Query 023063
Match_columns 288
No_of_seqs 183 out of 1890
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:10:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023063.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023063hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3104 PTR2 Dipeptide/tripept 99.9 1.8E-25 3.9E-30 204.3 15.8 193 16-232 15-211 (498)
2 PRK10207 dipeptide/tripeptide 99.9 3.6E-23 7.9E-28 195.5 21.6 189 18-231 10-198 (489)
3 KOG1237 H+/oligopeptide sympor 99.9 1.1E-22 2.4E-27 193.6 23.1 248 17-264 32-282 (571)
4 TIGR00924 yjdL_sub1_fam amino 99.9 9.5E-22 2.1E-26 185.4 20.9 189 18-231 6-196 (475)
5 PRK15462 dipeptide/tripeptide 99.9 2.3E-21 5E-26 181.9 21.0 186 20-230 7-192 (493)
6 PRK09584 tppB putative tripept 99.9 1.1E-20 2.4E-25 179.2 21.8 186 18-228 17-202 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 99.8 2.7E-19 5.9E-24 173.2 20.8 204 36-256 1-211 (654)
8 PRK10054 putative transporter; 99.8 1E-17 2.2E-22 154.5 20.5 175 21-225 6-180 (395)
9 PRK10213 nepI ribonucleoside t 99.8 2.8E-17 6.1E-22 151.4 20.5 175 16-220 14-188 (394)
10 PRK03545 putative arabinose tr 99.8 2.5E-17 5.3E-22 151.3 19.8 175 21-225 8-182 (390)
11 KOG1330 Sugar transporter/spin 99.8 1.4E-18 3E-23 157.5 10.1 204 21-254 32-244 (493)
12 COG2814 AraJ Arabinose efflux 99.8 5.2E-17 1.1E-21 147.0 19.9 183 16-228 7-189 (394)
13 TIGR02332 HpaX 4-hydroxyphenyl 99.8 4.5E-17 9.7E-22 151.0 20.1 179 20-228 6-190 (412)
14 PF07690 MFS_1: Major Facilita 99.8 2.8E-17 6.1E-22 147.5 17.8 168 29-225 3-170 (352)
15 PRK15403 multidrug efflux syst 99.8 6.6E-17 1.4E-21 149.9 20.5 151 49-228 42-192 (413)
16 TIGR00710 efflux_Bcr_CflA drug 99.8 1E-16 2.2E-21 146.0 20.7 177 22-228 5-181 (385)
17 PRK12382 putative transporter; 99.8 1.1E-16 2.4E-21 146.9 20.5 172 22-214 15-186 (392)
18 TIGR00903 2A0129 major facilit 99.8 7.9E-17 1.7E-21 147.2 19.4 156 43-228 11-166 (368)
19 PRK11646 multidrug resistance 99.7 1.4E-16 3.1E-21 147.0 20.5 171 25-225 13-183 (400)
20 TIGR00900 2A0121 H+ Antiporter 99.7 1.3E-16 2.8E-21 143.7 19.1 174 28-226 5-178 (365)
21 PRK15402 multidrug efflux syst 99.7 2.3E-16 4.9E-21 145.6 20.4 160 37-226 28-187 (406)
22 TIGR00891 2A0112 putative sial 99.7 2.1E-16 4.5E-21 144.6 20.0 172 18-219 8-181 (405)
23 PRK14995 methyl viologen resis 99.7 2E-16 4.4E-21 149.9 20.1 178 22-228 6-183 (495)
24 PRK10504 putative transporter; 99.7 3.3E-16 7.2E-21 147.2 21.4 178 21-228 9-186 (471)
25 PRK05122 major facilitator sup 99.7 2.7E-16 5.8E-21 144.6 20.1 176 20-216 13-188 (399)
26 PRK11652 emrD multidrug resist 99.7 3.2E-16 6.9E-21 144.0 20.0 173 20-222 6-178 (394)
27 PRK11551 putative 3-hydroxyphe 99.7 4.1E-16 8.9E-21 143.6 19.6 175 19-223 12-186 (406)
28 PRK10091 MFS transport protein 99.7 5.3E-16 1.1E-20 142.2 18.8 177 22-228 3-179 (382)
29 PRK12307 putative sialic acid 99.7 1.1E-15 2.4E-20 141.6 21.1 165 20-214 16-180 (426)
30 PRK11663 regulatory protein Uh 99.7 6.2E-16 1.3E-20 144.2 18.6 165 27-221 28-192 (434)
31 PRK10642 proline/glycine betai 99.7 1.5E-15 3.2E-20 143.9 21.3 179 21-225 249-428 (490)
32 TIGR00895 2A0115 benzoate tran 99.7 1.6E-15 3.6E-20 138.1 20.9 175 21-225 16-190 (398)
33 TIGR00711 efflux_EmrB drug res 99.7 7E-16 1.5E-20 145.1 19.0 175 24-228 4-178 (485)
34 PRK10406 alpha-ketoglutarate t 99.7 1.5E-15 3.2E-20 141.5 20.3 167 31-219 31-211 (432)
35 PRK11043 putative transporter; 99.7 1.7E-15 3.6E-20 139.5 20.2 163 34-225 15-179 (401)
36 TIGR00890 2A0111 Oxalate/Forma 99.7 6.4E-16 1.4E-20 139.6 17.0 153 43-225 23-175 (377)
37 TIGR00886 2A0108 nitrite extru 99.7 2.2E-15 4.8E-20 136.5 20.6 160 23-211 2-171 (366)
38 TIGR00897 2A0118 polyol permea 99.7 4.1E-15 8.9E-20 137.3 21.9 170 20-215 11-181 (402)
39 PRK10473 multidrug efflux syst 99.7 2.9E-15 6.3E-20 137.5 20.6 168 26-223 7-174 (392)
40 TIGR00893 2A0114 d-galactonate 99.7 7.3E-16 1.6E-20 139.6 15.9 154 44-226 15-168 (399)
41 PRK09874 drug efflux system pr 99.7 4.4E-15 9.6E-20 136.6 20.9 173 23-226 15-192 (408)
42 PRK11102 bicyclomycin/multidru 99.7 1.9E-15 4E-20 137.7 18.0 157 40-226 9-165 (377)
43 PRK03699 putative transporter; 99.7 4.8E-15 1E-19 136.4 20.8 175 19-223 4-179 (394)
44 PLN00028 nitrate transmembrane 99.7 8.3E-15 1.8E-19 138.3 22.2 174 22-226 36-218 (476)
45 PRK09705 cynX putative cyanate 99.7 2.7E-15 5.8E-20 138.2 18.4 152 38-220 25-177 (393)
46 PRK03893 putative sialic acid 99.7 3.9E-15 8.5E-20 140.7 19.6 166 19-214 17-182 (496)
47 TIGR00899 2A0120 sugar efflux 99.7 3.9E-15 8.4E-20 135.2 18.8 171 29-228 4-177 (375)
48 PRK10133 L-fucose transporter; 99.7 7.2E-15 1.6E-19 137.4 20.9 153 20-199 24-176 (438)
49 TIGR01299 synapt_SV2 synaptic 99.7 5E-15 1.1E-19 145.4 20.0 152 42-222 186-350 (742)
50 PRK09556 uhpT sugar phosphate 99.7 7.8E-16 1.7E-20 144.9 13.7 156 46-225 52-210 (467)
51 PRK03633 putative MFS family t 99.7 8.5E-15 1.8E-19 134.1 20.2 156 21-206 5-160 (381)
52 TIGR00885 fucP L-fucose:H+ sym 99.7 1.1E-14 2.5E-19 134.9 20.1 173 24-223 5-203 (410)
53 TIGR00894 2A0114euk Na(+)-depe 99.7 3.1E-15 6.8E-20 140.5 16.5 149 52-227 70-219 (465)
54 COG2271 UhpC Sugar phosphate p 99.7 1.1E-15 2.3E-20 137.7 12.3 178 20-226 23-205 (448)
55 cd06174 MFS The Major Facilita 99.7 8.1E-15 1.8E-19 130.9 18.1 167 26-222 3-169 (352)
56 PRK11195 lysophospholipid tran 99.7 1.3E-14 2.8E-19 133.7 19.9 163 23-219 4-166 (393)
57 PRK10489 enterobactin exporter 99.7 1.9E-15 4E-20 140.0 14.3 173 27-224 22-194 (417)
58 TIGR00881 2A0104 phosphoglycer 99.6 1.9E-15 4.1E-20 136.6 13.5 153 45-226 17-170 (379)
59 TIGR00879 SP MFS transporter, 99.6 8.4E-15 1.8E-19 136.3 16.9 143 55-223 68-213 (481)
60 COG2271 UhpC Sugar phosphate p 99.6 1.2E-14 2.6E-19 130.9 16.5 182 21-228 251-435 (448)
61 PRK09556 uhpT sugar phosphate 99.6 2E-14 4.4E-19 135.3 18.5 178 22-226 258-448 (467)
62 PRK15011 sugar efflux transpor 99.6 4.8E-14 1E-18 129.8 20.6 175 22-226 216-390 (393)
63 PRK10077 xylE D-xylose transpo 99.6 1.9E-14 4.1E-19 135.4 18.1 152 54-223 51-211 (479)
64 TIGR00892 2A0113 monocarboxyla 99.6 2.4E-14 5.3E-19 134.4 18.8 150 47-226 43-193 (455)
65 TIGR00882 2A0105 oligosacchari 99.6 4.8E-14 1E-18 129.7 20.0 180 22-225 2-181 (396)
66 TIGR00805 oat sodium-independe 99.6 3.8E-15 8.3E-20 144.9 12.7 200 21-227 31-281 (633)
67 PRK15034 nitrate/nitrite trans 99.6 8.5E-14 1.8E-18 129.8 20.9 178 24-226 35-231 (462)
68 PRK15011 sugar efflux transpor 99.6 9.7E-14 2.1E-18 127.7 21.0 178 22-228 15-195 (393)
69 PRK11273 glpT sn-glycerol-3-ph 99.6 3.1E-14 6.8E-19 133.4 18.0 154 44-223 50-204 (452)
70 PRK09952 shikimate transporter 99.6 5.7E-14 1.2E-18 131.2 19.5 176 20-217 20-210 (438)
71 PRK10642 proline/glycine betai 99.6 5.4E-14 1.2E-18 133.2 18.8 174 22-217 16-203 (490)
72 TIGR00887 2A0109 phosphate:H+ 99.6 1.1E-13 2.3E-18 131.6 20.0 144 54-220 52-218 (502)
73 PRK03699 putative transporter; 99.6 7.3E-14 1.6E-18 128.5 18.3 171 22-222 205-375 (394)
74 TIGR00712 glpT glycerol-3-phos 99.6 4.6E-14 1E-18 131.7 16.5 156 45-226 49-205 (438)
75 PRK09528 lacY galactoside perm 99.6 9.1E-14 2E-18 128.9 18.2 182 22-227 10-191 (420)
76 PRK09952 shikimate transporter 99.6 1.7E-13 3.7E-18 128.1 19.6 181 21-226 249-432 (438)
77 PRK15075 citrate-proton sympor 99.6 2.1E-13 4.5E-18 127.2 20.1 172 20-213 13-198 (434)
78 TIGR00806 rfc RFC reduced fola 99.6 1.6E-13 3.4E-18 126.8 18.9 152 43-225 46-201 (511)
79 COG2223 NarK Nitrate/nitrite t 99.6 1.3E-13 2.7E-18 124.4 17.0 188 20-236 12-202 (417)
80 PRK05122 major facilitator sup 99.6 1.7E-13 3.7E-18 126.0 18.1 170 32-233 226-395 (399)
81 TIGR00898 2A0119 cation transp 99.6 6.2E-14 1.3E-18 133.0 15.4 145 48-224 114-261 (505)
82 TIGR00899 2A0120 sugar efflux 99.6 2.8E-13 6.1E-18 123.0 19.0 165 31-225 208-372 (375)
83 cd06174 MFS The Major Facilita 99.6 3.7E-13 8.1E-18 120.1 19.3 172 24-224 177-349 (352)
84 TIGR00883 2A0106 metabolite-pr 99.6 1.1E-13 2.3E-18 125.8 15.1 168 22-215 219-389 (394)
85 KOG3764 Vesicular amine transp 99.5 2.5E-14 5.5E-19 127.7 10.1 165 52-244 100-267 (464)
86 PRK09705 cynX putative cyanate 99.5 8.6E-13 1.9E-17 121.5 20.5 177 22-228 205-382 (393)
87 TIGR00890 2A0111 Oxalate/Forma 99.5 3.1E-13 6.8E-18 122.0 17.3 170 23-220 206-375 (377)
88 KOG2532 Permease of the major 99.5 3.6E-13 7.9E-18 126.1 18.0 157 52-235 67-224 (466)
89 TIGR00896 CynX cyanate transpo 99.5 1.4E-13 3.1E-18 124.6 14.9 145 43-218 20-166 (355)
90 TIGR00901 2A0125 AmpG-related 99.5 5.8E-13 1.2E-17 120.6 18.8 153 45-225 11-176 (356)
91 TIGR00902 2A0127 phenyl propri 99.5 7.1E-13 1.5E-17 121.5 19.2 157 27-215 9-167 (382)
92 PRK08633 2-acyl-glycerophospho 99.5 6.7E-13 1.5E-17 137.5 20.8 155 22-202 9-165 (1146)
93 PRK11902 ampG muropeptide tran 99.5 1.5E-12 3.3E-17 120.1 21.0 167 28-222 5-177 (402)
94 PRK03893 putative sialic acid 99.5 7.3E-13 1.6E-17 125.2 19.2 149 40-215 293-441 (496)
95 TIGR00893 2A0114 d-galactonate 99.5 9.8E-13 2.1E-17 119.1 19.0 180 22-224 215-396 (399)
96 PRK11273 glpT sn-glycerol-3-ph 99.5 9.6E-13 2.1E-17 123.4 18.9 178 22-225 253-433 (452)
97 PRK11010 ampG muropeptide tran 99.5 3.2E-12 7E-17 121.2 21.9 178 20-225 10-193 (491)
98 TIGR01299 synapt_SV2 synaptic 99.5 8E-13 1.7E-17 130.0 18.3 133 63-225 600-732 (742)
99 PRK06814 acylglycerophosphoeth 99.5 1.5E-12 3.2E-17 135.1 20.9 137 58-222 52-190 (1140)
100 TIGR00792 gph sugar (Glycoside 99.5 5.2E-13 1.1E-17 124.1 15.8 174 32-226 9-193 (437)
101 KOG0254 Predicted transporter 99.5 1.7E-12 3.8E-17 123.7 19.6 154 40-222 64-225 (513)
102 PRK11551 putative 3-hydroxyphe 99.5 2.2E-12 4.7E-17 118.9 19.4 165 29-223 227-392 (406)
103 PF00854 PTR2: POT family; In 99.5 6.2E-14 1.3E-18 128.3 9.0 153 89-257 1-155 (372)
104 PRK03545 putative arabinose tr 99.5 4.3E-12 9.3E-17 116.5 21.0 174 24-227 207-380 (390)
105 TIGR00889 2A0110 nucleoside tr 99.5 1.2E-12 2.6E-17 121.6 17.4 177 26-228 212-403 (418)
106 PTZ00207 hypothetical protein; 99.5 4.7E-12 1E-16 121.3 21.3 160 38-225 43-203 (591)
107 PRK12382 putative transporter; 99.5 1.4E-12 3.1E-17 119.7 16.5 161 33-225 227-387 (392)
108 PRK09874 drug efflux system pr 99.5 3E-12 6.5E-17 117.7 18.4 163 34-225 231-396 (408)
109 PRK11128 putative 3-phenylprop 99.5 2.8E-12 6.1E-17 117.5 18.0 156 31-220 13-172 (382)
110 PRK03633 putative MFS family t 99.5 4.7E-12 1E-16 116.0 19.3 155 36-223 214-368 (381)
111 PRK09528 lacY galactoside perm 99.5 7.7E-13 1.7E-17 122.7 14.3 163 34-225 235-401 (420)
112 PLN00028 nitrate transmembrane 99.5 2.1E-12 4.6E-17 122.0 17.4 176 23-227 253-433 (476)
113 TIGR00891 2A0112 putative sial 99.5 1.4E-12 3.1E-17 119.2 15.8 155 29-211 245-400 (405)
114 PRK10489 enterobactin exporter 99.5 2.3E-12 5E-17 119.3 17.3 160 38-226 239-398 (417)
115 COG2223 NarK Nitrate/nitrite t 99.5 1.1E-12 2.3E-17 118.4 14.2 186 21-229 217-403 (417)
116 PRK11663 regulatory protein Uh 99.5 4.3E-12 9.3E-17 118.4 18.4 178 23-226 244-423 (434)
117 PRK15075 citrate-proton sympor 99.5 3.1E-12 6.8E-17 119.3 17.3 152 29-206 245-398 (434)
118 TIGR00897 2A0118 polyol permea 99.5 7.4E-12 1.6E-16 115.6 19.7 177 22-225 222-399 (402)
119 KOG0255 Synaptic vesicle trans 99.5 1.5E-12 3.1E-17 124.3 15.1 140 51-222 111-250 (521)
120 PRK10406 alpha-ketoglutarate t 99.5 4.8E-12 1E-16 117.9 18.1 169 31-225 252-422 (432)
121 TIGR00892 2A0113 monocarboxyla 99.5 7E-12 1.5E-16 117.8 19.3 174 22-224 241-418 (455)
122 TIGR00902 2A0127 phenyl propri 99.4 1E-11 2.3E-16 113.8 19.6 169 22-222 205-374 (382)
123 TIGR01301 GPH_sucrose GPH fami 99.4 7.2E-12 1.6E-16 117.6 18.5 196 23-229 5-220 (477)
124 TIGR00880 2_A_01_02 Multidrug 99.4 6.7E-13 1.4E-17 102.8 9.7 131 66-225 6-136 (141)
125 PRK11010 ampG muropeptide tran 99.4 2.4E-11 5.3E-16 115.2 20.3 180 24-228 224-404 (491)
126 TIGR00883 2A0106 metabolite-pr 99.4 8.1E-12 1.8E-16 113.5 16.5 155 45-220 15-184 (394)
127 PF11700 ATG22: Vacuole efflux 99.4 2.1E-11 4.6E-16 114.8 19.4 185 21-226 280-467 (477)
128 PRK10504 putative transporter; 99.4 1.6E-11 3.4E-16 115.5 18.2 157 23-205 262-418 (471)
129 TIGR00879 SP MFS transporter, 99.4 1.4E-11 3E-16 114.7 17.6 166 41-226 303-469 (481)
130 COG0738 FucP Fucose permease [ 99.4 3.8E-11 8.3E-16 107.9 18.6 135 41-201 31-165 (422)
131 PF06609 TRI12: Fungal trichot 99.4 1.5E-11 3.3E-16 117.4 17.0 154 43-227 64-217 (599)
132 TIGR00712 glpT glycerol-3-phos 99.4 1.3E-11 2.8E-16 115.3 16.3 182 22-227 251-433 (438)
133 COG2814 AraJ Arabinose efflux 99.4 6E-11 1.3E-15 107.8 19.8 179 20-228 209-387 (394)
134 TIGR00894 2A0114euk Na(+)-depe 99.4 4.4E-11 9.5E-16 112.4 19.7 178 21-225 260-448 (465)
135 PF05977 MFS_3: Transmembrane 99.4 5.2E-11 1.1E-15 113.4 19.1 177 27-228 15-191 (524)
136 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2.3E-11 4.9E-16 112.9 16.2 164 23-215 243-409 (412)
137 TIGR01272 gluP glucose/galacto 99.4 4E-11 8.7E-16 107.1 17.0 162 22-215 140-303 (310)
138 PRK09669 putative symporter Ya 99.4 2.1E-11 4.5E-16 114.1 15.2 171 29-220 16-197 (444)
139 TIGR00900 2A0121 H+ Antiporter 99.3 4.4E-11 9.5E-16 107.6 16.4 155 22-204 210-365 (365)
140 PRK15034 nitrate/nitrite trans 99.3 8.8E-11 1.9E-15 109.7 18.7 187 22-227 252-454 (462)
141 PRK15402 multidrug efflux syst 99.3 2.6E-10 5.7E-15 105.2 21.8 169 23-216 216-384 (406)
142 PRK12307 putative sialic acid 99.3 1.2E-10 2.6E-15 107.9 18.6 144 37-208 246-389 (426)
143 PRK14995 methyl viologen resis 99.3 5.4E-11 1.2E-15 112.9 16.3 154 22-201 259-412 (495)
144 TIGR00711 efflux_EmrB drug res 99.3 4E-11 8.6E-16 112.9 15.3 156 22-202 255-410 (485)
145 PRK10091 MFS transport protein 99.3 1.5E-10 3.2E-15 106.1 18.7 170 24-223 201-372 (382)
146 PRK11128 putative 3-phenylprop 99.3 2.3E-10 5.1E-15 104.8 19.5 167 22-220 205-372 (382)
147 KOG2504 Monocarboxylate transp 99.3 2.2E-11 4.8E-16 115.4 12.9 174 25-228 45-222 (509)
148 KOG0569 Permease of the major 99.3 1.3E-10 2.8E-15 108.6 17.6 140 61-226 63-204 (485)
149 TIGR00881 2A0104 phosphoglycer 99.3 4.7E-11 1E-15 107.9 14.3 162 22-209 216-379 (379)
150 KOG4686 Predicted sugar transp 99.3 1.5E-10 3.2E-15 99.7 16.0 156 18-204 260-416 (459)
151 TIGR00889 2A0110 nucleoside tr 99.3 3.2E-10 7E-15 105.4 19.8 164 27-220 7-173 (418)
152 PRK10429 melibiose:sodium symp 99.3 1.1E-10 2.3E-15 110.3 16.6 147 29-197 13-164 (473)
153 TIGR00896 CynX cyanate transpo 99.3 1.9E-10 4.1E-15 104.2 17.4 154 22-204 197-350 (355)
154 TIGR00882 2A0105 oligosacchari 99.3 1.3E-10 2.7E-15 107.0 16.3 170 23-221 216-389 (396)
155 TIGR02718 sider_RhtX_FptX side 99.3 3.4E-10 7.4E-15 103.9 18.7 175 24-221 210-385 (390)
156 TIGR00792 gph sugar (Glycoside 99.3 7E-11 1.5E-15 109.8 14.2 162 22-206 222-384 (437)
157 PF13347 MFS_2: MFS/sugar tran 99.3 1.9E-11 4.1E-16 113.9 10.0 203 32-254 11-225 (428)
158 TIGR00710 efflux_Bcr_CflA drug 99.3 7.4E-10 1.6E-14 100.8 20.3 162 23-209 207-368 (385)
159 TIGR00788 fbt folate/biopterin 99.3 4.5E-10 9.8E-15 106.0 19.0 176 23-225 27-207 (468)
160 TIGR00895 2A0115 benzoate tran 99.3 2.1E-10 4.7E-15 104.3 16.4 147 23-199 251-397 (398)
161 KOG2533 Permease of the major 99.3 2.7E-10 5.9E-15 107.3 16.9 153 51-232 74-232 (495)
162 PRK10213 nepI ribonucleoside t 99.3 1.2E-09 2.5E-14 100.8 20.8 165 22-217 216-381 (394)
163 KOG2615 Permease of the major 99.2 8.7E-11 1.9E-15 104.8 12.2 117 55-201 65-181 (451)
164 PRK10077 xylE D-xylose transpo 99.2 1.5E-09 3.3E-14 102.1 21.4 157 44-226 293-456 (479)
165 PRK10133 L-fucose transporter; 99.2 4.3E-10 9.3E-15 105.2 17.5 165 24-220 260-426 (438)
166 TIGR02718 sider_RhtX_FptX side 99.2 6.9E-10 1.5E-14 101.9 18.6 179 24-228 3-185 (390)
167 PRK11462 putative transporter; 99.2 6.2E-10 1.3E-14 104.8 17.8 149 29-198 16-168 (460)
168 PRK11902 ampG muropeptide tran 99.2 1.5E-09 3.2E-14 100.2 20.0 155 43-226 230-389 (402)
169 TIGR00887 2A0109 phosphate:H+ 99.2 3.6E-10 7.8E-15 107.4 15.9 166 30-221 296-483 (502)
170 PRK09848 glucuronide transport 99.2 8E-10 1.7E-14 103.5 17.6 150 29-198 15-173 (448)
171 COG2270 Permeases of the major 99.2 2.6E-10 5.7E-15 103.2 13.6 175 23-226 253-428 (438)
172 PF00083 Sugar_tr: Sugar (and 99.2 1.8E-13 3.8E-18 127.9 -7.3 138 58-221 46-186 (451)
173 PRK09848 glucuronide transport 99.2 6E-10 1.3E-14 104.3 16.5 163 22-205 228-391 (448)
174 PF05977 MFS_3: Transmembrane 99.2 1.5E-09 3.3E-14 103.4 19.3 169 27-224 223-391 (524)
175 PRK08633 2-acyl-glycerophospho 99.2 6.4E-10 1.4E-14 115.4 18.0 163 23-214 233-397 (1146)
176 PRK10429 melibiose:sodium symp 99.2 6.3E-10 1.4E-14 105.1 15.9 165 22-205 231-396 (473)
177 PRK10054 putative transporter; 99.2 6E-10 1.3E-14 102.8 15.1 169 23-220 207-377 (395)
178 PF13347 MFS_2: MFS/sugar tran 99.2 9.4E-10 2E-14 102.4 16.4 162 22-205 225-387 (428)
179 PRK11646 multidrug resistance 99.2 1.5E-09 3.3E-14 100.3 16.7 152 40-220 226-381 (400)
180 PRK06814 acylglycerophosphoeth 99.2 8.6E-10 1.9E-14 114.6 16.6 182 22-214 225-409 (1140)
181 TIGR00903 2A0129 major facilit 99.2 2.8E-09 6.1E-14 97.5 18.0 166 22-223 192-361 (368)
182 PRK11195 lysophospholipid tran 99.1 4.9E-09 1.1E-13 96.6 19.2 159 36-224 219-377 (393)
183 KOG0252 Inorganic phosphate tr 99.1 2.3E-10 5E-15 104.3 9.5 121 55-197 81-205 (538)
184 TIGR00901 2A0125 AmpG-related 99.1 1.9E-09 4E-14 97.6 15.4 145 23-186 210-355 (356)
185 COG2807 CynX Cyanate permease 99.1 7.1E-09 1.5E-13 92.3 18.4 171 22-221 208-379 (395)
186 COG2807 CynX Cyanate permease 99.1 4.5E-09 9.8E-14 93.5 16.8 160 35-226 25-185 (395)
187 KOG2504 Monocarboxylate transp 99.1 1.9E-09 4E-14 102.4 14.9 176 22-227 298-476 (509)
188 PRK11043 putative transporter; 99.1 2.4E-08 5.2E-13 91.9 21.4 148 33-206 214-361 (401)
189 PF07690 MFS_1: Major Facilita 99.1 1.4E-09 3.1E-14 97.4 12.7 141 27-193 211-352 (352)
190 TIGR00898 2A0119 cation transp 99.1 2.5E-09 5.5E-14 101.4 14.2 142 52-225 352-493 (505)
191 PRK11102 bicyclomycin/multidru 99.1 3.3E-08 7.1E-13 90.0 20.7 148 24-197 196-344 (377)
192 COG2211 MelB Na+/melibiose sym 99.0 1.1E-08 2.4E-13 95.0 16.7 206 29-255 19-237 (467)
193 KOG2532 Permease of the major 99.0 1.1E-08 2.4E-13 96.0 16.6 180 22-226 258-446 (466)
194 PRK10473 multidrug efflux syst 99.0 7E-08 1.5E-12 88.6 20.4 70 40-110 221-290 (392)
195 PF05631 DUF791: Protein of un 99.0 6.3E-08 1.4E-12 86.6 19.2 159 45-229 56-218 (354)
196 PRK09669 putative symporter Ya 99.0 1.3E-08 2.8E-13 95.2 15.8 161 23-205 230-391 (444)
197 KOG0253 Synaptic vesicle trans 99.0 2.3E-08 5.1E-13 89.2 15.8 199 29-261 84-284 (528)
198 TIGR00886 2A0108 nitrite extru 99.0 7.4E-09 1.6E-13 93.7 12.7 140 23-188 226-365 (366)
199 PF03825 Nuc_H_symport: Nucleo 98.9 2.2E-07 4.7E-12 85.9 21.4 111 32-165 12-122 (400)
200 KOG2325 Predicted transporter/ 98.9 1.7E-08 3.8E-13 93.9 13.9 189 15-229 27-231 (488)
201 TIGR00885 fucP L-fucose:H+ sym 98.9 4.4E-08 9.6E-13 90.9 16.4 163 24-218 234-403 (410)
202 COG2211 MelB Na+/melibiose sym 98.9 7E-08 1.5E-12 89.7 16.9 162 22-204 236-398 (467)
203 PF03825 Nuc_H_symport: Nucleo 98.9 1.4E-07 3E-12 87.3 18.8 180 23-226 208-394 (400)
204 PRK11652 emrD multidrug resist 98.9 2.6E-07 5.7E-12 84.8 20.6 138 41-205 226-363 (394)
205 PF01306 LacY_symp: LacY proto 98.9 1E-07 2.2E-12 87.6 17.3 179 20-227 218-400 (412)
206 PF01306 LacY_symp: LacY proto 98.9 1.2E-08 2.5E-13 93.8 10.8 75 22-97 7-81 (412)
207 KOG0253 Synaptic vesicle trans 98.9 4.3E-08 9.3E-13 87.6 13.0 145 23-196 327-490 (528)
208 KOG0569 Permease of the major 98.8 2.8E-07 6E-12 86.4 17.9 161 22-205 269-433 (485)
209 PF06813 Nodulin-like: Nodulin 98.8 1.3E-06 2.8E-11 75.3 18.9 138 37-199 17-154 (250)
210 TIGR00924 yjdL_sub1_fam amino 98.8 2.8E-07 6E-12 87.2 15.5 183 28-229 278-470 (475)
211 PRK11462 putative transporter; 98.8 7.3E-07 1.6E-11 84.0 18.2 160 24-205 230-390 (460)
212 PRK15403 multidrug efflux syst 98.7 1.1E-06 2.5E-11 81.5 18.2 170 22-217 218-387 (413)
213 PF03137 OATP: Organic Anion T 98.7 2E-09 4.3E-14 102.9 -0.9 191 36-233 16-256 (539)
214 KOG2533 Permease of the major 98.6 4.2E-07 9.1E-12 85.9 13.0 166 22-214 273-443 (495)
215 KOG3626 Organic anion transpor 98.6 3.2E-07 7E-12 89.1 11.9 199 22-231 96-347 (735)
216 KOG2563 Permease of the major 98.6 2.9E-06 6.4E-11 77.8 17.2 189 43-255 65-267 (480)
217 PF03209 PUCC: PUCC protein; 98.6 3.3E-06 7.2E-11 76.8 17.2 169 30-223 216-394 (403)
218 PF03092 BT1: BT1 family; Int 98.6 2E-06 4.4E-11 80.4 16.3 162 44-228 11-176 (433)
219 KOG3764 Vesicular amine transp 98.6 1.2E-07 2.6E-12 85.4 7.6 180 23-225 271-452 (464)
220 COG0738 FucP Fucose permease [ 98.5 4.6E-06 9.9E-11 75.6 15.5 150 29-210 243-392 (422)
221 COG0477 ProP Permeases of the 98.5 8.8E-06 1.9E-10 69.9 16.8 146 43-216 23-174 (338)
222 KOG2816 Predicted transporter 98.5 3.6E-06 7.9E-11 79.0 14.3 168 29-228 25-200 (463)
223 PF03209 PUCC: PUCC protein; 98.5 9E-06 1.9E-10 74.1 16.2 141 50-204 7-153 (403)
224 PRK09584 tppB putative tripept 98.5 7.7E-06 1.7E-10 78.0 16.1 178 31-228 281-480 (500)
225 PF11700 ATG22: Vacuole efflux 98.4 2.6E-05 5.5E-10 73.8 19.3 173 60-253 72-276 (477)
226 PRK10207 dipeptide/tripeptide 98.4 4.8E-06 1E-10 79.1 14.4 146 34-199 281-438 (489)
227 TIGR00788 fbt folate/biopterin 98.4 8.8E-07 1.9E-11 83.7 8.4 148 50-216 280-432 (468)
228 PF12832 MFS_1_like: MFS_1 lik 98.4 5.4E-06 1.2E-10 58.2 9.4 67 30-98 8-74 (77)
229 TIGR01301 GPH_sucrose GPH fami 98.2 8E-05 1.7E-09 70.3 15.7 205 19-229 255-473 (477)
230 KOG0254 Predicted transporter 98.1 8.7E-05 1.9E-09 70.9 15.6 150 20-188 292-443 (513)
231 PF00083 Sugar_tr: Sugar (and 98.1 1E-08 2.3E-13 95.7 -11.6 184 23-229 253-438 (451)
232 KOG3762 Predicted transporter 98.0 3.2E-05 6.8E-10 72.5 9.1 170 28-227 377-547 (618)
233 PF06609 TRI12: Fungal trichot 98.0 0.00064 1.4E-08 65.7 17.9 152 19-197 307-462 (599)
234 PF05978 UNC-93: Ion channel r 98.0 0.00031 6.8E-09 56.2 13.2 110 57-196 36-145 (156)
235 TIGR00769 AAA ADP/ATP carrier 97.9 0.00099 2.1E-08 62.8 18.3 167 21-200 6-189 (472)
236 KOG0252 Inorganic phosphate tr 97.9 1.5E-05 3.3E-10 73.4 5.6 179 23-226 305-497 (538)
237 COG2270 Permeases of the major 97.9 0.00038 8.2E-09 63.8 14.3 128 42-195 35-170 (438)
238 KOG0637 Sucrose transporter an 97.9 2.7E-05 5.8E-10 71.7 6.7 167 22-199 32-202 (498)
239 TIGR00805 oat sodium-independe 97.9 0.00032 6.9E-09 68.9 14.0 83 22-105 330-415 (633)
240 PTZ00207 hypothetical protein; 97.9 0.00023 5E-09 68.8 12.7 174 22-226 353-551 (591)
241 KOG4686 Predicted sugar transp 97.9 8.7E-07 1.9E-11 76.8 -3.5 134 45-203 66-199 (459)
242 TIGR01272 gluP glucose/galacto 97.6 0.00015 3.2E-09 64.8 7.3 87 133-225 9-111 (310)
243 KOG2563 Permease of the major 97.6 0.00049 1.1E-08 63.5 9.6 157 52-232 295-455 (480)
244 PRK03612 spermidine synthase; 97.6 0.012 2.7E-07 56.4 19.4 156 29-209 21-179 (521)
245 KOG0255 Synaptic vesicle trans 97.5 0.0074 1.6E-07 57.7 17.4 121 51-200 346-466 (521)
246 PF01770 Folate_carrier: Reduc 97.5 0.0074 1.6E-07 55.7 15.9 155 42-226 23-181 (412)
247 PF06779 DUF1228: Protein of u 97.5 0.0023 5.1E-08 45.5 9.8 73 36-110 6-78 (85)
248 KOG2816 Predicted transporter 97.4 0.002 4.2E-08 60.8 12.1 128 44-200 263-390 (463)
249 PRK15462 dipeptide/tripeptide 97.4 0.0086 1.9E-07 56.9 16.5 120 60-199 310-437 (493)
250 KOG2615 Permease of the major 97.4 0.0029 6.3E-08 57.4 12.0 151 23-201 261-413 (451)
251 KOG4332 Predicted sugar transp 97.2 0.00038 8.2E-09 60.3 3.7 100 42-165 56-156 (454)
252 KOG3098 Uncharacterized conser 96.8 0.025 5.5E-07 53.0 12.9 104 64-197 56-159 (461)
253 KOG2325 Predicted transporter/ 96.8 0.0026 5.7E-08 59.8 6.2 201 18-225 258-473 (488)
254 COG3104 PTR2 Dipeptide/tripept 96.6 0.053 1.1E-06 51.0 13.3 147 61-226 327-486 (498)
255 PF06963 FPN1: Ferroportin1 (F 96.6 0.16 3.4E-06 47.6 16.5 136 41-197 277-413 (432)
256 KOG3574 Acetyl-CoA transporter 96.4 0.15 3.2E-06 46.7 13.9 162 17-199 26-192 (510)
257 KOG3626 Organic anion transpor 96.2 0.2 4.3E-06 49.6 15.3 81 23-103 393-475 (735)
258 KOG3762 Predicted transporter 96.1 0.014 3.1E-07 55.2 6.4 68 38-107 27-95 (618)
259 PF06963 FPN1: Ferroportin1 (F 96.0 0.8 1.7E-05 42.9 17.6 187 24-222 4-195 (432)
260 PF03137 OATP: Organic Anion T 95.7 0.0028 6E-08 61.0 0.0 174 24-203 307-515 (539)
261 KOG3098 Uncharacterized conser 95.4 0.99 2.1E-05 42.5 15.8 117 70-197 291-409 (461)
262 KOG1330 Sugar transporter/spin 94.7 0.44 9.6E-06 44.6 11.1 131 52-206 277-417 (493)
263 KOG3097 Predicted membrane pro 94.3 0.64 1.4E-05 41.7 10.6 148 18-196 25-181 (390)
264 PF02487 CLN3: CLN3 protein; 94.2 1.2 2.6E-05 41.2 12.7 127 68-228 69-196 (402)
265 COG3202 ATP/ADP translocase [E 94.0 5.7 0.00012 37.7 17.6 169 20-201 25-209 (509)
266 KOG1479 Nucleoside transporter 93.6 6 0.00013 36.7 17.3 127 23-166 19-148 (406)
267 PF03219 TLC: TLC ATP/ADP tran 93.3 3.6 7.8E-05 39.3 14.5 168 19-201 21-205 (491)
268 TIGR00769 AAA ADP/ATP carrier 92.9 8.9 0.00019 36.4 18.6 73 141-218 273-345 (472)
269 PF02487 CLN3: CLN3 protein; 92.2 3 6.4E-05 38.7 12.0 61 133-199 334-394 (402)
270 KOG4332 Predicted sugar transp 91.9 3.3 7.1E-05 36.5 11.1 139 61-221 285-425 (454)
271 PF03092 BT1: BT1 family; Int 91.4 0.51 1.1E-05 44.2 6.4 130 55-203 252-381 (433)
272 TIGR00926 2A1704 Peptide:H+ sy 91.4 5.6 0.00012 39.5 13.8 184 55-256 17-208 (654)
273 TIGR00806 rfc RFC reduced fola 87.8 11 0.00025 35.9 12.2 97 60-183 300-396 (511)
274 KOG0637 Sucrose transporter an 87.5 1.2 2.7E-05 41.7 5.5 88 19-107 276-380 (498)
275 PF03219 TLC: TLC ATP/ADP tran 87.2 29 0.00062 33.2 17.2 73 141-218 289-361 (491)
276 TIGR00880 2_A_01_02 Multidrug 82.7 17 0.00036 26.7 10.7 44 59-103 88-131 (141)
277 TIGR00939 2a57 Equilibrative N 80.5 9.3 0.0002 35.9 8.3 57 133-195 371-427 (437)
278 PF01770 Folate_carrier: Reduc 77.5 49 0.0011 30.9 11.9 96 59-181 286-381 (412)
279 KOG4830 Predicted sugar transp 77.3 3.6 7.7E-05 36.0 4.0 62 29-92 24-94 (412)
280 TIGR00939 2a57 Equilibrative N 75.4 73 0.0016 30.0 17.9 33 133-166 105-137 (437)
281 COG5336 Uncharacterized protei 74.4 16 0.00034 27.1 6.1 30 67-96 51-80 (116)
282 PRK10263 DNA translocase FtsK; 72.8 16 0.00035 38.9 8.0 34 187-220 142-175 (1355)
283 PF11947 DUF3464: Protein of u 72.2 30 0.00065 27.5 7.8 31 156-192 116-146 (153)
284 KOG1479 Nucleoside transporter 71.6 27 0.00058 32.5 8.5 114 37-166 258-375 (406)
285 TIGR01666 YCCS hypothetical me 64.2 66 0.0014 32.3 10.2 52 78-150 43-97 (704)
286 TIGR01667 YCCS_YHJK integral m 62.6 1.3E+02 0.0028 30.3 11.9 34 77-110 42-78 (701)
287 PF13000 Acatn: Acetyl-coenzym 61.6 78 0.0017 30.5 9.5 27 173-199 151-177 (544)
288 PF09527 ATPase_gene1: Putativ 58.9 44 0.00096 21.2 6.8 28 67-94 9-36 (55)
289 KOG3810 Micronutrient transpor 56.4 1.7E+02 0.0036 27.1 11.5 96 61-183 274-369 (433)
290 KOG1237 H+/oligopeptide sympor 54.3 32 0.00069 33.6 6.0 65 130-200 454-518 (571)
291 PF06912 DUF1275: Protein of u 50.2 1.5E+02 0.0031 24.5 13.7 16 66-81 54-69 (209)
292 PF09930 DUF2162: Predicted tr 44.5 2E+02 0.0043 24.5 9.1 65 48-116 121-185 (224)
293 TIGR02230 ATPase_gene1 F0F1-AT 42.6 1E+02 0.0022 22.6 5.7 22 72-93 56-77 (100)
294 COG3086 RseC Positive regulato 39.2 1.6E+02 0.0034 23.2 6.5 39 53-92 67-105 (150)
295 PF01733 Nucleoside_tran: Nucl 39.1 11 0.00024 33.4 0.3 55 134-194 248-302 (309)
296 PF03596 Cad: Cadmium resistan 36.7 77 0.0017 26.2 4.8 32 43-78 115-146 (191)
297 PF00854 PTR2: POT family; In 35.0 2.9E+02 0.0062 24.9 8.9 75 33-108 42-121 (372)
298 KOG3574 Acetyl-CoA transporter 34.5 3.2E+02 0.007 25.7 8.7 55 145-205 380-434 (510)
299 PF07672 MFS_Mycoplasma: Mycop 34.4 35 0.00077 29.7 2.6 83 172-254 2-94 (267)
300 PF02694 UPF0060: Uncharacteri 33.3 60 0.0013 24.1 3.2 49 58-107 54-102 (107)
301 PRK02237 hypothetical protein; 33.0 94 0.002 23.1 4.2 49 58-107 56-104 (109)
302 COG4827 Predicted transporter 31.7 3.1E+02 0.0068 23.0 9.1 94 49-147 128-227 (239)
303 PF11151 DUF2929: Protein of u 31.6 1.5E+02 0.0032 19.2 5.7 41 180-220 6-46 (57)
304 TIGR02230 ATPase_gene1 F0F1-AT 30.6 2.2E+02 0.0047 20.9 6.0 26 179-204 46-71 (100)
