Query 023053
Match_columns 288
No_of_seqs 216 out of 1160
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:33:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 1.2E-54 4.1E-59 385.9 20.1 213 71-287 7-221 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 7.3E-52 2.5E-56 366.8 12.7 194 68-287 23-216 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 5.9E-34 2E-38 255.9 10.1 173 77-283 12-195 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 3.3E-24 1.1E-28 193.1 16.8 171 84-286 26-216 (247)
5 3kt7_A PKHD-type hydroxylase T 99.1 3E-10 1E-14 112.3 12.7 116 146-285 106-230 (633)
6 2rg4_A Uncharacterized protein 98.7 2E-07 6.8E-12 81.8 12.3 101 163-283 104-207 (216)
7 2a1x_A Phytanoyl-COA dioxygena 98.0 0.00025 8.5E-09 64.4 15.8 185 85-283 35-254 (308)
8 2rdq_A 1-deoxypentalenic acid 97.9 4.2E-05 1.5E-09 68.6 9.8 99 172-284 134-253 (288)
9 2fct_A Syringomycin biosynthes 97.8 0.0003 1E-08 63.9 14.3 184 85-282 22-259 (313)
10 2opw_A Phyhd1 protein; double- 97.4 0.00087 3E-08 60.1 10.8 95 172-281 150-264 (291)
11 3emr_A ECTD; double stranded b 97.3 0.00032 1.1E-08 64.3 6.7 181 85-282 47-267 (310)
12 2iuw_A Alkylated repair protei 97.3 0.003 1E-07 55.8 12.2 182 70-279 25-226 (238)
13 3gja_A CYTC3; halogenase, beta 97.0 0.0043 1.5E-07 56.9 10.9 179 86-281 25-260 (319)
14 3s57_A Alpha-ketoglutarate-dep 96.9 0.014 4.8E-07 50.3 12.9 176 78-279 4-199 (204)
15 3i3q_A Alpha-ketoglutarate-dep 96.9 0.015 5.2E-07 50.4 12.7 108 142-279 85-199 (211)
16 3tht_A Alkylated DNA repair pr 96.6 0.015 5.2E-07 54.1 11.2 139 80-250 107-259 (345)
17 3nnf_A CURA; non-HAEM Fe(II)/a 93.5 0.088 3E-06 48.1 5.3 126 86-214 42-176 (344)
18 1w9y_A 1-aminocyclopropane-1-c 88.1 2.8 9.7E-05 38.0 9.9 89 163-284 156-254 (319)
19 1dcs_A Deacetoxycephalosporin 82.0 3.9 0.00013 36.9 7.8 108 145-284 132-268 (311)
20 1gp6_A Leucoanthocyanidin diox 82.0 9.8 0.00034 34.9 10.6 88 163-284 211-308 (356)
21 3pl0_A Uncharacterized protein 80.4 3.5 0.00012 36.4 6.7 71 192-286 170-250 (254)
22 3oox_A Putative 2OG-Fe(II) oxy 74.5 14 0.00047 33.1 9.0 106 145-283 144-271 (312)
23 1odm_A Isopenicillin N synthas 70.0 13 0.00046 33.6 7.9 108 142-284 152-289 (331)
24 3on7_A Oxidoreductase, iron/as 53.7 22 0.00074 31.4 6.0 88 163-283 151-254 (280)
25 2wbq_A L-arginine beta-hydroxy 48.0 18 0.00062 32.8 4.6 44 235-286 295-342 (358)
26 2pp6_A Gifsy-2 prophage ATP-bi 47.6 20 0.0007 27.1 4.0 26 239-285 62-87 (102)
27 2og5_A Putative oxygenase; non 46.9 18 0.00062 32.9 4.4 43 236-286 291-337 (357)
28 1nx8_A CARC, carbapenem syntha 45.2 24 0.00082 30.4 4.8 41 234-282 229-271 (273)
29 3dqy_A Toluene 1,2-dioxygenase 43.3 43 0.0015 24.5 5.4 48 199-272 5-52 (106)
30 1otj_A Alpha-ketoglutarate-dep 38.0 37 0.0012 29.5 4.9 41 236-284 235-276 (283)
31 3pvj_A Alpha-ketoglutarate-dep 35.7 27 0.00092 30.6 3.6 36 173-214 92-127 (277)
32 1otj_A Alpha-ketoglutarate-dep 35.4 31 0.0011 30.0 3.9 36 175-216 96-131 (283)
33 1ds1_A Clavaminate synthase 1; 34.2 36 0.0012 30.2 4.3 42 235-284 258-303 (324)
34 3o2g_A Gamma-butyrobetaine dio 33.8 27 0.00093 32.3 3.4 44 235-286 327-373 (388)
35 1oih_A Putative alkylsulfatase 33.2 32 0.0011 30.2 3.7 36 172-213 102-137 (301)
36 1vm9_A Toluene-4-monooxygenase 30.0 81 0.0028 23.2 5.0 27 237-272 28-54 (111)
37 2qpz_A Naphthalene 1,2-dioxyge 28.2 87 0.003 22.6 4.8 25 238-272 30-54 (103)
38 3r1j_A Alpha-ketoglutarate-dep 28.1 42 0.0014 29.9 3.6 36 173-214 98-133 (301)
39 2q4a_A Clavaminate synthase-li 27.5 32 0.0011 30.6 2.7 36 235-279 292-327 (330)
40 2i7f_A Ferredoxin component of 26.7 1.2E+02 0.0043 21.9 5.6 51 196-272 4-55 (108)
41 2q4a_A Clavaminate synthase-li 26.4 29 0.001 30.9 2.2 40 171-216 113-152 (330)
42 4aiv_A Probable nitrite reduct 25.9 1.7E+02 0.0057 22.1 6.2 55 194-272 8-62 (119)
43 1nx8_A CARC, carbapenem syntha 25.2 38 0.0013 29.2 2.6 38 173-216 96-135 (273)
44 1o51_A Hypothetical protein TM 24.1 62 0.0021 24.7 3.4 73 97-169 31-113 (114)
45 3gce_A Ferredoxin component of 23.9 77 0.0026 23.9 3.9 51 196-272 11-61 (121)
46 3eat_X Pyoverdine biosynthesis 23.0 89 0.003 27.4 4.7 41 235-283 240-281 (293)
47 2dbn_A Hypothetical protein YB 22.0 32 0.0011 32.9 1.6 79 191-282 295-403 (461)
48 2wbq_A L-arginine beta-hydroxy 21.4 62 0.0021 29.1 3.4 37 173-216 163-199 (358)
49 3eat_X Pyoverdine biosynthesis 20.3 65 0.0022 28.3 3.2 37 174-216 108-146 (293)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=1.2e-54 Score=385.92 Aligned_cols=213 Identities=54% Similarity=0.990 Sum_probs=195.5
Q ss_pred ccCceeEEEeecCCCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCCccccceeeecceeecCCccHHHHHHHHHH
Q 023053 71 EKGEQWTEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRI 150 (288)
Q Consensus 71 ~~~~~~ve~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri 150 (288)
...+.|+|+||++|+|++|+||||++||++||+++++.+.+++++++.+|....+++|+|.++|++..+++++++|++||
T Consensus 7 ~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~ri 86 (224)
T 2jig_A 7 EEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRV 86 (224)
T ss_dssp CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHHH
T ss_pred cccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHHH
Confidence 57889999999999999999999999999999999998999999988777777888999999999976789999999999
Q ss_pred HHhhCCCCCCCCceEEeecCCCCccccCcccccccccc--CCCCceEEEEEEeecCCCCCceeeecCCCccccccccccc
Q 023053 151 ADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNT--KNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNE 228 (288)
Q Consensus 151 ~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~--~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~ 228 (288)
.+++++|...+|++||+||++||+|++|+|++.+..+. ..+++|++|+++||||+++||||+||.... .+.|+.
T Consensus 87 ~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~----~~~~~~ 162 (224)
T 2jig_A 87 AQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQ----KVTGDG 162 (224)
T ss_dssp HHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSS----CCCSTT
T ss_pred HHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCccc----cccccc
Confidence 99999999899999999999999999999998653221 346899999999999999999999998642 256788
Q ss_pred ccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeecccc
Q 023053 229 LSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYK 287 (288)
Q Consensus 229 ~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
+++|.+.+++|+|++|+||+|+|+.+||++|++++|+||||++|+||++++|++.++|.
T Consensus 163 ~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~ 221 (224)
T 2jig_A 163 WSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIG 221 (224)
T ss_dssp SCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCC
T ss_pred ccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcC
Confidence 89999889999999999999999999999999999999999999999999999999985
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=7.3e-52 Score=366.82 Aligned_cols=194 Identities=44% Similarity=0.742 Sum_probs=172.3
Q ss_pred cccccCceeEEEeecCCCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCCccccceeeecceeecCCccHHHHHHH
Q 023053 68 IAEEKGEQWTEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIE 147 (288)
Q Consensus 68 ~~~~~~~~~ve~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~~I~ 147 (288)
+.++.....+++++++|+|++|+||||++||++||+++++.+++|++..+ ...+++|+|+++|++. ++++++|+
T Consensus 23 ~~~~~r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~----~~~~~~RtS~~~wl~~--~~~v~~i~ 96 (216)
T 3itq_A 23 IKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS----RDVNDIRTSSGAFLDD--NELTAKIE 96 (216)
T ss_dssp EECSSCEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC--CHHHHHHH
T ss_pred EecCCceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC----CccCCcEeeeeEEeCC--cHHHHHHH
Confidence 46777888999999999999999999999999999999998888887211 3567899999999986 89999999
Q ss_pred HHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccc
Q 023053 148 KRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWN 227 (288)
Q Consensus 148 ~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~ 227 (288)
+||.+++|++.+.+|.+||+||++||+|++|+|++.+.. ....++|++|+++||||+++||||+||..
