-CCCccccceeeccceeecCCccHHHHHHHHHHHhhc
Q 023050 76 WVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSD-TGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFT 154 (288)
Q Consensus 76 ~~e~ls~~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s~v~~~~-~g~~~~~~~Rts~~~~l~~~~d~vv~~i~~ri~~~~ 154 (288)
.-|-+-.++.+++|+||||++||++||++++.. .+.++. +++....++|+|. ++.. ++++++.|.+||.+++
T Consensus 11 ~~~~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~----~~~dg~~t~g~~~~~vr~n~--~l~~-d~~~~~~l~~~i~~~l 83 (243)
T 3dkq_A 11 HHENLYFQGMLIEIPNVFSKQEVSHLREQLDAR----RWIDGNQTSGAMATTRKRNQ--QLDK-DDPVAVALGQQIMDRL 83 (243)
T ss_dssp ---CCCCBTTBEEECCSSCHHHHHHHHHHHHTS----CCEEECCCSSBSSCCCEEEE--ECCT-TCHHHHHHHHHHHHHH
T ss_pred cccccccCCCEEEECCCCCHHHHHHHHHHHhhC----CCccCcccCCCccccceeee--EECC-CCHHHHHHHHHHHHHH
Confidence 345567789999999999999999999999753 233322 3334556788775 4443 3689999999999987
Q ss_pred CCC--------CCCCcccEEEecCCCCcccccccccccccccCCCCceEEEEEEEecC--CCCCceeeecCCCCCCCCCC
Q 023050 155 FFP--------LENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSD--VEEGGETVFPNAQGNISAVP 224 (288)
Q Consensus 155 ~~p--------~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND--~~eGGeT~Fp~~~~~~s~~~ 224 (288)
+.. ....|++|++||++|++|++|+|++..... ..+.+|.+|+++|||| +++||||+|+...
T Consensus 84 ~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~-~~~~~r~~T~~lYLndp~~~~GGetvf~~~~------- 155 (243)
T 3dkq_A 84 LAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTP-DGMIRTDLSATLFLSEPENYQGGELVIQDTY------- 155 (243)
T ss_dssp HTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEET-TEEEECCEEEEEECSCGGGEEECCEEEEETT-------
T ss_pred ccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCC-CccccceEEEEEEeCCCCCCCCceEEEeeCC-------
Confidence 654 134578999999999999999999864210 0123689999999999 6799999999742
Q ss_pred CcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccccEEEEEEeeee
Q 023050 225 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 283 (288)
Q Consensus 225 ~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+.+|+|++|++|+|++ .++|+||||++|+||++++|++.
T Consensus 156 ----------~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 156 ----------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp ----------EEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEEEEE
T ss_pred ----------CcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEehhh
Confidence 35789999999999985 58999999999999999999995
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.92 E-value=2.8e-24 Score=193.71 Aligned_cols=173 Identities=20% Similarity=0.283 Sum_probs=128.1
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcC-----cCCCceeEeCCCCCccccceeeccceeecCCcc--H----HHHHHHHHHH
Q 023050 83 EPRAFVYHNFLSKEECEYLINLATP-----HMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRD--K----IIRDIEKRIA 151 (288)
Q Consensus 83 ~P~i~vi~nfLs~~EC~~Li~~a~~-----~~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d--~----vv~~i~~ri~ 151 (288)
.+.+++++|||+++||++|++.++. .+.++.+... ......++|++..+|++.... + +.+.+.+.+.
T Consensus 25 ~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 25 KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp HTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 3557899999999999999999975 3666666542 233567899999999987431 2 2344444333
Q ss_pred hhcC-CCCC---CCcccEEEecCC-CCcccccccccccccccCCCCceEEEEEEEecCC----CCCceeeecCCCCCCCC
Q 023050 152 DFTF-FPLE---NGEGLQVLHYEA-GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV----EEGGETVFPNAQGNISA 222 (288)
Q Consensus 152 ~~~~-~p~~---~~E~lqv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~----~eGGeT~Fp~~~~~~s~ 222 (288)
.+.. +... ..+++|+.+|.+ |++|.+|.|... +.+|.+|+++||||. +.||+|.|.....
T Consensus 103 ~ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---- 171 (247)
T 2hbt_A 103 HCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---- 171 (247)
T ss_dssp HTTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC----
T ss_pred HHhhhcCcccccccceEEEEEecCCCCcccccccCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC----
Confidence 3222 1111 125799999996 999999999832 357999999999995 4699998765321
Q ss_pred CCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccccEEEEEEeeeecccc
Q 023050 223 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 287 (288)
Q Consensus 223 ~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
.....|.|+.|++|+|.+ +.+++|+++|+ .|.||+++.||+.++.+
T Consensus 172 -----------~~~~~v~P~~grlv~F~s-------~~~~~H~V~p~-~~~R~sit~W~~~~~~~ 217 (247)
T 2hbt_A 172 -----------AQFADIEPKFDRLLFFWS-------DRRNPHEVQPA-YATRYAITVWYFDADER 217 (247)
T ss_dssp -----------SSCEEECCBTTEEEEEEC-------STTCCEEECCB-SSCEEEEEEEEEEHHHH
T ss_pred -----------CceEEEEcCCCEEEEEec-------CCCceeeeccC-CCEEEEEEEEEcCCchh
Confidence 134789999999999986 23589999996 68999999999987653
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.22 E-value=1.7e-10 Score=114.07 Aligned_cols=115 Identities=19% Similarity=0.261 Sum_probs=86.0
Q ss_pred HHHHHHhhcCC-CCC-CCcccEEEecCCCCcccccccccccccccCCCCceEEEEEEEecCC------CCCceeeecCCC
Q 023050 146 IEKRIADFTFF-PLE-NGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV------EEGGETVFPNAQ 217 (288)
Q Consensus 146 i~~ri~~~~~~-p~~-~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~------~eGGeT~Fp~~~ 217 (288)
+.+-+++++|+ ++. .--.+++.+|..|++|.+|.|.+ +.|.+|+++|||+. +.||++.+...+
T Consensus 106 Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d 176 (633)
T 3kt7_A 106 YRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFPSI 176 (633)
T ss_dssp HHHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECCEE
T ss_pred HHHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEecCC
Confidence 34556677888 442 23469999999999999999954 24999999999983 369999987643
Q ss_pred CCCCCCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCC-CCcccccccc-cccEEEEEEeeeecc
Q 023050 218 GNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDP-SSLHGGCPVI-KGNKWSSTKWIRVNE 285 (288)
Q Consensus 218 ~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~-~~lH~g~PV~-~G~K~i~~~W~~~~~ 285 (288)
.+.. | . ......|.|+.|+++||.+ .+ .++|++.||. ...|+++++|||.+.
T Consensus 177 ~~~~--P----~---~d~~~~I~P~fNrLV~F~v-------sp~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 177 LPNV--P----H---SDPSAKLVPQFNQIAFFKV-------LPGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp ETTE--E----C---SSCSEEECCCTTEEEEEEC-------CTTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred CcCC--C----C---CCceEEEecCCCeEEEEEc-------CCCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 1000 0 0 1135789999999999986 22 7999999998 458999999999874
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.63 E-value=2.7e-07 Score=81.00 Aligned_cols=100 Identities=18% Similarity=0.094 Sum_probs=70.1
Q ss_pred ccEEEecCCCCcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCC-CCCCc-ccccccCCcCeEEe
Q 023050 163 GLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNIS-AVPWW-NELSECGKTGLSIK 240 (288)
Q Consensus 163 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s-~~~~~-~~~~~c~~~~l~V~ 240 (288)
+.-+..|.+|++|++|.|. ++.+|.++|||.++.||++.|.+...... ..+.- .+...-......|+
T Consensus 104 ~~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVA 172 (216)
T ss_dssp EEEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEEC
T ss_pred eEEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEec
Confidence 4556899999999999873 47899999999998999999976421100 00000 00000001124899
Q ss_pred CCCceEEEEecCCCCCCCCCCCccccccccc-ccEEEEEEeee
Q 023050 241 PKMGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSSTKWIR 282 (288)
Q Consensus 241 Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~W~~ 282 (288)
|+.|++|+|++ ...|++.|... ++|+++..-+.
T Consensus 173 P~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~~ 206 (216)
T 2rg4_A 173 PKVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNYA 206 (216)
T ss_dssp CCTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEEE
T ss_pred CCCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEee
Confidence 99999999996 69999999876 58888766554
No 7
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.99 E-value=0.00017 Score=65.49 Aligned_cols=187 Identities=16% Similarity=0.149 Sum_probs=95.6
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcCcCCCc-----ee-EeCC-CCCcc-ccceeeccceeecCCccHHHH------HHHHH
Q 023050 84 PRAFVYHNFLSKEECEYLINLATPHMRKS-----TV-VDSD-TGKSK-DSRVRTSSGTFLARGRDKIIR------DIEKR 149 (288)
Q Consensus 84 P~i~vi~nfLs~~EC~~Li~~a~~~~~~s-----~v-~~~~-~g~~~-~~~~Rts~~~~l~~~~d~vv~------~i~~r 149 (288)
...+++++||+++||+.|.+.++..+... .. .... .+... ....+.-..+. .-..++.+. +|.+.