305 PF06779 DUF1228: Protein of u 30.3 1.7E+02 0.0036 20.7 5.1 58 145-211 5-62 (85)
306 PRK11469 hypothetical protein; 29.6 3.2E+02 0.0069 22.4 10.1 52 54-106 130-182 (188)
307 COG3202 ATP/ADP translocase [E 28.1 5.5E+02 0.012 24.7 17.1 81 139-224 289-370 (509)
308 PF13000 Acatn: Acetyl-coenzym 25.2 6.4E+02 0.014 24.5 12.2 55 141-201 412-466 (544)
309 KOG3880 Predicted small molecu 24.3 1.4E+02 0.0031 27.1 4.6 178 25-239 15-212 (409)
310 COG2119 Predicted membrane pro 24.1 4.1E+02 0.0089 21.9 8.1 38 65-103 141-178 (190)
311 PF01528 Herpes_glycop: Herpes 23.7 1.5E+02 0.0033 27.2 4.9 14 151-164 251-264 (374)
312 COG4262 Predicted spermidine s 22.7 6.3E+02 0.014 23.5 13.3 98 42-161 30-132 (508)
313 COG1268 BioY Uncharacterized c 22.6 3.4E+02 0.0075 22.3 6.3 21 65-85 89-109 (184)
314 PF06813 Nodulin-like: Nodulin 21.9 4.5E+02 0.0098 22.6 7.3 38 182-220 43-80 (250)
315 PF02659 DUF204: Domain of unk 21.8 2.4E+02 0.0053 18.4 6.0 30 70-100 36-65 (67)
316 PHA03242 envelope glycoprotein 21.3 3.2E+02 0.007 25.7 6.5 12 153-164 267-278 (428)
No 1
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.93 E-value=1.8e-25 Score=204.28 Aligned_cols=193 Identities=27% Similarity=0.473 Sum_probs=177.7
Q ss_pred cccCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcC----CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHH
Q 023063 16 RQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLH----MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT 91 (288)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~ 91 (288)
...+++|.++.++.++++|+++||+....+..|++.+++ ++++++..+.+.+....++.+.++||++||++|+|++
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 345688999999999999999999999999999999888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhh
Q 023063 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (288)
Q Consensus 92 i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 171 (288)
+.+|.+++.+|.+.++.+. ......++++++++++|.|.+++++.++++|++|++|+
T Consensus 95 I~lGail~~iGh~~L~~~~--------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp--- 151 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS--------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP--- 151 (498)
T ss_pred HHHHHHHHHHHHHHHhccc--------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc---
Confidence 9999999999999998652 01456788999999999999999999999999999987
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccceee
Q 023063 172 TKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (288)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (288)
||.+.++.+|++.|+|++++|.+.+++.+++||...|...++...++++.+++++++...
T Consensus 152 -rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 152 -RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred -ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 699999999999999999999999999999999999999999999999999998876543
No 2
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=3.6e-23 Score=195.49 Aligned_cols=189 Identities=17% Similarity=0.304 Sum_probs=165.4
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
++++|.++.+++.+++|++++|+...+++.|+++++|++..+++++.+.+.....+..+++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999994499999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
++.++++++.++.. ....++++++++++|.|...++..++++|++|++++ +|++.
T Consensus 90 ~~~~g~~~~~~~~~---------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~~ 144 (489)
T PRK10207 90 VLAIGYFMTGMSLL---------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDGA 144 (489)
T ss_pred HHHHHHHHHHHhcc---------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhcc
Confidence 99999998887541 123456788999999999999999999999988753 46788
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcccee
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (288)
+++++++.|+|..++|.+++++.++.||++.|++..+..+++++.+...++.++
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVK 198 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence 999999999999999999999999999999999987766666666666554443
No 3
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=99.91 E-value=1.1e-22 Score=193.56 Aligned_cols=248 Identities=51% Similarity=0.885 Sum_probs=227.9
Q ss_pred ccCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHH
Q 023063 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (288)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~ 96 (288)
..+.|+....++..+.+++.++|++..++..|+++.++.+...+...++.+.......++++++++|.++||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC---CCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhh
Q 023063 97 IIYQIGMICLTISAILPQLRPPPC---EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (288)
Q Consensus 97 ~l~~i~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
+++.+|..++.+...+|.+....| ...+.|..++......++.++.+.++|.|+..+++.++.+||+++.++.+++.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999988999988887 23457888888888999999999999999999999999999999776666667
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccceeecCCCCChhhHHHHHHHHHHHh
Q 023063 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRK 253 (288)
Q Consensus 174 ~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (288)
....++|+++..++|..++..+..+++++.||.+.|.++.+...++++++....+.++.+++.++|...+.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred CccccCCCCcc
Q 023063 254 RKLTMVTDPKL 264 (288)
Q Consensus 254 ~~~~~~~~~~~ 264 (288)
|+.+.+.++++
T Consensus 272 ~~~~~~~~~~~ 282 (571)
T KOG1237|consen 272 RKAVVSLDPEE 282 (571)
T ss_pred HhccCCCcchh
Confidence 88766655433
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.89 E-value=9.5e-22 Score=185.38 Aligned_cols=189 Identities=19% Similarity=0.310 Sum_probs=165.2
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHh--cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHH
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~ 95 (288)
.++++.++.+++.++++++++|++.++++.|++++ +|++..+++.+.+.+.+...++.+++|+++||++|||+++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 34667888999999999999999999999999887 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 023063 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (288)
Q Consensus 96 ~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
.+++.++.+++.++. +.+.+++++++.++|.|...++..++++|++|+++++ +|+
T Consensus 86 ~~~~~~g~~~~~~~~----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~ 140 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRD 140 (475)
T ss_pred HHHHHHHHHHHHhcc----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---ccc
Confidence 999999998887654 4566778888999999999999999999999876421 588
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcccee
Q 023063 176 KYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (288)
Q Consensus 176 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (288)
+++++++++.++|..++|.+++++.+++||+..|.+.++..+++.+.+...++.++
T Consensus 141 ~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~ 196 (475)
T TIGR00924 141 GGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLR 196 (475)
T ss_pred ceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 89999999999999999999999999899999999888766666666666555443
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=2.3e-21 Score=181.93 Aligned_cols=186 Identities=23% Similarity=0.416 Sum_probs=159.5
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+++.++.+++.++++++++|++..+++.|+++.+|+++.+++.+.+.+.....++++++|+++||++||||++.++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999879999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+++.... .....++++..+..+|.|...++..++++|++|++++ +|.+.++
T Consensus 87 ~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~ 141 (493)
T PRK15462 87 AIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFS 141 (493)
T ss_pred HHHHHHHHHhh---------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceeh
Confidence 99887665322 0122344555566788888889899999999998643 6899999
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccce
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLY 230 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 230 (288)
++|...++|+.++|.+.+++.+.+||+..|.+.++..+++++.+...++.+
T Consensus 142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l 192 (493)
T PRK15462 142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999988777777777766655544
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.87 E-value=1.1e-20 Score=179.17 Aligned_cols=186 Identities=19% Similarity=0.357 Sum_probs=157.5
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
.++++.++.+++.++++++++|++..+++.|+++++|++..+++...+.+........+++|+++||++|||++++++.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 35667899999999999999999999999999999999999998888887777777778999999994499999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..++.+++.++. ...+.++++++++++|.|...++..++++|++|++++ ++++.
T Consensus 97 ~~~ig~~l~~~~~---------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~ 151 (500)
T PRK09584 97 VLAIGYALVAWSG---------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGA 151 (500)
T ss_pred HHHHHHHHHHHhc---------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhc
Confidence 9999988777643 1345566778889999999999999999999987642 46678
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+++++++.++|+.++|.+++++.+++||+..|.+.++...++++.+....+
T Consensus 152 ~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~ 202 (500)
T PRK09584 152 FTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQR 202 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 899999999999999999999999999999999887766666655555443
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.84 E-value=2.7e-19 Score=173.20 Aligned_cols=204 Identities=31% Similarity=0.601 Sum_probs=174.0
Q ss_pred HhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 023063 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (288)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~ 115 (288)
++||++...+..|+++.+|++.+.+..+...+.....+.+.++|+++|+++||++++.++.+++.+|.+++++.. .|..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 468999999999999999999999999999999999999999999999999999999999999999998888755 2211
Q ss_pred CCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 023063 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (288)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 195 (288)
. ........++++.+.++|.|++.++..++.+|++++++ ++++.++++++++++|+|+++++++
T Consensus 80 ~-------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 80 G-------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred c-------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 01133456788889999999999999999999998653 2268899999999999999999999
Q ss_pred Hhheeecc-------chhhhhhHhHHHHHHHHHHHHHhccceeecCCCCChhhHHHHHHHHHHHhCcc
Q 023063 196 LVYIQDNI-------GWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKRKL 256 (288)
Q Consensus 196 ~~~l~~~~-------g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (288)
.+++.+.+ +|..+|.+++++.+++++++...++++++.++.+++..+..+++..++++|..
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~ 211 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFS 211 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhc
Confidence 99887443 69999999999999999999888888877778888888888888887776543
No 8
>PRK10054 putative transporter; Provisional
Probab=99.79 E-value=1e-17 Score=154.49 Aligned_cols=175 Identities=13% Similarity=0.137 Sum_probs=148.1
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
+|..+.++...++...+++...++++.|+++++|++..+++++.+.+.+...++.++.|+++||+ |||++++++.++..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHH
Confidence 45677777888889999999999999999999999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.++..+.. +.+.+++.+.+.+.+.+...+...++.+|.++++ +|++.+++
T Consensus 85 ~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~ 136 (395)
T PRK10054 85 SGFIAIPLVN----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST------SKTKIFSL 136 (395)
T ss_pred HHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh------HHHHHHHH
Confidence 8887776655 5566666677777777777778888899999876 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+...++|..++|.+++++.+ .+|+..|.+.+++.++..+....
T Consensus 137 ~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 137 NYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998764 68999998877766665544333
No 9
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.78 E-value=2.8e-17 Score=151.45 Aligned_cols=175 Identities=11% Similarity=0.127 Sum_probs=147.5
Q ss_pred cccCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHH
Q 023063 16 RQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (288)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~ 95 (288)
..+..|+.+..+....++.....|.....+|.+ .+++|+++.+.++..+...++..++.++.|+++||+ |||+.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~ 91 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILF 91 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHH
Confidence 334466666666656555555655555556554 568999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 023063 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (288)
Q Consensus 96 ~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
.++..++.+++.... +.+.+++.|++.|++.+...+...+++.|.+|++ +|+
T Consensus 92 ~~~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~~~ 143 (394)
T PRK10213 92 AVLLTLSCLLVSFAN----------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR------TVP 143 (394)
T ss_pred HHHHHHHHHHHHHHC----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh------HHH
Confidence 999999888877655 7888999999999999999999999999999887 699
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 176 KYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 176 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
++.+....+.++|..++|.+++++.+.+||+..|++.+++.++..
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998999999988766554443
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.77 E-value=2.5e-17 Score=151.31 Aligned_cols=175 Identities=9% Similarity=0.044 Sum_probs=143.7
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
|..++.+.+..+......+.....+ ..+.+++|.++.+.++..+.+.++..++.++.|+++||+ |||+.+..+..++.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 4345555555555444444333334 456678999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.+..+. +++.+.+.|++.|++.+...+...+++.|.+|++ +|++.+++
T Consensus 86 ~~~~~~~~~~----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g~ 137 (390)
T PRK03545 86 ASHVLSALAW----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALSL 137 (390)
T ss_pred HHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHHH
Confidence 9988888766 6788889999999999888888889999999987 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
+..+.++|..++|.+++.+.+.+||++.|++.+++.++..+....
T Consensus 138 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 138 LATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888899999998887766555444333
No 11
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1.4e-18 Score=157.54 Aligned_cols=204 Identities=13% Similarity=0.163 Sum_probs=166.5
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
++.+..+..+..++++--|.+-. ...=.++.+|.+++..+++.+++.+...++.|++|+++||| .|++++.+|..+..
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWT 109 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHH
Confidence 34455555667777777666654 33345667999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
+++++..++. .+|++.+.|.+.|+|.+...+..+++++|.||.. +|++.+++
T Consensus 110 ~Av~~~~fs~----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~------~Rs~~~~i 161 (493)
T KOG1330|consen 110 LAVFASGFSN----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD------KRSRVLGI 161 (493)
T ss_pred HHHHHHHHHH----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcch------hhhHHHHH
Confidence 9999999887 8899999999999999999999999999999998 79999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHhccc-eeec--CCC-----CChhhHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGYPL-YRNL--DPA-----GSPFTRLLQVCVAAF 251 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~~~~-~~~~--~~~-----~~~~~~~~~~~~~~~ 251 (288)
+|++.++|+.+|.+++..+....+ ||++|.+.+++.++..++..+..++ .++. +.+ ..+.++..|.++...
T Consensus 162 fy~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~ 241 (493)
T KOG1330|consen 162 FYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLA 241 (493)
T ss_pred hhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHH
Confidence 999999999999999999988877 9999999988887766655444432 2211 111 134666667766666
Q ss_pred HhC
Q 023063 252 RKR 254 (288)
Q Consensus 252 ~~~ 254 (288)
|++
T Consensus 242 ~~~ 244 (493)
T KOG1330|consen 242 KIK 244 (493)
T ss_pred ccC
Confidence 644
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.77 E-value=5.2e-17 Score=147.02 Aligned_cols=183 Identities=12% Similarity=0.100 Sum_probs=165.8
Q ss_pred cccCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHH
Q 023063 16 RQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (288)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~ 95 (288)
+++..|..++.+.+..|.....=+.....+| -+.+++|.+..++|+.++.|..+..++.|+-..+.||+ .||+.++..
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~ 84 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGL 84 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHH
Confidence 3455677888888888888777776666554 55678999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 023063 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (288)
Q Consensus 96 ~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
+.+++++.++.+++. +++.+.++|++.|+..|.+++...++.++..|++ +|+
T Consensus 85 l~lFi~~n~l~alAp----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~------~~~ 136 (394)
T COG2814 85 LALFIVSNLLSALAP----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPG------KRG 136 (394)
T ss_pred HHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------chh
Confidence 999999999999988 8999999999999999999999999999999998 799
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 176 KYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 176 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
++.+....+..++..+|..++.++.+.+|||..|+..+++.++.++..+...|
T Consensus 137 ~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 137 RALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999988888877777666
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.77 E-value=4.5e-17 Score=150.96 Aligned_cols=179 Identities=13% Similarity=0.115 Sum_probs=145.9
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+|+..+.+.+..++.......+ .+....+++++|++..+.+++.+.+.++..+++++.|+++||+ |||+++..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 4555555555445444444444 3344588899999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+++.++. +.+.+++.|++.|++.+...+....++.|.+|++ +|++..+
T Consensus 84 ~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~rg~~~~ 135 (412)
T TIGR02332 84 GIASTATMFAT----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAY------FRARANA 135 (412)
T ss_pred HHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHH------HHHHHHH
Confidence 99999888766 6778889999999999999888888999999987 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheee------ccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 180 WYYFVMGAAILVAVTVLVYIQD------NIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~------~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+++.+..+|..+++.+++++.+ ..|||+.|.+.++..++..+..++..+
T Consensus 136 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 136 LFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999887653 469999999877766555444444433
No 14
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.76 E-value=2.8e-17 Score=147.46 Aligned_cols=168 Identities=17% Similarity=0.312 Sum_probs=142.7
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~ 108 (288)
+..++..+........++.++.+++|.+..+.+++.+.+.+...++.++.|+++||+ |||+++..+.++..++.+...+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 445555666666666666688889999999999999999999999999999999998 9999999999999998555554
Q ss_pred HhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 023063 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (288)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (288)
+. +.+.+++.+++.|++.+...+...+++.|.+|++ +|++.++..+.+.++|
T Consensus 82 ~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g 133 (352)
T PF07690_consen 82 AS----------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSLG 133 (352)
T ss_dssp HC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHHH
T ss_pred hh----------------------hHHHHhhhccccccccccccccccccccccchhh------hhhhccccccchhhhh
Confidence 33 4558889999999999999999999999999997 6999999999999999
Q ss_pred HHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 189 ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 189 ~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
..++|.+++++.+..+|+..|++.+++.++..+....
T Consensus 134 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 134 SILGPLLGGFLISYFGWRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp HHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHC
T ss_pred hhcccchhhhhhhccccccccccccchhhhhhhhHhh
Confidence 9999999999998899999999988888777664333
No 15
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.76 E-value=6.6e-17 Score=149.91 Aligned_cols=151 Identities=11% Similarity=0.154 Sum_probs=130.2
Q ss_pred hHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccc
Q 023063 49 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQE 128 (288)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~ 128 (288)
+.+++|.+..+.++..+++.++..++++++|+++||+ |||++++.+..+..++.+.+..+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 5678999999999999999999999999999999998 999999999999999888887765
Q ss_pred cccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhh
Q 023063 129 ANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWG 208 (288)
Q Consensus 129 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~ 208 (288)
+.+.++++|+++|++.+...+...+++.|.++++ ++++.+++.+.+.++|..++|.+++.+.+..||++.
T Consensus 103 ----~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~ 172 (413)
T PRK15403 103 ----SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQT------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVL 172 (413)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 6788899999999998876666678889999887 688999999999999999999999988888899999
Q ss_pred hhHhHHHHHHHHHHHHHhcc
Q 023063 209 LGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 209 f~~~~~~~~~~~i~~~~~~~ 228 (288)
|++.++..+++.+..+...+
T Consensus 173 f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 173 FAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 98887766666554443333
No 16
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.76 E-value=1e-16 Score=145.95 Aligned_cols=177 Identities=17% Similarity=0.151 Sum_probs=144.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++.+....+....+.....+.+| ++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+.+..+.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHH
Confidence 3444444444445555555555555 45678999999999999999999999999999999998 999999999999888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+++.... +.+.+.+.+++.|++.+...+...+++.|.+|++ +|++.++..
T Consensus 83 ~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 134 (385)
T TIGR00710 83 SSLGLALSN----------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGE------ELSRIYSIL 134 (385)
T ss_pred HHHHHHHHc----------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH------HHHHHHHHH
Confidence 888877655 6777888899999999999999999999999977 699999999
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+....+|..+++.+++++.+..+|+..|++.++..++..+......+
T Consensus 135 ~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 135 MPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999888889999998877766655554444333
No 17
>PRK12382 putative transporter; Provisional
Probab=99.75 E-value=1.1e-16 Score=146.94 Aligned_cols=172 Identities=15% Similarity=0.103 Sum_probs=137.9
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++.+.+..++...+.....+.+|.|+.+++|.+..+.+++.+.+.+...+++++.|+++||+ ||||.++.+.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 3455555566666666666778888899999999999999999999999999999999999998 999999999887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+........+.. ...+.+.+++.+++.|++.+...+...+++.|.+|++ +|+++++++
T Consensus 94 ~~~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~~ 153 (392)
T PRK12382 94 AGLAYLLAAILPVS--------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSWN 153 (392)
T ss_pred HHHHHHhhhccccc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhHH
Confidence 65544332211110 0125677889999999999988888888899999877 699999999
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHH
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTF 214 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~ 214 (288)
..+.++|..++|.+++++.+.+||+..+.+..+
T Consensus 154 ~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 186 (392)
T PRK12382 154 GMAMYGALAAGAPLGLLLHSHFGFAALALTTMV 186 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence 999999999999999988888899876655443
No 18
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.75 E-value=7.9e-17 Score=147.22 Aligned_cols=156 Identities=15% Similarity=0.074 Sum_probs=122.8
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~ 122 (288)
......+++++|+++.+.+++.+.+.+++.++.++.|+++||+ |||+++..+......+.+ .....
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------ 76 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------ 76 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh------------
Confidence 3344556678999999999999999999999999999999998 999887655544444332 22221
Q ss_pred cccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec
Q 023063 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 202 (288)
.+...+.+.|++.|+|.+. .....+..+|.+|++ +|+++.++.+.+..+|..+++.+++++.+.
T Consensus 77 ---------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~------~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~ 140 (368)
T TIGR00903 77 ---------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREE------RRDLVISLLSFAMYLGIIFALAAGLKIYTA 140 (368)
T ss_pred ---------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1577899999999999986 445556669999976 799999999999999999999999999888
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 203 IGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+|||..|.+.+++.++..+..+...+
T Consensus 141 ~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 141 GGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999998877766555554444434
No 19
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.75 E-value=1.4e-16 Score=147.05 Aligned_cols=171 Identities=13% Similarity=0.116 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 023063 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (288)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~ 104 (288)
+.++...++...+++.+.+.++.|+++++|++..+.+++.+...+...+..+++|+++||+ |||+++..+..+..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 4566788888899999999999999999999999999999999999999999999999998 999999999999999888
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
.+.... +.+.+++.+++.|++.+...+...+++.|.+|++ +|+++.++.+..
