Your job contains 1 sequence.
>023061
MELQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPS
KRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCD
EDEDDNLPSMEAVEISKNNNVRAISTYFGGEEEEEEDIPDMAEYNEPDSIIENETDPATL
PSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQD
HARKTVTIEDHPHLTGKHASIHPCRHGAVMKKIIDVLVSRGVEPEVDK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023061
(288 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151566 - symbol:ATG3 "AT5G61500" species:3702... 1212 2.7e-123 1
DICTYBASE|DDB_G0277319 - symbol:atg3 "autophagy protein 3... 388 8.7e-67 2
UNIPROTKB|E1C502 - symbol:ATG3 "Autophagy-related protein... 546 1.0e-52 1
ZFIN|ZDB-GENE-030131-8576 - symbol:apg3l "APG3 autophagy ... 541 3.5e-52 1
MGI|MGI:1915091 - symbol:Atg3 "autophagy related 3" speci... 537 9.2e-52 1
UNIPROTKB|Q6GQE7 - symbol:atg3 "Ubiquitin-like-conjugatin... 533 2.4e-51 1
UNIPROTKB|Q0VCL3 - symbol:ATG3 "Ubiquitin-like-conjugatin... 532 3.1e-51 1
UNIPROTKB|F1SLS7 - symbol:ATG3 "Autophagy-related protein... 530 5.1e-51 1
UNIPROTKB|F1PJ26 - symbol:ATG3 "Autophagy-related protein... 529 6.5e-51 1
RGD|708464 - symbol:Atg3 "autophagy related 3" species:10... 529 6.5e-51 1
UNIPROTKB|Q5I0S6 - symbol:atg3 "Ubiquitin-like-conjugatin... 528 8.3e-51 1
UNIPROTKB|Q9NT62 - symbol:ATG3 "Ubiquitin-like-conjugatin... 524 2.2e-50 1
FB|FBgn0036813 - symbol:Aut1 "Aut1" species:7227 "Drosoph... 522 3.6e-50 1
WB|WBGene00021922 - symbol:atg-3 species:6239 "Caenorhabd... 407 5.5e-38 1
UNIPROTKB|Q51LD2 - symbol:ATG3 "Autophagy-related protein... 214 6.7e-36 2
POMBASE|SPBC3B9.06c - symbol:atg3 "autophagy associated p... 204 5.0e-35 2
UNIPROTKB|J9PBA1 - symbol:J9PBA1 "Autophagy-related prote... 307 2.2e-27 1
ASPGD|ASPL0000064263 - symbol:AN11004 species:162425 "Eme... 231 3.7e-19 1
CGD|CAL0005067 - symbol:orf19.6020 species:5476 "Candida ... 179 8.4e-12 1
SGD|S000005290 - symbol:ATG3 "E2-like enzyme involved in ... 161 1.1e-09 1
>TAIR|locus:2151566 [details] [associations]
symbol:ATG3 "AT5G61500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006914 "autophagy" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000902 "cell
morphogenesis" evidence=RCA] [GO:0006623 "protein targeting to
vacuole" evidence=RCA] [GO:0016049 "cell growth" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048193
"Golgi vesicle transport" evidence=RCA] Pfam:PF03987 Pfam:PF03986
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
GO:GO:0006914 EMBL:AB012239 InterPro:IPR007135 EMBL:AB073170
EMBL:BT024713 EMBL:AK226290 EMBL:AY088587 IPI:IPI00521348
RefSeq:NP_568934.1 UniGene:At.22151 PDB:3VX8 PDBsum:3VX8
ProteinModelPortal:Q0WWQ1 SMR:Q0WWQ1 STRING:Q0WWQ1 PaxDb:Q0WWQ1
PRIDE:Q0WWQ1 DNASU:836271 EnsemblPlants:AT5G61500.1 GeneID:836271
KEGG:ath:AT5G61500 TAIR:At5g61500 eggNOG:NOG237080
HOGENOM:HOG000234613 InParanoid:Q0WWQ1 KO:K08343 OMA:MLLQPEL
PhylomeDB:Q0WWQ1 ProtClustDB:CLSN2690060 Genevestigator:Q0WWQ1
InterPro:IPR019461 InterPro:IPR007134 Pfam:PF10381 Uniprot:Q0WWQ1
Length = 313
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 228/288 (79%), Positives = 256/288 (88%)
Query: 1 MELQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPS 60
M L QK + FKGTVE+IT RT+SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESG+ S
Sbjct: 1 MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60
Query: 61 KRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCD 120
KRK YLP+DKQFLITRNVPCLRRAASV E+YE AGGE+LVD+EDNDGWLATHGKPK K
Sbjct: 61 KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDK-- 118
Query: 121 EDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATL 180
E+DNLPSM+A++I++ N +++I TYFGG DIPDM E++E D+++EN DPATL
Sbjct: 119 GKEEDNLPSMDALDINEKNTIQSIPTYFGGEEDD--DIPDMEEFDEADNVVEN--DPATL 174
Query: 181 PSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQD 240
STYLVAHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLL+ EL++EDVSQD
Sbjct: 175 QSTYLVAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQD 234
Query: 241 HARKTVTIEDHPHLTGKHASIHPCRHGAVMKKIIDVLVSRGVEPEVDK 288
HARKTVTIEDHPHL GKHAS+HPCRHGAVMKKIIDVL+SRGVEPEVDK
Sbjct: 235 HARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDK 282
>DICTYBASE|DDB_G0277319 [details] [associations]
symbol:atg3 "autophagy protein 3" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
dictyBase:DDB_G0277319 Pfam:PF03987 Pfam:PF03986 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 InterPro:IPR007135 eggNOG:NOG237080 KO:K08343
InterPro:IPR019461 InterPro:IPR007134 Pfam:PF10381
RefSeq:XP_642708.2 STRING:Q550A8 EnsemblProtists:DDB0252605
GeneID:8620900 KEGG:ddi:DDB_G0277319 OMA:TYDISIT Uniprot:Q550A8
Length = 338
Score = 388 (141.6 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 84/147 (57%), Positives = 99/147 (67%)
Query: 157 DIPDMAEYNEPDSIIENETDPATLP-----STYLVAHE----------PDDDNILRTRTY 201
DIPD+ ++ + D+IIE E DPA L +T A+ D+DNILRTRTY
Sbjct: 168 DIPDLDDFQD-DNIIEEE-DPAVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTY 225
Query: 202 DISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTIEDHPHLTGKHASI 261
DISITYDKYYQTPRVWL GYDE+R LK E I ED+S+DHA KTVTI+ HPHL A I
Sbjct: 226 DISITYDKYYQTPRVWLFGYDENRKPLKPEEIFEDISEDHAHKTVTIDSHPHLGISFAYI 285
Query: 262 HPCRHGAVMKKIIDVLVSRGVEPEVDK 288
HPCRH AVMKK++D G EP VD+
Sbjct: 286 HPCRHAAVMKKLVDRQSENGKEPRVDQ 312
