Query 023053
Match_columns 288
No_of_seqs 216 out of 1160
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023053.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023053hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00052 prolyl 4-hydroxylase; 100.0 1.7E-59 3.7E-64 435.4 23.8 216 71-287 41-256 (310)
2 KOG1591 Prolyl 4-hydroxylase a 100.0 4.7E-52 1E-56 381.5 19.0 262 8-287 10-288 (289)
3 smart00702 P4Hc Prolyl 4-hydro 100.0 6.8E-37 1.5E-41 263.3 18.9 174 84-282 1-178 (178)
4 PRK05467 Fe(II)-dependent oxyg 100.0 1.9E-29 4.1E-34 224.9 15.0 164 86-283 2-178 (226)
5 PHA02813 hypothetical protein; 99.8 5E-18 1.1E-22 157.8 13.1 149 97-279 24-178 (354)
6 PHA02869 C4L/C10L-like gene fa 99.7 9.8E-18 2.1E-22 157.8 12.1 138 109-282 45-190 (418)
7 COG3128 PiuC Uncharacterized i 99.7 3.4E-16 7.3E-21 133.7 11.7 165 84-283 2-181 (229)
8 PF13640 2OG-FeII_Oxy_3: 2OG-F 99.7 2.2E-16 4.8E-21 123.1 7.1 91 164-282 1-100 (100)
9 KOG3710 EGL-Nine (EGLN) protei 99.1 1.8E-09 4E-14 95.3 11.7 168 83-283 52-239 (280)
10 PF03336 Pox_C4_C10: Poxvirus 98.6 3E-07 6.6E-12 85.9 11.8 125 123-278 36-164 (339)
11 PF13661 2OG-FeII_Oxy_4: 2OG-F 98.6 9E-08 2E-12 70.3 5.1 52 161-216 10-65 (70)
12 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.6 7.7E-08 1.7E-12 74.5 4.8 90 162-282 2-97 (98)
13 COG3751 EGL-9 Predicted prolin 98.4 1.8E-06 3.9E-11 78.3 9.4 102 162-285 136-242 (252)
14 PHA02866 Hypothetical protein; 98.1 1.1E-05 2.4E-10 74.1 8.8 131 109-279 32-165 (333)
15 TIGR02408 ectoine_ThpD ectoine 98.1 8.7E-05 1.9E-09 68.5 13.6 182 85-278 29-244 (277)
16 PF05721 PhyH: Phytanoyl-CoA d 97.8 0.0002 4.2E-09 61.1 9.7 168 85-272 5-206 (211)
17 PF13759 2OG-FeII_Oxy_5: Putat 97.7 0.00011 2.3E-09 57.6 6.9 92 166-277 4-98 (101)
18 KOG3844 Predicted component of 97.7 0.00031 6.8E-09 67.0 10.8 171 86-285 38-219 (476)
19 PF09859 Oxygenase-NA: Oxygena 97.7 0.00017 3.7E-09 61.2 7.7 102 163-283 63-172 (173)
20 TIGR01762 chlorin-enz chlorina 97.3 0.011 2.4E-07 55.0 15.9 182 84-281 14-247 (288)
21 TIGR02466 conserved hypothetic 97.3 0.0014 3E-08 57.9 8.9 95 164-278 98-195 (201)
22 PF13532 2OG-FeII_Oxy_2: 2OG-F 97.0 0.0061 1.3E-07 52.5 9.7 154 86-272 2-177 (194)
23 PRK15401 alpha-ketoglutarate-d 96.7 0.066 1.4E-06 47.8 14.4 160 82-272 16-196 (213)
24 PF12851 Tet_JBP: Oxygenase do 96.5 0.013 2.9E-07 50.3 7.8 79 174-282 86-170 (171)
25 PHA02923 hypothetical protein; 94.9 0.19 4.1E-06 46.7 9.1 98 140-279 43-142 (315)
26 COG3826 Uncharacterized protei 93.9 0.29 6.4E-06 42.6 7.5 103 162-283 124-234 (236)
27 KOG3200 Uncharacterized conser 93.3 0.28 6.1E-06 42.4 6.5 97 79-182 7-108 (224)
28 PLN02984 oxidoreductase, 2OG-F 91.6 2.3 5.1E-05 40.5 11.1 87 163-283 201-298 (341)
29 PLN03001 oxidoreductase, 2OG-F 90.7 2.7 5.8E-05 38.5 10.3 108 142-283 88-213 (262)
30 PLN02485 oxidoreductase 89.0 3.8 8.2E-05 38.7 10.2 89 163-283 185-287 (329)
31 PLN02904 oxidoreductase 88.5 5.5 0.00012 38.2 11.0 87 163-283 209-305 (357)
32 PF06822 DUF1235: Protein of u 87.7 4.8 0.0001 37.0 9.4 106 140-284 32-138 (266)
33 TIGR00568 alkb DNA alkylation 87.4 6.6 0.00014 33.7 9.8 86 141-250 74-159 (169)
34 PLN02515 naringenin,2-oxogluta 86.9 6.2 0.00013 37.9 10.3 89 163-283 196-294 (358)
35 PLN00417 oxidoreductase, 2OG-F 86.6 7.2 0.00016 37.2 10.6 88 163-283 204-301 (348)
36 PLN02639 oxidoreductase, 2OG-F 86.6 8.9 0.00019 36.3 11.1 89 162-283 190-288 (337)
37 PLN02254 gibberellin 3-beta-di 86.0 7.4 0.00016 37.4 10.3 88 163-283 211-308 (358)
38 PLN02216 protein SRG1 85.9 7.5 0.00016 37.3 10.3 88 163-283 211-308 (357)
39 PLN02276 gibberellin 20-oxidas 85.6 9.6 0.00021 36.5 10.9 88 162-283 206-303 (361)
40 PLN02947 oxidoreductase 85.2 9.4 0.0002 36.9 10.7 87 163-283 226-322 (374)
41 PLN02750 oxidoreductase, 2OG-F 85.0 10 0.00022 36.1 10.7 90 162-283 193-292 (345)
42 PLN02912 oxidoreductase, 2OG-F 85.0 10 0.00022 36.2 10.7 88 162-283 197-294 (348)
43 PLN02365 2-oxoglutarate-depend 84.9 6.9 0.00015 36.5 9.3 109 143-282 125-248 (300)
44 KOG3959 2-Oxoglutarate- and ir 84.8 1.2 2.6E-05 40.4 3.9 93 83-183 71-175 (306)
45 COG5285 Protein involved in bi 84.4 4.1 8.9E-05 38.0 7.3 99 174-286 132-233 (299)
46 PLN02758 oxidoreductase, 2OG-F 84.0 13 0.00029 35.6 11.1 88 163-282 212-309 (361)
47 PLN02997 flavonol synthase 83.7 6.6 0.00014 37.1 8.7 88 163-284 184-281 (325)
48 PLN02299 1-aminocyclopropane-1 82.9 12 0.00027 35.2 10.2 88 163-283 159-256 (321)
49 PTZ00273 oxidase reductase; Pr 82.4 20 0.00043 33.6 11.4 88 163-284 178-276 (320)
50 PLN02156 gibberellin 2-beta-di 81.5 19 0.00042 34.2 11.0 88 163-283 179-278 (335)
51 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 79.3 4.7 0.0001 35.3 5.6 99 140-271 70-179 (195)
52 KOG0143 Iron/ascorbate family 78.6 22 0.00047 33.7 10.3 88 163-282 177-274 (322)
53 PLN02393 leucoanthocyanidin di 77.8 27 0.00059 33.4 10.9 89 163-284 214-312 (362)
54 COG3491 PcbC Isopenicillin N s 76.7 21 0.00046 33.7 9.3 89 161-282 173-271 (322)
55 PLN02403 aminocyclopropanecarb 76.3 18 0.00038 33.9 8.9 88 163-283 154-252 (303)
56 COG3145 AlkB Alkylated DNA rep 76.0 37 0.00081 29.9 10.2 85 142-250 86-170 (194)
57 PLN02704 flavonol synthase 75.4 12 0.00025 35.5 7.5 88 163-284 200-297 (335)
58 PF14033 DUF4246: Protein of u 73.5 12 0.00026 37.6 7.4 96 176-287 364-482 (501)
59 PHA02985 hypothetical protein; 73.1 34 0.00074 31.5 9.5 105 140-284 39-143 (271)
60 PLN03002 oxidoreductase, 2OG-F 72.4 38 0.00081 32.1 10.2 91 163-283 183-284 (332)
61 PLN03178 leucoanthocyanidin di 70.6 37 0.0008 32.5 9.8 88 163-284 212-309 (360)
62 COG4340 Uncharacterized protei 67.0 15 0.00031 32.4 5.5 43 207-271 159-201 (226)
63 PF02668 TauD: Taurine catabol 66.3 6.8 0.00015 34.5 3.6 38 235-280 219-258 (258)
64 KOG4459 Membrane-associated pr 61.2 1.5 3.3E-05 43.1 -1.7 72 192-284 364-435 (471)
65 PF03579 SHP: Small hydrophobi 60.2 18 0.00039 25.5 3.9 30 11-40 12-41 (64)
66 COG2850 Uncharacterized conser 56.6 20 0.00043 34.6 4.9 49 148-198 105-154 (383)
67 PF13677 MotB_plug: Membrane M 56.0 25 0.00053 24.6 4.2 24 1-24 1-24 (58)
68 cd00250 CAS_like Clavaminic ac 55.2 19 0.0004 32.5 4.4 40 235-282 218-260 (262)
69 KOG4176 Uncharacterized conser 51.3 1.6E+02 0.0034 28.1 10.0 116 141-286 190-307 (323)
70 KOG1971 Lysyl hydroxylase [Pos 39.5 33 0.00073 33.5 3.6 75 192-283 280-356 (415)
71 PF13621 Cupin_8: Cupin-like d 34.2 60 0.0013 28.2 4.2 41 235-284 207-248 (251)
72 cd03528 Rieske_RO_ferredoxin R 33.2 76 0.0016 23.7 4.1 48 199-272 4-51 (98)
73 PF15183 MRAP: Melanocortin-2 32.5 61 0.0013 24.7 3.3 20 17-36 42-61 (90)
74 PRK09553 tauD taurine dioxygen 31.5 31 0.00068 31.6 2.0 31 177-213 96-126 (277)
75 PRK09965 3-phenylpropionate di 30.0 1E+02 0.0022 23.7 4.5 49 197-272 4-52 (106)
76 TIGR02410 carnitine_TMLD trime 29.8 56 0.0012 31.2 3.5 43 235-286 311-353 (362)
77 cd03530 Rieske_NirD_small_Baci 28.6 1E+02 0.0022 23.1 4.1 25 239-272 28-52 (98)
78 TIGR02223 ftsN cell division p 27.8 1.4E+02 0.0031 27.9 5.7 35 71-105 78-126 (298)
79 PRK13726 conjugal transfer pil 27.2 78 0.0017 27.6 3.6 33 10-42 4-36 (188)
80 cd03474 Rieske_T4moC Toluene-4 27.2 1.3E+02 0.0027 23.1 4.5 27 237-272 26-52 (108)
81 PF02532 PsbI: Photosystem II 26.8 1.3E+02 0.0028 19.1 3.5 26 22-47 3-28 (36)
82 TIGR02409 carnitine_bodg gamma 26.1 77 0.0017 30.2 3.7 43 236-286 313-357 (366)
83 PF07423 DUF1510: Protein of u 25.5 65 0.0014 28.9 2.8 17 143-159 152-168 (217)
84 PF15330 SIT: SHP2-interacting 24.9 73 0.0016 25.3 2.8 15 26-40 6-20 (107)
85 PF07219 HemY_N: HemY protein 24.6 1E+02 0.0022 24.0 3.5 12 35-46 36-47 (108)
86 cd00250 CAS_like Clavaminic ac 24.2 88 0.0019 28.0 3.5 38 172-215 93-130 (262)
87 PF15240 Pro-rich: Proline-ric 22.3 57 0.0012 28.4 1.8 12 32-43 3-14 (179)
88 PF10968 DUF2770: Protein of u 22.2 88 0.0019 19.9 2.1 13 25-37 16-28 (36)
89 PF00355 Rieske: Rieske [2Fe-2 22.2 1.4E+02 0.003 22.2 3.8 29 236-273 26-54 (97)
90 cd04337 Rieske_RO_Alpha_Cao Ca 22.2 1.6E+02 0.0035 23.7 4.4 55 193-272 15-69 (129)
91 COG5393 Predicted membrane pro 22.2 1.1E+02 0.0024 24.8 3.3 17 18-34 57-73 (131)
92 cd04338 Rieske_RO_Alpha_Tic55 22.0 1.5E+02 0.0033 23.9 4.3 55 193-273 15-70 (134)
93 cd03542 Rieske_RO_Alpha_HBDO R 21.8 1.1E+02 0.0025 24.4 3.4 27 237-272 27-53 (123)
94 TIGR02409 carnitine_bodg gamma 20.6 95 0.0021 29.6 3.1 37 174-216 186-222 (366)
95 cd03467 Rieske Rieske domain; 20.4 2.2E+02 0.0047 21.1 4.6 28 259-286 39-68 (98)
96 PLN00139 hypothetical protein; 20.3 1.1E+02 0.0024 28.9 3.4 39 171-215 109-147 (320)
97 COG3872 Predicted metal-depend 20.2 1.1E+02 0.0025 28.3 3.3 14 4-17 199-212 (318)
No 1
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=100.00 E-value=1.7e-59 Score=435.42 Aligned_cols=216 Identities=52% Similarity=0.926 Sum_probs=198.4
Q ss_pred ccCceeEEEeecCCCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCCccccceeeecceeecCCccHHHHHHHHHH
Q 023053 71 EKGEQWTEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRI 150 (288)
Q Consensus 71 ~~~~~~ve~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri 150 (288)
.-.+.|+|+||++|+||+|+||||++||++||+++++++.+++++++.+|+...+++|+|+++|++..+++++++|++||
T Consensus 41 ~~~~~kve~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~dpvv~~I~~Ri 120 (310)
T PLN00052 41 PFNASRVKAVSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQDPVVSRIEERI 120 (310)
T ss_pred CcCCceEEEecCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCCCHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999888777777888999999999987799999999999
Q ss_pred HHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCccccccccccccc
Q 023053 151 ADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELS 230 (288)
Q Consensus 151 ~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~ 230 (288)
++++++|.++.|.+||+||++||+|++|+|++.+..+...+++|++|+|+||||+++||||+||.+.. ....+.++.++
T Consensus 121 a~~t~lp~~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~-~~~~~~~~~~s 199 (310)
T PLN00052 121 AAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEG-WENQPKDDTFS 199 (310)
T ss_pred HHHhCCCcccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCccc-ccccccccchh
Confidence 99999999999999999999999999999998765444568999999999999999999999998743 22334567789
Q ss_pred ccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeecccc
Q 023053 231 ECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYK 287 (288)
Q Consensus 231 ~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
+|++.+++|+|++|+||+|+|+++||++|+.++|+||||++|+||++|+|||.++|.
T Consensus 200 ~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~~~ 256 (310)
T PLN00052 200 ECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRSYE 256 (310)
T ss_pred hhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeeccccc
Confidence 999999999999999999999999999999999999999999999999999999884
No 2
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-52 Score=381.49 Aligned_cols=262 Identities=46% Similarity=0.753 Sum_probs=216.5
Q ss_pred ccccccch--hHHHHHHHHHHHHHHHHHHHHhhHhcccc---CCCC-CCCCCcchhhhhhhcc----c--cccccccCce
Q 023053 8 RLQAKKWS--TLTLVLSMLFMLTIVLLMLLAMGIFYIPI---GDDD-SPPNDLTSFRRRAFEK----R--SSIAEEKGEQ 75 (288)
Q Consensus 8 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~----~--~~~~~~~~~~ 75 (288)
+..+++.. ..+.++.++.....+...+..+..+..+. ...+ .-..++.........+ . ++ +..-++.
T Consensus 10 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~g~~~~~~~~~~~~~~~~~~~~~-~~~~ap~ 88 (289)
T KOG1591|consen 10 KLGILKSALSLLTEVFSILPESIRALDNLKQLEQLLDKEQEFTVYEQGCRGELPPLTKLTLRRLSCRNRAGP-FLRLAPV 88 (289)
T ss_pred eccchHhhhhhcchhhhcchhhHHHhhhhhhhhhhccccccccchhhhccCccCccchhHhhhhhcccccCc-ceeecch
Confidence 45555543 34677777777777888888888888766 2211 1122222222221111 0 12 3455899
Q ss_pred eEEEeecCCCEEEEcCCCCHHHHHHHHHHhcCcCcccee-eeCCCCCccccceeeecceeecCCccHHHHHHHHHHHHhh
Q 023053 76 WTEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTV-VDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFT 154 (288)
Q Consensus 76 ~ve~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v-~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~ 154 (288)
|+|++||+|++++||||+|++||++|++++++.+.++++ .+..+|......+|+|+++|+..+.++++++|++||++++
T Consensus 89 k~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~~t~l~~~~~~~~~~i~~ri~~~T 168 (289)
T KOG1591|consen 89 KLEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSSGTFLPDGASPVVSRIEQRIADLT 168 (289)
T ss_pred hhhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecceeEecCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999998 4555677777779999999999878899999999999999
Q ss_pred CCCCCCCCceEEeecCCCCccccCcccccc---c-cccCCCCceEEEEEEeecCCCCCceeeecCCCccccccccccccc
Q 023053 155 FIPMEHGEGIQVLHYEVGQKYDAHYDYFLD---E-FNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELS 230 (288)
Q Consensus 155 ~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~---~-~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~ 230 (288)
+++.+++|.+||++|+.||+|.+|+|++.+ . .+..++|+|++|+++||+||++||+|+||.++.
T Consensus 169 ~l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~v~~GG~TvFP~~~~------------ 236 (289)
T KOG1591|consen 169 GLPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSDVEQGGETVFPNLGM------------ 236 (289)
T ss_pred CCCcccCccceEEEecCCccccccccccccccchhhhhcccCCcceeEEEEecccCCCCcccCCCCCC------------
Confidence 999999999999999999999999999953 2 345678999999999999999999999998642
Q ss_pred ccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeecccc
Q 023053 231 ECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYK 287 (288)
Q Consensus 231 ~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
.++|+|++|+|++|+|+++||..|+++.|++|||+.|+||+.++|+|++.++
T Consensus 237 -----~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~~~~ 288 (289)
T KOG1591|consen 237 -----KPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEKNQE 288 (289)
T ss_pred -----cccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeecccc
Confidence 2599999999999999999999999999999999999999999999998865
No 3
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=100.00 E-value=6.8e-37 Score=263.32 Aligned_cols=174 Identities=44% Similarity=0.745 Sum_probs=151.3
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCCccccceeeecceeecCCc-cHHHHHHHHHHHHhhCCC---CC
Q 023053 84 PRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQ-DRIIRGIEKRIADFTFIP---ME 159 (288)
Q Consensus 84 P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~-d~v~~~I~~ri~~~~~lp---~~ 159 (288)
|.|++++||||++||++||+++++...++++.++..+....+++|+|..+|+...+ +++++.|++||.++++.+ ..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 80 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLADFLGLLRGLPL 80 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHHHHHCCCchhhc
Confidence 78999999999999999999999987778777654433356789999999998764 789999999999999998 67
Q ss_pred CCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEE
Q 023053 160 HGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSV 239 (288)
Q Consensus 160 ~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V 239 (288)
..+.+|+.+|.+|++|.+|+|..... ..++|.+|+++||||+++||+|.||.... .....|
T Consensus 81 ~~~~~~~~~Y~~g~~~~~H~D~~~~~----~~~~r~~T~~~yLn~~~~GG~~~f~~~~~---------------~~~~~v 141 (178)
T smart00702 81 SAEDAQVARYGPGGHYGPHVDNFEDD----ENGDRIATFLLYLNDVEEGGELVFPGLGL---------------MVCATV 141 (178)
T ss_pred cCcceEEEEECCCCcccCcCCCCCCC----CCCCeEEEEEEEeccCCcCceEEecCCCC---------------ccceEE
Confidence 88999999999999999999997642 12689999999999999999999998531 135699
Q ss_pred ecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 240 KPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 240 ~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
+|++|++|+|++.. +.++|++|||++|+||++++|+|
T Consensus 142 ~P~~G~~v~f~~~~------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 142 KPKKGDLLFFPSGR------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred eCCCCcEEEEeCCC------CCccccCCcceeCCEEEEEEEEC
Confidence 99999999999742 37999999999999999999986
No 4
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.96 E-value=1.9e-29 Score=224.88 Aligned_cols=164 Identities=24% Similarity=0.314 Sum_probs=125.7
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCcCccceeeeCC-CCCccccceeeecceeecCCccHHHHHHHHHHHHhh---------C
Q 023053 86 AFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSK-TGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFT---------F 155 (288)
Q Consensus 86 i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~-~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~---------~ 155 (288)
+++++|+||++||+++|+..+.. ...++. |.+...+++|+|.++-. ++++.+.|.++|.+.. .
