Query 023057
Match_columns 288
No_of_seqs 135 out of 1394
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:38:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfd_A Acyl-COA dehydrogenase; 100.0 3.3E-50 1.1E-54 367.4 22.2 263 22-288 10-272 (393)
2 2vig_A Short-chain specific ac 100.0 3.2E-49 1.1E-53 360.7 26.7 260 26-288 1-260 (391)
3 2d29_A Acyl-COA dehydrogenase; 100.0 4.2E-49 1.4E-53 359.4 27.4 259 27-288 3-265 (387)
4 3p4t_A Putative acyl-COA dehyd 100.0 2.8E-49 9.7E-54 362.3 25.9 262 23-288 18-280 (403)
5 1ukw_A Acyl-COA dehydrogenase; 100.0 4E-49 1.4E-53 358.6 25.4 258 27-288 1-258 (379)
6 1buc_A Butyryl-COA dehydrogena 100.0 6.4E-49 2.2E-53 357.7 26.1 259 27-288 1-263 (383)
7 2jif_A Short/branched chain sp 100.0 6.4E-49 2.2E-53 360.0 25.9 260 25-288 23-282 (404)
8 3nf4_A Acyl-COA dehydrogenase; 100.0 1.7E-48 5.8E-53 355.4 27.5 257 26-288 11-267 (387)
9 3r7k_A Probable acyl COA dehyd 100.0 8.7E-49 3E-53 359.1 25.2 260 25-288 23-283 (403)
10 2pg0_A Acyl-COA dehydrogenase; 100.0 2.1E-48 7.2E-53 354.5 26.6 258 26-288 5-265 (385)
11 3ii9_A Glutaryl-COA dehydrogen 100.0 4E-49 1.4E-53 360.6 19.9 264 20-288 8-271 (396)
12 1egd_A Medium chain acyl-COA d 100.0 2.5E-48 8.6E-53 355.2 24.6 259 26-288 11-272 (396)
13 1rx0_A Acyl-COA dehydrogenase 100.0 1.1E-47 3.9E-52 350.6 26.6 257 27-288 15-271 (393)
14 1ivh_A Isovaleryl-COA dehydrog 100.0 6.2E-48 2.1E-52 352.4 24.9 259 29-288 11-271 (394)
15 3sf6_A Glutaryl-COA dehydrogen 100.0 7E-48 2.4E-52 353.1 25.2 255 24-288 23-278 (403)
16 2dvl_A Acyl-COA dehydrogenase; 100.0 8.2E-48 2.8E-52 349.1 25.3 251 30-288 2-252 (372)
17 3mpi_A Glutaryl-COA dehydrogen 100.0 2.8E-48 9.7E-53 355.0 21.2 257 27-288 1-262 (397)
18 2eba_A Putative glutaryl-COA d 100.0 1.3E-47 4.5E-52 349.3 24.2 256 25-288 5-261 (385)
19 3swo_A Glutaryl-COA dehydrogen 100.0 1.7E-47 5.9E-52 350.0 23.3 256 23-288 18-273 (399)
20 2ix5_A Acyl-coenzyme A oxidase 100.0 9.7E-47 3.3E-51 348.4 25.9 254 27-288 51-304 (436)
21 4hr3_A Putative acyl-COA dehyd 100.0 4.1E-47 1.4E-51 349.2 20.8 262 24-288 2-288 (415)
22 1siq_A GCD, glutaryl-COA dehyd 100.0 4.9E-46 1.7E-50 339.7 23.9 259 21-288 4-264 (392)
23 3owa_A Acyl-COA dehydrogenase; 100.0 4.5E-46 1.5E-50 355.0 24.2 254 27-288 29-285 (597)
24 1r2j_A Protein FKBI; polyketid 100.0 3.2E-46 1.1E-50 337.9 20.6 240 41-288 2-242 (366)
25 2uxw_A VERY-long-chain specifi 100.0 1.7E-45 5.8E-50 351.9 24.1 279 6-288 21-309 (607)
26 2c12_A Nitroalkane oxidase; ox 100.0 1.8E-45 6E-50 340.7 21.1 259 26-288 1-293 (439)
27 2z1q_A Acyl-COA dehydrogenase; 100.0 4.8E-45 1.7E-49 347.6 24.0 266 13-288 12-280 (577)
28 3mkh_A Nitroalkane oxidase; ox 100.0 2.6E-45 9E-50 339.4 18.7 258 26-288 2-290 (438)
29 3m9v_A FAD-dependent oxidoredu 100.0 1E-43 3.5E-48 328.9 19.2 257 23-288 12-276 (439)
30 2wbi_A Acyl-COA dehydrogenase 100.0 1.1E-43 3.7E-48 327.6 17.9 257 26-288 18-296 (428)
31 3mxl_A Nitrososynthase; flavin 100.0 4.7E-44 1.6E-48 326.8 14.2 254 26-288 4-265 (395)
32 2or0_A Hydroxylase; APC7385, r 100.0 4.4E-41 1.5E-45 309.0 13.0 243 26-288 13-271 (414)
33 2jbr_A P-hydroxyphenylacetate 100.0 3.6E-40 1.2E-44 303.6 13.6 251 16-288 20-283 (422)
34 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2.1E-39 7.3E-44 295.9 14.7 232 38-288 11-254 (394)
35 1w07_A Acyl-COA oxidase; oxido 100.0 2.3E-34 8E-39 277.5 13.0 246 30-288 25-301 (659)
36 3djl_A Protein AIDB; alpha hel 100.0 4.1E-32 1.4E-36 255.9 18.0 207 67-288 88-315 (541)
37 2ddh_A Acyl-COA oxidase; beta 100.0 7.5E-30 2.6E-34 245.9 16.0 241 32-288 26-298 (661)
38 1u8v_A Gamma-aminobutyrate met 99.9 1.2E-25 4.1E-30 209.5 16.7 162 125-287 118-315 (490)
39 2yyk_A 4-hydroxyphenylacetate- 99.9 3.6E-24 1.2E-28 199.3 16.9 153 132-286 122-299 (481)
40 3hwc_A Chlorophenol-4-monooxyg 99.9 2.3E-22 7.9E-27 187.3 13.6 155 130-287 127-311 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.7 1.7E-16 5.7E-21 148.1 14.2 152 133-284 133-302 (517)
42 3zzp_A TS9, ribosomal protein 20.2 71 0.0024 21.0 2.6 34 16-49 41-74 (77)
No 1
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=3.3e-50 Score=367.39 Aligned_cols=263 Identities=33% Similarity=0.559 Sum_probs=236.9
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHH
Q 023057 22 SAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIA 101 (288)
Q Consensus 22 ~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v 101 (288)
+.+.+|++.+++++. ++++.+++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+++.+
T Consensus 10 ~~p~~m~~~~~~e~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v 86 (393)
T 3pfd_A 10 GNPSFELFQLPEEHI-ALREAIRALAEKEIAPYAAEVDEKARFPE--EALAALNSSGFSAIHVPEEYGGQGADSVATCIV 86 (393)
T ss_dssp ------------CHH-HHHHHHHHHHHHHTGGGHHHHHHTTCCCH--HHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHH
T ss_pred CCCcccCCCCCHHHH-HHHHHHHHHHHHhCchHHHHHhhhCCCCH--HHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHH
Confidence 456678899999999 99999999999999999888999999999 999999999999999999999999999999999
Q ss_pred HHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEee
Q 023057 102 MEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIING 181 (288)
Q Consensus 102 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G 181 (288)
+|+++++++++++.+..|. .+...+..+|+++|+++|||++.+|+.++|+++|||++|||...+.|+|++++|||+|||
T Consensus 87 ~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG 165 (393)
T 3pfd_A 87 IEEVARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNG 165 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEE
T ss_pred HHHHHhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEee
Confidence 9999999999998776665 566678889999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccH
Q 023057 182 NKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGV 261 (288)
Q Consensus 182 ~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~ 261 (288)
+|.|+||+..||+++|.++++++++..++++|+||++.|||++.++|+++|++++++++|.|+||+||+++++|.++.++
T Consensus 166 ~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~ 245 (393)
T 3pfd_A 166 SKCWITNGGKSTWYTVMAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGF 245 (393)
T ss_dssp EEEEEETTTTCSEEEEEEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred EEEEecCCcccCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchH
Confidence 99999999999999999998755445678999999999999998999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 262 YVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 262 ~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
......++..|+.+++.++|+++++++
T Consensus 246 ~~~~~~l~~~r~~~aa~~~G~a~~al~ 272 (393)
T 3pfd_A 246 KTALATLDHTRPTIGAQAVGIAQGALD 272 (393)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998999999999999999999999874
No 2
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=3.2e-49 Score=360.65 Aligned_cols=260 Identities=36% Similarity=0.624 Sum_probs=238.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
||++.+++++. ++++++++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|++
T Consensus 1 m~~~~~~~~~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 77 (391)
T 2vig_A 1 MQSVELPETHQ-MLLQTCRDFAEKELFPIAAQVDKEHLFPA--AQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEI 77 (391)
T ss_dssp -----CCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCCH--HHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHH-HHHHHHHHHHHHhCcccHHHHHhcCCCCH--HHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHH
Confidence 57788999999 99999999999999888888888899999 9999999999999999999999999999999999999
Q ss_pred HhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeee
Q 023057 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMW 185 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~ 185 (288)
+++++++++.+..|...+...|..+|+++|+++||+++++|+.++|+++|||++|||...+.|+|++++|||+|||+|.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~ 157 (391)
T 2vig_A 78 SRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAW 157 (391)
T ss_dssp HHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEe
Confidence 99999988877777435677888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHH
Q 023057 186 CTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMM 265 (288)
Q Consensus 186 v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~ 265 (288)
+||+..||+++|.++++++++++++++|+||++.|||++.+.|+++|++++++++|.|+||+||+++++|.++.++....
T Consensus 158 ~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~ 237 (391)
T 2vig_A 158 ITNAWEASAAVVFASTDRALQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAM 237 (391)
T ss_dssp EETTTTCSEEEEEEECCSSSTTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHH
T ss_pred ecCCCcCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHH
Confidence 99999999999999986543455789999999999999988999999999999999999999999999999999998888
Q ss_pred HhhhHHHHHHHHHHHHHhhcccC
Q 023057 266 SGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 266 ~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
..++..|+..++.++|+++++++
T Consensus 238 ~~l~~~r~~~aa~~~G~a~~al~ 260 (391)
T 2vig_A 238 QTLDMGRIGIASQALGIAQTALD 260 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999874
No 3
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=4.2e-49 Score=359.40 Aligned_cols=259 Identities=36% Similarity=0.598 Sum_probs=241.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEIS 106 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~ 106 (288)
|++.+++++. ++++.+++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+++
T Consensus 3 m~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~ 79 (387)
T 2d29_A 3 LWFEEGAEER-QVLGPFREFLKAEVAPGAAERDRTGAFPW--DLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIA 79 (387)
T ss_dssp CTTSCCHHHH-HHHHHHHHHHHHHTGGGHHHHHHHCCCCH--HHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHH-HHHHHHHHHHHHhcchhHHHHhhcCCCCH--HHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHH
Confidence 6788999999 99999999999999888888888899999 99999999999999999999999999999999999999
Q ss_pred hhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeee
Q 023057 107 RASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWC 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v 186 (288)
++++++++.+..|..++...|..+|+++|+++|||++++|+.++|+++|||++|||...+.|+|++++|||+|||+|.|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~ 159 (387)
T 2d29_A 80 YYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFI 159 (387)
T ss_dssp HHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred hhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEecc
Confidence 99999988777774356778889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEEEeCCCC----CCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHH
Q 023057 187 TNGPVAQTLVVYAKTDIKA----GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY 262 (288)
Q Consensus 187 ~~~~~ad~~lv~a~~~~~~----~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~ 262 (288)
||+..||+++|.++++++. +++++++|+||++.||+++.++|+++|++++++++|+|+||+||++++++.++.++.
