BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023055
         (288 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q55GB1|ABCGF_DICDI ABC transporter G family member 15 OS=Dictyostelium discoideum
           GN=abcG15 PE=3 SV=1
          Length = 1475

 Score = 33.1 bits (74), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)

Query: 52  STSFDIAGKEENINQISESPFSNGSSPRI---YVSTNPRGAELLPPGIVVSESDFFLRRL 108
           +T  D+  K +   Q+  +   NG    I    ++      ++L P + V E+  F  +L
Sbjct: 886 TTLLDVLAKRKTTGQVQGTTLLNGKPLEIDFERITGYVEQMDVLNPALTVRETLRFSAKL 945

Query: 109 WGEPSEDLKKKPKYLLTITVGLNQKKNIDRMV 140
            GEP+  L++K KY+  +   +  K   D ++
Sbjct: 946 RGEPTISLEEKFKYVEQVLEMMEMKHLGDALI 977


>sp|Q39ZX2|MIAA2_PELCD tRNA dimethylallyltransferase 2 OS=Pelobacter carbinolicus (strain
           DSM 2380 / Gra Bd 1) GN=miaA2 PE=3 SV=1
          Length = 326

 Score = 32.3 bits (72), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 13/45 (28%), Positives = 27/45 (60%)

Query: 138 RMVKKFSEDFQIMLFHYDGQTSQWDEFEWSKSAIHVSIRRQTKWW 182
           RM++ +  +++++  H  G+ ++ D F+   SAIH   +RQ  W+
Sbjct: 253 RMLEHYGLEYRLVSQHLRGELNRNDMFQKLNSAIHQFAKRQDTWF 297


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.137    0.427 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,504,505
Number of Sequences: 539616
Number of extensions: 5026219
Number of successful extensions: 11697
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11696
Number of HSP's gapped (non-prelim): 3
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)