T Consensus 34 dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~p~l~~~ 112 (308)
T 2a1x_A 34 NGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQ-DFQEDKELFRYCTLPEILKY 112 (308)
T ss_dssp HSEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----EECCEEE-CCTTSHHHHHHHHCHHHHHH
T ss_pred CCEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHHHHhhhh-hhhhCHHHHHHHhCHHHHHH
Confidence 34569999999999999999887532211 00 0000 00000 00001000110 001233332 34455
Q ss_pred HHhhcCCCCCCCcccEEEecCC-CCc---ccccccccccccccCCCCceEEEEEEEecCCC-CCceeeecCCCCCCCC--
Q 023050 150 IADFTFFPLENGEGLQVLHYEA-GQK---YEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVFPNAQGNISA-- 222 (288)
Q Consensus 150 i~~~~~~p~~~~E~lqv~rY~~-G~~---y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-eGGeT~Fp~~~~~~s~-- 222 (288)
+++++|-++-.....-+.+... |+. ..||.|...-. .....+.+|+.++|.|+. ++|.|.|-...-....
T Consensus 113 ~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~---~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~ 189 (308)
T 2a1x_A 113 VECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFP---FRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKP 189 (308)
T ss_dssp HHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCC---EECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCC
T ss_pred HHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCcccc---CCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCcccc
Confidence 6666664322111222233332 332 47999974311 111247899999999985 6788877432111110
Q ss_pred --CCCccc--------cccc--CCcCeEEeCCCceEEEEecCCCCCCCCCCCccccccccc-ccEEEEEEeeee
Q 023050 223 --VPWWNE--------LSEC--GKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSSTKWIRV 283 (288)
Q Consensus 223 --~~~~~~--------~~~c--~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~W~~~ 283 (288)
-+.|.. +.+. ....+.+.-++|+++||. ..++|++.|..+ ..|+++...+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 190 HDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISCHFAS 254 (308)
T ss_dssp CCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEEEEEE
T ss_pred ccccccccCccccccCCccccccCCeEEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEEEEEC
Confidence 011211 1111 124578888999999995 589999999876 478888766544
No 8
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.97 E-value=3.7e-05 Score=69.02 Aligned_cols=189 Identities=14% Similarity=0.065 Sum_probs=99.1
Q ss_pred EEEecCCCEEEEcCCCCHHHHHHHHHHhcCcCCCceeEeCCCCCccccceee-cc--ceeecC--CccHHH--HHHHHHH
Q 023050 78 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRT-SS--GTFLAR--GRDKII--RDIEKRI 150 (288)
Q Consensus 78 e~ls~~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s~v~~~~~g~~~~~~~Rt-s~--~~~l~~--~~d~vv--~~i~~ri 150 (288)
+.+..+. .++++++|+++||+.|.+.++..+......+..+. ......+. .. ..++.. .-..++ .+|.+.+
T Consensus 26 ~~f~~dG-yvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~ 103 (288)
T 2rdq_A 26 SFYEEHG-YLFLRNVLDRDLVKTVAEQMREGLVALGAADPHAT-LEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVF 103 (288)
T ss_dssp HHHHHHS-EEEECSCSCHHHHHHHHHHHHHHHHHHSCCCTTCC-TTTCCCSCSTTSCHHHHHHHCCHHHHHTSHHHHHHH
T ss_pred HHHHhCC-EEEEeCCCCHHHHHHHHHHHHHHHHhcCCCCCCCC-cchhhhhhhcccccccccchHHHHHHHcCHHHHHHH
Confidence 3343344 46899999999999999998754221111011000 00000000 00 000000 000111 2344455
Q ss_pred HhhcCCCCCCCcccEEEecCC----------CCcccccccccccccccCCCCceEEEEEEEecCCC-CCceeee-cCCCC
Q 023050 151 ADFTFFPLENGEGLQVLHYEA----------GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQG 218 (288)
Q Consensus 151 ~~~~~~p~~~~E~lqv~rY~~----------G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-eGGeT~F-p~~~~ 218 (288)
++++|-+.-.. ..++.+..+ |....||.|.... ....+.+|+.++|.|+. +.|.+.| |....
T Consensus 104 ~~llG~~~~l~-~~~~~~~~p~~~~~k~p~~g~~~~wHqD~~~~-----~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~ 177 (288)
T 2rdq_A 104 EQVFGEPVFVF-LSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYI-----GPNQDFRTFWIPLIRTTRESGGVALADGSHR 177 (288)
T ss_dssp HHHHSSCEEEE-EEEEEEEECCCTTCSSCCCTTSCCSBCHHHHS-----CSCCCCEEEEEESSCCCTTTCEEEEETTTTS
T ss_pred HHHhCCCceee-eeeeeeecCCcccccccCcCCCcCcccccccc-----CCCCCeEEEEEECCCCCccCCcEEEEeCCcc
Confidence 55666442111 122333223 4567899998532 12346899999999985 6677776 43321
Q ss_pred CCCCCCC-cc------------ccc-c--cCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc----cEEEEE
Q 023050 219 NISAVPW-WN------------ELS-E--CGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG----NKWSST 278 (288)
Q Consensus 219 ~~s~~~~-~~------------~~~-~--c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G----~K~i~~ 278 (288)
....+. |. .+. + .....+.+.-++|+++||. ..++|++.|..+. .||++.
T Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGdv~lf~---------~~~~H~s~~N~s~~~R~~R~s~~ 247 (288)
T 2rdq_A 178 -RGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFH---------AHMCHKSIPNLSKDPRLMRMSMD 247 (288)
T ss_dssp -SCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECCCCCTTCEEEEE---------TTCCEEEECCCCCTTCCCEEEEE
T ss_pred -ccccccccchhhhccCcccccCCCccccccCceeecccCCCCEEEEe---------CCceecCCCCCCCCccceEEEEE
Confidence 111010 10 000 0 0112356777999999996 5899999999876 378998
Q ss_pred Eeeeec
Q 023050 279 KWIRVN 284 (288)
Q Consensus 279 ~W~~~~ 284 (288)
.|+...
T Consensus 248 ~~~~~~ 253 (288)
T 2rdq_A 248 TRVQPA 253 (288)
T ss_dssp EEEEET
T ss_pred EEEecC
Confidence 888654
No 9
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.96 E-value=0.00015 Score=65.97 Aligned_cols=185 Identities=12% Similarity=0.109 Sum_probs=95.5
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcCcCCCc--eeEeCCCCCcccc-ceeeccceeecCCccHHH------HHHHHHHHhhc
Q 023050 84 PRAFVYHNFLSKEECEYLINLATPHMRKS--TVVDSDTGKSKDS-RVRTSSGTFLARGRDKII------RDIEKRIADFT 154 (288)
Q Consensus 84 P~i~vi~nfLs~~EC~~Li~~a~~~~~~s--~v~~~~~g~~~~~-~~Rts~~~~l~~~~d~vv------~~i~~ri~~~~ 154 (288)
...++++++|+++||+.+.+.+...+... .+... +..... ..|.....+ . .++.+ .+|.+.+++++
T Consensus 21 dGyvvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~p~l~~~~~~ll 95 (313)
T 2fct_A 21 NGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD--LDAISGGTNIANYDRH--L-DDDFLASHICRPEICDRVESIL 95 (313)
T ss_dssp HSEEEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCC--CCC----CGGGGBCGG--G-TCHHHHHHTTCHHHHHHHHHHH
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHHHhccccccccc--ccccCCccchhccccc--c-ccHHHHHHHcChHHHHHHHHHc
Confidence 44579999999999999987765432111 11110 000000 011111001 0 12222 24455666677
Q ss_pred CCCCCCCcccEEEecCCCCcccccccccccccc-------cCCCCc-eEEEEEEEecCCC-CCceeee-cCCCCCCC-CC
Q 023050 155 FFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFN-------TKNGGQ-RMATVLMYLSDVE-EGGETVF-PNAQGNIS-AV 223 (288)
Q Consensus 155 ~~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~-------~~~~~~-R~~T~liYLND~~-eGGeT~F-p~~~~~~s-~~ 223 (288)
|-++-.....-+.+...++...||.|...-... ...... +.+|+.++|.|+. +.|.|.| |....... ..
T Consensus 96 G~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~~ 175 (313)
T 2fct_A 96 GPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDE 175 (313)
T ss_dssp CSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBCT
T ss_pred CCCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCcccc
Confidence 733221112223344334446899997531100 000011 6799999999985 6677777 43321100 00
Q ss_pred -CC--cc----------------------cccc------cCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccc--
Q 023050 224 -PW--WN----------------------ELSE------CGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI-- 270 (288)
Q Consensus 224 -~~--~~----------------------~~~~------c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~-- 270 (288)
.. ++ ++.. -....+.+.-++|+++||. ..++|++.|..
T Consensus 176 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~l~H~s~~N~~s 246 (313)
T 2fct_A 176 TKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPHSGE 246 (313)
T ss_dssp TSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEE---------TTSEEEECCBCSS
T ss_pred ccccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEe---------CCceeeCCCCCCC
Confidence 00 00 0100 1124578899999999996 58999999998
Q ss_pred cc-cEEEEEEeee
Q 023050 271 KG-NKWSSTKWIR 282 (288)
Q Consensus 271 ~G-~K~i~~~W~~ 282 (288)
+. .|+++..-+.