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~----~~~dg~~taG~~~~~vKnN~ql~~---d~~~a~~l~~~i~~~L~~~~l~~sa~ 74 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAA----EWVDGRVTAGAQAAQVKNNQQLPE---DSPLARELGNLILDALTRNPLFFSAA 74 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhc----CCccCCcCcCccchhcccccccCC---CCHHHHHHHHHHHHHHhcCchhhhhc
Confidence 68999999999999999999763 222322 23345778999886542 3556667777766543 3
Q ss_pred CCCCCCCceEEeecCCCCccccCccccccccc-cCCCCceEEEEEEeecCCC--CCceeeecCCCccccccccccccccc
Q 023053 156 IPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFN-TKNGGQRMATLLMYLSDVE--EGGETVFPAANANFTSVRWWNELSEC 232 (288)
Q Consensus 156 lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~-~~~~~~R~~T~liYLNDv~--eGGeT~Fp~~~~~~s~~~~~~~~~~c 232 (288)
+|.. ..+++|+||++|++|++|+|++..... .....+|.+|+++||||++ +||||+|+...
T Consensus 75 lp~~-i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~--------------- 138 (226)
T PRK05467 75 LPRK-IHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTY--------------- 138 (226)
T ss_pred cccc-cccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCC---------------
Confidence 4433 357899999999999999999764211 1122356899999999874 89999998642
Q ss_pred CCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 233 GKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 233 ~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
....|+|++|++|+|++ .++|+|+||++|.||+++.|++.
T Consensus 139 --g~~~Vkp~aG~~vlfps---------~~lH~v~pVt~G~R~~~~~Wi~S 178 (226)
T PRK05467 139 --GEHRVKLPAGDLVLYPS---------TSLHRVTPVTRGVRVASFFWIQS 178 (226)
T ss_pred --CcEEEecCCCeEEEECC---------CCceeeeeccCccEEEEEecHHH
Confidence 35789999999999985 79999999999999999999864
No 5
>PHA02813 hypothetical protein; Provisional
Probab=99.76 E-value=5e-18 Score=157.79 Aligned_cols=149 Identities=19% Similarity=0.253 Sum_probs=110.4
Q ss_pred HHHHHHHHhcCcCccceeeeCCCC-CccccceeeecceeecCCccHHHHHHHHHHHHhh-CCC----CCCCCceEEeecC
Q 023053 97 ECEYLIDLAKPYMVKSTVVDSKTG-QSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFT-FIP----MEHGEGIQVLHYE 170 (288)
Q Consensus 97 EC~~Li~~a~~~l~~s~v~~~~~g-~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~-~lp----~~~~E~lqv~rY~ 170 (288)
+.-.+|+...-.+.+|.+.+..+| +...+++|+|.++.++.. +.+.++|++.+.+-+ +.+ ++.+|+++++||.
T Consensus 24 ~l~~~i~~~d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~-~~L~erIr~~Lp~~l~~~~lv~~V~vnerirfyrY~ 102 (354)
T PHA02813 24 IIMDMIKYKDIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL-DDIFKVIRKKLLLSFEFPQKISDIILDNTITLIKYE 102 (354)
T ss_pred HHHHHHhccccCccccceeccccCceEEccccccceEEEEcCH-HHHHHHHHHhhHHHhcCCccceeEEEcceEEEEEEC
Confidence 333344433333567778775554 457788999999998853 456666665555433 222 4678999999999
Q ss_pred CCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEe
Q 023053 171 VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFW 250 (288)
Q Consensus 171 ~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~ 250 (288)
+||+|++|.|+.... .. ..+.+|+|+|||++++||||.|.... .-+|. .|++|+|.
T Consensus 103 kGq~F~~H~Dg~~~r---~k-~~s~~tLLLYLN~~~~GGeT~f~~~~------------------~tsI~--~g~dlLFd 158 (354)
T PHA02813 103 KGDFFNNHRDFIHFK---SK-NCYCYHLVLYLNNTSKGGNTNIHIKD------------------NTIFS--TKNDVLFD 158 (354)
T ss_pred CCcccCcccCCceee---cC-CceEEEEEEEEeccCCCCceEEEcCC------------------CceEe--ecceEEEe
Confidence 999999999986531 11 22899999999999999999998642 12466 99999995
Q ss_pred cCCCCCCCCCCCccccCCCccceEEEEEE
Q 023053 251 SMRPDATLDPSSLHGGCPVIRGNKWSATK 279 (288)
Q Consensus 251 n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 279 (288)
+...|+|++|.+|.||++..
T Consensus 159 ---------h~l~Heg~~V~sG~KyVa~~ 178 (354)
T PHA02813 159 ---------KTLNHSSDIITDGEKNIALI 178 (354)
T ss_pred ---------cccccCCcEeccCeEEEEEE
Confidence 69999999999999998753
No 6
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=99.74 E-value=9.8e-18 Score=157.78 Aligned_cols=138 Identities=22% Similarity=0.237 Sum_probs=108.0
Q ss_pred CccceeeeCCCCC-ccccceeeecceeecCCccHHHHHHHHHHHHhh-----CC--CCCCCCceEEeecCCCCccccCcc
Q 023053 109 MVKSTVVDSKTGQ-SKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFT-----FI--PMEHGEGIQVLHYEVGQKYDAHYD 180 (288)
Q Consensus 109 l~~s~v~~~~~g~-~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~-----~l--p~~~~E~lqv~rY~~G~~y~~H~D 180 (288)
+.+|.+.+.++|. -.+...|+|.+..+. +.+.+.|.+|++.+. +. .++.+|+++++||.+||+|++|.|
T Consensus 45 ~~~s~i~~~~~g~e~~~~~~~ksKqii~e---~~La~~L~erlr~lLp~~lk~~v~~V~lnerirfyrY~kGq~F~~H~D 121 (418)
T PHA02869 45 CEDSKIFFPEKRTELLSIKDRKSKQIVFE---NSLNDDLLKKLHALIYDELSTVVDSVTVENTVTLIMYEKGDYFARHRD 121 (418)
T ss_pred cccceeeccccCceeEeeccccceeEEec---hHHHHHHHHHHHHhhhHHhhCccceEEEcceEEEEEECCCCccccccc
Confidence 4677787766663 345667899888776 345566666665542 32 456789999999999999999999
Q ss_pred ccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCC
Q 023053 181 YFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDP 260 (288)
Q Consensus 181 ~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~ 260 (288)
+... ..+....+|+|+|||++++||||.|+.. ....|.|+.| |+|. +
T Consensus 122 g~~~----rs~e~s~~tLLLYLNd~~~GGET~f~~~------------------~~~sI~pksg--LLFd---------h 168 (418)
T PHA02869 122 FSTV----FSKNIICVHLLLYLEQPETGGETVIYID------------------NNTSVKLKTD--HLFD---------K 168 (418)
T ss_pred Ccee----cCCCEEEEEEEEEEeccCCCCceEEEeC------------------CCceEecCCC--eEec---------c
Confidence 8653 2356678999999999999999999972 2467999999 9994 6
Q ss_pred CCccccCCCccceEEEEEEeee
Q 023053 261 SSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 261 ~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
...|+|++|.+|.||+++.=+.
T Consensus 169 ~l~Heg~~V~sG~KyVartDVm 190 (418)
T PHA02869 169 TIEHESITVESGRKCVALFDVL 190 (418)
T ss_pred ccccCCcEeecCeEEEEEEEEE
Confidence 8999999999999999976443
No 7
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=99.68 E-value=3.4e-16 Score=133.67 Aligned_cols=165 Identities=22% Similarity=0.308 Sum_probs=118.2
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCC-CCCccccceeeecceeecCCccHHHHHHHHHHHHh-------hC
Q 023053 84 PRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSK-TGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADF-------TF 155 (288)
Q Consensus 84 P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~-~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~-------~~ 155 (288)
+..+.|+.+||+++|.++.+..+. +..+++. +-+.....+|++.+.-.+ .+..+.+..-|.+. .+
T Consensus 2 ~m~lhIp~VLs~a~va~iRa~l~~----A~w~dGrat~g~q~a~vk~n~qlp~~---s~l~~~vg~~il~al~~~plff~ 74 (229)
T COG3128 2 IMMLHIPEVLSEAQVARIRAALEQ----AEWVDGRATQGPQGAQVKNNLQLPQD---SALARELGNEILQALTAHPLFFA 74 (229)
T ss_pred ceEEechhhCCHHHHHHHHHHHhh----ccccccccccCcchhhhhccccCCcc---cHHHHHHHHHHHHHHHhchhHHH
Confidence 345679999999999999988764 3344433 222344567777654322 23444444333322 22
Q ss_pred --CCCCCCCceEEeecCCCCccccCccccccccccCCCC---ceEEEEEEeecCCC--CCceeeecCCCccccccccccc
Q 023053 156 --IPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGG---QRMATLLMYLSDVE--EGGETVFPAANANFTSVRWWNE 228 (288)
Q Consensus 156 --lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~---~R~~T~liYLNDv~--eGGeT~Fp~~~~~~s~~~~~~~ 228 (288)
+|. ..++.+|.+|..|++|.+|.|+...... ...+ +..+++.+||+|++ +|||++..+.-
T Consensus 75 aALp~-t~~~P~Fn~Y~eg~~f~fHvDgavr~~h-p~~~~~lrtdls~tlfl~DPedYdGGeLVv~dtY----------- 141 (229)
T COG3128 75 AALPR-TCLPPLFNRYQEGDFFGFHVDGAVRSIH-PGSGFRLRTDLSCTLFLSDPEDYDGGELVVNDTY----------- 141 (229)
T ss_pred hhccc-ccCCchhhhccCCCcccccccCcccccC-CCCCceeEeeeeeeeecCCccccCCceEEEeccc-----------
Confidence 332 4678999999999999999999765321 1122 23577889999986 89999997653
Q ss_pred ccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 229 LSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 229 ~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+...||-.+|++++|++ .++|++.||++|+|+.+..|++.
T Consensus 142 ------g~h~VklPAGdLVlypS---------tSlH~VtPVTRg~R~asffW~qs 181 (229)
T COG3128 142 ------GNHRVKLPAGDLVLYPS---------TSLHEVTPVTRGERFASFFWIQS 181 (229)
T ss_pred ------cceEEeccCCCEEEccc---------ccceeccccccCceEEEeeehHH
Confidence 46789999999999996 89999999999999999999864
No 8
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=99.65 E-value=2.2e-16 Score=123.09 Aligned_cols=91 Identities=38% Similarity=0.592 Sum_probs=69.8
Q ss_pred eEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCC---CCceeeecCCCcccccccccccccccCCCCeEE-
Q 023053 164 IQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE---EGGETVFPAANANFTSVRWWNELSECGKQGLSV- 239 (288)
Q Consensus 164 lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~---eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V- 239 (288)
+|+.+|.+|++|+||+|... ...+.+|+++|||+++ +||+|+|.... ... .....+
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~-------~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~------------~~~~~~~ 60 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSY-------DPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSD------------DVSREVE 60 (100)
T ss_dssp -EEEEEETTEEEEEEESSSC-------CCSEEEEEEEESS-CS-HCEE--EEETTTS--TS------------STCEEEG
T ss_pred CEEEEECcCCEEeeeECCCC-------CCcceEEEEEEECCCCcccCCCEEEEeccc-cCC------------CcceEEE
Confidence 47999999999999999753 3568999999999876 99999998642 100 012233
Q ss_pred ----ecCCCcEEEEecCCCCCCCCCCCccccCCC-ccceEEEEEEeee
Q 023053 240 ----KPKRGDALLFWSMRPDATLDPSSLHGGCPV-IRGNKWSATKWMH 282 (288)
Q Consensus 240 ----~Pk~G~allF~n~~~~g~~D~~~lH~g~PV-~~G~K~i~~~W~~ 282 (288)
+|+.|++++|++ ..++|++.|| ..|.|++++.|++
T Consensus 61 ~~~~~p~~g~~v~F~~--------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 61 DFDIVPKPGRLVIFPS--------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp GGSEE-BTTEEEEEES--------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eccccCCCCEEEEEeC--------CCCeecCcccCCCCCEEEEEEEEC
Confidence 399999999986 4899999999 8999999999986
No 9
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=99.06 E-value=1.8e-09 Score=95.27 Aligned_cols=168 Identities=23% Similarity=0.339 Sum_probs=111.4
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCc-----CccceeeeCCCCCccccceeeecceeecCCcc--HHHH----HHHHHHH
Q 023053 83 EPRAFVYHNFLSKAECEYLIDLAKPY-----MVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQD--RIIR----GIEKRIA 151 (288)
Q Consensus 83 ~P~i~vi~nfLs~eEC~~Li~~a~~~-----l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d--~v~~----~I~~ri~ 151 (288)
+-.+.+++|||-.+--..+.+..+.. +.+..++... ....+++|.....|+...+. .-+. .|..-+.
T Consensus 52 e~g~~vvd~flg~~~g~~v~~ev~~l~~~G~f~dgql~~~~--~~~~k~iRgd~i~wi~G~e~gc~~i~~L~s~~d~~i~ 129 (280)
T KOG3710|consen 52 EYGICVVDNFLGSETGKFILKEVEALYETGAFRDGQLVSPD--AFHSKDIRGDKITWVGGNEPGCETIMLLPSPIDSVIL 129 (280)
T ss_pred hcceEEEechhhHHHHHHHHHHHHHHHhccCccCceeccCc--CCcchhhccCCceEecCCCCCccceeeecccchhhhh
Confidence 34578899999998766666665432 4444444322 22345789999999986431 1111 1111111
Q ss_pred Hh---hCCCCCCCCceEEeecC-CCCccccCccccccccccCCCCceEEEEEEeecC---CC-CCcee-eecCCCccccc
Q 023053 152 DF---TFIPMEHGEGIQVLHYE-VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSD---VE-EGGET-VFPAANANFTS 222 (288)
Q Consensus 152 ~~---~~lp~~~~E~lqv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND---v~-eGGeT-~Fp~~~~~~s~ 222 (288)
.. .+-....-.+-.|+.|. -|..|-.|.|+.. +-.|..|++.|||. +. .||.+ .||....
T Consensus 130 h~~~r~~~~~~gRtkAMVAcYPGNGtgYVrHVDNP~-------gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~---- 198 (280)
T KOG3710|consen 130 HCNGRLGSYIIGRTKAMVACYPGNGTGYVRHVDNPH-------GDGRCITCIYYLNQNWDVKVHGGILRIFPEGST---- 198 (280)
T ss_pred hhccccccccccceeEEEEEecCCCceeeEeccCCC-------CCceEEEEEEEcccCcceeeccceeEeccCCCC----
Confidence 11 11111113467789998 4778999999753 45699999999994 43 45555 5776543
Q ss_pred ccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 223 VRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 223 ~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.-..|.|+-++.||||| |.+-.|++.|+.. +||.|+.|+-.
T Consensus 199 ------------~~adieP~fdrLlffwS-------drrnPhev~Pa~~-tryaitvwyfd 239 (280)
T KOG3710|consen 199 ------------TFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFD 239 (280)
T ss_pred ------------cccccCcCCCeEEEEEe-------cCCCccccccccc-cceEEEEEEec
Confidence 34579999999999999 6788999999986 79999999864
No 10
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=98.64 E-value=3e-07 Score=85.88 Aligned_cols=125 Identities=24% Similarity=0.300 Sum_probs=90.6
Q ss_pred cccceeeecceeecC-CccHHHHHHHHHHHHhhCC---CCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEE
Q 023053 123 KDSRVRTSSGTFLKR-GQDRIIRGIEKRIADFTFI---PMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATL 198 (288)
Q Consensus 123 ~~~~~R~s~~~~l~~-~~d~v~~~I~~ri~~~~~l---p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~ 198 (288)
.+...|.|.+..+.. ..+++.++|++.+..-+-- .+...+.+.+.+|++|++|..|.|.... ........++
T Consensus 36 ~d~~~r~sk~iv~~~~~~~dI~~~ik~~l~~~lk~~v~~V~V~n~iTfikY~kGd~f~~~~d~~~~----~~~n~~~y~L 111 (339)
T PF03336_consen 36 FDHEFRKSKQIVIEDSLNDDIFSKIKNLLYDELKNVVEDVIVDNTITFIKYEKGDFFDNHRDFIKR----DSKNCLEYHL 111 (339)
T ss_pred ccccccccceEEEeccchHHHHHHHHHHHHHHhhcceeEEEEcceEEEEEEccCcchhhhccccee----ccCCceEEEE
Confidence 344488888877663 3467888888776654321 2334678999999999999999994332 3345578999
Q ss_pred EEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEE
Q 023053 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSAT 278 (288)
Q Consensus 199 liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~ 278 (288)
++||+.+++||+|.+.--.. ..-.|.+ ++-++| |....|++.+|.+|.|++|.
T Consensus 112 vLyL~~~~~GGktkiyi~~~----------------~~tvI~~--~~DvLF---------dKsl~h~s~~V~~G~K~VAl 164 (339)
T PF03336_consen 112 VLYLNNPENGGKTKIYIDPN----------------DNTVIST--SEDVLF---------DKSLNHESIIVEEGRKIVAL 164 (339)
T ss_pred EEEEeccCCCceEEEEECCC----------------Cceeeec--cccEEE---------eccccccceEeccCeEEEEE
Confidence 99999999999999873211 1112433 667888 47899999999999999964
No 11
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=98.57 E-value=9e-08 Score=70.34 Aligned_cols=52 Identities=29% Similarity=0.455 Sum_probs=43.4
Q ss_pred CCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeec----CCCCCceeeecCC
Q 023053 161 GEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLS----DVEEGGETVFPAA 216 (288)
Q Consensus 161 ~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLN----Dv~eGGeT~Fp~~ 216 (288)
.+.++..+|..|++|++|.|..... .+.+|.+|++|||| +..+||++.|...
T Consensus 10 ~~~~~~~~~~~g~~~~~H~D~~~~~----~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~ 65 (70)
T PF13661_consen 10 RPNFRFYRYRRGDFFGWHVDADPSS----SGKRRFLTLLLYLNEDWDEDFGGGELFFDDD 65 (70)
T ss_pred CcceeEEEcCCCCEeeeeEcCCccc----cccceeEEEEEEecccccCccCCcEEEEeCC
Confidence 5679999999999999999986532 25789999999999 4457999999864
No 12
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.57 E-value=7.7e-08 Score=74.46 Aligned_cols=90 Identities=20% Similarity=0.297 Sum_probs=56.5
Q ss_pred CceEEeecC---CCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeE
Q 023053 162 EGIQVLHYE---VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLS 238 (288)
Q Consensus 162 E~lqv~rY~---~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~ 238 (288)
+.+++.+|. .+..+.+|+|.. .+.+|++++ .++|++.|.... ..+.