T Consensus 97 ~Ri~~~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~-~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~----------- 164 (216)
T 3itq_A 97 KRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHS-RSAANNRISTLVMYLNDVEEGGETFFPKL----------- 164 (216)
T ss_dssp HHHHHHHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTS-GGGGGCEEEEEEEECSCCSEECCEEETTT-----------
T ss_pred HHHHHhcCceeccccceeEEEeCCCCccccccCCCcCCC-cccCCceEEEEEEecccCCcCceeEecCC-----------
Confidence 999999999999999999999999999999999986421 12358899999999999999999999973
Q ss_pred cccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeecccc
Q 023053 228 ELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYK 287 (288)
Q Consensus 228 ~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 287 (288)
+++|+|++|+||+|+|+++||++|++++|+||||++|+||++++|+|.++|+
T Consensus 165 --------~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~~ 216 (216)
T 3itq_A 165 --------NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK 216 (216)
T ss_dssp --------TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCCC
T ss_pred --------CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCcC
Confidence 6899999999999999999999999999999999999999999999999996
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=5.9e-34 Score=255.93 Aligned_cols=173 Identities=21% Similarity=0.249 Sum_probs=137.0
Q ss_pred EEEeecCCCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCC-CCCccccceeeecceeecCCccHHHHHHHHHHHHhhC
Q 023053 77 TEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSK-TGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTF 155 (288)
Q Consensus 77 ve~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~-~g~~~~~~~R~s~~~~l~~~~d~v~~~I~~ri~~~~~ 155 (288)
-|-+-..+.+++|+||||++||++||+++++. .+.++. +++..+..+|+|. ++.. ++++++.|.+||.++++
T Consensus 12 ~~~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~----~~~dg~~t~g~~~~~vr~n~--~l~~-d~~~~~~l~~~i~~~l~ 84 (243)
T 3dkq_A 12 HENLYFQGMLIEIPNVFSKQEVSHLREQLDAR----RWIDGNQTSGAMATTRKRNQ--QLDK-DDPVAVALGQQIMDRLL 84 (243)
T ss_dssp --CCCCBTTBEEECCSSCHHHHHHHHHHHHTS----CCEEECCCSSBSSCCCEEEE--ECCT-TCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCEEEECCCCCHHHHHHHHHHHhhC----CCccCcccCCCccccceeee--EECC-CCHHHHHHHHHHHHHHc
Confidence 35567889999999999999999999999753 233322 3334566788885 4443 46899999999999876
Q ss_pred CC--------CCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecC--CCCCceeeecCCCcccccccc
Q 023053 156 IP--------MEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSD--VEEGGETVFPAANANFTSVRW 225 (288)
Q Consensus 156 lp--------~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLND--v~eGGeT~Fp~~~~~~s~~~~ 225 (288)
.. ....|++||+||++|++|++|+|++..... ..+.+|.+|+++|||| +++||||+|+...
T Consensus 85 ~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~-~~~~~r~~T~~lYLndp~~~~GGetvf~~~~-------- 155 (243)
T 3dkq_A 85 AHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTP-DGMIRTDLSATLFLSEPENYQGGELVIQDTY-------- 155 (243)
T ss_dssp TCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEET-TEEEECCEEEEEECSCGGGEEECCEEEEETT--------
T ss_pred cCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCC-CccccceEEEEEEeCCCCCCCCceEEEeeCC--------
Confidence 54 133578999999999999999999865311 0123689999999999 6799999999742
Q ss_pred cccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeee
Q 023053 226 WNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHV 283 (288)
Q Consensus 226 ~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 283 (288)
....|+|++|++|+|++ .++|+||||++|+||++++|++.
T Consensus 156 ---------~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 156 ---------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp ---------EEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEEEEE
T ss_pred ---------CcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEehhh
Confidence 25789999999999985 68999999999999999999995
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.92 E-value=3.3e-24 Score=193.12 Aligned_cols=171 Identities=20% Similarity=0.275 Sum_probs=126.1
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcC-----cCccceeeeCCCCCccccceeeecceeecCCcc--H----HHHHHHHHHHH
Q 023053 84 PRAFVYHNFLSKAECEYLIDLAKP-----YMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQD--R----IIRGIEKRIAD 152 (288)
Q Consensus 84 P~i~vi~nfLs~eEC~~Li~~a~~-----~l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~d--~----v~~~I~~ri~~ 152 (288)
+.+++++|||+++||+.|++.++. .+.++.+... ......++|++..+|++..+. + +.+.+++.+..
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ 103 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRH 103 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHHH
Confidence 457899999999999999999875 3566666542 234567899999999987432 2 33444443333
Q ss_pred hhC-CCCC---CCCceEEeecCC-CCccccCccccccccccCCCCceEEEEEEeecCC----CCCceeeecCCCcccccc
Q 023053 153 FTF-IPME---HGEGIQVLHYEV-GQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDV----EEGGETVFPAANANFTSV 223 (288)
Q Consensus 153 ~~~-lp~~---~~E~lqv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv----~eGGeT~Fp~~~~~~s~~ 223 (288)
+.. +... ..+.+|+.+|.+ |++|.+|.|... +.+|.+|+++||||. +.||+|.|.....
T Consensus 104 ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~----- 171 (247)
T 2hbt_A 104 CNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK----- 171 (247)
T ss_dssp TTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC-----
T ss_pred HhhhcCcccccccceEEEEEecCCCCcccccccCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC-----
Confidence 222 1111 125699999996 999999999831 357999999999994 4699998764311
Q ss_pred cccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeeccc
Q 023053 224 RWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 286 (288)
Q Consensus 224 ~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~ 286 (288)
.....|.|+.|++|+|++ +..++|+++|+ .|.||+++.||+.++.
T Consensus 172 ----------~~~~~v~P~~grlv~F~s-------~~~~~H~V~p~-~~~R~sit~W~~~~~~ 216 (247)
T 2hbt_A 172 ----------AQFADIEPKFDRLLFFWS-------DRRNPHEVQPA-YATRYAITVWYFDADE 216 (247)
T ss_dssp ----------SSCEEECCBTTEEEEEEC-------STTCCEEECCB-SSCEEEEEEEEEEHHH
T ss_pred ----------CceEEEEcCCCEEEEEec-------CCCceeeeccC-CCEEEEEEEEEcCCch
Confidence 134789999999999986 23489999996 6899999999998764
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.13 E-value=3e-10 Score=112.34 Aligned_cols=116 Identities=18% Similarity=0.248 Sum_probs=85.7
Q ss_pred HHHHHHHhhCC-CCC-CCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCC------CCCceeeecCCC
Q 023053 146 IEKRIADFTFI-PME-HGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDV------EEGGETVFPAAN 217 (288)
Q Consensus 146 I~~ri~~~~~l-p~~-~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv------~eGGeT~Fp~~~ 217 (288)
..+-+.+++|+ +.. ..-.+++.+|.+|++|.+|.|.+ +.|.+|+++|||+. +.||++.+....
T Consensus 106 Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d 176 (633)
T 3kt7_A 106 YRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFPSI 176 (633)
T ss_dssp HHHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECCEE
T ss_pred HHHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEecCC
Confidence 34556677888 332 23469999999999999999954 24999999999983 369999987642
Q ss_pred cccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc-cceEEEEEEeeeecc
Q 023053 218 ANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI-RGNKWSATKWMHVHE 285 (288)
Q Consensus 218 ~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~W~~~~~ 285 (288)
.+. .| . ......|.|+.|++++|.+. +..++|++.||. ...|+++++|||.+.
T Consensus 177 ~~~--~P----~---~d~~~~I~P~fNrLV~F~vs------p~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 177 LPN--VP----H---SDPSAKLVPQFNQIAFFKVL------PGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp ETT--EE----C---SSCSEEECCCTTEEEEEECC------TTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred CcC--CC----C---CCceEEEecCCCeEEEEEcC------CCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 100 00 0 01356899999999999851 027999999998 458999999999864
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.67 E-value=2e-07 Score=81.78 Aligned_cols=101 Identities=18% Similarity=0.050 Sum_probs=70.5
Q ss_pred ceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccc-cccccc-cccccCCCCeEEe
Q 023053 163 GIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFT-SVRWWN-ELSECGKQGLSVK 240 (288)
Q Consensus 163 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s-~~~~~~-~~~~c~~~~~~V~ 240 (288)
..-+..|.+|+++.+|.|. ++.+|.++|||..+.||++.|........ ..+... +...-...-..|+
T Consensus 104 ~~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~ 172 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVA 172 (216)
T ss_dssp EEEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEEC
T ss_pred eEEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEec
Confidence 4557899999999999882 37899999999988999999976421100 000000 0000001124899
Q ss_pred cCCCcEEEEecCCCCCCCCCCCccccCCCcc-ceEEEEEEeeee
Q 023053 241 PKRGDALLFWSMRPDATLDPSSLHGGCPVIR-GNKWSATKWMHV 283 (288)
Q Consensus 241 Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~W~~~ 283 (288)
|+.|++|+|+| ...|++.|... ++|+++..-+..
T Consensus 173 P~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~~~ 207 (216)
T 2rg4_A 173 PKVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNYAW 207 (216)
T ss_dssp CCTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEEEC
T ss_pred CCCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEeec
Confidence 99999999996 69999999876 588888765543
No 7
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.96 E-value=0.00025 Score=64.39 Aligned_cols=185 Identities=14% Similarity=0.149 Sum_probs=93.6
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCcCccc-----ee-eeCC-CCCcc-ccceeeecceeecCCccHHHH------HHHHHH
Q 023053 85 RAFVYHNFLSKAECEYLIDLAKPYMVKS-----TV-VDSK-TGQSK-DSRVRTSSGTFLKRGQDRIIR------GIEKRI 150 (288)
Q Consensus 85 ~i~vi~nfLs~eEC~~Li~~a~~~l~~s-----~v-~~~~-~g~~~-~~~~R~s~~~~l~~~~d~v~~------~I~~ri 150 (288)
..+++++||+++||+.|.+.++..+... .. .... .+... ....+.-..+. .-..++.+. +|.+.+
T Consensus 35 Gyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~p~l~~~~ 113 (308)
T 2a1x_A 35 GFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQ-DFQEDKELFRYCTLPEILKYV 113 (308)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----EECCEEE-CCTTSHHHHHHHHCHHHHHHH
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHHHHhhhh-hhhhCHHHHHHHhCHHHHHHH
Confidence 4579999999999999999876532111 00 0000 00000 00001000010 001233322 344555
Q ss_pred HHhhCCCCCCCCceEEeecCC-CCc---cccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCccccc--
Q 023053 151 ADFTFIPMEHGEGIQVLHYEV-GQK---YDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFTS-- 222 (288)
Q Consensus 151 ~~~~~lp~~~~E~lqv~rY~~-G~~---y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s~-- 222 (288)
+++.|-+........+.+... |+. ..||.|...-. .....+.+|+.++|.|+. ++|.|.| |.... ...