T Consensus 160 s~~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~ 239 (387)
T 2d29_A 160 TQGSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFY 239 (387)
T ss_dssp ETTTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHH
T ss_pred CCCCcCCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHH
Confidence 9999999999999986432 445789999999999999988999999999999999999999999999999989998
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 263 VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 263 ~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.....++.+|+.+++.++|+++++++
T Consensus 240 ~~~~~l~~~r~~~aa~~~G~a~~al~ 265 (387)
T 2d29_A 240 DVLRVLDGGRIGIAAMAVGLGQAALD 265 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999874
No 4
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=2.8e-49 Score=362.29 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=243.0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHH
Q 023057 23 AAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAM 102 (288)
Q Consensus 23 ~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~ 102 (288)
.+..|++.+++++. ++++.+++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++
T Consensus 18 ~~~~M~~~~~~e~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ 94 (403)
T 3p4t_A 18 GPGSMSIWTTAERE-ALRKTVRAFAEREVLPHAHEWERAGEIPR--ELHRKAAELGLLGAGFPEDAGGSGGDGADPVVIC 94 (403)
T ss_dssp -----CTTSSHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTSCCH--HHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHH
T ss_pred CCCCCCCCCCHHHH-HHHHHHHHHHHHhCchhHHHHhhcCCCCH--HHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHH
Confidence 55668889999999 99999999999999999888899999999 9999999999999999999999999999999999
Q ss_pred HHHHhhCCch-hhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEee
Q 023057 103 EEISRASGSV-GLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIING 181 (288)
Q Consensus 103 e~l~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G 181 (288)
|+++++++++ ++.+..|..++...+..+|+++|+++||+++++|+.++|+++|||++|||...+.|++++++|||+|||
T Consensus 95 eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG 174 (403)
T 3p4t_A 95 EEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVING 174 (403)
T ss_dssp HHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEE
T ss_pred HHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEE
Confidence 9999999998 777777765677788999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccH
Q 023057 182 NKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGV 261 (288)
Q Consensus 182 ~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~ 261 (288)
+|.|+||+..||+++|.++++++ +.+++++|+||.+.|||++.++|+++|++++++++|+|+||+||+++++|..+.++
T Consensus 175 ~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~ 253 (403)
T 3p4t_A 175 AKTYITSGVRADYVVTAARTGGP-GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGF 253 (403)
T ss_dssp EEEEEETTTTCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred EEEEecCCcccCEEEEEEEeCCC-CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchH
Confidence 99999999999999999998754 44678999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 262 YVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 262 ~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
......++.+|+.+++.++|+++++++
T Consensus 254 ~~~~~~l~~~r~~~aa~~~G~a~~al~ 280 (403)
T 3p4t_A 254 AQIAAAFVAERVGLATQAYAGAQRCLD 280 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999874
No 5
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4e-49 Score=358.57 Aligned_cols=258 Identities=34% Similarity=0.552 Sum_probs=240.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEIS 106 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~ 106 (288)
|++.+++++. ++++.+++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+++
T Consensus 1 M~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~ 77 (379)
T 1ukw_A 1 IDFSLTEEQR-QLQALARRFAKEVILPVAQEYDEKEEVPW--PVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELA 77 (379)
T ss_dssp CBCCCCHHHH-HHHHHHHHHHHHTTGGGHHHHHHHTCCCH--HHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHH-HHHHHHHHHHHHhCchhHHHHhhcCCCCH--HHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHH
Confidence 5677899999 99999999999999888888888899999 99999999999999999999999999999999999999
Q ss_pred hhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeee
Q 023057 107 RASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWC 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v 186 (288)
++++++++.+..|. .+...|..+|+++|+++|||++++|+.++|+++|||++|||...+.++|++++|||+|||+|.|+
T Consensus 78 ~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~ 156 (379)
T 1ukw_A 78 YACMGIYTIPMASD-LGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWI 156 (379)
T ss_dssp HHCHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred HhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecc
Confidence 99999988777774 67788889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHHH
Q 023057 187 TNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMS 266 (288)
Q Consensus 187 ~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~ 266 (288)
||+..||+++|.++++++++++++++|+||.+.||+++.+.|+++|++++++++|.|+||+||+++++|..+.++.....
T Consensus 157 s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~ 236 (379)
T 1ukw_A 157 SNGGEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQ 236 (379)
T ss_dssp ETTTTEEEEEEEEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHH
T ss_pred cCCCcCCEEEEEEEcCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHH
Confidence 99999999999999864434457899999999999999888999999999999999999999999999998889988888
Q ss_pred hhhHHHHHHHHHHHHHhhcccC
Q 023057 267 GLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 267 ~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.++..|+.+++.++|+++++++
T Consensus 237 ~l~~~r~~~aa~~~G~a~~al~ 258 (379)
T 1ukw_A 237 TLNKTRIPVAAGSVGVARRALD 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999874
No 6
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.4e-49 Score=357.72 Aligned_cols=259 Identities=37% Similarity=0.621 Sum_probs=242.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCC---CCHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLG---LGYLYHCIAME 103 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g---~~~~~~~~v~e 103 (288)
|++.+++++. ++++.+++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.| +++.+.+.++|
T Consensus 1 M~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~e 77 (383)
T 1buc_A 1 MDFNLTDIQQ-DFLKLAHDFGEKKLAPTVTERDHKGIYDK--ELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVE 77 (383)
T ss_dssp CBCCCCHHHH-HHHHHHHHHHHHTTTTTHHHHHHHTCCCH--HHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHH
T ss_pred CCCCCCHHHH-HHHHHHHHHHHHhCchhHHHHhhcCCCCH--HHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHH
Confidence 5677999999 99999999999999988888888899999 999999999999999999999999 99999999999
Q ss_pred HHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEe-CCeEEEeeE
Q 023057 104 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGN 182 (288)
Q Consensus 104 ~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~-~~g~~l~G~ 182 (288)
+++++++++++.+..|..++...+..+|+++|+++|||++++|+.++|+++|||++|||...+.++|+++ +|||+|||+
T Consensus 78 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~ 157 (383)
T 1buc_A 78 ELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGS 157 (383)
T ss_dssp HHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEE
T ss_pred HHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEE
Confidence 9999999999877777546678888999999999999999999999999999999999999999999999 999999999
Q ss_pred eeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHH
Q 023057 183 KMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY 262 (288)
Q Consensus 183 k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~ 262 (288)
|.|+||+..||+++|.++++++++++++++|+||++.|||++.+.|+++|++++++++|+|+||+||++++++.++.++.
T Consensus 158 K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~ 237 (383)
T 1buc_A 158 KIFITNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFK 237 (383)
T ss_dssp EEEEETTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHH
T ss_pred EeccCCCCcCCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHH
Confidence 99999999999999999987544556789999999999999988899999999999999999999999999999889998
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 263 VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 263 ~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.....++..|+..++.++|+++++++
T Consensus 238 ~~~~~l~~~r~~~aa~~~G~a~~al~ 263 (383)
T 1buc_A 238 IAMMTLDGGRIGVAAQALGIAEAALA 263 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999874
No 7
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=6.4e-49 Score=359.97 Aligned_cols=260 Identities=34% Similarity=0.587 Sum_probs=240.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHH
Q 023057 25 FSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEE 104 (288)
Q Consensus 25 ~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~ 104 (288)
..|.+.+++++. ++++++++|+++++.|...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+
T Consensus 23 ~~~~~~~~~e~~-~l~~~~r~~~~~~~~p~~~~~d~~~~~~~--~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 99 (404)
T 2jif_A 23 MAPLQTFTDEEM-MIKSSVKKFAQEQIAPLVSTMDENSKMEK--SVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEE 99 (404)
T ss_dssp -CCTTCCCHHHH-HHHHHHHHHHHHHTGGGHHHHHHHTCCCH--HHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHH
T ss_pred ccccCCCCHHHH-HHHHHHHHHHHHhCcccHHHHhhcCCCCH--HHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHH
Confidence 356678999999 99999999999999988778888899999 999999999999999999999999999999999999
Q ss_pred HHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEee
Q 023057 105 ISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKM 184 (288)
Q Consensus 105 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~ 184 (288)
++++++++++.+..|..++..+|..+|+++|+++|||++.+|. ++|+++|||+.|||...+.|+|++++|||+|||+|.
T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~ 178 (404)
T 2jif_A 100 LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKM 178 (404)
T ss_dssp HHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEE
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEE
Confidence 9999999998877776566778889999999999999999986 789999999999999999999999999999999999
Q ss_pred eeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHH
Q 023057 185 WCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVM 264 (288)
Q Consensus 185 ~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~ 264 (288)
|+||+..||+++|+++++++++.+++++|+||++.|||++.+.|+++|++++++++|.|+||+||+++++|..+.++...
T Consensus 179 ~is~a~~Ad~~~v~ar~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~ 258 (404)
T 2jif_A 179 WISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYA 258 (404)
T ss_dssp EEETTTTCSEEEEEEESCGGGGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHH
T ss_pred eecCCcccCEEEEEEEeCCCCCCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHH
Confidence 99999999999999998644344578999999999999999999999999999999999999999999999998999888
Q ss_pred HHhhhHHHHHHHHHHHHHhhcccC
Q 023057 265 MSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 265 ~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
...++.+|+.+++.++|+++++++
T Consensus 259 ~~~l~~~r~~~aa~~~G~a~~al~ 282 (404)
T 2jif_A 259 IGSLNEGRIGIAAQMLGLAQGCFD 282 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999874
No 8
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.7e-48 Score=355.37 Aligned_cols=257 Identities=31% Similarity=0.592 Sum_probs=241.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
++++.+++++. ++++.+++|+++.+.+...+.|+.+.+|+ ++|++|++.||+++.+|++|||.|+++.+.+.++|++
T Consensus 11 ~~~~~~~~~~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel 87 (387)
T 3nf4_A 11 VDRLLPSQEAA-ELIELTREIADKVLDPIVDRHEKDETYPE--GVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEI 87 (387)
T ss_dssp CCCCCSSHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCCT--THHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred cccccCCHHHH-HHHHHHHHHHHHhCCccHHHHhhhCCCCH--HHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHH
Confidence 34577899999 99999999999999999888999999999 9999999999999999999999999999999999999
Q ss_pred HhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeee
Q 023057 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMW 185 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~ 185 (288)
+++++++++.+..|. ++...+..+|+++|+++|||++++|+.++|+++|||++|||...+.++|++++|||+|||+|.|
T Consensus 88 ~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~ 166 (387)
T 3nf4_A 88 AARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSW 166 (387)
T ss_dssp HTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEE
T ss_pred HHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEec
Confidence 999999998888876 6777888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHH
Q 023057 186 CTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMM 265 (288)
Q Consensus 186 v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~ 265 (288)
+||+..||+++|.++++ ++.+++++|+||.+.|||++.+.|+++|++++++++|.|+||+||+++++|..+.++....
T Consensus 167 ~s~~~~Ad~~~v~a~~~--~~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~ 244 (387)
T 3nf4_A 167 ITHGGKADFYTLFARTG--EGSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAF 244 (387)
T ss_dssp EETTTTCSEEEEEEECC----CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHH
T ss_pred ccCCcccCEEEEEEEeC--CCCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHH
Confidence 99999999999999986 2445789999999999999988999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHhhcccC
Q 023057 266 SGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 266 ~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
..++.+|+.+++.++|+++++++
T Consensus 245 ~~l~~~r~~~aa~~~G~a~~al~ 267 (387)
T 3nf4_A 245 SALDSGRLGIAAVATGLAQAALD 267 (387)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999874
No 9
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=8.7e-49 Score=359.07 Aligned_cols=260 Identities=27% Similarity=0.466 Sum_probs=241.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHH
Q 023057 25 FSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEE 104 (288)
Q Consensus 25 ~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~ 104 (288)
..+++.++++|. ++++.+++|+++++.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+
T Consensus 23 ~~~~~~~~~e~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 99 (403)
T 3r7k_A 23 VAPEAWTTPERR-ALSQMARSFVEREIAPKLAEWEHVGEIPR--DLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEA 99 (403)
T ss_dssp --CGGGGCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTSCCT--HHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHH
T ss_pred cCCCCCCCHHHH-HHHHHHHHHHHHhCChhHHHHHhcCCCCH--HHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHH
Confidence 344556899999 99999999999999999888899999999 999999999999999999999999999999999999
Q ss_pred HHhh-CCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEe
Q 023057 105 ISRA-SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNK 183 (288)
Q Consensus 105 l~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k 183 (288)
++++ ++++++++..+..++...|..+|+++|+++||+++++|+.++|+++|||++|||...+.|+|++++|||+|||+|
T Consensus 100 la~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K 179 (403)
T 3r7k_A 100 ILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAK 179 (403)
T ss_dssp HHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEE
T ss_pred HHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEE
Confidence 9998 888877776554467788999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHH
Q 023057 184 MWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYV 263 (288)
Q Consensus 184 ~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~ 263 (288)
.|+||+..||+++|.++++++ +++++++|+||.+.|||++.++|+++|++++++++|+|+||+||++++++..+.++..
T Consensus 180 ~~vs~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~ 258 (403)
T 3r7k_A 180 TFITSGVRADFVTTAVRTGGP-GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQ 258 (403)
T ss_dssp EEEETTTTCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHH
T ss_pred EcccCCccCCEEEEEEEcCCC-CCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHH
Confidence 999999999999999998754 4557899999999999999889999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 264 MMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 264 ~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
....++.+|+.+++.++|+++++++
T Consensus 259 ~~~~l~~~r~~~aa~~~G~a~~al~ 283 (403)
T 3r7k_A 259 IMQQFQAERLGIAVQAYATAGRALD 283 (403)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999874
No 10
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.1e-48 Score=354.53 Aligned_cols=258 Identities=32% Similarity=0.590 Sum_probs=238.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
|.++.+++++. ++++++++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|++
T Consensus 5 m~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 81 (385)
T 2pg0_A 5 MTARYLREEHH-MFRAAFRKFLEKEAYPHYNDWEKRGIIPR--SFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEEL 81 (385)
T ss_dssp -CCTTCCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTSCCH--HHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred cCCCCCCHHHH-HHHHHHHHHHHHhCchhHHHHHhcCCCCH--HHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH
Confidence 44478999999 99999999999999988888888899999 9999999999999999999999999999999999999
Q ss_pred HhhC-CchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEee
Q 023057 106 SRAS-GSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKM 184 (288)
Q Consensus 106 ~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~ 184 (288)
++++ +++++.+ |...+...+..+|+++|+++|||++++|+.++|+++|||++|||...+.|+|++++|||+|||+|.
T Consensus 82 a~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~ 159 (385)
T 2pg0_A 82 EKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKT 159 (385)
T ss_dssp HHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEE
T ss_pred HhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEe
Confidence 9999 8887755 544567788899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCCEEEEEEEeCCC--CCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHH
Q 023057 185 WCTNGPVAQTLVVYAKTDIK--AGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY 262 (288)
Q Consensus 185 ~v~~~~~ad~~lv~a~~~~~--~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~ 262 (288)
|+||+..||+++|.++++++ ++++++++|+||++.||+++.++|+++|++++++++|+|+||+||++++++.++.++.