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----------~~~~Til~~----~~~~gL~~~~~~-----------------~~~~ 50 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----------DGLLTILFQ----DEVGGLQVRDDG-----------------EWVD 50 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------------SSEEEEEE----TSTS-EEEEETT-----------------EEEE
T ss_pred CEEEEEECCCcccCCceeCCCcCC----------CCeEEEEec----ccchheeccccc-----------------cccC
Confidence 468999999 899999999964 468999999 668899998643 2466
Q ss_pred EecCCCcEEEEe-cCC--CCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 239 VKPKRGDALLFW-SMR--PDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 239 V~Pk~G~allF~-n~~--~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
|.|..+.++++. ++. -.+...+...|+++++.+|.|++++.|++
T Consensus 51 v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~ 97 (98)
T PF03171_consen 51 VPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLR 97 (98)
T ss_dssp ----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred ccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence 777666666554 311 11334678999999999999999999986
No 13
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=98.39 E-value=1.8e-06 Score=78.27 Aligned_cols=102 Identities=25% Similarity=0.271 Sum_probs=77.6
Q ss_pred CceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecC---CCCCcee-eecCCCcccccccccccccccCCCCe
Q 023053 162 EGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSD---VEEGGET-VFPAANANFTSVRWWNELSECGKQGL 237 (288)
Q Consensus 162 E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND---v~eGGeT-~Fp~~~~~~s~~~~~~~~~~c~~~~~ 237 (288)
-+.|+..|.+|.+|..|-|.+.+ ...|.+|.++|+|. .+-|||+ .|+....+... +....
T Consensus 136 ve~~~~~y~~G~~l~~H~D~~~~------~~~R~~~yv~y~~r~wkpe~GGeL~l~~s~~~~~~~----------~~~~~ 199 (252)
T COG3751 136 VEGQITVYNPGCFLLKHDDNGRD------KDIRLATYVYYLTREWKPEYGGELRLFHSLQKNNTA----------ADSFK 199 (252)
T ss_pred eeeeeeEecCCceeEeecccCCC------ccceEEEEEeccCCCCCcCCCCceeecccccccccc----------ccccc
Confidence 36899999999999999998753 35699999999997 4689999 77765432110 01246
Q ss_pred EEecCCCcEEEEecCCCCCCCCCCCccccCCCc-cceEEEEEEeeeecc
Q 023053 238 SVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI-RGNKWSATKWMHVHE 285 (288)
Q Consensus 238 ~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~W~~~~~ 285 (288)
+|.|+-+.+++|.+-. ..+.|.+.+|. .+.|.++++|++-+.
T Consensus 200 ti~P~fn~lv~F~s~~------~Hs~h~V~~~~~~~~RlsV~GW~r~~~ 242 (252)
T COG3751 200 TIAPVFNSLVFFKSRP------SHSVHSVEEPYAAADRLSVTGWFRRPG 242 (252)
T ss_pred ccCCCCceEEEEEecC------CccceeccccccccceEEEeeEEecCC
Confidence 7999999999997621 24788887754 458999999998653
No 14
>PHA02866 Hypothetical protein; Provisional
Probab=98.13 E-value=1.1e-05 Score=74.07 Aligned_cols=131 Identities=16% Similarity=0.211 Sum_probs=89.1
Q ss_pred CccceeeeCCCC-CccccceeeecceeecCCccHHHHHHHHHHHHhhC--CCCCCCCceEEeecCCCCccccCccccccc
Q 023053 109 MVKSTVVDSKTG-QSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTF--IPMEHGEGIQVLHYEVGQKYDAHYDYFLDE 185 (288)
Q Consensus 109 l~~s~v~~~~~g-~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~~--lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~ 185 (288)
+.+|.+.+...| .-.....|.|.++ ++++.+++ |+..+.. ...-..+.+.+.+|..|.+|.-|+|....
T Consensus 32 w~~s~i~~~~~~i~~~~~~~~k~k~~------~~v~~~v~-~~~~~~~~~~dv~v~~~~t~vk~~kg~~fdn~~~~~~~- 103 (333)
T PHA02866 32 WEDSDILRHRQFIPCEILVLEKSERT------KQVFGAVK-RVLASSLTDYDVYVCEHLTIVKCFKGVGFDNRFSILTE- 103 (333)
T ss_pred cchhhhhhhccCCceeeeehhhhhhh------HHHHHHHH-HHHhccCCCccEEEeeeEEEEEEecccccccceeEEEe-
Confidence 667777665444 3344556666654 56777776 4544422 22234567999999999999999997543
Q ss_pred cccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccc
Q 023053 186 FNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHG 265 (288)
Q Consensus 186 ~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~ 265 (288)
.....+-.++++||+.+++||+|.++-... -.+.- + +=++| |.+..|+
T Consensus 104 ---~~~~~~~Y~LvLyL~~p~~GGkt~iyv~~~------------------t~i~~-~-~DvLF---------DKsl~h~ 151 (333)
T PHA02866 104 ---DRHRGREYTLVLHLSSPKNGGKTDVCVGDK------------------TVIST-A-DDFLL---------EKRSEQL 151 (333)
T ss_pred ---ccCCceEEEEEEEEeccccCCceEEEeCCC------------------ceEee-c-cceee---------ecccccc
Confidence 223457899999999999999999984321 11221 1 23666 4789999
Q ss_pred cCCCccceEEEEEE
Q 023053 266 GCPVIRGNKWSATK 279 (288)
Q Consensus 266 g~PV~~G~K~i~~~ 279 (288)
..-|.+|+|.++..
T Consensus 152 S~~V~~G~K~Vali 165 (333)
T PHA02866 152 SNVVQEGEKIVVAV 165 (333)
T ss_pred ceeeecCcEEEEEE
Confidence 99999999987643
No 15
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=98.07 E-value=8.7e-05 Score=68.47 Aligned_cols=182 Identities=14% Similarity=0.137 Sum_probs=92.7
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCC--ccccceeeecceeecCCccHHHH------HHHHHHHHhhCC
Q 023053 85 RAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQ--SKDSRVRTSSGTFLKRGQDRIIR------GIEKRIADFTFI 156 (288)
Q Consensus 85 ~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~--~~~~~~R~s~~~~l~~~~d~v~~------~I~~ri~~~~~l 156 (288)
..++++++|+++||+.|.+..+..+..........+. ......|.. +.....++.+. +|...++++.|-
T Consensus 29 Gyvvl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~~l~~~p~l~~~~~~LlG~ 105 (277)
T TIGR02408 29 GFLLLENLFSDDEVAALLAEVERMTRDPAIVRDEEAITEPGSNAVRSI---FEVHVLSPILARLVRDPRVANAARQILGS 105 (277)
T ss_pred CEEECcccCCHHHHHHHHHHHHHHHhcccccCCCcceecCCCCceEEE---ecccccCHHHHHHHcChHHHHHHHHHcCC
Confidence 3578999999999999999887643221110000000 001122221 11111233333 234455566664
Q ss_pred CCCCCCceEEeecC-CCCccccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCccc----cccc--ccc
Q 023053 157 PMEHGEGIQVLHYE-VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANF----TSVR--WWN 227 (288)
Q Consensus 157 p~~~~E~lqv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~----s~~~--~~~ 227 (288)
++......-+.+.. .|+.+.||.|...-.........+.+|+.++|.|+. +.|.+.| |...... ...+ .++
T Consensus 106 ~~~l~~~~l~~kp~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~t~eNG~l~vIPGSH~~~~~~~~~~~~~~~~ 185 (277)
T TIGR02408 106 DVYVHQSRINMKPGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDNNETNGPLMLVPGSHRTFISCVGETPRDNYK 185 (277)
T ss_pred CeEEEeeeeeecCCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccCCCCCCCEEEecCCCCCcccCCccccchhhh
Confidence 43221111123343 356788999964211000111236899999999986 3376766 5432210 0000 000
Q ss_pred -c-------cccc-------C-CCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc-eEEEEE
Q 023053 228 -E-------LSEC-------G-KQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG-NKWSAT 278 (288)
Q Consensus 228 -~-------~~~c-------~-~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~ 278 (288)
. ..+. . ..-+.+.-++|++|+|. ..++|++-|-.+. .|+++.
T Consensus 186 ~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~---------~~~~H~S~~N~s~~~R~~l~ 244 (277)
T TIGR02408 186 QSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFD---------CNTMHGSGSNITPWPRSNVF 244 (277)
T ss_pred hhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEc---------cccccCCCCCCCCCcceeEE
Confidence 0 0000 0 11235667999999996 5899999998876 455543
No 16
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=97.77 E-value=0.0002 Score=61.15 Aligned_cols=168 Identities=18% Similarity=0.091 Sum_probs=85.1
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCc----Ccc---ceeeeCCCCCccccceeeecceeecCCc---cHHH-H-HHHHHHHH
Q 023053 85 RAFVYHNFLSKAECEYLIDLAKPY----MVK---STVVDSKTGQSKDSRVRTSSGTFLKRGQ---DRII-R-GIEKRIAD 152 (288)
Q Consensus 85 ~i~vi~nfLs~eEC~~Li~~a~~~----l~~---s~v~~~~~g~~~~~~~R~s~~~~l~~~~---d~v~-~-~I~~ri~~ 152 (288)
..++++|+|+++||+.|.+..+.. ... ...... +.. .. ....++.... +.+. . .+...+.+
T Consensus 5 Gyvvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (211)
T PF05721_consen 5 GYVVIRNVLSPEEVERLREELDRLDDRALEPDQDVSDFFD--ESF-FG----DYTEQLAKSPNFYDLFLHPPRILDLVRA 77 (211)
T ss_dssp SEEEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSCEEEES--TSC-CC----TCCCCGCCCHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEECCcCCHHHHHHHHHHHHHHHhhhhccccccccccc--ccc-cc----ccccccccchhhHHHHhhHHHHHHHHHH
Confidence 357899999999999999988653 111 011100 000 00 0001111100 1111 2 46666677
Q ss_pred hhCCCCC----CCCceE-EeecC-CCCcc-ccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCcccccc
Q 023053 153 FTFIPME----HGEGIQ-VLHYE-VGQKY-DAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFTSV 223 (288)
Q Consensus 153 ~~~lp~~----~~E~lq-v~rY~-~G~~y-~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s~~ 223 (288)
+.|.... ....++ +.+-. +|... .||.|...-.. ....+.+|+.++|.|+. +.|.+.+ |..... ...
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~---~~~~~~~~~wi~L~d~~~~~G~~~v~pGSH~~-~~~ 153 (211)
T PF05721_consen 78 LLGSDVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHT---DPPENQLTVWIALDDITPENGPLEVVPGSHKW-GVE 153 (211)
T ss_dssp HHTSSEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTE---ESSSCEEEEEEESS-BBTTCTCEEEETTGCCS-CCE
T ss_pred hhCCcchhhhhhHHHHHhhhhccccCCCCCCCCCCCccccc---CCccceEEEEEeeccCCcccCceEeecCCcCC-Ccc
Confidence 7765432 111221 23332 46665 99999754321 11578999999999984 5566665 433211 100
Q ss_pred c-cccc-----c-------cccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 224 R-WWNE-----L-------SECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 224 ~-~~~~-----~-------~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+ .+.. . .......+.+..++|++|+|. ..++|++-|-.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~---------~~~~H~s~~N~s~ 206 (211)
T PF05721_consen 154 PHEERFPEEDFPEEDDEESDEDEDEWVPVPMKAGDVLFFH---------SRLIHGSGPNTSD 206 (211)
T ss_dssp EECCCCCCCCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEE---------TTSEEEEE-B-SS
T ss_pred cccccccccccccccccccccccCceEEeecCCCeEEEEc---------CCccccCCCCCCc
Confidence 0 0000 0 011134578999999999996 5999999986543
No 17
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=97.73 E-value=0.00011 Score=57.55 Aligned_cols=92 Identities=21% Similarity=0.199 Sum_probs=48.4
Q ss_pred EeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccc-c-ccccccccCCCCeEEecCC
Q 023053 166 VLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSV-R-WWNELSECGKQGLSVKPKR 243 (288)
Q Consensus 166 v~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~-~-~~~~~~~c~~~~~~V~Pk~ 243 (288)
+..|.+|++-.+|.= ....++.++||+.+++.|.+.|.+........ + .+............++|+.
T Consensus 4 ~ni~~~g~~~~~H~H-----------~~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 72 (101)
T PF13759_consen 4 ANIYRKGGYNEPHNH-----------PNSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEE 72 (101)
T ss_dssp EEEE-TT--EEEE-------------TT-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---T
T ss_pred EEEeCCCCccCceEC-----------CCcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCC
Confidence 345778888888743 23479999999998888999997653321111 1 0111111223567899999
Q ss_pred CcEEEEecCCCCCCCCCCCccccCCCccc-eEEEE
Q 023053 244 GDALLFWSMRPDATLDPSSLHGGCPVIRG-NKWSA 277 (288)
Q Consensus 244 G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~ 277 (288)
|++|||++ .+.|++.|-... +|.++
T Consensus 73 G~lvlFPs---------~l~H~v~p~~~~~~Risi 98 (101)
T PF13759_consen 73 GDLVLFPS---------WLWHGVPPNNSDEERISI 98 (101)
T ss_dssp TEEEEEET---------TSEEEE----SSS-EEEE
T ss_pred CEEEEeCC---------CCEEeccCcCCCCCEEEE
Confidence 99999996 899999999875 66665
No 18
>KOG3844 consensus Predicted component of NuA3 histone acetyltransferase complex [Chromatin structure and dynamics]
Probab=97.71 E-value=0.00031 Score=67.00 Aligned_cols=171 Identities=18% Similarity=0.260 Sum_probs=102.2
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCc--CccceeeeCCCCCccccceeeecceeec---CCccHHHHHHHHHHHHhhCCCCCC
Q 023053 86 AFVYHNFLSKAECEYLIDLAKPY--MVKSTVVDSKTGQSKDSRVRTSSGTFLK---RGQDRIIRGIEKRIADFTFIPMEH 160 (288)
Q Consensus 86 i~vi~nfLs~eEC~~Li~~a~~~--l~~s~v~~~~~g~~~~~~~R~s~~~~l~---~~~d~v~~~I~~ri~~~~~lp~~~ 160 (288)
-+++++|+++...+.+.+..... +.+-. .|-- .-.+..+.++-++.-.. .-.+.+.......+.+++|.-...
T Consensus 38 h~~i~~~vnd~~l~~vrkei~~~~~f~~k~-tDly-r~~QtgdL~nl~~le~p~lf~~r~~Lyke~r~~~q~vtg~~s~s 115 (476)
T KOG3844|consen 38 HFIIRDFVNDSLLRVVRKEIHGSIHFTEKE-TDLY-RVLQTGDLANLEGLEFPALFSFRDSLYKEARGEIQDVTGGLSTS 115 (476)
T ss_pred ceeeeccCCHHHHHHHHHHHhhccchhhhc-chhh-heeccccccccccccchhHHHHHHHHHHHHHHHHHhccCccccc
Confidence 47899999998888887554432 11100 0000 00001112222211000 001223334444455556432222
Q ss_pred CCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCC----CCceee-ecCCCcccccccccccccccCCC
Q 023053 161 GEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE----EGGETV-FPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 161 ~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~----eGGeT~-Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
--++-...|..|.+--.|-|-. +.|.+++++||-|.. -||++. ||........ ..
T Consensus 116 k~Dms~s~Y~kgd~LL~HDD~i---------etRriaFilYL~~~Dwds~~GG~L~Lf~~d~~~~P~-----------s~ 175 (476)
T KOG3844|consen 116 KIDMSGSYYRKGDHLLCHDDVI---------ETRRIAFILYLVDPDWDSEYGGELRLFPDDCPSQPK-----------SV 175 (476)
T ss_pred eeeeceeeeeccceeccccccc---------cceEEEEEEEecCcccccccCceeEecccccccCcc-----------ch
Confidence 3467889999999999997743 568999999999864 388886 4443221110 11
Q ss_pred CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccce-EEEEEEeeeecc
Q 023053 236 GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGN-KWSATKWMHVHE 285 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~-K~i~~~W~~~~~ 285 (288)
-.++.|+-...++|.- -|-+.|.+.-|.+.+ |.++++|+|.+.
T Consensus 176 ~asl~P~~Nql~fFeV-------sp~SFH~V~Ev~sde~RlSIsGWfH~p~ 219 (476)
T KOG3844|consen 176 AASLEPQWNQLVFFEV-------SPISFHDVEEVLSDEPRLSISGWFHFPQ 219 (476)
T ss_pred hhccCcccceEEEEEe-------cccchhhHHHHhccCcceeEeeeecCCc
Confidence 2458899999888863 378999999999875 499999999874
No 19
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=97.68 E-value=0.00017 Score=61.16 Aligned_cols=102 Identities=23% Similarity=0.312 Sum_probs=73.1
Q ss_pred ceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCC---CCCceeeecCCCcccccccccccccccCCCCeEE
Q 023053 163 GIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDV---EEGGETVFPAANANFTSVRWWNELSECGKQGLSV 239 (288)
Q Consensus 163 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv---~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V 239 (288)
...+++|++|++-..|.|..-+.+ =-+-+.+-||++ ++|||.++-...... +.....+
T Consensus 63 tplllrY~~gdyn~LHqdlyGe~v-------FPlQvv~lLs~Pg~DftGGEFVltEQrPR~------------QSR~~V~ 123 (173)
T PF09859_consen 63 TPLLLRYGPGDYNCLHQDLYGEHV-------FPLQVVILLSEPGEDFTGGEFVLTEQRPRM------------QSRAMVL 123 (173)
T ss_pred chhhheeCCCCccccccCCCCCcc-------cCeEEEEEcCCCCCcccCceEEEEEecCCc------------cCccccC
Confidence 467899999999999999642210 124577789985 589999986543221 1245678
Q ss_pred ecCCCcEEEEe-cCCCC----CCCCCCCccccCCCccceEEEEEEeeee
Q 023053 240 KPKRGDALLFW-SMRPD----ATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 240 ~Pk~G~allF~-n~~~~----g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+++|+++||. +.+|- |----.+-|++.+|.+|+++.+..=||.
T Consensus 124 ~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgliFHD 172 (173)
T PF09859_consen 124 PLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGLIFHD 172 (173)
T ss_pred CcCCCCEEEEecCCCCcCCCccceecccccccccccccceEEEEEEeec
Confidence 99999999997 33332 2222467899999999999999877764
No 20
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=97.35 E-value=0.011 Score=54.97 Aligned_cols=182 Identities=12% Similarity=0.134 Sum_probs=95.2
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcCcCc-cceeeeCCCCCccccceeeecceeecCCccHHH------HHHHHHHHHhhCC
Q 023053 84 PRAFVYHNFLSKAECEYLIDLAKPYMV-KSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRII------RGIEKRIADFTFI 156 (288)
Q Consensus 84 P~i~vi~nfLs~eEC~~Li~~a~~~l~-~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~------~~I~~ri~~~~~l 156 (288)
...+++.++||++|++.|.+.++..+. ++... .... ....|.+ |-....++.+ .+|...++++.|-
T Consensus 14 ~Gyv~~~~~~s~eei~~L~~~~~~~l~~~~~~~-~~~~---~~~~~~~---~~~~~~~~~~~~l~~~~~l~~~~~~llG~ 86 (288)
T TIGR01762 14 NGFIGPFTLYSPEEMKETWKRIRLRLLDRSAAP-YQDL---GGTNIAN---YDRHLDDDFLASHICRPEICHRVESILGP 86 (288)
T ss_pred CCEEeCcCCCCHHHHHHHHHHHHHHhhcccccc-ccCC---CCceeEe---eeecccCHHHHHHhcCHHHHHHHHHHhCC
Confidence 345789999999999999998764321 11100 0000 0112222 1111112222 2344555566664
Q ss_pred CCCCCCceEEeecCCCCccccCccccccccc--------cCCCCceEEEEEEeecCCC-CCceeee-cCCCcccc---cc
Q 023053 157 PMEHGEGIQVLHYEVGQKYDAHYDYFLDEFN--------TKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFT---SV 223 (288)
Q Consensus 157 p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~--------~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s---~~ 223 (288)
++......-+.+...++.+.||.|...-... ......+.+|+.+.|.|+. +-|.+.| |....... ..