T Consensus 114 ~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~---~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~-~~~~~ 189 (308)
T 2a1x_A 114 ECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFP---FRPSDLIVCAWTAMEHISRNNGCLVVLPGTHK-GSLKP 189 (308)
T ss_dssp HHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCC---EECGGGEEEEEEESSCBCTTBTCEEECTTGGG-SCCCC
T ss_pred HHhcCCCcceecceEEEcCCCCCCCccCCCCccCCcccc---CCCCCCeEEEEEEeeccCCCCCcEEEEcCCCC-Ccccc
Confidence 666663321111122333332 332 47999974311 111246899999999985 6677776 43211 100
Q ss_pred --cccccc--------cccc--CCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc-ceEEEEEEeeee
Q 023053 223 --VRWWNE--------LSEC--GKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR-GNKWSATKWMHV 283 (288)
Q Consensus 223 --~~~~~~--------~~~c--~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~W~~~ 283 (288)
-..|.. ..+. ....+.+.-++|++++|. ..++|++.|-.+ ..|+++...+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 190 HDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISCHFAS 254 (308)
T ss_dssp CCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEEEEEE
T ss_pred ccccccccCccccccCCccccccCCeEEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEEEEEC
Confidence 011210 1111 124577888999999995 589999999866 478887765544
No 8
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.91 E-value=4.2e-05 Score=68.63 Aligned_cols=99 Identities=19% Similarity=0.145 Sum_probs=62.5
Q ss_pred CCccccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCcccccccccc------------ccc-c-c-CC
Q 023053 172 GQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFTSVRWWN------------ELS-E-C-GK 234 (288)
Q Consensus 172 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s~~~~~~------------~~~-~-c-~~ 234 (288)
|....||.|.... ....+.+|+.++|.|+. +.|.|.| |...........+. .+. + . ..
T Consensus 134 g~~~~wHqD~~~~-----~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (288)
T 2rdq_A 134 HYLTPFHQDGFYI-----GPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDE 208 (288)
T ss_dssp TTSCCSBCHHHHS-----CSCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTS
T ss_pred CCCcCcccccccc-----CCCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccC
Confidence 4567899998542 12346899999999985 5677766 43321100000000 000 0 0 11
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc----eEEEEEEeeeec
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG----NKWSATKWMHVH 284 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G----~K~i~~~W~~~~ 284 (288)
..+.+.-++|+++||. ..++|++.|-.+. .+|++..|+...
T Consensus 209 ~~v~~~~~aGdv~lf~---------~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 209 HLLHSPMEPGDILLFH---------AHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CEECCCCCTTCEEEEE---------TTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ceeecccCCCCEEEEe---------CCceecCCCCCCCCccceEEEEEEEEecC
Confidence 2355677999999996 5899999999876 378998888654
No 9
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.84 E-value=0.0003 Score=63.92 Aligned_cols=184 Identities=12% Similarity=0.108 Sum_probs=94.1
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCcCcc--ceeeeCCCCCcccc-ceeeecceeecCCccHHH------HHHHHHHHHhhC
Q 023053 85 RAFVYHNFLSKAECEYLIDLAKPYMVK--STVVDSKTGQSKDS-RVRTSSGTFLKRGQDRII------RGIEKRIADFTF 155 (288)
Q Consensus 85 ~i~vi~nfLs~eEC~~Li~~a~~~l~~--s~v~~~~~g~~~~~-~~R~s~~~~l~~~~d~v~------~~I~~ri~~~~~ 155 (288)
..++++++|+++||+.+.+.....+.. ..+... +..... ..|.....+. .++.+ ..|.+.++++.|
T Consensus 22 Gyvvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~l~~~~~~llG 96 (313)
T 2fct_A 22 GFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD--LDAISGGTNIANYDRHL---DDDFLASHICRPEICDRVESILG 96 (313)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCC--CCC----CGGGGBCGGG---TCHHHHHHTTCHHHHHHHHHHHC
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHhccccccccc--ccccCCccchhcccccc---ccHHHHHHHcChHHHHHHHHHcC
Confidence 457999999999999998776533211 111111 000000 0111110010 12222 234555666676
Q ss_pred CCCCCCCceEEeecCCCCccccCcccccccccc-------CCCCc-eEEEEEEeecCCC-CCceeee-cCCCcccc--c-
Q 023053 156 IPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNT-------KNGGQ-RMATLLMYLSDVE-EGGETVF-PAANANFT--S- 222 (288)
Q Consensus 156 lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~-------~~~~~-R~~T~liYLNDv~-eGGeT~F-p~~~~~~s--~- 222 (288)
-+.-.....-+.+...++...||.|...-.... .+... +.+|+.++|.|+. +.|.|.| |....... .
T Consensus 97 ~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~ 176 (313)
T 2fct_A 97 PNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDET 176 (313)
T ss_dssp SCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBCTT
T ss_pred CCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCccccc
Confidence 322111112233444344579999975311000 00011 6799999999985 5677766 43321100 0
Q ss_pred -----c----------cc------c--ccccc------cCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc--c
Q 023053 223 -----V----------RW------W--NELSE------CGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI--R 271 (288)
Q Consensus 223 -----~----------~~------~--~~~~~------c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~--~ 271 (288)
. +. + .++.. -....+.+.-++|+++||. +.++|++.|.. +
T Consensus 177 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~l~H~s~~N~~ss 247 (313)
T 2fct_A 177 KRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPHSGES 247 (313)
T ss_dssp SCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEE---------TTSEEEECCBCSSS
T ss_pred cccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEe---------CCceeeCCCCCCCC
Confidence 0 00 0 00100 1123578889999999996 58999999998 4
Q ss_pred c-eEEEEEEeee
Q 023053 272 G-NKWSATKWMH 282 (288)
Q Consensus 272 G-~K~i~~~W~~ 282 (288)
. .|+++..-+.
T Consensus 248 ~~~R~a~~~~y~ 259 (313)
T 2fct_A 248 QEMRMGFASRYV 259 (313)
T ss_dssp SSCEEEEEEEEE
T ss_pred CCceEEEEEEEE
Confidence 4 6777664443
No 10
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.42 E-value=0.00087 Score=60.11 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=58.9
Q ss_pred CCccccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCcccccc-----------cc--c----cccccc
Q 023053 172 GQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFTSV-----------RW--W----NELSEC 232 (288)
Q Consensus 172 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s~~-----------~~--~----~~~~~c 232 (288)
|+...||.|...-. .....+.+|+.++|.|+. ++|.|.| |.... .... +. + .++.
T Consensus 150 ~~~~~wHqD~~~~~---~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 223 (291)
T 2opw_A 150 GGEVSPHQDASFLY---TEPLGRVLGVWIAVEDATLENGCLWFIPGSHT-SGVSRRMVRAPVGSAPGTSFLGSEPARD-- 223 (291)
T ss_dssp BCCEEEECGGGTSC---EESSSCEEEEEEESSCBCTTTTCEEEETTCSS-SCCSEEEEECC----CCEEEEECCCCCC--
T ss_pred CCCcCCeeCCcccc---cCCCCceEEEEEEcccCCCCCCCEEEECCccC-CCcccccccCCCCCCCcceeeccccCCC--
Confidence 34578999975311 111227899999999985 5677766 43321 1000 00 0 0111
Q ss_pred CCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc-eEEEEEEee
Q 023053 233 GKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG-NKWSATKWM 281 (288)
Q Consensus 233 ~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W~ 281 (288)
....+.+.-++|++++|. ..++|++.|..+. .|++++.-+
T Consensus 224 ~~~~v~~~~~aGd~~~f~---------~~~~H~s~~N~s~~~R~~~~~~~ 264 (291)
T 2opw_A 224 NSLFVPTPVQRGALVLIH---------GEVVHKSKQNLSDRSRQAYTFHL 264 (291)
T ss_dssp GGGCEEECBCTTCEEEEE---------TTCEEEECCBCSSSCCCEEEEEE
T ss_pred cCCeeecccCCCcEEEEc---------CCceecCCCCCCCCceEEEEEEE
Confidence 123577889999999996 5899999998764 566655433
No 11
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.32 E-value=0.00032 Score=64.31 Aligned_cols=181 Identities=15% Similarity=0.120 Sum_probs=92.4
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCcCccc-------eeeeCCCCCccccceeeecceeecCCccHHHH------HHHHHHH
Q 023053 85 RAFVYHNFLSKAECEYLIDLAKPYMVKS-------TVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIR------GIEKRIA 151 (288)
Q Consensus 85 ~i~vi~nfLs~eEC~~Li~~a~~~l~~s-------~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~------~I~~ri~ 151 (288)
..++++|+|+++||+.|.+.++..+... .+... ....+|.-...+. .++.+. +|...++
T Consensus 47 Gyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~-----~~~~~r~~~~~~~---~~~~f~~l~~~p~l~~i~~ 118 (310)
T 3emr_A 47 GFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREP-----ESNDIRSIFHVHQ---DDNYFQDVANDKRILDIVR 118 (310)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECT-----TTCCEEEEECHHH---HCHHHHHHHTCHHHHHHHH
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecC-----CCcceeEEeehhh---ccHHHHHHHhChHHHHHHH
Confidence 4578999999999999999886532211 11110 0112332211111 123332 3344455
Q ss_pred HhhCCCCCCCCceEEeecC-CCCccccCccccccccccCCCCceEEEEEEeecCCC-CCceeee-cCCCcccc----ccc
Q 023053 152 DFTFIPMEHGEGIQVLHYE-VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE-EGGETVF-PAANANFT----SVR 224 (288)
Q Consensus 152 ~~~~lp~~~~E~lqv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~-eGGeT~F-p~~~~~~s----~~~ 224 (288)
++.|-........-+.+-. .|+...||.|...-.........+.+++.++|.|+. +.|.|.| |....... ..+
T Consensus 119 ~llG~~~~l~~s~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p 198 (310)
T 3emr_A 119 HLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETP 198 (310)
T ss_dssp HHHTSCEEEEEEEEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC---
T ss_pred HHcCCceEEEeeEEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCccccccccc
Confidence 5666332111000111222 356788999964211000111257899999999985 5677776 43221100 000
Q ss_pred --cccc-cc-------c-------cCC-C-CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc-eEEEEEEeee
Q 023053 225 --WWNE-LS-------E-------CGK-Q-GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG-NKWSATKWMH 282 (288)
Q Consensus 225 --~~~~-~~-------~-------c~~-~-~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W~~ 282 (288)
.|.+ +. + ..+ . -+.+.-++|++++|. ..++|++.+-.+. .|+++..-+.