T Consensus 160 ~~s~~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~ 239 (385)
T 2pg0_A 160 FITNGIHADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFY 239 (385)
T ss_dssp EETTTTTCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHH
T ss_pred cccCCcccCEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHH
Confidence 99999999999999998643 2344789999999999999988899999999999999999999999999999999998
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 263 VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 263 ~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.....++..|+..++.++|+++++++
T Consensus 240 ~~~~~l~~~r~~~aa~~~G~a~~al~ 265 (385)
T 2pg0_A 240 YLMEKLQQERLVVAIAAQTAAEVMFS 265 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999874
No 11
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=4e-49 Score=360.56 Aligned_cols=264 Identities=35% Similarity=0.587 Sum_probs=238.6
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHH
Q 023057 20 KHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHC 99 (288)
Q Consensus 20 ~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~ 99 (288)
.+..+.+|++.++++|. ++++++++|+++++.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+
T Consensus 8 ~~~~~~~m~~~~~~e~~-~l~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~ 84 (396)
T 3ii9_A 8 HWDDPLLLDQQLADDER-MVRDAAHAYAQGKLAPRVTEAFRHETTDA--AIFREMGEIGLLGPTIPEQYGGPGLDYVSYG 84 (396)
T ss_dssp CTTSTTCGGGGSCHHHH-HHHHHHHHHCCCCCHHHHHHHHHHTCCCT--HHHHHHHHTTCSSTTSCGGGTSCCCCHHHHH
T ss_pred CCCcccccCCCCCHHHH-HHHHHHHHHHHHhCChhHHHHHhhCCCCH--HHHHHHHhCCCCCCCCChhhCCCCCCHHHHH
Confidence 45667788899999999 99999999999999888888899999999 9999999999999999999999999999999
Q ss_pred HHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEE
Q 023057 100 IAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYII 179 (288)
Q Consensus 100 ~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l 179 (288)
.++|+++++++++++.+..|...+...|..+|+++|+++|||++++|+.++|+++|||++|||...+.|+|++++|||+|
T Consensus 85 ~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~l 164 (396)
T 3ii9_A 85 LIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSL 164 (396)
T ss_dssp HHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEE
T ss_pred HHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEE
Confidence 99999999999988877777545567788999999999999999999999999999999999999999999999999999
Q ss_pred eeEeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCc
Q 023057 180 NGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGK 259 (288)
Q Consensus 180 ~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~ 259 (288)
||+|.|+||+..||+++|.+++++ ++.+++++|+||++.|||++.+.|+++|++++++++|+|+||+||++++++. +.
T Consensus 165 nG~K~~vs~a~~Ad~~~v~a~~~~-~g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~ 242 (396)
T 3ii9_A 165 SGSKMWITNSPIADVFVVWAKLDE-DGRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VK 242 (396)
T ss_dssp EEEEEEEETGGGCSEEEEEEEEEE-TTEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CC
T ss_pred EEEEEeECCCccCCEEEEEEEecC-CCCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-Ch
Confidence 999999999999999999999862 2334688999999999999999999999999999999999999999999976 77
Q ss_pred cHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 260 GVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 260 ~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
++......++..|+.+++.++|+++++++
T Consensus 243 g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 271 (396)
T 3ii9_A 243 GLRGPFTCLNSARYGIAWGALGAAESCWH 271 (396)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999874
No 12
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=2.5e-48 Score=355.25 Aligned_cols=259 Identities=36% Similarity=0.565 Sum_probs=239.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
.|++.+++++. ++++++++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|++
T Consensus 11 ~m~~~~~~~~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel 87 (396)
T 1egd_A 11 GFSFEFTEQQK-EFQATARKFAREEIIPVAAEYDKTGEYPV--PLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEEL 87 (396)
T ss_dssp EEECCCCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHCCCCH--HHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCHHHH-HHHHHHHHHHHHhCchhHHHHHhhCCCCH--HHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHH
Confidence 36678999999 99999999999988888888888899999 9999999999999999999999999999999999999
Q ss_pred HhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeee
Q 023057 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMW 185 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~ 185 (288)
+++++++++.+ .|..++...|..+|+++|+++|||++++|+.++|+++|||++|||...+.++|++++|||+|||+|.|
T Consensus 88 ~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~ 166 (396)
T 1egd_A 88 AYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMW 166 (396)
T ss_dssp HHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEE
T ss_pred HhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEc
Confidence 99999998876 56545566688999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCEEEEEEEeCCCCCC---CceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHH
Q 023057 186 CTNGPVAQTLVVYAKTDIKAGS---KGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY 262 (288)
Q Consensus 186 v~~~~~ad~~lv~a~~~~~~~~---~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~ 262 (288)
+||+..||+++|.++++++.+. .++++|+||.+.|||++.++|+++|++++++++|+|+||+||+++++|.++.++.
T Consensus 167 ~s~~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~ 246 (396)
T 1egd_A 167 ITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFK 246 (396)
T ss_dssp EETTTTCSEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHH
T ss_pred ccCCcccCEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHH
Confidence 9999999999999998654333 5788999999999999988999999999999999999999999999999999998
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 263 VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 263 ~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.....++..|+.+++.++|+++++++
T Consensus 247 ~~~~~l~~~r~~~aa~~~G~a~~al~ 272 (396)
T 1egd_A 247 VAMGAFDKERPVVAAGAVGLAQRALD 272 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999874
No 13
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.1e-47 Score=350.59 Aligned_cols=257 Identities=28% Similarity=0.513 Sum_probs=239.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEIS 106 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~ 106 (288)
|++.+++++. ++++++++|+++.+.|...++|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+++
T Consensus 15 ~~~~~~~e~~-~~~~~~r~~~~~~~~~~~~~~d~~~~~p~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela 91 (393)
T 1rx0_A 15 PSMGLNEEQK-EFQKVAFDFAAREMAPNMAEWDQKELFPV--DVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALA 91 (393)
T ss_dssp TTTTCCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHTCCCH--HHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHH-HHHHHHHHHHHHhCCccHHHHhhcCCCCH--HHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHH
Confidence 4567899999 99999999999999888888888899999 99999999999999999999999999999999999999
Q ss_pred hhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeee
Q 023057 107 RASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWC 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v 186 (288)
++++++++.+..|. .+...+..+|+++|+++|||++++|+.++|+++|||+.|||...+.|+|++++|||+|||+|.|+
T Consensus 92 ~~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~i 170 (393)
T 1rx0_A 92 TGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFI 170 (393)
T ss_dssp TTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred HhCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEee
Confidence 99999887777776 66778889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHHH
Q 023057 187 TNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMS 266 (288)
Q Consensus 187 ~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~ 266 (288)
||+..||+++|++++++ ++++++++|+||.+.|||++.+.++++|++++++++|+|+||+||+++++|..+.++.....
T Consensus 171 s~a~~Ad~~~v~a~~~~-~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~ 249 (393)
T 1rx0_A 171 SGAGESDIYVVMCRTGG-PGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVR 249 (393)
T ss_dssp ETTTTCSEEEEEEESSS-SSGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHH
T ss_pred cCCccCCEEEEEEEcCC-CCCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHH
Confidence 99999999999999864 23457899999999999999888999999999999999999999999999998889988888
Q ss_pred hhhHHHHHHHHHHHHHhhcccC
Q 023057 267 GLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 267 ~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.++..|+.+++.++|+++++++
T Consensus 250 ~l~~~r~~~aa~~~G~a~~al~ 271 (393)
T 1rx0_A 250 GLNGGRINIASCSLGAAHASVI 271 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999874
No 14
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.2e-48 Score=352.43 Aligned_cols=259 Identities=66% Similarity=1.101 Sum_probs=240.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhh
Q 023057 29 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA 108 (288)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~~~ 108 (288)
+.+++++. ++++++++|+++.+.+...+.|+.+.+|...++|++|++.||+++.+|++|||.|+++.+.+.++|+++++
T Consensus 11 ~~~~~e~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~ 89 (394)
T 1ivh_A 11 NGLSEEQR-QLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 89 (394)
T ss_dssp GTCCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHH-HHHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhh
Confidence 46899999 99999999999999988778888888887557999999999999999999999999999999999999999
Q ss_pred CCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeeeeC
Q 023057 109 SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTN 188 (288)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v~~ 188 (288)
++++++.+..|..++...+..+|+++|+++|||++++|+.++|+++|||++|||...+.++|++++|||+|||+|.|+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~ 169 (394)
T 1ivh_A 90 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITN 169 (394)
T ss_dssp CHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred chhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCC
Confidence 99999888877545677888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCC--CCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHHH
Q 023057 189 GPVAQTLVVYAKTDIK--AGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMS 266 (288)
Q Consensus 189 ~~~ad~~lv~a~~~~~--~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~ 266 (288)
+..||+++|.++++++ +++.++++|+||++.|||++.+.|+++|++++++++|+|+||+||+++++|..+.++.....
T Consensus 170 ~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~ 249 (394)
T 1ivh_A 170 GPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMS 249 (394)
T ss_dssp GGGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHH
T ss_pred CCcCCEEEEEEEeCCcccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHH
Confidence 9999999999998643 23357899999999999999999999999999999999999999999999999999988888
Q ss_pred hhhHHHHHHHHHHHHHhhcccC
Q 023057 267 GLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 267 ~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.++..|+..++.++|+++++++
T Consensus 250 ~l~~~r~~~aa~~~G~a~~al~ 271 (394)
T 1ivh_A 250 GLDLERLVLAGGPLGLMQAVLD 271 (394)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999874
No 15
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=7e-48 Score=353.06 Aligned_cols=255 Identities=27% Similarity=0.507 Sum_probs=240.9
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCC-CcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHH
Q 023057 24 AFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFP-QDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAM 102 (288)
Q Consensus 24 ~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~ 102 (288)
.+.|++.+++++. ++++.+++|+++++.+...+.|+.+.+| . ++|++|++.||+++.+ ++|||.|+++.+.+.++
T Consensus 23 ~~~m~~~l~~e~~-~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~--~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~ 98 (403)
T 3sf6_A 23 LIGINAVLSAEER-EIRDTVRSVVQRRIKPHIASWYEDGELPAR--ELAVELGELGLLGMHL-KGYGCAGMSAVAYGLAC 98 (403)
T ss_dssp HHTCGGGSCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCCHH--HHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHHH
T ss_pred hhccCCCCCHHHH-HHHHHHHHHHHHhcChhHHHHHhcCCCCHH--HHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHHH
Confidence 3568889999999 9999999999999999888889999999 9 9999999999999999 99999999999999999
Q ss_pred HHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeE
Q 023057 103 EEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGN 182 (288)
Q Consensus 103 e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~ 182 (288)
|+++++++++++.+..|..++...+..+|+++|+++|||++++|+.++|+++|||++|||...+.|+|++++|||+|||+
T Consensus 99 eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~ 178 (403)
T 3sf6_A 99 LELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGT 178 (403)
T ss_dssp HHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEE
T ss_pred HHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEE
Confidence 99999999988888777656678899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHH
Q 023057 183 KMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY 262 (288)
Q Consensus 183 k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~ 262 (288)
|.|+||+..||+++|.+++++ ++++|+||.+.|||++.+.|+++|++++++++|+|+||+||++++++. +.++.