T Consensus 87 ~v~l~~~~~~~K~pg~~~~~wHQD~~y~~~~~~~~~~~p~~~~~~~~vt~wiaLdd~t~eNG~L~viPGSH~~~~~~~~~ 166 (288)
T TIGR01762 87 NVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQLVWPENEEFGGTITVWTAFTDATIENGCMQFIPGTHNSMNYDETR 166 (288)
T ss_pred cEEeeeceeeeeCCCCCCCCCCccCcccccCCcccccccccCCCCCeEEEEEEcccCCcccCCEEEECCCCCCCCCCccc
Confidence 4322222234555555558999996432110 0112247899999999985 4566655 43322100 00
Q ss_pred -----c------------------ccccc------cccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccce-
Q 023053 224 -----R------------------WWNEL------SECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGN- 273 (288)
Q Consensus 224 -----~------------------~~~~~------~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~- 273 (288)
+ .+.++ ..+....+.+.-++|++++|. ..++|++.|-++..
T Consensus 167 ~~~~~p~~~~~~~~g~~~~~~~~~~~~~l~~d~~~~~~~~~~v~~~lkaGd~~~f~---------~~t~HgS~~N~S~~~ 237 (288)
T TIGR01762 167 RMTFEPDANNSVVKGGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPNSGESQ 237 (288)
T ss_pred ccccCccccccccccccccccccccchhhcccccCCccccceeeeeeCCceEEEEC---------CCceecCCCCCCCCc
Confidence 0 00000 001112356777999999996 58999999998853
Q ss_pred -EEEE-EEee
Q 023053 274 -KWSA-TKWM 281 (288)
Q Consensus 274 -K~i~-~~W~ 281 (288)
|+++ ..|+
T Consensus 238 ~R~~~~~ry~ 247 (288)
T TIGR01762 238 MRMGFASRYV 247 (288)
T ss_pred eEEEEEEEEc
Confidence 5554 3344
No 21
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=97.30 E-value=0.0014 Score=57.92 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=62.1
Q ss_pred eEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcc--cccccccccccccCCCCeEEec
Q 023053 164 IQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANAN--FTSVRWWNELSECGKQGLSVKP 241 (288)
Q Consensus 164 lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~--~s~~~~~~~~~~c~~~~~~V~P 241 (288)
.=+.++.+|++-..|.= ....++-.+||+.++.+|...|...... ....+.-..........+.|+|
T Consensus 98 ~W~ni~~~Gg~h~~H~H-----------p~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P 166 (201)
T TIGR02466 98 AWVNILPQGGTHSPHLH-----------PGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPP 166 (201)
T ss_pred EeEEEcCCCCccCceEC-----------CCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEECC
Confidence 33577889998888743 2357999999998888888888543211 1100000000011123567999
Q ss_pred CCCcEEEEecCCCCCCCCCCCccccCCCcc-ceEEEEE
Q 023053 242 KRGDALLFWSMRPDATLDPSSLHGGCPVIR-GNKWSAT 278 (288)
Q Consensus 242 k~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~ 278 (288)
+.|++|+|+| .+.|++.|-.. ++|.++.
T Consensus 167 ~~G~lvlFPS---------~L~H~v~p~~~~~~RISiS 195 (201)
T TIGR02466 167 QEGRVLLFES---------WLRHEVPPNESEEERISVS 195 (201)
T ss_pred CCCeEEEECC---------CCceecCCCCCCCCEEEEE
Confidence 9999999996 78999999875 4676653
No 22
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=96.99 E-value=0.0061 Score=52.53 Aligned_cols=154 Identities=20% Similarity=0.178 Sum_probs=77.1
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCc--CccceeeeCCCCCccc---------------cceeeecc-eeecCC---ccHHHH
Q 023053 86 AFVYHNFLSKAECEYLIDLAKPY--MVKSTVVDSKTGQSKD---------------SRVRTSSG-TFLKRG---QDRIIR 144 (288)
Q Consensus 86 i~vi~nfLs~eEC~~Li~~a~~~--l~~s~v~~~~~g~~~~---------------~~~R~s~~-~~l~~~---~d~v~~ 144 (288)
+++++||||++|.++|++..... +...+... ++... ..++-+.. .+-... -.+.+.
T Consensus 2 ~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~~p~~l~ 78 (194)
T PF13532_consen 2 LYYIPNFLSEEEAAELLNELRESAPFRQPTYPM---GKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPPFPEWLS 78 (194)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCC---CCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSCCHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcC---CCEEccceecceeeEEECCCCCeEcCCccccCCCCCCCccHHHH
Confidence 67999999999999999988632 11111100 11000 00111100 000000 013455
Q ss_pred HHHHHHHHhhC-CCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccc
Q 023053 145 GIEKRIADFTF-IPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSV 223 (288)
Q Consensus 145 ~I~~ri~~~~~-lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~ 223 (288)
.+.+++....+ .+........|..|..|+.-.+|.|.... ..+..++|+-+ |+..+|-......
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~-----~~~~~I~slSL-------G~~~~~~f~~~~~--- 143 (194)
T PF13532_consen 79 RLLERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEY-----GFGPPIASLSL-------GSSRVFRFRNKSD--- 143 (194)
T ss_dssp HHHHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC------CCSEEEEEEE-------ES-EEEEEEECGG---
T ss_pred HHHHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccc-----cCCCcEEEEEE-------ccCceEEEeeccC---
Confidence 55555555443 22233456788899999999999997521 24667888877 5555553221100
Q ss_pred cccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 224 RWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 224 ~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
....+.|.-..|+++++.. ...... |++.|+..+
T Consensus 144 ---------~~~~~~~~L~~gsl~vm~g-----~~r~~~-H~I~~~~~~ 177 (194)
T PF13532_consen 144 ---------DDEPIEVPLPPGSLLVMSG-----EARYDW-HGIPPVKKD 177 (194)
T ss_dssp ---------TS-EEEEEE-TTEEEEEET-----THHHHE-EEE-S-SCE
T ss_pred ---------CCccEEEEcCCCCEEEeCh-----HHhhhe-eEcccccCC
Confidence 0135788999999999963 222334 999999874
No 23
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=96.75 E-value=0.066 Score=47.78 Aligned_cols=160 Identities=17% Similarity=0.190 Sum_probs=93.5
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCCccccceeee-cc--eeecC-------------C-----cc
Q 023053 82 WEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTS-SG--TFLKR-------------G-----QD 140 (288)
Q Consensus 82 ~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~R~s-~~--~~l~~-------------~-----~d 140 (288)
..|.++++++|. .+|.++|++........+......+-+....++|.+ -+ .|+.+ . -.
T Consensus 16 ~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~~P 94 (213)
T PRK15401 16 LAPGAVLLRGFA-LAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPAMP 94 (213)
T ss_pred cCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCCch
Confidence 678899999995 888888877665411111110001101112223321 11 23210 0 01
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCccc
Q 023053 141 RIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANF 220 (288)
Q Consensus 141 ~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~ 220 (288)
+.+..|.++++...+.+....+..-|..|.+|+.-++|.|.-.. ..+.-++++.+ |.+-.|..-..+.
T Consensus 95 ~~l~~L~~~~~~~~~~~~~~p~a~LvN~Y~~G~~mg~H~D~~E~-----~~~~pI~SvSL-------G~~~~F~~~~~~~ 162 (213)
T PRK15401 95 ASFLALAQRAAAAAGFPGFQPDACLINRYAPGAKLSLHQDKDER-----DFRAPIVSVSL-------GLPAVFQFGGLKR 162 (213)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEeccCcCccccccCCCcc-----cCCCCEEEEeC-------CCCeEEEecccCC
Confidence 35788888888887765444567899999999999999996321 12334666665 5555564321100
Q ss_pred ccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 221 TSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 221 s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
.....+|.-.-|++||+-. . ....+|++-++..|
T Consensus 163 ------------~~~~~~l~L~~Gdllvm~G-----~-sr~~~HgVp~~~~~ 196 (213)
T PRK15401 163 ------------SDPLQRILLEHGDVVVWGG-----P-SRLRYHGILPLKAG 196 (213)
T ss_pred ------------CCceEEEEeCCCCEEEECc-----h-HhheeccCCcCCCC
Confidence 0124689999999999942 2 13467999888765
No 24
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=96.45 E-value=0.013 Score=50.35 Aligned_cols=79 Identities=25% Similarity=0.338 Sum_probs=58.3
Q ss_pred ccccCccccccccccCCCCceEEEEEEeecCC-CCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecC
Q 023053 174 KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDV-EEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSM 252 (288)
Q Consensus 174 ~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv-~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~ 252 (288)
....|.|... .+--.++++-|... ++||..++|....+ -.|++|.|..|++|+|-.
T Consensus 86 ~t~~HrD~~~--------~~~~~~~~~t~~~gd~~~g~l~lp~~~~~--------------~~g~~~~~~~GtVl~~~~- 142 (171)
T PF12851_consen 86 CTHSHRDTHN--------MPNGYDVLCTLGRGDYDGGRLELPGLDPN--------------ILGVAFAYQPGTVLIFCA- 142 (171)
T ss_pred CccceecCCC--------CCCCeEEEEecCCccccCceEeccccccc--------------cCCEEEecCCCcEEEEcc-
Confidence 3456777542 22236666666543 78999999973211 258999999999999974
Q ss_pred CCCCCCCCCCccccCCCcc-----ceEEEEEEeee
Q 023053 253 RPDATLDPSSLHGGCPVIR-----GNKWSATKWMH 282 (288)
Q Consensus 253 ~~~g~~D~~~lH~g~PV~~-----G~K~i~~~W~~ 282 (288)
....|+..||.. |+|+.+.-+.|
T Consensus 143 -------~~~~Hgvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 143 -------KRELHGVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred -------cceeeecCcccCCCCCCCeEEEEEEEeE
Confidence 468999999997 99999998876
No 25
>PHA02923 hypothetical protein; Provisional
Probab=94.85 E-value=0.19 Score=46.73 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=67.1
Q ss_pred cHHHHHHHHHHHHhhCCC--CCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCC
Q 023053 140 DRIIRGIEKRIADFTFIP--MEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAAN 217 (288)
Q Consensus 140 d~v~~~I~~ri~~~~~lp--~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~ 217 (288)
+.+...|++.|-+-+-.. +.....+.+..|++|.+ .|. . .......+++||+.+++||++.|+...
T Consensus 43 ~di~~~ir~liy~elk~v~~V~V~n~iT~ikYekgd~--~~l--~--------~~~~~y~LvLyL~~p~~GGt~i~~~~~ 110 (315)
T PHA02923 43 IDISECIREILYKQFKNVRNIEVSSTISFIKYNPFND--TTL--T--------DDNMGYYLVIYLNRPKSGKTLIYPTPE 110 (315)
T ss_pred hHHHHHHHHHHHHhccCcceEEEeceEEEEEEcCCCc--cee--e--------cCceEEEEEEEEeccCCCCeEEEecCC
Confidence 557777777665533221 22234688999999995 111 1 122678899999999999999998743
Q ss_pred cccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEE
Q 023053 218 ANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATK 279 (288)
Q Consensus 218 ~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 279 (288)
. .|.- + +=++| |....|+..-|.+|.|.++-.
T Consensus 111 t-------------------~i~~-~-~DvLF---------dKsl~h~s~~V~~G~K~VAl~ 142 (315)
T PHA02923 111 T-------------------VITS-S-EDIMF---------SKSLNFRFENVKRGYKLVMCS 142 (315)
T ss_pred C-------------------eEee-c-cceee---------ecccccceeeeecCcEEEEEE
Confidence 1 1221 1 23666 478999999999999998766
No 26
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.85 E-value=0.29 Score=42.57 Aligned_cols=103 Identities=20% Similarity=0.241 Sum_probs=70.4
Q ss_pred CceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCC---CCCceeeecCCCcccccccccccccccCCCCeE
Q 023053 162 EGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDV---EEGGETVFPAANANFTSVRWWNELSECGKQGLS 238 (288)
Q Consensus 162 E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv---~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~ 238 (288)
....+++|.+|.+--.|.|-.-+. -=-+-+.|-|+++ +.|||.+.-....... ..+-.
T Consensus 124 pTpLlLqYgpgD~NcLHQDLYGel-------vFPLQvailLsePg~DfTGGEF~lvEQRPR~Q------------Sr~~v 184 (236)
T COG3826 124 PTPLLLQYGPGDYNCLHQDLYGEL-------VFPLQVAILLSEPGTDFTGGEFVLVEQRPRMQ------------SRPTV 184 (236)
T ss_pred CCceeEEecCCccchhhhhhhhce-------eeeeeEEEeccCCCCcccCceEEEEecccccc------------cCCce
Confidence 346789999999999999953210 0124566778986 4899998854432211 13456
Q ss_pred EecCCCcEEEEecC-CC----CCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 239 VKPKRGDALLFWSM-RP----DATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 239 V~Pk~G~allF~n~-~~----~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
|.-.+|++++|--. +| -|.--...-|++.-+.+|+++.+-.=||.
T Consensus 185 vpLrqG~g~vFavr~RPv~gtrG~~r~~lRHGvS~lRSG~R~t~GiIFHD 234 (236)
T COG3826 185 VPLRQGDGVVFAVRDRPVQGTRGWYRVPLRHGVSRLRSGERHTVGIIFHD 234 (236)
T ss_pred eeccCCceEEEEeecCcccCccCccccchhcchhhhhcccceeeEEEeec
Confidence 77899999999531 11 12223456899999999999998877764
No 27
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.29 E-value=0.28 Score=42.37 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=55.0
Q ss_pred EeecCCCEEEEcCCCCHHHHHHHHHHhcCcCccc-eeeeCC----CCCccccceeeecceeecCCccHHHHHHHHHHHHh
Q 023053 79 IVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKS-TVVDSK----TGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADF 153 (288)
Q Consensus 79 ~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s-~v~~~~----~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~ 153 (288)
++...|.+++|+||+++||-..+.+..+..-++- ++..+. -|+...+ ...+...-.+-.+.+...|.++
T Consensus 7 ~V~~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRLqNyGGvvh~------~glipeelP~wLq~~v~kinnl 80 (224)
T KOG3200|consen 7 IVKSAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRLQNYGGVVHK------TGLIPEELPPWLQYYVDKINNL 80 (224)
T ss_pred EecccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhhhhcCCcccc------CCcCccccCHHHHHHHHHhhcc
Confidence 4456788999999999999999888876431110 000000 0111000 0122211123345555555543
Q ss_pred hCCCCCCCCceEEeecCCCCccccCcccc
Q 023053 154 TFIPMEHGEGIQVLHYEVGQKYDAHYDYF 182 (288)
Q Consensus 154 ~~lp~~~~E~lqv~rY~~G~~y~~H~D~~ 182 (288)
.-++ .......|..|.+||.--||.|+.
T Consensus 81 glF~-s~~NHVLVNeY~pgqGImPHtDGP 108 (224)
T KOG3200|consen 81 GLFK-SPANHVLVNEYLPGQGIMPHTDGP 108 (224)
T ss_pred cccC-CCcceeEeecccCCCCcCcCCCCC
Confidence 2222 233467889999999999999974
No 28
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=91.56 E-value=2.3 Score=40.50 Aligned_cols=87 Identities=21% Similarity=0.243 Sum_probs=54.5
Q ss_pred ceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+.. .-.+|+|+. .+|+|+. +++ ||==+... ...
T Consensus 201 ~lRl~~YPp~~~~~~~~g~~aHTD~g------------~lTlL~Q-d~v--~GLQV~~~------------------g~W 247 (341)
T PLN02984 201 VIRVYRYPQCSNEAEAPGMEVHTDSS------------VISILNQ-DEV--GGLEVMKD------------------GEW 247 (341)
T ss_pred eEEEEeCCCCCCcccccCccCccCCC------------ceEEEEe-CCC--CCeeEeeC------------------Cce
Confidence 59999998632 245788864 5788865 333 55333321 146
Q ss_pred eEEecCCCcEEEEe----cCCCCCCCCCCCcccc-CCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFW----SMRPDATLDPSSLHGG-CPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g-~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|.+||-- ..+.||. -..+.|++ .+-....||++.-+++-
T Consensus 248 v~V~p~pgalVVNiGD~Le~wTNg~-~kSt~HRVv~~~~~~~R~Sia~F~~P 298 (341)
T PLN02984 248 FNVKPIANTLVVNLGDMMQVISDDE-YKSVLHRVGKRNKKKERYSICYFVFP 298 (341)
T ss_pred EECCCCCCeEEEECChhhhhhcCCe-eeCCCCccccCCCCCCeEEEEEEecC
Confidence 88999999988862 1122222 25789999 33334579998877654
No 29
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=90.71 E-value=2.7 Score=38.55 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHhhCCCCC--------CCCceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCC
Q 023053 142 IIRGIEKRIADFTFIPME--------HGEGIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEE 207 (288)
Q Consensus 142 v~~~I~~ri~~~~~lp~~--------~~E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~e 207 (288)
+...|.+-++...|++.. ....+++.+|.+- -...+|+|+. .+|+|+. +++
T Consensus 88 l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~q-d~v-- 152 (262)
T PLN03001 88 LAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFG------------AITLLIQ-DDV-- 152 (262)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCC------------eeEEEEe-CCC--
Confidence 445555555555666521 1234789999762 2356788863 5788765 443
Q ss_pred CceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 208 GGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 208 GGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
||==+... ...+.|+|..|..||-- ....+| .-..+.|++.-....+||++..+++-
T Consensus 153 ~GLqV~~~------------------g~Wi~V~p~p~a~vVNiGD~l~~~tng-~~~S~~HRVv~~~~~~R~Sia~F~~p 213 (262)
T PLN03001 153 EGLQLLKD------------------AEWLMVPPISDAILIIIADQTEIITNG-NYKSAQHRAIANANKARLSVATFHDP 213 (262)
T ss_pred CceEEeeC------------------CeEEECCCCCCcEEEEccHHHHHHhCC-ccccccceEEcCCCCCEEEEEEEEcC
Confidence 45333221 13578999999887752 111122 12578999986555679999887653
No 30
>PLN02485 oxidoreductase
Probab=89.00 E-value=3.8 Score=38.67 Aligned_cols=89 Identities=16% Similarity=0.103 Sum_probs=54.7
Q ss_pred ceEEeecCCCC----------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCccccccccccccccc
Q 023053 163 GIQVLHYEVGQ----------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSEC 232 (288)
Q Consensus 163 ~lqv~rY~~G~----------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c 232 (288)
.+++.+|.+.. .-.+|+|+. .+|+|. .|...||-=+....
T Consensus 185 ~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g------------~lTlL~--qd~~~~GLqV~~~~---------------- 234 (329)
T PLN02485 185 VMRIIGYPGVSNLNGPPENDIGCGAHTDYG------------LLTLVN--QDDDITALQVRNLS---------------- 234 (329)
T ss_pred eEEEEeCCCCccccCCcccCcccccccCCC------------eEEEEe--ccCCCCeeeEEcCC----------------
Confidence 48999998632 245688863 577764 34333554343321
Q ss_pred CCCCeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 233 GKQGLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 233 ~~~~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
...+.|+|..|.+||--- ...+| .-..+.|++.+....+||++.-+++-
T Consensus 235 -g~Wi~V~p~pg~~vVNiGD~L~~~TnG-~~~St~HRVv~~~~~~R~Si~~F~~p 287 (329)
T PLN02485 235 -GEWIWAIPIPGTFVCNIGDMLKIWSNG-VYQSTLHRVINNSPKYRVCVAFFYET 287 (329)
T ss_pred -CcEEECCCCCCcEEEEhHHHHHHHHCC-EeeCCCceecCCCCCCeEEEEEEecC
Confidence 135789999998887520 11122 12578999986655579998887664
No 31
>PLN02904 oxidoreductase
Probab=88.52 E-value=5.5 Score=38.18 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=54.4
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. -.-.+|+|+. .+|+|+. |+ ||==+.... ...