T Consensus 247 s~~~R~a~~~~y~ 259 (313)
T 2fct_A 247 SQEMRMGFASRYV 259 (313)
T ss_dssp SSSCEEEEEEEEE
T ss_pred CCCceEEEEEEEE
Confidence 43 6777765443
No 10
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.47 E-value=0.00013 Score=66.97 Aligned_cols=185 Identities=14% Similarity=0.074 Sum_probs=95.2
Q ss_pred EecCCCEEEEcCCCCHHHHHHHHHHhcCcCCCc-------eeEeCCCCCccccceeeccceeecCCccHHHH------HH
Q 023050 80 ISWEPRAFVYHNFLSKEECEYLINLATPHMRKS-------TVVDSDTGKSKDSRVRTSSGTFLARGRDKIIR------DI 146 (288)
Q Consensus 80 ls~~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s-------~v~~~~~g~~~~~~~Rts~~~~l~~~~d~vv~------~i 146 (288)
+..+. .++++|+|+++||+.|.+.++..+... .+... .| ..+|.-...+ . .++.+. +|
T Consensus 43 f~~dG-yvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~-~~----~~~r~~~~~~--~-~~~~f~~l~~~p~l 113 (310)
T 3emr_A 43 YEKNG-FLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREP-ES----NDIRSIFHVH--Q-DDNYFQDVANDKRI 113 (310)
T ss_dssp HHHHS-EEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECT-TT----CCEEEEECHH--H-HCHHHHHHHTCHHH
T ss_pred HHhCC-EEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecC-CC----cceeEEeehh--h-ccHHHHHHHhChHH
Confidence 33344 569999999999999999987542211 11110 01 1122211111 1 133333 34
Q ss_pred HHHHHhhcCCCCCCCcccEEEecC-CCCcccccccccccccccCCCCceEEEEEEEecCCC-CCceeeecCCCCCCC---
Q 023050 147 EKRIADFTFFPLENGEGLQVLHYE-AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVFPNAQGNIS--- 221 (288)
Q Consensus 147 ~~ri~~~~~~p~~~~E~lqv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-eGGeT~Fp~~~~~~s--- 221 (288)
.+.+++++|-++......-+.+-. .|....||.|...-.........+.+|+.++|.|+. +.|.|.|-...-...
T Consensus 114 ~~i~~~llG~~~~l~~s~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~ 193 (310)
T 3emr_A 114 LDIVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSC 193 (310)
T ss_dssp HHHHHHHHTSCEEEEEEEEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEEC
T ss_pred HHHHHHHcCCceEEEeeEEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCcccc
Confidence 445556666432111111111211 356788999964210000011257899999999984 667777743211100
Q ss_pred --C--CCCccc-cc-------c-------cCC-c-CeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc-cEEEEEE
Q 023050 222 --A--VPWWNE-LS-------E-------CGK-T-GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTK 279 (288)
Q Consensus 222 --~--~~~~~~-~~-------~-------c~~-~-~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~ 279 (288)
. ...|.+ +. + ..+ . -+.+.-++|+++||. ..++|++.+..+. .|+++..
T Consensus 194 ~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~---------~~~~H~s~~N~S~~~R~~l~~ 264 (310)
T 3emr_A 194 VGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFE---------SNTMHGSTSNITPYPRNNLFM 264 (310)
T ss_dssp CC-----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEE---------TTCCEEECCCCSSCCCCEEEE
T ss_pred cccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEe---------CCceecCCCCCCCCCeEEEEE
Confidence 0 000110 00 0 000 1 466777899999996 5899999998765 5666655
Q ss_pred eee
Q 023050 280 WIR 282 (288)
Q Consensus 280 W~~ 282 (288)
-+.
T Consensus 265 ~y~ 267 (310)
T 3emr_A 265 VYN 267 (310)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 11
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.44 E-value=0.00069 Score=60.79 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=59.4
Q ss_pred CCcccccccccccccccCCCCceEEEEEEEecCCC-CCceeee-cCCCCCCCCC-----------CC--c----cccccc
Q 023050 172 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISAV-----------PW--W----NELSEC 232 (288)
Q Consensus 172 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~-eGGeT~F-p~~~~~~s~~-----------~~--~----~~~~~c 232 (288)
|+...||.|...-. .....+.+|+.++|.|+. ++|.+.| |.... .... +. + .++.
T Consensus 150 ~~~~~wHqD~~~~~---~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 223 (291)
T 2opw_A 150 GGEVSPHQDASFLY---TEPLGRVLGVWIAVEDATLENGCLWFIPGSHT-SGVSRRMVRAPVGSAPGTSFLGSEPARD-- 223 (291)
T ss_dssp BCCEEEECGGGTSC---EESSSCEEEEEEESSCBCTTTTCEEEETTCSS-SCCSEEEEECC----CCEEEEECCCCCC--
T ss_pred CCCcCCeeCCcccc---cCCCCceEEEEEEcccCCCCCCCEEEECCccC-CCcccccccCCCCCCCcceeeccccCCC--
Confidence 35578999975311 111237899999999985 6677877 43321 1100 00 0 0011
Q ss_pred CCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc-cEEEEEEee
Q 023050 233 GKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWI 281 (288)
Q Consensus 233 ~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W~ 281 (288)
....+.+.-++|+++||. ..++|++.|..+. .|++++.-+
T Consensus 224 ~~~~v~~~~~aGd~~~f~---------~~~~H~s~~N~s~~~R~~~~~~~ 264 (291)
T 2opw_A 224 NSLFVPTPVQRGALVLIH---------GEVVHKSKQNLSDRSRQAYTFHL 264 (291)
T ss_dssp GGGCEEECBCTTCEEEEE---------TTCEEEECCBCSSSCCCEEEEEE
T ss_pred cCCeeecccCCCcEEEEc---------CCceecCCCCCCCCceEEEEEEE
Confidence 123577889999999996 5899999998864 566665443
No 12
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=97.16 E-value=0.0027 Score=58.38 Aligned_cols=183 Identities=13% Similarity=0.098 Sum_probs=93.2
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCcCCC--ceeEeCCCCCccccceeeccceeecCCccHHHH------HHHHHHHhhc
Q 023050 83 EPRAFVYHNFLSKEECEYLINLATPHMRK--STVVDSDTGKSKDSRVRTSSGTFLARGRDKIIR------DIEKRIADFT 154 (288)
Q Consensus 83 ~P~i~vi~nfLs~~EC~~Li~~a~~~~~~--s~v~~~~~g~~~~~~~Rts~~~~l~~~~d~vv~------~i~~ri~~~~ 154 (288)
+. .++++++|+++||+.+.+..+..+.. ..+.....|. ..|... ++.. .++.+. +|.+.+++++
T Consensus 23 ~G-yv~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~~~~g~----~~~~~~--~~~~-~~~~f~~l~~~p~l~~~~~~ll 94 (319)
T 3gja_A 23 DG-YIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGK----ANISNY--DRHL-DIDLLAEHIMRPEIVDRVGSLI 94 (319)
T ss_dssp HS-EEEEEESSCHHHHHHHHHHHHHHHHCCTTCSSCSCSSH----HHHTTT--TGGG-TCHHHHHHHHCHHHHHHHHHHH
T ss_pred CC-EEECcCCCCHHHHHHHHHHHHHHhhcCccccccCCCcc----chhhhh--hhcc-cCHHHHHHHcChHHHHHHHHHc
Confidence 44 46899999999999998888653211 1111111111 122111 1111 123333 3445556666
Q ss_pred CCCCCCCcccEEEecCCCCcccccccccccccc-------cCCCC----ceEEEEEEEecCCC-CCceeeecCCCCCCCC
Q 023050 155 FFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFN-------TKNGG----QRMATVLMYLSDVE-EGGETVFPNAQGNISA 222 (288)
Q Consensus 155 ~~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~-------~~~~~----~R~~T~liYLND~~-eGGeT~Fp~~~~~~s~ 222 (288)
|-++-.....-+.++..++...||.|...-... ....+ .+.+|+.++|.|+. +.|.|.|-...-....
T Consensus 95 G~~~~~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~~~~ 174 (319)
T 3gja_A 95 GRNLLCWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMN 174 (319)
T ss_dssp CSSEEEEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC---CE
T ss_pred CCceEEeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCccCcc
Confidence 643221111123344433347899996431100 00000 13599999999984 5677777332111110
Q ss_pred -----CCCccc----------------------cc------ccCCcCeEEeCCCceEEEEecCCCCCCCCCCCccccccc
Q 023050 223 -----VPWWNE----------------------LS------ECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPV 269 (288)
Q Consensus 223 -----~~~~~~----------------------~~------~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV 269 (288)
...|+. +. ......+.+.-++|++|||. ..++|++.|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~~~H~s~~N 245 (319)
T 3gja_A 175 YDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFW---------SNTMHASLPH 245 (319)
T ss_dssp ECCC------------------------------------------CCBCCBCTTEEEEEE---------TTSCEEECCC
T ss_pred cCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEc---------CCccccCCCC
Confidence 000100 00 00123466778899999996 5899999999
Q ss_pred c--cc-cEEEEEEeee
Q 023050 270 I--KG-NKWSSTKWIR 282 (288)
Q Consensus 270 ~--~G-~K~i~~~W~~ 282 (288)
. ++ .|+++..-+.