T Consensus 199 ~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~---------~~~~H~s~~N~S~~~R~~l~~~y~ 267 (310)
T 3emr_A 199 DNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFE---------SNTMHGSTSNITPYPRNNLFMVYN 267 (310)
T ss_dssp --------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEE---------TTCCEEECCCCSSCCCCEEEEEEE
T ss_pred ccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEe---------CCceecCCCCCCCCCeEEEEEEEe
Confidence 0100 00 0 000 1 355677899999996 5899999998765 5666554443
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=97.27 E-value=0.003 Score=55.81 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=101.0
Q ss_pred cccCceeEEEeecC-CCEEEEcCCCCHHHHHHHHHHhcC--cCccceeeeCCCCCccccceeeecceeecC---------
Q 023053 70 EEKGEQWTEIVAWE-PRAFVYHNFLSKAECEYLIDLAKP--YMVKSTVVDSKTGQSKDSRVRTSSGTFLKR--------- 137 (288)
Q Consensus 70 ~~~~~~~ve~ls~~-P~i~vi~nfLs~eEC~~Li~~a~~--~l~~s~v~~~~~g~~~~~~~R~s~~~~l~~--------- 137 (288)
++++...+..+... |.+.+++|||+++|.+.|++.... .+....... .|.......+++ |+..
T Consensus 25 ~~~g~~~~~~~p~~i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~--~g~~~~~~R~~~---~~g~~~Y~Ys~~~ 99 (238)
T 2iuw_A 25 DREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR--EDITYQQPRLTA---WYGELPYTYSRIT 99 (238)
T ss_dssp CSSEEEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES--SSCEEECSSEEE---EEECCCTTSCHHH
T ss_pred cCCcceeeecCCCCCCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceec--CCcccccCCeeE---EcCCCccccCCcc
Confidence 44554444322221 358999999999999999988632 122221110 122111111111 2210
Q ss_pred -----CccHHHHHHHHHHHHhhCCCCCCCCceEEeecCCCC-ccccCccccccccccCCCCceEEEEEEeecCCCCCcee
Q 023053 138 -----GQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQ-KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGET 211 (288)
Q Consensus 138 -----~~d~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT 211 (288)
.-.+.+..|.++++++.+.+ .+..-+..|.+|+ .-.+|.|.... + ..+..++|+-+ |+..
T Consensus 100 ~~~~p~wp~~l~~l~~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~~~-~---~~~~~IaslSL-------G~~~ 165 (238)
T 2iuw_A 100 MEPNPHWHPVLRTLKNRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDEPS-L---GRCPIIASLSF-------GATR 165 (238)
T ss_dssp HCCBSSCCHHHHHHHHHHHHHHSCC---CCEEEEEEECSTTCCEEEECCCCGG-G---CSSCCEEEEEE-------ESCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCC---CCEEEEEEECCCCCceeCCcCChhh-c---CCCCcEEEEEC-------CCCE
Confidence 01356777888888877654 3467899999997 99999997421 1 11356777766 6666
Q ss_pred eecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc--cceEEEEEE
Q 023053 212 VFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI--RGNKWSATK 279 (288)
Q Consensus 212 ~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~ 279 (288)
+|-.-........ . ..+....+.|.-..|++|++.- .......|++.+.. .|.|..+|.
T Consensus 166 ~f~f~~~~~~~~~--~--~~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLTf 226 (238)
T 2iuw_A 166 TFEMRKKPPPEEN--G--DYTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLTF 226 (238)
T ss_dssp EEEEEECCC------------CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEEE
T ss_pred EEEEeccCCcccc--C--cccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEEe
Confidence 6543211000000 0 0001235789999999999963 11123359888763 567777763
No 13
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=97.00 E-value=0.0043 Score=56.90 Aligned_cols=179 Identities=11% Similarity=0.140 Sum_probs=90.4
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCcCcc--ceeeeCCCCCccccceeeecceeecCCccHHHH------HHHHHHHHhhCCC
Q 023053 86 AFVYHNFLSKAECEYLIDLAKPYMVK--STVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIR------GIEKRIADFTFIP 157 (288)
Q Consensus 86 i~vi~nfLs~eEC~~Li~~a~~~l~~--s~v~~~~~g~~~~~~~R~s~~~~l~~~~d~v~~------~I~~ri~~~~~lp 157 (288)
.++++++|+++||+.+.+..+..+.. ..+.....|. .+|.....+. .++.+. .|...++++.|-+
T Consensus 25 yv~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~~~~g~----~~~~~~~~~~---~~~~f~~l~~~p~l~~~~~~llG~~ 97 (319)
T 3gja_A 25 YIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGK----ANISNYDRHL---DIDLLAEHIMRPEIVDRVGSLIGRN 97 (319)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHCCTTCSSCSCSSH----HHHTTTTGGG---TCHHHHHHHHCHHHHHHHHHHHCSS
T ss_pred EEECcCCCCHHHHHHHHHHHHHHhhcCccccccCCCcc----chhhhhhhcc---cCHHHHHHHcChHHHHHHHHHcCCc
Confidence 56899999999999998887653211 1111110111 1221111111 123332 3445556666633
Q ss_pred CCCCCceEEeecCCCCccccCcccccccccc------CCCC--c---eEEEEEEeecCCC-CCceeee-cCCCcccccc-
Q 023053 158 MEHGEGIQVLHYEVGQKYDAHYDYFLDEFNT------KNGG--Q---RMATLLMYLSDVE-EGGETVF-PAANANFTSV- 223 (288)
Q Consensus 158 ~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~------~~~~--~---R~~T~liYLNDv~-eGGeT~F-p~~~~~~s~~- 223 (288)
.-.....-+.++..++...||.|...-.... .... . +.+|+.++|.|+. +.|.|.| |.... ....
T Consensus 98 ~~~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~-~~~~~ 176 (319)
T 3gja_A 98 LLCWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHT-SMNYD 176 (319)
T ss_dssp EEEEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC----CEEC
T ss_pred eEEeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCcc-CcccC
Confidence 2111111234444333478999964321000 0000 1 3599999999985 5577766 43221 1100
Q ss_pred ----cccc----------------------ccc------ccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc-
Q 023053 224 ----RWWN----------------------ELS------ECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI- 270 (288)
Q Consensus 224 ----~~~~----------------------~~~------~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~- 270 (288)
..|+ ++. ......+.+.-++|++|||. ..++|++.|-.
T Consensus 177 ~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~~~H~s~~N~~ 247 (319)
T 3gja_A 177 ESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFW---------SNTMHASLPHTG 247 (319)
T ss_dssp CC------------------------------------------CCBCCBCTTEEEEEE---------TTSCEEECCCCS
T ss_pred cccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEc---------CCccccCCCCCC
Confidence 0010 000 00123455677899999996 58999999998
Q ss_pred -cc-eEEEEEEee
Q 023053 271 -RG-NKWSATKWM 281 (288)
Q Consensus 271 -~G-~K~i~~~W~ 281 (288)
++ .|+++..-+
T Consensus 248 ts~~~R~a~~~~y 260 (319)
T 3gja_A 248 SKTDYRMGFAARY 260 (319)
T ss_dssp CTTCCEEEEEEEE
T ss_pred CCCCcEEEEEEEE
Confidence 54 677665443
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=96.93 E-value=0.014 Score=50.29 Aligned_cols=176 Identities=13% Similarity=0.057 Sum_probs=100.4
Q ss_pred EEeecCCCEEEEcCCCCHHHHHHHHHHhcC--cC---ccceeeeCCCCCcccc------------ceeeecceeecCCcc
Q 023053 78 EIVAWEPRAFVYHNFLSKAECEYLIDLAKP--YM---VKSTVVDSKTGQSKDS------------RVRTSSGTFLKRGQD 140 (288)
Q Consensus 78 e~ls~~P~i~vi~nfLs~eEC~~Li~~a~~--~l---~~s~v~~~~~g~~~~~------------~~R~s~~~~l~~~~d 140 (288)
+.|-.+-..+.|++||+++|+++|.+.... .+ +...+.- .|+.... .++-|........-.
T Consensus 4 ~~~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~--~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp 81 (204)
T 3s57_A 4 RHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV--FGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWI 81 (204)
T ss_dssp EEEEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE--TTEEEECSSEEEEEECTTCCEEETTEEECCEECC
T ss_pred ceeeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE--CCeEeccCcEEEEECCCCCCcccCCCcccCCCCC
Confidence 344566667889999999999999887632 23 2112211 1221111 122221111111114
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCceEEeecCCCC-ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcc
Q 023053 141 RIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQ-KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANAN 219 (288)
Q Consensus 141 ~v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~ 219 (288)
+.+..|.++++++++.+. ...-+..|.+|+ .-.+|.|.... -..+.-++|+-+ |+...|-.....