Score = 309 (113.8 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 77/191 (40%), Positives = 106/191 (55%)
Query: 4 QQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRK 63
QQ + + TVEK+T + S F E+GVL+ EFV AGD L KC TW+WESG+PS+
Sbjct: 6 QQAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSRNV 65
Query: 64 SYLPADKQFLITRNVPCLRRAASVEEEYEGA-GGEILVDNEDNDGWLATHGKPKAKCD-- 120
SYLP +KQFL+TRNVPC R ++E E + + EI ++++ D W+A +P D
Sbjct: 66 SYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAP--QPVGNQDDI 123
Query: 121 EDE---------DDNLPSMEAVEISK--NNNVRAISTYFGGXXXXXXDIPDMAEYNEPDS 169
EDE DD P+ +K NNN + DIPD+ ++ + D+
Sbjct: 124 EDEKVDISSLKIDDKKPNTTTTTTAKPTNNNN---NNNDDEDEDEDGDIPDLDDFQD-DN 179
Query: 170 IIENETDPATL 180
IIE E DPA L
Sbjct: 180 IIEEE-DPAVL 189
>UNIPROTKB|E1C502 [details] [associations]
symbol:ATG3 "Autophagy-related protein 3" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000045 "autophagic vacuole assembly" evidence=IEA] [GO:0000153
"cytoplasmic ubiquitin ligase complex" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0019776 "Atg8 ligase
activity" evidence=IEA] [GO:0019777 "Atg12 ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043653 "mitochondrial fragmentation involved in apoptotic
process" evidence=IEA] Pfam:PF03987 Pfam:PF03986 GO:GO:0043653
GO:GO:0015031 GO:GO:0000045 GO:GO:0016567 InterPro:IPR007135
GO:GO:0019777 KO:K08343 InterPro:IPR019461 InterPro:IPR007134
Pfam:PF10381 CTD:64422 GeneTree:ENSGT00390000010308 OMA:CSALCDE
GO:GO:0000153 GO:GO:0019776 EMBL:AADN02032821 EMBL:AADN02032822
IPI:IPI00588725 RefSeq:XP_416588.1 UniGene:Gga.12109 PRIDE:E1C502
Ensembl:ENSGALT00000024530 GeneID:418369 KEGG:gga:418369
NextBio:20821557 Uniprot:E1C502
Length = 313
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 125/277 (45%), Positives = 162/277 (58%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W SGE K K+YLP DKQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWASGEELKVKAYLPTDKQFLVT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAKCDED-EDDNLPSMEA 132
+NVPC +R +E E E +++ +D DG W+ T H E ++ L S +
Sbjct: 77 KNVPCYKRCKQMEYSDEQ---EAIIEEDDGDGGWVDTFHNAGIVGATEAVKEITLDSKDN 133
Query: 133 VEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPD- 191
++I + R+ S + DM EY E + ETD ATL + +V +
Sbjct: 134 IKIPE----RSASCE-DDDDEDEGEAADMEEYEESGLL---ETDDATLDTRQIVEVKAKV 185
Query: 192 ----DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVT 247
+D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTVT
Sbjct: 186 DVGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVT 245
Query: 248 IEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
IE+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 246 IENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 282
>ZFIN|ZDB-GENE-030131-8576 [details] [associations]
symbol:apg3l "APG3 autophagy 3-like" species:7955
"Danio rerio" [GO:0000045 "autophagic vacuole assembly"
evidence=ISS] [GO:0043653 "mitochondrial fragmentation involved in
apoptotic process" evidence=ISS] [GO:0019776 "Atg8 ligase activity"
evidence=ISS] [GO:0019777 "Atg12 ligase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] Pfam:PF03987 Pfam:PF03986 ZFIN:ZDB-GENE-030131-8576
GO:GO:0005737 GO:GO:0043653 GO:GO:0015031 GO:GO:0000045
InterPro:IPR007135 GO:GO:0019777 eggNOG:NOG237080
HOGENOM:HOG000234613 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 GeneTree:ENSGT00390000010308
HOVERGEN:HBG080876 OrthoDB:EOG4M398Z GO:GO:0019776 EMBL:BC057434
IPI:IPI00511944 RefSeq:NP_956316.1 UniGene:Dr.1496
ProteinModelPortal:Q6PFS7 STRING:Q6PFS7 DNASU:336632
Ensembl:ENSDART00000041304 GeneID:336632 KEGG:dre:336632 CTD:336632
InParanoid:Q6PFS7 NextBio:20811841 Bgee:Q6PFS7 Uniprot:Q6PFS7
Length = 317
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 124/285 (43%), Positives = 161/285 (56%)
Query: 9 GIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPA 68
G G E +T S FKE GV++ EFV AGD+LV CPTW W SGE +K K YLP
Sbjct: 10 GTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPN 69
Query: 69 DKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAKCDED-EDD 125
DKQFL+TRNVPC +R +E E E +++ +D DG W+ T H E +
Sbjct: 70 DKQFLLTRNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTFHNSGVTGVTEAVREI 126
Query: 126 NLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYL 185
+L + + ++ N A + DM EY E + ETD ATL ++ +
Sbjct: 127 SLDNKD--NMNMNVKTGACGNSGDDDDDEEGEAADMEEYEESGLL---ETDDATLDTSKM 181
Query: 186 V------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQ 239
A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L + + ED+SQ
Sbjct: 182 ADLSKTKAEAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQ 241
Query: 240 DHARKTVTIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
DH +KTVTIE+HP+L S+HPCRH VMKKII+ + G E
Sbjct: 242 DHVKKTVTIENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 286
>MGI|MGI:1915091 [details] [associations]
symbol:Atg3 "autophagy related 3" species:10090 "Mus
musculus" [GO:0000045 "autophagic vacuole assembly" evidence=IMP]
[GO:0000153 "cytoplasmic ubiquitin ligase complex" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006464
"cellular protein modification process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019776 "Atg8 ligase activity" evidence=IMP]
[GO:0019777 "Atg12 ligase activity" evidence=IDA] [GO:0019787
"small conjugating protein ligase activity" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0043653