T Consensus 246 ~~ts~~~R~a~~~~y~ 261 (319)
T 3gja_A 246 TGSKTDYRMGFAARYV 261 (319)
T ss_dssp CSCTTCCEEEEEEEEE
T ss_pred CCCCCCcEEEEEEEEE
Confidence 8 54 6777665443
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=97.05 E-value=0.007 Score=53.44 Aligned_cols=168 Identities=13% Similarity=0.135 Sum_probs=94.1
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcC--cCCCceeEeCCCCCccccceeeccceeec------------C--CccHHHHHHH
Q 023050 84 PRAFVYHNFLSKEECEYLINLATP--HMRKSTVVDSDTGKSKDSRVRTSSGTFLA------------R--GRDKIIRDIE 147 (288)
Q Consensus 84 P~i~vi~nfLs~~EC~~Li~~a~~--~~~~s~v~~~~~g~~~~~~~Rts~~~~l~------------~--~~d~vv~~i~ 147 (288)
|.+.+++|||+++|.+.|++.... .+...... ..|.......+++ |+. . .-.+.+..|.
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~--~~g~~~~~~R~~~---~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~ 114 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGI--REDITYQQPRLTA---WYGELPYTYSRITMEPNPHWHPVLRTLK 114 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEE--SSSCEEECSSEEE---EEECCCTTSCHHHHCCBSSCCHHHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCcee--cCCcccccCCeeE---EcCCCccccCCcccCCCCCCCHHHHHHH
Confidence 358999999999999999988742 23222211 1122111111111 221 0 1135677788
Q ss_pred HHHHhhcCCCCCCCcccEEEecCCCC-cccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCc
Q 023050 148 KRIADFTFFPLENGEGLQVLHYEAGQ-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWW 226 (288)
Q Consensus 148 ~ri~~~~~~p~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~ 226 (288)
++++++.+.+. +..-+..|..|+ .-.+|.|.... + ..+..++|+-+ |+..+|-..........
T Consensus 115 ~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~-~---~~~~~IaslSL-------G~~~~f~f~~~~~~~~~-- 178 (238)
T 2iuw_A 115 NRIEENTGHTF---NSLLCNLYRNEKDSVDWHSDDEPS-L---GRCPIIASLSF-------GATRTFEMRKKPPPEEN-- 178 (238)
T ss_dssp HHHHHHHSCCC---CEEEEEEECSTTCCEEEECCCCGG-G---CSSCCEEEEEE-------ESCEEEEEEECCC------
T ss_pred HHHHHHhCCCC---CEEEEEEECCCCCceeCCcCChhh-c---CCCCcEEEEEC-------CCCEEEEEeccCCcccc--
Confidence 88888776442 467889999997 99999997431 1 11245666553 44555532110000000
Q ss_pred ccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccc--cccEEEEEE
Q 023050 227 NELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KGNKWSSTK 279 (288)
Q Consensus 227 ~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~ 279 (288)
. ..+....+.|.-..|++|++.. ..-....|++.+.. .|.|..+|-
T Consensus 179 ~--~~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLTf 226 (238)
T 2iuw_A 179 G--DYTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLTF 226 (238)
T ss_dssp ------CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEEE
T ss_pred C--cccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEEe
Confidence 0 0001235789999999999963 11123469888763 567777763
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=96.54 E-value=0.034 Score=48.21 Aligned_cols=108 Identities=16% Similarity=0.141 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccEEEecCCCCcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCC
Q 023050 142 IIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNIS 221 (288)
Q Consensus 142 vv~~i~~ri~~~~~~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s 221 (288)
.+..+.+++....+++...-+..-+..|.+|+.-.+|.|..... -+..++|+-+ |++.+|-......
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~-----~~~pI~svSL-------G~~~~f~f~~~~~- 151 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPD-----LRAPIVSVSL-------GLPAIFQFGGLKR- 151 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSC-----TTSCEEEEEE-------ESCEEEEECCSST-
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccc-----cCCCEEEEEC-------CCCeEEEEecccC-
Confidence 67788888888776543223468889999999999999952211 1244666653 6666665432100
Q ss_pred CCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCccccccccc-------ccEEEEEE
Q 023050 222 AVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK-------GNKWSSTK 279 (288)
Q Consensus 222 ~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~-------G~K~i~~~ 279 (288)
.+....|.-..|+++++.. ..- ...|++.+... +.|+.+|-
T Consensus 152 -----------~~~~~~i~L~~GsllvM~G-----~~r-~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 152 -----------NDPLKRLLLEHGDVVVWGG-----ESR-LFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp -----------TSCCEEEEECTTCEEEECG-----GGT-TCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred -----------CCceEEEECCCCCEEEECc-----hHH-ceEeccCcccCCcCCCCCCCEEEEEe
Confidence 1235789999999999953 111 25799988876 34777764
No 15
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=96.49 E-value=0.035 Score=47.74 Aligned_cols=174 Identities=14% Similarity=0.069 Sum_probs=96.6
Q ss_pred EecCCCEEEEcCCCCHHHHHHHHHHhcC--cC---CCceeEeCCCCCccc------------cceeeccceeecCCccHH
Q 023050 80 ISWEPRAFVYHNFLSKEECEYLINLATP--HM---RKSTVVDSDTGKSKD------------SRVRTSSGTFLARGRDKI 142 (288)
Q Consensus 80 ls~~P~i~vi~nfLs~~EC~~Li~~a~~--~~---~~s~v~~~~~g~~~~------------~~~Rts~~~~l~~~~d~v 142 (288)
|.-+...+.+++||+++|++.|.+.... .+ +...+.- .|+... ..++-|........-.+.
T Consensus 6 ~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~--~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~ 83 (204)
T 3s57_A 6 IRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV--FGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPV 83 (204)
T ss_dssp EEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE--TTEEEECSSEEEEEECTTCCEEETTEEECCEECCHH
T ss_pred eeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE--CCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHH
Confidence 3446667889999999999999887643 23 2111210 122111 122222222111111468
Q ss_pred HHHHHHHHHhhcCCCCCCCcccEEEecCCCC-cccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCC
Q 023050 143 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQ-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNIS 221 (288)
Q Consensus 143 v~~i~~ri~~~~~~p~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s 221 (288)
+..|.++++++++.+. ...-+..|..|+ .-.+|.|.... -..+.-++|+-+ |+...|-.......
T Consensus 84 L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~----~~~~~~IasvSL-------G~~~~f~~~~~~~~ 149 (204)
T 3s57_A 84 LERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDERE----LAPGSPIASVSF-------GASRDFVFRHKDSR 149 (204)
T ss_dssp HHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTT----BCTTCCEEEEEE-------ESCEEEEEEEGGGC
T ss_pred HHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhh----ccCCCcEEEEEC-------CCceEEEEEEcCCC
Confidence 8889999988877543 357789999999 89999997421 012334555443 44444432110000
Q ss_pred CCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccc--cccEEEEEE
Q 023050 222 AVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KGNKWSSTK 279 (288)
Q Consensus 222 ~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~ 279 (288)
.. . .........+.-..|+++++.. ..-....|++.+.. .|.|.++|-
T Consensus 150 ~~----~-~~~~~~~~~~~L~~GsllvM~g-----~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 150 GK----S-PSRRVAVVRLPLAHGSLLMMNH-----PTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp SS----S-CSCCCCCEEEEECTTEEEEEET-----THHHHEEEEECCCTTCCSCEEEEEE
T ss_pred cc----c-cccCCceEEEECCCCCEEEECc-----hhhheeEeeccccCCCCCCEEEEEe
Confidence 00 0 0001135789999999999963 11122457776664 267887764
No 16
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=95.99 E-value=0.007 Score=55.36 Aligned_cols=128 Identities=9% Similarity=-0.019 Sum_probs=66.9
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCcCCCceeEeCC-C-CCccccceeecccee---ecCCccHHHHHHHHHHHhhcCCC
Q 023050 83 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSD-T-GKSKDSRVRTSSGTF---LARGRDKIIRDIEKRIADFTFFP 157 (288)
Q Consensus 83 ~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s~v~~~~-~-g~~~~~~~Rts~~~~---l~~~~d~vv~~i~~ri~~~~~~p 157 (288)
+.+ .++.|++|++|++.|++..+.....+.+.... + -......+|+....+ ....-+.+..++...+.+++|-.