T Consensus 82 ~~L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~----~~~~~~IasvSL-------G~~~~f~~~~~~ 147 (204)
T 3s57_A 82 PVLERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDERE----LAPGSPIASVSF-------GASRDFVFRHKD 147 (204)
T ss_dssp HHHHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTT----BCTTCCEEEEEE-------ESCEEEEEEEGG
T ss_pred HHHHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhh----ccCCCcEEEEEC-------CCceEEEEEEcC
Confidence 688889999988877543 457899999999 89999997421 112445677665 666666432110
Q ss_pred cccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc--cceEEEEEE
Q 023053 220 FTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI--RGNKWSATK 279 (288)
Q Consensus 220 ~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~ 279 (288)
..... .......+.+.-..|+++++.. ..-....|++.+.. .|.|+.+|-
T Consensus 148 ~~~~~-----~~~~~~~~~~~L~~GsllvM~g-----~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 148 SRGKS-----PSRRVAVVRLPLAHGSLLMMNH-----PTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp GCSSS-----CSCCCCCEEEEECTTEEEEEET-----THHHHEEEEECCCTTCCSCEEEEEE
T ss_pred CCccc-----cccCCceEEEECCCCCEEEECc-----hhhheeEeeccccCCCCCCEEEEEe
Confidence 00000 0001135789999999999962 11122357776664 267877764
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=96.88 E-value=0.015 Score=50.43 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccc
Q 023053 142 IIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFT 221 (288)
Q Consensus 142 v~~~I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s 221 (288)
.+..+.+++....+++....+..-+..|.+|+.-.+|.|..... -+..++|+.+ |++.+|-......
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~-----~~~pI~svSL-------G~~~~f~f~~~~~- 151 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPD-----LRAPIVSVSL-------GLPAIFQFGGLKR- 151 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSC-----TTSCEEEEEE-------ESCEEEEECCSST-
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccc-----cCCCEEEEEC-------CCCeEEEEecccC-
Confidence 67778888888776643334568899999999999999952211 1245788776 7777775432110
Q ss_pred cccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc-------ceEEEEEE
Q 023053 222 SVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR-------GNKWSATK 279 (288)
Q Consensus 222 ~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~-------G~K~i~~~ 279 (288)
......|.-+.|+++++.. ..- ...|++.+... +.|+.+|-
T Consensus 152 -----------~~~~~~i~L~~GsllvM~G-----~~r-~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 152 -----------NDPLKRLLLEHGDVVVWGG-----ESR-LFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp -----------TSCCEEEEECTTCEEEECG-----GGT-TCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred -----------CCceEEEECCCCCEEEECc-----hHH-ceEeccCcccCCcCCCCCCCEEEEEe
Confidence 0135789999999999952 111 25799988876 34777664
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=96.58 E-value=0.015 Score=54.12 Aligned_cols=139 Identities=17% Similarity=0.148 Sum_probs=77.7
Q ss_pred eecCCCEEEEcCCCCHHHHHHHHHHhcCcCccceeeeCCCCCcccc---------ceeeeccee-----ecCCccHHHHH
Q 023053 80 VAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDS---------RVRTSSGTF-----LKRGQDRIIRG 145 (288)
Q Consensus 80 ls~~P~i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~~g~~~~~---------~~R~s~~~~-----l~~~~d~v~~~ 145 (288)
.+.-|.+.+++||||++|.+.|++...-.-.+..+. |....+ .++-+.... +...-.+.+..
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~----~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~ 182 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQN----SQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICES 182 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcccCCcccccc----CcccccCceEEEECCcccccccccccCCCCCcCcCHHHHH
Confidence 346678999999999999999987664211111110 111111 111111000 01111345667
Q ss_pred HHHHHHHhhCCCCCCCCceEEeecCCCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccc
Q 023053 146 IEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRW 225 (288)
Q Consensus 146 I~~ri~~~~~lp~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~ 225 (288)
|.+|+.+. ++.........+..|.+|+.-.+|.|.... .+..++|+-+ |+..+|-....
T Consensus 183 l~~r~~~~-~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~------~~~~I~slSL-------G~~~~f~f~~~------- 241 (345)
T 3tht_A 183 FLEKWLRK-GYIKHKPDQMTINQYEPGQGIPAHIDTHSA------FEDEIVSLSL-------GSEIVMDFKHP------- 241 (345)
T ss_dssp HHHHHHHH-TSCSSCCSEEEEEEECTTCCEEEECCCTTT------BCSCEEEEEE-------SSCEEEEEECT-------
T ss_pred HHHHHHhc-ccCCCCCCEEEEEEecCCCCEeeccCCchh------cCCeEEEEEC-------CCceeEEEccC-------
Confidence 77777653 222223456889999999999999997532 2356777765 77777753211
Q ss_pred cccccccCCCCeEEecCCCcEEEEe
Q 023053 226 WNELSECGKQGLSVKPKRGDALLFW 250 (288)
Q Consensus 226 ~~~~~~c~~~~~~V~Pk~G~allF~ 250 (288)
+...+.|.-..|+++++.
T Consensus 242 -------~~~~~~l~L~~gsLlvM~ 259 (345)
T 3tht_A 242 -------DGIAVPVMLPRRSLLVMT 259 (345)
T ss_dssp -------TSCEEEEEECTTEEEEEC
T ss_pred -------CCceEEEEcCCCcEEEEC
Confidence 012467888899999985
No 17
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=93.47 E-value=0.088 Score=48.12 Aligned_cols=126 Identities=9% Similarity=-0.040 Sum_probs=64.9
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCcCccceeeeCC-C-CCccccceeeeccee---ecCCccHHHHHHHHHHHHhhCCCCCC
Q 023053 86 AFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSK-T-GQSKDSRVRTSSGTF---LKRGQDRIIRGIEKRIADFTFIPMEH 160 (288)
Q Consensus 86 i~vi~nfLs~eEC~~Li~~a~~~l~~s~v~~~~-~-g~~~~~~~R~s~~~~---l~~~~d~v~~~I~~ri~~~~~lp~~~ 160 (288)
-.++.|++|+||.+.|++..+.....+.+.... + .......+|+....+ ....-..+..++..-+.+++|-..-
T Consensus 42 YLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h~~s~l~~rll~vl~~LlG~el~- 120 (344)
T 3nnf_A 42 YCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLM- 120 (344)
T ss_dssp EEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHHHHHHHHGGGHHHHHHHHTSCEE-
T ss_pred eEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHHHHHHHHHHHHHHHHHHhCCcee-
Confidence 468999999999999999987542222211000 0 001123355332111 0000013344444444555554321
Q ss_pred CCceEEeecCCCC-ccccCccccccccccCCCCceEEEEEEeecCCC--CCceeee-c
Q 023053 161 GEGIQVLHYEVGQ-KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE--EGGETVF-P 214 (288)
Q Consensus 161 ~E~lqv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~--eGGeT~F-p 214 (288)
.-.-+...+.+|+ .|.||.|...-. ......|-+|+-+=|.+.. ++|...+ |
T Consensus 121 i~qs~~fe~kPG~KGFpWH~D~~~F~--~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP 176 (344)
T 3nnf_A 121 IMHNALFSVEPNHKGLPWHVGVGSFS--FTKTEDFGASIWIPLDKITKEHRGGMQYVS 176 (344)
T ss_dssp EEEEEEEEECBTCCBSCSBCTTTTTT--TBCTTSCEEEEEEESSCBCTTTBCSEEEEC
T ss_pred eeecceEeeCCCCCCCCceecccccc--cccCCCCeEEEEEECCCCCccCCCceEEec
Confidence 1123445667765 599999942101 1222347888888898765 3555544 5
No 18
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=88.06 E-value=2.8 Score=38.03 Aligned_cols=89 Identities=20% Similarity=0.190 Sum_probs=58.0
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. ....+|+|.. .+|+|+. |...||==+... ...
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~v~GLQV~~~------------------g~W 203 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG------------GIILLFQ--DDKVSGLQLLKD------------------GQW 203 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS------------SEEEEEE--SSSCCCEEEEET------------------TEE
T ss_pred eeEEEecCCCcccccccccccccCCC------------ceEEEEe--cCCCCeeeEeeC------------------CeE
Confidence 4889999863 2367888853 5788854 433456444432 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|+|..|..||--- ...|| .-..+.|++..-..++|+++.-+++-+
T Consensus 204 i~V~p~pgalvVNiGD~l~~~SnG-~~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 204 IDVPPMRHSIVVNLGDQLEVITNG-KYKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp EECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred EEcccCCCcEEEEhHHHHHHHhCC-eeecccceecCCCCCCceEEEEEecCC
Confidence 789999998887521 11222 236789999876667899988777543
No 19
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=82.01 E-value=3.9 Score=36.85 Aligned_cols=108 Identities=12% Similarity=0.098 Sum_probs=63.3
Q ss_pred HHHHHHHHhhCC----CCC----CCCceEEeecCCC---------C-ccccCccccccccccCCCCceEEEEEEeecCCC
Q 023053 145 GIEKRIADFTFI----PME----HGEGIQVLHYEVG---------Q-KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE 206 (288)
Q Consensus 145 ~I~~ri~~~~~l----p~~----~~E~lqv~rY~~G---------~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~ 206 (288)
.|.+.++..+|+ +.. ....+++.+|.+. + .-.+|+|+. .+|+|+. |..
T Consensus 132 ~ll~~la~~Lgl~~~~~~~~f~~~~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~ 197 (311)
T 1dcs_A 132 AVAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS------------MVTLIQQ--TPC 197 (311)
T ss_dssp HHHHHHHHHTTCCCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECS------------SEEEEEE--ECC
T ss_pred HHHHHHHHHcCCCCcCcHhHHhhcchhhheecCCCCCcccccCccccccccccCCC------------eEEEEec--CCC
Confidence 334444445677 421 1346889999752 1 267888853 5788865 312
Q ss_pred CCc--eeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCc-----cceEE
Q 023053 207 EGG--ETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVI-----RGNKW 275 (288)
Q Consensus 207 eGG--eT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~-----~G~K~ 275 (288)
.|| .+.... . ...+.|+|..|..||--- ...+|. -..+.|++.... ..+|+
T Consensus 198 v~G~~~LqV~~-~----------------g~W~~V~p~pg~lvVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~~~~~~R~ 259 (311)
T 1dcs_A 198 ANGFVSLQAEV-G----------------GAFTDLPYRPDAVLVFCGAIATLVTGGQ-VKAPRHHVAAPRRDQIAGSSRT 259 (311)
T ss_dssp TTCCCCEEEEE-T----------------TEEEECCCCTTCEEEEECHHHHHHTTSC-SCCCCEEECCC----CTTCCEE
T ss_pred CCCceeEEEEe-C----------------CEEEeCcCCCCeEEEEHHHHHHHHhCCc-ccCCCceEeCCCcccCCCCCeE
Confidence 344 244332 1 135789999999888521 122232 357899997654 45799
Q ss_pred EEEEeeeec
Q 023053 276 SATKWMHVH 284 (288)
Q Consensus 276 i~~~W~~~~ 284 (288)
++.-+++-+
T Consensus 260 Si~~F~~p~ 268 (311)
T 1dcs_A 260 SSVFFLRPN 268 (311)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCC
Confidence 988776543
No 20
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=81.99 E-value=9.8 Score=34.90 Aligned_cols=88 Identities=15% Similarity=0.111 Sum_probs=57.0
Q ss_pred ceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCC
Q 023053 163 GIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQG 236 (288)
Q Consensus 163 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~ 236 (288)
.+++.+|.+. ....+|+|+. .+|+|+. |. .||==++.. ...