"mitochondrial fragmentation involved in apoptotic process"
evidence=IMP] MGI:MGI:1915091 Pfam:PF03987 Pfam:PF03986
GO:GO:0005829 GO:GO:0043653 GO:GO:0015031 GO:GO:0000045
GO:GO:0016567 InterPro:IPR007135 GO:GO:0019777 eggNOG:NOG237080
HOGENOM:HOG000234613 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 CTD:64422
GeneTree:ENSGT00390000010308 HOVERGEN:HBG080876 OMA:CSALCDE
OrthoDB:EOG4M398Z GO:GO:0000153 GO:GO:0019776 EMBL:AB079386
EMBL:AK005266 EMBL:AK011409 EMBL:AK078877 EMBL:AK150914
EMBL:AK159231 EMBL:BC010809 IPI:IPI00132142 RefSeq:NP_080678.1
UniGene:Mm.41775 ProteinModelPortal:Q9CPX6 IntAct:Q9CPX6
STRING:Q9CPX6 PhosphoSite:Q9CPX6 PaxDb:Q9CPX6 PRIDE:Q9CPX6
Ensembl:ENSMUST00000023343 GeneID:67841 KEGG:mmu:67841
UCSC:uc007zii.1 InParanoid:Q9CPX6 ChiTaRS:ATG3 NextBio:325677
Bgee:Q9CPX6 CleanEx:MM_ATG3 Genevestigator:Q9CPX6
GermOnline:ENSMUSG00000022663 Uniprot:Q9CPX6
Length = 314
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 121/276 (43%), Positives = 160/276 (57%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP DKQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLATHGKPKAKCDEDEDDNLPSMEAVE 134
+NVPC +R +E E E +++ +D DG W+ T+ + + ++E+ +
Sbjct: 77 KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEI-TLESKD 132
Query: 135 ISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AH 188
K + A+ + DM EY E + ETD ATL + +V A
Sbjct: 133 SIKLQDCSALCDE--EDEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKAD 187
Query: 189 EPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTI 248
+D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTVTI
Sbjct: 188 AGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTI 247
Query: 249 EDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
E+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 248 ENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283
>UNIPROTKB|Q6GQE7 [details] [associations]
symbol:atg3 "Ubiquitin-like-conjugating enzyme ATG3"
species:8355 "Xenopus laevis" [GO:0000045 "autophagic vacuole
assembly" evidence=ISS] [GO:0019776 "Atg8 ligase activity"
evidence=ISS] [GO:0019777 "Atg12 ligase activity" evidence=ISS]
[GO:0043653 "mitochondrial fragmentation involved in apoptotic
process" evidence=ISS] Pfam:PF03987 Pfam:PF03986 GO:GO:0005737
GO:GO:0043653 GO:GO:0015031 GO:GO:0000045 InterPro:IPR007135
GO:GO:0019777 KO:K08343 InterPro:IPR019461 InterPro:IPR007134
Pfam:PF10381 CTD:64422 HOVERGEN:HBG080876 GO:GO:0019776
EMBL:BC072798 RefSeq:NP_001085459.1 UniGene:Xl.46637
ProteinModelPortal:Q6GQE7 GeneID:443885 KEGG:xla:443885
Xenbase:XB-GENE-953272 Uniprot:Q6GQE7
Length = 313
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 123/292 (42%), Positives = 168/292 (57%)
Query: 5 QKFYGIFKGTVEKITSHRTV----SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPS 60
Q + KG ++ + T S FKE GV++ EF+ AGD+LV CPTW W +GE S
Sbjct: 2 QNVFNTVKGKALEVAEYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEES 61
Query: 61 KRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAK 118
K K YLP DKQFL+T+NVPC +R +E E E +++ +D DG W+ T H +
Sbjct: 62 KIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDEQ---EAIIEEDDGDGGWVDTFHHTGLSG 118
Query: 119 CDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPA 178
E + ++E + K + A+ + DM +Y E ++EN D A
Sbjct: 119 VTEAVKEI--TLETQDCGKTTDNIAVCD---DDDDDEGEAADMEDYEE-SGLLEN--DDA 170
Query: 179 TLPSTYLV-AHEPD-----DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTEL 232
T+ ++ + A +P +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E
Sbjct: 171 TVDTSKIKEACKPKADLGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRRPLAVEN 230
Query: 233 ILEDVSQDHARKTVTIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
+ ED+SQDH +KTVTIE+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 231 MYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 282
>UNIPROTKB|Q0VCL3 [details] [associations]
symbol:ATG3 "Ubiquitin-like-conjugating enzyme ATG3"
species:9913 "Bos taurus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISS] [GO:0043653 "mitochondrial fragmentation involved in
apoptotic process" evidence=ISS] [GO:0019776 "Atg8 ligase activity"
evidence=ISS] [GO:0019777 "Atg12 ligase activity" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000153 "cytoplasmic ubiquitin
ligase complex" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03987 Pfam:PF03986 GO:GO:0043653 GO:GO:0015031
GO:GO:0000045 GO:GO:0016567 InterPro:IPR007135 GO:GO:0019777
eggNOG:NOG237080 HOGENOM:HOG000234613 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 EMBL:BC120110 IPI:IPI00694301
RefSeq:NP_001068832.1 UniGene:Bt.42695 ProteinModelPortal:Q0VCL3
STRING:Q0VCL3 PRIDE:Q0VCL3 Ensembl:ENSBTAT00000011976 GeneID:508571
KEGG:bta:508571 CTD:64422 GeneTree:ENSGT00390000010308
HOVERGEN:HBG080876 InParanoid:Q0VCL3 OMA:CSALCDE OrthoDB:EOG4M398Z
NextBio:20868579 GO:GO:0000153 GO:GO:0019776 Uniprot:Q0VCL3
Length = 314
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 123/278 (44%), Positives = 164/278 (58%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP+ KQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPSGKQFLVT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAKCDED-EDDNLPSMEA 132
+NVPC +R +E E E +++ +D DG W+ T H A E ++ L S ++
Sbjct: 77 KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGIAGITEAVKEITLESKDS 133
Query: 133 VEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAH---E 189
+++ + A+ + DM EY E + ETD ATL + +V +
Sbjct: 134 IKLQ---DCSALCEE--EEEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAK 185
Query: 190 PD---DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
D +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 186 TDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
Query: 247 TIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
TIE+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 246 TIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283
>UNIPROTKB|F1SLS7 [details] [associations]
symbol:ATG3 "Autophagy-related protein 3" species:9823 "Sus
scrofa" [GO:0043653 "mitochondrial fragmentation involved in
apoptotic process" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0019777 "Atg12 ligase activity" evidence=IEA]
[GO:0019776 "Atg8 ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0000153 "cytoplasmic
ubiquitin ligase complex" evidence=IEA] [GO:0000045 "autophagic
vacuole assembly" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] Pfam:PF03987 Pfam:PF03986 GO:GO:0043653 GO:GO:0015031
GO:GO:0000045 GO:GO:0016567 InterPro:IPR007135 GO:GO:0019777
KO:K08343 InterPro:IPR019461 InterPro:IPR007134 Pfam:PF10381
GeneTree:ENSGT00390000010308 OMA:CSALCDE GO:GO:0000153
GO:GO:0019776 EMBL:CU633371 EMBL:CU855536 RefSeq:XP_003132730.3
UniGene:Ssc.7402 Ensembl:ENSSSCT00000013054 GeneID:100157190
KEGG:ssc:100157190 Uniprot:F1SLS7
Length = 314
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 123/278 (44%), Positives = 162/278 (58%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAKCDED-EDDNLPSMEA 132
+NVPC +R +E E E +++ +D DG W+ T H A E ++ L S +
Sbjct: 77 KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGIAGITEAVKEITLESKDG 133
Query: 133 VEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAH---E 189
+++ + A+ + DM EY E + ETD ATL + +V +
Sbjct: 134 IKLQ---DCSALCEE--EEEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAK 185
Query: 190 PD---DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
D +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 186 TDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
Query: 247 TIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
TIE+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 246 TIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283
>UNIPROTKB|F1PJ26 [details] [associations]
symbol:ATG3 "Autophagy-related protein 3" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] Pfam:PF03987 Pfam:PF03986 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 InterPro:IPR007135 KO:K08343
InterPro:IPR019461 InterPro:IPR007134 Pfam:PF10381 CTD:64422
GeneTree:ENSGT00390000010308 OMA:CSALCDE EMBL:AAEX03016987
RefSeq:XP_535740.3 Ensembl:ENSCAFT00000016691 GeneID:478564
KEGG:cfa:478564 Uniprot:F1PJ26
Length = 312
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 120/276 (43%), Positives = 160/276 (57%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T
Sbjct: 15 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 74
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLATHGKPKAKCDEDEDDNLPSMEAVE 134
+NVPC +R +E E E +++ +D DG W+ T+ + + ++E+ +
Sbjct: 75 KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNAGVTGITEAVKEI-TLESKD 130
Query: 135 ISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAH---EPD 191
K + A+ + DM EY E + ETD ATL + +V + D
Sbjct: 131 SIKLQDCSAVCEE--EEEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTD 185
Query: 192 ---DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTI 248
+D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTVTI
Sbjct: 186 AGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTI 245
Query: 249 EDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
E+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 246 ENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 281
>RGD|708464 [details] [associations]
symbol:Atg3 "autophagy related 3" species:10116 "Rattus
norvegicus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO;ISS] [GO:0000153 "cytoplasmic ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006464
"cellular protein modification process" evidence=ISO] [GO:0006914
"autophagy" evidence=IEP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;ISO] [GO:0019776 "Atg8 ligase activity"
evidence=ISO;ISS] [GO:0019777 "Atg12 ligase activity"
evidence=ISO;ISS] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0043653 "mitochondrial fragmentation involved
in apoptotic process" evidence=ISO;ISS] Pfam:PF03987 RGD:708464
Pfam:PF03986 GO:GO:0005829 GO:GO:0043653 GO:GO:0015031
GO:GO:0000045 GO:GO:0016567 InterPro:IPR007135 GO:GO:0019777
eggNOG:NOG237080 HOGENOM:HOG000234613 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 CTD:64422
GeneTree:ENSGT00390000010308 HOVERGEN:HBG080876 OMA:CSALCDE
OrthoDB:EOG4M398Z GO:GO:0000153 GO:GO:0019776 EMBL:AF175224
EMBL:BC078743 IPI:IPI00191959 RefSeq:NP_599221.1 UniGene:Rn.3084
ProteinModelPortal:Q6AZ50 STRING:Q6AZ50 PhosphoSite:Q6AZ50
PRIDE:Q6AZ50 Ensembl:ENSRNOT00000002906 GeneID:171415
KEGG:rno:171415 UCSC:RGD:708464 InParanoid:Q6AZ50 NextBio:622307
Genevestigator:Q6AZ50 GermOnline:ENSRNOG00000002094 Uniprot:Q6AZ50
Length = 314