T Consensus 40 eGY-Lvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h~~s~l~~rll~vl~~LlG~e 118 (344)
T 3nnf_A 40 KGY-CQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKN 118 (344)
T ss_dssp HSE-EEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHHHHHHHHGGGHHHHHHHHTSC
T ss_pred Cce-EEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 444 58999999999999999997643322221000 0 000122344331111 11000123344444455555543
Q ss_pred CCCCcccEEEecCCCC-cccccccccccccccCCCCceEEEEEEEecCCC--CCceeee-c
Q 023050 158 LENGEGLQVLHYEAGQ-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE--EGGETVF-P 214 (288)
Q Consensus 158 ~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~--eGGeT~F-p 214 (288)
.-. -.-+...+.+|+ .|.||.|...-. ......+-+|+-+=|.+.. ++|...+ |
T Consensus 119 l~i-~qs~~fe~kPG~KGFpWH~D~~~F~--~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP 176 (344)
T 3nnf_A 119 LMI-MHNALFSVEPNHKGLPWHVGVGSFS--FTKTEDFGASIWIPLDKITKEHRGGMQYVS 176 (344)
T ss_dssp EEE-EEEEEEEECBTCCBSCSBCTTTTTT--TBCTTSCEEEEEEESSCBCTTTBCSEEEEC
T ss_pred eee-eecceEeeCCCCCCCCceecccccc--cccCCCCeEEEEEECCCCCccCCCceEEec
Confidence 211 134446677765 599999932101 1223458889888898765 3565555 5
No 17
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=95.61 E-value=0.047 Score=50.84 Aligned_cols=138 Identities=14% Similarity=0.176 Sum_probs=73.5
Q ss_pred ecCCCEEEEcCCCCHHHHHHHHHHhcCcCCCceeEeCCCCCccc---------cceeecccee-----ecCCccHHHHHH
Q 023050 81 SWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKD---------SRVRTSSGTF-----LARGRDKIIRDI 146 (288)
Q Consensus 81 s~~P~i~vi~nfLs~~EC~~Li~~a~~~~~~s~v~~~~~g~~~~---------~~~Rts~~~~-----l~~~~d~vv~~i 146 (288)
++-|.+.+++||||++|.+.|++...-.-.+..+. |.... ..++-+.... +...-.+.+..|
T Consensus 108 ~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~----~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~l 183 (345)
T 3tht_A 108 ALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQN----SQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESF 183 (345)
T ss_dssp SCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHHHH
T ss_pred cCCCceEEEcCcCCHHHHHHHHHhcccCCcccccc----CcccccCceEEEECCcccccccccccCCCCCcCcCHHHHHH
Confidence 45678999999999999999887664211011000 11111 1111111111 111113356777
Q ss_pred HHHHHhhcCCCCCCCcccEEEecCCCCcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCc
Q 023050 147 EKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWW 226 (288)
Q Consensus 147 ~~ri~~~~~~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~ 226 (288)
.+|+.+....+ .......+..|.+|+.-.||.|.... -+..++|+-+ |+..+|-....
T Consensus 184 ~~r~~~~~~~~-~~~n~~lvN~Y~~G~~I~~H~D~~~~------~~~~I~slSL-------G~~~~f~f~~~-------- 241 (345)
T 3tht_A 184 LEKWLRKGYIK-HKPDQMTINQYEPGQGIPAHIDTHSA------FEDEIVSLSL-------GSEIVMDFKHP-------- 241 (345)
T ss_dssp HHHHHHHTSCS-SCCSEEEEEEECTTCCEEEECCCTTT------BCSCEEEEEE-------SSCEEEEEECT--------
T ss_pred HHHHHhcccCC-CCCCEEEEEEecCCCCEeeccCCchh------cCCeEEEEEC-------CCceeEEEccC--------
Confidence 78876421112 22346788999999999999997532 1245555542 56666643211
Q ss_pred ccccccCCcCeEEeCCCceEEEEe
Q 023050 227 NELSECGKTGLSIKPKMGDALLFW 250 (288)
Q Consensus 227 ~~~~~c~~~~l~V~Pk~G~alvF~ 250 (288)
+...+.|.-..|+++++.
T Consensus 242 ------~~~~~~l~L~~gsLlvM~ 259 (345)
T 3tht_A 242 ------DGIAVPVMLPRRSLLVMT 259 (345)
T ss_dssp ------TSCEEEEEECTTEEEEEC
T ss_pred ------CCceEEEEcCCCcEEEEC
Confidence 012467888889999885
No 18
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=88.66 E-value=2.6 Score=38.35 Aligned_cols=88 Identities=15% Similarity=0.165 Sum_probs=58.3
Q ss_pred ccEEEecCCC------CcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcC
Q 023050 163 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. ....+|.|+. .+|+|+ .|...||==+..+ ...
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~~v~GLQV~~~------------------g~W 203 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG------------GIILLF--QDDKVSGLQLLKD------------------GQW 203 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS------------SEEEEE--ESSSCCCEEEEET------------------TEE
T ss_pred eeEEEecCCCcccccccccccccCCC------------ceEEEE--ecCCCCeeeEeeC------------------CeE
Confidence 4789999863 2357888864 578774 4544566555432 147
Q ss_pred eEEeCCCceEEEEec----CCCCCCCCCCCcccccccccccEEEEEEeeee
Q 023050 237 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 283 (288)
Q Consensus 237 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|..||--- ...|| .-..+.|++.....+.|+++.-+++-
T Consensus 204 i~V~p~pgalvVNiGD~l~~~SnG-~~kS~~HRVv~~~~~~R~Sia~F~~p 253 (319)
T 1w9y_A 204 IDVPPMRHSIVVNLGDQLEVITNG-KYKSVMHRVIAQKDGARMSLASFYNP 253 (319)
T ss_dssp EECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSSCCEEEEEEEEC
T ss_pred EEcccCCCcEEEEhHHHHHHHhCC-eeecccceecCCCCCCceEEEEEecC
Confidence 899999999887531 11122 23578999987666789998877654
No 19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=82.17 E-value=8.3 Score=35.43 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=57.4
Q ss_pred ccEEEecCCCC------cccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcC
Q 023050 163 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 236 (288)
Q Consensus 163 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+.. ...+|.|+. .+|+|+. |. .||==++.+ ...
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~~------------------g~W 257 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS------------ALTFILH--NM-VPGLQLFYE------------------GKW 257 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS------------SEEEEEE--CS-CCCEEEEET------------------TEE
T ss_pred eeeeeecCCCCCcccccCcCCccCCC------------eEEEEEE--cC-CCCeEEecC------------------CcE
Confidence 57889998532 356788763 4787755 43 456445432 147
Q ss_pred eEEeCCCceEEEEec----CCCCCCCCCCCcccccccccccEEEEEEeeeec
Q 023050 237 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 284 (288)
Q Consensus 237 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|+|..|..||--- ...|| .-..+.|++.......|+++.-+++-+
T Consensus 258 i~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 258 VTAKCVPDSIVMHIGDTLEILSNG-KYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp EECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred EECcCCCCeEEEEeccHHHHhcCC-EeeccCceecCCCCCCEEEEEEeecCC
Confidence 899999999888631 11122 235789999866566899998877643
No 20
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=80.67 E-value=7.3 Score=35.09 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=63.2
Q ss_pred HHHHHHHhhcCC----CCC----CCcccEEEecCCC---------C-cccccccccccccccCCCCceEEEEEEEecCCC
Q 023050 145 DIEKRIADFTFF----PLE----NGEGLQVLHYEAG---------Q-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE 206 (288)
Q Consensus 145 ~i~~ri~~~~~~----p~~----~~E~lqv~rY~~G---------~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~ 206 (288)
.|.+.++..+|+ +.+ ....+++.+|.+. + ...+|.|+. .+|+|+. |..
T Consensus 132 ~ll~~la~~Lgl~~~~~~~~f~~~~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~ 197 (311)
T 1dcs_A 132 AVAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS------------MVTLIQQ--TPC 197 (311)
T ss_dssp HHHHHHHHHTTCCCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECS------------SEEEEEE--ECC
T ss_pred HHHHHHHHHcCCCCcCcHhHHhhcchhhheecCCCCCcccccCccccccccccCCC------------eEEEEec--CCC
Confidence 334444445677 421 1346889999852 1 156888864 5787755 423
Q ss_pred CCc--eeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEec----CCCCCCCCCCCcccccccc-----cccEE
Q 023050 207 EGG--ETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVI-----KGNKW 275 (288)
Q Consensus 207 eGG--eT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~-----~G~K~ 275 (288)
.|| .+.... + ...+.|+|..|..||--- ..-|| .-..+.|++.... ...|+
T Consensus 198 v~G~~~LqV~~-~----------------g~W~~V~p~pg~lvVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~~~~~~R~ 259 (311)
T 1dcs_A 198 ANGFVSLQAEV-G----------------GAFTDLPYRPDAVLVFCGAIATLVTGG-QVKAPRHHVAAPRRDQIAGSSRT 259 (311)
T ss_dssp TTCCCCEEEEE-T----------------TEEEECCCCTTCEEEEECHHHHHHTTS-CSCCCCEEECCC----CTTCCEE
T ss_pred CCCceeEEEEe-C----------------CEEEeCcCCCCeEEEEHHHHHHHHhCC-cccCCCceEeCCCcccCCCCCeE
Confidence 355 244332 1 147899999999888531 11223 2357899998665 45799
Q ss_pred EEEEeeee
Q 023050 276 SSTKWIRV 283 (288)
Q Consensus 276 i~~~W~~~ 283 (288)
++.-+++-
T Consensus 260 Si~~F~~p 267 (311)
T 1dcs_A 260 SSVFFLRP 267 (311)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 98877654
No 21
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=79.64 E-value=3.9 Score=36.17 Aligned_cols=71 Identities=23% Similarity=0.302 Sum_probs=48.1
Q ss_pred ceEEEEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeEEeC-CCceEEEEecCCCCCCCCCCCccccccccc
Q 023050 193 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKP-KMGDALLFWSMKPDASLDPSSLHGGCPVIK 271 (288)
Q Consensus 193 ~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~P-k~G~alvF~n~~~~g~~D~~~lH~g~PV~~ 271 (288)
.-++.+++--+++. ||+|.....+. +....++- +.|+++++- |.+.+|.+.||..