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~~------------------g~W 257 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS------------ALTFILH--NM-VPGLQLFYE------------------GKW 257 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS------------SEEEEEE--CS-CCCEEEEET------------------TEE
T ss_pred eeeeeecCCCCCcccccCcCCccCCC------------eEEEEEE--cC-CCCeEEecC------------------CcE
Confidence 5889999853 2357788853 5788865 32 355444431 135
Q ss_pred eEEecCCCcEEEEec----CCCCCCCCCCCccccCCCccceEEEEEEeeeec
Q 023053 237 LSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIRGNKWSATKWMHVH 284 (288)
Q Consensus 237 ~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 284 (288)
+.|+|..|..||--- ...+| .-..+.|++......+|+++.-+++-+
T Consensus 258 i~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 258 VTAKCVPDSIVMHIGDTLEILSNG-KYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp EECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred EECcCCCCeEEEEeccHHHHhcCC-EeeccCceecCCCCCCEEEEEEeecCC
Confidence 789999999888631 11222 236789999765566899998877643
No 21
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=80.42 E-value=3.5 Score=36.45 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=47.8
Q ss_pred CceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEec-CCCcEEEEecCCCCCCCCCCCccccCCCc
Q 023053 192 GQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKP-KRGDALLFWSMRPDATLDPSSLHGGCPVI 270 (288)
Q Consensus 192 ~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~P-k~G~allF~n~~~~g~~D~~~lH~g~PV~ 270 (288)
..-.+.+++--+++. ||+|.....+. +....++- +.|+++++- |.+.+|.+.||.
T Consensus 170 ~d~v~v~lv~R~Ni~-GGet~I~~~~~---------------~~~~~~~l~~p~d~llv~--------D~~~~H~vTpI~ 225 (254)
T 3pl0_A 170 VDFVAVVFIGRQGVR-GGETRVFDAAG---------------PQGVRFTLEQPWTVLLLD--------DQQVIHESTPLL 225 (254)
T ss_dssp SSEEEEEEEEEESEE-ECCEEEEETTS---------------SEEEEECCCSTTCEEEEE--------TTTEEEEECCEE
T ss_pred CCEEEEEEecCCccc-cceEEEEcCCC---------------CccceeEecCCCcEEEEe--------CCcccCCCCccc
Confidence 346777777777775 89998765421 12233333 789999885 678999999997
Q ss_pred c---------ceEEEEEEeeeeccc
Q 023053 271 R---------GNKWSATKWMHVHEY 286 (288)
Q Consensus 271 ~---------G~K~i~~~W~~~~~~ 286 (288)
. |.+-++..=++-..|
T Consensus 226 ~~~~~~~~~~g~RDvlVvtf~~~~~ 250 (254)
T 3pl0_A 226 PLDPADPAVPAHRDTLVLTYRSGGF 250 (254)
T ss_dssp ESCTTCTTSCCEEEEEEEEEESSSC
T ss_pred cCCCCCCCCceEEEEEEEEecCCcc
Confidence 4 556666665555554
No 22
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=74.45 E-value=14 Score=33.14 Aligned_cols=106 Identities=23% Similarity=0.284 Sum_probs=61.8
Q ss_pred HHHHHHHHhhCCCCCC--------CCceEEeecCCC------CccccCccccccccccCCCCceEEEEEEeecCCCCCce
Q 023053 145 GIEKRIADFTFIPMEH--------GEGIQVLHYEVG------QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGE 210 (288)
Q Consensus 145 ~I~~ri~~~~~lp~~~--------~E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGe 210 (288)
.|.+.++..+|++... ...+++.+|.+. -...+|+|+. .+|+|+ .|. .||=
T Consensus 144 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~-v~GL 208 (312)
T 3oox_A 144 KVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN------------TITLLL--GAE-EGGL 208 (312)
T ss_dssp HHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS------------SEEEEE--CCT-TSCE
T ss_pred HHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc------------eEEEEe--EcC-cCce
Confidence 3444444455776421 235889999863 2346788853 578884 442 3553
Q ss_pred eeecCCCcccccccccccccccCCCCeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCc----cceEEEEEEeee
Q 023053 211 TVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVI----RGNKWSATKWMH 282 (288)
Q Consensus 211 T~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~W~~ 282 (288)
=+.... ...+.|+|..|.+||--- ...+| .-..+.|++.... ...||++.-+++
T Consensus 209 qV~~~~-----------------g~W~~V~p~pg~~vVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~~~~~R~Sia~F~~ 270 (312)
T 3oox_A 209 EVLDRD-----------------GQWLPINPPPGCLVINIGDMLERLTNN-VLPSTVHRVVNPPPERRGVPRYSTPFFLH 270 (312)
T ss_dssp EEECTT-----------------SCEEECCCCSSCEEEEECHHHHHHTTT-SSCCCCEEECCCCGGGTTSCEEECCEEEC
T ss_pred EEECCC-----------------CcEEECCCCCCeEEEEhHHHHHHHhCC-eecCCCceEeCCCccCCCCCEEEEEEEec
Confidence 343321 136789999999888521 11222 2357899985432 236998877765
Q ss_pred e
Q 023053 283 V 283 (288)
Q Consensus 283 ~ 283 (288)
-
T Consensus 271 P 271 (312)
T 3oox_A 271 F 271 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 23
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=70.05 E-value=13 Score=33.57 Aligned_cols=108 Identities=13% Similarity=0.026 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhhCCCCC--------CCCceE--EeecC------C----------CCccccCccccccccccCCCCceE
Q 023053 142 IIRGIEKRIADFTFIPME--------HGEGIQ--VLHYE------V----------GQKYDAHYDYFLDEFNTKNGGQRM 195 (288)
Q Consensus 142 v~~~I~~ri~~~~~lp~~--------~~E~lq--v~rY~------~----------G~~y~~H~D~~~~~~~~~~~~~R~ 195 (288)
+...|.+-|+..+|++.. ....++ +.+|. + .....+|+|+. .
T Consensus 152 l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g------------~ 219 (331)
T 1odm_A 152 LSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS------------L 219 (331)
T ss_dssp HHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS------------S
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCC------------e
Confidence 344444555555677632 123578 99998 4 12356787753 5
Q ss_pred EEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCcc
Q 023053 196 ATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVIR 271 (288)
Q Consensus 196 ~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~~ 271 (288)
+|+|+. |. .||==+.... . .+.|+|..|..||--- ...+| .-..+.|++... .
T Consensus 220 lTlL~q--d~-v~GLQV~~~~-----------------g-Wi~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~~-~ 276 (331)
T 1odm_A 220 ITVLYQ--SN-VQNLQVETAA-----------------G-YQDIEADDTGYLINCGSYMAHLTNN-YYKAPIHRVKWV-N 276 (331)
T ss_dssp EEEEEE--CS-SCCEEEEETT-----------------E-EEECCCCTTSEEEEECHHHHHHTTT-SSCCCCEEEECC-C
T ss_pred EEEEee--CC-CCCEEEEcCC-----------------C-eEECCCCCCeEEEEccHHHHHHhCC-EeeCCCceeCCC-C
Confidence 788865 32 3554344221 1 4789999999888621 11222 235789999532 5
Q ss_pred ceEEEEEEeeeec
Q 023053 272 GNKWSATKWMHVH 284 (288)
Q Consensus 272 G~K~i~~~W~~~~ 284 (288)
.+|+++.-+++-+
T Consensus 277 ~~R~Sia~F~~P~ 289 (331)
T 1odm_A 277 AERQSLPFFVNLG 289 (331)
T ss_dssp SCEEEEEEEECCC
T ss_pred CCEEEEEEEEcCC
Confidence 5899988777643
No 24
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=53.69 E-value=22 Score=31.39 Aligned_cols=88 Identities=23% Similarity=0.227 Sum_probs=54.1
Q ss_pred ceEEeecCCCC--------ccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCCCcccccccccccccccCC
Q 023053 163 GIQVLHYEVGQ--------KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGK 234 (288)
Q Consensus 163 ~lqv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~ 234 (288)
.+++.+|.+.. ...+|+|+. .+|+|+ .| ..||==+.... .