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 122/278 (43%), Positives = 162/278 (58%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAKCDED-EDDNLPSMEA 132
+NVPC +R +E E E +++ +D DG W+ T H E ++ L S ++
Sbjct: 77 KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDS 133
Query: 133 VEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------ 186
+++ ++ +V + DM EY E + ETD ATL + +V
Sbjct: 134 IKL-QDCSVLCDEE----EEEEEGEAADMEEYEESGLL---ETDEATLDTRRIVEACKAK 185
Query: 187 AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTV 246
A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTV
Sbjct: 186 ADAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTV 245
Query: 247 TIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
TIE+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 246 TIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283
>UNIPROTKB|Q5I0S6 [details] [associations]
symbol:atg3 "Ubiquitin-like-conjugating enzyme ATG3"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000045
"autophagic vacuole assembly" evidence=ISS] [GO:0019776 "Atg8
ligase activity" evidence=ISS] [GO:0019777 "Atg12 ligase activity"
evidence=ISS] [GO:0043653 "mitochondrial fragmentation involved in
apoptotic process" evidence=ISS] Pfam:PF03987 Pfam:PF03986
GO:GO:0005737 GO:GO:0043653 GO:GO:0015031 GO:GO:0000045
InterPro:IPR007135 GO:GO:0019777 eggNOG:NOG237080
HOGENOM:HOG000234613 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 CTD:64422
GeneTree:ENSGT00390000010308 HOVERGEN:HBG080876 OrthoDB:EOG4M398Z
GO:GO:0019776 EMBL:CR761175 EMBL:BC088024 RefSeq:NP_001011420.1
UniGene:Str.602 ProteinModelPortal:Q5I0S6 STRING:Q5I0S6
Ensembl:ENSXETT00000005166 GeneID:496900 KEGG:xtr:496900
Xenbase:XB-GENE-953266 InParanoid:Q5I0S6 Bgee:Q5I0S6 Uniprot:Q5I0S6
Length = 312
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 119/276 (43%), Positives = 161/276 (58%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EF+ AGD+LV CPTW W +GE SK K YLP DKQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLATHGKPKAKCDEDEDDNLPSMEAVE 134
+NVPC +R +E E E +++ +D DG W+ T E + ++E +
Sbjct: 77 KNVPCYKRCKQMEYSDEQ---EAIIEEDDGDGGWVDTFHHSLTGVTEAVKEI--TLETQD 131
Query: 135 ISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV-AHEPD-- 191
K + A+ + DM +Y E +++N D AT+ ++ + A +P
Sbjct: 132 CGKTTSNIAVDD---DDDDDEGEAADMEDYEE-SGLLDN--DDATVDTSKIKEACKPKAD 185
Query: 192 ---DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTI 248
+D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +KTVTI
Sbjct: 186 LGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRRPLTVENMYEDISQDHVKKTVTI 245
Query: 249 EDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
E+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 246 ENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 281
>UNIPROTKB|Q9NT62 [details] [associations]
symbol:ATG3 "Ubiquitin-like-conjugating enzyme ATG3"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0019777 "Atg12 ligase activity" evidence=ISS]
[GO:0019776 "Atg8 ligase activity" evidence=ISS] [GO:0043653
"mitochondrial fragmentation involved in apoptotic process"
evidence=ISS] [GO:0000045 "autophagic vacuole assembly"
evidence=ISS] [GO:0006612 "protein targeting to membrane"
evidence=ISS] [GO:0000153 "cytoplasmic ubiquitin ligase complex"
evidence=IPI] [GO:0006464 "cellular protein modification process"
evidence=IDA] [GO:0019787 "small conjugating protein ligase
activity" evidence=IDA] Pfam:PF03987 Pfam:PF03986 GO:GO:0005829
GO:GO:0043653 GO:GO:0006612 GO:GO:0000045 GO:GO:0016567
InterPro:IPR007135 GO:GO:0019777 eggNOG:NOG237080
HOGENOM:HOG000234613 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 CTD:64422 HOVERGEN:HBG080876
OMA:CSALCDE OrthoDB:EOG4M398Z GO:GO:0000153 GO:GO:0019776
EMBL:AB079384 EMBL:AF202092 EMBL:AL137515 EMBL:BC002830
EMBL:BC024221 EMBL:AK025778 IPI:IPI00022254 IPI:IPI00449201
PIR:T46276 RefSeq:NP_071933.2 UniGene:Hs.477126
ProteinModelPortal:Q9NT62 SMR:Q9NT62 IntAct:Q9NT62 STRING:Q9NT62
PhosphoSite:Q9NT62 DMDM:61212142 PaxDb:Q9NT62 PRIDE:Q9NT62
DNASU:64422 Ensembl:ENST00000283290 Ensembl:ENST00000402314
GeneID:64422 KEGG:hsa:64422 UCSC:uc003dzc.3 UCSC:uc003dzd.3
GeneCards:GC03M112251 HGNC:HGNC:20962 HPA:CAB037260 MIM:609606
neXtProt:NX_Q9NT62 PharmGKB:PA134883444 InParanoid:Q9NT62
PhylomeDB:Q9NT62 GenomeRNAi:64422 NextBio:66413 ArrayExpress:Q9NT62
Bgee:Q9NT62 CleanEx:HS_ATG3 Genevestigator:Q9NT62
GermOnline:ENSG00000144848 Uniprot:Q9NT62
Length = 314
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 121/280 (43%), Positives = 160/280 (57%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLIT 75
E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T
Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76
Query: 76 RNVPCLRRAASVEEEYEGAGGEILVDNEDNDG-WLAT-HGKPKAKCDEDEDDNLPSMEAV 133
+NVPC +R +E E E +++ +D DG W+ T H E +++ +
Sbjct: 77 KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITE-------AVKEI 126
Query: 134 EISKNNNVR---AISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAH-- 188
+ +N+R + + DM EY E + ETD ATL + +V
Sbjct: 127 TLENKDNIRLQDCSALCEEEEDEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACK 183
Query: 189 -EPD---DDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARK 244
+ D +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L E + ED+SQDH +K
Sbjct: 184 AKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKK 243