T Consensus 209 ~lrl~~YPp~p~~~~~~g~~~HtD~g------------~lTlL~q--d~--~GLQV~~~~-----------------g~W 255 (357)
T PLN02904 209 VMAVNCYPACPEPEIALGMPPHSDFG------------SLTILLQ--SS--QGLQIMDCN-----------------KNW 255 (357)
T ss_pred EEEeeecCCCCCcccccCCcCccCCC------------ceEEEec--CC--CeeeEEeCC-----------------CCE
Confidence 5889999863 1245788863 5888864 53 443333221 136
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|..||--- ...+| .-..++|++-.....+||++.-++.-
T Consensus 256 i~V~p~pgalVVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~p 305 (357)
T PLN02904 256 VCVPYIEGALIVQLGDQVEVMSNG-IYKSVVHRVTVNKDYKRLSFASLHSL 305 (357)
T ss_pred EECCCCCCeEEEEccHHHHHHhCC-eeeccCCcccCCCCCCEEEEEEeecC
Confidence 889999998888521 11122 12578999964445689999887653
No 32
>PF06822 DUF1235: Protein of unknown function (DUF1235); InterPro: IPR009641 This family contains a number of poxviral proteins, which include Vaccinia virus, A37, the function of which is unknown.
Probab=87.70 E-value=4.8 Score=37.05 Aligned_cols=106 Identities=19% Similarity=0.298 Sum_probs=76.9
Q ss_pred cHHHHHHHHHHHHhhCCCCCCCCceEEeecCCCCcccc-CccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCc
Q 023053 140 DRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDA-HYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANA 218 (288)
Q Consensus 140 d~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~-H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~ 218 (288)
..++..|++.+.+ +.-.++.+++..|+.|+-++. +.+ .....++++-|..+..||..++-....
T Consensus 32 ~~i~~EI~kh~~e----~V~~~~~i~i~~f~~~~~~~~~~~~-----------~~~~sr~lvCi~sakkGG~iii~~~~~ 96 (266)
T PF06822_consen 32 KIILSEIEKHINE----PVYVNNLISIQVFDKGQCYKSRIQD-----------NSSLSRILVCIQSAKKGGCIIIRNTIS 96 (266)
T ss_pred HHHHHHHHHhcCC----eEEecCcEEEEEEeCCCceeccccC-----------CCcceeEEEEeeccccCCeEEEeeccc
Confidence 3566777776643 333456899999999988753 322 235788999999999999998865432
Q ss_pred ccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 219 NFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 219 ~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
...-.++|..|.|++-. |....-+.+|.+|.-..++.=+..+
T Consensus 97 ---------------~~kkii~~~~~~aVlLs---------pl~~y~Vs~V~~G~~i~i~l~idIP 138 (266)
T PF06822_consen 97 ---------------NDKKIITPNQNMAVLLS---------PLADYDVSNVTKGSMIIIVLDIDIP 138 (266)
T ss_pred ---------------CCceEEecCCCeEEEec---------chhheEEEEecCCcEEEEEEEeccC
Confidence 13467999999999985 5777888999999877766554443
No 33
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=87.44 E-value=6.6 Score=33.69 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCccc
Q 023053 141 RIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANF 220 (288)
Q Consensus 141 ~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~ 220 (288)
+.+..|.++++..++.+....+..-|..|.+|+.-++|.|.. + .....-++++.+ |...+|-.-....
T Consensus 74 ~~L~~L~~~v~~~~g~~~~~~n~~LvN~Y~~Gd~mg~H~D~~--e---~~~~~pI~SvSL-------G~~r~F~~~~~~~ 141 (169)
T TIGR00568 74 QDLGDLCERVATAAGFPDFQPDACLVNRYAPGATLSLHQDRD--E---PDLRAPLLSVSL-------GLPAIFLIGGLKR 141 (169)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEEeecCCCccccccccc--c---ccCCCCEEEEeC-------CCCEEEEecCCcC
Confidence 678888999998888765556788899999999999999942 1 112334555554 5555554321100
Q ss_pred ccccccccccccCCCCeEEecCCCcEEEEe
Q 023053 221 TSVRWWNELSECGKQGLSVKPKRGDALLFW 250 (288)
Q Consensus 221 s~~~~~~~~~~c~~~~~~V~Pk~G~allF~ 250 (288)
+.....+.-.-|++||+-
T Consensus 142 ------------~~~~~~l~L~sGsllvM~ 159 (169)
T TIGR00568 142 ------------NDPPKRLRLHSGDVVIMG 159 (169)
T ss_pred ------------CCceEEEEeCCCCEEEEC
Confidence 012467899999999995
No 34
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=86.94 E-value=6.2 Score=37.87 Aligned_cols=89 Identities=18% Similarity=0.151 Sum_probs=54.8
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+- -...+|+|+. .+|+|+. +++ ||==+..... +..
T Consensus 196 ~lrl~~YP~~~~~~~~~G~~~HTD~g------------~lTlL~Q-d~v--~GLQV~~~~~----------------~~W 244 (358)
T PLN02515 196 KVVVNYYPKCPQPDLTLGLKRHTDPG------------TITLLLQ-DQV--GGLQATRDGG----------------KTW 244 (358)
T ss_pred eEEEeecCCCCChhhccCCCCCCCCC------------eEEEEec-CCC--CceEEEECCC----------------CeE
Confidence 4788899862 1356788864 5788754 332 4533333211 136
Q ss_pred eEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|.+||-- ....||. -..++|++-....++||++.-+++-
T Consensus 245 i~Vpp~pgalVVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Si~~F~~P 294 (358)
T PLN02515 245 ITVQPVEGAFVVNLGDHGHYLSNGR-FKNADHQAVVNSNCSRLSIATFQNP 294 (358)
T ss_pred EECCCCCCeEEEEccHHHHHHhCCe-eeeecceEECCCCCCEEEEEEEecC
Confidence 78999999877752 1122232 2578999865545689999887654
No 35
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=86.64 E-value=7.2 Score=37.20 Aligned_cols=88 Identities=14% Similarity=0.052 Sum_probs=54.8
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+- -...+|+|+. .+|+|+. |...||==+... ...
T Consensus 204 ~lRl~~YPp~~~~~~~~g~~~HTD~g------------~lTlL~q--d~~v~GLQV~~~------------------g~W 251 (348)
T PLN00417 204 DTRFNMYPPCPRPDKVIGVKPHADGS------------AFTLLLP--DKDVEGLQFLKD------------------GKW 251 (348)
T ss_pred eeeeeecCCCCCcccccCCcCccCCC------------ceEEEEe--cCCCCceeEeEC------------------CeE
Confidence 4899999752 1356788863 5777743 322345333321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|.+||--- ...+| .-..++|++-+...++||++.-+++-
T Consensus 252 i~V~p~pg~lVVNiGD~Le~~Tng-~~kSt~HRVv~~~~~~R~Si~fF~~P 301 (348)
T PLN00417 252 YKAPIVPDTILINVGDQMEIMSNG-IYKSPVHRVVTNREKERISVATFCIP 301 (348)
T ss_pred EECCCCCCcEEEEcChHHHHHhCC-eecccceEEecCCCCCEEEEEEEecC
Confidence 789999999887521 11122 22578999976556789999887764
No 36
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=86.60 E-value=8.9 Score=36.35 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=54.6
Q ss_pred CceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCC
Q 023053 162 EGIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 162 E~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
..+++.+|.+-. ...+|+|+. .+|+|+. |...||==++.. ..
T Consensus 190 ~~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~q--d~~v~GLQV~~~------------------g~ 237 (337)
T PLN02639 190 QHMAVNYYPPCPEPELTYGLPAHTDPN------------ALTILLQ--DQQVAGLQVLKD------------------GK 237 (337)
T ss_pred cEEEEEcCCCCCCcccccCCCCCcCCC------------ceEEEEe--cCCcCceEeecC------------------Ce
Confidence 358899998631 256788853 5777754 322345334321 13
Q ss_pred CeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 236 GLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+.|+|..|.+||--- ...|| .-..+.|++-.....+||++.-+++-
T Consensus 238 Wi~V~p~pg~lVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p 288 (337)
T PLN02639 238 WVAVNPHPGAFVINIGDQLQALSNG-RYKSVWHRAVVNTDKERMSVASFLCP 288 (337)
T ss_pred EEeccCCCCeEEEechhHHHHHhCC-eeeccCcccccCCCCCEEEEEEEecC
Confidence 6889999999888521 11122 12578999954334689999887764
No 37
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=86.00 E-value=7.4 Score=37.35 Aligned_cols=88 Identities=22% Similarity=0.241 Sum_probs=55.4
Q ss_pred ceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+.. .-.+|+|.. .+|+|+. +++ ||==++... ...
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g------------~lTiL~Q-d~v--~GLQV~~~~-----------------~~W 258 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDSS------------LLTILYQ-SNT--SGLQVFREG-----------------VGW 258 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCCC------------cEEEEec-CCC--CCceEECCC-----------------CEE
Confidence 57889998631 356788863 5788875 333 554444321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|.+||--- ...|| .-..+.|++-.-...+||++.-+++-
T Consensus 259 i~V~p~pgalVVNiGD~lq~~SNg-~~kS~~HRVv~~~~~~R~Sia~F~~P 308 (358)
T PLN02254 259 VTVPPVPGSLVVNVGDLLHILSNG-RFPSVLHRAVVNKTRHRISVAYFYGP 308 (358)
T ss_pred EEcccCCCCEEEEhHHHHHHHhCC-eeccccceeecCCCCCEEEEEEEecC
Confidence 889999999888521 11222 23578999954434578988877653
No 38
>PLN02216 protein SRG1
Probab=85.85 E-value=7.5 Score=37.25 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=54.9
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+- -...+|+|+. .+|+|+.-+++ ||==+... ...
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g------------~lTlL~q~~~v--~GLQV~~~------------------g~W 258 (357)
T PLN02216 211 SIRMNYYPPCPQPDQVIGLTPHSDAV------------GLTILLQVNEV--EGLQIKKD------------------GKW 258 (357)
T ss_pred eeEEeecCCCCCcccccCccCcccCc------------eEEEEEecCCC--CceeEEEC------------------CEE
Confidence 5889999763 1356788853 57777654554 45444321 136
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|..||--- ...|| .-..+.|++......+|+++.-+++-
T Consensus 259 i~V~p~pgalvVNiGD~L~~~TNG-~~kS~~HRVv~~~~~~R~Si~~F~~P 308 (357)
T PLN02216 259 VSVKPLPNALVVNVGDILEIITNG-TYRSIEHRGVVNSEKERLSVATFHNT 308 (357)
T ss_pred EECCCCCCeEEEEcchhhHhhcCC-eeeccCceeecCCCCCEEEEEEEecC
Confidence 789999998887521 11222 12578999864445689998877653
No 39
>PLN02276 gibberellin 20-oxidase
Probab=85.60 E-value=9.6 Score=36.53 Aligned_cols=88 Identities=22% Similarity=0.197 Sum_probs=55.7
Q ss_pred CceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCC
Q 023053 162 EGIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 162 E~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
..+++.+|.+.. .-.+|+|+. .+|+|+. | ..||==+... ..
T Consensus 206 ~~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~Q--d-~v~GLQV~~~------------------g~ 252 (361)
T PLN02276 206 SIMRCNYYPPCQEPELTLGTGPHCDPT------------SLTILHQ--D-QVGGLQVFVD------------------NK 252 (361)
T ss_pred ceeeeEeCCCCCCcccccCCccccCCc------------eeEEEEe--c-CCCceEEEEC------------------CE
Confidence 458899997641 245788863 5788764 3 3355444421 13
Q ss_pred CeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 236 GLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+.|+|..|.+||--- ...+| .-..++|++......+||++.-+++-
T Consensus 253 Wi~V~p~pgalVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~P 303 (361)
T PLN02276 253 WRSVRPRPGALVVNIGDTFMALSNG-RYKSCLHRAVVNSERERRSLAFFLCP 303 (361)
T ss_pred EEEcCCCCCeEEEEcHHHHHHHhCC-ccccccceeecCCCCCEEEEEEEecC
Confidence 6889999999988631 11222 22578999854445689998877763
No 40
>PLN02947 oxidoreductase
Probab=85.23 E-value=9.4 Score=36.88 Aligned_cols=87 Identities=21% Similarity=0.193 Sum_probs=54.3
Q ss_pred ceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+.. ...+|+|+. .+|+|+. +++ ||==+... ...
T Consensus 226 ~lrln~YPp~p~~~~~~G~~~HTD~g------------~lTlL~Q-d~v--~GLQV~~~------------------g~W 272 (374)
T PLN02947 226 MMVVNCYPACPEPELTLGMPPHSDYG------------FLTLLLQ-DEV--EGLQIMHA------------------GRW 272 (374)
T ss_pred eeeeecCCCCCCcccccCCCCccCCC------------ceEEEEe-cCC--CCeeEeEC------------------CEE
Confidence 57788898632 356788853 6888876 443 55444432 135
Q ss_pred eEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|.+||-- ....||. -..++|++-......||++..++.-
T Consensus 273 i~V~p~pga~VVNvGD~Lq~~SNG~-~kS~~HRVv~~~~~~R~Sia~F~~P 322 (374)
T PLN02947 273 VTVEPIPGSFVVNVGDHLEIFSNGR-YKSVLHRVRVNSTKPRISVASLHSL 322 (374)
T ss_pred EeCCCCCCeEEEEeCceeeeeeCCE-EeccccccccCCCCCEEEEEEEecC
Confidence 78899988777642 1112222 2578999965445679998877654
No 41
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=85.01 E-value=10 Score=36.09 Aligned_cols=90 Identities=18% Similarity=0.123 Sum_probs=55.3
Q ss_pred CceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCC
Q 023053 162 EGIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 162 E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
..+++.+|.+- -...+|+|+. .+|+|+- | ..||==++.... ..
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d-~v~GLQV~~~~~----------------g~ 241 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDGG------------ALTVLAQ--D-DVGGLQISRRSD----------------GE 241 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCCC------------eEEEEec--C-CCCceEEeecCC----------------Ce
Confidence 45889999863 1356788863 5777743 3 235543433111 13
Q ss_pred CeEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 236 GLSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 236 ~~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+.|+|..|..||-- ....|| .-..++|++......+||++.-+++-
T Consensus 242 Wi~V~p~pg~~vVNiGD~L~~~Tng-~~~St~HRVv~~~~~~R~Si~~F~~P 292 (345)
T PLN02750 242 WIPVKPIPDAFIINIGNCMQVWTND-LYWSAEHRVVVNSQKERFSIPFFFFP 292 (345)
T ss_pred EEEccCCCCeEEEEhHHHHHHHhCC-eeecccceeccCCCCCEEEEEEeecC
Confidence 578999999887741 011222 12578999975545679998877654
No 42
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=85.00 E-value=10 Score=36.16 Aligned_cols=88 Identities=18% Similarity=0.185 Sum_probs=55.1
Q ss_pred CceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCC
Q 023053 162 EGIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 162 E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
..+++.+|.+- -.-.+|+|+. .+|+|+. | ..||==++.. ..
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~g------------~lTlL~Q--d-~v~GLQV~~~------------------g~ 243 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDAN------------LITVLLQ--D-EVSGLQVFKD------------------GK 243 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCCC------------ceEEEEE--C-CCCceEEEEC------------------Cc
Confidence 35889999862 1356788864 5788754 3 2355444421 14
Q ss_pred CeEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 236 GLSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 236 ~~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+.|+|..|..||-- ....|| .-..+.|++-....++||++.-+++-
T Consensus 244 Wi~V~p~pgalvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p 294 (348)
T PLN02912 244 WIAVNPIPNTFIVNLGDQMQVISND-KYKSVLHRAVVNTDKERISIPTFYCP 294 (348)
T ss_pred EEECCCcCCeEEEEcCHHHHHHhCC-EEEcccccccCCCCCCEEEEEEEecC
Confidence 688999999888752 111122 12578999854445689999887764
No 43
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=84.93 E-value=6.9 Score=36.49 Aligned_cols=109 Identities=15% Similarity=0.117 Sum_probs=62.7
Q ss_pred HHHHHHHHHHhhCC-CCC----CCCceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCcee
Q 023053 143 IRGIEKRIADFTFI-PME----HGEGIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGET 211 (288)
Q Consensus 143 ~~~I~~ri~~~~~l-p~~----~~E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT 211 (288)
...|.+-++...|+ +.. ....+++++|.+- -.-.+|+|+. .+|+|+. |...||==
T Consensus 125 ~~~ll~~la~~Lgl~~~~~f~~~~~~lr~~~YP~~p~~~~~~g~~~HtD~g------------~lTlL~q--d~~~~GLq 190 (300)
T PLN02365 125 AMDLARKLAESLGLVEGDFFQGWPSQFRINKYNFTPETVGSSGVQIHTDSG------------FLTILQD--DENVGGLE 190 (300)
T ss_pred HHHHHHHHHHHcCCCChHHHhhcccceeeeecCCCCCccccccccCccCCC------------ceEEEec--CCCcCceE
Confidence 33444444445677 432 1246889999542 1245687753 4788754 32234533
Q ss_pred eecCCCcccccccccccccccCCCCeEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 212 VFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 212 ~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
+..... ...+.|.|..|.+||-- ....|| .-..+.|++...-..+||++.-++.
T Consensus 191 V~~~~~----------------g~Wi~V~p~pga~vVNiGD~l~~~TNG-~~~St~HRVv~~~~~~R~Si~~F~~ 248 (300)
T PLN02365 191 VMDPSS----------------GEFVPVDPLPGTLLVNLGDVATAWSNG-RLCNVKHRVQCKEATMRISIASFLL 248 (300)
T ss_pred EEECCC----------------CeEEecCCCCCeEEEEhhHHHHHHhCC-ceecccceeEcCCCCCEEEEEEEec
Confidence 333211 13578999999988852 111222 2257899997654557999887764
No 44
>KOG3959 consensus 2-Oxoglutarate- and iron-dependent dioxygenase-related proteins [General function prediction only]
Probab=84.81 E-value=1.2 Score=40.36 Aligned_cols=93 Identities=23% Similarity=0.397 Sum_probs=54.9
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCc-Cccce--eeeCCCCCcc---ccceeeecceeecCCccHHHHHHHHHHHHhhCC
Q 023053 83 EPRAFVYHNFLSKAECEYLIDLAKPY-MVKST--VVDSKTGQSK---DSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFI 156 (288)
Q Consensus 83 ~P~i~vi~nfLs~eEC~~Li~~a~~~-l~~s~--v~~~~~g~~~---~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~~l 156 (288)
-|.+.+++||||.+|=..|++..... +..|. -....-|... .++.|+.. |.. -....+.+.+|+.++.++
T Consensus 71 ~pG~~lie~Fls~~Eea~l~~~~D~~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~--F~G--~P~~~~~v~rrm~~yp~l 146 (306)
T KOG3959|consen 71 IPGLTLIENFLSESEEAKLLNMIDTVPWAQSQSGRRKQDYGPKVNFKKKKLKTDT--FVG--MPEYADMVLRRMSEYPVL 146 (306)
T ss_pred cCCeeehhhhhccchHhHHHHHhccCchhhhcccccccccCCccchhhhhhccCc--ccC--CchHHHHHHHHhhccchh
Confidence 48899999999999999999998653 11111 1000112221 22344433 322 245677777888876533
Q ss_pred ----CCCCCCceEEeecC--CCCccccCccccc
Q 023053 157 ----PMEHGEGIQVLHYE--VGQKYDAHYDYFL 183 (288)
Q Consensus 157 ----p~~~~E~lqv~rY~--~G~~y~~H~D~~~ 183 (288)
|.+.. =+.|+ .|.--.||.|..+
T Consensus 147 ~gfqp~EqC----nLeYep~kgsaIdpH~DD~W 175 (306)
T KOG3959|consen 147 KGFQPFEQC----NLEYEPVKGSAIDPHQDDMW 175 (306)
T ss_pred hccCcHHHc----CcccccccCCccCccccchh
Confidence 32211 24476 4888999999754
No 45
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.38 E-value=4.1 Score=38.03 Aligned_cols=99 Identities=20% Similarity=0.255 Sum_probs=59.6
Q ss_pred ccccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCccccccccccccc-ccCCCCeEEecCCCcEEEEe
Q 023053 174 KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFTSVRWWNELS-ECGKQGLSVKPKRGDALLFW 250 (288)
Q Consensus 174 ~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s~~~~~~~~~-~c~~~~~~V~Pk~G~allF~ 250 (288)
.=.+|.|+... ..+..-...+.+=|-|.. +-|.|.+ |... ..+..+.|.+.+ --....+.|.-.+|++|+|.