T Consensus 92 ~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~ 143 (400)
T PRK11646 92 TMAIAH----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH------QRGRFFSLLMMQ 143 (400)
T ss_pred HHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHH
Confidence 877654 5677888899999998888888889999999876 699999999999
Q ss_pred HHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 185 ~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.++|..++|.+++++. ..||+..|++.++..++..+....
T Consensus 144 ~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 144 DSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888 679999998877665555444333
No 20
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.75 E-value=1.3e-16 Score=143.72 Aligned_cols=174 Identities=14% Similarity=0.070 Sum_probs=142.3
Q ss_pred HHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 023063 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (288)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~ 107 (288)
+...++..++.......+|.|.. +++.+..+.+++.+...+...++.++.|+++||+ |||++++.+.++..++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHH
Confidence 34555555655556666777776 5799999999999999999999999999999998 999999999888888777766
Q ss_pred HHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHH
Q 023063 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (288)
Q Consensus 108 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (288)
.....+ ..+.+.+++.+++.|++.+...+...++++|.+|++ +|++..++.+.+.++
T Consensus 83 ~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 139 (365)
T TIGR00900 83 FVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRSL 139 (365)
T ss_pred HHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHHH
Confidence 544111 125677888899999999999999999999999987 799999999999999
Q ss_pred HHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 188 AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 188 g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
|..++|.+++++.+..||+..|++.++..++..+.....
T Consensus 140 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 140 FYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999888899999988776655554444433
No 21
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.74 E-value=2.3e-16 Score=145.59 Aligned_cols=160 Identities=13% Similarity=0.096 Sum_probs=131.9
Q ss_pred hHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 023063 37 AVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (288)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~ 116 (288)
....+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.++++..+..++.++.....
T Consensus 28 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------ 99 (406)
T PRK15402 28 ANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ------ 99 (406)
T ss_pred hhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc------
Confidence 33444444444 4578999999999999999999999999999999998 999999999988888888777655
Q ss_pred CCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhH
Q 023063 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (288)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 196 (288)
+.+.+++.+++.|++.+...+...+++.|.+|++ +|.+..+..+....+|..++|.++
T Consensus 100 ----------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~ 157 (406)
T PRK15402 100 ----------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA------DAIKITALMANVALLAPLLGPLVG 157 (406)
T ss_pred ----------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888899999999888888889999999887 577888888888888999999999
Q ss_pred hheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 197 VYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 197 ~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+++.++.+|+..|++.++..++..+.....
T Consensus 158 ~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 158 AALIHVLPWRGMFVLFAALAALSFFGLWRA 187 (406)
T ss_pred HHHHHccCccHHHHHHHHHHHHHHHHHHHh
Confidence 988888899999988777666655544333
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.74 E-value=2.1e-16 Score=144.61 Aligned_cols=172 Identities=12% Similarity=0.165 Sum_probs=144.7
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
+.+|+.+..+.+..+...+..+......+ .+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 45666666667777777777766655454 56778999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..++.+++.+.. +++.+++.+++.|++.+...+...+++.|.+|++ +|++.
T Consensus 86 ~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~ 137 (405)
T TIGR00891 86 LFSAGTLACGFAP----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH------LRNKA 137 (405)
T ss_pred HHHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh------hhhHH
Confidence 8888888877655 6777888999999999999999999999999987 69999
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccc--hhhhhhHhHHHHHHH
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIG--WGWGLGIPTFAMFLS 219 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g--~~~~f~~~~~~~~~~ 219 (288)
.++.+.+..+|..+++.+.+.+.+..+ |+..|.+.++..++.
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 999999999999999999888777665 998887655444333
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.74 E-value=2e-16 Score=149.94 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=144.9
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
..+..+.+..++...-...+...+|.. .+++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+..++.+
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 344444455555555544454555555 568999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+.+..+. +.+.++++|+++|+|.+...+.....+.+.+++++ +|+++++++
T Consensus 84 ~~~~~~~a~----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~~ 136 (495)
T PRK14995 84 ASLAAAFSP----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGVW 136 (495)
T ss_pred HHHHHHHcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHHH
Confidence 999988766 78889999999999999888877777777775432 799999999
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
....++|..++|.+++++.++.|||+.|++...+.++.++......+
T Consensus 137 ~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 137 AAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999998877666555554444444
No 24
>PRK10504 putative transporter; Provisional
Probab=99.74 E-value=3.3e-16 Score=147.24 Aligned_cols=178 Identities=13% Similarity=0.110 Sum_probs=150.3
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
.+.++.+.+..++..+..+.+...+|.|.+ ++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 345677777778888888888888888775 6999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.+.+.. +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..+.
T Consensus 87 ~~~~~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 138 (471)
T PRK10504 87 LGSLFCALSG----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTF 138 (471)
T ss_pred HHHHHHHHhC----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHH
Confidence 8887766544 5677888899999999999999999999999876 68999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
.+...++|..++|.+++++.+..||++.|.+......+..+......+
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999899999998877666555554444433
No 25
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.74 E-value=2.7e-16 Score=144.61 Aligned_cols=176 Identities=12% Similarity=0.028 Sum_probs=145.1
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
.++.+..+.+..+...++.....+.++.|+++++|.++.+.+++.+.+.+...+++++.|+++||+ ||||+++.+.+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 445666677777778888777888899999999999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+.+.+.....+. ...+...+++.|++.|++.+...+...+++.|.+|++ +|++..+
T Consensus 92 ~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~ 151 (399)
T PRK05122 92 ALSGLLYLLAGLLAAW--------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL------HTGRVIS 151 (399)
T ss_pred HHHHHHHHHhhhhhcc--------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh------hhccchh
Confidence 8877666544311000 0114567788899999999999998889999999887 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHH
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~ 216 (288)
+...+.++|..+++.+++++.+..||+..+++..++.
T Consensus 152 ~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~ 188 (399)
T PRK05122 152 WNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLA 188 (399)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 9989999999999999999888889998776655543
No 26
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.73 E-value=3.2e-16 Score=143.96 Aligned_cols=173 Identities=12% Similarity=0.095 Sum_probs=140.2
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
++|..+......++..+......+.+|.+ .+++|.++.+.+++.+.+.+...++.++.|+++||+ |||+.+..+..+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 45666656666666665555554555544 567999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.++..... +.+.+++.+++.|++.+...+....+..|.++++ ++++..+
T Consensus 84 ~~~~~~~~~~~----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 135 (394)
T PRK11652 84 ILGTLVALFAH----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT------QLRHANS 135 (394)
T ss_pred HHHHHHHHHHc----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH------HHHHHHH
Confidence 88888776654 5677888899999998877777778888888766 6888889
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHH
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~ 222 (288)
.++.+..++..++|.+++.+.+..||+..|++.++..++..+.
T Consensus 136 ~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 136 LLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888889999998876655544433
No 27
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.72 E-value=4.1e-16 Score=143.61 Aligned_cols=175 Identities=14% Similarity=0.141 Sum_probs=143.1
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHH
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l 98 (288)
.+|..+.......++..+..+......| .+.+++|+++.+.+++.+...++..++.++.|+++||+ |||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 3444555555566666666655544444 45567999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
..++.+++.+.. +.+.+.+.+++.|++.+...+...+++.|.+|++ +|++..
T Consensus 90 ~~~~~~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 141 (406)
T PRK11551 90 FGLFSLATAQAW----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR------LRGTAV 141 (406)
T ss_pred HHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH------HHHHHH
Confidence 888877766654 6777888999999999998999999999999877 699999
Q ss_pred HHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHH
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
++++.+.++|..+++.+++.+.+..+|+..|++.+++.++..+..
T Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK11551 142 SLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLL 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888888899998888766554444433
No 28
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.71 E-value=5.3e-16 Score=142.20 Aligned_cols=177 Identities=12% Similarity=0.122 Sum_probs=147.2
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++.+.+..++.....+...+.+|. +.+++|++..+.+++.+...++..++.++.|+++||+ |||+++..+..+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 34555666666666666666666655 5678999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+++..+. +++.+++.+++.|++.+...+...+++.|.++++ +|++.++.+
T Consensus 81 ~~~l~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 132 (382)
T PRK10091 81 GNAMFTLSS----------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGM 132 (382)
T ss_pred HHHHHHHhC----------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHH
Confidence 998887766 6788899999999999988888888889998876 688899999
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
..+..+|..++|.+++++.+..||++.|.+.++..++..+......+
T Consensus 133 ~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 133 VSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999988889999999887766555444333333
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.71 E-value=1.1e-15 Score=141.59 Aligned_cols=165 Identities=13% Similarity=0.164 Sum_probs=140.0
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+++......+..+...+..+.. .+...++++++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 3444554555555555555544 4455567788999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+...++. +.+.+++.+++.|++.+...+...+++.|.+|++ +|+++.+
T Consensus 94 ~~~~~~~~~~~----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~~~ 145 (426)
T PRK12307 94 SVGTGLSGLAS----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKASA 145 (426)
T ss_pred HHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHhhh
Confidence 99998888766 6788899999999999999999999999999987 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHH
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTF 214 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~ 214 (288)
++..+..+|..+++.+.+.+.+.+||+..|++...
T Consensus 146 ~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 146 FLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 99999999999999999988888999999887543
No 30
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.71 E-value=6.2e-16 Score=144.24 Aligned_cols=165 Identities=16% Similarity=0.142 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~ 106 (288)
.++..++..+..+.+...++.+. +++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHH
Confidence 33444444444444455565555 56999999999999999999999999999999998 99999999999999998888
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
.... +++.+++.+++.|++.|...+...+++.|++|++ +|++.+++++.+.+
T Consensus 106 ~~~~----------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~ 157 (434)
T PRK11663 106 GFSS----------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT------ERGGWWAIWNTAHN 157 (434)
T ss_pred HHHh----------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH------HHHHHHHHHHHHHH
Confidence 7765 6777788888889999988888999999999987 69999999999999
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHH
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i 221 (288)
+|+.+++.+.+++.+.+||++.|++.++..++..+
T Consensus 158 ~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 158 VGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 99999999999998889999999887765544433
No 31
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.71 E-value=1.5e-15 Score=143.92 Aligned_cols=179 Identities=11% Similarity=0.072 Sum_probs=126.6
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
++.+.......++....+|++..++|.|+++.+|++..+..+......++..++.+++|+++||+ |||+.+..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 34444344445566788899999999999888999988888877788888889999999999998 99999888876544
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.+.... ...+...+++++++.+++.+...+...++..|.+|++ .|++..++
T Consensus 328 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~------~Rg~~~g~ 382 (490)
T PRK10642 328 VLAIPAFILI-------------------NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH------IRYSALAA 382 (490)
T ss_pred HHHHHHHHHH-------------------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc------cchHHHHH
Confidence 4443322211 0113455666777777777666677788889999998 69998987
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+....+++.++|.+.+++.+..+ |+..+++..+..++.++..++
T Consensus 383 ~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 383 AFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 555456667889999888876554 565555444444444444333
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=99.71 E-value=1.6e-15 Score=138.10 Aligned_cols=175 Identities=12% Similarity=0.113 Sum_probs=139.7
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
++.+.......+......+.. .....++.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+..+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHH
Confidence 344444444444444444433 3444556678999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+++.... +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..++
T Consensus 94 ~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~ 145 (398)
T TIGR00895 94 VFTLLCALAT----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR------FRGTAVGL 145 (398)
T ss_pred HHHHHHHHcc----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHH------hhchhHhh
Confidence 8877776654 5677888899999999999999999999999876 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+.+..+|..+++.+.+++.+..||+..|++.+++..+..+....
T Consensus 146 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 146 MFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMR 190 (398)
T ss_pred HhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHH
Confidence 999999999999999999988899999888875544444443333
No 33
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.71 E-value=7e-16 Score=145.12 Aligned_cols=175 Identities=12% Similarity=0.208 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
+..+.+..++..+........+| ++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.++++.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 33444445555454444444444 55578999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
+++..+. +.+.+.+.+++.|++.+...+...+++.|.+|++ +|+++.++++.
T Consensus 82 ~~~~~~~----------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~ 133 (485)
T TIGR00711 82 LLCGVAP----------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE------KRGRAMAIWGL 133 (485)
T ss_pred HHHhCcC----------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH------HHHHHHHHHHH
Confidence 8877655 6778889999999999999999999999999977 69999999999
Q ss_pred HHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 184 ~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
...+|..++|.+++++.++.||++.|++...+.++..+......+
T Consensus 134 ~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 178 (485)
T TIGR00711 134 TVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILP 178 (485)
T ss_pred HHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcC
Confidence 999999999999999999999999998877666555544444333
No 34
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.70 E-value=1.5e-15 Score=141.54 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=120.9
Q ss_pred HHHHHHhHHhhhhhHHHHhHHhcC---CCHHHHHH---HHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 023063 31 EVCEKLAVVGFNTNMISYLTTQLH---MPLTKAAN---TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (288)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~---~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~ 104 (288)
.+++.+-... .+....++.++++ .+..+.+. ......++..++.+++|+++||+ |||+++..+..++.++++
T Consensus 31 ~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 31 NLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 4444444444 3556667777774 55554333 33444555568999999999998 999999999999999998
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
++.++.. +.. .....+..+.+.|+++|+|.|...+...++++|.+|++ +|+...+..+.+
T Consensus 109 ~~~~~~~---~~~-----------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~------~rg~~~~~~~~~ 168 (432)
T PRK10406 109 VIACLPG---YET-----------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG------RKGFYASFQYVT 168 (432)
T ss_pred HHhhcCC---chh-----------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC------cccHHHHHHHHH
Confidence 8876541 100 00012356888999999999999999999999999987 699999988888
Q ss_pred HHHHHHHHHHhHhhee--------eccchhhhhhHhHHHHHHH
Q 023063 185 MGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMFLS 219 (288)
Q Consensus 185 ~~~g~~i~~~~~~~l~--------~~~g~~~~f~~~~~~~~~~ 219 (288)
.+.|..+++.+...+. +.+|||..|++.++..++.
T Consensus 169 ~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 169 LIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 8888888876654432 2579999998876655443
No 35
>PRK11043 putative transporter; Provisional
Probab=99.70 E-value=1.7e-15 Score=139.50 Aligned_cols=163 Identities=16% Similarity=0.201 Sum_probs=133.1
Q ss_pred HHHhHHhhhhhHHHH--hHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 023063 34 EKLAVVGFNTNMISY--LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAI 111 (288)
Q Consensus 34 ~~~~~~~~~~~l~~y--l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~ 111 (288)
...++++...+.|.+ +++++|.++.+.++..+.+.++..++.++.|+++||+ |||+.+..+..+..++.+++....
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 333444444445544 6678999999999999999999999999999999998 999999999988888887776654
Q ss_pred cCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHH
Q 023063 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (288)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 191 (288)
+.+.+++.+++.|++.+...+...+++.|.++++ ++++.++..+...++|..+
T Consensus 93 ---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 145 (401)
T PRK11043 93 ---------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPAL 145 (401)
T ss_pred ---------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHH
Confidence 6677888899999988877777788899999886 5788888888888999999
Q ss_pred HHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 192 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
+|.+++++.+.+||+..|++..+..++..+..+.
T Consensus 146 g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 146 APLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988899999998877666555544433
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.70 E-value=6.4e-16 Score=139.65 Aligned_cols=153 Identities=17% Similarity=0.140 Sum_probs=130.2
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~ 122 (288)
+.+..++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+..+..++.+++.++.
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------------ 89 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------------ 89 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH------------
Confidence 4456677889999999999999999999999999999999998 999999999999999998888776
Q ss_pred cccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec
Q 023063 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 202 (288)
+.+.+++.+.+.|++.+...+.....+.|.+|+ +|++..++...+.++|..+++.+.+.+.+.
T Consensus 90 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (377)
T TIGR00890 90 ----------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLITSVINL 152 (377)
T ss_pred ----------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHHHHHhc
Confidence 778888899999999988777777788888874 489999999999999988877777766677
Q ss_pred cchhhhhhHhHHHHHHHHHHHHH
Q 023063 203 IGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.||+..|.+.++..++..+..+.
T Consensus 153 ~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 153 EGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH
Confidence 89999998887766665544433
No 37
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.70 E-value=2.2e-15 Score=136.46 Aligned_cols=160 Identities=15% Similarity=0.196 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+...+..+.....++...+.+|.++++++|+++.+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345555566666666777777777789999999999999999999999999999999999998 9999999999999998
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+++.... . +.+.+.+.+++.|++.+. .....++++|.+|++ +|++..+++.
T Consensus 81 ~~~~~~~~-------------------~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~------~r~~~~~~~~ 132 (366)
T TIGR00886 81 CLWAGLAV-------------------Q--SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKK------IQGTALGLAA 132 (366)
T ss_pred HHHHHHHh-------------------h--hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHh------hhhHHHHHHH
Confidence 88776543 0 456777889999998654 455678899999887 6999999888
Q ss_pred HHHHHHHHHHHHhHhheee----------ccchhhhhhH
Q 023063 183 FVMGAAILVAVTVLVYIQD----------NIGWGWGLGI 211 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~----------~~g~~~~f~~ 211 (288)
...++|..+++.+++.+.. ..+|++.|++
T Consensus 133 ~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 133 GWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 7777777777766655433 3479988843
No 38
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.69 E-value=4.1e-15 Score=137.26 Aligned_cols=170 Identities=12% Similarity=0.139 Sum_probs=134.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
.+|.+....+..++...+.+....+++.|+ +++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+..+.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~ 88 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLW 88 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHH
Confidence 345666666777777777776777888888 56899999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+++..... ...+.+.+++.+++.|+|.+...+...+.+.|.+|++ +|+++.+
T Consensus 89 ~~~~~~~~~~~~------------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~------~~g~~~g 144 (402)
T TIGR00897 89 CVGHAAFIVFGL------------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD------NLSSAVG 144 (402)
T ss_pred HHHHHHHHHHhc------------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH------HHHHHHH
Confidence 888765532210 0114666777888889888777667777788888876 6999999
Q ss_pred HHHHHHHHHH-HHHHHhHhheeeccchhhhhhHhHHH
Q 023063 180 WYYFVMGAAI-LVAVTVLVYIQDNIGWGWGLGIPTFA 215 (288)
Q Consensus 180 ~~~~~~~~g~-~i~~~~~~~l~~~~g~~~~f~~~~~~ 215 (288)
..+.+.++|. .++|.+++++.+..||+..++.....
T Consensus 145 ~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 145 WFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 9999999996 57898888888888876555444433
No 39
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.69 E-value=2.9e-15 Score=137.50 Aligned_cols=168 Identities=11% Similarity=0.086 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 023063 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (288)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~ 105 (288)
......+....+.......+|.+ .+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.++.+.++..++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHH
Confidence 34445555555555555555544 567999999999999999999999999999999998 9999999999988888887
Q ss_pred HHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 023063 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (288)
Q Consensus 106 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (288)
+.... +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..+..+...
T Consensus 85 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~ 136 (392)
T PRK10473 85 CSLAE----------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR------RRAKVLSLLNGIT 136 (392)
T ss_pred HHHhC----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHH
Confidence 77654 5667788899999999988888899999999887 6999999999999
Q ss_pred HHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHH
Q 023063 186 GAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 186 ~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
++|..++|.+++.+.+..||+..|++.+++.++..+..
T Consensus 137 ~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 137 CIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999888788899998888776655554443
No 40
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.69 E-value=7.3e-16 Score=139.65 Aligned_cols=154 Identities=13% Similarity=0.183 Sum_probs=135.2
Q ss_pred hHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 023063 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (288)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~ 123 (288)
....++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+++....
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 80 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------- 80 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc-------------
Confidence 344557788999999999999999999999999999999998 999999999999888888887765
Q ss_pred ccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeecc
Q 023063 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (288)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 203 (288)
+.+.+++.+++.|++.+...+...+++.|.+|++ +|++.+++.+...++|..+++.+.+++.+..
T Consensus 81 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 145 (399)
T TIGR00893 81 ---------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS------ERATAVSIFNSAQGLGGIIGGPLVGWILIHF 145 (399)
T ss_pred ---------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH------HHHHHHHHHHHhchHHHHHHHHHHHHHHHhC
Confidence 6788889999999999999999999999999987 6999999999999999999999999888888
Q ss_pred chhhhhhHhHHHHHHHHHHHHHh
Q 023063 204 GWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 204 g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+|+..|.+.++..++..+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 146 SWQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred CchHHHHHHHHHHHHHHHHhhhe
Confidence 99999988777665555444433
No 41
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.69 E-value=4.4e-15 Score=136.55 Aligned_cols=173 Identities=14% Similarity=0.033 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHH-----HHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK-----AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
....+.+..++...++....+.+|.|++ ++|++..+ .+++.++..+...++.++.|+++||+ |||+.+..+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 4555556777777887777888888886 57887654 47788888899999999999999998 99999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..++.+++.... +.+.+++.+++.|++.+ ..+...+++.|.+|++ +|++.
T Consensus 93 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~~~~~ 143 (408)
T PRK09874 93 GMGIVMVLMGLAQ----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRN------KSGWA 143 (408)
T ss_pred HHHHHHHHHHHHh----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh------hhhHH
Confidence 8888887776654 67778888888888755 4566677888988876 68999
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.+..+.+.++|..++|.+.+.+.+..+|+..|++.+++.++..+.....
T Consensus 144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888899999988877666555544433
No 42
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.68 E-value=1.9e-15 Score=137.73 Aligned_cols=157 Identities=14% Similarity=0.154 Sum_probs=134.4
Q ss_pred hhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 023063 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (288)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~ 119 (288)
...+.+|.+.+ ++|+++.+.+++.+.+.++..++.++.|+++||+ |||+.+..+.++..++.+.+....
T Consensus 9 ~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~--------- 77 (377)
T PRK11102 9 MYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ--------- 77 (377)
T ss_pred HHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc---------
Confidence 34466676664 6899999999999999999999999999999998 999999999999999888887655
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+.+.+.+.+++.|++.+...+...+++.|.+|++ +|++.+++.+....+|..++|.+++.+
T Consensus 78 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 78 -------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE------EFSRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888899999999988888999999999877 699999999999999999999999999
Q ss_pred eeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 200 QDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 200 ~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.+..||+..|++.++..++..+.....
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 139 LVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 888899999887776665554444333
No 43
>PRK03699 putative transporter; Provisional
Probab=99.68 E-value=4.8e-15 Score=136.39 Aligned_cols=175 Identities=11% Similarity=0.126 Sum_probs=140.5
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHH
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l 98 (288)
++++..+...+..++.....+.+...++. +.+++|++..+.+++.+...++..++.+++|+++||+ |||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 34555666656666665555555454554 5578999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
..++.+++.+.. +.+.+++.+++.|++.+...+...+++.|.+|++ +|+...
T Consensus 82 ~~i~~~l~~~~~----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~ 133 (394)
T PRK03699 82 MILAVAGLMFSH----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK------QRGSRL 133 (394)
T ss_pred HHHHHHHHHHcc----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc------hHHHHH
Confidence 888888877655 6777888999999999988888889999999876 688888
Q ss_pred HHHHHHHHHHHHHHHHhHhhee-eccchhhhhhHhHHHHHHHHHHH
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQ-DNIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~-~~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
+..+....+|+.++|.+.+++. +..|||..|.+.++..++..+..
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999998888764 45799999987776655544433
No 44
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.68 E-value=8.3e-15 Score=138.33 Aligned_cols=174 Identities=9% Similarity=0.052 Sum_probs=128.7
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.+.......++.....+.... ...++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAP-LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHH
Confidence 3344333444444454554443 34466788999999999998888899999999999999998 999999999988888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+++.++. +.+.+++.+++.|++.+... ....+++|.+|++ +|+.+.+..
T Consensus 114 ~~~~~~~~~----------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~------~rg~a~g~~ 164 (476)
T PLN00028 114 AVFCMSLVS----------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK------IVGTANGIA 164 (476)
T ss_pred HHHHHHHhc----------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh------heeHHHHHH
Confidence 887777655 56677788888998887643 3456789999987 699999998
Q ss_pred HHHHHHHHHHHHHhHhhee----e-----ccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 182 YFVMGAAILVAVTVLVYIQ----D-----NIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~----~-----~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+...++|+.+++.+.+.+. + ..|||..|++.+++.++..+..++.
T Consensus 165 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 165 AGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777777765554332 1 2589999998887766555444443
No 45
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.68 E-value=2.7e-15 Score=138.22 Aligned_cols=152 Identities=14% Similarity=0.150 Sum_probs=129.4
Q ss_pred HHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 023063 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (288)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~ 117 (288)
++.+.+.+| .+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+..+..++.+.+.++.
T Consensus 25 ~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~------- 95 (393)
T PRK09705 25 LTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP------- 95 (393)
T ss_pred hhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc-------
Confidence 344444444 56678999999999999999999999999999999998 999999999999999999999876
Q ss_pred CCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
+++.++++|++.|+|.+...+...+++.|.+| + +|+++.+.+..+.++|..+++.+++
T Consensus 96 ---------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~------~~~~~~g~~~~~~~~g~~~g~~~~~ 153 (393)
T PRK09705 96 ---------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q------RTPLVMGLWSAALMGGGGLGAAITP 153 (393)
T ss_pred ---------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 67778899999999999988888999999987 4 5899999999999999999999998
Q ss_pred heeecc-chhhhhhHhHHHHHHHH
Q 023063 198 YIQDNI-GWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 198 ~l~~~~-g~~~~f~~~~~~~~~~~ 220 (288)
++.++. +|+..+.+.++..++.+
T Consensus 154 ~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 154 WLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHH
Confidence 887765 79987765544443333
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.67 E-value=3.9e-15 Score=140.69 Aligned_cols=166 Identities=13% Similarity=0.180 Sum_probs=139.2
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHH
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l 98 (288)
.+|+.+..+.+..++..+..... ..+..++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLI-TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 34555555555555555554444 4444567788999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
..++.+.+.+.. +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..
T Consensus 95 ~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 146 (496)
T PRK03893 95 FSVGTLACGFAP----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH------LRNKAS 146 (496)
T ss_pred HHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHH
Confidence 989888887765 6778888999999999999999999999999987 699999
Q ss_pred HHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHH
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTF 214 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~ 214 (288)
+..+.+.++|..++|.+.+.+.+.++|+..|++..+
T Consensus 147 ~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 147 GFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL 182 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 999999999999999999999899999998876443
No 47
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.67 E-value=3.9e-15 Score=135.19 Aligned_cols=171 Identities=11% Similarity=0.062 Sum_probs=131.6
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHH-HHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI-ASIIYQIGMICLT 107 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~-~~~l~~i~~~~~~ 107 (288)
+..++..++.....+.++.|+++++|.++.+.+++.+.+.+...+..++.|+++||+ ||||.++. +..+..++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 456677777777888899999999999999999999999999999999999999998 99887654 4555555555555
Q ss_pred HHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh--HHHHHHHHH
Q 023063 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK--YFNWYYFVM 185 (288)
Q Consensus 108 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 185 (288)
.+. +++.+++.+++.+.+.+...+...++..|..+++ +|++ ..+......
T Consensus 83 ~~~----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 134 (375)
T TIGR00899 83 WNR----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRT------GREAVMFSSVMRAQI 134 (375)
T ss_pred hcc----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc------chhhHHHHHHHHHHH
Confidence 544 5666677777777777777777777888877654 3443 356777788
Q ss_pred HHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 186 GAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 186 ~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
++|..++|.+++++.+..||+..|++.++..++..+..+...+
T Consensus 135 ~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 135 SLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred hHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999988899999999887766655554444333
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=99.67 E-value=7.2e-15 Score=137.36 Aligned_cols=153 Identities=13% Similarity=0.047 Sum_probs=121.1
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+...+..+..+.+...+........+|. +++++|.++.+.++..+.+.++..++.++.|+++||+ |||+++..+..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 4444455555555556666555555554 5889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+++.... ...+++.+.++|+++|+|.+...+...+++.|..+++ ++....+
T Consensus 102 ~~~~~l~~~~~-------------------~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~------~~~~~~s 156 (438)
T PRK10133 102 ALGAALFWPAA-------------------EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES------SGHFRLN 156 (438)
T ss_pred HHHHHHHHHHH-------------------hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh------hHHHHHH
Confidence 99998764222 0126788889999999999999999999999875554 4555678
Q ss_pred HHHHHHHHHHHHHHHhHhhe
Q 023063 180 WYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l 199 (288)
..+....+|..+++.+++.+
T Consensus 157 ~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 157 LAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888889999998887643
No 49
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.67 E-value=5e-15 Score=145.40 Aligned_cols=152 Identities=15% Similarity=0.113 Sum_probs=126.8
Q ss_pred hhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 023063 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (288)
Q Consensus 42 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~ 121 (288)
...+..++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++..++.+++.++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 34455667778999999999999999999999999999999998 999999999999998888887765
Q ss_pred CcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee
Q 023063 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 201 (288)
+.+.+++++++.|+|.|+..+...++++|.+|++ .|+..++++.....+|.++++.++..+..
T Consensus 254 -----------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~------~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 254 -----------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE------KRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999999999987 79999999999999999998877654433
Q ss_pred c-------------cchhhhhhHhHHHHHHHHHH
Q 023063 202 N-------------IGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 202 ~-------------~g~~~~f~~~~~~~~~~~i~ 222 (288)
. .+||+.+++.++..++.++.
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHHH
Confidence 2 35787777666554444433
No 50
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.67 E-value=7.8e-16 Score=144.89 Aligned_cols=156 Identities=11% Similarity=0.017 Sum_probs=125.9
Q ss_pred HHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccc
Q 023063 46 ISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQV 125 (288)
Q Consensus 46 ~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~ 125 (288)
...+.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+.+....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------- 115 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASL--------------- 115 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHH---------------
Confidence 4456788999999999999999999999999999999998 999999998888777776666432
Q ss_pred ccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeecc--
Q 023063 126 CQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI-- 203 (288)
Q Consensus 126 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~-- 203 (288)
|. ...+.+.+++.|++.|++.+...+...++++|++|++ +|+++++++..+.++|..+++.+..++.+..
T Consensus 116 ~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~ 187 (467)
T PRK09556 116 GS--GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR------KRGRFLGFWNISHNLGGAGAGGVALWGANYFFD 187 (467)
T ss_pred hc--ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc------ceeeeEEeeecccchhhhHHHHHHHHHHHhhcc
Confidence 00 0126788889999999999999999999999999988 6999999999999999999998877655442
Q ss_pred -chhhhhhHhHHHHHHHHHHHHH
Q 023063 204 -GWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 204 -g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
+|+..|.+.+++.++..+..+.
T Consensus 188 ~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 188 GHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred CcchhHHHHHHHHHHHHHHHHHH
Confidence 5887777766655544443333
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.67 E-value=8.5e-15 Score=134.11 Aligned_cols=156 Identities=14% Similarity=0.117 Sum_probs=135.0
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
.+.++.+++..++.........+.+|.|+. ++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+..+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 456778888888888888888888888886 5799999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.+..+. +.+.+.+.+++.|++.+...+...+.+.|..+++ +|++.++.
T Consensus 83 ~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 134 (381)
T PRK03633 83 AGCAGLGLMV----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NRGRLLAA 134 (381)
T ss_pred HHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHH
Confidence 9888877655 6788888999999999988877777777877765 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchh
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWG 206 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~ 206 (288)
+..+.++|..++|.+++.+.+...+.
T Consensus 135 ~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 135 YMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHhcccccccch
Confidence 99999999999999999887654333
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.66 E-value=1.1e-14 Score=134.86 Aligned_cols=173 Identities=12% Similarity=0.047 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
++.+....+...+.. ++...+...+++++|.+..+.+++.+.+.++..++.++.|++.||+ |||+++.++.+++.++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 333444444444443 3444455677889999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
+++..+. ...+++.+.+.+++.|+|.|...+...+++.+..|++ ++++..+..+.