Query: 245 TVTIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRGVE 283
TVTIE+HPHL S+HPCRH VMKKII+ + G E
Sbjct: 244 TVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283
>FB|FBgn0036813 [details] [associations]
symbol:Aut1 "Aut1" species:7227 "Drosophila melanogaster"
[GO:0006914 "autophagy" evidence=IMP] Pfam:PF03987 Pfam:PF03986
GO:GO:0005737 EMBL:AE014296 GO:GO:0015031 GO:GO:0006914
InterPro:IPR007135 eggNOG:NOG237080 KO:K08343 OMA:MLLQPEL
InterPro:IPR019461 InterPro:IPR007134 Pfam:PF10381
GeneTree:ENSGT00390000010308 EMBL:AY119557 RefSeq:NP_649059.1
UniGene:Dm.11393 SMR:Q9VVS6 STRING:Q9VVS6
EnsemblMetazoa:FBtr0075055 GeneID:40044 KEGG:dme:Dmel_CG6877
CTD:40044 FlyBase:FBgn0036813 InParanoid:Q9VVS6 OrthoDB:EOG4MSBF1
ChiTaRS:Aut1 GenomeRNAi:40044 NextBio:816709 Uniprot:Q9VVS6
Length = 330
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 122/290 (42%), Positives = 155/290 (53%)
Query: 9 GIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPA 68
G E +T S F+E GVL+ EFV AGD+LV CPTW W +G+ +K K YLP
Sbjct: 10 GTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDETKTKPYLPK 69
Query: 69 DKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDD--N 126
DKQFLITRNVPC RR +E Y G ++ + + GW+ TH + ED
Sbjct: 70 DKQFLITRNVPCYRRCKQME--YVGEE-TLVEEESGDGGWVETHQLNDDGTTQLEDKICE 126
Query: 127 LPSMEAVEISKNNNVRAISTYFGGXXXXXXDIP--DMAEYNEP------DSIIENET--- 175
L E E + + GG D DM ++ E D + T
Sbjct: 127 LTMEETKEEMHTPDSDKSAPGAGGQAEDEDDDEAIDMDDFEESGMLELVDPAVATTTRKP 186
Query: 176 DPATLPSTYLVAH---EPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTEL 232
+P S A E D++L TRTYD+ I+YDKYYQTPR+W+ GYDE R L E
Sbjct: 187 EPEAKASPVAAASGDAEASGDSVLHTRTYDLHISYDKYYQTPRLWVVGYDEQRKPLTVEQ 246
Query: 233 ILEDVSQDHARKTVTIEDHPHLTGKH-ASIHPCRHGAVMKKIIDVLVSRG 281
+ EDVSQDHA+KTVT+E HPHL G + AS+HPCRH +MKKII + G
Sbjct: 247 MYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGG 296
>WB|WBGene00021922 [details] [associations]
symbol:atg-3 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
Pfam:PF03987 Pfam:PF03986 GO:GO:0008340 GO:GO:0002009 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 InterPro:IPR007135 eggNOG:NOG237080
HOGENOM:HOG000234613 KO:K08343 OMA:MLLQPEL InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 GeneTree:ENSGT00390000010308
EMBL:FO081813 RefSeq:NP_500024.1 ProteinModelPortal:Q9N369
SMR:Q9N369 IntAct:Q9N369 STRING:Q9N369 PaxDb:Q9N369
EnsemblMetazoa:Y55F3AM.4 GeneID:176921 KEGG:cel:CELE_Y55F3AM.4
CTD:176921 WormBase:Y55F3AM.4 InParanoid:Q9N369 NextBio:894590
Uniprot:Q9N369
Length = 305
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 97/266 (36%), Positives = 142/266 (53%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWE-SGEPSKRKSYLPADKQFLITRNVPCLRR 83
S F+E GVL+ E+V AGD+LV CPTW W + +PSK +++LP DKQFLITRNVPC +R
Sbjct: 26 SKFRETGVLTPEEYVAAGDHLVHHCPTWKWAGASDPSKIRTFLPIDKQFLITRNVPCHKR 85
Query: 84 AASVE--EEYEGAGGEILVDNE----DNDGWLATHGKPKA-KCDEDEDDNLPSMEAVEIS 136
+E E+ E E D E D GW+ TH K + +E+++ + A
Sbjct: 86 CKQMEYDEKLEKIINE--EDGEYQTSDETGWVDTHHYEKEHEKNEEKEQSTAPPPAAPED 143
Query: 137 KNNNVRAISTYFGGXXXXXXDIP-DMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNI 195
+++ + P D+ E D E + + + L A + +
Sbjct: 144 SDDD---------------DEEPLDLDELGLDDD--EEDPNRFVVEKKPLAAGNDNSGEV 186
Query: 196 LRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTIEDHPHLT 255
+ RTYD+ I YDKYYQ PR++L GYDE+R L E ED S DH+ KT+T+E HP +
Sbjct: 187 EKVRTYDLHICYDKYYQVPRLFLMGYDENRRPLTVEQTYEDFSADHSNKTITVEAHPSVD 246
Query: 256 GKHASIHPCRHGAVMKKIIDVLVSRG 281
++HPC+H +MK++I+ G
Sbjct: 247 LTMPTVHPCKHAEMMKRLINQYAESG 272
>UNIPROTKB|Q51LD2 [details] [associations]
symbol:ATG3 "Autophagy-related protein 3" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF03987 Pfam:PF03986 GO:GO:0005737 GO:GO:0015031 GO:GO:0006914
InterPro:IPR007135 eggNOG:NOG237080 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 EMBL:CM000230 EMBL:CM001237
RefSeq:XP_003720747.1 ProteinModelPortal:Q51LD2 STRING:Q51LD2
EnsemblFungi:MGG_17909T0 GeneID:12984780 KEGG:mgr:MGG_17909
OrthoDB:EOG4F21CM Uniprot:Q51LD2
Length = 350
Score = 214 (80.4 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 63/165 (38%), Positives = 82/165 (49%)
Query: 20 SHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNV 78
SH S F++ G ++ EFV AGD LV K PTWSW ++ S+R S+LP KQFL+TRNV
Sbjct: 19 SH--TSTFRQTGEITPEEFVAAGDYLVFKFPTWSWGDADSESRRASHLPPGKQFLVTRNV 76
Query: 79 PCLRRA-------ASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSME 131
PC RR A +EE G E D+DGWL T G ++ + + +
Sbjct: 77 PCNRRLNENFAGDAGLEEAVVDDGDEFKGSKGDDDGWLRTGGLSSSQPLKARE-----VR 131
Query: 132 AVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETD 176
V+ + N RA DIPDM E E D I +TD
Sbjct: 132 TVDDAGNAGERA-------QPDDDDDIPDM-EDEEDDEAIIRDTD 168
Score = 194 (73.4 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 47/121 (38%), Positives = 65/121 (53%)
Query: 157 DIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRV 216
DIPDM E E D I +TD + S+ RTY + I Y YY+TPR+
Sbjct: 150 DIPDM-EDEEDDEAIIRDTDASGQTSS--------------RRTYTLYIMYSPYYRTPRL 194
Query: 217 WLTGYDESRMLLKTELILEDVSQDHARKTVTIEDHPHLTG--KHASIHPCRHGAVMKKII 274
+L+GY + L ++ED+ D+ KTVT+ED P K AS+HPC+H VMK ++
Sbjct: 195 YLSGYGANGQPLPPHNMMEDIMGDYKDKTVTLEDFPFFANNIKMASVHPCKHAPVMKTLL 254
Query: 275 D 275
D
Sbjct: 255 D 255
>POMBASE|SPBC3B9.06c [details] [associations]