T Consensus 179 K~~is~a~~Ad~~~v~ar~~~-----g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~ 252 (403)
T 3sf6_A 179 KMWITNGSVADVAVVWARTDE-----GIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLG 252 (403)
T ss_dssp EEEEETGGGCSEEEEEEEETT-----EEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTH
T ss_pred EEeecCCcccCEEEEEEEeCC-----ceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHH
Confidence 999999999999999999863 689999999999999999999999999999999999999999999998 78888
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 263 VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 263 ~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.....++.+|+.+++.++|+++++++
T Consensus 253 ~~~~~l~~~r~~~aa~~~G~a~~al~ 278 (403)
T 3sf6_A 253 APLRCLNEARFGIVFGALGAARDCLE 278 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999874
No 16
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=8.2e-48 Score=349.13 Aligned_cols=251 Identities=38% Similarity=0.655 Sum_probs=235.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhhC
Q 023057 30 LLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRAS 109 (288)
Q Consensus 30 ~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~~~~ 109 (288)
.+++|+. ++++++++|+++.+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|++++++
T Consensus 2 ~~~~e~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 78 (372)
T 2dvl_A 2 TLTQEQR-LVLDAVRRVAREVLYPLAPEYDRKAEYPW--PQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAAD 78 (372)
T ss_dssp -CCHHHH-HHHHHHHHHHHHTHHHHHHHHHHTTCCCH--HHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHH-HHHHHHHHHHHHhCchhHHHHHhhCCCCH--HHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcC
Confidence 4789999 99999999999888888778888899999 99999999999999999999999999999999999999999
Q ss_pred CchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeeeeCC
Q 023057 110 GSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNG 189 (288)
Q Consensus 110 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v~~~ 189 (288)
+++++.+..|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||...+.++|++++|||+|||+|.|+||+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~ 158 (372)
T 2dvl_A 79 PSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSA 158 (372)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETT
T ss_pred cHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCC
Confidence 99988887774366778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHHHhhh
Q 023057 190 PVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLD 269 (288)
Q Consensus 190 ~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~~~~ 269 (288)
..||+++|.+++++ ++++|+||++.||+++.+.|+++|++++++++|.|+||+||+++++|.++.++......++
T Consensus 159 ~~Ad~~~v~a~~~~-----g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~ 233 (372)
T 2dvl_A 159 GHAHLYVVMARTEK-----GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLD 233 (372)
T ss_dssp TTCSEEEEEEEETT-----EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHH
T ss_pred CcCCEEEEEEEeCC-----CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHH
Confidence 99999999999863 6889999999999999999999999999999999999999999999999999988888999
Q ss_pred HHHHHHHHHHHHHhhcccC
Q 023057 270 LERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 270 ~~r~~~aa~~~G~a~~al~ 288 (288)
..|+..++.++|+++++++
T Consensus 234 ~~r~~~aa~~~G~a~~al~ 252 (372)
T 2dvl_A 234 SGRVGVAAQAVGIARGAFE 252 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874
No 17
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=2.8e-48 Score=355.05 Aligned_cols=257 Identities=38% Similarity=0.651 Sum_probs=241.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCC-CcHHHHHHHHhCCCCCCCCCcCCCCCCC--CHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFP-QDVNLWKLMGNFNLHGITAPQEYGGLGL--GYLYHCIAME 103 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~~Gl~~~~~pe~~GG~g~--~~~~~~~v~e 103 (288)
|++.++++|. ++++++++|+++.+.+.+.+.|+.+.+| . ++|++|++.||+++.+|++|||.|+ ++.+.+.+.|
T Consensus 1 M~~~~~~~~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~--~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~e 77 (397)
T 3mpi_A 1 MDFNLSKELQ-MLQKEVRNFVNKKIVPFADQWDNENHFPYE--EAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTE 77 (397)
T ss_dssp CBCCCCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCCTT--TTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHH
T ss_pred CCCCCCHHHH-HHHHHHHHHHHHhCChhHHHHHhcCCCCHH--HHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHH
Confidence 5678999999 9999999999999999988899999999 9 9999999999999999999999999 9999999999
Q ss_pred HHHhhCCchhhHHHhhhhHHHH-HHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeE
Q 023057 104 EISRASGSVGLSYGAHSNLCIN-QLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGN 182 (288)
Q Consensus 104 ~l~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~ 182 (288)
+++++++++++.+..|. .+.. .+..+|+++|+++|||++.+|+.++|+++|||..|||...+.++|++++|||+|||+
T Consensus 78 ela~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~ 156 (397)
T 3mpi_A 78 EIARGSSALRVQLNMEV-LGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGS 156 (397)
T ss_dssp HHHHHCHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEE
T ss_pred HHHhhCchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEE
Confidence 99999999998888775 5555 888999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEE-eCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccH
Q 023057 183 KMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII-EKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGV 261 (288)
Q Consensus 183 k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv-~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~ 261 (288)
|.|+||+..||+++|.++++++++..++++|+| |++.|||++ +.|+++|++++++++|.|+||+||++++++.++.++
T Consensus 157 K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~ 235 (397)
T 3mpi_A 157 KTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGA 235 (397)
T ss_dssp EEEEETTTTCSSEEEEEESCGGGGGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred EEeeCCCcccCEEEEEEEcCCCCCCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchH
Confidence 999999999999999999875444557899999 999999999 999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 262 YVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 262 ~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
......++..|+..++.++|+++++++
T Consensus 236 ~~~~~~~~~~r~~~aa~~lG~a~~al~ 262 (397)
T 3mpi_A 236 RIVFGSLNHTRLSAAAGGVGLAQACLD 262 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988899999999999999999999874
No 18
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-47 Score=349.26 Aligned_cols=256 Identities=30% Similarity=0.503 Sum_probs=234.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHH
Q 023057 25 FSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEE 104 (288)
Q Consensus 25 ~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~ 104 (288)
..|++.+++++. ++++++++|+++++.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+
T Consensus 5 ~~~~~~~~~~~~-~l~~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 81 (385)
T 2eba_A 5 YALEDLLTPEEK-EVQKAARRFLEKEALPHIRDWWEEGVFPT--HLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYE 81 (385)
T ss_dssp TCGGGGSCHHHH-HHHHHHHHHHHHHTHHHHHHHHHTTCCCG--GGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred cccCCCCCHHHH-HHHHHHHHHHHHhCCccHHHHHHhCCCCH--HHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHH
Confidence 446678999999 99999999999999888888888899999 999999999999999999999999999999999999
Q ss_pred HHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCC-CCCeEEEEEeCCeEEEeeEe
Q 023057 105 ISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDV-VGMKCKADRVDGGYIINGNK 183 (288)
Q Consensus 105 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~-~~~~~~a~~~~~g~~l~G~k 183 (288)
++++++++++.+..|..++...|..+|+++|+++|||++++|+.++|+++|||++|||. ..+.|+|++++|||+|||+|
T Consensus 82 la~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K 161 (385)
T 2eba_A 82 LERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTK 161 (385)
T ss_dssp HHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEE
T ss_pred HHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeee
Confidence 99999999988887765566778899999999999999999999999999999999999 88999999999999999999
Q ss_pred eeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHH
Q 023057 184 MWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYV 263 (288)
Q Consensus 184 ~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~ 263 (288)
.|+||+..||+++|.+++++ + .+++|+||++.||+++.+.|+++|++++++++|+|+||+||+++++ ..+.++..
T Consensus 162 ~~~s~~~~Ad~~~v~a~~~~--g--~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~ 236 (385)
T 2eba_A 162 MWITNGNLAHLAVIWAKDEG--G--EVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKA 236 (385)
T ss_dssp EEEETTTTCSEEEEEEECC-------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHH
T ss_pred eccCCCcccCEEEEEEEeCC--C--cEEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHHH
Confidence 99999999999999999752 2 3889999999999999999999999999999999999999999999 67788888
Q ss_pred HHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 264 MMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 264 ~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
....++..|+.+++.++|+++++++
T Consensus 237 ~~~~l~~~r~~~aa~~~G~a~~al~ 261 (385)
T 2eba_A 237 PLSCLTQARFGIAWGAMGALEAVYE 261 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999874
No 19
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-47 Score=350.04 Aligned_cols=256 Identities=30% Similarity=0.526 Sum_probs=239.8
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHH
Q 023057 23 AAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAM 102 (288)
Q Consensus 23 ~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~ 102 (288)
....|++.+++++. ++++++++|+++++.+...+.|+.+.+|. ++|++|++.||+++.+ ++|||.|+++.+.+.++
T Consensus 18 ~~~~m~~~l~~e~~-~l~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~ 93 (399)
T 3swo_A 18 ELFDTDRLLDQDER-DIAATVRQFVDTRLKPNVEGWFESATLPS--ELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLAC 93 (399)
T ss_dssp HHHTGGGGSCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHTCCCT--THHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHH
T ss_pred ccccCCCCCCHHHH-HHHHHHHHHHHHhCChhHHHHHhhCCCCH--HHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHH
Confidence 33456778999999 99999999999999888888888999999 9999999999999999 99999999999999999
Q ss_pred HHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeE
Q 023057 103 EEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGN 182 (288)
Q Consensus 103 e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~ 182 (288)
|+++++++++++.+..|..++...+..+|+++|+++|||++.+|+.++|+++|||++|||...+.|+|++++|||+|||+
T Consensus 94 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~ 173 (399)
T 3swo_A 94 MELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGT 173 (399)
T ss_dssp HHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEE
T ss_pred HHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEE
Confidence 99999999988877777556778899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHH
Q 023057 183 KMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY 262 (288)
Q Consensus 183 k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~ 262 (288)
|.|+||+..||+++|.+++++ ++++|+||++.|||++.+.|+++|++++++++|.|+||+||+++++|. +.++.
T Consensus 174 K~~vs~a~~Ad~~~v~a~~~~-----g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~ 247 (399)
T 3swo_A 174 KMWITNGNLADVATVWAQTDD-----GIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLS 247 (399)
T ss_dssp EEEEETTTTCSEEEEEEBCTT-----SCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTH
T ss_pred EEeECCCCccCEEEEEEEeCC-----ceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHH
Confidence 999999999999999999762 588999999999999999999999999999999999999999999998 78898
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 263 VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 263 ~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.....++.+|+.+++.++|+++++++
T Consensus 248 ~~~~~l~~~r~~~aa~~~G~a~~al~ 273 (399)
T 3swo_A 248 APLSCLNEARFGIVFGALGAARDSLE 273 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999874
No 20
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=9.7e-47 Score=348.35 Aligned_cols=254 Identities=30% Similarity=0.489 Sum_probs=233.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEIS 106 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~ 106 (288)
|++.+++++. ++++++++|+++++.|...++++.+.+|. ++|++|++.||+++.+| +|||.|+++.+.+.++|+++
T Consensus 51 ~~~~l~~e~~-~l~~~~r~f~~~~~~p~~~~~~~~~~~p~--~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela 126 (436)
T 2ix5_A 51 FNDLLTPEEQ-AIRKKVRECMEKEVAPIMTEYWEKAEFPF--HITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIA 126 (436)
T ss_dssp GGGGSCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHTCCCG--GGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHH
T ss_pred cCCCCCHHHH-HHHHHHHHHHHhhCChhhHHHHhcCCCCH--HHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHH
Confidence 4457899999 99999999999999888777777788999 99999999999999999 99999999999999999999
Q ss_pred hhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeee
Q 023057 107 RASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWC 186 (288)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v 186 (288)
++++++++.+..|..++...|..+|+++|+++|||++++|+.++|+++|||++|||...+.|+|++++|||+|||+|.|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~i 206 (436)
T 2ix5_A 127 RVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWI 206 (436)
T ss_dssp HHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred hhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCC
Confidence 99999887777775466778889999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHHH
Q 023057 187 TNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMS 266 (288)
Q Consensus 187 ~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~ 266 (288)
||+..||+++|.++++++ +++++|+||.+.|||++.+.|+++|++++++++|.|+||+||++++++.. .++.....
T Consensus 207 s~a~~Ad~~lv~Ar~~~~---~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~ 282 (436)
T 2ix5_A 207 GNSTFADLLIIFARNTTT---NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSK 282 (436)
T ss_dssp ETTTTCSEEEEEEEETTT---SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHH
T ss_pred CCCcccCEEEEEEEECCC---CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHHH
Confidence 999999999999998632 36889999999999999999999999999999999999999999999865 47888888
Q ss_pred hhhHHHHHHHHHHHHHhhcccC
Q 023057 267 GLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 267 ~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.++..|+.+++.++|+++++++
T Consensus 283 ~l~~~r~~~aa~~~G~a~~al~ 304 (436)
T 2ix5_A 283 VLAVSRVMVAWQPIGISMGIYD 304 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999874
No 21
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=4.1e-47 Score=349.24 Aligned_cols=262 Identities=21% Similarity=0.255 Sum_probs=227.5
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccC------------------CCCCcHHHHHHHHhCCCCCCCCC
Q 023057 24 AFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSN------------------SFPQDVNLWKLMGNFNLHGITAP 85 (288)
Q Consensus 24 ~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~------------------~~~~~~~~~~~l~~~Gl~~~~~p 85 (288)
+.+|++.+++++. ++++++++|+++++.|...+.++.. .+|+ ++|++|++.||+++.+|
T Consensus 2 ~~~M~~~~~~~~~-~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~e~G~~~~~~P 78 (415)
T 4hr3_A 2 PGSMDFAPSARAA-ELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELD--SLKAKARAAGLWNLFLP 78 (415)
T ss_dssp -----CCCCHHHH-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHH--HHHHHHHHTTCSSTTCC
T ss_pred CCCCCCCCCHHHH-HHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHH--HHHHHHHhCCCcCcCCC
Confidence 3457889999999 9999999999998877765554332 2456 89999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhhCCchhhHH-HhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCC-CCCCC
Q 023057 86 QEYGGLGLGYLYHCIAMEEISRASGSVGLSY-GAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPN-AGSDV 163 (288)
Q Consensus 86 e~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~-~g~d~ 163 (288)
++|||.|+++.+.+.++|++++++.+..+.. ..+...+...|..+|+++|+++|||++++|+.++|+++|||+ .|||.
T Consensus 79 ~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~ 158 (415)
T 4hr3_A 79 DPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDA 158 (415)
T ss_dssp CTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSG
T ss_pred HHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCch
Confidence 9999999999999999999999875433211 122223346788999999999999999999999999999999 99999
Q ss_pred CCCeEEEEEeCCeEEEeeEeeeeeCCCC--CCEEEEEEEeCCCC-CCCceEEEEEeCCCCCeEecccccccCCCCCc--e
Q 023057 164 VGMKCKADRVDGGYIINGNKMWCTNGPV--AQTLVVYAKTDIKA-GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSD--T 238 (288)
Q Consensus 164 ~~~~~~a~~~~~g~~l~G~k~~v~~~~~--ad~~lv~a~~~~~~-~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~--~ 238 (288)
..+.|+|++++|||+|||+|.|+||+.. ||+++|.++++++. +.+++++|+||++.|||++.++|+++|+++++ +
T Consensus 159 ~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~ 238 (415)
T 4hr3_A 159 TNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGH 238 (415)
T ss_dssp GGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCE
T ss_pred hhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCe
Confidence 9999999999999999999999999966 99999999986532 34579999999999999998899999999987 9
Q ss_pred eeEEeceeeeCCCCcccCCCccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 239 CELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 239 ~~v~~~~v~vp~~~~l~~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
++|.|+||+||++++||..+.++......++.+|+.+++.++|+++++++
T Consensus 239 ~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 288 (415)
T 4hr3_A 239 GVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALE 288 (415)
T ss_dssp EEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999874
No 22
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=4.9e-46 Score=339.68 Aligned_cols=259 Identities=28% Similarity=0.466 Sum_probs=235.7
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHH
Q 023057 21 HSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCI 100 (288)
Q Consensus 21 ~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~ 100 (288)
.+.+.+|++.+++++. ++++++++|+++.+.+...+.++.+.+|. ++|++|++.||+++.+ ++|||.|+++.+.+.
T Consensus 4 ~~~~~~m~~~~~~e~~-~l~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~ 79 (392)
T 1siq_A 4 WQDPLVLEEQLTTDEI-LIRDTFRTYCQERLMPRILLANRNEVFHR--EIISEMGELGVLGPTI-KGYGCAGVSSVAYGL 79 (392)
T ss_dssp TTSTTCGGGGSCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHTCCCT--HHHHHHHHTTCSSTTC-EETTEECCCHHHHHH
T ss_pred cccccccCCCCCHHHH-HHHHHHHHHHHHhcCcchHHHHhhCCCCH--HHHHHHHhCCCCcccH-HhhCCCCCCHHHHHH
Confidence 3455667788999999 99999999999988888777788889999 9999999999999999 999999999999999
Q ss_pred HHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEe--CCeEE
Q 023057 101 AMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYI 178 (288)
Q Consensus 101 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~--~~g~~ 178 (288)
+.|+++++++++++.+..|..++...+..+|+++|+++|||++++|+.++|+++|||++|||+..+.|+|+++ +|||+
T Consensus 80 ~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~ 159 (392)
T 1siq_A 80 LARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYT 159 (392)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEE
T ss_pred HHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEE
Confidence 9999999999988766666545566788899999999999999999999999999999999999999999999 99999
Q ss_pred EeeEeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCC
Q 023057 179 INGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEG 258 (288)
Q Consensus 179 l~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~ 258 (288)
|||+|.|+||+..||+++|.+++++ +++++|+||++.|||++.+.|+++|++++++++|+|+||+||++++++..