T Consensus 83 ~l~~~~~-------------------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 137 (410)
T TIGR00885 83 FLFWPAA-------------------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES------TATRRLNLAQS 137 (410)
T ss_pred HHHHHHH-------------------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh------HHHHHHHHHHH
Confidence 7765443 1125677888899999999999999999999988876 57888888888
Q ss_pred HHHHHHHHHHHhHhheee--------------------------ccchhhhhhHhHHHHHHHHHHH
Q 023063 184 VMGAAILVAVTVLVYIQD--------------------------NIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 184 ~~~~g~~i~~~~~~~l~~--------------------------~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
..++|..++|.+.+.+.. ..+|+.+|.+.+++.++..+..
T Consensus 138 ~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 138 FNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988776532 1369999987777555544333
No 53
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.66 E-value=3.1e-15 Score=140.52 Aligned_cols=149 Identities=10% Similarity=0.114 Sum_probs=128.3
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 023063 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (288)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 131 (288)
+++++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++.+++.... .
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------~ 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------G 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH--------------------H
Confidence 6889999999999999999999999999999998 999999999988888877765443 0
Q ss_pred chHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec-cchhhhhh
Q 023063 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLG 210 (288)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~-~g~~~~f~ 210 (288)
.+.+.+++.++++|++.+...+....+++|.+|++ +|+++.++.+.+.++|..+++.+.+++.+. .||+..|+
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~ 202 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK------ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFY 202 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehh
Confidence 13566888899999999999999999999999987 699999999999999999999999998888 49999999
Q ss_pred HhHHHHHHHHHHHHHhc
Q 023063 211 IPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 211 ~~~~~~~~~~i~~~~~~ 227 (288)
+.++..++..+..+...
T Consensus 203 i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 203 VFGIVGCAWSLLWFVFP 219 (465)
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 88776655554444433
No 54
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.1e-15 Score=137.68 Aligned_cols=178 Identities=13% Similarity=0.060 Sum_probs=154.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhh---HHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTN---MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~---l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~ 96 (288)
+.|.-+-+++..++...++|-+.-+ ..+++.++.++|.+|.+++.+.+.+.+.++-.+.|.++||. +.|..+-+++
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gL 101 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHH
Confidence 3344445566677777777776633 44678888899999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 023063 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (288)
Q Consensus 97 ~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (288)
++..+..+++.++. +.+++.+..++.|...|.-.|.....++.+++++ +||+
T Consensus 102 ilsai~nil~Gfs~----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~------eRG~ 153 (448)
T COG2271 102 ILSAIVNILFGFSP----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRK------ERGT 153 (448)
T ss_pred HHHHHHHHHHhhhh----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcc------ccCc
Confidence 99999999999877 7888888889999999999999999999999998 6999
Q ss_pred HHHHHHHHHHHHHHHHHHhH--hheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 177 YFNWYYFVMGAAILVAVTVL--VYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 177 ~~~~~~~~~~~g~~i~~~~~--~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
..++++.+.|+|+.+.|.+. +++..+++|+..|++++++.++..+..+..
T Consensus 154 ~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 154 WWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred eEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 888888899999999998876655544443
No 55
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.65 E-value=8.1e-15 Score=130.86 Aligned_cols=167 Identities=17% Similarity=0.321 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 023063 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (288)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~ 105 (288)
.+....++..+..+......+.|.+ ++|.+..+.+++.+...+...++.++.|+++||+ |||+.+..+..+..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 3445666777777777777777775 5799999999999999999999999999999998 9999999999999999888
Q ss_pred HHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 023063 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (288)
Q Consensus 106 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (288)
..... +.+.+.+.+++.|++.+...+...+++.|.+|++ +|++.+++.+...
T Consensus 81 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 132 (352)
T cd06174 81 LAFAS----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK------ERGRALGLFSAGF 132 (352)
T ss_pred HHHhc----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc------chhhhhhHHHHHH
Confidence 87765 6778889999999999999999999999999987 6999999999999
Q ss_pred HHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHH
Q 023063 186 GAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 186 ~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~ 222 (288)
++|..++|.+.+.+.+..+|+..+++.++..++..+.
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (352)
T cd06174 133 GLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALL 169 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888999888777665554443
No 56
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.65 E-value=1.3e-14 Score=133.67 Aligned_cols=163 Identities=17% Similarity=0.105 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+.+....++..++.......++.. .++++.++.+.+++.+.+.+...++.+++|+++||+ |||++++.+..+..++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 34455566666666554444444444 568899999999999999999999999999999998 9999999999998888
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+.+.... +. ++.++++|++.+...+...+++.|.+|++ +|+++.++..
T Consensus 82 ~~~~~~~~----------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~------~~~~a~~~~~ 130 (393)
T PRK11195 82 CLLMLFGI----------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGE------KLVKANGWME 130 (393)
T ss_pred HHHHHHHH----------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHH
Confidence 77765543 22 56788999999999999999999999987 7999999999
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (288)
...++|..+||.++|++.+. .|+..+.+.+...+++
T Consensus 131 ~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 131 GSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999988774 3665555554433333
No 57
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.65 E-value=1.9e-15 Score=140.04 Aligned_cols=173 Identities=14% Similarity=0.179 Sum_probs=133.4
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~ 106 (288)
++...++..++.......+|.+.+ +++.++.+.+++.+...+...++.++.|+++||+ |||+.+..+..+..++.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 334455555555555566666664 5678999999999999999999999999999998 99999998887777776655
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
...... ...+.+.+++.+++.|++.+...+...+++.|.+|++ +|++..+..+...+
T Consensus 100 ~~~~~~-----------------~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 156 (417)
T PRK10489 100 ALNAFL-----------------PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVR 156 (417)
T ss_pred HHHHHc-----------------CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHh
Confidence 432100 0114566777888889888877788888899999876 68999999999999
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHH
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~ 224 (288)
+|..++|.+++.+.+..||++.|.+.++..++..+...
T Consensus 157 ~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 157 LGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999988877666555544433
No 58
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.65 E-value=1.9e-15 Score=136.64 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=131.8
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 023063 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (288)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~ 124 (288)
...++.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+..+.++..++.+++..+.
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-------------- 81 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST-------------- 81 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh--------------
Confidence 44577788999999999999999999999999999999998 999999999999999988888766
Q ss_pred cccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHH-HhHhheeecc
Q 023063 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV-TVLVYIQDNI 203 (288)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~-~~~~~l~~~~ 203 (288)
+.+.+++.+++.|++.+...+...+++.|.+|++ +|++..++.+.+.++|..+++ .+.+.+.+..
T Consensus 82 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00881 82 --------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS------ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY 147 (379)
T ss_pred --------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh------hheeeEeehhccchhHHHHHHHHHHHHHHhcC
Confidence 6778889999999999999999999999999987 699999999999999999999 5666677778
Q ss_pred chhhhhhHhHHHHHHHHHHHHHh
Q 023063 204 GWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 204 g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+|+..|++.+++.++..+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred CchhHHHHHHHHHHHHHHHHhee
Confidence 99998887776655544444433
No 59
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.64 E-value=8.4e-15 Score=136.29 Aligned_cols=143 Identities=20% Similarity=0.297 Sum_probs=121.5
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchH
Q 023063 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (288)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (288)
.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.++..... ...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 127 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAA-------------------FALSV 127 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhc-------------------cccch
Confidence 3389999999999999999999999999998 999999999999999888886544 11244
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhH---hheeeccchhhhhhH
Q 023063 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL---VYIQDNIGWGWGLGI 211 (288)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~---~~l~~~~g~~~~f~~ 211 (288)
+.+++++++.|+|.+...+...++++|.+|++ +|++..++++.+.++|..+++.++ ....+..+|+..|++
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKA------LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChh------hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 67888999999999999999999999999987 699999999999999999999998 666677899999988
Q ss_pred hHHHHHHHHHHH
Q 023063 212 PTFAMFLSIIAF 223 (288)
Q Consensus 212 ~~~~~~~~~i~~ 223 (288)
.++..++.++..
T Consensus 202 ~~~~~~~~~~~~ 213 (481)
T TIGR00879 202 QLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHHH
Confidence 655554444333
No 60
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.2e-14 Score=130.90 Aligned_cols=182 Identities=17% Similarity=0.166 Sum_probs=147.4
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhcc-chhHHH-HHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYA-GRFWTI-TIASII 98 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~-Grr~~i-~~~~~l 98 (288)
.+.+|.+.++.++..+.-|++..|.|.|+.|..|++..++++..+.+..++..+.++.||+|||++ |||..+ +++++.
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999998 777544 444445
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
..++.+..+... +.+..+..+..+.+|+-..+....+.....|..|++ ..|++.
T Consensus 331 i~~~~~~~w~~~--------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~------AaGtA~ 384 (448)
T COG2271 331 ITASLVLYWLAP--------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK------AAGTAT 384 (448)
T ss_pred HHHHHHHHHcCC--------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh------hccchh
Confidence 555555554433 225566666677777777776677777788998887 588888
Q ss_pred HHHHHHHHH-HHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 179 NWYYFVMGA-AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 179 ~~~~~~~~~-g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+...+...+ |...+....+++.+.+||...|.+..+..+++.+.+....+
T Consensus 385 Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 385 GFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred chhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 888887777 88889999999999999999998888777777766655543
No 61
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.63 E-value=2e-14 Score=135.28 Aligned_cols=178 Identities=13% Similarity=-0.002 Sum_probs=131.9
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.+|.+.+..++....++++..++|.|+++++|++..++++......++..++.+++|+++||+ |||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4577777777787888888889999999999999999999999989999999999999999998 998877665444433
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+..+..+.. ..+.....+.+++.|+..............|.+|++ .++++.++.
T Consensus 337 ~~~~~~~~~--------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~------~~g~a~gi~ 390 (467)
T PRK09556 337 IFTLGVYQH--------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK------AIGVANGIK 390 (467)
T ss_pred HHHHHHHHh--------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh------hHHHHHHHH
Confidence 332222211 113334445555556443333333345677999987 699999999
Q ss_pred HHHHHH-HHHHHHHhHhheee------------ccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 182 YFVMGA-AILVAVTVLVYIQD------------NIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 182 ~~~~~~-g~~i~~~~~~~l~~------------~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+...++ |+.++|.+.|++.+ ..||+..|.+..++.+++.+..+..
T Consensus 391 ~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 391 GTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 998886 77999999999988 5689999988877777766555443
No 62
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=4.8e-14 Score=129.76 Aligned_cols=175 Identities=14% Similarity=0.090 Sum_probs=127.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+..+..+...+.....++.+..++|.|+++++|+++.+.+.+.+...+...++.+++|+++||+ |||+.+..+.....+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~ 294 (393)
T PRK15011 216 RDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVC 294 (393)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 3334333344444445555567889999999999999999888777777888899999999998 999988776655544
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
......... +.+.+.+.+++.+++.+...+...++..|.+|+ ++++..+.+
T Consensus 295 ~~~~~~~~~----------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-------~~g~~~~~~ 345 (393)
T PRK15011 295 FYAGMLMAH----------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-------QAGSATTLY 345 (393)
T ss_pred HHHHHHHHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CcchHHHHH
Confidence 433332222 344445556666666666556667778888875 488899998
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+...++|..++|.++|.+.+..||+..|.+..++.+++++..+..
T Consensus 346 ~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 346 TNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 888999999999999999998899998888777776666555543
No 63
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.62 E-value=1.9e-14 Score=135.38 Aligned_cols=152 Identities=14% Similarity=0.187 Sum_probs=121.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCcccccccccc
Q 023063 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL-PQLRPPPCEGEQVCQEANKG 132 (288)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~ 132 (288)
+.++.+.+++.+.+.++..++++++|+++||+ |||++++++.+++.++.+...+.... +... .++..
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~-----------~~~~~ 118 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIG-----------PDNTG 118 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhcccccccc-----------ccchh
Confidence 88999999999999999999999999999998 99999999999998888777653200 0000 00112
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee--------eccc
Q 023063 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ--------DNIG 204 (288)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~--------~~~g 204 (288)
....++++|++.|++.|...+...++++|.+|++ +|++.++....+..+|..+++.++..+. +..|
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 192 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG 192 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 3566788999999999999999999999999987 6999999999999999999887655432 4568
Q ss_pred hhhhhhHhHHHHHHHHHHH
Q 023063 205 WGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 205 ~~~~f~~~~~~~~~~~i~~ 223 (288)
||+.|++.++..++..+..
T Consensus 193 Wr~~f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 193 WRYMFASEAIPALLFLMLL 211 (479)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9999988776665554433
No 64
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.62 E-value=2.4e-14 Score=134.41 Aligned_cols=150 Identities=12% Similarity=0.069 Sum_probs=124.0
Q ss_pred HHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccc
Q 023063 47 SYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVC 126 (288)
Q Consensus 47 ~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~ 126 (288)
..+.+++|++..+.+++.+.+.+...++.++.|+++||+ |||++++.+.++..++.+++..+.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345578999999999999999999999999999999998 999999999988888888776655
Q ss_pred cccccchHHHHHH-HHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccch
Q 023063 127 QEANKGQVAILYV-SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 127 ~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
+.+.+++ .+++.|++.+...+...+++.+.+++ +|+++.++.+.+..+|..++|.+.+.+.+.+||
T Consensus 106 ------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 106 ------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYR-------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred ------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHh-------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 4555544 45788998887666667788888863 599999999999999999999999999888999
Q ss_pred hhhhhHhHHHHHHHHHHHHHh
Q 023063 206 GWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 206 ~~~f~~~~~~~~~~~i~~~~~ 226 (288)
++.|++.+++.++..+..++.
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999887766555444433
No 65
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.62 E-value=4.8e-14 Score=129.75 Aligned_cols=180 Identities=7% Similarity=-0.093 Sum_probs=131.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.+|.+....++...++..+.++++.|+++++|.++.+.+++.+...+...++.++.|+++||+ |||+.++.+.....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567777788888888888889999999999999999999999999999999999999999998 999999887766555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+..........+.. .........+.+++.+++.+...+...++..|..+ +++..++..
T Consensus 81 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~ 138 (396)
T TIGR00882 81 LFAPFFIYVFGPLL--------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--------NSNFEYGKA 138 (396)
T ss_pred HHHHHHHHHhhhHH--------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--------hcccccchh
Confidence 44332211100000 00022334556677788888877777777666422 234456666
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
....++|..++|.+++.+.+ .+|+..|++.+++.++..+..+.
T Consensus 139 ~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 139 RMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred hhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHH
Confidence 77788999999999887755 59999998877766655544333
No 66
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.61 E-value=3.8e-15 Score=144.94 Aligned_cols=200 Identities=14% Similarity=0.155 Sum_probs=148.2
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
++.+...+....+......++.......+.++++++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 34343344434455555556666666777889999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCC----------------CCCCCC-----------cccccccc--cchHHHHHHHHHHHHHhccCc
Q 023063 101 IGMICLTISAILPQLR----------------PPPCEG-----------EQVCQEAN--KGQVAILYVSLLLAALGSGGI 151 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~----------------~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~l~g~g~g~~ 151 (288)
++.++++++..+..-+ ...|.. ...|.... +..+..+++++++.|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 9999988654221000 011210 00222222 224567778999999999999
Q ss_pred chhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeecc----------------------chhhhh
Q 023063 152 RPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI----------------------GWGWGL 209 (288)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~----------------------g~~~~f 209 (288)
.+...+++.|.+|++ +|+...++++.+..+|..+++++++++.+.+ +|+..|
T Consensus 190 ~~~~~~~i~d~~~~~------~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 190 FPLGISYIDDFAKSK------NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred hhcCchhhhccCCcc------ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 999999999999988 6999999999999999999999998776432 277778
Q ss_pred hHhHHHHHHHHHHHHHhc
Q 023063 210 GIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 210 ~~~~~~~~~~~i~~~~~~ 227 (288)
++.+++.++..+.++...
T Consensus 264 li~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 264 LICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHHHHHHHhCc
Confidence 777766666555444433
No 67
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.61 E-value=8.5e-14 Score=129.81 Aligned_cols=178 Identities=13% Similarity=0.022 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHH-hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.+.+....+..++..+...+.+...+.+ ++|++.+|.+++.+++.+.+.++.+..|++.||+ |.|+++.++.++..+.
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHH
Confidence 3333444555666666666666667655 7999999999999999999999999999999998 9999999999999888
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
++++.++... ...+++.+++.+++.|++ +...+.....+++++|++ +||++.++..
T Consensus 114 ~~~~~~a~~~-----------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~------~rG~A~Gi~~ 169 (462)
T PRK15034 114 CVWLGIAVQN-----------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA------KQGSALGING 169 (462)
T ss_pred HHHHHHHHcc-----------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh------HhHHHHHHHH
Confidence 8888765200 012678888999999998 667788889999999987 6999999986
Q ss_pred HHHHHHHHHHHHhHhhee-----e-------------ccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 183 FVMGAAILVAVTVLVYIQ-----D-------------NIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
...++|..+++.+.+.+. . ..+|+..+++..++.++..+..++.
T Consensus 170 g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 170 GLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666665554443221 1 2346665556555555555444444
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=9.7e-14 Score=127.75 Aligned_cols=178 Identities=10% Similarity=0.109 Sum_probs=123.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhccchhHHHH-HHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTIT-IASIIY 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~~i~-~~~~l~ 99 (288)
...+..++..++.+.+...+.+.++.|+.+++|.++++.+++.+...+ ...++++++|+ +||+ ||||.++ .+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~ 92 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLG 92 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHH
Confidence 345556667888888888888999999999999999999998776655 45555555666 9998 9988754 444544
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHH-HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVS-LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
.++..+..++. +.+.+++. +++.+.+ +...+...++..|..+++++ ..+...
T Consensus 93 ~~~~~~~~~~~----------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~ 145 (393)
T PRK15011 93 VLACTLFAWNR----------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTGR----EAVMFS 145 (393)
T ss_pred HHHHHHHHHhh----------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccc----hHHHHH
Confidence 45555555443 44444433 3334443 45566667777776654420 123445
Q ss_pred HHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+..+.+.++|..++|.+++++.+++||+..|++.++..++..+..+...+
T Consensus 146 ~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 146 SFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 67888999999999999999998899999998887766555554444333
No 69
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.61 E-value=3.1e-14 Score=133.44 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=120.8
Q ss_pred hHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 023063 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (288)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~ 123 (288)
....|+.++ |++..+.+++.+...++..+++++.|+++||+ |||++++.+.++..++.+.+.+...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~------------ 115 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW------------ 115 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc------------
Confidence 344577777 99999999999999999999999999999998 9999999999988888877765430
Q ss_pred ccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHH-HHHhHhheeec
Q 023063 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV-AVTVLVYIQDN 202 (288)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i-~~~~~~~l~~~ 202 (288)
...+.+.+++.+++.|++.+...+.....+.|++|++ +|++..++++.+.++|+.+ +|.....+...
T Consensus 116 ------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 116 ------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred ------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChH------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 0114566778888999999988888888899999887 6999999999999998754 55443333333
Q ss_pred cchhhhhhHhHHHHHHHHHHH
Q 023063 203 IGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~i~~ 223 (288)
.||+..|++.++..++..+..
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 489999988776655544333
No 70
>PRK09952 shikimate transporter; Provisional
Probab=99.61 E-value=5.7e-14 Score=131.22 Aligned_cols=176 Identities=10% Similarity=0.068 Sum_probs=123.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhc--CCCHHHHHHHH-----HHHHHHHhhhHHHHHHHHHhccchhHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL--HMPLTKAANTL-----TNFGGTGSLTPLIGAFVADAYAGRFWTI 92 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~~~~~~~~~~-----~~~~~~~~i~~~~~G~laDr~~Grr~~i 92 (288)
+++..+...+..+++.+-...+....+.+..+++ +.++.+ +.+. .+..++..++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3455555555556555544443333444555554 566654 3332 233455667888899999998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhh
Q 023063 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (288)
Q Consensus 93 ~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 172 (288)
.++.+++.++++++.++..+... .......+.+.|+++|++.|...+...+++.|.+|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------ 157 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTI--------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN------ 157 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHH--------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC------
Confidence 99999999999888876511000 0001225778899999999999999999999999987
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHhhee--------eccchhhhhhHhHHHHH
Q 023063 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMF 217 (288)
Q Consensus 173 ~~~~~~~~~~~~~~~g~~i~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 217 (288)
+|+...+..+.+..+|..++..+...+. +.+|||..|++.++..+
T Consensus 158 ~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 158 KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 6899888888888899888876665443 35799999987766543
No 71
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=5.4e-14 Score=133.24 Aligned_cols=174 Identities=17% Similarity=0.120 Sum_probs=123.0
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCC--HHH--HHH--HHHHHHHHHhhhHHHHHHHHHhccchhHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMP--LTK--AAN--TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~--~~~--~~~--~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~ 95 (288)
+.+....+..+++.+-+.. ..+...++.++++.+ +.. .+. +.+...++..++.+++|+++||+ |||+++.++
T Consensus 16 ~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 93 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 3444444555666554443 344556777777533 221 111 13566678889999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 023063 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (288)
Q Consensus 96 ~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
++++.+++++++++..+... ..-.+.++++.|+++|+|.|+..+...++++|.+|++ +|+
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~--------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~------~Rg 153 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATI--------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR------KRG 153 (490)
T ss_pred HHHHHHHHHHHHhcccHHHH--------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC------CCc
Confidence 99999999998876511000 0000124788899999999999999999999999987 699
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhee--------eccchhhhhhHhHHHHH
Q 023063 176 KYFNWYYFVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMF 217 (288)
Q Consensus 176 ~~~~~~~~~~~~g~~i~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 217 (288)
...++...+..+|..+++.+...+. ..+|||+.|++.++..+
T Consensus 154 ~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 154 FMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 9999888888888877775543321 25799999988665433
No 72
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.59 E-value=1.1e-13 Score=131.56 Aligned_cols=144 Identities=17% Similarity=0.179 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccch
Q 023063 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (288)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (288)
+.+..+.+++.+...++..++.+++|+++||+ |||+++.++.++..++.++..++.. . ....+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~---~-------------~~~~~ 114 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPG---S-------------SPKSV 114 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccC---c-------------ccchH
Confidence 34566778899999999999999999999998 9999999999999998887776440 0 00013
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee------------
Q 023063 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD------------ 201 (288)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~------------ 201 (288)
...++++|++.|++.|+..+..+.+++|.+|++ +|++..+..+....+|..+++.+...+..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~------~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 188 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKK------WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADE 188 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 567889999999999999999999999999998 69999999999999999888877654321
Q ss_pred -----------ccchhhhhhHhHHHHHHHH
Q 023063 202 -----------NIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 202 -----------~~g~~~~f~~~~~~~~~~~ 220 (288)
..+||..|.+.++..++..
T Consensus 189 ~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~ 218 (502)
T TIGR00887 189 ASCTGSCVPAVDYMWRILIGFGAVPALLAL 218 (502)
T ss_pred ccccccccchhcccHHHHHHHHHHHHHHHH
Confidence 2379998876655444433
No 73
>PRK03699 putative transporter; Provisional
Probab=99.59 E-value=7.3e-14 Score=128.54 Aligned_cols=171 Identities=16% Similarity=0.135 Sum_probs=131.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++.+.+..++...+.+++..++|.|+++++|++..+++.+.+.+.++..++.+++|+++||+ |||+.+..+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3455555566666677788889999999999999999999999999999999999999999998 999988877766555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+..+..... +...+.+..++.|++.+...+...++..|..+.+ ++...+..
T Consensus 284 ~~~~~~~~~----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~ 334 (394)
T PRK03699 284 LMYLFVNTD----------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFI 334 (394)
T ss_pred HHHHHHHcC----------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHH
Confidence 544443222 2333444556677777777777777778877653 45567777
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHH
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~ 222 (288)
....++|..++|.+.|++.+..|++..+++..++.+++.+.
T Consensus 335 ~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 335 LTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 78889999999999999999899998888777766665543
No 74
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.59 E-value=4.6e-14 Score=131.74 Aligned_cols=156 Identities=12% Similarity=0.079 Sum_probs=125.1
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 023063 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (288)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~ 124 (288)
...++++ .|+++.+.+++.+.+.++..++.++.|+++||+ |||+.+..+.++..++.+...... +.
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~---~~--------- 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVP---WA--------- 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccc---cc---------
Confidence 3446665 599999999999999999999999999999998 999999999888888877665432 10
Q ss_pred cccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhh-eeecc
Q 023063 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY-IQDNI 203 (288)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~-l~~~~ 203 (288)
..+...+.+.+++.|++.+...+.....+.|.+|++ +|++++++++.+.++|+.+++.+.+. +....
T Consensus 115 ------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 115 ------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS------ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred ------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc------cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 114566777888999999998888889999999987 69999999999999999999877764 44456
Q ss_pred chhhhhhHhHHHHHHHHHHHHHh
Q 023063 204 GWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 204 g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+|+..|++.+++.++..+..++.
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999988777766655444333
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=9.1e-14 Score=128.94 Aligned_cols=182 Identities=7% Similarity=-0.087 Sum_probs=119.7
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+..|.+....++...++..+.++++.|+++++|+++.+.+++.+...+...+++++.|+++||+ |||++++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4666666777777787878889999999999999999999999999999999999999999998 999999887665554
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+..........+.. .........++.++.+.+.....+....+. +..++ +++..++..
T Consensus 89 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~g~~~g~~ 146 (420)
T PRK09528 89 LFGPFFIYVFAPLL--------------QYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVSR-------RSGFEYGRA 146 (420)
T ss_pred HHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHHHh-------hccccchhh
Confidence 44322211100000 000011111222222322222222222222 11111 466677777
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
....++|..++|.+++.+.+ .+|+..|++.++..++.++..+...
T Consensus 147 ~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 147 RMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccc
Confidence 78889999999999998865 4888888887766665555554443
No 76
>PRK09952 shikimate transporter; Provisional
Probab=99.58 E-value=1.7e-13 Score=128.06 Aligned_cols=181 Identities=15% Similarity=0.102 Sum_probs=127.5
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
++....+....++..+.+|....+.+.|+++.+|++......+.........++.++.|+++||+ |||+.+..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~ 327 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGT 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 33344444566677788888889999999999999887765555566667788889999999998 99999888776655
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.+..... .....+...+..++.+++.+...+...++++|.+|++ .|+...++
T Consensus 328 ~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~------~r~tg~g~ 383 (438)
T PRK09952 328 LSAFPFFMALE------------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGAS------YRYSGAGV 383 (438)
T ss_pred HHHHHHHHHHH------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcc------hhHHHHhH
Confidence 54433332210 0112333344455667777777788889999999997 58877777
Q ss_pred H-HHHHHHHHHHHHHhHhheeecc--chhhhhhHhHHHHHHHHHHHHHh
Q 023063 181 Y-YFVMGAAILVAVTVLVYIQDNI--GWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 181 ~-~~~~~~g~~i~~~~~~~l~~~~--g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
. +.+..+|+.++|.+.+++.+.. +|...+.+..+..+++.+..+..
T Consensus 384 ~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 384 GYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 4 4455689999999999987744 37777776666666665555443
No 77
>PRK15075 citrate-proton symporter; Provisional
Probab=99.58 E-value=2.1e-13 Score=127.24 Aligned_cols=172 Identities=14% Similarity=0.099 Sum_probs=120.5
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHH-HHHHH-----HHHhhhHHHHHHHHHhccchhHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANT-LTNFG-----GTGSLTPLIGAFVADAYAGRFWTIT 93 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~-~~~~~-----~~~~i~~~~~G~laDr~~Grr~~i~ 93 (288)
+++....+.+..+++.+-...+. .....+.++++.++.+.+.. .+... +...++.++.|+++||+ ||||.++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 33444444555555555554443 44457778888877665433 22222 22246788999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhh
Q 023063 94 IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (288)
Q Consensus 94 ~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
.+..++.++.+++.++..+... .......+++.|++.|++.+...+...++++|.+|++ +
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~ 150 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATI--------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG------R 150 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHH--------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc------c
Confidence 9999999999888875510000 0000124678899999999999998899999999988 6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHhhe--------eeccchhhhhhHhH
Q 023063 174 TWKYFNWYYFVMGAAILVAVTVLVYI--------QDNIGWGWGLGIPT 213 (288)
Q Consensus 174 ~~~~~~~~~~~~~~g~~i~~~~~~~l--------~~~~g~~~~f~~~~ 213 (288)
|++..++...+.++|..+++.+++.+ .+.+|||..|++..
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 99999998888777777777666554 24679999998654
No 78
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.58 E-value=1.6e-13 Score=126.85 Aligned_cols=152 Identities=9% Similarity=0.024 Sum_probs=131.8
Q ss_pred hhHHHHhHHhcCCCHHH-HHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTK-AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~ 121 (288)
++...|+.+++|+++.+ .+.+.+.+..++.++.+++|+++||+ |-|+++.++.+...+..+++.++.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~----------- 113 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT----------- 113 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 45667888999999999 99999999999999999999999998 999999999999999999999876
Q ss_pred CcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee
Q 023063 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 201 (288)
+...+.+.|++.|++.|... ....++..++|++ +|+++.++...+..+|.+++++++++ ..
T Consensus 114 -----------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k------ER~ratsi~~sg~~vG~~Ia~~L~ql-l~ 174 (511)
T TIGR00806 114 -----------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS------RYQRAAAYSRAAVLLGVFLSSVLGQL-LV 174 (511)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 67889999999999999999 8899999999988 79999999999999999999999998 45
Q ss_pred ccchhhh---hhHhHHHHHHHHHHHHH
Q 023063 202 NIGWGWG---LGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 202 ~~g~~~~---f~~~~~~~~~~~i~~~~ 225 (288)
.+||+.- .++......++++.-++
T Consensus 175 s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 175 TLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 6788753 34444445555444333
No 79
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.57 E-value=1.3e-13 Score=124.36 Aligned_cols=188 Identities=13% Similarity=0.061 Sum_probs=152.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+.|.++. ....+..++..+...+.+..++++++|+|+.|.+++..+..+.+.+..++-|.+.||+ |.|++..+++++.
T Consensus 12 ~~~~L~~-S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWL-STLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHH-HHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHH
Confidence 3444543 3456666777778888899999999999999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.+-.+...++. ++.+.+.+++..++.|++.+. +++..+++++.||++ +.|.+.+
T Consensus 90 ~IP~~~~~~a~-------------------~~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~------~qG~AlG 143 (417)
T COG2223 90 LIPCLGLAFAV-------------------TYPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKE------KQGLALG 143 (417)
T ss_pred HHHHHHHHHHc-------------------cCCchHHHHHHHHHHhcccce-ehcccccccccCChh------hhhHHHH
Confidence 88888888877 233446777777888887554 456678899999998 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccc---hhhhhhHhHHHHHHHHHHHHHhccceeecCCC
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIG---WGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPA 236 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g---~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (288)
++. ..|+|..+...+++.+....| |+....+..+..++..+.+++..++.+..++.
T Consensus 144 I~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~ 202 (417)
T COG2223 144 IAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRAS 202 (417)
T ss_pred Hhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 988 899999999999998888888 88888888777777777777766655443333
No 80
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=1.7e-13 Score=125.97 Aligned_cols=170 Identities=12% Similarity=0.094 Sum_probs=130.0
Q ss_pred HHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 023063 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAI 111 (288)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~ 111 (288)
.+..+++.....+++.|+.+ .|++ +.+.....+.++..++.++.|++.||+ |||+.+..+..+..++.+......
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 33455566666778888764 4653 345556677778888899999999998 999999888887777776665543
Q ss_pred cCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHH
Q 023063 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (288)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 191 (288)
+.+.+.+..++.|++.+...+.......|.+|++ +|++..++++...++|..+
T Consensus 301 ---------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~ 353 (399)
T PRK05122 301 ---------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ------NRGAALGAYSVFLDLSLGI 353 (399)
T ss_pred ---------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHH
Confidence 4455666778889988887877777788888776 7999999999999999999
Q ss_pred HHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccceeec
Q 023063 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNL 233 (288)
Q Consensus 192 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (288)
++.+.+++.+..||+..|.+.+++.+++++......++.+++
T Consensus 354 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 354 TGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRA 395 (399)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999998888999999888877777766655554444333
No 81
>TIGR00898 2A0119 cation transport protein.