symbol:atg3 "autophagy associated protein Atg3"
species:4896 "Schizosaccharomyces pombe" [GO:0000045 "autophagic
vacuole assembly" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006501 "C-terminal protein
lipidation" evidence=ISO] [GO:0006623 "protein targeting to
vacuole" evidence=ISO] [GO:0006914 "autophagy" evidence=IMP]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IC] [GO:0019776
"Atg8 ligase activity" evidence=ISO] [GO:0032258 "CVT pathway"
evidence=ISO] PomBase:SPBC3B9.06c Pfam:PF03987 Pfam:PF03986
GO:GO:0005829 GO:GO:0005634 EMBL:CU329671 GO:GO:0000045
GenomeReviews:CU329671_GR GO:GO:0006995 GO:GO:0032258
InterPro:IPR007135 GO:GO:0006501 eggNOG:NOG237080
HOGENOM:HOG000234613 KO:K08343 OMA:MLLQPEL InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 GO:GO:0019776 OrthoDB:EOG4F21CM
PIR:T40345 RefSeq:NP_596664.1 ProteinModelPortal:O43035
STRING:O43035 EnsemblFungi:SPBC3B9.06c.1 GeneID:2541025
KEGG:spo:SPBC3B9.06c NextBio:20802139 Uniprot:O43035
Length = 275
Score = 204 (76.9 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 49/127 (38%), Positives = 70/127 (55%)
Query: 157 DIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRT-------RTYDISITYDK 209
D D+A + +D LP + E DDD ++ R YD+ I YDK
Sbjct: 115 DTSDIASAERLKGQSKELSDSGPLP----LKDEEDDDQMVSPVIKEDEGRYYDLYIVYDK 170
Query: 210 YYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTIEDHPHLTGKH--ASIHPCRHG 267
YY+TPR++L G++ LL + I EDVS +HA KTVT+E PH + AS+HPC+H
Sbjct: 171 YYRTPRLFLRGWNAGGQLLTMKDIYEDVSGEHAGKTVTMEPFPHYHSHNTMASVHPCKHA 230
Query: 268 AVMKKII 274
+V+ K+I
Sbjct: 231 SVLLKLI 237
Score = 191 (72.3 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 50/130 (38%), Positives = 72/130 (55%)
Query: 3 LQQKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKR 62
+ Q+ F E IT S F+ G++S EFVLAGD LVSK PTWSWE G+ +
Sbjct: 1 MAQRLTSAFLNWREHITPASKTSDFENTGMISPEEFVLAGDYLVSKFPTWSWECGD--RI 58
Query: 63 KSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDED 122
+ +LP DKQ+L+TR+V C++R ++ G E VD E +D T K D+
Sbjct: 59 RGFLPKDKQYLVTRHVFCVQRNINI-----GVNEE-WVDIETDD----TRNKD----DDQ 104
Query: 123 EDDNLPSMEA 132
+DD + S+ +
Sbjct: 105 DDDAISSIHS 114
>UNIPROTKB|J9PBA1 [details] [associations]
symbol:J9PBA1 "Autophagy-related protein 3" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] Pfam:PF03987 Pfam:PF03986 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 InterPro:IPR007135 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 GeneTree:ENSGT00390000010308
EMBL:AAEX03005419 Ensembl:ENSCAFT00000028585 Uniprot:J9PBA1
Length = 300
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 96/268 (35%), Positives = 135/268 (50%)
Query: 25 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRA 84
S F+E GV++ EFV A D+LV CP +GE K K+YLP KQ L+T+NVPC +R
Sbjct: 26 SKFEETGVITPGEFVAAEDHLVYYCPH---ATGEELKVKAYLPTGKQLLVTKNVPCYKRC 82
Query: 85 ASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDED-EDDNLPSMEAVEISKNNNV 141
+E E E ++ +D D GW+ T H A E +D L S + +++
Sbjct: 83 TQMEYSDEL---ETTIEEDDGDEGWVDTYHNTGIAGITEALKDVKLESKDNIKLQD---- 135
Query: 142 RAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV-AHEPD-----DDNI 195
I ++ DM Y E ++ TD ATL + +V A++ + +D I
Sbjct: 136 -CIVVCEEEEEEEEGEVADMEVY-EQSGLLG--TDEATLDTRKIVEAYKTETNAGGEDAI 191
Query: 196 LRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTIEDHPHLT 255
+TRTYD+ ITY KYYQTPR+WL YDE R L E + + D +E+HP L
Sbjct: 192 FQTRTYDLYITYYKYYQTPRLWLFSYDEQRQPLPLEHMKTSENSD-------LENHPCLL 244
Query: 256 GKHASIHPCRHGAVMKKIIDVLVSRGVE 283
+ RH AV+KKII + G E
Sbjct: 245 SPPLCSY--RH-AVIKKIIKTVTEGGGE 269
>ASPGD|ASPL0000064263 [details] [associations]
symbol:AN11004 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0019776 "Atg8 ligase
activity" evidence=IEA] [GO:0006501 "C-terminal protein lipidation"
evidence=IEA] [GO:0032258 "CVT pathway" evidence=IEA] [GO:0000045
"autophagic vacuole assembly" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0000422 "mitochondrion
degradation" evidence=IEA] Pfam:PF03987 Pfam:PF03986 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 EMBL:BN001304 EMBL:AACD01000131
InterPro:IPR007135 InterPro:IPR019461 InterPro:IPR007134
Pfam:PF10381 EnsemblFungi:CADANIAT00000851 OMA:KFPSWSW
Uniprot:C8VDI2
Length = 365
Score = 231 (86.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 87/266 (32%), Positives = 123/266 (46%)
Query: 22 RTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPC 80
RT S F+ G ++ EFVLAGD LV K P+WSW ++ PSKR SYLP KQFL+TR VPC
Sbjct: 20 RT-STFRTTGQITPEEFVLAGDYLVYKFPSWSWGDASSPSKRVSYLPPGKQFLVTRGVPC 78
Query: 81 LRRA-------ASVEEEYEG---AGGEILVDN-EDNDGWLATHGKPKAKCDEDEDDNLPS 129
RR A +++E +GG D +DNDGWL T G K + +
Sbjct: 79 HRRLNENFAGDAHLDDEIVRDFLSGGAGDSDGGDDNDGWLRTGGGGKR-----HESTIRD 133
Query: 130 MEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAHE 189
+ V+ S DIPDM + ++ ++II +PA ST +
Sbjct: 134 VRTVDESGKEEAEV---------EEEEDIPDMEDDDDEEAIIR---EPAGTTSTT----Q 177
Query: 190 PDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQDHARKTVTIE 249
P L TY + Y + +L+ + L E I+ D T+
Sbjct: 178 PTRTYNLYI-TYSNFYRTPRLYLSG--YLSPSEPLPPKLMMEDIVGDYKDKTV--TLEDF 232
Query: 250 DHPHLTGKHASIHPCRHGAVMKKIID 275
+ + AS+HPCRH +VMK ++D
Sbjct: 233 PWFDGSLQMASVHPCRHASVMKTLLD 258
>CGD|CAL0005067 [details] [associations]
symbol:orf19.6020 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0019776 "Atg8 ligase activity" evidence=IEA] [GO:0032258 "CVT