T Consensus 151 ~lr~~~YP~~~~~~~~~~~g~~~HtD~g------------~lTlL~--qd-~~~GLqV~~~~-----------------g 198 (280)
T 3on7_A 151 LLRILHYPPMTGDEEMGAIRAAAHEDIN------------LITVLP--TA-NEPGLQVKAKD-----------------G 198 (280)
T ss_dssp EEEEEEECCCCTTCCCCSEEEEEECCCS------------SEEEEE--CC-SCCCEEEECTT-----------------S
T ss_pred eEEEEECCCCCCccccCcccccCCCCCC------------eEEEEE--ec-CCCCeEEEcCC-----------------C
Confidence 58899998532 246788853 578875 34 23554444221 1
Q ss_pred CCeEEecCCCcEEEEec----CCCCCCCCCCCccccCCCc----cceEEEEEEeeee
Q 023053 235 QGLSVKPKRGDALLFWS----MRPDATLDPSSLHGGCPVI----RGNKWSATKWMHV 283 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~W~~~ 283 (288)
..+.|+|..|..||--- ...+| .-..+.|++.... ..+||++.-+++-
T Consensus 199 ~W~~V~p~pg~~vVNiGD~l~~~Tng-~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P 254 (280)
T 3on7_A 199 SWLDVPSDFGNIIINIGDMLQEASDG-YFPSTSHRVINPEGTDKTKSRISLPLFLHP 254 (280)
T ss_dssp CEEECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEEECCTTCCTTSCEEECCEEECC
T ss_pred CEEECcCCCCEEEEEcChHHHHHhCC-cccCCCceEeCCCCCCCCCCeEEEEEEEcC
Confidence 36789999999888621 12223 2367899985542 3479988777654
No 25
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=48.00 E-value=18 Score=32.79 Aligned_cols=44 Identities=14% Similarity=0.206 Sum_probs=35.9
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc---cc-eEEEEEEeeeeccc
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI---RG-NKWSATKWMHVHEY 286 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~---~G-~K~i~~~W~~~~~~ 286 (288)
..+.++=++|+++||-| .+++|+..+-. .| .||..+.|+....+
T Consensus 295 ~~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~d~~ 342 (358)
T 2wbq_A 295 SLYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITRDLH 342 (358)
T ss_dssp HCEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEESCGG
T ss_pred hceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEecCcc
Confidence 35788889999999998 58999988865 24 79999999987654
No 26
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=47.63 E-value=20 Score=27.08 Aligned_cols=26 Identities=31% Similarity=0.693 Sum_probs=22.6
Q ss_pred EecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeeeecc
Q 023053 239 VKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHE 285 (288)
Q Consensus 239 V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~ 285 (288)
.+|++|+.++| .|..|+.+.|-+.+.
T Consensus 62 YrP~r~D~Vv~---------------------~Gk~y~Vtr~~~~ng 87 (102)
T 2pp6_A 62 VIPRRGDRVVL---------------------RGSEFTVTRIRRFNG 87 (102)
T ss_dssp CCCCTTCEEEE---------------------TTEEEEEEEEEEETT
T ss_pred cccCCCCEEEE---------------------cCcEEEEEEEEEECC
Confidence 69999999999 589999999987764
No 27
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=46.87 E-value=18 Score=32.94 Aligned_cols=43 Identities=9% Similarity=0.234 Sum_probs=35.7
Q ss_pred CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc----ceEEEEEEeeeeccc
Q 023053 236 GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR----GNKWSATKWMHVHEY 286 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~----G~K~i~~~W~~~~~~ 286 (288)
.+.++=++|+++||-| .+++|+..+... +.||..+.|+....+
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~d~~ 337 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLTDLR 337 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEESCGG
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEccccc
Confidence 5788889999999998 589999988752 479999999976654
No 28
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=45.20 E-value=24 Score=30.44 Aligned_cols=41 Identities=10% Similarity=-0.119 Sum_probs=34.2
Q ss_pred CCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc--ceEEEEEEeee
Q 023053 234 KQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR--GNKWSATKWMH 282 (288)
Q Consensus 234 ~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~--G~K~i~~~W~~ 282 (288)
+..+.++=++|++++|.| .+++|+..+-.. +.|+..+.|+.
T Consensus 229 ~~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~ 271 (273)
T 1nx8_A 229 RYYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTA 271 (273)
T ss_dssp TTEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEE
T ss_pred ceEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeecc
Confidence 345788899999999998 589999999764 47898888875
No 29
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=43.34 E-value=43 Score=24.53 Aligned_cols=48 Identities=15% Similarity=0.259 Sum_probs=32.2
Q ss_pred EEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 199 liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.-++|..+|+...|.... ..+.|.-..|....|.| ...|.|+|+..|
T Consensus 5 v~~~~~l~~g~~~~~~~~g-----------------~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g 52 (106)
T 3dqy_A 5 ILRQGDLPPGEMQRYEGGP-----------------EPVMVCNVDGEFFAVQD---------TCTHGDWALSDG 52 (106)
T ss_dssp EEEGGGSCTTCEEEECCSS-----------------SCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEHHHCCCCCEEEEEECC-----------------EEEEEEEECCEEEEEeC---------cCCCCCCCCcCc
Confidence 4456777777766665321 23444446788888875 788999999865
No 30
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=37.99 E-value=37 Score=29.47 Aligned_cols=41 Identities=5% Similarity=-0.098 Sum_probs=34.2
Q ss_pred CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCc-cceEEEEEEeeeec
Q 023053 236 GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVI-RGNKWSATKWMHVH 284 (288)
Q Consensus 236 ~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~W~~~~ 284 (288)
.+.++=++|++++|.| .+++|+..+-. .+.|+..+.|+...
T Consensus 235 ~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp EEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred EEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 4678889999999998 58999999976 35899999998753
No 31
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=35.68 E-value=27 Score=30.64 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=25.7
Q ss_pred CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeec
Q 023053 173 QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFP 214 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp 214 (288)
+...||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 92 ~~~~wH~D~sy~~------~pp~~~~l~~~~~p~~GG~T~~~ 127 (277)
T 3pvj_A 92 DNAVWHTDVTFLP------TPALGAVLSAKQLPAYGGDTLWA 127 (277)
T ss_dssp GGSSCBCTTTTSS------SCCCEEEEEEEECCSSCCCEEEE
T ss_pred cCCCceeeCCCcC------CCCceEEEEeeccCCCCCCcEee
Confidence 4577999986532 12346777777777899999985
No 32
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=35.41 E-value=31 Score=29.95 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=25.7
Q ss_pred cccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCC
Q 023053 175 YDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAA 216 (288)
Q Consensus 175 y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~ 216 (288)
-.||+|..... ..-.+++|.-+.-..+||+|.|-+.
T Consensus 96 ~~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d~ 131 (283)
T 1otj_A 96 DNWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTSG 131 (283)
T ss_dssp CSCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEEH
T ss_pred CCcEeeccCcc------CCCceEEEEEEecCCCCCcceeeeH
Confidence 36999986531 2345677777777789999999653
No 33
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=34.25 E-value=36 Score=30.25 Aligned_cols=42 Identities=19% Similarity=0.338 Sum_probs=34.9
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc---c-eEEEEEEeeeec
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR---G-NKWSATKWMHVH 284 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~---G-~K~i~~~W~~~~ 284 (288)
..+.++=++|++++|-| .+++|+-.+... | .||..+.|+...
T Consensus 258 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~d 303 (324)
T 1ds1_A 258 VTEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRTD 303 (324)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEECS
T ss_pred ccEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEecC
Confidence 46889999999999998 589999888753 3 799999998754
No 34
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=33.83 E-value=27 Score=32.26 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=36.4
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCcc--c-eEEEEEEeeeeccc
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIR--G-NKWSATKWMHVHEY 286 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~--G-~K~i~~~W~~~~~~ 286 (288)
..+.++=++|++++|-| .+++|+..+-.. | .|+....|+....+
T Consensus 327 ~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~d~~ 373 (388)
T 3o2g_A 327 SKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADWDVV 373 (388)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECHHHH
T ss_pred hEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcchHH
Confidence 45889999999999998 589999988763 4 79999999876554
No 35
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=33.16 E-value=32 Score=30.23 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=0.0
Q ss_pred CCccccCccccccccccCCCCceEEEEEEeecCCCCCceeee
Q 023053 172 GQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVF 213 (288)
Q Consensus 172 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~F 213 (288)
+....||+|.... ...-.+++|.-+.-...||+|.|
T Consensus 102 ~~~~~wHtD~sy~------~~pP~~~~L~c~~~p~~GG~T~~ 137 (301)
T 1oih_A 102 QRANSWHTDVTFV------EAYPKASILRSVVAPASGGDTVW 137 (301)
T ss_dssp -CCCSCBCTTTTS------SSCCSEEEEEEEECCSSCCCEEE
T ss_pred CcCcCCEecccCc------CCCCceEEEEEeecCCCCCcccc
No 36
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=29.97 E-value=81 Score=23.15 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=19.9
Q ss_pred eEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 237 LSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 237 ~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+-++-+.|....|.| ...|.|+|+..|
T Consensus 28 ~v~r~~~g~~~A~~~---------~CpH~g~~L~~g 54 (111)
T 1vm9_A 28 LIVNSEEHGVKAYQA---------MCPHQEILLSEG 54 (111)
T ss_dssp EEEEETTTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEEeCCCeEEEEeC---------cCCCCCcCCCCc
Confidence 345556788888875 788999998766
No 37
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=28.18 E-value=87 Score=22.58 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=18.5
Q ss_pred EEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 238 SVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 238 ~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
-++ ..|....|.| ...|.|+|+..|
T Consensus 30 v~r-~~g~~~A~~~---------~CpH~g~~L~~g 54 (103)
T 2qpz_A 30 LYE-VEGEIYATDN---------LCTHGSARMSDG 54 (103)
T ss_dssp EEE-ETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEE-ECCEEEEECC---------cCCCCCCCCCCC
Confidence 345 6777777765 788999998765
No 38
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=28.11 E-value=42 Score=29.87 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=24.9
Q ss_pred CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeec
Q 023053 173 QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFP 214 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp 214 (288)
....||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 98 ~~~~wH~D~s~~~------~pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAA------NYPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCcc------CCCceeEEEEeecCCCCCCCeeE
Confidence 4567999987532 22346777777777899999985
No 39
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=27.50 E-value=32 Score=30.64 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=27.7
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEE
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATK 279 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 279 (288)
..+.++=++|++++|-| .+++|+..+ ..|.+.++..