Probab=99.56 E-value=6.2e-14 Score=132.96 Aligned_cols=145 Identities=16% Similarity=0.232 Sum_probs=125.2
Q ss_pred HhHHhcCCC---HHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 023063 48 YLTTQLHMP---LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (288)
Q Consensus 48 yl~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~ 124 (288)
.+.++++++ ..+.++..+.+.++..++.++.|+++||+ |||++++++.++..++.++..++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 456788998 89999999999999999999999999998 999999999999988888887765
Q ss_pred cccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccc
Q 023063 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG 204 (288)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g 204 (288)
+++.+++.+++.|++.+...+...+++.|.+|++ +|+...+....+..+|..+++.++..+. +
T Consensus 179 --------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~ 241 (505)
T TIGR00898 179 --------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK------QRAIVGTLIQVFFSLGLVLLPLVAYFIP---D 241 (505)
T ss_pred --------cHHHHHHHHHHHHhhccchHHHHHHHhheecChh------hhHHHHHHHHHHHHHHHHHHHHHHHHhh---H
Confidence 6788899999999999999999999999999987 6899999888899999999998876654 3
Q ss_pred hhhhhhHhHHHHHHHHHHHH
Q 023063 205 WGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 205 ~~~~f~~~~~~~~~~~i~~~ 224 (288)
|++.|++.++..++..+..+
T Consensus 242 wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 242 WRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99988887766655554443
No 82
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=2.8e-13 Score=122.97 Aligned_cols=165 Identities=12% Similarity=0.059 Sum_probs=125.8
Q ss_pred HHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
.++..........+++.|+.+++|.++.+.+.+.....+...++.+++|+++||+ |||+.+.++.++..+..+......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444556788899889999999999888777777778889999999998 999998887765555444333322
Q ss_pred hcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 023063 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL 190 (288)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 190 (288)
+.+.+.+..++.+++.+...+...++..|..|++ +++..+.++...++|..
T Consensus 287 ----------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~ 337 (375)
T TIGR00899 287 ----------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGRVGWI 337 (375)
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHHHHHH
Confidence 4455556667778887777777778888888753 67889999999999999
Q ss_pred HHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 191 VAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 191 i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
++|.+.+.+.+..||+..|++.+++.+++.+....
T Consensus 338 ~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 338 IAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 99999999988889999998888777666655443
No 83
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=3.7e-13 Score=120.11 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhH-HHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITIASIIYQIG 102 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-~i~~~~~l~~i~ 102 (288)
++...+..++..........+.+.|+.+.+|.+..+.+.......++..++.++.|+++||+ |||+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHH
Confidence 33444455666667777778888898887899999999999999999999999999999998 9999 999999888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+...... +.+...+..++.+++.+...+...+++.|..|++ +|++.++..+
T Consensus 256 ~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 307 (352)
T cd06174 256 LLLLALAP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPE------ARGTASGLFN 307 (352)
T ss_pred HHHHHHhc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH------HHHHHHHHHH
Confidence 87777654 4566777888899999999999999999999976 6999999999
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~ 224 (288)
...++|..+++.+.+.+.+..+|+..|.+.+++.+++.+...
T Consensus 308 ~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 308 TFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999888999999888887766665443
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.55 E-value=1.1e-13 Score=125.82 Aligned_cols=168 Identities=14% Similarity=0.038 Sum_probs=126.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++......++....++....+++.|+++++|.+..+.+.......+...++.+++|+++||+ |||+.+..+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3456666667777788888888999999888999999999999899999999999999999998 999987765544443
Q ss_pred HHH-HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 102 GMI-CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
..+ ...... ...+.+.+.+..++.+++.+...+...+++.|.+|++ +|++..+.
T Consensus 298 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~ 352 (394)
T TIGR00883 298 LAVPLLMALL-------------------DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE------VRYTGASL 352 (394)
T ss_pred HHHHHHHHHh-------------------cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc------ceeeEeee
Confidence 332 221111 0113455556667778888888888999999999987 58888886
Q ss_pred -HHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHH
Q 023063 181 -YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFA 215 (288)
Q Consensus 181 -~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~ 215 (288)
++.+..+|..++|.+.+++.++.| |+..++...+.
T Consensus 353 ~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 353 AYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred hhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 456667899999999999988888 77655554443
No 85
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.55 E-value=2.5e-14 Score=127.71 Aligned_cols=165 Identities=15% Similarity=0.089 Sum_probs=142.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 023063 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (288)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 131 (288)
.++-++.+.|++.....+...+..++.|.+.||+ |+|-.+++|+.++...++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 3556788999999999999999999999999998 999999999999999999999877
Q ss_pred chHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhH
Q 023063 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGI 211 (288)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~ 211 (288)
++++++++|.++|+|.++......++++|.||++. +|++++|+......+|-.+||.++|.+.+..|++.+|.+
T Consensus 158 -sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlV 231 (464)
T KOG3764|consen 158 -SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLV 231 (464)
T ss_pred -hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHH
Confidence 67889999999999999999999999999999986 899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhccce--ee-cCCCCChhhHHH
Q 023063 212 PTFAMFLSIIAFLIGYPLY--RN-LDPAGSPFTRLL 244 (288)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~~--~~-~~~~~~~~~~~~ 244 (288)
.+++.++...+-++..+.. ++ +.+++.+..++.
T Consensus 232 L~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll 267 (464)
T KOG3764|consen 232 LAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLL 267 (464)
T ss_pred HHHHHHHHHHHHHheeCccccCccccccCccHHHHH
Confidence 9988877666555444322 22 233444554443
No 86
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.54 E-value=8.6e-13 Score=121.52 Aligned_cols=177 Identities=11% Similarity=-0.000 Sum_probs=134.4
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+..+.+.+..++...+++++..++|.|+.+ +|++..+++...+.+.++..++.++.|+++||+ |||+.+..+..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 445555556666778888888999999976 799999999999999999999999999999998 999999888877777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+.+.... . +.... ..++.+++.+...+.......|.+++++ ++++.++..
T Consensus 283 ~~~~~~~~~-------------------~--~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~ 334 (393)
T PRK09705 283 GFCGFIWLP-------------------L--QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFM 334 (393)
T ss_pred HHHHHHHcc-------------------c--hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHH
Confidence 665443222 0 11111 1235577777777777767777775432 689999999
Q ss_pred HHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+...++++.++|.+.|++.+..| |...|.+.++..+...+......+
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999876 777787777666666555554443
No 87
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=3.1e-13 Score=122.02 Aligned_cols=170 Identities=12% Similarity=0.069 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+.+....++..........+.+.|. +++|.++.+.+.+.....+...++.++.|+++||+ |||+.+.++..+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444444555555555555666675 46889999999999999999999999999999998 9999999888888877
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.++..... ......+....++.+++.+...+..++++.|.+|++ +|++..+.++
T Consensus 284 ~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~g~~~ 337 (377)
T TIGR00890 284 MAAMLFIP--------------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPA------NSAANYGFLY 337 (377)
T ss_pred HHHHHHcc--------------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhh------hhhhHhHHHH
Confidence 76655433 002223334456677788877777888999999987 6999999999
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
...++|..++|.+.+.+.+..||+..|.+.+++.++++
T Consensus 338 ~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 338 TAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999999998999998888776655543
No 88
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.54 E-value=3.6e-13 Score=126.11 Aligned_cols=157 Identities=15% Similarity=0.193 Sum_probs=140.1
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 023063 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (288)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 131 (288)
+++++..+.+++.+.+..+..+++..+|+++||+ |-|+++..+.++..+++++..++...
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------------------- 126 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------------------- 126 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 5789999999999999999999999999999998 99999999999999999999988721
Q ss_pred chHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec-cchhhhhh
Q 023063 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLG 210 (288)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~-~g~~~~f~ 210 (288)
..+.+++.|+++|++.|...+.+..+.+.+.|++ +|+++.+..+.+..+|.+++-.++|++.+. .||+.+|+
T Consensus 127 -~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~------Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY 199 (466)
T KOG2532|consen 127 -GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN------ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFY 199 (466)
T ss_pred -cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHH
Confidence 3346788899999999999999999999999998 699999999999999999999999999988 99999999
Q ss_pred HhHHHHHHHHHHHHHhccceeecCC
Q 023063 211 IPTFAMFLSIIAFLIGYPLYRNLDP 235 (288)
Q Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (288)
+.+++.++..++++....+.+.+++
T Consensus 200 ~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 200 VFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999888877777776655444443
No 89
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.54 E-value=1.4e-13 Score=124.64 Aligned_cols=145 Identities=12% Similarity=0.168 Sum_probs=118.4
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~ 122 (288)
..+...+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.. ...
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~------------ 85 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP------------ 85 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc------------
Confidence 3344456678999999999999999999999999999999998 99999999988877776655 333
Q ss_pred cccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec
Q 023063 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 202 (288)
+.+.+++.+++.|+|.+...+..+.++.|.+++ +|++..+.++.+.++|..+++.+.+.+.+.
T Consensus 86 ----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 86 ----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777889999999988777788888888864 589999999999999999999988887665
Q ss_pred c--chhhhhhHhHHHHHH
Q 023063 203 I--GWGWGLGIPTFAMFL 218 (288)
Q Consensus 203 ~--g~~~~f~~~~~~~~~ 218 (288)
. +|+..|.+.++..++
T Consensus 149 ~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 149 SGGHWQQALAWWALPALL 166 (355)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 4 388887766554433
No 90
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.54 E-value=5.8e-13 Score=120.62 Aligned_cols=153 Identities=13% Similarity=0.122 Sum_probs=113.5
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc----cchhHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 023063 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFWTI-TIASIIYQIGMICLTISAILPQLRPPP 119 (288)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Grr~~i-~~~~~l~~i~~~~~~~~~~~p~~~~~~ 119 (288)
+|.++ +++|++.++.++.... .+...+ .++.|+++||+ +||||.+ +.+.++..+.+..+.+..
T Consensus 11 ~~~~~-~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~--------- 78 (356)
T TIGR00901 11 LPYWL-RSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV--------- 78 (356)
T ss_pred HHHHH-HHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC---------
Confidence 44454 5789999999988655 333333 88999999997 4899975 555666656555554432
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+..+.+.+....++.+++.+...+...++++|.+|++ +|+++.++...+.++|..+++.+++.+
T Consensus 79 ----------~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 79 ----------PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124445555555667777888888899999999877 699999999999999999999999988
Q ss_pred eeccc--------hhhhhhHhHHHHHHHHHHHHH
Q 023063 200 QDNIG--------WGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 200 ~~~~g--------~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+..| |+..|++.++..++..+..+.
T Consensus 143 ~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 143 ASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred hhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 88778 999998888766665544443
No 91
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=7.1e-13 Score=121.53 Aligned_cols=157 Identities=11% Similarity=-0.110 Sum_probs=115.7
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHH-HHHHHH-
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII-YQIGMI- 104 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l-~~i~~~- 104 (288)
+....++...++-...+++|.|++ ++|++..+.+++.+.+.+...+++++.|.++||+ ||++.......+ ..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHH
Confidence 344455555555556678888885 6899999999999999999999999999999998 985433221111 111111
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
....+. +.+.+++.+++.+.+.+...+...++..|. . + +|++.++.....
T Consensus 87 ~~~~~~----------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~------~~~~~~g~~~~~ 136 (382)
T TIGR00902 87 FSAGAH----------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-K------QFGLDYGKVRLI 136 (382)
T ss_pred HHHhhh----------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-H------HcCCCccHHHHH
Confidence 111222 577788888888888888778877776543 2 2 588889999999
Q ss_pred HHHHHHHHHHhHhheeeccchhhhhhHhHHH
Q 023063 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (288)
Q Consensus 185 ~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~ 215 (288)
.++|..++|.+++++.+.+||+..|.+..+.
T Consensus 137 ~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 137 GSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 9999999999999999999999988776554
No 92
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.53 E-value=6.7e-13 Score=137.46 Aligned_cols=155 Identities=12% Similarity=0.053 Sum_probs=121.0
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCH--HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+.+...++..++.++...+....+..++...++.+. ...+++.+++.+...++.+++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 344444455555555554455555566666666543 4468888899999999999999999998 9999999988777
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.++..+... ..+.+.+++.+++.|++.+...+...++++|.+|++ +|+++++
T Consensus 88 ~~~~~~~~~~~~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~ 142 (1146)
T PRK08633 88 VGLTLLIVLAYY-------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE------NLSRANG 142 (1146)
T ss_pred HHHHHHHHHHHH-------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc------cchhhhh
Confidence 666665554331 115678888999999999999999999999999987 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheeec
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~ 202 (288)
+...+.++|.++++.+++++.+.
T Consensus 143 ~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 143 LLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988765
No 93
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.53 E-value=1.5e-12 Score=120.07 Aligned_cols=167 Identities=13% Similarity=0.095 Sum_probs=127.4
Q ss_pred HHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc----cchhH-HHHHHHHHHHHH
Q 023063 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFW-TITIASIIYQIG 102 (288)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Grr~-~i~~~~~l~~i~ 102 (288)
+.+.+.+...+.-...-+|.|+++ .|++..+.+++...... .+..++.|+++||+ +|||| .++++.++..++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 455566666666667789999986 59999999998666654 58899999999997 26765 677777777766
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
...+.+.. ...+.+.+++..++.++..+...+...+++.|.+|++ +|+++.++..
T Consensus 82 ~~~l~~~~-------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~r~~~~~~~~ 136 (402)
T PRK11902 82 IAAMAFCP-------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE------ERGAGAAVKV 136 (402)
T ss_pred HHHHHhcC-------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hhhHHHHHHH
Confidence 66665432 1124555555555667778888889999999999887 6999999999
Q ss_pred HHHHHHHHHHHHhHhheeec-cchhhhhhHhHHHHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~i~ 222 (288)
.+.++|..+++.+.+++.+. .||+..|++.++..++..+.
T Consensus 137 ~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 137 LGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888775 59999998877766554443
No 94
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.53 E-value=7.3e-13 Score=125.22 Aligned_cols=149 Identities=19% Similarity=0.177 Sum_probs=112.8
Q ss_pred hhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 023063 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (288)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~ 119 (288)
....++|.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+.+..+..+..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 3557889999889999999999999999999999999999999998 999998887766555544332221
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+.+.+...+..++.+.......+..++++.|.+|++ +|++.+++++...++|+.++|.+.|++
T Consensus 363 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 363 -----------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE------QRAAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred -----------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH------HhhcccchhhhhhhHHHHHHHHHHHHH
Confidence 113333333333333333334566778889999887 699999999999999999999999999
Q ss_pred eeccchhhhhhHhHHH
Q 023063 200 QDNIGWGWGLGIPTFA 215 (288)
Q Consensus 200 ~~~~g~~~~f~~~~~~ 215 (288)
.+..||+..+.+.+..
T Consensus 426 ~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 426 AQRLDLGTALASLSFS 441 (496)
T ss_pred hccCChHHHHHHHHHH
Confidence 9999988776554443
No 95
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=9.8e-13 Score=119.13 Aligned_cols=180 Identities=13% Similarity=0.042 Sum_probs=127.7
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHH-HHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQ 100 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~-i~~~~~l~~ 100 (288)
+.++...+..++.....+.+..+++.|+++.+|.+..+.+++.....+...++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4566666777777888888888999999999999999999999999999999999999999998 98862 111111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.......... .....+.......+.+.+.+ ..+...+++.|.+|++ .|++..++
T Consensus 294 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFATN---------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGN------IAGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHhc---------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChh------HHHHHHHH
Confidence 22111111110000 00122223232333344444 6788899999999987 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~ 224 (288)
.+...++|..++|.+.+++.+..| |+..|.+.+++.+++.+..+
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888 98888877776666655443
No 96
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.52 E-value=9.6e-13 Score=123.41 Aligned_cols=178 Identities=15% Similarity=0.120 Sum_probs=121.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhcc-chhHHH-HHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYA-GRFWTI-TIASIIY 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~-Grr~~i-~~~~~l~ 99 (288)
+.+|...+..++.....++...++|.|+++++|++..+++.....+.++..++.+++|+++||+. |||+.. .....+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 45666667777777778888899999999889999999998888888888899999999999971 233322 2222333
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+.+.... ..+.+...+...+.+.+..........+..|.+|++ .+++..+
T Consensus 333 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g 386 (452)
T PRK11273 333 TIATIVYWLNP--------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAG 386 (452)
T ss_pred HHHHHHHHHhc--------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh------hhhhHHH
Confidence 33333222211 012233333334444433222233345667899887 6999999
Q ss_pred HHHHHHHHHHHH-HHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 180 WYYFVMGAAILV-AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 180 ~~~~~~~~g~~i-~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
+.+...++|+.+ +|.+.|++.+.+||+..|.+..+..+++++....
T Consensus 387 ~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 387 FTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 998888888765 7999999999999999998877766666554443
No 97
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.51 E-value=3.2e-12 Score=121.22 Aligned_cols=178 Identities=13% Similarity=0.103 Sum_probs=135.8
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc----cchhHH-HHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFWT-ITI 94 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Grr~~-i~~ 94 (288)
.+|+.+.++.+.+......+.....++.|+.+ .|.+..+.+....+... .++.++.|+++||+ +||||. ++.
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 45567777778888888888888888989865 59999998886322222 36889999999995 288886 556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhh
Q 023063 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (288)
Q Consensus 95 ~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (288)
+.+...++...++... ...+.+.+.+.+++.+++.+...+...++..|.+|++ +|
T Consensus 87 ~~i~~~~~~~~~a~~~-------------------~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~------~r 141 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE-------------------PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE------ER 141 (491)
T ss_pred HHHHHHHHHHHHHHcC-------------------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hh
Confidence 6666666666655432 1125667777788889988888899999999999977 69
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHhheee-ccchhhhhhHhHHHHHHHHHHHHH
Q 023063 175 WKYFNWYYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 175 ~~~~~~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
++..++...+..+|..+++.+.+++.+ ..||+..|++.+++.++..+..+.
T Consensus 142 g~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 142 GAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988887 469999999887766555444333
No 98
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.51 E-value=8e-13 Score=130.00 Aligned_cols=133 Identities=11% Similarity=0.012 Sum_probs=103.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHH
Q 023063 63 TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLL 142 (288)
Q Consensus 63 ~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (288)
...+..++..++.+++|+++||+ |||+++++++++..++.+++.+.. +...+++.++
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~----------------------s~~~ll~~~~ 656 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN----------------------SESAMIALLC 656 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc----------------------cHHHHHHHHH
Confidence 34555678889999999999998 999999999988888887776554 3344555556
Q ss_pred HHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHH
Q 023063 143 LAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 143 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~ 222 (288)
+.+++.++..+...++++|.+|++ .|++++++.+....+|++++|.+++.+.+. +...+|++.+++.+++.++
T Consensus 657 l~g~~~~~~~~~~~a~~aEl~Pt~------~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll 729 (742)
T TIGR01299 657 LFGGLSIAAWNALDVLTVELYPSD------KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence 667766777788899999999998 799999999999999999999999877553 3455666666655555444
Q ss_pred HHH
Q 023063 223 FLI 225 (288)
Q Consensus 223 ~~~ 225 (288)
..+
T Consensus 730 ~~~ 732 (742)
T TIGR01299 730 ALK 732 (742)
T ss_pred HHh
Confidence 443
No 99
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.51 E-value=1.5e-12 Score=135.09 Aligned_cols=137 Identities=13% Similarity=0.020 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH--HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHH
Q 023063 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI--IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVA 135 (288)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~--l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 135 (288)
...++..+++.+...++++++|+++||+ |||+++..... +...+........ .+++
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~---------------------~s~~ 109 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL---------------------NSVP 109 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hhHH
Confidence 4467777888899999999999999998 99997643222 2222222222111 1678
Q ss_pred HHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHH
Q 023063 136 ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (288)
Q Consensus 136 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~ 215 (288)
.+++.++++|++.+...+...+++.|.++++ +++++.++.+.+.++|.+++|.++|++....||+..|.+.+++
T Consensus 110 ~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~ 183 (1140)
T PRK06814 110 LLFAALFLMGIHSALFGPIKYSILPDHLNKD------ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGI 183 (1140)
T ss_pred HHHHHHHHHHHHHHhhchHHHHhhHhhcCcc------ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 8899999999999999999999999999987 6999999999999999999999999999888999888444444
Q ss_pred HHHHHHH
Q 023063 216 MFLSIIA 222 (288)
Q Consensus 216 ~~~~~i~ 222 (288)
.+++++.
T Consensus 184 ~~~~~~~ 190 (1140)
T PRK06814 184 AVLGWLA 190 (1140)
T ss_pred HHHHHHH
Confidence 4443333
No 100
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.50 E-value=5.2e-13 Score=124.09 Aligned_cols=174 Identities=14% Similarity=0.145 Sum_probs=125.6
Q ss_pred HHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchhH-HHHHHHHHHHHHHHHHH
Q 023063 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFW-TITIASIIYQIGMICLT 107 (288)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~-~i~~~~~l~~i~~~~~~ 107 (288)
+..+..+..+.++++.|+++++|+++.+++++.++..+...+..|+.|+++||. +|||| .++.+.....++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 444555666678899999999999999999999999999999999999999983 38755 56677777777766665
Q ss_pred HHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHH
Q 023063 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (288)
Q Consensus 108 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (288)
... ... .......+.+..++.+++.+.......++.+|..++.+ +|++..++.+.+.++
T Consensus 89 ~~~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~~ 147 (437)
T TIGR00792 89 TTP---DFS-------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGATL 147 (437)
T ss_pred hCC---CCC-------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHHH
Confidence 432 110 11134455566677788888887788888888875433 789999988888888
Q ss_pred HHHHHHHhHhhee-------eccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 188 AILVAVTVLVYIQ-------DNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 188 g~~i~~~~~~~l~-------~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
|+.+++.+.+.+. +..||+..+.+.+++.++..+.....
T Consensus 148 g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 148 GGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG 193 (437)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 8877766554332 24578888877776665554444333
No 101
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.50 E-value=1.7e-12 Score=123.68 Aligned_cols=154 Identities=16% Similarity=0.235 Sum_probs=125.3
Q ss_pred hhhhhHHHHhHHhc-----CCCH--HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 023063 40 GFNTNMISYLTTQL-----HMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (288)
Q Consensus 40 ~~~~~l~~yl~~~~-----~~~~--~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~ 112 (288)
+..+....++++.. ..+. .+.+++.+...++..++.++.|.++|++ |||++++++.+++.+|.+++..+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 45555555555422 1222 3458999999999999999999999998 999999999999999999999988
Q ss_pred CCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 023063 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (288)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 192 (288)
+...+.++|++.|+|.|+.....+.|++|..|++ .||...+..++...+|..++
T Consensus 141 --------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~------~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 141 --------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAH------IRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred --------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChh------hhHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999998 69999999999999999999
Q ss_pred HHhHhheeec-cchhhhhhHhHHHHHHHHHH
Q 023063 193 VTVLVYIQDN-IGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 193 ~~~~~~l~~~-~g~~~~f~~~~~~~~~~~i~ 222 (288)
..++....+. .+||..+.+..+..++..+.
T Consensus 195 ~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 195 YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 6555444332 48997776665555444444
No 102
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.50 E-value=2.2e-12 Score=118.87 Aligned_cols=165 Identities=10% Similarity=-0.045 Sum_probs=124.0
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~ 108 (288)
...++....++....++|.|+.+ .|++..+.+.+.....++..++.++.|+++||+ |||+.+..+.+...++.+....
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 34444455666777788988875 799999999999999999999999999999998 9999988766655555444433
Q ss_pred HhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 023063 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (288)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (288)
.. +.+.+.+..++.+++.+...+...++..|.+|++ +|++..++.+....+|
T Consensus 305 ~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g 356 (406)
T PRK11551 305 AP----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ------VRGTGVGAAVAVGRLG 356 (406)
T ss_pred cC----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh------hhhhhhhHHHHhhhHH
Confidence 22 3344455556677777777788888999999987 6999999999999999
Q ss_pred HHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHH
Q 023063 189 ILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 189 ~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~ 223 (288)
..++|.+.|++.++.+ |...+++...+.+++.+..
T Consensus 357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999887654 4445555544444444333
No 103
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.50 E-value=6.2e-14 Score=128.31 Aligned_cols=153 Identities=44% Similarity=0.828 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh
Q 023063 89 FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP 168 (288)
Q Consensus 89 r~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 168 (288)
+|+++++.+++.+|.+++.++. .|... +++...+.+++++.+.++|.|+..+++.++++||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~-~~~~~------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~- 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSA-IPPSL------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD- 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-TSSSC------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-
T ss_pred CHhhhHHHHHHHHHHHHhHHHH-hcchh------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc-
Confidence 4899999999999999988887 33322 123356789999999999999999999999999999874
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccceeec-CCCCChhhH-HHHH
Q 023063 169 KQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNL-DPAGSPFTR-LLQV 246 (288)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~-~~~~ 246 (288)
+++|.++++++|++.|+|+.+++.+.+++++++||...|.++.+..+++++.++..+++++.+ ++.+++..+ ...+
T Consensus 67 --~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~ 144 (372)
T PF00854_consen 67 --DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLV 144 (372)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHH
T ss_pred --hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHH
Confidence 237999999999999999999999999999999999999999999999999999998888776 666666665 4444
Q ss_pred HHHHHHhCccc
Q 023063 247 CVAAFRKRKLT 257 (288)
Q Consensus 247 ~~~~~~~~~~~ 257 (288)
+....+++...
T Consensus 145 ~~~~~~~~~~~ 155 (372)
T PF00854_consen 145 LVAAFKKRKLA 155 (372)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHhhcc
Confidence 44555554443
No 104
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=4.3e-12 Score=116.54 Aligned_cols=174 Identities=10% Similarity=0.011 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
++......++.....++...+++.|+.+..|++..+++++.....++..++.++.|+++||+ |||+.+ .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 33344445555556666667788898888899999999999999999999999999999998 987654 4444444443
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
....... .+.+.+.+..++.|++.+...+...+.+.|..|+ .++++++.++.
T Consensus 285 ~~l~~~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~ 336 (390)
T PRK03545 285 LLLLPAA---------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-------ATDVAMALFSG 336 (390)
T ss_pred HHHHHHh---------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-------cHHHHHHHHHH
Confidence 3322211 1445566666777888777666677777777664 48889999988
Q ss_pred HHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 184 ~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
..++|..+||.++|++.+++|++..|.+.+++.+++++......
T Consensus 337 ~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 337 IFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999888888877776655544
No 105
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.49 E-value=1.2e-12 Score=121.63 Aligned_cols=177 Identities=9% Similarity=0.015 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHhHHhhhhhHHHHhHHhcCCC--------HHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMP--------LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
..++..++..........+++.|+.+ .|.+ ..+.+...++..+...++.++.|+++||+ |||+++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34444444444444445667788764 4433 46678888888888999999999999998 99999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..++..+...... +....+.+++..++.+++.+...+....+++|.+|++ .|++.
T Consensus 290 ~~~v~~~l~~~~~~------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~------~~g~~ 345 (418)
T TIGR00889 290 AWALRFGFFAYGDP------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH------IRASA 345 (418)
T ss_pred HHHHHHHHHHHcCc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHH
Confidence 88877666554220 0112345666778888888888888889999999987 69999
Q ss_pred HHHHH-HHHHHHHHHHHHhHhheeec------cchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 178 FNWYY-FVMGAAILVAVTVLVYIQDN------IGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 178 ~~~~~-~~~~~g~~i~~~~~~~l~~~------~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+++.+ ....+|..++|.++|++.++ +||+..|.+.+++.+++.+.+....+
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 56789999999999998876 46898998887777666665555443
No 106
>PTZ00207 hypothetical protein; Provisional
Probab=99.49 E-value=4.7e-12 Score=121.32 Aligned_cols=160 Identities=13% Similarity=0.039 Sum_probs=120.1
Q ss_pred HHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 023063 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (288)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~ 117 (288)
.|++.. ....+++++|++..+.+++.+.... ..++.+++|+++||+ |+|++++++.++..+++++++++.. . .
T Consensus 43 ~y~fsv-~s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~-~-~-- 115 (591)
T PTZ00207 43 MYAFNL-ISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQ-E-V-- 115 (591)
T ss_pred HHHHHH-HHHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhc-c-c--
Confidence 344433 4456788999999999988876443 345677789999998 9999999999999999999988630 0 0
Q ss_pred CCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHH-HHHhH
Q 023063 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV-AVTVL 196 (288)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i-~~~~~ 196 (288)
-..+.+.+++.+++.|+|.+...+.....+.++||+ +||.+.++...+.++|+.+ +++..
T Consensus 116 ------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a~Gi~~~~~gLGsaI~~~l~~ 176 (591)
T PTZ00207 116 ------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAVVAIMKTFTGLGSAILGSIQL 176 (591)
T ss_pred ------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012678888999999999998888888889999985 5999999999999999986 55545
Q ss_pred hheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 197 VYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 197 ~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
+++. .+|+..|++.+++.++..+..+.
T Consensus 177 ~l~~--~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 177 AFFS--DNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHH--HhHHHHHHHHHHHHHHHHHHHHh
Confidence 5544 35666666666655554444333
No 107
>PRK12382 putative transporter; Provisional
Probab=99.48 E-value=1.4e-12 Score=119.66 Aligned_cols=161 Identities=16% Similarity=0.178 Sum_probs=125.9
Q ss_pred HHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 023063 33 CEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (288)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~ 112 (288)
+....+..+..+.+.|+++ .|++. .+.....+.++..++.++.|++.||+ |+|+.+..+..+..++.++.....
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~-- 300 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP-- 300 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc--
Confidence 3445555666777888864 46654 44555566677788899999999998 999999988888887776655433
Q ss_pred CCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 023063 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (288)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 192 (288)
+.+.+.+..++.+++.+...+...+.+.|.+|++ +|++..++++....+|..++
T Consensus 301 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 301 --------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ------VRGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred --------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHH
Confidence 3455566777888888887787788888888876 69999999999999999999
Q ss_pred HHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 193 VTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 193 ~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
|.+.+++.+++||+..|.+.+++.+++.+..+.
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998888777776665543
No 108
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.48 E-value=3e-12 Score=117.71 Aligned_cols=163 Identities=11% Similarity=0.018 Sum_probs=123.3
Q ss_pred HHHhHHhhhhhHHHHhHHhcCCCHH---HHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 34 EKLAVVGFNTNMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
.......+.+.++.|+.+..+.... ..+.+..+..++..++.++.|+++||+ |||+.+..+..+..++.+......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFVQ 309 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHhc
Confidence 3344444556677888765443221 234455566677778889999999998 999999988877766665554433
Q ss_pred hcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 023063 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL 190 (288)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 190 (288)
+.+.+.+..++.|++.+...+...+++.+..+++ ++++.++.++...++|..
T Consensus 310 ----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~ 361 (408)
T PRK09874 310 ----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDIGNV 361 (408)
T ss_pred ----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHHHHH
Confidence 4555667777889999988888888888887776 689999999999999999
Q ss_pred HHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 191 VAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 191 i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
++|.++|.+.+..||+..|.+.+++.+++.+....
T Consensus 362 ~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 362 TGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888877776655544
No 109
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.47 E-value=2.8e-12 Score=117.54 Aligned_cols=156 Identities=12% Similarity=-0.030 Sum_probs=115.0
Q ss_pred HHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHH
Q 023063 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF----WTITIASIIYQIGMICL 106 (288)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr----~~i~~~~~l~~i~~~~~ 106 (288)
.++...++..+.+++|.|++ ++|.+..+++++.+.+.+...++.+++|.++||+ ||+ +.+.+...+. .+..