T Consensus 171 d~v~v~lv~R~Ni~-GGet~I~~~~~---------------~~~~~~~l~~p~d~llv~--------D~~~~H~vTpI~~ 226 (254)
T 3pl0_A 171 DFVAVVFIGRQGVR-GGETRVFDAAG---------------PQGVRFTLEQPWTVLLLD--------DQQVIHESTPLLP 226 (254)
T ss_dssp SEEEEEEEEEESEE-ECCEEEEETTS---------------SEEEEECCCSTTCEEEEE--------TTTEEEEECCEEE
T ss_pred CEEEEEEecCCccc-cceEEEEcCCC---------------CccceeEecCCCcEEEEe--------CCcccCCCCcccc
Confidence 46677777776654 89998876431 12333333 789998885 6789999999974
Q ss_pred ---------ccEEEEEEeeeecccc
Q 023050 272 ---------GNKWSSTKWIRVNEYK 287 (288)
Q Consensus 272 ---------G~K~i~~~W~~~~~~~ 287 (288)
|.|-++..=++...|.
T Consensus 227 ~~~~~~~~~g~RDvlVvtf~~~~~~ 251 (254)
T 3pl0_A 227 LDPADPAVPAHRDTLVLTYRSGGFQ 251 (254)
T ss_dssp SCTTCTTSCCEEEEEEEEEESSSCS
T ss_pred CCCCCCCCceEEEEEEEEecCCccc
Confidence 5677777666665553
No 22
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=70.70 E-value=21 Score=31.97 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=62.5
Q ss_pred HHHHHHHHhhcCCCCC--------CCcccEEEecCCCC------cccccccccccccccCCCCceEEEEEEEecCCCCCc
Q 023050 144 RDIEKRIADFTFFPLE--------NGEGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGG 209 (288)
Q Consensus 144 ~~i~~ri~~~~~~p~~--------~~E~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGG 209 (288)
..|.+.++..+|++.. ....+++.+|.+.. ...+|.|+. .+|+|+ .|. .||
T Consensus 143 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~-v~G 207 (312)
T 3oox_A 143 GKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN------------TITLLL--GAE-EGG 207 (312)
T ss_dssp HHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS------------SEEEEE--CCT-TSC
T ss_pred HHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc------------eEEEEe--EcC-cCc
Confidence 3344444555677642 12358899998632 345788863 477774 443 355
Q ss_pred eeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEec----CCCCCCCCCCCcccccccc----cccEEEEEEee
Q 023050 210 ETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVI----KGNKWSSTKWI 281 (288)
Q Consensus 210 eT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~W~ 281 (288)
==+.... ...+.|+|..|.+||--- ..-|| .-..+.|++.... ...||++.-++
T Consensus 208 LqV~~~~-----------------g~W~~V~p~pg~~vVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~~~~~R~Sia~F~ 269 (312)
T 3oox_A 208 LEVLDRD-----------------GQWLPINPPPGCLVINIGDMLERLTNN-VLPSTVHRVVNPPPERRGVPRYSTPFFL 269 (312)
T ss_dssp EEEECTT-----------------SCEEECCCCSSCEEEEECHHHHHHTTT-SSCCCCEEECCCCGGGTTSCEEECCEEE
T ss_pred eEEECCC-----------------CcEEECCCCCCeEEEEhHHHHHHHhCC-eecCCCceEeCCCccCCCCCEEEEEEEe
Confidence 4343321 147899999999888531 11222 2357899986432 23599887776
Q ss_pred ee
Q 023050 282 RV 283 (288)
Q Consensus 282 ~~ 283 (288)
+-
T Consensus 270 ~P 271 (312)
T 3oox_A 270 HF 271 (312)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 23
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=64.82 E-value=23 Score=31.95 Aligned_cols=106 Identities=14% Similarity=0.009 Sum_probs=62.7
Q ss_pred HHHHHHHHHhhcCCCCC--------CCcccE--EEecC------C----------CCcccccccccccccccCCCCceEE
Q 023050 143 IRDIEKRIADFTFFPLE--------NGEGLQ--VLHYE------A----------GQKYEPHFDYFMDEFNTKNGGQRMA 196 (288)
Q Consensus 143 v~~i~~ri~~~~~~p~~--------~~E~lq--v~rY~------~----------G~~y~~H~D~~~~~~~~~~~~~R~~ 196 (288)
..+|.+.|+..+|++.+ ....++ +.+|. + .....+|.|+. .+
T Consensus 153 ~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g------------~l 220 (331)
T 1odm_A 153 SSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS------------LI 220 (331)
T ss_dssp HHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS------------SE
T ss_pred HHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCC------------eE
Confidence 34444555555677632 123578 99998 4 11246777753 57
Q ss_pred EEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEec----CCCCCCCCCCCcccccccccc
Q 023050 197 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 197 T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G 272 (288)
|+|+. |. .||==+.... . .+.|+|..|..||--- ..-|| .-..+.|++.. ...
T Consensus 221 TlL~q--d~-v~GLQV~~~~-----------------g-Wi~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~-~~~ 277 (331)
T 1odm_A 221 TVLYQ--SN-VQNLQVETAA-----------------G-YQDIEADDTGYLINCGSYMAHLTNN-YYKAPIHRVKW-VNA 277 (331)
T ss_dssp EEEEE--CS-SCCEEEEETT-----------------E-EEECCCCTTSEEEEECHHHHHHTTT-SSCCCCEEEEC-CCS
T ss_pred EEEee--CC-CCCEEEEcCC-----------------C-eEECCCCCCeEEEEccHHHHHHhCC-EeeCCCceeCC-CCC
Confidence 77755 42 3554444221 2 6889999999887531 11122 23578999964 255
Q ss_pred cEEEEEEeeee
Q 023050 273 NKWSSTKWIRV 283 (288)
Q Consensus 273 ~K~i~~~W~~~ 283 (288)
+|+++.-+++-
T Consensus 278 ~R~Sia~F~~P 288 (331)
T 1odm_A 278 ERQSLPFFVNL 288 (331)
T ss_dssp CEEEEEEEECC
T ss_pred CEEEEEEEEcC
Confidence 79998877754
No 24
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=49.71 E-value=15 Score=33.42 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=35.4
Q ss_pred CeEEeCCCceEEEEecCCCCCCCCCCCcccccccc---cc-cEEEEEEeeeeccc
Q 023050 236 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI---KG-NKWSSTKWIRVNEY 286 (288)
Q Consensus 236 ~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~---~G-~K~i~~~W~~~~~~ 286 (288)
.+.++=++|+++||.| .+++|+-.+-. .| .||..+.|+....+
T Consensus 296 ~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~d~~ 342 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITRDLH 342 (358)
T ss_dssp CEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEESCGG
T ss_pred ceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEecCcc
Confidence 4778889999999998 58999988864 24 79999999987654
No 25
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=49.19 E-value=14 Score=33.67 Aligned_cols=43 Identities=9% Similarity=0.250 Sum_probs=35.6
Q ss_pred CeEEeCCCceEEEEecCCCCCCCCCCCccccccccc----ccEEEEEEeeeeccc
Q 023050 236 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK----GNKWSSTKWIRVNEY 286 (288)
Q Consensus 236 ~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~----G~K~i~~~W~~~~~~ 286 (288)
.+.++=+.|+++||.| .+++|+-.+... +.||..+.|+....+
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~d~~ 337 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLTDLR 337 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEESCGG
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEccccc
Confidence 4778889999999998 589999888742 479999999987654
No 26
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=48.75 E-value=35 Score=30.02 Aligned_cols=88 Identities=22% Similarity=0.239 Sum_probs=54.1
Q ss_pred ccEEEecCCCC--------cccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCC
Q 023050 163 GLQVLHYEAGQ--------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGK 234 (288)
Q Consensus 163 ~lqv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~ 234 (288)
-+++.+|.+.. ...+|.|+. .+|+|+ .| ..||==+.... .
T Consensus 151 ~lr~~~YP~~~~~~~~~~~g~~~HtD~g------------~lTlL~--qd-~~~GLqV~~~~-----------------g 198 (280)
T 3on7_A 151 LLRILHYPPMTGDEEMGAIRAAAHEDIN------------LITVLP--TA-NEPGLQVKAKD-----------------G 198 (280)
T ss_dssp EEEEEEECCCCTTCCCCSEEEEEECCCS------------SEEEEE--CC-SCCCEEEECTT-----------------S
T ss_pred eEEEEECCCCCCccccCcccccCCCCCC------------eEEEEE--ec-CCCCeEEEcCC-----------------C
Confidence 48899998632 145788863 477774 34 23554444321 1
Q ss_pred cCeEEeCCCceEEEEec----CCCCCCCCCCCcccccccc----cccEEEEEEeeee
Q 023050 235 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVI----KGNKWSSTKWIRV 283 (288)
Q Consensus 235 ~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~W~~~ 283 (288)
..+.|+|..|..||--- ...|| .-..+.|++.... ...||++.-+++-
T Consensus 199 ~W~~V~p~pg~~vVNiGD~l~~~Tng-~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P 254 (280)
T 3on7_A 199 SWLDVPSDFGNIIINIGDMLQEASDG-YFPSTSHRVINPEGTDKTKSRISLPLFLHP 254 (280)
T ss_dssp CEEECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEEECCTTCCTTSCEEECCEEECC
T ss_pred CEEECcCCCCEEEEEcChHHHHHhCC-cccCCCceEeCCCCCCCCCCeEEEEEEEcC
Confidence 47899999999888631 11222 2357899986542 3479988777653
No 27
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=45.30 E-value=21 Score=30.92 Aligned_cols=42 Identities=10% Similarity=-0.153 Sum_probs=34.6
Q ss_pred CcCeEEeCCCceEEEEecCCCCCCCCCCCccccccccc--ccEEEEEEeeee
Q 023050 234 KTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK--GNKWSSTKWIRV 283 (288)
Q Consensus 234 ~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~--G~K~i~~~W~~~ 283 (288)
+..+.++=++|++++|.| .+++|+..+-.. +.|+..+.|+..