T Consensus 160 lnG~K~~vs~~~~Ad~~~v~a~~~~----g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~- 234 (392)
T 1siq_A 160 LNGTKTWITNSPMADLFVVWARCED----GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA- 234 (392)
T ss_dssp EEEEEEEEETGGGCSEEEEEEEETT----SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-
T ss_pred EEEEEEeecCCcccCEEEEEEEECC----CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-
Confidence 9999999999999999999999863 24789999999999999999999999999999999999999999999865
Q ss_pred ccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 259 KGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 259 ~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.++......++..|+.+++.++|+++++++
T Consensus 235 ~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 264 (392)
T 1siq_A 235 SSLGGPFGCLNNARYGIAWGVLGASEFCLH 264 (392)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477777778888999999999999999874
No 23
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=4.5e-46 Score=354.98 Aligned_cols=254 Identities=34% Similarity=0.585 Sum_probs=230.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccC-CCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 27 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSN-SFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 27 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
++..++++|. ++++++++|+++.+.|...++++.+ .+|. ++|++|++.||+++.+|++|||.|+++.+.+.+.|++
T Consensus 29 ~p~~lt~eq~-~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~--~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel 105 (597)
T 3owa_A 29 TPEDFSSEHK-MIAKTTEDFIVNEVLPELEYLEQHEFDRSV--RLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKF 105 (597)
T ss_dssp CGGGCCHHHH-HHHHHHHHHHHHHTGGGHHHHTTTCHHHHH--HHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred CccCCCHHHH-HHHHHHHHHHHHhCchhHHHHHhcCCcCCH--HHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHH
Confidence 4667999999 9999999999999988877777665 5777 9999999999999999999999999999999999999
Q ss_pred HhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeC--CeEEEeeEe
Q 023057 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD--GGYIINGNK 183 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~--~g~~l~G~k 183 (288)
+++++ .+..+..|...+...+..+|+++|+++|||++++|++++|+++|||++|||...++|+|++++ |+|+|||+|
T Consensus 106 ~~~~~-~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K 184 (597)
T 3owa_A 106 SRAGG-FAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEK 184 (597)
T ss_dssp GGGTH-HHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEE
T ss_pred Hccch-HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEE
Confidence 99864 444455555455566788999999999999999999999999999999999999999999864 459999999
Q ss_pred eeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHH
Q 023057 184 MWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYV 263 (288)
Q Consensus 184 ~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~ 263 (288)
.|+||+..||+++|++++++ .++++|+||++.|||++.+.|+++|++++++++|.|+||+||.+++||..+.|+..
T Consensus 185 ~~is~a~~Ad~~lV~Art~~----~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~ 260 (597)
T 3owa_A 185 QWITNSAFADVFIVYAKIDG----EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHII 260 (597)
T ss_dssp EEEETTTTCSEEEEEEEETT----TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHH
T ss_pred EEeCCCccCCEEEEEEEeCC----CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHH
Confidence 99999999999999999864 37899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 264 MMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 264 ~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
....++.+|+.+++.++|+++++++
T Consensus 261 ~~~~l~~~R~~~aa~~lG~a~~al~ 285 (597)
T 3owa_A 261 AFNILNIGRYKLGVGTVGSAKRAVE 285 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999874
No 24
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.2e-46 Score=337.94 Aligned_cols=240 Identities=24% Similarity=0.359 Sum_probs=221.7
Q ss_pred HHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhhCCchhhHHHhhh
Q 023057 41 ESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHS 120 (288)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~ 120 (288)
+++++|+++++.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+++++++++++.+..|.
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~ 79 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPR--DLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQG 79 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCH--HHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCH--HHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 56789999999988888888899999 9999999999999999999999999999999999999999999998877775
Q ss_pred hHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeeeeCCCCCCEEEEEEE
Q 023057 121 NLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAK 200 (288)
Q Consensus 121 ~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v~~~~~ad~~lv~a~ 200 (288)
.++...|. +|+++|+++|||++++|+ ++|+++|||++|||...+.|+|++++|||+|||+|.|+||+..||+++|.++
T Consensus 80 ~~~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~ 157 (366)
T 1r2j_A 80 MAAWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGL 157 (366)
T ss_dssp HHHHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEB
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEE
Confidence 45667777 999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHH-HHhhhHHHHHHHHHH
Q 023057 201 TDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVM-MSGLDLERLVLAAGP 279 (288)
Q Consensus 201 ~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~-~~~~~~~r~~~aa~~ 279 (288)
+++ + ++++|+||++.|||++.+.|+++|++++++++|+|+||+||+++++|.++.++... ...++.+|+..++.+
T Consensus 158 ~~~--~--g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~ 233 (366)
T 1r2j_A 158 QED--G--SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGC 233 (366)
T ss_dssp CSS--S--CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHH
T ss_pred eCC--C--ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHH
Confidence 753 2 67899999999999999999999999999999999999999999999888888777 778899999999999
Q ss_pred HHHhhcccC
Q 023057 280 LGIMQAPVR 288 (288)
Q Consensus 280 ~G~a~~al~ 288 (288)
+|+++++++
T Consensus 234 ~G~a~~al~ 242 (366)
T 1r2j_A 234 VGILRACRT 242 (366)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 25
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=1.7e-45 Score=351.85 Aligned_cols=279 Identities=32% Similarity=0.550 Sum_probs=249.8
Q ss_pred cccccccccccccccccccCCCCCCCCHHHHH---HHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCC
Q 023057 6 GARSLCASFFTKKQKHSAAFSSTSLLFDDTQL---QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGI 82 (288)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~---~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~ 82 (288)
++.|+..++|.++.+.++.+.+|..+++++.+ ++++.+++|+++.+.+. +.|+...+|+ +.|+.|++.||+++
T Consensus 21 ~~~~~~~~lf~g~~~~~~~~~~p~~l~~~~~~~~~~l~~~~~~~~~~~~~~~--~~d~~~~~p~--~~~~~l~e~Gl~~l 96 (607)
T 2uxw_A 21 QSMSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA--KNDALEMVEE--TTWQGLKELGAFGL 96 (607)
T ss_dssp CCCCHHHHHTTTCCCCTTTSSCCCCCCHHHHHHHHHHHHHHHHHHHHTCCHH--HHHHHTSCCH--HHHHHHHHTTTTCT
T ss_pred CCccHHHHhcCCCCCHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHhhcCHH--HhccccCCCH--HHHHHHHHcCCcCC
Confidence 56788888999998999888877778988861 38899999998887543 3566788998 99999999999999
Q ss_pred CCCcCCCCCCCCHHHHHHHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCC
Q 023057 83 TAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSD 162 (288)
Q Consensus 83 ~~pe~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d 162 (288)
.+|++|||.|++..+...+.|+++++++++++.+..|..++...|..+|+++|+++|||++++|++++|+++|||++|||
T Consensus 97 ~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD 176 (607)
T 2uxw_A 97 QVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSD 176 (607)
T ss_dssp TSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSC
T ss_pred CCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCC
Confidence 99999999999999999999999999999988777775344678889999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeC--CeEEEeeEeeeeeCCCCCCEEEEEEEeCCCC---C--CCceEEEEEeCCCCCeEecccccccCCCC
Q 023057 163 VVGMKCKADRVD--GGYIINGNKMWCTNGPVAQTLVVYAKTDIKA---G--SKGITAFIIEKGMPGFSTAQKLDKLGMRG 235 (288)
Q Consensus 163 ~~~~~~~a~~~~--~g~~l~G~k~~v~~~~~ad~~lv~a~~~~~~---~--~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~ 235 (288)
...+.|+|++++ ++|+|||+|.|+|++..||+++|+|+++..+ + .+++++|+||++.|||++.+.|+++|+++
T Consensus 177 ~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg 256 (607)
T 2uxw_A 177 AASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKA 256 (607)
T ss_dssp GGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTT
T ss_pred cccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCC
Confidence 999999999974 4799999999999999999999999985321 1 34689999999999999999999999999
Q ss_pred CceeeEEeceeeeCCCCcccCCCccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 236 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 236 ~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
++++.|.|+||+||.+++||.++.|+..+...++.+|+.+++.++|+++++++
T Consensus 257 ~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~ 309 (607)
T 2uxw_A 257 SNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIA 309 (607)
T ss_dssp SCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999874
No 26
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.8e-45 Score=340.69 Aligned_cols=259 Identities=19% Similarity=0.304 Sum_probs=231.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCccccccccc----CCCC--CcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQS----NSFP--QDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHC 99 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~----~~~~--~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~ 99 (288)
||++.+++++. ++++.+++|+++++.|...+.++. +.+| . ++|++|++.||+++.+|++|||.|+++.+.+
T Consensus 1 ~M~~~~~~e~~-~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~ 77 (439)
T 2c12_A 1 MVDFKLSPSQL-EARRHAQAFANTVLTKASAEYSTQKDQLSRFQATR--PFYREAVRHGLIKAQVPIPLGGTMESLVHES 77 (439)
T ss_dssp -CBCCCCHHHH-HHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTH--HHHHHHHHTTTTGGGSBGGGTCCBCCHHHHH
T ss_pred CCCCCCCHHHH-HHHHHHHHHHHHhCChhHHHHhhcccccCCCCChH--HHHHHHHHCCCCCCCCChhhCCCCCCHHHHH
Confidence 47788999999 999999999999998876555543 3455 5 8999999999999999999999999999999
Q ss_pred HHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHh--cCCeeEEEEecCCCCCC-----CCCCCeEEEEE
Q 023057 100 IAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLI--SGEHVGALAMSEPNAGS-----DVVGMKCKADR 172 (288)
Q Consensus 100 ~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~--~g~~~~~~a~te~~~g~-----d~~~~~~~a~~ 172 (288)
.++|+++++++++++.+..|. ++...+..+|+++|+++|||+++ +|+.++|+++|||++|| |...+.|+|++
T Consensus 78 ~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~ 156 (439)
T 2c12_A 78 IILEELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARK 156 (439)
T ss_dssp HHHHHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEE
T ss_pred HHHHHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEE
Confidence 999999999999998877775 55667889999999999999999 69999999999999887 57778999999
Q ss_pred eCCeEEEeeEeeeeeCCC-----CCCEEEEEEEe-C----CC----CCCCceEEEEEeCCCC------CeEecccccccC
Q 023057 173 VDGGYIINGNKMWCTNGP-----VAQTLVVYAKT-D----IK----AGSKGITAFIIEKGMP------GFSTAQKLDKLG 232 (288)
Q Consensus 173 ~~~g~~l~G~k~~v~~~~-----~ad~~lv~a~~-~----~~----~~~~~~~~~lv~~~~~------gv~~~~~~~~~G 232 (288)
++|||+|||+|.|+||+. .||+++|++++ + ++ ++.+++++|+||.+.| |+++.+.|+++|
T Consensus 157 ~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G 236 (439)
T 2c12_A 157 VGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAG 236 (439)
T ss_dssp ETTEEEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSS
T ss_pred cCCEEEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccc
Confidence 999999999999999997 99999999998 5 22 2334789999999998 888989999999
Q ss_pred CCCCceeeEEeceeeeCCCCcccCCCccHH-HHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 233 MRGSDTCELVFENCFVPNENVLGQEGKGVY-VMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 233 l~~~~~~~v~~~~v~vp~~~~l~~~~~~~~-~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
++++++++|.|+||+||++++|+..+.++. +....++..|+.+++.++|+++++++
T Consensus 237 ~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~ 293 (439)
T 2c12_A 237 HITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFE 293 (439)
T ss_dssp CTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998888888 88889999999999999999999874
No 27
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.8e-45 Score=347.61 Aligned_cols=266 Identities=31% Similarity=0.543 Sum_probs=235.9
Q ss_pred ccccccccccccCCCCCCCCHHHHHHHHHHHHHHHHhhcCccccccccc-CCCCCcHHHHHHHHhCCCCCCCCCcCCCCC
Q 023057 13 SFFTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQS-NSFPQDVNLWKLMGNFNLHGITAPQEYGGL 91 (288)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~ 91 (288)
.+|... +.++.+. .+.+++|+. ++++.+++|+++.+.|..++.+.. ..+|+ ++|+.|++.||+++.+|++|||.