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHHH
Confidence 34444555566778889995 5799999999999999999999999999999998 984 2222222111 1111
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
... ..+.+.+++.+.+.+++.+...+...++..+. .+ +|++.++......+
T Consensus 88 ~~~---------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~-------~~~~a~~~~~~~~~ 138 (382)
T PRK11128 88 WFG---------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QK-------QIGLDYGKVRLWGS 138 (382)
T ss_pred HHh---------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH-Hh-------hccCCcchHHHHHH
Confidence 111 11577777888888998888888877777765 22 46777777778889
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
+|..++|.+++++.+++||+..|++.++..++..
T Consensus 139 lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 139 IAFVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 9999999999999999999999887765544443
No 110
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=4.7e-12 Score=115.98 Aligned_cols=155 Identities=12% Similarity=0.157 Sum_probs=117.8
Q ss_pred HhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 023063 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (288)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~ 115 (288)
..+.....++|.|+++ .|.++.+.+...+...++..++.++.|+++||+ |+|+.+..+..+..++.+... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~--~----- 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML--S----- 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh--h-----
Confidence 3344445678888875 699999999988888899999999999999998 999999888877777655432 1
Q ss_pred CCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 023063 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (288)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 195 (288)
.. .......+.+++.+...+...+.+.|..|++ +++...+.++...++|..++|.+
T Consensus 285 -----------------~~-~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~igp~~ 340 (381)
T PRK03633 285 -----------------QA-AMAPALFILGAAGFTLYPVAMAWACEKVEHH------ELVAMNQALLLSYTVGSLLGPSF 340 (381)
T ss_pred -----------------hH-HHHHHHHHHHHHHHhHHHHHHHHHHccCCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1223445556666666788888888888775 46677777788899999999999
Q ss_pred HhheeeccchhhhhhHhHHHHHHHHHHH
Q 023063 196 LVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 196 ~~~l~~~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
.|++.+++|++..|.+.+.+.++..+..
T Consensus 341 ~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 341 TAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 9999999999988888777665554433
No 111
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.47 E-value=7.7e-13 Score=122.71 Aligned_cols=163 Identities=12% Similarity=0.048 Sum_probs=124.6
Q ss_pred HHHhHHhhhhhHHHHhHHhc---CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 34 EKLAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
....+......++.|+.+.+ +.+..+.+.+.++..+...++.+++|+++||+ |||+.+..+.++..++.++..+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~ 313 (420)
T PRK09528 235 VACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc
Confidence 33344444456777776543 56667788888888888889999999999998 999999988888888777766544
Q ss_pred hcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH-HHHHHHHHH
Q 023063 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW-YYFVMGAAI 189 (288)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~ 189 (288)
+++.+++..++.+++.+...+....++.|.+|++ .++...+. ++....+|.
T Consensus 314 ----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 314 ----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR------LSATIYLVGFQFAKQLGA 365 (420)
T ss_pred ----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------ceeeeeeehHHHHHHHHH
Confidence 4566667777888887777777778889999876 46666554 667788999
Q ss_pred HHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 190 LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 190 ~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+++.+.|++.+..||+..|.+.+++.++..++...
T Consensus 366 ~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 366 VFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998877766555544433
No 112
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.47 E-value=2.1e-12 Score=122.00 Aligned_cols=176 Identities=7% Similarity=0.025 Sum_probs=113.5
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhH-----HHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-----TITIASI 97 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-----~i~~~~~ 97 (288)
..|.+.+..++.....+.+..++|.|+.+++|++..+++.......++..++.+++|+++||+ |||+ .......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 344444444444455566677889999888999999999999999999999999999999998 8762 2221111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
....+.....+.. ..+.+...+..++.+++.+...+...++..+..|+ .++..
T Consensus 332 ~~l~~i~~~~~~~--------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~g~~ 384 (476)
T PLN00028 332 QTLGGVFCIWLGR--------------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRR-------SLGVI 384 (476)
T ss_pred HHHHHHHHHHhcc--------------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccChh-------hchhh
Confidence 1111111111111 01233334444455555544445555556665443 58889
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
.++.+.+.++|+.+++.+.+ ..+..+|+..|++.+++.+++.+..++.+
T Consensus 385 ~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 385 SGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 99888888888888887654 22344688999888887777776666654
No 113
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.47 E-value=1.4e-12 Score=119.20 Aligned_cols=155 Identities=15% Similarity=0.114 Sum_probs=119.4
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~ 108 (288)
....+.+...+....+++.|+.+++|++..+.+++.....++..++.++.|+++||+ |||+.+.++..+..+..+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 323 (405)
T TIGR00891 245 VLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFA 323 (405)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHH
Confidence 334444555566677889999989999999999999999999999999999999998 9999988877654333222221
Q ss_pred HhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 023063 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (288)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (288)
.. .+.+.+.+...+.++..+...+..++++.|.+|++ +|++.++..+...++|
T Consensus 324 ~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~g 376 (405)
T TIGR00891 324 IG---------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD------QRAAGLGFTYQLGNLG 376 (405)
T ss_pred hC---------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc------hhHHHhhHHHHHHHHH
Confidence 11 13344555555666666667778888999999987 6999999999999999
Q ss_pred HHHHHHhHhheeeccc-hhhhhhH
Q 023063 189 ILVAVTVLVYIQDNIG-WGWGLGI 211 (288)
Q Consensus 189 ~~i~~~~~~~l~~~~g-~~~~f~~ 211 (288)
..++|.+.|++.+..| |+..+..
T Consensus 377 ~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 377 GALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999888 7655543
No 114
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.47 E-value=2.3e-12 Score=119.35 Aligned_cols=160 Identities=7% Similarity=-0.060 Sum_probs=127.0
Q ss_pred HHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 023063 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (288)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~ 117 (288)
..++..++|.|+++.+|.++.+.+++.+...++..++.++.|+++||. ++++.+..+.++..++.+++....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 345667789999888999999999999999999999999999999997 888888888777777666554433
Q ss_pred CCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
+.+...+..++.|++.+...+...+++.|..|++ .|++..++++...++|..++|.+.|
T Consensus 311 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 311 ---------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE------MLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH------HHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 4455556667778877776677778889999876 6999999999999999999999999
Q ss_pred heeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 198 YIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 198 ~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
++.+.+|++..+...++..++..++....
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 99998898877776666555544444443
No 115
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.47 E-value=1.1e-12 Score=118.39 Aligned_cols=186 Identities=13% Similarity=0.055 Sum_probs=148.5
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
.+.+|.+.+..+..--++.++..+++.|++++++.++.+++.+...+...+.+..+++|+|+||+ |.+|+++.....+.
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 46778888888888888888999999999999999999999999999999999999999999998 88888888887777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.....+.. +... ...+....+...+..++..|.-+..+..++...+++ +.|...++
T Consensus 296 ~~~~~l~~~~--~~~~-------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-------~~G~v~G~ 353 (417)
T COG2223 296 LAAALLSLFL--TGFG-------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-------ETGAVTGI 353 (417)
T ss_pred HHHHHHHccc--cccc-------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-------hhhHHHHH
Confidence 7776666533 1100 012445555556666777777777788888888887 48888999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHhccc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
.....++|++.-|...+...+.+| ++..|++...+.+++.+..+....+
T Consensus 354 vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 354 VGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998888888 7888888888887777766665443
No 116
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.46 E-value=4.3e-12 Score=118.41 Aligned_cols=178 Identities=11% Similarity=-0.027 Sum_probs=119.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccch--hHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR--FWTITIASIIYQ 100 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr--r~~i~~~~~l~~ 100 (288)
.++.+.+..++....++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.++ ++......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 455555556666666777788999999888999999999999999999999999999999997322 232222111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
+....+.... . . +.....+..+..|++............+|.+|++ +|++..++
T Consensus 324 ~~~~~~~~~~---~----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~ 377 (434)
T PRK11663 324 LSVGSLWLMP---F----------------A-SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKE------AAGAATGF 377 (434)
T ss_pred HHHHHHHHcc---c----------------c-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHh------hHHhHHHH
Confidence 1111111111 0 0 1222222223333332222223345678888776 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.+...++|+.++|.+.+++.+.+||+..|.+.+++.+++.+..+..
T Consensus 378 ~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 378 VGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988877776665544443
No 117
>PRK15075 citrate-proton symporter; Provisional
Probab=99.46 E-value=3.1e-12 Score=119.30 Aligned_cols=152 Identities=11% Similarity=0.018 Sum_probs=106.6
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-HH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC-LT 107 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~-~~ 107 (288)
...++....++.+..+.|.|+++.+|++..++++......++..++.+++|+++||+ |||+.+..+..+..+..++ ..
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH
Confidence 334445667778888999999988999999998888888888899999999999998 9999887765443322221 11
Q ss_pred HHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH-HHH
Q 023063 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMG 186 (288)
Q Consensus 108 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (288)
... .........+..++.+++.+...+...++..|.+|++ .|+..+++.+. +..
T Consensus 324 ~~~-------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~------~rg~~~g~~~~~~~~ 378 (434)
T PRK15075 324 WLV-------------------AAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE------VRTAGFSLAYSLATA 378 (434)
T ss_pred HHH-------------------cCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC------ccchheeHHHHHHHH
Confidence 111 0012222223334445556666666678889999988 68888887544 444
Q ss_pred HHHHHHHHhHhheeeccchh
Q 023063 187 AAILVAVTVLVYIQDNIGWG 206 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~ 206 (288)
+++.++|.+.+++.+..|+.
T Consensus 379 ~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 379 IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHhhhHHHHHHHHHHhcCCc
Confidence 56788999999998887753
No 118
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=7.4e-12 Score=115.59 Aligned_cols=177 Identities=13% Similarity=0.050 Sum_probs=127.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHH-HHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT-IASIIYQ 100 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~-~~~~l~~ 100 (288)
+.++...+..++....+++...+.|.|++ ++|++..+.+.+.....++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 44566666677778888888899999986 4899999999888888899999999999999998 9888764 2333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+.+.... .. ...+.+...+..++.|++.+...+ ..+.+.|..|+ +|++.+++
T Consensus 300 ~~~~~l~~~~---~~--------------~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-------~~g~~~g~ 354 (402)
T TIGR00897 300 IFTLALYYIP---QH--------------FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-------HKGAAMSV 354 (402)
T ss_pred HHHHHHHHHH---Hc--------------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-------hhHHHHHH
Confidence 3332222211 00 011344455556667777666544 34556665443 59999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+...++|+.++|.+.+.+.+..|+...|++.+++.+++.+...+
T Consensus 355 ~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 355 LNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999899998888887777666555444
No 119
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.45 E-value=1.5e-12 Score=124.31 Aligned_cols=140 Identities=14% Similarity=0.066 Sum_probs=124.2
Q ss_pred HhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 023063 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (288)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 130 (288)
+..+.+.....+..+++.++..++++++|.++||+ |||++++.+.++..++.++.+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 45667888888999999999999999999999996 999999999999999999888877
Q ss_pred cchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhh
Q 023063 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG 210 (288)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~ 210 (288)
+++.+.+.|++.|++.++...+...+++|.++++ .|+.+... ......++.+++.+++++.+ +||+.++
T Consensus 170 --~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~------~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~ 238 (521)
T KOG0255|consen 170 --NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK------QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFW 238 (521)
T ss_pred --cHHHHHHHHHHHHhhccchhHHhHhhheeecCcc------hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 8899999999999999999999999999999998 69888888 77778888889988888877 8999888
Q ss_pred HhHHHHHHHHHH
Q 023063 211 IPTFAMFLSIIA 222 (288)
Q Consensus 211 ~~~~~~~~~~i~ 222 (288)
+..+..++.++.
T Consensus 239 ~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 239 IISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHH
Confidence 877766655544
No 120
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.45 E-value=4.8e-12 Score=117.95 Aligned_cols=169 Identities=15% Similarity=0.020 Sum_probs=108.3
Q ss_pred HHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
.++....+|++..++|.|+.+.+|++..+.+...++..+...++.++.|+++||+ |||+.+.++.++..+..+......
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677888899999999988999999988888888888888899999999998 999988776654433332222111
Q ss_pred hcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH-HHH
Q 023063 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG-AAI 189 (288)
Q Consensus 111 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 189 (288)
+ ...+.........+..++.+...+...++.+|.+|++ .|+.+.++.+...+ +++
T Consensus 331 --~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~------~r~t~~g~~~~~g~~~~g 386 (432)
T PRK10406 331 --Q----------------NVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ------VRALGVGLSYAVANALFG 386 (432)
T ss_pred --H----------------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------ccchhhhHHHHHHHHHHH
Confidence 0 0001221111112222233333445678889999998 69999998776544 334
Q ss_pred HHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHH
Q 023063 190 LVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 190 ~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~ 225 (288)
...|.+.+.+. ..| |...+++.++..+++++..++
T Consensus 387 ~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 387 GSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred hHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 45777777654 345 555555555555555444443
No 121
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=7e-12 Score=117.78 Aligned_cols=174 Identities=10% Similarity=0.024 Sum_probs=132.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc-cchhHHHHHHHHHH-
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY-AGRFWTITIASIIY- 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~-~Grr~~i~~~~~l~- 99 (288)
+.++..+...++..++++....+++.|+++ +|++..+++++.+...++..++.+++|+++||. +++|+..+++..+.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 345555566667777778888889999865 799999999999999999999999999999984 24444444333222
Q ss_pred -HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 100 -QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 100 -~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
.++.++..... +.+.+++..++.|++.+...+...+++.|.+|++ ++++.+
T Consensus 320 ~~l~~ll~~~~~----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~------~~g~~~ 371 (455)
T TIGR00892 320 NGLTHLLCALAG----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ------RFSSAV 371 (455)
T ss_pred HHHHHHHHHHhc----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH------HHhhHH
Confidence 23233332222 4566677788889999998899999999999876 699999
Q ss_pred HHHHHHHHHHHHHHHHhHhheeecc-chhhhhhHhHHHHHHHHHHHH
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNI-GWGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~i~~~ 224 (288)
+.++...++|..++|.+.|.+.+.. +|+..|++.+++.+++.+...
T Consensus 372 g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 372 GLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred hHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 9999999999999999999998877 498889888877666554433
No 122
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.45 E-value=1e-11 Score=113.83 Aligned_cols=169 Identities=8% Similarity=-0.042 Sum_probs=140.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++..+...++...+.....++.+.|+++ .|.++.+.+.......+...+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 456666667777777788888899999975 899999999998888888889999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
..+...... +.+.+++..++.++..+...+....++.+. |++ .++...+.+
T Consensus 283 ~~~~~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~------~~~~~q~~~ 333 (382)
T TIGR00902 283 RWAIIGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS------EIAKLQALY 333 (382)
T ss_pred HHHHHHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh------hHHHHHHHH
Confidence 888777655 667777788899999999999999999987 765 578888887
Q ss_pred H-HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHH
Q 023063 182 Y-FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 182 ~-~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~ 222 (288)
+ ....+|..+++.++|++.+++|+ ..|++.+++.+++++.
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 6 46789999999999999999886 5677666666555443
No 123
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.44 E-value=7.2e-12 Score=117.60 Aligned_cols=196 Identities=13% Similarity=0.098 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHh----ccchhHHHHHH-HH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADA----YAGRFWTITIA-SI 97 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr----~~Grr~~i~~~-~~ 97 (288)
++..+....+...+++-...++++.|+ +++|.+....+++..+..+...+.+|+.|+++|| + ||||.++++ ..
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 344455566666777777777788887 4699999999999999999999999999999995 6 999988875 55
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
...++.+++..+..+...... ..-........+...++..+..++.....+...++++|.+|++++ +++.+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~-----~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a 153 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGD-----NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RTRIA 153 (477)
T ss_pred HHHHHHHHHHhCchhhhhccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HHHHH
Confidence 555555555543311100000 000000000113344445556677777888889999999998741 23678
Q ss_pred HHHHHHHHHHHHHHHHHhHhhe--eecc-------------chhhhhhHhHHHHHHHHHHHHHhccc
Q 023063 178 FNWYYFVMGAAILVAVTVLVYI--QDNI-------------GWGWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l--~~~~-------------g~~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
.++.+...++|+.+++.++++. ...+ +.+..|++.+++.++..++..+..++
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 8899999999999999988754 1111 45677888777776666555554444
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.44 E-value=6.7e-13 Score=102.76 Aligned_cols=131 Identities=11% Similarity=0.178 Sum_probs=109.0
Q ss_pred HHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHH
Q 023063 66 NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAA 145 (288)
Q Consensus 66 ~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 145 (288)
...++..++.++.|+++||+ |||+.+..+..+..++.+...... +.+.+.+.+++.+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g 62 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS----------------------NITVLIIARFLQG 62 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHH
Confidence 34567778899999999998 999999999888888877666544 5666777788899
Q ss_pred HhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 146 LGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 146 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
++.+...+...++..|.+|++ +|++..+..+....+|..+++.+.+.+.+..+|+..|.+..+..++..+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPPE------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHhHHHHHHHHCChh------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 999888889999999999987 69999999999999999999999999988889988888777666555554444
No 125
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.41 E-value=2.4e-11 Score=115.25 Aligned_cols=180 Identities=12% Similarity=0.035 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHH-HHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT-NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.+.++...++...+.+....+.+.|+.+++|++..+.+.+.. ...++..++.+++|+++||+ |+|+.+.++.++..++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344444445555565566677888988889999999999874 55678899999999999998 9998877766555554
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+....... .+.+.+.+.+..++..+..|...+...++..+..+++ ..++.++..+
T Consensus 303 ~l~~~~l~~------------------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~------~~~t~~gl~~ 358 (491)
T PRK11010 303 NAGYWLLSI------------------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKS------FSATQFALLS 358 (491)
T ss_pred HHHHHHHHh------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------CcHHHHHHHH
Confidence 433332110 0112333334444444444444456678888888887 4777888888
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
...++|..+++.+.|++.+.+||+..|.+..++.+.+++.....++
T Consensus 359 s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 359 ALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999989889999999999999998888888777766665543
No 126
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=8.1e-12 Score=113.46 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=111.0
Q ss_pred HHHHhHHhcC--CCHHHHHHHHHHH-----HHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 023063 45 MISYLTTQLH--MPLTKAANTLTNF-----GGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (288)
Q Consensus 45 l~~yl~~~~~--~~~~~~~~~~~~~-----~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~ 117 (288)
...++.++.. .++++.+.+.+.. .+...++.++.|+++||+ |||+++..+.++..++.+++.+...++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-- 91 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI-- 91 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh--
Confidence 4445554433 3445554443322 223346789999999998 99999999999999998888765411100
Q ss_pred CCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
.......+++.|+++|++.+...+...++++|.++++ +|+...+..+.+..+|..+++.+..
T Consensus 92 ------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 92 ------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG------KRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc------cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001235778899999999999999999999999887 6999999999999999999988765
Q ss_pred hee--------eccchhhhhhHhHHHHHHHH
Q 023063 198 YIQ--------DNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 198 ~l~--------~~~g~~~~f~~~~~~~~~~~ 220 (288)
.+. +..+|+..|.+.++..++..
T Consensus 154 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 154 LLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 542 35689988887666554443
No 127
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.41 E-value=2.1e-11 Score=114.79 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=150.0
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchh--HHHHHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF--WTITIASII 98 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr--~~i~~~~~l 98 (288)
.|.+..-++..++.+-+...+......|.++++|++..+...+..+..+.+.++..++|++.||+ |.| ++++++.++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 35666667788888888889999999999999999999999999999999999999999999998 988 888887766
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
+.+..+.-.+.. .+... ...+.+.+++.-++.|+..|...+..-++.+|..|++ +.+.++
T Consensus 359 ~~~i~~~g~~G~-~~~~~-------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g------~e~efF 418 (477)
T PF11700_consen 359 WIIIPLYGLFGF-WPSFF-------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPG------REAEFF 418 (477)
T ss_pred HHHHHHHHHHHh-hhccc-------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCc------hhhHHH
Confidence 644333322211 11100 0115566777778899999999999999999999998 689999
Q ss_pred HHHHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHh
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+.+.+.....+.+||.+.+.+.+.+| .|.++....++.+++++++...
T Consensus 419 gly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 419 GLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999988887 7888888888777777776554
No 128
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=1.6e-11 Score=115.53 Aligned_cols=157 Identities=10% Similarity=0.044 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.+...+...++...++.......|.|++..+|.++.+.++......+...++.++.|+++||+ |||+++..+..+..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 444555566666666655566788888888999999999988888888888889999999998 9999999888877777
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+++.... .....+.+.+..++.|++.+...+....+..+..|++ .++..+++.+
T Consensus 341 ~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~ 395 (471)
T PRK10504 341 SLLFMLVA-------------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN------LASSGNSLLS 395 (471)
T ss_pred HHHHHhcc-------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH------hccchHHHHH
Confidence 66555422 0112333344556677888877788888888888876 6999999999
Q ss_pred HHHHHHHHHHHHhHhheeeccch
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
....+|..+++.+.+.+.+..|+
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999998877665554
No 129
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.40 E-value=1.4e-11 Score=114.67 Aligned_cols=166 Identities=13% Similarity=0.022 Sum_probs=115.2
Q ss_pred hhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 023063 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (288)
Q Consensus 41 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~ 120 (288)
+..+.+.+ .+++|++..+.+.......++..++.+++|+++||+ |||+.+.++.++..++.+++..........
T Consensus 303 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 376 (481)
T TIGR00879 303 IMYYSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVTG---- 376 (481)
T ss_pred hHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccCC----
Confidence 33444444 456899998888888888899999999999999998 999999988887777776665322100000
Q ss_pred CCcccccccccchHHHHHHHH-HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 121 EGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
.........+.... +..+.+. ...+....++.|.+|++ .|+...+..+...++|+.++|.+.+.+
T Consensus 377 -------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~------~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 377 -------SSKSSGNVAIVFILLFIAFFAM-GWGPVPWVIVSEIFPLS------LRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred -------cccchhHHHHHHHHHHHHHHHc-cccCeehhhhhccCChH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000112222222 2222232 23456667789999987 699999999999999999999999998
Q ss_pred eeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 200 QDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 200 ~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.++.+|+..|++.+++.+++.+...+.
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHhee
Confidence 888899988888877766665554443
No 130
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=3.8e-11 Score=107.93 Aligned_cols=135 Identities=14% Similarity=0.109 Sum_probs=117.3
Q ss_pred hhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 023063 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (288)
Q Consensus 41 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~ 120 (288)
....+...+++.++.+..+++++...+..++.++.+..|++.+|+ |+|+.+++|+.++.+|..+++-++
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa---------- 99 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAA---------- 99 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhh----------
Confidence 345677888999999999999999999999999999999999998 999999999999999999887554
Q ss_pred CCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
....+..++.+.++.+.|.+...+..+++++...+++ .-..-.+..+....+|+.++|.+++++.
T Consensus 100 ---------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~------~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 100 ---------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPE------SAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred ---------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch------hHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 2236778888899999999999999999999999886 3445567777888999999999998765
Q ss_pred e
Q 023063 201 D 201 (288)
Q Consensus 201 ~ 201 (288)
.
T Consensus 165 l 165 (422)
T COG0738 165 L 165 (422)
T ss_pred H
Confidence 5
No 131
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.39 E-value=1.5e-11 Score=117.45 Aligned_cols=154 Identities=11% Similarity=0.152 Sum_probs=118.2
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~ 122 (288)
.....+...++|-+ .+..|+.+...+...++.++.|.|+|.+ |||+.++.+.++..+|.+..+-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34456777788775 4556778888899999999999999998 999999999999999999998776
Q ss_pred cccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec
Q 023063 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 202 (288)
+...+.++..+.|+|.|... .....++|..|.+ .|.....+.....-+...+++.++..+..+
T Consensus 130 ----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k------~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 192 (599)
T PF06609_consen 130 ----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK------WRGLGLAIASIPFIITTWISPLIAQLFAAH 192 (599)
T ss_pred ----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc------hhhhHhHHHHHHHHhhhcccHHHHHHhccC
Confidence 67778889999999977655 4455689999876 566665555554444444566666555556
Q ss_pred cchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 203 IGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
.+||+.|++..+...++++...++.
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 6899999998887777666544443
No 132
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.39 E-value=1.3e-11 Score=115.28 Aligned_cols=182 Identities=13% Similarity=0.095 Sum_probs=120.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++.+.+..++.....+++..++|.|+++..|+++.++++......+...++.+++|+++||+ |+++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3455555666666677788889999999988899999999998889899999999999999998 754433333322222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
..+........+ ..+.+......++.+++.............|.+|++ .|+++.++.
T Consensus 330 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~ 386 (438)
T TIGR00712 330 VTIAVIVYWMNP-----------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAGFT 386 (438)
T ss_pred HHHHHHHHHhcC-----------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh------heeeehhhh
Confidence 111111100000 012222233333444433222222234567888877 699999999
Q ss_pred HHHHHHHH-HHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 182 YFVMGAAI-LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 182 ~~~~~~g~-~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
+...++|+ .++|.+.|.+.++.||...|.+..++.+++.+..+...
T Consensus 387 ~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 387 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred chHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 88878775 68999999999988999988877776666665544443
No 133
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.38 E-value=6e-11 Score=107.79 Aligned_cols=179 Identities=13% Similarity=0.103 Sum_probs=142.2
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+.+.++..+...++...+.|...+|+-.++++..|++....+++...+.++..++..++|+++|| +.|+++.....+.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 34567777788888888999999999999999999999999999999999999999999999999 7888888887777
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.+..+.+.+.. .+.+...+..++.++...........-.++..|+ .+....+
T Consensus 287 a~~~l~l~~~~---------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~-------~~~~a~s 338 (394)
T COG2814 287 ALALLALTFTG---------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPD-------AADLAGS 338 (394)
T ss_pred HHHHHHHHHhc---------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC-------chHHHHH
Confidence 77776666544 1344555555556666655444444445553334 4788888
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
......|+|..+|..++|.+.+++|+....++.+++.+++++......+
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999999999888888776666544
No 134
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.38 E-value=4.4e-11 Score=112.42 Aligned_cols=178 Identities=16% Similarity=-0.004 Sum_probs=121.2
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHH--------H
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT--------I 92 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~--------i 92 (288)
++.+|.+.+..++....++.+..++|.|+.+.+|++..+.++......++..++.+++|+++||+ ++|+. +
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 35677788888888899999999999999999999999999999999999999999999999997 64421 1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhh
Q 023063 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (288)
Q Consensus 93 ~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 172 (288)
..+......+..+..... . ..+.....+...+.+.+.+...+.......|..|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------- 392 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPY-L------------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR------- 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHH-c------------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-------
Confidence 111111111111111111 0 00223333334444455554444444455565554
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHhheeecc---chhhhhhHhHHHHHHHHHHHHH
Q 023063 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQDNI---GWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 173 ~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~---g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.+|...++.+...++|+.++|.+.+++.+.. +|+..|.+.++..+++.+....
T Consensus 393 ~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5899999999999999999999999887653 3777888777766666555443
No 135
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.37 E-value=5.2e-11 Score=113.37 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=138.0
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~ 106 (288)
+.......+++.+....-++-++. +..-|+...+++.....+-..+..+++|.++||+ .|||.++.+-++..+..+.+
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L 92 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLL 92 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHH
Confidence 335555666666555555554544 4567899999999999999999999999999998 99999999988777666655
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
.+.... ...+++.+++..++.|++.+...|...+++.|..|++ +...+.+......|
T Consensus 93 ~~l~~~-----------------~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~------~L~~A~al~s~~~n 149 (524)
T PF05977_consen 93 AVLAFF-----------------GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE------DLPAANALNSISFN 149 (524)
T ss_pred HHHHHh-----------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh------hHHHHHHHHHHHHH
Confidence 544311 1226777888888999999999999999999999987 68899999999999
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+...+||.++|.+....|-...|.+-++..++.++.+...++
T Consensus 150 iar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 150 IARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999888888888888877766655544444433
No 136
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.36 E-value=2.3e-11 Score=112.86 Aligned_cols=164 Identities=9% Similarity=-0.019 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHH-hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHH-HHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQ 100 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~-i~~~~~l~~ 100 (288)
.+|......++....++++..++|.|+++ ..|.+..+++.......++..++.+++|+++||+ |||+. +.....+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 45566677777888889999999999976 3477888889888999999999999999999998 87764 333333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+ +.... . +......+..+.++|.....+.......|.+|++ +|+.++++
T Consensus 322 ~~~~-~~~~~-------------------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~a~g~ 373 (412)
T TIGR02332 322 AGWL-LASAT-------------------D--HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ------ARAIAIAV 373 (412)
T ss_pred HHHH-HHHhc-------------------C--CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH------HHHHHHHH
Confidence 3322 11111 0 1111222222333343333333444556677766 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFA 215 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~ 215 (288)
.+...++|+.++|.+.+.+.+..| |+..|++.+++
T Consensus 374 ~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 374 INATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999988875 88888766553
No 137
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.36 E-value=4e-11 Score=107.13 Aligned_cols=162 Identities=12% Similarity=0.066 Sum_probs=121.0
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHh--cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
+..+...+..++...+-.++..|++.|+.+. +|+++.+++...+.+..+..++..+++++.||+ |+||.+.++..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 3444444455554445556778899999854 799999999999999999999999999999998 9999988888777
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.++..... ... ...+..+.|++.+.++|...+...+.++++ .+.+.+
T Consensus 219 ~~~~~l~~~~~----------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-------~~~asa 268 (310)
T TIGR01272 219 VLLSIGAALTH----------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRH-------TSQGSG 268 (310)
T ss_pred HHHHHHHHHcC----------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-------hhhhHH
Confidence 77664444322 111 123455788999999999999988888875 233333
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHH
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~ 215 (288)
.. ....+|+.+.|.+.|.+.+..|.+.+|++..++
T Consensus 269 i~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 269 IL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 43 456799999999999999988888887755443
No 138
>PRK09669 putative symporter YagG; Provisional
Probab=99.35 E-value=2.1e-11 Score=114.11 Aligned_cols=171 Identities=11% Similarity=0.111 Sum_probs=117.8
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchh-HHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRF-WTITIASIIYQIGMI 104 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr-~~i~~~~~l~~i~~~ 104 (288)
+..+..+..+..+..+++.|+++++|+++.+++.+..+..+...+..|+.|+++||. +||| +.++.+.+...++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344555556666678899999999999999999999999999999999999999993 3875 455566666666655
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
++... |.+. .....+.+++..++.+.+..+......++.+|+.++.+ +|++..++....
T Consensus 96 l~f~~---p~~~-------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~~ 154 (444)
T PRK09669 96 LTFYT---PDFG-------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFAL 154 (444)
T ss_pred HHHhC---CCCC-------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHHH
Confidence 44432 2211 12234455555566677777777788899999886543 688888888888
Q ss_pred HHHHHHHHHHhHhheee-------ccchhhhhhHhHHHHHHHH
Q 023063 185 MGAAILVAVTVLVYIQD-------NIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 185 ~~~g~~i~~~~~~~l~~-------~~g~~~~f~~~~~~~~~~~ 220 (288)
.++|+.+++.+...+.. ..||+..+.+.+++..+..
T Consensus 155 ~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~ 197 (444)
T PRK09669 155 SFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLF 197 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 88888777654433221 2356665555555444433
No 139
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.34 E-value=4.4e-11 Score=107.62 Aligned_cols=155 Identities=13% Similarity=0.096 Sum_probs=124.1
Q ss_pred chHHHHHHHHHHHHHhHHhhh-hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFN-TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
+.++......++....++... .+.|.|+++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 345555555555666665555 6778888877999999999999999999999999999999998 99999888776666
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+...... + +.+.+.+..++.|++.+...+...+++.|.+|++ +|++..+.