T Consensus 229 ~~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~g 272 (273)
T 1nx8_A 229 RYYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTAD 272 (273)
T ss_dssp TTEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEEC
T ss_pred ceEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeeccc
Confidence 446888999999999998 589999998764 478888888753
No 28
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=43.58 E-value=44 Score=24.46 Aligned_cols=48 Identities=13% Similarity=0.236 Sum_probs=33.0
Q ss_pred EEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc
Q 023050 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 199 liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.-++|..+|+...|.... ..+.|.-..|....|.| ...|.|+|+..|
T Consensus 5 v~~~~~l~~g~~~~~~~~g-----------------~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g 52 (106)
T 3dqy_A 5 ILRQGDLPPGEMQRYEGGP-----------------EPVMVCNVDGEFFAVQD---------TCTHGDWALSDG 52 (106)
T ss_dssp EEEGGGSCTTCEEEECCSS-----------------SCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEHHHCCCCCEEEEEECC-----------------EEEEEEEECCEEEEEeC---------cCCCCCCCCcCc
Confidence 4456777777777765321 24455447788888876 688999999876
No 29
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=43.21 E-value=25 Score=26.66 Aligned_cols=26 Identities=27% Similarity=0.644 Sum_probs=21.9
Q ss_pred EeCCCceEEEEecCCCCCCCCCCCcccccccccccEEEEEEeeeecc
Q 023050 239 IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNE 285 (288)
Q Consensus 239 V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~ 285 (288)
.+|++|+.++| .|..|+.+.|-+.+.
T Consensus 62 YrP~r~D~Vv~---------------------~Gk~y~Vtr~~~~ng 87 (102)
T 2pp6_A 62 VIPRRGDRVVL---------------------RGSEFTVTRIRRFNG 87 (102)
T ss_dssp CCCCTTCEEEE---------------------TTEEEEEEEEEEETT
T ss_pred cccCCCCEEEE---------------------cCcEEEEEEEEEECC
Confidence 58999999999 588999999877653
No 30
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=38.70 E-value=31 Score=29.94 Aligned_cols=41 Identities=7% Similarity=-0.072 Sum_probs=34.4
Q ss_pred CeEEeCCCceEEEEecCCCCCCCCCCCcccccccc-cccEEEEEEeeeec
Q 023050 236 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI-KGNKWSSTKWIRVN 284 (288)
Q Consensus 236 ~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~W~~~~ 284 (288)
.+.++=+.|++++|.| .+++|+..+-. .+.|+..+.|+...
T Consensus 235 ~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp EEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred EEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 5778889999999998 58999999875 45799999998763
No 31
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=35.47 E-value=21 Score=33.07 Aligned_cols=45 Identities=16% Similarity=0.161 Sum_probs=37.1
Q ss_pred CcCeEEeCCCceEEEEecCCCCCCCCCCCccccccccc--c-cEEEEEEeeeeccc
Q 023050 234 KTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK--G-NKWSSTKWIRVNEY 286 (288)
Q Consensus 234 ~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~--G-~K~i~~~W~~~~~~ 286 (288)
+..+.++=+.|++++|.| .+++|+..+-.. | .|+....|+...++
T Consensus 326 ~~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~d~~ 373 (388)
T 3o2g_A 326 ESKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADWDVV 373 (388)
T ss_dssp TTCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECHHHH
T ss_pred hhEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcchHH
Confidence 345889999999999998 689999988763 4 79999999976654
No 32
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=32.75 E-value=36 Score=30.31 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=34.9
Q ss_pred cCeEEeCCCceEEEEecCCCCCCCCCCCccccccccc---c-cEEEEEEeeeec
Q 023050 235 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK---G-NKWSSTKWIRVN 284 (288)
Q Consensus 235 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~---G-~K~i~~~W~~~~ 284 (288)
..+.++=++|++++|.| .+++|+-.+... | .||....|+...
T Consensus 258 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~d 303 (324)
T 1ds1_A 258 VTEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRTD 303 (324)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEECS
T ss_pred ccEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEecC
Confidence 46889999999999998 589999887653 2 799999998754
No 33
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=30.87 E-value=47 Score=25.42 Aligned_cols=73 Identities=22% Similarity=0.180 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCc-CCCceeEeCCCCCccccceeeccceeecCC---------ccHHHHHHHHHHHhhcCCCCCCCcccEE
Q 023050 97 ECEYLINLATPH-MRKSTVVDSDTGKSKDSRVRTSSGTFLARG---------RDKIIRDIEKRIADFTFFPLENGEGLQV 166 (288)
Q Consensus 97 EC~~Li~~a~~~-~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~---------~d~vv~~i~~ri~~~~~~p~~~~E~lqv 166 (288)
-.+.|++.++.. ..-+++..+..|.......++.....+..+ ..+-++++.+.+.++..-..-..|+.++
T Consensus 31 L~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~Vd~~eki~~~l~~l~~~v~~Glvt~e~V~V 110 (114)
T 1o51_A 31 LFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEEERINLFLKEIDNIDFDGLVFTADVNV 110 (114)
T ss_dssp HHHHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEEECHHHHHHHHHHHHTCCCCSEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEEcCHHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 466777777654 556788777666554444555443333321 2456677777777776532223467777
Q ss_pred Eec
Q 023050 167 LHY 169 (288)
Q Consensus 167 ~rY 169 (288)
.+|
T Consensus 111 ~r~ 113 (114)
T 1o51_A 111 VKM 113 (114)
T ss_dssp CC-
T ss_pred Eec
Confidence 776
No 34
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=30.41 E-value=43 Score=28.99 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=25.1
Q ss_pred ccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCC
Q 023050 175 YEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNA 216 (288)
Q Consensus 175 y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~ 216 (288)
-.||.|..... ..-.+++|.-+.-..+||+|.|-+.
T Consensus 96 ~~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d~ 131 (283)
T 1otj_A 96 DNWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTSG 131 (283)
T ss_dssp CSCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEEH
T ss_pred CCcEeeccCcc------CCCceEEEEEEecCCCCCcceeeeH
Confidence 35999986531 2345667767777788999999653
No 35
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=29.71 E-value=89 Score=22.91 Aligned_cols=49 Identities=14% Similarity=0.151 Sum_probs=31.3
Q ss_pred EEEecCCCCCceeeecC-CCCCCCCCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc
Q 023050 199 LMYLSDVEEGGETVFPN-AQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 199 liYLND~~eGGeT~Fp~-~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.-++|..+|+...|.. .. +.-+-++-+.|....|.| ...|.|+|+..|
T Consensus 5 v~~~~~l~~g~~~~~~~~~g----------------~~v~v~r~~~g~~~A~~~---------~CpH~g~~L~~g 54 (111)
T 1vm9_A 5 ICSLDDIWVGEMETFETSDG----------------TEVLIVNSEEHGVKAYQA---------MCPHQEILLSEG 54 (111)
T ss_dssp EEEGGGSCTTCEEEEECTTC----------------CEEEEEEETTTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEHHHCCCCCeEEEEEcCC----------------CEEEEEEeCCCeEEEEeC---------cCCCCCcCCCCc
Confidence 34566776766656543 21 122345556788888875 788999998766
No 36
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=29.62 E-value=39 Score=29.62 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=25.0
Q ss_pred CcccccccccccccccCCCCceEEEEEEEecCCCCCceeeec
Q 023050 173 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFP 214 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp 214 (288)
+...||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 92 ~~~~wH~D~sy~~------~pp~~~~l~~~~~p~~GG~T~~~ 127 (277)
T 3pvj_A 92 DNAVWHTDVTFLP------TPALGAVLSAKQLPAYGGDTLWA 127 (277)
T ss_dssp GGSSCBCTTTTSS------SCCCEEEEEEEECCSSCCCEEEE
T ss_pred cCCCceeeCCCcC------CCCceEEEEeeccCCCCCCcEee
Confidence 4567999986532 12346666666777889999985
No 37
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=29.13 E-value=44 Score=29.33 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=26.9
Q ss_pred eEEeCCCceEEEEecCCCCCCCCCCCccccccccc-ccEEEEEEeeee
Q 023050 237 LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSSTKWIRV 283 (288)
Q Consensus 237 l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~W~~~ 283 (288)
+.++=++|++++|.| .+++|+..+-.. +.|+.-+.|+..