T Consensus 132 ~t~~HqD~~~~----~~~~~~lV~~wiAl~d~~~dnGat~vvPgSH-~~~~~~~r~d~~~y~~~~~~pv~lekGDallF~ 206 (299)
T COG5285 132 ATRWHQDYPLV----SPGYPALVNAWIALCDFTEDNGATLVVPGSH-KWDVIPERPDHETYLERNAVPVELEKGDALLFN 206 (299)
T ss_pred ccccccccccc----cCCccceEEEEEeccccccccCceEEEeccc-ccccCCCCCCccchhhhcceeeeecCCCEEEEc
Confidence 45789996543 234445677888888874 5677765 5432 111112222221 00123677888999999994
Q ss_pred cCCCCCCCCCCCccccCCCccceEEEEEEeeeeccc
Q 023053 251 SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 286 (288)
Q Consensus 251 n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~ 286 (288)
+.++|++---+.+-+-.+........|
T Consensus 207 ---------~~L~HaA~aNrT~~~R~A~~~~~~~~~ 233 (299)
T COG5285 207 ---------GSLWHAAGANRTSADRVALTLQFTVSF 233 (299)
T ss_pred ---------chhhhhhhcCCCCcccceEEEEEeecc
Confidence 799999988888855555444443333
No 46
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=83.97 E-value=13 Score=35.55 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=53.3
Q ss_pred ceEEeecCCC----C--ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG----Q--KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G----~--~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. . .-.+|+|+. .+|+|+. +++..||==++.. ...
T Consensus 212 ~lR~~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~q-d~~~v~GLQV~~~------------------g~W 260 (361)
T PLN02758 212 AVRMNYYPPCSRPDLVLGLSPHSDGS------------ALTVLQQ-GKGSCVGLQILKD------------------NTW 260 (361)
T ss_pred eeeeecCCCCCCcccccCccCccCCc------------eeEEEEe-CCCCCCCeeeeeC------------------CEE
Confidence 5788899752 1 246788863 5788753 2223355333321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
+.|+|..|..||--- ...|| .-..+.|++......+||++.-+++
T Consensus 261 i~V~p~pgalVVNiGD~L~~~SNG-~~kS~~HRVv~~~~~~R~Sia~F~~ 309 (361)
T PLN02758 261 VPVHPVPNALVINIGDTLEVLTNG-KYKSVEHRAVTNKEKDRLSIVTFYA 309 (361)
T ss_pred EeCCCCCCeEEEEccchhhhhcCC-eeecccceeecCCCCCEEEEEEEec
Confidence 789999998887521 11222 1257899997554557998887765
No 47
>PLN02997 flavonol synthase
Probab=83.67 E-value=6.6 Score=37.15 Aligned_cols=88 Identities=16% Similarity=0.076 Sum_probs=55.5
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+- -...+|+|+. .+|+|+. ++ .||==+... ...
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~Q-d~--v~GLQV~~~------------------g~W 230 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDMG------------AIALLIP-NE--VPGLQAFKD------------------EQW 230 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCCC------------ceEEEec-CC--CCCEEEeEC------------------CcE
Confidence 4889999863 2356788863 5788854 33 355444432 136
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|+|..|.+||--- ...|| .-..++|++..-....||++.-+++-+
T Consensus 231 i~V~p~pgalvVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~fF~~P~ 281 (325)
T PLN02997 231 LDLNYINSAVVVIIGDQLMRMTNG-RFKNVLHRAKTDKERLRISWPVFVAPR 281 (325)
T ss_pred EECCCCCCeEEEEechHHHHHhCC-ccccccceeeCCCCCCEEEEEEEecCC
Confidence 789999998887521 11222 235789999754455799988776543
No 48
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=82.92 E-value=12 Score=35.23 Aligned_cols=88 Identities=20% Similarity=0.232 Sum_probs=54.7
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+- ....+|+|+. .+|+|+ .|...||==+... ...
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g------------~lTlL~--qd~~v~GLQV~~~------------------g~W 206 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAG------------GIILLF--QDDKVSGLQLLKD------------------GEW 206 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCC------------eEEEEE--ecCCCCCcCcccC------------------CeE
Confidence 4789999852 1355888864 577774 3322344333321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|+|..|.+||--- ...+|. -..+.|++.....++||++.-+++-
T Consensus 207 i~V~p~pg~lvVNiGD~l~~~Tng~-~kS~~HRVv~~~~~~R~Si~~F~~p 256 (321)
T PLN02299 207 VDVPPMRHSIVVNLGDQLEVITNGK-YKSVMHRVVAQTDGNRMSIASFYNP 256 (321)
T ss_pred EECCCCCCeEEEEeCHHHHHHhCCc-eecccceeecCCCCCEEEEEEEecC
Confidence 789999988887521 122222 2578999975556789999887764
No 49
>PTZ00273 oxidase reductase; Provisional
Probab=82.39 E-value=20 Score=33.62 Aligned_cols=88 Identities=22% Similarity=0.219 Sum_probs=53.6
Q ss_pred ceEEeecCCCC-------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCC
Q 023053 163 GIQVLHYEVGQ-------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 163 ~lqv~rY~~G~-------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
.+++.+|.+.. .-.+|+|+. .+|+|.. |. .||==++... ..
T Consensus 178 ~lrl~~YP~~~~~~~~~~g~~~HTD~g------------~lTlL~q--d~-~~GLqV~~~~-----------------g~ 225 (320)
T PTZ00273 178 VFRMKHYPALPQTKKGRTVCGEHTDYG------------IITLLYQ--DS-VGGLQVRNLS-----------------GE 225 (320)
T ss_pred eeeeeecCCCCCccccCcccccccCCC------------eEEEEec--CC-CCceEEECCC-----------------CC
Confidence 48899997631 235688853 5788753 42 3553334321 13
Q ss_pred CeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 236 GLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
.+.|+|..|.+||--- ...+| .-..++|++... ..+||++.-+++-+
T Consensus 226 Wi~V~p~pg~lvVNvGD~l~~~TnG-~~kSt~HRVv~~-~~~R~Si~~F~~p~ 276 (320)
T PTZ00273 226 WMDVPPLEGSFVVNIGDMMEMWSNG-RYRSTPHRVVNT-GVERYSMPFFCEPN 276 (320)
T ss_pred EEeCCCCCCeEEEEHHHHHHHHHCC-eeeCCCccccCC-CCCeEEEEEEEcCC
Confidence 5789999999887521 11222 125789999744 45799988776643
No 50
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=81.47 E-value=19 Score=34.19 Aligned_cols=88 Identities=15% Similarity=0.175 Sum_probs=55.7
Q ss_pred ceEEeecCCCC--------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCC
Q 023053 163 GIQVLHYEVGQ--------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGK 234 (288)
Q Consensus 163 ~lqv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~ 234 (288)
.+++.+|.+.. .-.+|+|+. .+|+|+. ++ .||==+.... .
T Consensus 179 ~lRl~~YP~~~~~~~~~~~g~~~HTD~g------------~lTlL~Q-d~--v~GLQV~~~~-----------------g 226 (335)
T PLN02156 179 CLRMNHYPEKEETPEKVEIGFGEHTDPQ------------LISLLRS-ND--TAGLQICVKD-----------------G 226 (335)
T ss_pred eEeEEeCCCCCCCccccccCCCCccCCC------------ceEEEEe-CC--CCceEEEeCC-----------------C
Confidence 58899997632 235688853 5788855 33 3553333221 1
Q ss_pred CCeEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 235 QGLSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
..+.|.|..|.+||-- ....||. -..+.|++......+||++.-+++-
T Consensus 227 ~Wi~Vpp~pga~VVNiGD~l~~wTNg~-~kSt~HRVv~~~~~~R~SiafF~~P 278 (335)
T PLN02156 227 TWVDVPPDHSSFFVLVGDTLQVMTNGR-FKSVKHRVVTNTKRSRISMIYFAGP 278 (335)
T ss_pred CEEEccCCCCcEEEEhHHHHHHHhCCe-eeccceeeecCCCCCEEEEEEeecC
Confidence 4688999999988852 1122222 2578999986656689998877653
No 51
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=79.26 E-value=4.7 Score=35.29 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=52.9
Q ss_pred cHHHHHHHHHHHHhhCCCCCCCCc----eEEeecCC--CC-----ccccCccccccccccCCCCceEEEEEEeecCCCCC
Q 023053 140 DRIIRGIEKRIADFTFIPMEHGEG----IQVLHYEV--GQ-----KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEG 208 (288)
Q Consensus 140 d~v~~~I~~ri~~~~~lp~~~~E~----lqv~rY~~--G~-----~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eG 208 (288)
+++++.|-....++++......++ ++-.|+.. +. -=+.|.|+. .-..+.++--+++ +|
T Consensus 70 ~~~~~~ll~~~~~~~~~~~~~~~~~~i~vHq~Ri~a~~~~~g~ptPEGiH~DG~----------d~v~~~li~r~Ni-~G 138 (195)
T PF10014_consen 70 NPVLQALLRFDAEIFGWDEDSSEPWHIGVHQIRIIATPDEPGEPTPEGIHRDGV----------DFVFIHLINRHNI-EG 138 (195)
T ss_dssp SHHHHHHHHHHHHHHHCCS-GGGEEEEEEEEEEEETTTS--B--STTSSB--SS----------SEEEEEEEEEESE-EE
T ss_pred CHHHHHHHHHHHHHhcccccCCCCEEEEEEEEEEEEecCccCCcCCCCccCCCC----------CEEEEEEEcCCCc-cC
Confidence 456677766666666554312223 33345442 22 124566643 4567777777777 69
Q ss_pred ceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc
Q 023053 209 GETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR 271 (288)
Q Consensus 209 GeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~ 271 (288)
|+|.......+ .....---+.|+.+++- |...+|.+.||..
T Consensus 139 G~s~i~~~~~~--------------~~~~~~l~~p~d~l~~~--------D~~~~H~vtpI~~ 179 (195)
T PF10014_consen 139 GESQIYDNDKE--------------ILFFFTLLEPGDTLLVD--------DRRVWHYVTPIRP 179 (195)
T ss_dssp --EEEEETTSS--------------EEEEE---STTEEEEEE--------TTTEEEEE--EEE
T ss_pred ceEEEEeCCCC--------------cceEEEecCCCCEEEEe--------CCcceECCCceec
Confidence 99887543211 01223345789999996 7899999999974
No 52
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=78.63 E-value=22 Score=33.66 Aligned_cols=88 Identities=22% Similarity=0.214 Sum_probs=57.4
Q ss_pred ceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
-+++.+|.+.- ...+|.|.. .+|+|+.=|+| ||--+|.. . ...
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~------------~lTiLlqd~~V--~GLQv~~~-d----------------g~W 225 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS------------FLTILLQDDDV--GGLQVFTK-D----------------GKW 225 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC------------ceEEEEccCCc--CceEEEec-C----------------CeE
Confidence 68889998642 467888853 46777554444 67777751 1 246
Q ss_pred eEEecCCCcEEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 237 LSVKPKRGDALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 237 ~~V~Pk~G~allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
+.|+|..|..+|=- ....|| .-...+|++..-...+|+++-.++.
T Consensus 226 i~V~P~p~a~vVNiGD~l~~lSNG-~ykSv~HRV~~n~~~~R~Sia~F~~ 274 (322)
T KOG0143|consen 226 IDVPPIPGAFVVNIGDMLQILSNG-RYKSVLHRVVVNGEKERISVAFFVF 274 (322)
T ss_pred EECCCCCCCEEEEcccHHhHhhCC-cccceEEEEEeCCCCceEEEEEEec
Confidence 89999997666531 011223 2357899999988778887766543
No 53
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=77.79 E-value=27 Score=33.45 Aligned_cols=89 Identities=18% Similarity=0.062 Sum_probs=53.1
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. -.-.+|+|+. .+|+|+. |...||==+... ...
T Consensus 214 ~lRl~~YP~~p~~~~~~g~~~HtD~g------------~lTlL~q--~~~v~GLQV~~~------------------g~W 261 (362)
T PLN02393 214 CLRVNYYPKCPQPDLTLGLSPHSDPG------------GMTILLP--DDNVAGLQVRRD------------------DAW 261 (362)
T ss_pred eeeeeecCCCCCcccccccccccCCc------------eEEEEee--CCCCCcceeeEC------------------CEE
Confidence 5788899642 1356888864 4677654 222345434321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|.|..|.+||--- ...+|. -..++|++......+||++.-+++-+
T Consensus 262 ~~V~p~pgalVVNiGD~l~~~Tng~-~kSt~HRVv~~~~~~R~SiafF~~P~ 312 (362)
T PLN02393 262 ITVKPVPDAFIVNIGDQIQVLSNAI-YKSVEHRVIVNSAKERVSLAFFYNPK 312 (362)
T ss_pred EECCCCCCeEEEEcchhhHhhcCCe-eeccceecccCCCCCEEEEEEEecCC
Confidence 789999988887521 111221 25689999544345799998877643
No 54
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=76.65 E-value=21 Score=33.73 Aligned_cols=89 Identities=24% Similarity=0.297 Sum_probs=60.2
Q ss_pred CCceEEeecCC------CCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCC
Q 023053 161 GEGIQVLHYEV------GQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGK 234 (288)
Q Consensus 161 ~E~lqv~rY~~------G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~ 234 (288)
++.++++||.. ++.-+.|.|+. .+|+| +-| ..||--+.+...
T Consensus 173 ~~~~RLlrYP~~~~~~~~~~~GaHtD~G------------~lTLl--~Qd-~~~GLqv~~~~g----------------- 220 (322)
T COG3491 173 NSVLRLLRYPSRPAREGADGVGAHTDYG------------LLTLL--FQD-DVGGLEVRPPNG----------------- 220 (322)
T ss_pred hheEEEEecCCCcccccccccccccCCC------------eEEEE--Eec-ccCCeEEecCCC-----------------
Confidence 56799999983 34557898864 34554 333 347777777642
Q ss_pred CCeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 235 QGLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
+.+.|.|..|..+|..- ...+| .-..+.|+++--..=+||++--++.
T Consensus 221 ~Wl~v~P~pgtlvVNiGdmLe~~Tng-~lrST~HRV~~~~~~~R~SipfF~~ 271 (322)
T COG3491 221 GWLDVPPIPGTLVVNIGDMLERWTNG-RLRSTVHRVRNPPGVDRYSIPFFLE 271 (322)
T ss_pred CeeECCCCCCeEEEeHHHHHHHHhCC-eeccccceeecCCCccceeeeeecc
Confidence 46899999999999742 11222 2357899998875438898876554
No 55
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=76.28 E-value=18 Score=33.92 Aligned_cols=88 Identities=18% Similarity=0.187 Sum_probs=51.9
Q ss_pred ceEEeecCCC----C--ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG----Q--KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G----~--~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+- . ...+|+|+. .+|+|+.=+++ || +..... ...
T Consensus 154 ~lrl~~YP~~~~~~~~~G~~~HtD~g------------~lTlL~q~~~v--~G-LqV~~~-----------------g~W 201 (303)
T PLN02403 154 GTKVAKYPECPRPELVRGLREHTDAG------------GIILLLQDDQV--PG-LEFLKD-----------------GKW 201 (303)
T ss_pred eeeeEcCCCCCCcccccCccCccCCC------------eEEEEEecCCC--Cc-eEeccC-----------------CeE
Confidence 3789999752 1 245888864 46666533222 44 443221 135
Q ss_pred eEEecCCCc-EEEEe----cCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 237 LSVKPKRGD-ALLFW----SMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 237 ~~V~Pk~G~-allF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
+.|.|..|+ .||-- ....+| .-..+.|++-....++||++.-+++-
T Consensus 202 i~V~p~p~~~lvVNvGD~L~~~Tng-~~~S~~HRVv~~~~~~R~Si~~F~~p 252 (303)
T PLN02403 202 VPIPPSKNNTIFVNTGDQLEVLSNG-RYKSTLHRVMADKNGSRLSIATFYNP 252 (303)
T ss_pred EECCCCCCCEEEEEehHHHHHHhCC-eeecccceeecCCCCCEEEEEEEEcC
Confidence 789999864 44431 011222 22578999976666789999887764
No 56
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=76.04 E-value=37 Score=29.89 Aligned_cols=85 Identities=19% Similarity=0.251 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccc
Q 023053 142 IIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFT 221 (288)
Q Consensus 142 v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s 221 (288)
..-.+...+....|.+....|..-+..|.+|..-.+|.|.-.. ....-++++-+ |....|-.-....
T Consensus 86 ~l~~~~~~~~~~~g~~~~~~ea~Lvn~Y~pGd~ig~HqD~~e~-----~~~~~v~slSL-------g~~~~F~~~~~~r- 152 (194)
T COG3145 86 PLLALFHDLFGAAGYPFEGPEAVLVNRYRPGASIGWHQDKDEE-----DDRPPVASLSL-------GAPCIFRLRGRRR- 152 (194)
T ss_pred ccHHHHHHHHHHhcCCCCChhheeEEeccCCCccccccccccc-----cCCCceEEEec-------CCCeEEEeccccC-
Confidence 3445555666678888777788999999999999999996431 11122455554 3333443211100
Q ss_pred cccccccccccCCCCeEEecCCCcEEEEe
Q 023053 222 SVRWWNELSECGKQGLSVKPKRGDALLFW 250 (288)
Q Consensus 222 ~~~~~~~~~~c~~~~~~V~Pk~G~allF~ 250 (288)
.+...++.-..|++|++-
T Consensus 153 -----------~~~~~~~~L~~Gdvvvm~ 170 (194)
T COG3145 153 -----------RGPGLRLRLEHGDVVVMG 170 (194)
T ss_pred -----------CCCceeEEecCCCEEEec
Confidence 124678999999999995
No 57
>PLN02704 flavonol synthase
Probab=75.40 E-value=12 Score=35.51 Aligned_cols=88 Identities=17% Similarity=0.115 Sum_probs=53.7
Q ss_pred ceEEeecCCCC------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVGQ------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
-+++.+|.+.. ...+|+|+. .+|+|+. ++ .||==+... ...