T Consensus 12 ~~f~~~-~~~~~~~-~~~~~~e~~-~l~~~~~~~~~~~~~p~~~~~~~~~~~~p~--~~~~~l~e~Gl~~l~vPee~GG~ 86 (577)
T 2z1q_A 12 GGWLLE-VPERVYT-PEDFDESVK-EIARTTRTFVEREVLPLLERMEHGELELNV--PLMRKAGELGLLAIDVPEEYGGL 86 (577)
T ss_dssp TGGGTS-CCSCCCC-GGGCCHHHH-HHHHHHHHHHHTTTHHHHHHHHTTCGGGHH--HHHHHHHHTTTTSTTSCGGGTCC
T ss_pred CccccC-CHHHcCC-CCCCCHHHH-HHHHHHHHHHhccCchhHHhhhcccCCCCH--HHHHHHHHCCCCCcCCChhhCCC
Confidence 344444 4444443 567899999 999999999999887775444322 36788 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEE
Q 023057 92 GLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAD 171 (288)
Q Consensus 92 g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~ 171 (288)
|+++.+.+.++|++ +.++++++.+..|..++...|..+|+++||++|||++++|+.++|+++|||++|||...+.|+|+
T Consensus 87 g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~ 165 (577)
T 2z1q_A 87 DLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRAT 165 (577)
T ss_dssp CCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEE
T ss_pred CCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEE
Confidence 99999999999999 78888888777775455667889999999999999999999999999999999999999999999
Q ss_pred Ee--CCeEEEeeEeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeC
Q 023057 172 RV--DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVP 249 (288)
Q Consensus 172 ~~--~~g~~l~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp 249 (288)
++ +++|+|||+|.|+||+..||+++|++++++ +++++|+||++.|||++.+.|+++|+++++++.|.|+||+||
T Consensus 166 ~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g----~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP 241 (577)
T 2z1q_A 166 LSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDG----EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVP 241 (577)
T ss_dssp ECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEE
T ss_pred EeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCC----CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceecc
Confidence 84 457999999999999999999999999863 478999999999999999999999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 250 NENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 250 ~~~~l~~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.+++||..+.++......++.+|+.+++.++|+++++++
T Consensus 242 ~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~ 280 (577)
T 2z1q_A 242 VENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALE 280 (577)
T ss_dssp GGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998864
No 28
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=2.6e-45 Score=339.44 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=229.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccc----cC-CCC--CcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQ----SN-SFP--QDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYH 98 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~----~~-~~~--~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~ 98 (288)
+|++.++++|. ++++++|+|+++++.|...++++ .+ .+| + ++|++|++.||+++.+|++|||.|+++.++
T Consensus 2 ~m~~~~~~e~~-~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~ 78 (438)
T 3mkh_A 2 AIDFHLSASQK-GTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQ--PTYAAAVSAGILKGQISPAHGGTGGTLIES 78 (438)
T ss_dssp CCBCCCCHHHH-HHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTH--HHHHHHHHTTTTGGGSCGGGTCCCCCHHHH
T ss_pred CCCCCCCHHHH-HHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcH--HHHHHHHhCCCCCCCCCcccCCCCCCHHHH
Confidence 47789999999 99999999999999887655432 22 455 5 899999999999999999999999999999
Q ss_pred HHHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcC--CeeEEEEecCCCCCC-----CCCCCeEEEE
Q 023057 99 CIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISG--EHVGALAMSEPNAGS-----DVVGMKCKAD 171 (288)
Q Consensus 99 ~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g--~~~~~~a~te~~~g~-----d~~~~~~~a~ 171 (288)
+.++|++++.++++++.+..+. ++...+..+|+++ +++||+++++| +.++|+++|||++|+ |...++|+|+
T Consensus 79 ~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~ 156 (438)
T 3mkh_A 79 AILVEECYSVEPSAALTIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTAR 156 (438)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEE
T ss_pred HHHHHHHHhhChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEE
Confidence 9999999999999887766654 5556677899999 99999999996 588999999999998 5888999999
Q ss_pred EeCCeEEEeeEeeeeeCCC-----CCCEEEEEEEeCC------CCCCCceEEEEEeCCC-----CC-eEecccccccCCC
Q 023057 172 RVDGGYIINGNKMWCTNGP-----VAQTLVVYAKTDI------KAGSKGITAFIIEKGM-----PG-FSTAQKLDKLGMR 234 (288)
Q Consensus 172 ~~~~g~~l~G~k~~v~~~~-----~ad~~lv~a~~~~------~~~~~~~~~~lv~~~~-----~g-v~~~~~~~~~Gl~ 234 (288)
+++|||+|||+|.|+||+. .||+++|+++++. .++..++++|+||++. || +++.+.|+++|++
T Consensus 157 ~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r 236 (438)
T 3mkh_A 157 LEGDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHT 236 (438)
T ss_dssp EETTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCT
T ss_pred EeCCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCc
Confidence 9999999999999999997 8999999999853 1123478999999875 88 9999999999999
Q ss_pred CCceeeEEeceeeeCCCCcccCCCccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 235 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 235 ~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
++++++|.|+||+||++++||..+.++......++.+|+.+++.++|+++++++
T Consensus 237 ~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~ 290 (438)
T 3mkh_A 237 SVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFD 290 (438)
T ss_dssp TCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999874
No 29
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=1e-43 Score=328.91 Aligned_cols=257 Identities=23% Similarity=0.412 Sum_probs=220.5
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCC-CCHHHHHHH
Q 023057 23 AAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLG-LGYLYHCIA 101 (288)
Q Consensus 23 ~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g-~~~~~~~~v 101 (288)
....|++.+++++. ++++++++|+. .+.+.+.+.|+.+.+|. ++|++|++.||+++.+|++|||.| .++.+++.+
T Consensus 12 ~~~~m~~~lt~e~~-~l~~~~r~~~~-~~~~~a~~~d~~~~~~~--~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v 87 (439)
T 3m9v_A 12 STTGLYAPVTPAGR-VLLDRLAAHLP-RIRSTAAEHDRDGTFPT--DTFDALRKDGLMGATVPAELGGLGVDRLYDVAVA 87 (439)
T ss_dssp CCSTTSSCSSHHHH-HHHHHHHTTHH-HHHHHHHHHHHHTCCCH--HHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHH
T ss_pred CCCCCCCCCCHHHH-HHHHHHHHHHH-HHhhhHHHHHhcCCCCH--HHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHH
Confidence 55668899999999 99999999986 47777888899999999 999999999999999999999999 899999999
Q ss_pred HHHHHhhCCchhhHHHhhhhHHHHH--HHhcCCHHH---HHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCe
Q 023057 102 MEEISRASGSVGLSYGAHSNLCINQ--LVRHGSPAQ---KDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG 176 (288)
Q Consensus 102 ~e~l~~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~---~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g 176 (288)
+|+++++++++++.+.+|...+..+ +..+|+++| |++||+++.+|+.++|+++|||+. +...+. ++++||
T Consensus 88 ~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~--~~~~~~---t~~~~g 162 (439)
T 3m9v_A 88 LLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHT--AVTTLR---PDGAGG 162 (439)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTT--CCCEEE---ECSSSC
T ss_pred HHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCC--CCCcee---eccCCE
Confidence 9999999999998877775444443 456799999 999999999999999999999974 332222 236788
Q ss_pred EEEeeEeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCccc-
Q 023057 177 YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLG- 255 (288)
Q Consensus 177 ~~l~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~- 255 (288)
|+|||+|+|+||+..||+++|+++++++++..++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++|+
T Consensus 163 ~vlnG~K~~~s~a~~Ad~~~v~art~~~~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~ 242 (439)
T 3m9v_A 163 WLLSGRKTLVSMAPVGTHFVINARTDGTDGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMR 242 (439)
T ss_dssp EEEEEEEEEETTGGGCSEEEECEEECC--CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEEC
T ss_pred EEEEeEEEeecCccccCEEEEEEEecCCCCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCC
Confidence 9999999999999999999999998765555679999999999999999999999999999999999999999999998
Q ss_pred -CCCccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 256 -QEGKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 256 -~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
..+.++.........+|+.+++.++|+++++++
T Consensus 243 ~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~ 276 (439)
T 3m9v_A 243 DPVGARNDAVLAGQTVSSVSVLGVYVGVAQAAYD 276 (439)
T ss_dssp CC--CCCGGGHHHHHHHHGGGHHHHHHHHHHHHH
T ss_pred CCCCchHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 556555433334556889999999999999874
No 30
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=327.63 Aligned_cols=257 Identities=21% Similarity=0.326 Sum_probs=218.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccc---ccccc-----CCC-----CCcHHHHHHHHhCCCCCCCCCcCCCCCC
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAA---NIDQS-----NSF-----PQDVNLWKLMGNFNLHGITAPQEYGGLG 92 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~---~~d~~-----~~~-----~~~~~~~~~l~~~Gl~~~~~pe~~GG~g 92 (288)
.|++.+++++. ++++++++|+++++.|... ++++. ..+ +. ++|++|++.||+++.+|+ |.|
T Consensus 18 ~m~~~~~~e~~-~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~Gl~~l~~P~---G~g 91 (428)
T 2wbi_A 18 GQLFVQTRKGQ-EVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVID--KLKEMAKVEGLWNLFLPA---VSG 91 (428)
T ss_dssp ----CCCHHHH-HHHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHH--HHHHHHHHTTCCSTTCHH---HHC
T ss_pred cCCCCCCHHHH-HHHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHH--HHHHHHHHCCCCeecCCC---CCC
Confidence 47788999999 9999999999998866554 44432 233 34 899999999999999999 889
Q ss_pred CCHHHHHHHHHHHHhhCCc-hhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCC-CCCCCCCCeEEE
Q 023057 93 LGYLYHCIAMEEISRASGS-VGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPN-AGSDVVGMKCKA 170 (288)
Q Consensus 93 ~~~~~~~~v~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~-~g~d~~~~~~~a 170 (288)
+++.+.+.++|++++++.+ .++....+...+...|..+|+++|+++|||++++|+.++|+++|||+ +|||...+.|+|
T Consensus 92 ~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A 171 (428)
T 2wbi_A 92 LSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSI 171 (428)
T ss_dssp CCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEE
T ss_pred CCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEE
Confidence 9999999999999999743 23222222224566788899999999999999999999999999999 999999999999
Q ss_pred EEeCCeEEEeeEeeeeeCCCC--CCEEEEEEEeCCCC--CCCceEEEEEeCCCCCeEecccccccCCCCCc---eeeEEe
Q 023057 171 DRVDGGYIINGNKMWCTNGPV--AQTLVVYAKTDIKA--GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSD---TCELVF 243 (288)
Q Consensus 171 ~~~~~g~~l~G~k~~v~~~~~--ad~~lv~a~~~~~~--~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~---~~~v~~ 243 (288)
++++|||+|||+|.|+||+.. ||+++|.++++++. +++++++|+||.+.|||++.+.|+++|+++++ +++|.|
T Consensus 172 ~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~f 251 (428)
T 2wbi_A 172 QRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHF 251 (428)
T ss_dssp EEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEE
T ss_pred EEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEe
Confidence 999999999999999999987 99999999986432 33468899999999999998899999999984 999999
Q ss_pred ceeeeCCCCcccCCCccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 244 ENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 244 ~~v~vp~~~~l~~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
+||+||++++||..+.++......++.+|+.+++.++|+++++++
T Consensus 252 ddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~ 296 (428)
T 2wbi_A 252 NQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQ 296 (428)
T ss_dssp EEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999988899888888999999999999999999874
No 31
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=4.7e-44 Score=326.78 Aligned_cols=254 Identities=23% Similarity=0.389 Sum_probs=220.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCC-CCHHHHHHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLG-LGYLYHCIAMEE 104 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g-~~~~~~~~v~e~ 104 (288)
.+.+.++++|. ++++++++|+++ +.+.+.+.|+++.+|. ++|++|++.||+++.+|++|||.| .++.+.+.++|+
T Consensus 4 ~~~~~lt~e~~-~~~~~~r~~~~~-~~~~a~~~d~~~~~p~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~ee 79 (395)
T 3mxl_A 4 DLRAPLTPAGR-TVVDLLAGVIPR-ISAEAADRDRTGTFPV--EAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMR 79 (395)
T ss_dssp SSSSCCSHHHH-HHHHHHTTTHHH-HHHHHHHHHHHTCCCH--HHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHH
T ss_pred ccccCCCHHHH-HHHHHHHHHHHH-HhhchHHHhhhCCCCH--HHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHH
Confidence 35577999999 999999999874 7788888999999999 999999999999999999999999 899999999999
Q ss_pred HHhhCCchhhHHHhhhhHHHHHH--HhcCCHHHH---HhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEE
Q 023057 105 ISRASGSVGLSYGAHSNLCINQL--VRHGSPAQK---DKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYII 179 (288)
Q Consensus 105 l~~~~~~~~~~~~~~~~~~~~~l--~~~g~~~~~---~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l 179 (288)
++++++++++.+..|...+..++ ..+|+++|| ++||+++.+|+.++|+++|||++|+ ..++ ++++|||+|
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~l 154 (395)
T 3mxl_A 80 LAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLL 154 (395)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEE
T ss_pred HHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEE
Confidence 99999999988877754444433 367999999 9999999999999999999998652 2222 236788999
Q ss_pred eeEeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCccc--CC
Q 023057 180 NGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLG--QE 257 (288)
Q Consensus 180 ~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~--~~ 257 (288)
||+|.|+||+..||+++|.++++++++.+++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++++ ..