T Consensus 245 ~~~~w~~GDvvi~DN--------r~~lH~r~~f~~~~~R~l~R~~i~g 284 (301)
T 1oih_A 245 VRWRWEAGDVAIWDN--------RATQHYAVDDYGTQPRIVRRVTLAG 284 (301)
T ss_dssp EEECCCTTCEEEEET--------TSEEEEECCCCTTSCCEEEEEEECC
T ss_pred EEEEEcCCCEEEEEc--------cceeecccCCCCCCceEEEEEEEeC
Confidence 455566777777776 478888887653 367777777754
No 38
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=28.22 E-value=1.3e+02 Score=21.82 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=32.3
Q ss_pred EEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeE-EeCCCceEEEEecCCCCCCCCCCCcccccccccc
Q 023050 197 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLS-IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 197 T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~-V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
..+.-++|..+|+...|.... +..+. ++- .|....|.| ...|.|+|+..|
T Consensus 5 ~~v~~~~~l~~g~~~~~~~~g----------------~~~v~v~r~-~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 5 LRLCQVASVKDGEPVAVYQEK----------------MPALAVYNV-DGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEGGGCBTTBCEEECCTT----------------SSCEEEEEE-TTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEEEHhHcCCCCeEEEEECC----------------eeEEEEEEE-CCEEEEEeC---------cCCCCCCCCCCC
Confidence 345567787777766665421 12133 343 788888865 788999999766
No 39
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=27.83 E-value=95 Score=22.36 Aligned_cols=48 Identities=21% Similarity=0.137 Sum_probs=30.0
Q ss_pred EEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc
Q 023050 199 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 199 liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.-++|..+|+...|.... +.-+-++ ..|....|.| ...|.|+|+..|
T Consensus 7 v~~~~~l~~g~~~~~~~~g----------------~~i~v~r-~~g~~~A~~~---------~CpH~g~~L~~g 54 (103)
T 2qpz_A 7 AVALSDILEGDVLGVTVEG----------------KELALYE-VEGEIYATDN---------LCTHGSARMSDG 54 (103)
T ss_dssp EEETTSCCTTCEEEEEETT----------------EEEEEEE-ETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEHHHcCCCCEEEEEECC----------------EEEEEEE-ECCEEEEECC---------cCCCCCCCCCCC
Confidence 4456677666655554321 1123345 6788777765 788999998766
No 40
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=25.63 E-value=78 Score=23.87 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=33.5
Q ss_pred EEEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc
Q 023050 196 ATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 196 ~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+..+.-++|..+|+...|.... ..+.|.-..|....|.| ...|.|+|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g-----------------~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDG-----------------DEVMVVRDGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETT-----------------EEEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECC-----------------EEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 3455667888777777665421 12333225788878865 788999999876
No 41
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=25.47 E-value=24 Score=33.82 Aligned_cols=77 Identities=23% Similarity=0.362 Sum_probs=48.8
Q ss_pred CceEEEEEEEecCC--CCCceeeecCCCC--------CC-----C-----CC--------CCcccccccCCcCeEEeC--
Q 023050 192 GQRMATVLMYLSDV--EEGGETVFPNAQG--------NI-----S-----AV--------PWWNELSECGKTGLSIKP-- 241 (288)
Q Consensus 192 ~~R~~T~liYLND~--~eGGeT~Fp~~~~--------~~-----s-----~~--------~~~~~~~~c~~~~l~V~P-- 241 (288)
..|.+-=.+=|+|. .+||-.+.| ... .+ + .. +.|..+.+ ..+...|
T Consensus 296 ~FR~fQGwlaLS~~gP~eGtL~v~P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~---~~mv~iP~v 371 (461)
T 2dbn_A 296 VFRTFQGWTALSDMLPGQGLLHVVP-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLI---EALTSIPKL 371 (461)
T ss_dssp SCCSEEEEEESSCBCTTSSCEEECS-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH---TTCEECCCB
T ss_pred ccceeeeehhccCCCCCCCcEEEee-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCccc---CceeeCCCC
Confidence 45666677778876 478888888 421 00 0 01 12322221 2334555
Q ss_pred CCceEEEEecCCCCCCCCCCCcccccccccccEEEEEEee
Q 023050 242 KMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWI 281 (288)
Q Consensus 242 k~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~ 281 (288)
+.|+.|+|. .++.|++.|+..|+.+....++
T Consensus 372 ePGD~V~WH---------~D~iH~V~~~h~g~~~s~V~YI 402 (461)
T 2dbn_A 372 EAGDSVWWH---------CDVIHSVAPVENQQGWGNVMYI 402 (461)
T ss_dssp CTTCEEEEE---------TTCCEEECCBSSCCSCCCEEEC
T ss_pred CCCCEEEEc---------CCCccccccCCCCCcceeEEEe
Confidence 689999996 5899999999999887766554
No 42
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=25.02 E-value=1.9e+02 Score=21.77 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=34.2
Q ss_pred eEEEEEEEecCCCCCceeeecCCCCCCCCCCCcccccccCCcCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc
Q 023050 194 RMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 272 (288)
Q Consensus 194 R~~T~liYLND~~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.+.-+.-++|..+|+...+...+. +.-+-++...|..-.+.| ...|.+.|+.+|
T Consensus 8 ~~W~~Vc~~~dL~~g~~~~~~~~~G---------------~~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~~ 62 (119)
T 4aiv_A 8 QVWTTACAYDHLIPGRGVGVLLDDG---------------SQVALFRLDDGSVHAVGN---------VDPFSGAAVMSR 62 (119)
T ss_dssp EEEEEEEEGGGSCTTCCEEEECTTS---------------CEEEEEECTTSCEEEEES---------BCTTTCCBCGGG
T ss_pred cceeEeeEHHHcCCCCceEEEEcCC---------------cEEEEEEcCCCeEEEEEC---------CCCCCCCccccC
Confidence 4577777888887776554443211 011234555677666654 788999998765
No 43
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=24.51 E-value=56 Score=29.02 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=24.3
Q ss_pred CcccccccccccccccCCCCceEEEEEEEecCCCCCceeeec
Q 023050 173 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFP 214 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp 214 (288)
....||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 98 ~~~~wH~D~s~~~------~pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAA------NYPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCcc------CCCceeEEEEeecCCCCCCCeeE
Confidence 4567999987532 12335666666667889999985
No 44
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=24.02 E-value=76 Score=27.88 Aligned_cols=41 Identities=12% Similarity=0.070 Sum_probs=32.4
Q ss_pred cCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccc-cEEEEEEeeee
Q 023050 235 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIRV 283 (288)
Q Consensus 235 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W~~~ 283 (288)
..+..+=+.|++++|.| .+++|...+-..+ .|+.-+.|+..
T Consensus 240 ~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i~g 281 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHIHA 281 (293)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEEcC
Confidence 45777888999999998 6899999876543 57888888764
No 45
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=22.60 E-value=40 Score=30.02 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=28.1
Q ss_pred cCeEEeCCCceEEEEecCCCCCCCCCCCcccccccccccEEEEEE
Q 023050 235 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTK 279 (288)
Q Consensus 235 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 279 (288)
..+.++=++|++++|.| .+++|+..|- .|.+.++..
T Consensus 292 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l~r 327 (330)
T 2q4a_A 292 ECVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVLAS 327 (330)
T ss_dssp HCBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEEEE
T ss_pred hEeecCCCCCCEEEEec--------ccccccCCCC-CCCceEEEe
Confidence 35678888999999998 5899999994 676555543
No 46
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=21.81 E-value=41 Score=29.95 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=26.1
Q ss_pred CCCcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecCC
Q 023050 171 AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNA 216 (288)
Q Consensus 171 ~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~~ 216 (288)
......||.|..... ..-..++|.-+.-..+||+|.|-+.
T Consensus 113 ~~~~~~~HtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad~ 152 (330)
T 2q4a_A 113 PDQKIPFHHEMAQVR------EFPSKLFFYCEIEPKCGGETPIVLS 152 (330)
T ss_dssp TTSCEEEECTTTTST------TCCSEEEEEEEECCSEECCCCEEEH
T ss_pred CccccccccccCCCC------CCCceEEEECcCCCCcCCceeeecH
Confidence 345667999976531 1223566666666778999998653
No 47
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=21.14 E-value=51 Score=28.34 Aligned_cols=38 Identities=16% Similarity=-0.102 Sum_probs=24.4
Q ss_pred CcccccccccccccccCCCCceEEEEEEEecCCC--CCceeeecCC
Q 023050 173 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE--EGGETVFPNA 216 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~--eGGeT~Fp~~ 216 (288)
+...||.|..... ..-.+++|.-+.-.. +||+|.|-+.
T Consensus 96 ~~~~~HtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLL------SQVDQVFLYAAEIKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTT------CCCCEEEEEEEEEESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCcc------CCCeeEEEEeEeCCCCCCCCcchhhhH
Confidence 3456999976531 122355555566566 8999999754
No 48
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=20.03 E-value=82 Score=27.52 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=20.3
Q ss_pred CcccccccccccccccCCCCceEEEEEEEecCCCCCceeeecC
Q 023050 173 QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 215 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND~~eGGeT~Fp~ 215 (288)
....||.|..... ..-.+++|.-+.-..+||+|.|-+
T Consensus 103 ~~~~wHtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 103 RANSWHTDVTFVE------AYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp CCCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred cCcCCEecccCcC------CCCceEEEEEeecCCCCCcccccc
Confidence 4456777765421 122345555555556677777643
Done!