T Consensus 200 ~lrl~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~q-d~--v~GLQV~~~------------------g~W 246 (335)
T PLN02704 200 LLKINYYPPCPRPDLALGVVAHTDMS------------AITILVP-NE--VQGLQVFRD------------------DHW 246 (335)
T ss_pred hhhhhcCCCCCCcccccCccCccCCc------------ceEEEec-CC--CCceeEeEC------------------CEE
Confidence 36778897621 246788864 5777765 33 344333321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|+|..|.+||--- ...|| .-..++|++......+||++.-+++-+
T Consensus 247 i~V~p~pg~lvVNvGD~L~~~TNg-~~kSt~HRVv~~~~~~R~Si~~F~~p~ 297 (335)
T PLN02704 247 FDVKYIPNALVIHIGDQIEILSNG-KYKSVLHRTTVNKEKTRMSWPVFLEPP 297 (335)
T ss_pred EeCCCCCCeEEEEechHHHHHhCC-eeecccceeecCCCCCeEEEEEEecCC
Confidence 789999998777521 11122 125789999654455799998877643
No 58
>PF14033 DUF4246: Protein of unknown function (DUF4246)
Probab=73.47 E-value=12 Score=37.65 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=57.6
Q ss_pred ccCccccccccccCCCCceEEEEEEeecCCC-CCceeeecCCCc-cc-------c--ccccccc---c---cccCCCCeE
Q 023053 176 DAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVFPAANA-NF-------T--SVRWWNE---L---SECGKQGLS 238 (288)
Q Consensus 176 ~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~Fp~~~~-~~-------s--~~~~~~~---~---~~c~~~~~~ 238 (288)
.||+++..+ .+-.+|.|.|+...- ....+.|-.... .. . +..++.. + ..|-+.-=+
T Consensus 364 ~WHvEG~lN-------E~IvATalYyyd~eNIT~s~L~FR~~~~d~~~~~~~~~~q~~~~~~~~~~g~~~~~~~~q~~Gs 436 (501)
T PF14033_consen 364 SWHVEGQLN-------EHIVATALYYYDSENITESRLSFRQQTDDPDLDQELSYEQDDHEWLERVFGIEDGGPAVQELGS 436 (501)
T ss_pred CccccCCcc-------cceeEEEEEEEecCccCCCceEeeeeccCccccccccccccchhHHHHhcCCCCCccceEEcCc
Confidence 799998653 456799999986421 334666644331 10 0 0111111 1 112111125
Q ss_pred EecCCCcEEEEecCCCCCCCCCCCccccCCC------ccceEEEEEEeeeecccc
Q 023053 239 VKPKRGDALLFWSMRPDATLDPSSLHGGCPV------IRGNKWSATKWMHVHEYK 287 (288)
Q Consensus 239 V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV------~~G~K~i~~~W~~~~~~~ 287 (288)
|.-+.|++|+|+| ..-|++.|. ..|.+-+++.|+=.+.++
T Consensus 437 v~~~~gr~i~fPN---------~~qhrv~~f~L~D~tkpGhrkil~lfLvDP~~~ 482 (501)
T PF14033_consen 437 VETKEGRLIAFPN---------TLQHRVSPFELADPTKPGHRKILALFLVDPHIR 482 (501)
T ss_pred EEccCCcEEeccc---------hhhhccCCccccCCCCCCcEEEEEEEecCCCCc
Confidence 8889999999999 456777754 468888999888766654
No 59
>PHA02985 hypothetical protein; Provisional
Probab=73.15 E-value=34 Score=31.48 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=73.8
Q ss_pred cHHHHHHHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcc
Q 023053 140 DRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANAN 219 (288)
Q Consensus 140 d~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~ 219 (288)
..+.+.|++++.+- .-..+.+++..|+.|+.|.. .+ ..+...+++-+..+..||..+-..-..
T Consensus 39 ~~I~~EI~~~i~E~----V~~~n~i~i~~f~~~~~~~~-~~-----------~~~~SkilICiqsAkkGG~iIi~~~~~- 101 (271)
T PHA02985 39 KIILDEIEQYIDET----VLVKNLISIEVFNKKKKYYQ-NI-----------PSRLSKIIICIQSAKKGGCIIIINNIT- 101 (271)
T ss_pred hHHHHHHHHhcCCe----EEecceeEEEEEcCCcceEe-eC-----------CCCceeEEEEEeecccCCEEEEecccc-
Confidence 45777777777432 22356799999998866422 12 236788999999999999998744211
Q ss_pred cccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 220 FTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 220 ~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
...-.+.|..|.|++-. |.+-..+.+|.+|.--++..=+..+
T Consensus 102 --------------~~K~ii~~~~n~aVlLS---------PLs~Y~Vs~V~kGsli~i~l~idIP 143 (271)
T PHA02985 102 --------------NNKKIITLNINHIIILS---------PLSKYTVSKVSKGSLIIIVLDIDIP 143 (271)
T ss_pred --------------cCceEEecCCCeEEEec---------chhhceEEEecCCcEEEEEEEecCC
Confidence 12457999999999985 5778889999999876666544443
No 60
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=72.43 E-value=38 Score=32.06 Aligned_cols=91 Identities=20% Similarity=0.197 Sum_probs=54.0
Q ss_pred ceEEeecCCCC-------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCC
Q 023053 163 GIQVLHYEVGQ-------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ 235 (288)
Q Consensus 163 ~lqv~rY~~G~-------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~ 235 (288)
.+++.+|.+.. ...+|+|+. .+|+|+- ++ .||==+..... .++..
T Consensus 183 ~lrl~~YP~~~~~~~~~~g~~~HTD~g------------~lTlL~q-d~--v~GLQV~~~~~-------------~~~g~ 234 (332)
T PLN03002 183 TMRLLRYQGISDPSKGIYACGAHSDFG------------MMTLLAT-DG--VMGLQICKDKN-------------AMPQK 234 (332)
T ss_pred heeeeeCCCCCCcccCccccccccCCC------------eEEEEee-CC--CCceEEecCCC-------------CCCCc
Confidence 47899998631 246788853 6788853 33 35544443210 01124
Q ss_pred CeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 236 GLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
.+.|.|..|..||--- ...+| .-..++|++..- ..+||++.-+++-
T Consensus 235 Wi~Vpp~pg~~VVNiGD~L~~wTng-~~kSt~HRVv~~-~~~R~Sia~F~~p 284 (332)
T PLN03002 235 WEYVPPIKGAFIVNLGDMLERWSNG-FFKSTLHRVLGN-GQERYSIPFFVEP 284 (332)
T ss_pred EEECCCCCCeEEEEHHHHHHHHhCC-eeECcCCeecCC-CCCeeEEEEEecC
Confidence 6789999999888521 11122 125789999633 4578988877653
No 61
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=70.64 E-value=37 Score=32.50 Aligned_cols=88 Identities=15% Similarity=0.070 Sum_probs=53.9
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. -.-.+|+|+. .+|+|+. ++ .||==+... ...
T Consensus 212 ~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~q-d~--v~GLQV~~~------------------g~W 258 (360)
T PLN03178 212 QMKINYYPRCPQPDLALGVEAHTDVS------------ALTFILH-NM--VPGLQVLYE------------------GKW 258 (360)
T ss_pred hhheeccCCCCCCccccCcCCccCCC------------ceEEEee-CC--CCceeEeEC------------------CEE
Confidence 4788899752 1356888864 5788853 22 344333321 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|+|..|.+||--- ...|| .-..++|++..-..++||++.-+++-+
T Consensus 259 i~V~p~pg~lvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~P~ 309 (360)
T PLN03178 259 VTAKCVPDSIVVHIGDTLEILSNG-RYKSILHRGLVNKEKVRISWAVFCEPP 309 (360)
T ss_pred EEcCCCCCeEEEEccHHHHHHhCC-ccccccceeecCCCCCeEEEEEEecCC
Confidence 789999998777520 11122 225789997533345799998887654
No 62
>COG4340 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.02 E-value=15 Score=32.36 Aligned_cols=43 Identities=30% Similarity=0.483 Sum_probs=28.8
Q ss_pred CCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc
Q 023053 207 EGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR 271 (288)
Q Consensus 207 eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~ 271 (288)
.||||..+..+.. +.+..=--..|.+++-- |++.+|.+||+..
T Consensus 159 ~gGet~lY~~~~~--------------~p~f~kvl~pGe~~~l~--------Dh~~~H~~tpi~p 201 (226)
T COG4340 159 DGGETDLYAPDGA--------------SPGFFKVLAPGEAVFLD--------DHRVLHGVTPIVP 201 (226)
T ss_pred cCceEEEEccCCC--------------CcceEEeccCCcEEEec--------cchhcccccceec
Confidence 6999998765321 12333334567766653 7899999999864
No 63
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=66.33 E-value=6.8 Score=34.55 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=29.6
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCC--ccceEEEEEEe
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPV--IRGNKWSATKW 280 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV--~~G~K~i~~~W 280 (288)
..+.+.-++|+++||.| .+.+|+..+. ..|.|+..+.|
T Consensus 219 ~~~~~~~~~GDlli~dN--------~~~lHgR~~~~~~~~~R~L~R~~ 258 (258)
T PF02668_consen 219 YTYRHRWQPGDLLIWDN--------HRVLHGRTAFDDPDGDRHLLRVW 258 (258)
T ss_dssp GEEEEE--TTEEEEEET--------TTEEEEE--E-STTSSEEEEEEE
T ss_pred hcccccCCCceEEEEcC--------CeeEecCCCCCCCCCCEEEEEeC
Confidence 45678889999999998 6899999999 67899999888
No 64
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown]
Probab=61.23 E-value=1.5 Score=43.14 Aligned_cols=72 Identities=28% Similarity=0.360 Sum_probs=53.2
Q ss_pred CceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc
Q 023053 192 GQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR 271 (288)
Q Consensus 192 ~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~ 271 (288)
+-+.....+|+||+++||+..|...... .....++|+.|+..-|.+- -...|+..+|++
T Consensus 364 ~~~~~~a~~~~~dd~~~~el~~t~~d~~--------------t~~a~~k~~~~re~~~~~g-------~e~~~~~~~~~k 422 (471)
T KOG4459|consen 364 TELDYFALLYLNDDFEGGELLFTEPDAK--------------TYTAISKPECGRECAFSSG-------AENPHGVKAVTK 422 (471)
T ss_pred HHHHhhccHhhcCccccccceecCCccc--------------chhhccccccccchhhhcc-------ccCccchhhhhh
Confidence 4567888999999999999999543211 1356789999999999753 245689999999
Q ss_pred ceEEEEEEeeeec
Q 023053 272 GNKWSATKWMHVH 284 (288)
Q Consensus 272 G~K~i~~~W~~~~ 284 (288)
|..=.+.-|....
T Consensus 423 g~e~~~~lw~~~~ 435 (471)
T KOG4459|consen 423 GLECAVALWPTLA 435 (471)
T ss_pred hhHHhhhcCcccC
Confidence 8766666665543
No 65
>PF03579 SHP: Small hydrophobic protein; InterPro: IPR005327 The small hydrophobic integral membrane protein, SH (previously designated 1A) is found to have a variety of glycosylated forms [, ]. This protein is a component of the mature respiratory syncytial virion [] where it may form complexes and appears to play a structural role.; GO: 0016020 membrane, 0016021 integral to membrane, 0048222 glycoprotein network
Probab=60.23 E-value=18 Score=25.55 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=25.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 023053 11 AKKWSTLTLVLSMLFMLTIVLLMLLAMGIF 40 (288)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (288)
.+-|.-+||++.+|.+.+|++++-+..+||
T Consensus 12 skFW~YFtLi~M~lti~~~~Iv~si~~AIL 41 (64)
T PF03579_consen 12 SKFWTYFTLIFMMLTIGFFFIVTSIMAAIL 41 (64)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344777899999999999999888888887
No 66
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=56.60 E-value=20 Score=34.60 Aligned_cols=49 Identities=22% Similarity=0.419 Sum_probs=31.3
Q ss_pred HHHHHhhCCCCCCCCceEEeecC-CCCccccCccccccccccCCCCceEEEE
Q 023053 148 KRIADFTFIPMEHGEGIQVLHYE-VGQKYDAHYDYFLDEFNTKNGGQRMATL 198 (288)
Q Consensus 148 ~ri~~~~~lp~~~~E~lqv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~ 198 (288)
+-+..+-++|-.....+.|. |. +||.|++|+|.. +-+-....|+|.+-+
T Consensus 105 ~l~~~FrflP~wr~ddiMIS-~a~~GGgvg~H~D~Y-DVfliQg~G~RRW~v 154 (383)
T COG2850 105 ALMEPFRFLPDWRIDDIMIS-FAAPGGGVGPHFDQY-DVFLIQGQGRRRWRV 154 (383)
T ss_pred HHHHHhccCccccccceEEE-EecCCCccCccccch-heeEEeecccceeec
Confidence 33346667887777888888 65 799999999963 222223345555443
No 67
>PF13677 MotB_plug: Membrane MotB of proton-channel complex MotA/MotB
Probab=56.02 E-value=25 Score=24.64 Aligned_cols=24 Identities=13% Similarity=0.101 Sum_probs=11.6
Q ss_pred CCcccccccccccchhHHHHHHHH
Q 023053 1 MVKLRHSRLQAKKWSTLTLVLSML 24 (288)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~ 24 (288)
|+|.|..+-.......+.+.++=|
T Consensus 1 Makkk~~~~~~~~~~~WlvtyaDl 24 (58)
T PF13677_consen 1 MAKKKKKEEEEEGSPRWLVTYADL 24 (58)
T ss_pred CCCCCCCCCCCCCCccHHHHHHHH
Confidence 777766333333344444444433
No 68
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=55.17 E-value=19 Score=32.46 Aligned_cols=40 Identities=30% Similarity=0.547 Sum_probs=33.7
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc---ceEEEEEEeee
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR---GNKWSATKWMH 282 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~---G~K~i~~~W~~ 282 (288)
..+.++-++|++|+|-| .+++|+-.+-.. +.||..+.|+.
T Consensus 218 ~~~~~~l~~Gdivi~DN--------~r~lHgR~~f~~~~~~~R~L~r~~i~ 260 (262)
T cd00250 218 NQLTVKLEPGDLLIFDN--------RRVLHGRTAFSPRYGGDRWLKGCYVD 260 (262)
T ss_pred hEEEEEcCCCCEEEEec--------hhhhcCCCCCCCCCCCceEEEEEEec
Confidence 45788999999999998 689999988764 57999999875
No 69
>KOG4176 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.30 E-value=1.6e+02 Score=28.13 Aligned_cols=116 Identities=19% Similarity=0.259 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCC--CceeeecCCCc
Q 023053 141 RIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEE--GGETVFPAANA 218 (288)
Q Consensus 141 ~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~e--GGeT~Fp~~~~ 218 (288)
.+++.|.+|+-.+--+|. ..+.+-+..|++|+.-.+|+|... ..+.+.|+ .+|+++.. |=...+-...
T Consensus 190 s~~~~ii~rlv~~~~ip~-~pd~~~iN~Ye~G~~i~ph~~~~~-------F~~Pi~sl-S~lSe~~m~Fg~~~~~~~~~- 259 (323)
T KOG4176|consen 190 SLFKSIIDRLVSWRVIPE-RPDQCTINFYEPGDGIPPHIDHSA-------FLDPISSL-SFLSECTMEFGHGLLSDNIG- 259 (323)
T ss_pred hHHHHHHHHhhhhccCCC-CCCeeEEEeeCCCCCCCCCCChHH-------hcCceEEE-EeecceeEEecccccccCcc-
Confidence 467777788877777776 467899999999999999996421 23344444 45776520 1111111000
Q ss_pred ccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeeccc
Q 023053 219 NFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 286 (288)
Q Consensus 219 ~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~ 286 (288)
. + ..-+++.-+.|.+++-.+... ....|+++|+. +|.+.-.+.+.++.
T Consensus 260 ~---------~----~g~~s~p~~~g~~lvi~~~~a-----d~~~~~~~~~~--~kRisitfrki~~~ 307 (323)
T KOG4176|consen 260 N---------F----RGSLSLPLRYGSVLVIRGRSA-----DVAPHCIRPSR--NKRISITFRKIRPD 307 (323)
T ss_pred c---------c----ccccccccccCeEEEeCCCcc-----cccccccCCCC--CceEEEEEEEeccC
Confidence 0 0 012667778888888865322 25678888853 57777777766654
No 70
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=39.49 E-value=33 Score=33.55 Aligned_cols=75 Identities=24% Similarity=0.388 Sum_probs=49.3
Q ss_pred CceEEEEEEeecCCCCCceeeecCCCccccc--ccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCC
Q 023053 192 GQRMATLLMYLSDVEEGGETVFPAANANFTS--VRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPV 269 (288)
Q Consensus 192 ~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~--~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV 269 (288)
..|..|+.+||++.++||+..|-........ ...|..++.|. ..|.+++.++ .+.|+..+-
T Consensus 280 ~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h--------~p~qa~LHrg---------~~~~~a~~~ 342 (415)
T KOG1971|consen 280 DAREVGLFVCLSNQFEGGELLFTGKYCTKHLRTDDLWEIFDNSH--------DPGQAYLHRG---------YHKHGARAT 342 (415)
T ss_pred chhhcceeEEecccccCCeeEeeccccccccCCCchhhhccCcC--------CCccceecCc---------chhcccccc
Confidence 4689999999999999999999765433211 12345554442 2466778775 455666665
Q ss_pred ccceEEEEEEeeee
Q 023053 270 IRGNKWSATKWMHV 283 (288)
Q Consensus 270 ~~G~K~i~~~W~~~ 283 (288)
+.|..+.-..|+..
T Consensus 343 ~~~~~~~nv~~~~~ 356 (415)
T KOG1971|consen 343 IVGQPCPNVYWFPI 356 (415)
T ss_pred CCCCCCCceeeehh
Confidence 66666666666644
No 71
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A ....
Probab=34.16 E-value=60 Score=28.24 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=29.9
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc-eEEEEEEeeeec
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG-NKWSATKWMHVH 284 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W~~~~ 284 (288)
..+.+.-++|++|+.+ +.-+|.+.-...+ .-.+++-|++.+
T Consensus 207 ~~~~~~l~pGD~LfiP---------~gWwH~V~~~~~~~~sisvn~w~~~~ 248 (251)
T PF13621_consen 207 PPYEVVLEPGDVLFIP---------PGWWHQVENLSDDDLSISVNYWFRTP 248 (251)
T ss_dssp -EEEEEEETT-EEEE----------TT-EEEEEESTTSSCEEEEEEEEESS
T ss_pred ceeEEEECCCeEEEEC---------CCCeEEEEEcCCCCeEEEEEEEeccc
Confidence 5678888999999998 4789999888333 478899999865
No 72
>cd03528 Rieske_RO_ferredoxin Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO). The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The ferredoxin component contains either a plant-type or Rieske-type [2Fe-2S] cluster. The Rieske ferredoxin component in this family carries an electron from the RO reductase component to the terminal RO oxygenase component. BPDO degrades biphenyls and polychlorinated biphenyls. BPDO ferredoxin (BphF) has structural features consistent with a minimal and perhaps archetypical Rieske protein in that the in
Probab=33.19 E-value=76 Score=23.71 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=28.9
Q ss_pred EEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 199 liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.-++|...|+...|.... ..+.|.-..|....|.| ...|.|+|+..|
T Consensus 4 v~~~~~l~~g~~~~~~~~g-----------------~~~~v~r~~~~~~a~~~---------~CpH~g~~L~~g 51 (98)
T cd03528 4 VCAVDELPEGEPKRVDVGG-----------------RPIAVYRVDGEFYATDD---------LCTHGDASLSEG 51 (98)
T ss_pred EEEhhhcCCCCEEEEEECC-----------------eEEEEEEECCEEEEECC---------cCCCCCCCCCCC
Confidence 3445666666666554321 23444444567677754 788999998765
No 73
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=32.50 E-value=61 Score=24.68 Aligned_cols=20 Identities=10% Similarity=0.408 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 023053 17 LTLVLSMLFMLTIVLLMLLA 36 (288)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~ 36 (288)
+-+.|++|+++.|+||++++
T Consensus 42 FWv~LA~FV~~lF~iL~~ms 61 (90)
T PF15183_consen 42 FWVSLAAFVVFLFLILLYMS 61 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34556666666666666654
No 74
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=31.53 E-value=31 Score=31.56 Aligned_cols=31 Identities=23% Similarity=0.276 Sum_probs=0.0
Q ss_pred cCccccccccccCCCCceEEEEEEeecCCCCCceeee
Q 023053 177 AHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVF 213 (288)
Q Consensus 177 ~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~F 213 (288)
||.|..... ..-.+++|..+.-..+||+|.|
T Consensus 96 wHtD~sy~~------~pp~~~~L~~~~~p~~GG~T~f 126 (277)
T PRK09553 96 WHTDVTFIE------TPPLGAILAAKQLPSTGGDTLW 126 (277)
T ss_pred CeecccCee------CCCceeEEEEEecCCCCCccHh
No 75
>PRK09965 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional
Probab=29.98 E-value=1e+02 Score=23.71 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=31.2
Q ss_pred EEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 197 TLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 197 T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.+.-++|..+|+...|... ..+.|.-..|....|.| ...|.++|+..|
T Consensus 4 ~~v~~~~~l~~g~~~~~~~~------------------~~i~v~~~~g~~~A~~~---------~CpH~g~~L~~G 52 (106)
T PRK09965 4 IYACPVADLPEGEALRVDTS------------------PVIALFNVGGEFYAIDD---------RCSHGNASLSEG 52 (106)
T ss_pred EEeeeHHHcCCCCeEEEeCC------------------CeEEEEEECCEEEEEeC---------cCCCCCCCCCce
Confidence 34556777777877766531 12444445777777754 788999988543
No 76
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=29.82 E-value=56 Score=31.22 Aligned_cols=43 Identities=16% Similarity=0.302 Sum_probs=35.2
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeeccc
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 286 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~ 286 (288)
..+.++-+.|++++|-| .+++|+-..-. |.||....++--.+|
T Consensus 311 ~~~~~~l~pGd~vi~DN--------~rvLHgRtaf~-g~R~L~G~Y~d~D~~ 353 (362)
T TIGR02410 311 NEIEFKLRPGTVLIFDN--------WRVLHSRTSFT-GYRRMCGCYLTRDDF 353 (362)
T ss_pred cEEEEEcCCccEEEEee--------EEEeecCCCcC-CceEEEEEEEccHHH
Confidence 45678889999999998 68999999884 889988888765544
No 77
>cd03530 Rieske_NirD_small_Bacillus Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.