T Consensus 155 nG~K~~is~a~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~ 234 (395)
T 3mxl_A 155 SGRKVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPV 234 (395)
T ss_dssp EEEEEEETTGGGCSEECCCEEEECTTSCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEES
T ss_pred eeEEEEecCccccCEEEEEEEeCCCCCCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCC
Confidence 9999999999999999999998765455578899999999999998999999999999999999999999999998 66
Q ss_pred CccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 258 GKGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 258 ~~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
+.++.........+|+.+++.++|+++++++
T Consensus 235 g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~ 265 (395)
T 3mxl_A 235 GARRDAVLAGQTVSSITMLGIYAGIAQAARD 265 (395)
T ss_dssp SCCCTTHHHHHHHHHGGGHHHHHHHHHHHHH
T ss_pred CccHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6665544444566899999999999999874
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=4.4e-41 Score=308.98 Aligned_cols=243 Identities=18% Similarity=0.247 Sum_probs=204.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 26 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 26 ~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
-.++.+++++. ++++++++|+++ +.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|++
T Consensus 13 ~~~~~~~~~~~-~l~~~~r~~~~~-~~~~a~~~d~~~~~p~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel 88 (414)
T 2or0_A 13 GRENLYFQGMG-RVLDRIEVVAEE-IRGQAVQSEADCRLTD--AAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGV 88 (414)
T ss_dssp ----------C-HHHHHHHHTHHH-HHHHHHHHHHHTSCCH--HHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHH
T ss_pred cccCCCCccHH-HHHHHHHHHHHH-HHHhHHHHHhcCCCCH--HHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHH
Confidence 35577899999 999999999876 7777778888899999 9999999999999999999999999999999999999
Q ss_pred HhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeee
Q 023057 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMW 185 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~ 185 (288)
+++++++++.+..|. .+...+..+|+++|+++|++ +|+.++|++++ | .++|++++|||+|||+|.|
T Consensus 89 a~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~ 154 (414)
T 2or0_A 89 AALDGASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSF 154 (414)
T ss_dssp HHHCHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEE
T ss_pred HhhChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEec
Confidence 999999988777775 66778889999999999999 69988998887 4 4799999999999999999
Q ss_pred eeCCCCCCEEEEEEEeCCCCCCC---ceEEEEEeCCCCCeEec-ccccccCCCCCceeeEEeceeeeCCCCcccC-----
Q 023057 186 CTNGPVAQTLVVYAKTDIKAGSK---GITAFIIEKGMPGFSTA-QKLDKLGMRGSDTCELVFENCFVPNENVLGQ----- 256 (288)
Q Consensus 186 v~~~~~ad~~lv~a~~~~~~~~~---~~~~~lv~~~~~gv~~~-~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~----- 256 (288)
+||+..||+++|.++++++++.+ ++++|+||++ |+++. +.|+++|++++++++|.||||+||++++++.
T Consensus 155 is~a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~ 232 (414)
T 2or0_A 155 SSGTDHCQWAFLGAMVGDGEGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMD 232 (414)
T ss_dssp ETTGGGCSEEEEEEEECC-----CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHH
T ss_pred cCCCchhhEEEEEEEecCCCCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccc
Confidence 99999999999999986433333 7899999997 89998 8899999999999999999999999999975
Q ss_pred ---CC----ccHHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 257 ---EG----KGVYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 257 ---~~----~~~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
++ .++.+....++..|+.+++.++|+++++++
T Consensus 233 g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~ 271 (414)
T 2or0_A 233 GRAQKEAGRPEPLFNMPYSCMFPLGITAAVIGITEGALA 271 (414)
T ss_dssp SHHHHHHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 233344556788999999999999999874
No 33
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=3.6e-40 Score=303.61 Aligned_cols=251 Identities=18% Similarity=0.242 Sum_probs=213.4
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCH
Q 023057 16 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGY 95 (288)
Q Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~ 95 (288)
-++-.+.-...+.+.+++ . ++++++++|++ .+.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~--~-~l~~~~r~~~~-~~~~~a~~~d~~~~~p~--~~~~~l~~~Gl~~l~~P~e~GG~g~~~ 93 (422)
T 2jbr_A 20 FQPIRLVYTHAQTPDVSG--V-SMLEKIQQILP-QIAKNAESAEQLRRVPD--ENIKLLKEIGLHRAFQPKVYGGLEMSL 93 (422)
T ss_dssp ----CCCSSSCCCCCCSS--C-CHHHHHHHHHH-HHHHTHHHHHHHTSCCH--HHHHHHHHTTGGGSSSCGGGTCCCCCH
T ss_pred hcchheeeecCCCCCCCH--H-HHHHHHHHHHH-HHHHhhHHHHHcCCCCH--HHHHHHHHCCchhcCCchhcCCCCCCH
Confidence 344444455555666666 4 67999999987 47777778888899999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCC
Q 023057 96 LYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG 175 (288)
Q Consensus 96 ~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~ 175 (288)
.+.+.++|+++++++++++.+..|. .+...+..+|+++|+++|++. |+.++|++++ | .++|++++|
T Consensus 94 ~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~ 159 (422)
T 2jbr_A 94 PDFANCIVTLAGACAGTAWAFSLLC-THSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEG 159 (422)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETT
T ss_pred HHHHHHHHHHHhhCcCHHHHHHHHH-HHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCC
Confidence 9999999999999999988776664 667788899999999999996 8888999887 3 368999999
Q ss_pred eEEEeeEeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCccc
Q 023057 176 GYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLG 255 (288)
Q Consensus 176 g~~l~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~ 255 (288)
||+|||+|.|+||+..||+++|.++++++++.+++++|+||++ |+++.+.|+++|++++++++|+|+||+||++++++
T Consensus 160 g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg 237 (422)
T 2jbr_A 160 GIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISK 237 (422)
T ss_dssp EEEEEEEEEEETTGGGCSEEEEEEEEECTTSCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEE
T ss_pred EEEEeeeEeeecCCccccEEEEEEEecCCCCCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeec
Confidence 9999999999999999999999999864334457889999997 89998889999999999999999999999999997
Q ss_pred CC--------Ccc-----HHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 256 QE--------GKG-----VYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 256 ~~--------~~~-----~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
.. +.+ +.+....+..+|+.+++.++|+++++++
T Consensus 238 ~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~ 283 (422)
T 2jbr_A 238 AKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIE 283 (422)
T ss_dssp HHHHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcccccCCCcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 63 444 4444566788999999999999999874
No 34
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=2.1e-39 Score=295.89 Aligned_cols=232 Identities=19% Similarity=0.296 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhhCCchhhHHH
Q 023057 38 QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYG 117 (288)
Q Consensus 38 ~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~ 117 (288)
++++++++|+++ +.+...+.|+.+.+|. ++|++|++.||+++.+|++|||.|+++.+.+.++|+++++++++++.+.
T Consensus 11 ~l~~~~~~~~~~-~~~~~~~~d~~~~~p~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~ 87 (394)
T 2rfq_A 11 EVMQRLDALLPT-LRERAQETEDLRRIPD--DSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSS 87 (394)
T ss_dssp HHHHHHHHHHHH-HHHTHHHHHHHTSCCH--HHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHhHHHHHhcCCCCH--HHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHH
Confidence 689999999874 7777778888899999 9999999999999999999999999999999999999999999998777
Q ss_pred hhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEeCCeEEEeeEeeeeeCCCCCCEEEE
Q 023057 118 AHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVV 197 (288)
Q Consensus 118 ~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~v~~~~~ad~~lv 197 (288)
.|. .+...+..+|+++|+++|++ +|+.++|++++ | .++|++++|||+|||+|.|+||+..||+++|
T Consensus 88 ~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v 153 (394)
T 2rfq_A 88 IIG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVL 153 (394)
T ss_dssp HHH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEE
T ss_pred HHH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEE
Confidence 765 66778889999999999999 68888999987 3 4799999999999999999999999999999
Q ss_pred EEEeCCCCCCCceEEEEEeCCCCCeEecccccccCCCCCceeeEEeceeeeCCCCcccC--------CC----ccHHHHH
Q 023057 198 YAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQ--------EG----KGVYVMM 265 (288)
Q Consensus 198 ~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~--------~~----~~~~~~~ 265 (288)
.++++++++++++++|+||++ |+++.+.|+++|++++++++|.|+||+||++++++. ++ .+..+..
T Consensus 154 ~a~~~~~g~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~ 231 (394)
T 2rfq_A 154 GGPVIKDGRPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKM 231 (394)
T ss_dssp EEEEEETTEEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGS
T ss_pred eeeecCCCCCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccc
Confidence 999842211236889999997 899988899999999999999999999999999975 22 2344445
Q ss_pred HhhhHHHHHHHHHHHHHhhcccC
Q 023057 266 SGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 266 ~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
..+...|+..++.++|+++++++
T Consensus 232 ~~~~~~r~~~aa~~~G~a~~al~ 254 (394)
T 2rfq_A 232 PWGTIHPTTISAPIVGMAYGAYD 254 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778999999999999999874
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=2.3e-34 Score=277.49 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=200.4
Q ss_pred CCC-HHHHHHHHHHHHHHHHhhcCcccccccccCCCCCcHHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhh
Q 023057 30 LLF-DDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA 108 (288)
Q Consensus 30 ~~s-~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l~~~ 108 (288)
.++ +|+. ++++++++|+++.... ....+....+++ +.|+.|++.|++. .+|+++| .+..+...+.+++
T Consensus 25 ~~~~~e~~-~lr~~vr~~l~~~~~~-~~~~~~~~~~~~--~~~~~l~~~g~l~-~~p~e~G---~~~~~~~~v~e~~--- 93 (659)
T 1w07_A 25 WAGSRHAF-EVSDRIARLVASDPVF-EKSNRARLSRKE--LFKSTLRKCAHAF-KRIIELR---LNEEEAGRLRHFI--- 93 (659)
T ss_dssp HHSSHHHH-HHHHHHHHHHHTCGGG-CCTTTTSSCHHH--HHHHHHHHHHHHH-HHHHHTT---CCHHHHHHHHHHH---
T ss_pred HCCChHHH-HHHHHHHHHHhcCccc-ccCCccCCChHH--HHHHHHHHHHHHH-HhHHHhC---CCchHHHHHHHHh---
Confidence 344 7788 9999999999875322 111122234455 8999999998887 4788887 3567777776665
Q ss_pred CCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEe--CCeEEEe-----e
Q 023057 109 SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYIIN-----G 181 (288)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~--~~g~~l~-----G 181 (288)
+.+++ +..|..++...|..+|+++|+++|||++++|+.++|+++|||++|||...++|+|+++ +|||+|| |
T Consensus 94 ~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G 171 (659)
T 1w07_A 94 DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTA 171 (659)
T ss_dssp CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGG
T ss_pred ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCe
Confidence 34444 5566446677888999999999999999999999999999999999999999999998 6899999 9
Q ss_pred EeeeeeC-CCCCCEEEEEEEeCCCCCCCceEEEEEeC-C------CCCeEecccccccC---CCCCceeeEEeceeeeCC
Q 023057 182 NKMWCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIEK-G------MPGFSTAQKLDKLG---MRGSDTCELVFENCFVPN 250 (288)
Q Consensus 182 ~k~~v~~-~~~ad~~lv~a~~~~~~~~~~~~~~lv~~-~------~~gv~~~~~~~~~G---l~~~~~~~v~~~~v~vp~ 250 (288)
+|+|++| +..||+++|+|+++.++++.++++|+||. + .|||++.+.|+++| +++++++.|.|+||+||+
T Consensus 172 ~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~ 251 (659)
T 1w07_A 172 SKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPR 251 (659)
T ss_dssp SEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEG
T ss_pred EEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECH
Confidence 9999999 89999999999986433334788999995 5 69999999999999 999999999999999999
Q ss_pred CCcccC------CCccH------HHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 251 ENVLGQ------EGKGV------YVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 251 ~~~l~~------~~~~~------~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
+++|+. .+.++ ......+..+|+.+++.++|++++|++
T Consensus 252 ~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~ 301 (659)
T 1w07_A 252 DQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVC 301 (659)
T ss_dssp GGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999985 45443 234566789999999999999998864
No 36
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.98 E-value=4.1e-32 Score=255.91 Aligned_cols=207 Identities=22% Similarity=0.343 Sum_probs=180.1
Q ss_pred cHHHHHHHHhCCCCCCCC--CcCCCCCCCCHHHHHHHHHHHHhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHh
Q 023057 67 DVNLWKLMGNFNLHGITA--PQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLI 144 (288)
Q Consensus 67 ~~~~~~~l~~~Gl~~~~~--pe~~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~ 144 (288)
.+++++.+++.||+++.+ |+++||.+ ........++..++...++..++. .+...|..+| ++|+++|+|++.