T Consensus 292 ~~~~~~w~~GDv~i~DN--------~~~lH~R~~-f~g~rR~l~r 327 (330)
T 2q4a_A 292 ECVAVPWQRGDVLLIDN--------WAVLHSRRP-FDPPRRVLAS 327 (330)
T ss_dssp HCBCCCCCTTCEEEEET--------TTEEEEECC-EESCCEEEEE
T ss_pred hEeecCCCCCCEEEEec--------ccccccCCC-CCCCceEEEe
Confidence 35667788999999998 589999999 4676555443
No 40
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=26.73 E-value=1.2e+02 Score=21.93 Aligned_cols=51 Identities=14% Similarity=0.150 Sum_probs=31.9
Q ss_pred EEEEEeecCCCCCceeeecCCCcccccccccccccccCCC-CeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 196 ATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQ-GLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 196 ~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~-~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+..+.-++|..+|+...|.... .. -+-++- .|....|.| ...|.|+|+..|
T Consensus 4 w~~v~~~~~l~~g~~~~~~~~g----------------~~~v~v~r~-~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 4 KLRLCQVASVKDGEPVAVYQEK----------------MPALAVYNV-DGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEEGGGCBTTBCEEECCTT----------------SSCEEEEEE-TTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHhHcCCCCeEEEEECC----------------eeEEEEEEE-CCEEEEEeC---------cCCCCCCCCCCC
Confidence 3445567777777666665321 11 123343 777777765 788999999765
No 41
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=26.35 E-value=29 Score=30.91 Aligned_cols=40 Identities=18% Similarity=0.064 Sum_probs=27.0
Q ss_pred CCCccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCC
Q 023053 171 VGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAA 216 (288)
Q Consensus 171 ~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~ 216 (288)
......||+|..... ..-..++|.-+.-..+||+|.|-+.
T Consensus 113 ~~~~~~~HtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad~ 152 (330)
T 2q4a_A 113 PDQKIPFHHEMAQVR------EFPSKLFFYCEIEPKCGGETPIVLS 152 (330)
T ss_dssp TTSCEEEECTTTTST------TCCSEEEEEEEECCSEECCCCEEEH
T ss_pred CccccccccccCCCC------CCCceEEEECcCCCCcCCceeeecH
Confidence 345667999976531 1224667777777778999998653
No 42
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=25.86 E-value=1.7e+02 Score=22.06 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=34.4
Q ss_pred eEEEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 194 RMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 194 R~~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+.+.-+.-++|..+|+...+-.... +.-+-++...|..-.+.| ...|++.|+.+|
T Consensus 8 ~~W~~Vc~~~dL~~g~~~~~~~~~G---------------~~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~~ 62 (119)
T 4aiv_A 8 QVWTTACAYDHLIPGRGVGVLLDDG---------------SQVALFRLDDGSVHAVGN---------VDPFSGAAVMSR 62 (119)
T ss_dssp EEEEEEEEGGGSCTTCCEEEECTTS---------------CEEEEEECTTSCEEEEES---------BCTTTCCBCGGG
T ss_pred cceeEeeEHHHcCCCCceEEEEcCC---------------cEEEEEEcCCCeEEEEEC---------CCCCCCCccccC
Confidence 5677788888887775554433211 011234555677666654 788999998765
No 43
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=25.17 E-value=38 Score=29.16 Aligned_cols=38 Identities=18% Similarity=-0.085 Sum_probs=25.5
Q ss_pred CccccCccccccccccCCCCceEEEEEEeecCCC--CCceeeecCC
Q 023053 173 QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE--EGGETVFPAA 216 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~--eGGeT~Fp~~ 216 (288)
+...||+|..... ..-.+++|.-+.-.. +||+|.|-+.
T Consensus 96 ~~~~~HtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLL------SQVDQVFLYAAEIKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTT------CCCCEEEEEEEEEESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCcc------CCCeeEEEEeEeCCCCCCCCcchhhhH
Confidence 4567999976531 123456666676666 8999999653
No 44
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=24.09 E-value=62 Score=24.70 Aligned_cols=73 Identities=21% Similarity=0.190 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCc-CccceeeeCCCCCccccceeeecceeecCC---------ccHHHHHHHHHHHHhhCCCCCCCCceEE
Q 023053 97 ECEYLIDLAKPY-MVKSTVVDSKTGQSKDSRVRTSSGTFLKRG---------QDRIIRGIEKRIADFTFIPMEHGEGIQV 166 (288)
Q Consensus 97 EC~~Li~~a~~~-l~~s~v~~~~~g~~~~~~~R~s~~~~l~~~---------~d~v~~~I~~ri~~~~~lp~~~~E~lqv 166 (288)
..+.|++.++.. ...+++..+-.|-.....+++.....+..+ ..+-++++-.++.++..-..-..|+.++
T Consensus 31 L~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~Vd~~eki~~~l~~l~~~v~~Glvt~e~V~V 110 (114)
T 1o51_A 31 LFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEEERINLFLKEIDNIDFDGLVFTADVNV 110 (114)
T ss_dssp HHHHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEEECHHHHHHHHHHHHTCCCCSEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEEcCHHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 356677777543 556788777666554444444433222211 2355666667777665422223467777
Q ss_pred eec
Q 023053 167 LHY 169 (288)
Q Consensus 167 ~rY 169 (288)
.+|
T Consensus 111 ~r~ 113 (114)
T 1o51_A 111 VKM 113 (114)
T ss_dssp CC-
T ss_pred Eec
Confidence 776
No 45
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=23.87 E-value=77 Score=23.89 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=33.3
Q ss_pred EEEEEeecCCCCCceeeecCCCcccccccccccccccCCCCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc
Q 023053 196 ATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG 272 (288)
Q Consensus 196 ~T~liYLNDv~eGGeT~Fp~~~~~~s~~~~~~~~~~c~~~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G 272 (288)
+..+.-++|..+|+...|.... ..-+-++ ..|....|.| ...|.|+|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g----------------~~v~v~r-~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDG----------------DEVMVVR-DGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETT----------------EEEEEEE-ETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECC----------------EEEEEEE-ECCEEEEEeC---------cCCCCCCCCCCC
Confidence 4556667888777766665321 0122334 4788878875 788999999876
No 46
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=22.97 E-value=89 Score=27.41 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=32.3
Q ss_pred CCeEEecCCCcEEEEecCCCCCCCCCCCccccCCCccc-eEEEEEEeeee
Q 023053 235 QGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRG-NKWSATKWMHV 283 (288)
Q Consensus 235 ~~~~V~Pk~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~W~~~ 283 (288)
..+..+=+.|++++|.| .+++|+..+-..+ .|+.-+.|+..
T Consensus 240 ~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i~g 281 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHIHA 281 (293)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEEcC
Confidence 34677888999999998 5899999876543 57888888764
No 47
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=22.04 E-value=32 Score=32.94 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=49.7
Q ss_pred CCceEEEEEEeecCC--CCCceeeecCCCc--------cc-cc---------c--------cccccccccCCCCeEEec-
Q 023053 191 GGQRMATLLMYLSDV--EEGGETVFPAANA--------NF-TS---------V--------RWWNELSECGKQGLSVKP- 241 (288)
Q Consensus 191 ~~~R~~T~liYLNDv--~eGGeT~Fp~~~~--------~~-s~---------~--------~~~~~~~~c~~~~~~V~P- 241 (288)
...|.+==.+=|++. .+||-.+.| ... .+ .. . +.|..+.+ ..+...|
T Consensus 295 s~FR~fQGwlaLS~~gP~eGtL~v~P-~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~---~~mv~iP~ 370 (461)
T 2dbn_A 295 SVFRTFQGWTALSDMLPGQGLLHVVP-IPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLI---EALTSIPK 370 (461)
T ss_dssp CSCCSEEEEEESSCBCTTSSCEEECS-CTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH---TTCEECCC
T ss_pred cccceeeeehhccCCCCCCCcEEEee-chhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCccc---CceeeCCC
Confidence 345666677778875 478888888 421 00 00 1 11211111 2334555
Q ss_pred -CCCcEEEEecCCCCCCCCCCCccccCCCccceEEEEEEeee
Q 023053 242 -KRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMH 282 (288)
Q Consensus 242 -k~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 282 (288)
+.|+.|+|. ..+.|++.|+..|+.+....++-
T Consensus 371 vePGD~V~WH---------~D~iH~V~~~h~g~~~s~V~YIp 403 (461)
T 2dbn_A 371 LEAGDSVWWH---------CDVIHSVAPVENQQGWGNVMYIP 403 (461)
T ss_dssp BCTTCEEEEE---------TTCCEEECCBSSCCSCCCEEECC
T ss_pred CCCCCEEEEc---------CCCccccccCCCCCcceeEEEec
Confidence 789999996 58999999999998877666553
No 48
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=21.38 E-value=62 Score=29.13 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=24.2
Q ss_pred CccccCccccccccccCCCCceEEEEEEeecCCCCCceeeecCC
Q 023053 173 QKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAA 216 (288)
Q Consensus 173 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~eGGeT~Fp~~ 216 (288)
+...||+|..... ..-.+++|.-+.... ||+|.|-+.
T Consensus 163 ~~l~~HtD~sy~~------~pp~~~~L~cl~~p~-gG~T~~ad~ 199 (358)
T 2wbq_A 163 QELGWHTEDAFSP------YRADYVGLLSLRNPD-GVATTLAGV 199 (358)
T ss_dssp SCEEEECTTTTCT------TCCSEEEEEEEECTT-CCEEEEEEC
T ss_pred CCccccccCCCCC------CCCCeEEEEeEecCC-CCCceEEec
Confidence 3456899976431 123456777777666 899999654
No 49
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.27 E-value=65 Score=28.32 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=24.0
Q ss_pred ccccCccccccccccCCCCceEEEEEEeecCCC--CCceeeecCC
Q 023053 174 KYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVE--EGGETVFPAA 216 (288)
Q Consensus 174 ~y~~H~D~~~~~~~~~~~~~R~~T~liYLNDv~--eGGeT~Fp~~ 216 (288)
...||+|..... ..-.+++|..+.-.. .||+|.|-+.
T Consensus 108 ~~~wHtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d~ 146 (293)
T 3eat_X 108 YVPLHWDGMYLE------TVPEFQVFHCVDAPGDSDGGRTTFSST 146 (293)
T ss_dssp CEEEECTTTTSS------EEEEEEEEEEEECCSCCSBCCEEEEEH
T ss_pred CccceECCCCcC------CCCceEEEEeEeCCCCCCCCceEEeeH
Confidence 346899986531 223566666666554 7999999643
Done!