T Consensus 289 ~~~~~~~~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~ 341 (365)
T TIGR00900 289 LAILVVGLTP--------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAE------LLGRVFGA 341 (365)
T ss_pred HHHHHHHhhc--------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHH
Confidence 6655554433 1 2566667778889999988888999999999987 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG 204 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g 204 (288)
++...++|..++|.+.|++.+++|
T Consensus 342 ~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 342 QFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998877543
No 140
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.34 E-value=8.8e-11 Score=109.72 Aligned_cols=187 Identities=13% Similarity=0.092 Sum_probs=131.7
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.+|.+.+..++..-+|.++..++|.|+++.+ +.........+..+...+..|++|+++||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 45677777777776677777778999998755 333333334455678889999999999998 999999998887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCC--------------
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD-------------- 167 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-------------- 167 (288)
+.....+.. |.- ...+.+.+.+..+...++.|.-++.+..++.+.+|++.
T Consensus 329 ~~~~~~l~l--p~~--------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~ 392 (462)
T PRK15034 329 FSALLFLTL--PGT--------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA 392 (462)
T ss_pred HHHHHHHHh--ccc--------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHH
Confidence 665443322 210 11255666666666677778888888888888887410
Q ss_pred -hhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHhc
Q 023063 168 -PKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 168 -~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
...+++.|...++......+|+++-|.+.+...+.+| +...|++..++.+++.++-+...
T Consensus 393 ~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 393 QREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 0112356788888889999999999988777666554 77788888777777776666554
No 141
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.34 E-value=2.6e-10 Score=105.18 Aligned_cols=169 Identities=10% Similarity=-0.112 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.++...+..++.....+......|.|+.+++|+++.+.+.......++..++.++.|+++||+ |+|+.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 445444444455555556666678888888999999998887777778888999999999998 9999999988877777
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.++....... .+.+.+.+.++.++.++|.+...+..........+ + ++++..+.++
T Consensus 295 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~------~~g~~~~~~~ 350 (406)
T PRK15402 295 LLLAALATVI-----------------SSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-V------SKGTVSAAMG 350 (406)
T ss_pred HHHHHHHHHc-----------------ccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-c------cccHHHHHHH
Confidence 7766653310 11134556677778888888766665554433323 3 5999999999
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~ 216 (288)
+...+|..+++.+.+.+.+..++....+...+..
T Consensus 351 ~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 351 MLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Confidence 9999999999999999888777655444433333
No 142
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=1.2e-10 Score=107.93 Aligned_cols=144 Identities=15% Similarity=0.043 Sum_probs=105.2
Q ss_pred hHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 023063 37 AVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (288)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~ 116 (288)
..+.+..++|.|+++ .|.++.+.+.......++..++.+++|+++||+ |||+.+..+.++..+..++.....
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP------ 317 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc------
Confidence 334456778888875 699999999888888899999999999999998 999998888776665544433222
Q ss_pred CCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhH
Q 023063 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (288)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 196 (288)
.+ ....+....+..+++..+..+..+.++.|.+|++ .|++..+..+....+|+.++|.+.
T Consensus 318 -------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 318 -------------QD-NYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE------VRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred -------------cc-cHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH------HHhhhhhHHHHHHhHHHHHHHHHH
Confidence 00 1121212222222233334456678889999987 699999999999999999999999
Q ss_pred hheeeccchhhh
Q 023063 197 VYIQDNIGWGWG 208 (288)
Q Consensus 197 ~~l~~~~g~~~~ 208 (288)
+++.+..|+...
T Consensus 378 g~l~~~~g~~~~ 389 (426)
T PRK12307 378 TWLGITMGLGAA 389 (426)
T ss_pred HHHHHcccHHHH
Confidence 999888886543
No 143
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.32 E-value=5.4e-11 Score=112.94 Aligned_cols=154 Identities=8% Similarity=-0.031 Sum_probs=124.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.........++...++++...++|.|+++.+|+++.+++.......+...++.++.|++.||+ |+|+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3444455566666777778888899999999999999999999999999999999999999998 999999888888877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+++.... ...+.+......++.|+|.|...+.......+..|++ +++...+.+
T Consensus 338 ~~~~l~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~g~~~~~~ 392 (495)
T PRK14995 338 SFYGLAMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE------KAAAAGAIE 392 (495)
T ss_pred HHHHHHHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH------hcchHHHHH
Confidence 776655432 1113344455677889999988887888888888877 699999999
Q ss_pred HHHHHHHHHHHHHhHhheee
Q 023063 182 YFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~ 201 (288)
+...++|+.+|+.+.+.+.+
T Consensus 393 ~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 393 TMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887644
No 144
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.32 E-value=4e-11 Score=112.85 Aligned_cols=156 Identities=13% Similarity=0.084 Sum_probs=124.5
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++...+..++..+.+++...++|.|+++.+|+++.++++......++..++.++.|++.||+ |||+.+.++..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3444455666677778888888899999999999999999999999999999999999999998 999999988888877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+..++.... . .+.+.+.+....++.|+|.+...+.......+..|++ +++.+.+..
T Consensus 334 ~~~~~~~~~-~-----------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~------~~g~~~~~~ 389 (485)
T TIGR00711 334 GFYWRAFTF-T-----------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPH------KIARGSSLS 389 (485)
T ss_pred HHHHHhccC-C-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHhHHHHHH
Confidence 776665221 0 1113445555677888998887777777777878776 699999999
Q ss_pred HHHHHHHHHHHHHhHhheeec
Q 023063 182 YFVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~ 202 (288)
+...++|+.+++.+.+.+.++
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877554
No 145
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.32 E-value=1.5e-10 Score=106.13 Aligned_cols=170 Identities=8% Similarity=0.028 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
.+......++...+.+....+++.|+.+.+|+++.+.+.......++..++.++.|+++||+ |+|+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 44444444444455555566778888888899999999999999999999999999999998 99999988887777776
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhh-hhcccCCCChhhhhhhhhHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAF-GADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
++..... + +.+...+..++.++|.+...+..... ..+..+.+ .++... .+
T Consensus 280 ~~~~~~~--------------------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~ 330 (382)
T PRK10091 280 LMLFFFG--------------------G-MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE------LLGAAG--GQ 330 (382)
T ss_pred HHHHHHH--------------------h-hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch------HHHHHH--HH
Confidence 5554322 0 22333334444555544444333333 33333332 344432 35
Q ss_pred HHHHHHHHHHHHhHhheeec-cchhhhhhHhHHHHHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~i~~ 223 (288)
...++|..++|.+.|++.+. .+|+..+.+.+++.++.....
T Consensus 331 ~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 331 IAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 56789999999999988875 579888888776665554433
No 146
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.31 E-value=2.3e-10 Score=104.84 Aligned_cols=167 Identities=8% Similarity=-0.004 Sum_probs=125.7
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++..++..++....+.....+++.|+. +.|.+..+.+.+.+...+...+..++.|++.||+ |+|+.+..+.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44555555566666666666777888986 5899999999988888888888889999999998 999999988888777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.++..... +.+.+++..++.|++.+...+....+..+. +++ ++++..+.+
T Consensus 283 ~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~ 333 (382)
T PRK11128 283 RWGLMGSTT----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGS------EVIRLQALY 333 (382)
T ss_pred HHHHHHhhh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHh------hhHHHHHHH
Confidence 766655444 566677778888888888777777777775 333 467777776
Q ss_pred H-HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 182 Y-FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 182 ~-~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
+ ....+|..++|.++|.+.+.+|+. .|+..+++.++++
T Consensus 334 ~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 334 SALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 5 556778899999999999988874 5555555444443
No 147
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.2e-11 Score=115.43 Aligned_cols=174 Identities=16% Similarity=0.132 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHhHHhhh---hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 25 PFIFSNEVCEKLAVVGFN---TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~---~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.+.+..|+.+...+++. ..+-..++++++.+..+++++.++...+..+..|+.+.+.||+ |.|.+++.|.+++.+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 334445555555555544 2344566788999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHH-HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
|.++..++. +.+.+++.. ++.|+|.++........++..|++ +|+.+.++
T Consensus 124 g~~lssF~~----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-------kR~lA~Gi 174 (509)
T KOG2504|consen 124 GLLLSSFAT----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-------KRALATGI 174 (509)
T ss_pred HHHHHHHHh----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-------HHHHHHhh
Confidence 999999887 677677665 677999999998888999988887 59999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
-..+..+|.++-|.+..++.+.+|||..+++...+.+-.++.....++
T Consensus 175 a~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 175 AVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999888877766555555555554
No 148
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.3e-10 Score=108.58 Aligned_cols=140 Identities=13% Similarity=0.154 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHH
Q 023063 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVS 140 (288)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (288)
+.+++++.+++.++..+.|+++||+ |||++++++.++..++.+++..+... ....++.++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------~~~e~li~G 122 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------PSFEMLILG 122 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------hhHHHHHHH
Confidence 4467788899999999999999999 99999999999988888888776622 256788999
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh-h-eeeccchhhhhhHhHHHHHH
Q 023063 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV-Y-IQDNIGWGWGLGIPTFAMFL 218 (288)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~-~-l~~~~g~~~~f~~~~~~~~~ 218 (288)
|++.|+..|......+-|+.|..|++ .||........+..+|..++..++. . +.....|...+.+..+..++
T Consensus 123 R~i~Gl~~gl~~~~~pmyl~E~sP~~------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 123 RLIVGLACGLSTGLVPMYLTEISPKN------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL 196 (485)
T ss_pred HHHHHHHhHHHHHHHHHHHhhcChhh------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999998 7999999999999999999966653 3 33445688888777776666
Q ss_pred HHHHHHHh
Q 023063 219 SIIAFLIG 226 (288)
Q Consensus 219 ~~i~~~~~ 226 (288)
.++...++
T Consensus 197 ~l~~l~~~ 204 (485)
T KOG0569|consen 197 QLALLPFL 204 (485)
T ss_pred HHHHHhcC
Confidence 55544443
No 149
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.30 E-value=4.7e-11 Score=107.88 Aligned_cols=162 Identities=13% Similarity=0.103 Sum_probs=115.4
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHH--HHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS--IIY 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~--~l~ 99 (288)
+.++.+.+..++.....+.+..+++.|+.+.+|++..+.+.......+...++.++.|+++||..+||+...... ...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 345556666666777777788889999999999999999999999999999999999999998624443332211 111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++........ ..+.....+..++.|+......+....+..|.+|++ .|++..+
T Consensus 296 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g 349 (379)
T TIGR00881 296 IVSLLVYWLNP--------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKK------AAGTAAG 349 (379)
T ss_pred HHHHHHHhcCc--------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcc------hhHHHHH
Confidence 11111111100 112333344445556555555566677889999887 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhh
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGL 209 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f 209 (288)
+++...++|+.++|.+.|.+.+++||+..|
T Consensus 350 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 350 FVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999999999988654
No 150
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.5e-10 Score=99.73 Aligned_cols=156 Identities=14% Similarity=0.092 Sum_probs=128.2
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHH-H
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA-S 96 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~-~ 96 (288)
+.....+|.+.+..++...+.+-+...-+.++++.+|+|+..++.+.+...+...+..++.|.++||+ |++-....+ .
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 34567889888888888888888888889999999999999999999999999999999999999999 998665555 4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 023063 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (288)
Q Consensus 97 ~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (288)
+....+..++.++.. --+.+..+.|+......-..++.++-..|++ +.|+
T Consensus 339 ~~tl~~H~~l~Ft~l------------------------sPy~~m~~lGLsysllAcslWP~va~~vpE~------qLGT 388 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTFL------------------------SPYTSMTFLGLSYSLLACSLWPCVASLVPEE------QLGT 388 (459)
T ss_pred HHHHHHhhhHHhhhc------------------------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH------Hhcc
Confidence 555556666665441 1245556777777776666788888888888 6999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhheeeccc
Q 023063 177 YFNWYYFVMGAAILVAVTVLVYIQDNIG 204 (288)
Q Consensus 177 ~~~~~~~~~~~g~~i~~~~~~~l~~~~g 204 (288)
+++..+...|+|-.+.|++.|.+.++-|
T Consensus 389 aygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 389 AYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred hHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 9999999999999999999999988766
No 151
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=3.2e-10 Score=105.41 Aligned_cols=164 Identities=10% Similarity=0.036 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccch-hHHHHHHHHHHHHHHHH
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTITIASIIYQIGMIC 105 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~~i~~~~~l~~i~~~~ 105 (288)
+-+..++...++-...++++.|+++++|++..+.+++.+...++..+++++.|.++||+ || |+++.++.++..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 33455555555555668899999999999999999999999999999999999999998 65 77777777766666666
Q ss_pred HHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCC--hhhhhhhhhHHHHHHH
Q 023063 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD--PKQATKTWKYFNWYYF 183 (288)
Q Consensus 106 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 183 (288)
..+.. +.+.+++.+++.+++.+...+...+...+...+.. ......|.+.++
T Consensus 86 ~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G---- 139 (418)
T TIGR00889 86 AAQVT----------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG---- 139 (418)
T ss_pred HHHhc----------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh----
Confidence 55443 45666677777787766665555444322211000 000002334433
Q ss_pred HHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 184 ~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
.+|..++|.+++.+.....|. .|++.+++.++..
T Consensus 140 --~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 140 --TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred --hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 367788888888764332343 4555554444433
No 152
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.29 E-value=1.1e-10 Score=110.30 Aligned_cols=147 Identities=10% Similarity=0.053 Sum_probs=107.7
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH----hccch-hHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----AYAGR-FWTITIASIIYQIGM 103 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Gr-r~~i~~~~~l~~i~~ 103 (288)
+..+..++.+..+..+++.|+++.+|+++..++.+..+.-+...+..|+.|+++| |+ || |+-++.+.+.+.++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 3445566667777788999999999999999999999999999999999999999 65 88 556666777766666
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
+++.... .. ++....+.+++..++..++.........++.+|+.++.+ +|.+..++...
T Consensus 92 ~llf~~p---~~-------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~ 150 (473)
T PRK10429 92 FLLFSAH---LF-------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRF 150 (473)
T ss_pred HHHHcCC---CC-------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHH
Confidence 5554321 11 011123444455566778888888888999999886543 78888888777
Q ss_pred HHHHHHHHHHHhHh
Q 023063 184 VMGAAILVAVTVLV 197 (288)
Q Consensus 184 ~~~~g~~i~~~~~~ 197 (288)
..++|+.+.+.+..
T Consensus 151 ~~~ig~~~~~~~~~ 164 (473)
T PRK10429 151 FASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666655443
No 153
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.29 E-value=1.9e-10 Score=104.16 Aligned_cols=154 Identities=10% Similarity=-0.005 Sum_probs=115.3
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+..+.+.+..++....+++...++|.|+++ .|++..+.+.+.+...++..++.++.|+++||+-+||+.+..+.++..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 344555555556677778888899999975 7999999999999999999999999999999982356667777777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+.+.... +.... ...++.|++.+...+...+.+.+..++++ +++...+..
T Consensus 276 ~~~~~~~~~----------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~ 327 (355)
T TIGR00896 276 GLCGLLFAP----------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMA 327 (355)
T ss_pred HHHHHHHhh----------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHH
Confidence 766555433 11111 13456789998888877777666555432 578888888
Q ss_pred HHHHHHHHHHHHHhHhheeeccc
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIG 204 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g 204 (288)
+...++|..++|.+.|++.+++|
T Consensus 328 ~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 328 QSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888999999999999988776
No 154
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=1.3e-10 Score=107.00 Aligned_cols=170 Identities=13% Similarity=0.094 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhc---CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~ 99 (288)
.++......++....+.....+.+.|+.+.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3444444444444444445556788887655 45666778888888888888999999999998 9999999988888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++..+..... +.+.+++..++.+++..........+..+..+++ .++...+
T Consensus 295 ~l~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~at~~~ 346 (396)
T TIGR00882 295 SVRIIGSSFAT----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVR------LSATIYL 346 (396)
T ss_pred HHHHHHHHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc------eEEEeeh
Confidence 87776655433 4555566677777776555455555666666665 4555555
Q ss_pred H-HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHH
Q 023063 180 W-YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (288)
Q Consensus 180 ~-~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i 221 (288)
. ++....+|+.+++.+.|++.+..||+..|.+.+++.++..+
T Consensus 347 ~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 347 IGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 4 66788999999999999999989999999887776655544
No 155
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.28 E-value=3.4e-10 Score=103.92 Aligned_cols=175 Identities=15% Similarity=0.043 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
++..+...++...+......+.+.|+.+ .|+++.+.+++...... ...++.+++|++.||+ |+|+.+..+..+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444455555656666666778888875 79999999998877654 5567788999999998 9999998877665333
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+........+. .......+...++.+++.+...+...+...+..++++ .+++.++..+
T Consensus 288 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~ 346 (390)
T TIGR02718 288 ALLWFAQAAFWL----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTAVQ 346 (390)
T ss_pred HHHHHHHHHccc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHHHH
Confidence 332221110000 0122233333344556666666677777767666522 6899999999
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i 221 (288)
...++|..++|.++|++.+..|++..|.+.+++.+++.+
T Consensus 347 ~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 347 STRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999999999999999999988998888877766555443
No 156
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.28 E-value=7e-11 Score=109.78 Aligned_cols=162 Identities=16% Similarity=0.097 Sum_probs=120.5
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.++.+++..++...+++......+.|++..++ +..+.+.+..+..+...++.++.|+++||+ |||+++.++..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 455556666666666666655555666665555 456667777777888899999999999998 999999999888877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 180 (288)
+.+...+.. .+.+.+.+..++.+++.+...+...++++|..+.++- .+.+++|..++.
T Consensus 300 ~~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 358 (437)
T TIGR00792 300 GYLIFFFAG---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSV 358 (437)
T ss_pred HHHHHHHcc---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHH
Confidence 776655422 1345555666778899988888899999998764321 122357899999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchh
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWG 206 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~ 206 (288)
+++...+|..+++.+.+++.+..||.
T Consensus 359 ~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 359 RTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999887766663
No 157
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.27 E-value=1.9e-11 Score=113.86 Aligned_cols=203 Identities=13% Similarity=0.107 Sum_probs=136.5
Q ss_pred HHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH----hccchhH-HHHHHHHHHHHHHHHH
Q 023063 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----AYAGRFW-TITIASIIYQIGMICL 106 (288)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Grr~-~i~~~~~l~~i~~~~~ 106 (288)
+..++.+.....+++.|+++.+|+++..++.+..+..+...+..|+.|.++| |+ |||| .++++.++..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4555566666678899999999999999999999999999999999999999 66 8766 4556777777777776
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
.... |. ..+.......+.+..++..++.........++.+|..++.+ +|.+..++......
T Consensus 90 f~~~--p~------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 90 FSPP--PA------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSM 150 (428)
T ss_pred hccc--cc------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHH
Confidence 6431 10 00111133344566666789999999999999999998765 79999999888888
Q ss_pred HHHHHHHHhHhheeecc-------chhhhhhHhHHHHHHHHHHHHHhccceeecCCCCChhhHHHHHHHHHHHhC
Q 023063 187 AAILVAVTVLVYIQDNI-------GWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKR 254 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~-------g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (288)
+|..+...+.+.+.+.. +|+....+.+++.++..++.....++.+++.+++++..+..+.++..+|||
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr 225 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNR 225 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccc
Confidence 88876666655443322 566666666555555444444443442222223333334444444445554
No 158
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.27 E-value=7.4e-10 Score=100.77 Aligned_cols=162 Identities=11% Similarity=0.072 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+...+...+....++....+.|.|+++++|+++.+.+.+.....++..++.++.|++.||+ |||+.+..+..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444444455556666777788899889999999999999999999999999999999998 9999998888777777
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+++...... .......+.....+.+++.+...+.......|..|+ ++++..+.++
T Consensus 286 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~ 341 (385)
T TIGR00710 286 AVLLEITAIL-----------------GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-------VAGTASALFG 341 (385)
T ss_pred HHHHHHHHHh-----------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-------cchHHHHHHH
Confidence 6666543310 001233444555677888888888888888888764 4888888877
Q ss_pred HHHHHHHHHHHHhHhheeeccchhhhh
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGWGWGL 209 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~~~~f 209 (288)
.....++.+.+.+.+.+.+..++...+
T Consensus 342 ~~~~~~g~i~~~~~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 342 TLRLVLGAIVGYLVSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHhccccChHHHHH
Confidence 766554444444455555554554433
No 159
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.26 E-value=4.5e-10 Score=105.97 Aligned_cols=176 Identities=10% Similarity=0.098 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccc-----hhHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-----RFWTITIASI 97 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-----rr~~i~~~~~ 97 (288)
.+..+....+.+... +.....++.++++++|+++++.+...+...+...+- +++|.++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K-~l~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALK-PFAGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhc-CCCCccchHHHHHHHH
Confidence 334444577778887 777778889999999999999988888888877775 5599999998 7 7777777765
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+.. ......+.. .+.......+.+++.+++.+.......++..|..+ +++ +.++..
T Consensus 104 l~~-~~~~~~l~~-------------------~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~ 159 (468)
T TIGR00788 104 LGS-AILYGLLPG-------------------KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSL 159 (468)
T ss_pred HHH-HHHHHhccc-------------------ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCe
Confidence 542 111122211 01123333345678889999988999999999998 432 134556
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.++.+...++|..+++.++|.+.+.++|+..|++.+++.++..+...+
T Consensus 160 ~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~ 207 (468)
T TIGR00788 160 VSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL 207 (468)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh
Confidence 667777778999999999999999899999998887777666433333
No 160
>TIGR00895 2A0115 benzoate transport.
Probab=99.26 E-value=2.1e-10 Score=104.34 Aligned_cols=147 Identities=14% Similarity=0.058 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+.+....++....++....++| ++.+++|++..+.+.......++..++.++.|+++||+ |||+.+...... .+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~-~~~ 327 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLG-AVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHH-HHH
Confidence 334444555566667777777777 55667899999999999999999999999999999998 998554443333 333
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
..++.... .+.+..++..++.+++.+...+...+++.|.+|++ .|++..++.+
T Consensus 328 ~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~ 380 (398)
T TIGR00895 328 AVLVGSTL---------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTA------IRATGVGWAI 380 (398)
T ss_pred HHHHHHHh---------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHH------HHHHHHHHHH
Confidence 32222211 03445556667888888888889999999999987 6999999999
Q ss_pred HHHHHHHHHHHHhHhhe
Q 023063 183 FVMGAAILVAVTVLVYI 199 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l 199 (288)
....+|..++|.+.|++
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999998865
No 161
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.7e-10 Score=107.33 Aligned_cols=153 Identities=13% Similarity=0.097 Sum_probs=125.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 023063 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (288)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 130 (288)
++.++...+-+.+.+++.++..++.+.+|.|.||+ .-.+.+....++..+-.++.....
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~-------------------- 132 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH-------------------- 132 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 66778888999999999999999999999999998 866666666555555444444433
Q ss_pred cchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe------eeccc
Q 023063 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI------QDNIG 204 (288)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l------~~~~g 204 (288)
+.+.+.+.|++.|+..++.+|....+++.++.++ +|+..+++++...++|+.+|..+...+ ....|
T Consensus 133 --s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~------e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 133 --SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS------ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred --hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh------hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 6788899999999999999999999999999998 699999999999999999999888764 23568
Q ss_pred hhhhhhHhHHHHHHHHHHHHHhccceee
Q 023063 205 WGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (288)
Q Consensus 205 ~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (288)
||+.|++.+++.+...++.++..|..+.
T Consensus 205 W~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 205 WRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred ceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999998777766665555554443
No 162
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.25 E-value=1.2e-09 Score=100.84 Aligned_cols=165 Identities=11% Similarity=0.013 Sum_probs=115.5
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++..+...++.....++...+++.++.+++|++..+.+.......++..++.++.|++.||. +|+..+. +..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~-~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAG-APLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHH-HHHHHHH
Confidence 3445444444555555556556664444467899999999988888889999999999999996 5544344 3333333
Q ss_pred H-HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 102 G-MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 102 ~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
. .++..... +.+.+.+..++.|++.+...+...+++.+..|++ .++..+.
T Consensus 294 ~~~~l~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 344 (394)
T PRK10213 294 SALVLTLWGS----------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSI 344 (394)
T ss_pred HHHHHHHHhh----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHH
Confidence 3 33322222 3455666777889999988888888888888743 5555666
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~ 217 (288)
.....++|..+|+.++|++.+..|++..+...+++.+
T Consensus 345 ~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 345 QVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 6677789999999999999998888877777665443
No 163
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=8.7e-11 Score=104.78 Aligned_cols=117 Identities=14% Similarity=0.124 Sum_probs=103.2
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchH
Q 023063 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (288)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (288)
.+..-+|.+-+.+.+...+++++.|.++||+ |||+++++|.+...+...+.+.+. +.
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~----------------------~F 121 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR----------------------NF 121 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------HH
Confidence 3455678889999999999999999999999 999999999999888777777766 67
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee
Q 023063 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 201 (288)
..+.++|++.|+..|-. +.+.++++|..+++ .|+..++.+..+..+|..+||.+++++.+
T Consensus 122 ~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek------~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNL-SVIRAIISDVVSEK------YRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhhhccCch-HHHHHHHHhhcChh------hccceeeeeehhhhcchhhcchhhhHHHh
Confidence 77788899999887754 56789999999987 69999999999999999999999999887
No 164
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.24 E-value=1.5e-09 Score=102.12 Aligned_cols=157 Identities=13% Similarity=0.036 Sum_probs=107.8
Q ss_pred hHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 023063 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (288)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~ 123 (288)
+.|.++ ++.|++.....+......+...++.+++|+++||+ |||+.++.+.++..++.+.+..... +
T Consensus 293 ~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-~---------- 359 (479)
T PRK10077 293 YAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-T---------- 359 (479)
T ss_pred HHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-c----------
Confidence 334443 56788877777777777778889999999999998 9999999999988888877764330 0
Q ss_pred ccccccccchHHHHHHHHHHHHHhccC-cchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh-----
Q 023063 124 QVCQEANKGQVAILYVSLLLAALGSGG-IRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV----- 197 (288)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~----- 197 (288)
+..........++.+++.+. ..+...++++|.+|++ .|+.++++.+....+|..+++.+.+
T Consensus 360 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~ 426 (479)
T PRK10077 360 -------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA------IRGKALAIAVAAQWIANYFVSWTFPMMDKN 426 (479)
T ss_pred -------CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 00111222333344444433 2366788999999987 6999999998888888888765554
Q ss_pred -heeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 198 -YIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 198 -~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
++.+.++|+..|++.++..+++.+..+..
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 427 SWLVAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred cchhhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 44456788877877666555555444433
No 165
>PRK10133 L-fucose transporter; Provisional
Probab=99.24 E-value=4.3e-10 Score=105.23 Aligned_cols=165 Identities=13% Similarity=0.088 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHh-HHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
++...+..++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ |||+++..+..+..++
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 33344444555566666667888886 567899999999999999999999999999999998 9999998887766655
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.++..+.. +. .......+.|++.+.+.|+..+...|.++++ .+.+.+...
T Consensus 339 ~~~~~~~~----------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~~ 388 (438)
T PRK10133 339 CLISAFAG----------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIV 388 (438)
T ss_pred HHHHHHcC----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHHh
Confidence 54443322 11 1234567789999999999999999988764 333333333
Q ss_pred HHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSI 220 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~ 220 (288)
...+|+.++|.+.|.+.+..| -+..|.++.++.+...
T Consensus 389 -~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 389 -MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred -HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 234678888889999888887 6777776655544433
No 166
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.24 E-value=6.9e-10 Score=101.91 Aligned_cols=179 Identities=11% Similarity=-0.055 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHH--HHHHHHHHhhhHHHH-HHHHHhccchhHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANT--LTNFGGTGSLTPLIG-AFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-G~laDr~~Grr~~i~~~~~l~~ 100 (288)
...+....+.+...+....+.+|.|+++ .|.+..+.+.. .........+..|+. ++.+||+ ||||..++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 4455667777888877777889999875 69999999996 355677777777776 6679997 99998766653322
Q ss_pred H-HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 101 I-GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 101 i-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
. ....+.... +. ......+.....+.++..+...+...++..|..+++ +++...+
T Consensus 81 ~~~~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~------~~~~~~~ 136 (390)
T TIGR02718 81 SACLASLALVG--PD----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGR------TLAKGNA 136 (390)
T ss_pred HHHHHHHHcCC--cc----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhhHHHH
Confidence 2 222222111 10 011222233334445555566666666777766655 4677777
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
...++..+|..+++...+++.+.+||+..|++.+++.++..+..+...+
T Consensus 137 ~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 137 VQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7778888999999988888889999999999888877665555444433
No 167
>PRK11462 putative transporter; Provisional
Probab=99.22 E-value=6.2e-10 Score=104.80 Aligned_cols=149 Identities=11% Similarity=0.174 Sum_probs=112.4
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchhHH-HHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWT-ITIASIIYQIGMI 104 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~-i~~~~~l~~i~~~ 104 (288)
...+..+..+..+..++..|+++..|+++..++.+..+.-+.-.+.-|+.|+++||. +||||. ++++.+.+.++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 344555666666678899999999999999999999999999999999999999973 488754 4556677777766
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
+++.. |... .+.....+.+..++..++..+......++.+|+.++.+ +|++..++...+
T Consensus 96 llf~~---p~~s-------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~ 154 (460)
T PRK11462 96 LAYST---PDLS-------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVL 154 (460)
T ss_pred HHHhC---CCCC-------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHH
Confidence 65532 2110 12223444555566788888888889999999987654 899999999999
Q ss_pred HHHHHHHHHHhHhh
Q 023063 185 MGAAILVAVTVLVY 198 (288)
Q Consensus 185 ~~~g~~i~~~~~~~ 198 (288)
.++|+.+++.+...
T Consensus 155 ~~iG~~~~~~~~~p 168 (460)
T PRK11462 155 ATAGGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988887766543
No 168
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.22 E-value=1.5e-09 Score=100.21 Aligned_cols=155 Identities=10% Similarity=0.171 Sum_probs=103.0
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHH-HHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~ 121 (288)
.+.+.|+.+++|+++.+.+++..... +...++.+++|++.||+ |||+.+..+..+..+..+........+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~-------- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP-------- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 34455777788999999998876554 45788899999999998 999988777766555544433222111
Q ss_pred CcccccccccchHHHHHHHH----HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 122 GEQVCQEANKGQVAILYVSL----LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
.+.+.+.+.. +..+++.+...+....++.+.+|.+ .+ +.+....++|..+++.++|
T Consensus 301 ----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 301 ----------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT------QY----ALLSALASVGRVYVGPTSG 360 (402)
T ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH------HH----HHHHHHHHHHHHHHHHHHH
Confidence 1333344333 2345556666666677777777654 23 3344445667766667889
Q ss_pred heeeccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 198 YIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 198 ~l~~~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.+.+..||+..|.+.+++.+++.+..+..