T Consensus 88 ~~~~~~~l~e~Gl~~l~~~~p~~~Gg~~----~~~~~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~ 161 (541)
T 3djl_A 88 WHLLMQALCTNRVHNLAWEEDARSGAFV----ARAARFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLL 161 (541)
T ss_dssp HHHHHHHHHHTTTTTGGGSTTCCTTHHH----HHHHHHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHT
T ss_pred HHHHHHHHHhCCcccCCCCCCCCCCcHH----HHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHh
Confidence 457889999999999999 68999543 233333444455555555655665 4566778888 999999999999
Q ss_pred cCCe-------------eEEEEecCCCCCCCCCCCeEEEEEe-CCeEEEeeEeeeeeCCCCCCEEEEEEEeCCCCCCCce
Q 023057 145 SGEH-------------VGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGI 210 (288)
Q Consensus 145 ~g~~-------------~~~~a~te~~~g~d~~~~~~~a~~~-~~g~~l~G~k~~v~~~~~ad~~lv~a~~~~~~~~~~~ 210 (288)
+|+. ++|+++|||++|||...++|+|+++ +|+|+|||+|+|+| +..||+++|+|+++ +++
T Consensus 162 sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~-----~Gi 235 (541)
T 3djl_A 162 SDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA-----GGL 235 (541)
T ss_dssp CSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET-----TEE
T ss_pred CCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC-----Cce
Confidence 9998 7899999999999999999999999 78899999999999 89999999999986 378
Q ss_pred EEEEEeCCCC-----CeEecccccccCCCCCceeeEEeceeeeCCCCcccCCCccHHHHHHhhhHHHHHHHHHHHHHhhc
Q 023057 211 TAFIIEKGMP-----GFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQA 285 (288)
Q Consensus 211 ~~~lv~~~~~-----gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~~~~l~~~~~~~~~~~~~~~~~r~~~aa~~~G~a~~ 285 (288)
++|+||++.| ||++.+.|+++|++++++++|.|+||+ ++++|.++.|+..+...++.+|+..++.++|++++
T Consensus 236 s~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~ 312 (541)
T 3djl_A 236 SCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRR 312 (541)
T ss_dssp EEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 999999999999999999999999996 78999999999999999999999999999999998
Q ss_pred ccC
Q 023057 286 PVR 288 (288)
Q Consensus 286 al~ 288 (288)
+++
T Consensus 313 al~ 315 (541)
T 3djl_A 313 AFS 315 (541)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.96 E-value=7.5e-30 Score=245.88 Aligned_cols=241 Identities=17% Similarity=0.250 Sum_probs=179.3
Q ss_pred CHHHHHHHHHHHHHHHHhhcCcccccccccCCCCCc------HHHHHHHHhCCCCCCCCCcCCCCCCCCHHHHHHHHHHH
Q 023057 32 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQD------VNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEI 105 (288)
Q Consensus 32 s~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~~~~l~~~Gl~~~~~pe~~GG~g~~~~~~~~v~e~l 105 (288)
+++.. ++++.+++|+.+. |.-..... ..+... .+..+.|.+. | +++||.+ ..+. .+.+++
T Consensus 26 ~~~~~-~~r~~~~~~l~~~--p~~~~~~~-~~~~~~e~~~~~~~~~~~l~~~-~------~~~~~~~--~~~~-~~~~~~ 91 (661)
T 2ddh_A 26 SPENT-RRRREIENLILND--PDFQHEDY-NFLTRSQRYEVAVKKSATMVKK-M------REYGISD--PEEI-MWFKNS 91 (661)
T ss_dssp SHHHH-HHHHHHHHHHHTC--GGGCCSCG-GGSCHHHHHHHHHHHHHHHHHH-H------HHTTCCC--HHHH-HHHHHH
T ss_pred ChhHH-HHHHHHHHHHhcC--cccccCCc-CCCCHHHHHHHHHHHHHHHHHH-H------HHcCCCC--chHH-HHHHHH
Confidence 45667 8899999998765 22111000 011110 0112333333 2 5567755 3332 336777
Q ss_pred HhhCCchhhHHHhhhhHHHHHHHhcCCHHHHHhhchhHhcCCeeEEEEecCCCCCCCCCCCeEEEEEe--CCeEEEe---
Q 023057 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYIIN--- 180 (288)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~~~~~~~a~~~--~~g~~l~--- 180 (288)
.....+. .+..|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||...++|+|+++ +|||+||
T Consensus 92 ~~~~~~~--~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~ 169 (661)
T 2ddh_A 92 VHRGHPE--PLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPT 169 (661)
T ss_dssp HHTTCCC--TTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCS
T ss_pred hccchhh--HHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCC
Confidence 6644333 34566546778899999999999999999999999999999999999999999999998 7899999
Q ss_pred --eEeeeeeC-CCCCCEEEEEEEeCCCCCCCceEEEEEeC-C------CCCeEecccccccCCCCCceeeEEeceeeeCC
Q 023057 181 --GNKMWCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIEK-G------MPGFSTAQKLDKLGMRGSDTCELVFENCFVPN 250 (288)
Q Consensus 181 --G~k~~v~~-~~~ad~~lv~a~~~~~~~~~~~~~~lv~~-~------~~gv~~~~~~~~~Gl~~~~~~~v~~~~v~vp~ 250 (288)
|+|+|++| +..||+++|+|+++.++++.++.+|+||. + .|||++.+.|+++|+++++++.|.|+||+||+
T Consensus 170 ~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~ 249 (661)
T 2ddh_A 170 VTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPR 249 (661)
T ss_dssp STTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEG
T ss_pred CCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECH
Confidence 99999999 88999999999986433345788999994 4 79999999999999999999999999999999
Q ss_pred CCcccCC------Ccc-----HHHHHHhhhHHHHHHHHHHHHHhhcccC
Q 023057 251 ENVLGQE------GKG-----VYVMMSGLDLERLVLAAGPLGIMQAPVR 288 (288)
Q Consensus 251 ~~~l~~~------~~~-----~~~~~~~~~~~r~~~aa~~~G~a~~al~ 288 (288)
+++|+.. +.+ +......+..+|+.+++.++|++++|++
T Consensus 250 ~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~ 298 (661)
T 2ddh_A 250 ENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACT 298 (661)
T ss_dssp GGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999863 322 4556677889999999999999998863
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=99.93 E-value=1.2e-25 Score=209.51 Aligned_cols=162 Identities=15% Similarity=0.233 Sum_probs=128.5
Q ss_pred HHHHhcCC--HHHHHhhchhHhcCCeeEEEEecCCCCC--------CCC-CCCeEEEEEeCCeEEEeeEeeeeeCCCCCC
Q 023057 125 NQLVRHGS--PAQKDKYLPKLISGEHVGALAMSEPNAG--------SDV-VGMKCKADRVDGGYIINGNKMWCTNGPVAQ 193 (288)
Q Consensus 125 ~~l~~~g~--~~~~~~~l~~~~~g~~~~~~a~te~~~g--------~d~-~~~~~~a~~~~~g~~l~G~k~~v~~~~~ad 193 (288)
..+..+|+ ++|+++||+++++|+.+.|+++|||+.+ ||+ ..++ ++++++|||+|||+|.|+||+..||
T Consensus 118 ~~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 118 EIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCS
T ss_pred hHHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccC
Confidence 34568999 9999999999999999999999999864 664 3344 8889999999999999999999999
Q ss_pred EEEEEEEeCCC-CCCCceEEEEEeCCCCCeEecc---cccc----------cCC-CC-CceeeEEeceeeeCCCCcc--c
Q 023057 194 TLVVYAKTDIK-AGSKGITAFIIEKGMPGFSTAQ---KLDK----------LGM-RG-SDTCELVFENCFVPNENVL--G 255 (288)
Q Consensus 194 ~~lv~a~~~~~-~~~~~~~~~lv~~~~~gv~~~~---~~~~----------~Gl-~~-~~~~~v~~~~v~vp~~~~l--~ 255 (288)
+++|+++++.+ +..+..++|+||.+.|||++.. .+++ +|+ +. ..++.|.||||+||++++| |
T Consensus 197 ~~iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g 276 (490)
T 1u8v_A 197 EHIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQ 276 (490)
T ss_dssp EEEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEES
T ss_pred EEEEEEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCC
Confidence 99999987532 1223578999999999999943 3433 565 53 5678899999999999998 6
Q ss_pred CCCccHHHHHHhhhHHHHHHHH-------HHHHHhhccc
Q 023057 256 QEGKGVYVMMSGLDLERLVLAA-------GPLGIMQAPV 287 (288)
Q Consensus 256 ~~~~~~~~~~~~~~~~r~~~aa-------~~~G~a~~al 287 (288)
..+.++......+...|+..++ .++|++++++
T Consensus 277 ~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~ 315 (490)
T 1u8v_A 277 EYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAA 315 (490)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777666777777776655 4467776553
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.92 E-value=3.6e-24 Score=199.26 Aligned_cols=153 Identities=20% Similarity=0.287 Sum_probs=119.8
Q ss_pred CHHHHHhhchhHhcCCeeEEEEecCCCCC--------CCCCCCeEEEE-EeCCeEEEeeEeeeeeCCCCCCEEEEEEEeC
Q 023057 132 SPAQKDKYLPKLISGEHVGALAMSEPNAG--------SDVVGMKCKAD-RVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 202 (288)
Q Consensus 132 ~~~~~~~~l~~~~~g~~~~~~a~te~~~g--------~d~~~~~~~a~-~~~~g~~l~G~k~~v~~~~~ad~~lv~a~~~ 202 (288)
.++|+++|||++++|+.+.|+++|||+.| +|+. +.++++ +++|||+|||+|.|+|| ..||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 46999999999999999999999999976 5654 455654 78999999999999999 9999999999986
Q ss_pred CCC-CCCceEEEEEeCCCCCeEec--ccccc--------cCCCC-CceeeEEeceeeeCCCCcc--cCCCccHHHH--HH
Q 023057 203 IKA-GSKGITAFIIEKGMPGFSTA--QKLDK--------LGMRG-SDTCELVFENCFVPNENVL--GQEGKGVYVM--MS 266 (288)
Q Consensus 203 ~~~-~~~~~~~~lv~~~~~gv~~~--~~~~~--------~Gl~~-~~~~~v~~~~v~vp~~~~l--~~~~~~~~~~--~~ 266 (288)
.++ ..+++++|+||.+.|||++. +.+.. +|.+. .+++.|.||||+||++++| |..+.++... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 322 23358899999999999994 23322 45554 6778899999999999998 5554444444 56
Q ss_pred hhhHHHHHHHHHHHHHhhcc
Q 023057 267 GLDLERLVLAAGPLGIMQAP 286 (288)
Q Consensus 267 ~~~~~r~~~aa~~~G~a~~a 286 (288)
.+...|+..++..+|.++.+
T Consensus 280 ~l~~~r~~~~~~~~g~a~~~ 299 (481)
T 2yyk_A 280 ALNHMAHQVVALKTAKTEAF 299 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHH
Confidence 67788888888766555543
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.88 E-value=2.3e-22 Score=187.35 Aligned_cols=155 Identities=17% Similarity=0.221 Sum_probs=118.1
Q ss_pred cCC--HHHHHhhchhHhcCCeeEEEEecCCCC--------CCCCCCCeEEEEEeCCeEEEeeEeeeeeCCCCCCEEEEEE
Q 023057 130 HGS--PAQKDKYLPKLISGEHVGALAMSEPNA--------GSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYA 199 (288)
Q Consensus 130 ~g~--~~~~~~~l~~~~~g~~~~~~a~te~~~--------g~d~~~~~~~a~~~~~g~~l~G~k~~v~~~~~ad~~lv~a 199 (288)
+|+ .+|+++||+.+++|+.++++++|||+. |||+ .+.+ .++++|||+|||+|.|+||+..||+++|++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 554 578999999999999999999999986 4676 4443 345689999999999999999999999999
Q ss_pred EeCC-CCCCCceEEEEEeCCCCCeEecccccccCC-----CC-----CceeeEEeceeeeCCCCcc--cCCCccHHHHHH
Q 023057 200 KTDI-KAGSKGITAFIIEKGMPGFSTAQKLDKLGM-----RG-----SDTCELVFENCFVPNENVL--GQEGKGVYVMMS 266 (288)
Q Consensus 200 ~~~~-~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl-----~~-----~~~~~v~~~~v~vp~~~~l--~~~~~~~~~~~~ 266 (288)
++++ .+++ .+++|+||.+.|||++...+...|. +. ..++.|.||||+||++++| |..+.++..+..
T Consensus 205 ~t~~~~~~~-~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~ 283 (515)
T 3hwc_A 205 LYRPGIPGE-QVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQR 283 (515)
T ss_dssp CCCTTCCGG-GCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHH
T ss_pred EecCCCCCC-eEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHH
Confidence 8732 2222 3889999999999998665665552 22 2378899999999999999 777777765522
Q ss_pred hhhH-------HHHHHHHHHHHHhhccc
Q 023057 267 GLDL-------ERLVLAAGPLGIMQAPV 287 (288)
Q Consensus 267 ~~~~-------~r~~~aa~~~G~a~~al 287 (288)
.+.. .++..+..++|+++.++
T Consensus 284 ~~~~~~r~~~~~~~~~a~~~lG~A~~~~ 311 (515)
T 3hwc_A 284 IFDWVHYHILIRQVLRAELIVGLAILIT 311 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 23455677788877654
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.69 E-value=1.7e-16 Score=148.11 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=112.4
Q ss_pred HHHHHhhchhHhcCCeeEEEEecCCCCCCCC-----CCCeE-EEEEeCCeEEEeeEeeeeeCCCCCCEEEEEEEeCCCCC
Q 023057 133 PAQKDKYLPKLISGEHVGALAMSEPNAGSDV-----VGMKC-KADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAG 206 (288)
Q Consensus 133 ~~~~~~~l~~~~~g~~~~~~a~te~~~g~d~-----~~~~~-~a~~~~~g~~l~G~k~~v~~~~~ad~~lv~a~~~~~~~ 206 (288)
.+...+|++.+.++++..+.++++|...... ..+.. ..++++|||+|||.|.|+||+..||+++|++++++..+
T Consensus 133 ~~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~ 212 (517)
T 4g5e_A 133 AKNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIP 212 (517)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCC
T ss_pred HHHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCC
Confidence 3567889999999999999999999743111 11112 34567899999999999999999999999998876545
Q ss_pred CCceEEEEEeCCCCCeEecccccccCCCC---------C-ceeeEEeceeeeCCCCcc--cCCCccHHHHHHhhhHHHHH
Q 023057 207 SKGITAFIIEKGMPGFSTAQKLDKLGMRG---------S-DTCELVFENCFVPNENVL--GQEGKGVYVMMSGLDLERLV 274 (288)
Q Consensus 207 ~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~---------~-~~~~v~~~~v~vp~~~~l--~~~~~~~~~~~~~~~~~r~~ 274 (288)
.+..++|+||.+.||+++.......+.+. . ..+.|.||||+||+++++ |..+.+.......+...+..
T Consensus 213 ~d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~ 292 (517)
T 4g5e_A 213 GDQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYH 292 (517)
T ss_dssp GGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHH
Confidence 55678999999999999743333322221 1 236799999999999987 77777777777777777776
Q ss_pred HHHHHHHHhh
Q 023057 275 LAAGPLGIMQ 284 (288)
Q Consensus 275 ~aa~~~G~a~ 284 (288)
.++..+|.++
T Consensus 293 ~~~~~~~~~~ 302 (517)
T 4g5e_A 293 ALIRQSVRAE 302 (517)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666555544
No 42
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=20.25 E-value=71 Score=20.98 Aligned_cols=34 Identities=12% Similarity=-0.015 Sum_probs=25.3
Q ss_pred cccccccccCCCCCCCCHHHHHHHHHHHHHHHHh
Q 023057 16 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARE 49 (288)
Q Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~ 49 (288)
+++.+++-.+...|.+++++....++++..++.+
T Consensus 41 d~~r~YE~m~Il~P~l~ee~~~~~vek~~~~i~~ 74 (77)
T 3zzp_A 41 TTPGRYEVNIVLNPNLDQSQLQNEKEIIQRALEN 74 (77)
T ss_dssp SSTTEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 4455666677778899999887788888877654
Done!