pathway" evidence=IEA] [GO:0006501 "C-terminal protein lipidation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] [GO:0000422 "mitochondrion degradation" evidence=IEA]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IEA]
CGD:CAL0005067 Pfam:PF03987 Pfam:PF03986 GO:GO:0005737
GO:GO:0015031 GO:GO:0006914 EMBL:AACQ01000036 EMBL:AACQ01000035
InterPro:IPR007135 eggNOG:NOG237080 KO:K08343 InterPro:IPR019461
InterPro:IPR007134 Pfam:PF10381 RefSeq:XP_718880.1
RefSeq:XP_718982.1 ProteinModelPortal:Q5ABQ7 STRING:Q5ABQ7
GeneID:3639358 GeneID:3639390 KEGG:cal:CaO19.13441
KEGG:cal:CaO19.6020 Uniprot:Q5ABQ7
Length = 333
Score = 179 (68.1 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 57/167 (34%), Positives = 83/167 (49%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSK-RKSYLPADKQFLI 74
E +T S F G +S EFV AGD LV K PTW W + P +KS+LP DKQ+L+
Sbjct: 12 EYLTPINHNSNFVTTGEISPEEFVKAGDYLVYKFPTWQWGNDCPKNLQKSFLPPDKQYLV 71
Query: 75 TRNVPCLRRAAS--VEEEYEGAGGEI---LVDNEDNDGWLATHGKPKAKCDEDEDDNLPS 129
TR+VP +RA++ E+ +GA E + ED +GW+ + K K +D D+
Sbjct: 72 TRHVPSYQRASNYLTGEDKKGANPEEDDEEEEEEDEEGWVKS--KKIHKVIDDTHDS--- 126
Query: 130 MEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETD 176
+I+K + I + I + AE E D I ++E D
Sbjct: 127 ----QINKGEEINDIDDF----------IDENAEEQEHDQIGDHELD 159
Score = 176 (67.0 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/159 (30%), Positives = 82/159 (51%)
Query: 120 DEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXD--IPDMAEYNEPDSIIENETDP 177
+E+E+D +++ +I K + S G D I + AE E D I ++E D
Sbjct: 101 EEEEEDEEGWVKSKKIHKVIDDTHDSQINKGEEINDIDDFIDENAEEQEHDQIGDHELDD 160
Query: 178 ATLPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDV 237
++ +D + R +D+ ITY Y+ P+++L G+D + + L + + ED+
Sbjct: 161 DEFDDLDII----NDSKNNKLRRFDLYITYSTSYRVPKLYLVGFDSNGIPLLPQQMFEDI 216
Query: 238 SQDHARKTVTIEDHP--HLTGKHASIHPCRHGAVMKKII 274
+ D+ KT TIE+ P H T SIHPC+H +VMK ++
Sbjct: 217 NSDYKDKTATIENLPVAHNTTS-VSIHPCKHSSVMKVLM 254
>SGD|S000005290 [details] [associations]
symbol:ATG3 "E2-like enzyme involved in autophagy and the
cytoplasm-to-vacuole tar" species:4932 "Saccharomyces cerevisiae"
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0006501 "C-terminal protein lipidation" evidence=IDA;IMP]
[GO:0032258 "CVT pathway" evidence=IMP] [GO:0000045 "autophagic
vacuole assembly" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000422
"mitochondrion degradation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0019776 "Atg8 ligase activity"
evidence=ISS;IMP;IPI] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] SGD:S000005290 Pfam:PF03987
Pfam:PF03986 GO:GO:0005829 GO:GO:0006612 GO:GO:0000045
EMBL:BK006947 GO:GO:0000422 GO:GO:0032258 InterPro:IPR007135
GO:GO:0034727 GO:GO:0006501 eggNOG:NOG237080 HOGENOM:HOG000234613
KO:K08343 OMA:MLLQPEL InterPro:IPR019461 InterPro:IPR007134
Pfam:PF10381 GeneTree:ENSGT00390000010308 GO:GO:0019776
OrthoDB:EOG4F21CM EMBL:X77395 EMBL:Z71622 PIR:S45130
RefSeq:NP_014404.3 RefSeq:NP_014411.3 PDB:2DYT PDB:3T7G PDB:4GSL
PDBsum:2DYT PDBsum:3T7G PDBsum:4GSL DIP:DIP-1190N IntAct:P40344
MINT:MINT-389035 STRING:P40344 PaxDb:P40344 PeptideAtlas:P40344
EnsemblFungi:YNR007C GeneID:855741 GeneID:855748 KEGG:sce:YNR007C
KEGG:sce:YNR014W CYGD:YNR007c EvolutionaryTrace:P40344
NextBio:980136 Genevestigator:P40344 GermOnline:YNR007C
Uniprot:P40344
Length = 310
Score = 161 (61.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/158 (31%), Positives = 75/158 (47%)
Query: 120 DEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPAT 179
D DEDD L E + S+ +V+ ST GG D D+ E + I E + + T
Sbjct: 99 DGDEDDVL---EYIG-SETEHVQ--STPAGGTKDSSID--DIDELIQDMEIKEEDENDDT 150
Query: 180 LPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKTELILEDVSQ 239
D + + R YD+ I Y Y+ P++++ G++ + L E + ED+S
Sbjct: 151 EEFNAKGGLAKD---MAQERYYDLYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMFEDISA 207
Query: 240 DHARKTVTIEDHPHLTGK--HASIHPCRHGAVMKKIID 275
D+ KT TIE P SIHPC+H VMK ++D
Sbjct: 208 DYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKILLD 245
Score = 153 (58.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 63/211 (29%), Positives = 92/211 (43%)
Query: 16 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSW--ESGEPSKRKSYLPADKQFL 73
E +T S F G ++ EFV AGD L PTW W ES + S R +LP +KQFL
Sbjct: 11 EYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWNEESSDISYR-DFLPKNKQFL 69
Query: 74 ITRNVPCLRRAASVEEEYEGAGGEILV-----DNEDND-----GWLATH------GKPKA 117
I R VPC +RA E+ E G ++++ D +++D G H G K
Sbjct: 70 IIRKVPCDKRA---EQCVEVEGPDVIMKGFAEDGDEDDVLEYIGSETEHVQSTPAGGTKD 126
Query: 118 KCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDP 177
+D D+ + ME E +N++ + GG DMA+ D I T
Sbjct: 127 SSIDDIDELIQDMEIKEEDENDDTEEFNAK-GGLAK------DMAQERYYDLYIAYSTS- 178
Query: 178 ATLPSTYLVAHEPDDDNILRTRTY-DISITY 207
+P Y+V + + + + DIS Y
Sbjct: 179 YRVPKMYIVGFNSNGSPLSPEQMFEDISADY 209
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 288 282 0.00083 115 3 11 23 0.44 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 609 (65 KB)
Total size of DFA: 221 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.30u 0.12s 24.42t Elapsed: 00:00:01
Total cpu time: 24.30u 0.12s 24.42t Elapsed: 00:00:01
Start: Sat May 11 09:06:38 2013 End: Sat May 11 09:06:39 2013