Probab=28.60 E-value=1e+02 Score=23.14 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=17.3
Q ss_pred EecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 239 VKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 239 V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
++...|....|.| ...|+++|+..|
T Consensus 28 ~r~~~g~~~A~~~---------~CpH~g~~L~~g 52 (98)
T cd03530 28 FRTADDEVFALEN---------RCPHKGGPLSEG 52 (98)
T ss_pred EEeCCCCEEEEcC---------cCCCCCCCccCC
Confidence 4444577666654 788999988765
No 78
>TIGR02223 ftsN cell division protein FtsN. FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by Pfam model pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis.
Probab=27.79 E-value=1.4e+02 Score=27.94 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=20.9
Q ss_pred ccCceeEEEeecCCCEEEEcCC--------------CCHHHHHHHHHHh
Q 023053 71 EKGEQWTEIVAWEPRAFVYHNF--------------LSKAECEYLIDLA 105 (288)
Q Consensus 71 ~~~~~~ve~ls~~P~i~vi~nf--------------Ls~eEC~~Li~~a 105 (288)
...+.|-.+-.++.+-+.+++- ||+|+-+.|...-
T Consensus 78 kPeE~w~YikeLe~r~v~v~~~~~~~~~~~~~~~~~lt~eq~q~leq~~ 126 (298)
T TIGR02223 78 KPEERWSYIEELEAREVLINDPEEPSNGGGVEESAQLTAEQRQLLEQMQ 126 (298)
T ss_pred CCcccccccccccCcccccCCccccccccccccccccCHHHHHHHHHHH
Confidence 3456666565666666666653 5677766665543
No 79
>PRK13726 conjugal transfer pilus assembly protein TraE; Provisional
Probab=27.22 E-value=78 Score=27.63 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=19.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhhHhcc
Q 023053 10 QAKKWSTLTLVLSMLFMLTIVLLMLLAMGIFYI 42 (288)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (288)
.+|+++..-+.+..+.|+.++++.+++-.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~v~l~~ 36 (188)
T PRK13726 4 GARLSTSRVMAIAFIFLSVLIVLSLSVNVIQGV 36 (188)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555544555555566666666666666644
No 80
>cd03474 Rieske_T4moC Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. T4mo is a four-protein complex that catalyzes the NADH- and O2-dependent hydroxylation of toluene to form p-cresol. T4mo consists of an NADH oxidoreductase (T4moF), a diiron hydroxylase (T4moH), a catalytic effector protein (T4moD), and a Rieske ferredoxin (T4moC). T4moC contains a Rieske domain and functions as an obligate electron carrier between T4moF and T4moH. Rieske ferredoxins are found as subunits of membrane oxidase complexes, cis-dihydrodiol-forming aromatic dioxygenases, bacterial assimilatory nitrite reductases, and arsenite oxidase. Rieske ferredoxins are also found as soluble electron carriers in bacterial dioxygenase and monooxygenase complexes.
Probab=27.20 E-value=1.3e+02 Score=23.10 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=18.9
Q ss_pred eEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 237 LSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 237 ~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+-++...|..-.|.| ...|+++|+..|
T Consensus 26 ~~~~~~~g~~~A~~n---------~CpH~g~~L~~g 52 (108)
T cd03474 26 LLVAPEGGEFRAFQG---------ICPHQEIPLAEG 52 (108)
T ss_pred EEEEccCCeEEEEcC---------cCCCCCCCcccC
Confidence 345666777777754 788888888765
No 81
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=26.81 E-value=1.3e+02 Score=19.12 Aligned_cols=26 Identities=15% Similarity=0.315 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhHhccccCCC
Q 023053 22 SMLFMLTIVLLMLLAMGIFYIPIGDD 47 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (288)
++=+..+.++....++-||+..++..
T Consensus 3 ~LK~~Vy~vV~ffv~LFifGflsnDp 28 (36)
T PF02532_consen 3 TLKIFVYTVVIFFVSLFIFGFLSNDP 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred EEEEeehhhHHHHHHHHhccccCCCC
Confidence 34445667777777777777766553
No 82
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=26.13 E-value=77 Score=30.23 Aligned_cols=43 Identities=19% Similarity=0.229 Sum_probs=34.6
Q ss_pred CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc--cceEEEEEEeeeeccc
Q 023053 236 GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI--RGNKWSATKWMHVHEY 286 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~W~~~~~~ 286 (288)
.+..+=++|++++|-| .+++|+..+-. .|.||....++--.+|
T Consensus 313 ~~~~~l~pGd~vi~DN--------~rvlH~R~af~~~~~~R~L~g~Y~d~d~~ 357 (366)
T TIGR02409 313 KFTFKLEPGDLVLFDN--------TRLLHARDAFSNPEGKRHLQGCYADWDGL 357 (366)
T ss_pred EEEEEcCCCcEEEEec--------eEEeecCCCcCCCCCceEEEEEEEccHHH
Confidence 4677889999999998 68999998875 6889988887765544
No 83
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=25.46 E-value=65 Score=28.88 Aligned_cols=17 Identities=24% Similarity=0.049 Sum_probs=12.1
Q ss_pred HHHHHHHHHHhhCCCCC
Q 023053 143 IRGIEKRIADFTFIPME 159 (288)
Q Consensus 143 ~~~I~~ri~~~~~lp~~ 159 (288)
+..+.+.|...+|++..
T Consensus 152 W~Em~~Ais~atgi~~~ 168 (217)
T PF07423_consen 152 WNEMLKAISYATGISED 168 (217)
T ss_pred HHHHHHHHHHhhCCChh
Confidence 45666778888888853
No 84
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=24.92 E-value=73 Score=25.27 Aligned_cols=15 Identities=33% Similarity=0.696 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHhhHh
Q 023053 26 MLTIVLLMLLAMGIF 40 (288)
Q Consensus 26 ~~~~~~~~~~~~~~~ 40 (288)
+++++++|+|++-|+
T Consensus 6 il~llLll~l~asl~ 20 (107)
T PF15330_consen 6 ILALLLLLSLAASLL 20 (107)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444443
No 85
>PF07219 HemY_N: HemY protein N-terminus; InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=24.55 E-value=1e+02 Score=24.00 Aligned_cols=12 Identities=17% Similarity=0.216 Sum_probs=7.3
Q ss_pred HHhhHhccccCC
Q 023053 35 LAMGIFYIPIGD 46 (288)
Q Consensus 35 ~~~~~~~~~~~~ 46 (288)
+...++++|...
T Consensus 36 ll~~~~~~p~~~ 47 (108)
T PF07219_consen 36 LLRRLLSLPSRV 47 (108)
T ss_pred HHHHHHhChHHH
Confidence 334777777544
No 86
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=24.19 E-value=88 Score=28.01 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=27.1
Q ss_pred CCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecC
Q 023053 172 GQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPA 215 (288)
Q Consensus 172 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~ 215 (288)
.....+|+|..... ..-.+.+|..+....+||+|.|-+
T Consensus 93 ~~~l~~HtD~~y~~------~pp~~~~L~cl~~~~~GG~T~~vd 130 (262)
T cd00250 93 NTLLPLHTDLAYHE------YRPGLQILHCLRNTATGGATLLVD 130 (262)
T ss_pred cCCcCccccCCCCC------CCCceEEEEEeccCCCCCcceeee
Confidence 35567999986532 123467777788888999999976
No 87
>PF15240 Pro-rich: Proline-rich
Probab=22.34 E-value=57 Score=28.38 Aligned_cols=12 Identities=25% Similarity=0.628 Sum_probs=5.0
Q ss_pred HHHHHhhHhccc
Q 023053 32 LMLLAMGIFYIP 43 (288)
Q Consensus 32 ~~~~~~~~~~~~ 43 (288)
||||.+++|.|.
T Consensus 3 lVLLSvALLALS 14 (179)
T PF15240_consen 3 LVLLSVALLALS 14 (179)
T ss_pred hHHHHHHHHHhh
Confidence 344444444443
No 88
>PF10968 DUF2770: Protein of unknown function (DUF2770); InterPro: IPR024494 Members in this family of proteins from Enterobacteria are annotated as YceO; however, currently no function is known.
Probab=22.22 E-value=88 Score=19.91 Aligned_cols=13 Identities=54% Similarity=0.723 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHh
Q 023053 25 FMLTIVLLMLLAM 37 (288)
Q Consensus 25 ~~~~~~~~~~~~~ 37 (288)
+|+++++|.+|+.
T Consensus 16 lmlYi~Lw~lL~~ 28 (36)
T PF10968_consen 16 LMLYICLWLLLAA 28 (36)
T ss_pred HHHHHHHHHHHHH
Confidence 5778888777765
No 89
>PF00355 Rieske: Rieske [2Fe-2S] domain; InterPro: IPR017941 There are multiple types of iron-sulphur clusters which are grouped into three main categories based on their atomic content: [2Fe-2S], [3Fe-4S], [4Fe-4S] (see PDOC00176 from PROSITEDOC), and other hybrid or mixed metal types. Two general types of [2Fe-2S] clusters are known and they differ in their coordinating residues. The ferredoxin-type [2Fe-2S] clusters are coordinated to the protein by four cysteine residues (see PDOC00175 from PROSITEDOC). The Rieske-type [2Fe-2S] cluster is coordinated to its protein by two cysteine residues and two histidine residues [, ]. The structure of several Rieske domains has been solved []. It contains three layers of antiparallel beta sheets forming two beta sandwiches. Both beta sandwiches share the central sheet 2. The metal-binding site is at the top of the beta sandwich formed by the sheets 2 and 3. The Fe1 iron of the Rieske cluster is coordinated by two cysteines while the other iron Fe2 is coordinated by two histidines. Two inorganic sulphide ions bridge the two iron ions forming a flat, rhombic cluster. Rieske-type iron-sulphur clusters are common to electron transfer chains of mitochondria and chloroplast and to non-haem iron oxygenase systems: The Rieske protein of the Ubiquinol-cytochrome c reductase (1.10.2.2 from EC) (also known as the bc1 complex or complex III), a complex of the electron transport chains of mitochondria and of some aerobic prokaryotes; it catalyses the oxidoreduction of ubiquinol and cytochrome c. The Rieske protein of chloroplastic plastoquinone-plastocyanin reductase (1.10.99.1 from EC) (also known as the b6f complex). It is functionally similar to the bc1 complex and catalyses the oxidoreduction of plastoquinol and cytochrome f. Bacterial naphthalene 1,2-dioxygenase subunit alpha, a component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyses the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol. Bacterial 3-phenylpropionate dioxygenase ferredoxin subunit. Bacterial toluene monoxygenase. Bacterial biphenyl dioxygenase. ; GO: 0016491 oxidoreductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process; PDB: 2XRX_A 2XR8_O 2XSH_G 2XSO_I 2YFI_C 2YFL_A 2YFJ_K 1G8J_D 1G8K_D 1NYK_B ....
Probab=22.19 E-value=1.4e+02 Score=22.16 Aligned_cols=29 Identities=28% Similarity=0.536 Sum_probs=21.8
Q ss_pred CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccce
Q 023053 236 GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGN 273 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~ 273 (288)
.+.+.-..|....|.| ...|.++|+..|.
T Consensus 26 ~v~~~~~~g~~~A~~~---------~CpH~g~~l~~~~ 54 (97)
T PF00355_consen 26 LVLVRRSDGEIYAFSN---------RCPHQGCPLSEGP 54 (97)
T ss_dssp EEEEEETTTEEEEEES---------B-TTTSBBGGCSS
T ss_pred EEEEEeCCCCEEEEEc---------cCCccceeEccee
Confidence 4556677788888875 7899999998884
No 90
>cd04337 Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b. CAO is found not only in plants but also in chlorophytes and prochlorophytes. This domain represents the N-terminal rieske domain of the oxygenase alpha subunit. ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Cao is closely related to several other plant RO's including Tic 55, a 55 kDa protein associated with protein transport through the inner
Probab=22.17 E-value=1.6e+02 Score=23.72 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=38.0
Q ss_pred ceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 193 ~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
.+.+..+..+++..+|.-+.|.-... .-+-++-..|++-.|.| ...|.|+|+..|
T Consensus 15 ~~~W~~v~~~~el~~g~~~~~~v~g~----------------~l~l~r~~~g~v~A~~n---------~CpH~g~~L~~G 69 (129)
T cd04337 15 RNFWYPVEFSKDLKMDTMVPFELFGQ----------------PWVLFRDEDGTPGCIRD---------ECAHRACPLSLG 69 (129)
T ss_pred hCccEEEEEHHHCCCCCeEEEEECCc----------------EEEEEECCCCcEEEEeC---------cCCCCcCCcccC
Confidence 35677777788888777777654321 12345566788888865 788999998876
No 91
>COG5393 Predicted membrane protein [Function unknown]
Probab=22.17 E-value=1.1e+02 Score=24.84 Aligned_cols=17 Identities=18% Similarity=0.573 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 023053 18 TLVLSMLFMLTIVLLML 34 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (288)
|+.|++|.++++.+|++
T Consensus 57 tl~fa~~~lmsL~vLvi 73 (131)
T COG5393 57 TLLFAAFGLMSLMVLVI 73 (131)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44555555555444433
No 92
>cd04338 Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane. This domain represents the N-terminal Rieske domain of the Tic55 oxygenase alpha subunit. Tic55 is closely related to the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO), Ptc52, and ACD1 (accelerated cell death 1). ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis.
Probab=21.99 E-value=1.5e+02 Score=23.95 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=37.5
Q ss_pred ceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeE-EecCCCcEEEEecCCCCCCCCCCCccccCCCcc
Q 023053 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLS-VKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR 271 (288)
Q Consensus 193 ~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~-V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~ 271 (288)
.+.+..+..++|..+|+-..|-... ..+. ++-..|.+-.|.| ...|+|.|+..
T Consensus 15 ~~~W~~v~~~~el~~~~~~~~~v~g-----------------~~ivl~r~~~G~v~A~~n---------~CpHrga~L~~ 68 (134)
T cd04338 15 REEWYPLYLLKDVPTDAPLGLSVYD-----------------EPFVLFRDQNGQLRCLED---------RCPHRLAKLSE 68 (134)
T ss_pred ccCcEEEEEHHHCCCCCCEEEEECC-----------------ceEEEEEcCCCCEEEEcC---------cCCCCcCcccC
Confidence 4567888888998888866554321 1233 3456777777765 78899999887
Q ss_pred ce
Q 023053 272 GN 273 (288)
Q Consensus 272 G~ 273 (288)
|.
T Consensus 69 G~ 70 (134)
T cd04338 69 GQ 70 (134)
T ss_pred Ce
Confidence 74
No 93
>cd03542 Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. HBDO catalyzes the double hydroxylation of 2-halobenzoates with concomitant release of halogenide and carbon dioxide, yielding catechol.
Probab=21.77 E-value=1.1e+02 Score=24.42 Aligned_cols=27 Identities=22% Similarity=0.348 Sum_probs=20.3
Q ss_pred eEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 237 LSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 237 ~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+-++...|..-.|.| ...|+|+++..|
T Consensus 27 ~l~r~~~g~v~A~~n---------~C~Hrg~~L~~g 53 (123)
T cd03542 27 VITRDKDGELNAFIN---------ACSHRGAMLCRR 53 (123)
T ss_pred EEEECCCCCEEEEcc---------cCcCCCCccccc
Confidence 445666788888876 788999988765
No 94
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=20.61 E-value=95 Score=29.61 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=25.7
Q ss_pred ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCC
Q 023053 174 KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAA 216 (288)
Q Consensus 174 ~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~ 216 (288)
...+|+|...-+ ..-.+++|..+.-..+||+|.|-+.
T Consensus 186 ~l~~HtD~~y~~------~pP~~~~L~c~~~~~~GG~T~~~d~ 222 (366)
T TIGR02409 186 GLPFHTDNPYRD------HPPGLQLLHCLESTVEGGDSLFVDG 222 (366)
T ss_pred cccccccCCccC------CCCceeeeeecccCCCCcceeeeeH
Confidence 456999975421 1223677777887889999999653
No 95
>cd03467 Rieske Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.
Probab=20.41 E-value=2.2e+02 Score=21.15 Aligned_cols=28 Identities=21% Similarity=0.381 Sum_probs=18.0
Q ss_pred CCCCccccCCCccce--EEEEEEeeeeccc
Q 023053 259 DPSSLHGGCPVIRGN--KWSATKWMHVHEY 286 (288)
Q Consensus 259 D~~~lH~g~PV~~G~--K~i~~~W~~~~~~ 286 (288)
+....|.++|+..|. .-.++-..|...|
T Consensus 39 ~~~CpH~g~~l~~~~~~~~~i~Cp~H~~~f 68 (98)
T cd03467 39 SNRCTHQGCPLSEGEGEDGCIVCPCHGSRF 68 (98)
T ss_pred cCcCCCCCccCCcCccCCCEEEeCCCCCEE
Confidence 357889999998763 3445555555444
No 96
>PLN00139 hypothetical protein; Provisional
Probab=20.25 E-value=1.1e+02 Score=28.87 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=25.9
Q ss_pred CCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecC
Q 023053 171 VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPA 215 (288)
Q Consensus 171 ~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~ 215 (288)
..+...+|+|..... ..-..+++..+.-+.+||+|.|-+
T Consensus 109 ~~~~i~~H~E~sy~~------~pP~~~~f~C~~~p~~GGeT~~aD 147 (320)
T PLN00139 109 LSEFIYYHHEMVLIK------ESPKKVILFCEIPPPEGGQTPFVP 147 (320)
T ss_pred ccccccccccccCcc------CCCceEEEEecccCCCCCCCeeec
Confidence 334567999986531 122456666777778999999954
No 97
>COG3872 Predicted metal-dependent enzyme [General function prediction only]
Probab=20.20 E-value=1.1e+02 Score=28.29 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=11.3
Q ss_pred ccccccccccchhH
Q 023053 4 LRHSRLQAKKWSTL 17 (288)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (288)
.+|||+++|=-+++
T Consensus 199 qk~SrlHpRCGtsF 212 (318)
T COG3872 199 QKQSRLHPRCGTSF 212 (318)
T ss_pred hhhcccccccCchh
Confidence 36899999997764
Done!