T Consensus 361 ~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 361 YLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888887776766555443
No 169
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.22 E-value=3.6e-10 Score=107.44 Aligned_cols=166 Identities=17% Similarity=0.110 Sum_probs=105.9
Q ss_pred HHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHH------------HHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAAN------------TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
..++..+.+|+...+.|.+++ +.|++..+++. ...+..++..++.++.++++||+ |||+.++++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 344456678888888888885 56775432211 12233345556778899999998 99999988887
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..++.+++..... + .+ ....+....+...++..+..+....+.+|.+|++ .|+++
T Consensus 374 ~~~~~~~~l~~~~~-~----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~------~R~~~ 429 (502)
T TIGR00887 374 ILTVLFFVLGFAYN-H----------------LS-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTR------YRSTA 429 (502)
T ss_pred HHHHHHHHHHHHHH-h----------------cc-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchh------HHHHH
Confidence 77776655554320 0 00 1111111111122222233456677889999998 69999
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeec----------cchhhhhhHhHHHHHHHHH
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDN----------IGWGWGLGIPTFAMFLSII 221 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~----------~g~~~~f~~~~~~~~~~~i 221 (288)
.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+
T Consensus 430 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 430 HGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999988763 3344456655555544443
No 170
>PRK09848 glucuronide transporter; Provisional
Probab=99.21 E-value=8e-10 Score=103.47 Aligned_cols=150 Identities=12% Similarity=0.059 Sum_probs=99.1
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchhHHH-HHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTI-TIASIIYQIGMI 104 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~i-~~~~~l~~i~~~ 104 (288)
...+..+..+....++++.|+++.+|+++.+++.+..+..+...+..++.|+++||. +||||.. ..+.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 345556666666677888999999999999999999999999999999999999985 3667644 555554444444
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
++... |... +.....+..++...+.+++.+...+...++..++..+.+ +|.+..++..++
T Consensus 95 ~~~~~---~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r~~~ 154 (448)
T PRK09848 95 LVFWV---PTDW------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAARGIA 154 (448)
T ss_pred HHHhC---cCCC------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHHHHH
Confidence 33211 1000 011123334445566788888888777787777766543 577766655443
Q ss_pred -----HHHHHHHHHHhHhh
Q 023063 185 -----MGAAILVAVTVLVY 198 (288)
Q Consensus 185 -----~~~g~~i~~~~~~~ 198 (288)
..++..++|.+.+.
T Consensus 155 ~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 155 ASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 33555566666554
No 171
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.21 E-value=2.6e-10 Score=103.23 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.+..-+++.++.+=+..++.+....|...++|++..+..++....++.+.++++++|+|.||+ |.|+++..+++++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 555555677777777777788888999999999999999999999999999999999999998 9999999999888877
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.+...... ....+++.-++.|...|...+..-++.++..|++ +-+++++.|+
T Consensus 332 ~~~~~~~~----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~------k~~~fFglya 383 (438)
T COG2270 332 ALYLIFLE----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKG------KEGRFFGLYA 383 (438)
T ss_pred HHHHHHcc----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc------cccceeehhh
Confidence 76665544 2334555556889999999999999999999998 6899999999
Q ss_pred HHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHh
Q 023063 183 FVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+.....+.++|...+.+.+.+| -|..+....++..+++++++..
T Consensus 384 ltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 384 LTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 9999999999999998877666 4666666655555555554443
No 172
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.21 E-value=1.8e-13 Score=127.90 Aligned_cols=138 Identities=18% Similarity=0.230 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHH
Q 023063 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAIL 137 (288)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 137 (288)
.+.++..+...++..++.+++|+++||+ |||++++++..+..++.++..++. ...+.+.+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~-------------------~~~~~~~~ 105 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAP-------------------SYNNFWML 105 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccc-------------------cccccccc
Confidence 3567888999999999999999999998 999999999999999998888755 11256778
Q ss_pred HHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec---cchhhhhhHhHH
Q 023063 138 YVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN---IGWGWGLGIPTF 214 (288)
Q Consensus 138 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~---~g~~~~f~~~~~ 214 (288)
.++|++.|++.|+..+..+.++.|..|++ .|+......+....+|..++..+...+.+. .+||..+.+..+
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAI 179 (451)
T ss_pred ccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999988 689999999998889988888766544332 359988877766
Q ss_pred HHHHHHH
Q 023063 215 AMFLSII 221 (288)
Q Consensus 215 ~~~~~~i 221 (288)
..++.++
T Consensus 180 ~~l~~~~ 186 (451)
T PF00083_consen 180 PSLLVLL 186 (451)
T ss_pred ccccccc
Confidence 6544433
No 173
>PRK09848 glucuronide transporter; Provisional
Probab=99.20 E-value=6e-10 Score=104.35 Aligned_cols=163 Identities=12% Similarity=0.120 Sum_probs=120.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.+....+..++...+++......+.|+++.+|.++...++......+...++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4455555566666666666666677788888888776665554444566778899999999998 999999999988888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 180 (288)
+.+.+.+.. ..+.+.+.+..++.++|.+...+...++.+|..+.++- .+.++.|..++.
T Consensus 307 ~~~~~~~~~--------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~ 366 (448)
T PRK09848 307 GYLLFFWVS--------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSL 366 (448)
T ss_pred HHHHHHHcC--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHH
Confidence 877665422 11455566667788999999999999999998876532 123356888899
Q ss_pred HHHHHHHHHHHHHHhHhheeeccch
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
+++...+|..+++.+.+.+.+..||
T Consensus 367 ~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 367 FSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999988876555454
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.20 E-value=1.5e-09 Score=103.35 Aligned_cols=169 Identities=15% Similarity=0.135 Sum_probs=136.9
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~ 106 (288)
++...++.++....+...+|.+.++.+|.++...|++.+...++..++.++.+++.+|+ ++++.+..+.+++.++.+.+
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH
Confidence 33334444444444556688888899999999999999999999999999999999997 99999888888888877777
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
.+.. +.+...+..++.|++.........+.+-+..|++ .||+.++.+.....
T Consensus 302 al~~----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~------~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 302 ALSP----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW------VRGRVFSIYQMVFF 353 (524)
T ss_pred hcch----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHhHHHHHHHHHHH
Confidence 7655 6677777778888888888778888888888887 79999999999999
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHH
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~ 224 (288)
.+..+|..+.|.+.+.+|-+..+.+.++..+++.++..
T Consensus 354 g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888777766555554433
No 175
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.20 E-value=6.4e-10 Score=115.42 Aligned_cols=163 Identities=10% Similarity=0.027 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHH-HHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLT-KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
.++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.+++|+++||+ ++++.+.++.++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444444555555566677889999999999998 999999999999999999999999998 999988888777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+++.... +.+.+++..++.|++.++..+...+++.+..|++ .|++++++.
T Consensus 312 ~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~rg~~~~~~ 363 (1146)
T PRK08633 312 SLFLLPTAP----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEK------ELGKVLAAN 363 (1146)
T ss_pred HHHHHHHhh----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCcc------chhhhhHHH
Confidence 766665543 4556667777888998888888889999999887 699999999
Q ss_pred HHHHHHHHHHHHHhHhheee-ccchhhhhhHhHH
Q 023063 182 YFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTF 214 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~-~~g~~~~f~~~~~ 214 (288)
++..++|..+++.+++.+.. .+++...|.+.+.
T Consensus 364 ~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 364 NFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999999888777665533 2334444444333
No 176
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.19 E-value=6.3e-10 Score=105.06 Aligned_cols=165 Identities=14% Similarity=0.075 Sum_probs=117.0
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.+..+++..++...+.+......+.|.+...+ +....+.+.....+...++.++.++++||+ |+|+++.++..+..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556666666676777666666666655554444 455566666666678888899999999998 999999988877776
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCC-hhhhhhhhhHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD-PKQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 180 (288)
+.+........ .+.+.+.+.+..++.+++.+...+...++++|..+.++ +.++++.|..++.
T Consensus 309 ~~~~~~~~~~~-----------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 309 SCGVLLLMGLA-----------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHhcc-----------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 66555432100 11245556666677888999888899999999977542 2233356778899
Q ss_pred HHHHHHHHHHHHHHhHhheeeccch
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
..+...+|..+++.+.|++.+..||
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999998887665555
No 177
>PRK10054 putative transporter; Provisional
Probab=99.18 E-value=6e-10 Score=102.78 Aligned_cols=169 Identities=11% Similarity=-0.010 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHH--hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTT--QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
..+......++..+.+.....+.+.|+.. +.+.+....+.+.....+......++.|++.||+ |+|+.+..+..+..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 34444445555555555555666777753 3445566667777777666677778889999998 99999998888887
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
++.+...... .+.+.+.+..++.++|.+...+...+++.+..|++ .++++++.
T Consensus 286 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~------~~~~~~~~ 338 (395)
T PRK10054 286 IGLVGFIFSG---------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG------MKASYFSA 338 (395)
T ss_pred HHHHHHHHcc---------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc------cceehHhH
Confidence 7776665432 14455566677888888877778888888988876 57888776
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
.+ ...+|..++|.++|.+.++.|.+..|.+.++...++.
T Consensus 339 ~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 339 QS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW 377 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 54 5668999999999999999988877766555444443
No 178
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.18 E-value=9.4e-10 Score=102.45 Aligned_cols=162 Identities=16% Similarity=0.149 Sum_probs=131.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.+..+++..++...++.......+.|.+..+|.+ ...+.+..+..+...++.++.++++||+ |+|+++..+.++..+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 55666667777777777777778888888888877 4566677788889999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 180 (288)
+.++..+.. ..+.+.+++..++.|++.+.......++++|..+.++- .++++.|..++.
T Consensus 303 ~~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~ 362 (428)
T PF13347_consen 303 GFLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSV 362 (428)
T ss_pred HHHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHh
Confidence 988877654 12677788888999999999999999999999986542 233457888899
Q ss_pred HHHHHHHHHHHHHHhHhheeeccch
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
+.....+|..+++.+.+.+.+..|+
T Consensus 363 ~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 363 NSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999988877555554
No 179
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.16 E-value=1.5e-09 Score=100.26 Aligned_cols=152 Identities=8% Similarity=-0.060 Sum_probs=105.0
Q ss_pred hhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 023063 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (288)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~ 119 (288)
....++|.|+++..+ ++.+.+++.....+.........+++.||.++.++.+..+.++..++.+++....
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 344567888876655 6677777776666655544444455555543767777777777777766655443
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+.+.+.+...+.++|.+...+...+++.|..|++ ++++.++.++...++|..++|.+.|++
T Consensus 296 -------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 296 -------------NLQQLFTLICLFYIGSIIAEPARETLSASLADAR------ARGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc------cchhhhhHHHHHHHHHHHhcccchHHH
Confidence 3444555556677777777788888999999987 699999999999999999999999998
Q ss_pred eeccc----hhhhhhHhHHHHHHHH
Q 023063 200 QDNIG----WGWGLGIPTFAMFLSI 220 (288)
Q Consensus 200 ~~~~g----~~~~f~~~~~~~~~~~ 220 (288)
.++.+ ....|.+..++.++..
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 357 FDLGKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HHHHhhcCCcchHHHHHHHHHHHHH
Confidence 77642 2344444444443443
No 180
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.16 E-value=8.6e-10 Score=114.58 Aligned_cols=182 Identities=9% Similarity=-0.025 Sum_probs=127.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++..++..++..+.++.+.+++|.|+++.+|.++.+.+++.+...++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4555666666666677777788999999999999999999999999999999999999999987 666665555555544
Q ss_pred HHHHHHHHh-h-cCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 102 GMICLTISA-I-LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 102 ~~~~~~~~~-~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
+.+.+.+.. . .+..... + ...+.. ...+.+.++++.++.|++.+...+...+++.+.+|++ .+|++++
T Consensus 304 ~~~~l~~~~~~~~~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~G~v~g 373 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQL-K--SILVFL-SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA------HRARVIA 373 (1140)
T ss_pred HHHHHHhcccccccccccc-c--chhhhh-cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc------cceeeeH
Confidence 444333320 0 0000000 0 000000 0013455667777889999998888999999999988 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheee-ccchhhhhhHhHH
Q 023063 180 WYYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTF 214 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~f~~~~~ 214 (288)
..+....+|..+++++.+.+.. ..++...+.+.++
T Consensus 374 ~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 374 ANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999999999887753 3455555544443
No 181
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.15 E-value=2.8e-09 Score=97.50 Aligned_cols=166 Identities=10% Similarity=-0.059 Sum_probs=109.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchh---HHHHH-HHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF---WTITI-ASI 97 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr---~~i~~-~~~ 97 (288)
+.+|.+....++....+|++..|+|.|+++ .|++.. .+....+..+.+.++ .++++||. .|| +.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567777788888999999999999999965 678764 555555554444444 57888886 543 33222 232
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..+......... +.....+...+.+++.....+...++.+|.+|++ .|+++
T Consensus 266 ~~a~~~~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~rgt~ 317 (368)
T TIGR00903 266 LIAAFFLALAFEL----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKE------LHGKA 317 (368)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchh------hcCcc
Confidence 2222222222211 1222233344556666666677889999999998 69999
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHH
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
.++.+...++|+.++|.+.+.+.. |....|.+.++..+++.+..
T Consensus 318 ~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 318 AGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988886653 55566666665555555443
No 182
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.14 E-value=4.9e-09 Score=96.65 Aligned_cols=159 Identities=11% Similarity=0.028 Sum_probs=114.5
Q ss_pred HhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 023063 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (288)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~ 115 (288)
.........++.|+++.+|.++.+.+.+.....++..++.++.+++.||+ ++++.+..+..+ .+..+.+....
T Consensus 219 ~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~----- 291 (393)
T PRK11195 219 GAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH----- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh-----
Confidence 33444445567788888999999999999999999999999999999998 988888777533 33322222222
Q ss_pred CCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 023063 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (288)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 195 (288)
+.+...+..++.|++.+...+...+.+.+..|++. .+|+.++..+...++|..++..+
T Consensus 292 -----------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~ 349 (393)
T PRK11195 292 -----------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGL 349 (393)
T ss_pred -----------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHH
Confidence 34445556667888888888777777777644431 27999999999999999999988
Q ss_pred HhheeeccchhhhhhHhHHHHHHHHHHHH
Q 023063 196 LVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (288)
Q Consensus 196 ~~~l~~~~g~~~~f~~~~~~~~~~~i~~~ 224 (288)
.+.+ +.+|-+..+.+..+..++.+...+
T Consensus 350 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 350 YSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 8855 566767666666555555444333
No 183
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.13 E-value=2.3e-10 Score=104.32 Aligned_cols=121 Identities=18% Similarity=0.132 Sum_probs=95.4
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchH
Q 023063 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (288)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (288)
+++...+.+..+..++..++++++||++|++ |||+++...+++++++++.+.++. |..+..+-+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~---------------~~~~~~~~m 144 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSV---------------GTTSPLGVM 144 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCC---------------CCCCCcchh
Confidence 6777888888999999999999999999998 999999999999999998665543 223333467
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH----HHHHHHHHHHHHhHh
Q 023063 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY----FVMGAAILVAVTVLV 197 (288)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~i~~~~~~ 197 (288)
+.+++.|+++|+|.|+=+|...+..+|....+ +||...+... ++.-.|+.++-++..
T Consensus 145 ~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~------~RGa~iaavFa~Qg~GilaG~ivt~Iv~~ 205 (538)
T KOG0252|consen 145 MTLCFFRFLLGIGIGGDYPLSATIMSESANKK------TRGAFIAAVFAMQGFGILAGGIVALIVSA 205 (538)
T ss_pred hHHHHHHHHhhccccCCCcchHHHhhhhhhhc------cccceeEEEEEecchhHhhccHHHHHHHH
Confidence 88889999999999999999999999988877 5776665544 444444444444433
No 184
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.13 E-value=1.9e-09 Score=97.63 Aligned_cols=145 Identities=13% Similarity=0.058 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHH-HHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
.++.+++..++.+.+++...++++.|+++ +|+++.+.+.+..... +...++.+++|+++||+ |||+.+..+.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 35666666777788888888999999987 8999999988877665 56778899999999998 999998888877776
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.............. . .+..+.+.+....++.+++.+...+...+++.|.+|++ +|++.++.+
T Consensus 288 ~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~ 350 (356)
T TIGR00901 288 TNAGFVWLASNGHHD--------G---ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPK------FGATQMALL 350 (356)
T ss_pred HHHHHHHHHhcCccc--------c---cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC------ccHHHHHHH
Confidence 655444321000000 0 00013455666677789999999999999999999998 699999987
Q ss_pred HHHHH
Q 023063 182 YFVMG 186 (288)
Q Consensus 182 ~~~~~ 186 (288)
+...+
T Consensus 351 ~~~~~ 355 (356)
T TIGR00901 351 SSLSA 355 (356)
T ss_pred HHHHh
Confidence 76554
No 185
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.12 E-value=7.1e-09 Score=92.27 Aligned_cols=171 Identities=16% Similarity=0.111 Sum_probs=135.3
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+..|.+.+-.-+++..+|.+..|+|.++.+ .|+|..+++...+...+......+..-++++|.-.+|+.......++.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 356666666677899999999999999975 6999999999999999999999999999999876788888888899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
|.+.+.+... +...+. .+++|+|.|+.++..-.++.+..++.+ +.++..+..
T Consensus 287 G~~G~~~~P~---------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgma 338 (395)
T COG2807 287 GLVGLLLAPG---------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMA 338 (395)
T ss_pred HHHHHHHhhh---------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHh
Confidence 9988876541 222222 478899999999999999888776653 566677777
Q ss_pred HHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHH
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSII 221 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i 221 (288)
+....+=...+|.+.|++.|..| |+..+...+...++..+
T Consensus 339 Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 339 QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 77777777789999999988776 77666655554444433
No 186
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.12 E-value=4.5e-09 Score=93.52 Aligned_cols=160 Identities=17% Similarity=0.237 Sum_probs=136.0
Q ss_pred HHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 023063 35 KLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQ 114 (288)
Q Consensus 35 ~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~ 114 (288)
+-..-++ ..+..-+.+++|+|.+.+++++++..++..+..++..+++.|+ |.++.+..++++..+|.++-...
T Consensus 25 R~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~----- 97 (395)
T COG2807 25 RPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG----- 97 (395)
T ss_pred chhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-----
Confidence 4443333 4455667789999999999999999999999999999999998 99999999999999998877643
Q ss_pred CCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 023063 115 LRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVT 194 (288)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 194 (288)
+...++.+-.+.|.|.+..+...|.++-+.||++ .+..++.|..+..+|+.+++.
T Consensus 98 ------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~ 152 (395)
T COG2807 98 ------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAA 152 (395)
T ss_pred ------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhh
Confidence 3456778888999999999999999999999985 889999999999999999999
Q ss_pred hHhheeecc-chhhhhhHhHHHHHHHHHHHHHh
Q 023063 195 VLVYIQDNI-GWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 195 ~~~~l~~~~-g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
+...+.++. ||+....+-+...+++++..+.-
T Consensus 153 lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 153 LAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 988887776 79988877777777777766665
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.9e-09 Score=102.38 Aligned_cols=176 Identities=16% Similarity=0.142 Sum_probs=143.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchh--HHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF--WTITIASIIY 99 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr--~~i~~~~~l~ 99 (288)
+.++.+.....+..++++....+++.|.. ..+++..+++.+.++..+...++.++.|+++|+. ..+ ....++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45555666677778888888888999987 7899999999999999999999999999999998 633 3444444454
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 023063 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (288)
Q Consensus 100 ~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
.++.+.+.+.. +++.+...-++.|+..|......+..+.|..+.+ +...+++
T Consensus 376 gl~~~~~p~~~----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~------~l~~a~G 427 (509)
T KOG2504|consen 376 GLARLFLPFAT----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE------KLSNAYG 427 (509)
T ss_pred HHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh------hcchHHH
Confidence 45444444443 5667777778899999998888888999999988 6999999
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccc-hhhhhhHhHHHHHHHHHHHHHhc
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
+......++..++|.+.|++.+.+| |...|+..++..+++.+..++..
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999998887 88999999888888776665554
No 188
>PRK11043 putative transporter; Provisional
Probab=99.09 E-value=2.4e-08 Score=91.91 Aligned_cols=148 Identities=13% Similarity=0.064 Sum_probs=104.0
Q ss_pred HHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 023063 33 CEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (288)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~ 112 (288)
+....++....+.|.|++ +.|+++.+.+.......++..++..+.+++.||+ |+|+.+........++.+.+......
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455556677788876 4799999999887777778888899999999998 99987766665555554443332210
Q ss_pred CCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 023063 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (288)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 192 (288)
+ ..+.+.+.+...+.+++.+...+...+...|..|+ +++++.++++.....++..+
T Consensus 292 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~~~~~~ 347 (401)
T PRK11043 292 S-----------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-------ATGKAAALQNTLQLGLCFLA 347 (401)
T ss_pred c-----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-------cChHHHHHHHHHHHHHHHHH
Confidence 0 01334444555667888888888877777777764 48999999988888888888
Q ss_pred HHhHhheeeccchh
Q 023063 193 VTVLVYIQDNIGWG 206 (288)
Q Consensus 193 ~~~~~~l~~~~g~~ 206 (288)
+.+.+.+.+.....
T Consensus 348 ~~~~g~l~~~~~~~ 361 (401)
T PRK11043 348 SLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHccCCChhH
Confidence 88888776643333
No 189
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.09 E-value=1.4e-09 Score=97.40 Aligned_cols=141 Identities=17% Similarity=0.248 Sum_probs=114.4
Q ss_pred HHHHHHHHHHhHHhhhhhHHHHhHHhcCCC-HHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 023063 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMP-LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (288)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~ 105 (288)
++...++..+.++....+++.|+.+.+|++ ..+.+.......+...++.++.|+++||+ |+|+.+........++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 444455555677778888999989999999 89999999999999999999999999998 9888887777766666665
Q ss_pred HHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 023063 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (288)
Q Consensus 106 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (288)
+..... ..+.....+..++.|++.+...+...+++.|..|++ ++++..+..+...
T Consensus 290 ~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~ 344 (352)
T PF07690_consen 290 LLLLPF-------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE------YRGTAFGLFNSIG 344 (352)
T ss_dssp HCCSHH-------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC------HHHHHHHHHHHHH
T ss_pred HHHHHH-------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHH
Confidence 554331 113455556677788999999999999999999887 7999999999999
Q ss_pred HHHHHHHH
Q 023063 186 GAAILVAV 193 (288)
Q Consensus 186 ~~g~~i~~ 193 (288)
++|+.++|
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999987
No 190
>TIGR00898 2A0119 cation transport protein.
Probab=99.07 E-value=2.5e-09 Score=101.45 Aligned_cols=142 Identities=13% Similarity=0.040 Sum_probs=98.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 023063 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (288)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 131 (288)
.++.+.... .....+...++.+++++++||+ |||+.+.++.++..++.+++.... +.
T Consensus 352 ~~~~~~~~~---~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~-------------------~~ 408 (505)
T TIGR00898 352 NLGGNIYLD---LFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP-------------------VD 408 (505)
T ss_pred ccCCChHHH---HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC-------------------CC
Confidence 345543332 2344556677888899999998 999999998888777776665433 01
Q ss_pred chHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhH
Q 023063 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGI 211 (288)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~ 211 (288)
..+...+..++.+++.+...+...++.+|.+|++ .|+.+.++.+....+|+.++|.+.+ + ...++...+.+
T Consensus 409 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~ 479 (505)
T TIGR00898 409 -LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTV------VRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVL 479 (505)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH------HHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHH
Confidence 1233334444555666666778889999999987 6999999999999999999999888 3 33455566666
Q ss_pred hHHHHHHHHHHHHH
Q 023063 212 PTFAMFLSIIAFLI 225 (288)
Q Consensus 212 ~~~~~~~~~i~~~~ 225 (288)
.+++.+++.+...+
T Consensus 480 ~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 480 FGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHHHc
Confidence 66555555444433
No 191
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.06 E-value=3.3e-08 Score=89.96 Aligned_cols=148 Identities=12% Similarity=-0.071 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
.+...+..++...+.+....+.+.++.+.+|+++.+.+.......+...++.++.|++.||+ |||+.+..+..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 34344444455555566666677788888999999999999999999999999999999998 99999988876654443
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
+.+..... .+...+.+.++..+.+.+.+........++.|..|+ .+++..+..+.
T Consensus 275 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~ 329 (377)
T PRK11102 275 IWLVVSAL------------------LDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-------MAGTASSLAGT 329 (377)
T ss_pred HHHHHHHH------------------HhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-------cchHHHHHHHH
Confidence 33322210 011233333444444444444555555667777663 47777776554
Q ss_pred H-HHHHHHHHHHhHh
Q 023063 184 V-MGAAILVAVTVLV 197 (288)
Q Consensus 184 ~-~~~g~~i~~~~~~ 197 (288)
. ..+|..+++.+.+
T Consensus 330 ~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 330 LRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHh
Confidence 3 4567777776544
No 192
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.1e-08 Score=94.96 Aligned_cols=206 Identities=14% Similarity=0.140 Sum_probs=138.9
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchhH-HHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFW-TITIASIIYQIGMI 104 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~-~i~~~~~l~~i~~~ 104 (288)
...+..++.+-.+..++..|.++.+|+++..+|.+..+.-+.-.+.-|+.|.+.||. +||+| -++.+.+...+.+.
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 445555666666778899999999999999999999999999999999999999975 47654 56666677777777
Q ss_pred HHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 023063 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (288)
Q Consensus 105 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (288)
+++.+.. .+ .++.....++...+.++++..++....++.+|+.++.+ +|.+..++....
T Consensus 99 l~F~~p~-~~---------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~s~R~~~ 157 (467)
T COG2211 99 LLFITPD-FS---------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLTSWRMVF 157 (467)
T ss_pred HHHcCCC-cc---------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHHHHHHHH
Confidence 7766441 00 12344445566678899999999999999999987664 899999999999
Q ss_pred HHHHHHHHHHhHhheeec-------cchhhhhhHhHHHHHHHHHHHHHhcc-ceeecCCCCC-hhhHHHHHHHHHHHhCc
Q 023063 185 MGAAILVAVTVLVYIQDN-------IGWGWGLGIPTFAMFLSIIAFLIGYP-LYRNLDPAGS-PFTRLLQVCVAAFRKRK 255 (288)
Q Consensus 185 ~~~g~~i~~~~~~~l~~~-------~g~~~~f~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 255 (288)
.++|.++...+.+.+... .||+..-.+.+++..+..+..+...+ +..+..+.++ ...+..+.+...+|||.
T Consensus 158 ~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp 237 (467)
T COG2211 158 ASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRP 237 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccch
Confidence 999988877666554332 24554433333333333332222222 2222222222 34444555555666653
No 193
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.03 E-value=1.1e-08 Score=96.00 Aligned_cols=180 Identities=13% Similarity=0.047 Sum_probs=119.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccch------hHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR------FWTITIA 95 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr------r~~i~~~ 95 (288)
+.+|.+....++.+.+++.+..++|.|+.+.+|++..+.|+..++..+.+.+..+++|.++||...| ++-+.-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 5788999999999999999999999999999999999999999999999999999999999998221 1111111
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 023063 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (288)
Q Consensus 96 ~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
......+..+..+.. .+ |+. .......+.++..+.|+..++.. .-..|..|. .-+
T Consensus 338 i~~~~~ai~l~~l~~-~~------------~~~-~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~apq-------~a~ 392 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAF-TS------------DEH-RLLAVILLTIAIGLSGFNISGFY----KNHQDIAPQ-------HAG 392 (466)
T ss_pred HHHHHHHHHHHeeee-cC------------CCc-chHHHHHHHHHHHHcccchhhhH----hhhhhccch-------HHH
Confidence 122222222222211 11 000 00011122222222222222211 111222333 478
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhheeec---cchhhhhhHhHHHHHHHHHHHHHh
Q 023063 176 KYFNWYYFVMGAAILVAVTVLVYIQDN---IGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 176 ~~~~~~~~~~~~g~~i~~~~~~~l~~~---~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
..++..+....+.++++|.+.+.+..+ ..|+..|.+.+++.+++.+.+.+.
T Consensus 393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 889999999999999999999988843 369999999988888877666554
No 194
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.00 E-value=7e-08 Score=88.56 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=58.7
Q ss_pred hhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
....+.+.|+++++|+++.+.+.......+...++.++.|++.||+ |||+.+.++..+..++.+.+....
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567788888999999999888888889999999999999998 999999999888888777766544
No 195
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.00 E-value=6.3e-08 Score=86.57 Aligned_cols=159 Identities=13% Similarity=0.131 Sum_probs=107.0
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 023063 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (288)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~ 124 (288)
....+-+++|++..|++.+.........+..++.|.++||+ |||+.-++..+++.++.+.-- ..
T Consensus 56 Y~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~~-------------- 119 (354)
T PF05631_consen 56 YLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-SS-------------- 119 (354)
T ss_pred hhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-cc--------------
Confidence 33344467999999999999999999999999999999998 999999988888888775332 22
Q ss_pred cccccccchHHHHHHHHHHHHHhccCcchhhhhhh-hcccCCCChhhhhhhhhHHHHHH-HHHHHHHHHHHHhHhheeec
Q 023063 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFG-ADQFDETDPKQATKTWKYFNWYY-FVMGAAILVAVTVLVYIQDN 202 (288)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~i~~~~~~~l~~~ 202 (288)
+...++++|++.|++.....+.--+.+ .|. .+++- +++..+..++... +...+-.+.+..++-++.+.
T Consensus 120 --------~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh-~~~g~-~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~ 189 (354)
T PF05631_consen 120 --------NYPVLLLGRVLGGIATSLLFSAFESWMVHEH-NKRGF-PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW 189 (354)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCC-ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 578899999999999988877766643 443 22210 1113344444333 22223333444444455555
Q ss_pred cch--hhhhhHhHHHHHHHHHHHHHhccc
Q 023063 203 IGW--GWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 203 ~g~--~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
.+. ..+|....++.+++.+.+...+++
T Consensus 190 ~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 190 FGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred hCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 554 577888877777776665554443
No 196
>PRK09669 putative symporter YagG; Provisional
Probab=99.00 E-value=1.3e-08 Score=95.24 Aligned_cols=161 Identities=14% Similarity=0.090 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.++.++...++...+........+.|.+..++. +...+.+.....+...++.+++++++||+ |||+.+..+.++..++
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 230 QWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 344444444444344333333333343333332 33334445555677778888999999998 9999998887665544
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNWY 181 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 181 (288)
.+...+.. ..+.+.+++..++.+++.+...+...++++|..+.++. .++++.|..++.+
T Consensus 308 ~~~~~~~~--------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~ 367 (444)
T PRK09669 308 SALIFFIP--------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTN 367 (444)
T ss_pred HHHHHHhC--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHH
Confidence 43332211 12455666777788999999999999999999875432 2334567788889
Q ss_pred HHHHHHHHHHHHHhHhheeeccch
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
.+...+|..+++.+.+.+.+..|+
T Consensus 368 ~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 368 LFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999887666665
No 197
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.99 E-value=2.3e-08 Score=89.19 Aligned_cols=199 Identities=14% Similarity=0.093 Sum_probs=131.5
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~ 108 (288)
..............+.+..-+....+.+..+..++......++.++....|.++|++ ||||...+......+...+-..
T Consensus 84 g~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~ 162 (528)
T KOG0253|consen 84 GMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGA 162 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcC
Confidence 333444444555556566666777788889999999999999999999999999998 9999888776655554444443
Q ss_pred HhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 023063 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (288)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (288)
+. ++..+++.+.+.++|.|+ .|...++-.|..|..+ |....-.. ....+|
T Consensus 163 sp----------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig 212 (528)
T KOG0253|consen 163 SP----------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIG 212 (528)
T ss_pred CC----------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHH
Confidence 33 677788889999999999 7888888899888874 54444333 445667
Q ss_pred HHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc--cceeecCCCCChhhHHHHHHHHHHHhCccccCCC
Q 023063 189 ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY--PLYRNLDPAGSPFTRLLQVCVAAFRKRKLTMVTD 261 (288)
Q Consensus 189 ~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (288)
..+...+.-....++|||+-.+...+-..+.+....+.. +++.-. .+++ .+..+.+.+..|-++.+.|..
T Consensus 213 ~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~--~G~~-~kAletL~kiArmNg~qlplg 284 (528)
T KOG0253|consen 213 QVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLA--KGDD-YKALETLHKIARMNGKQLPLG 284 (528)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhh--cCCh-HHHHHHHHHHHHhcCCCCCcc
Confidence 777776666667778999876666543333333333322 232221 2222 233455566666555555543
No 198
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.97 E-value=7.4e-09 Score=93.69 Aligned_cols=140 Identities=13% Similarity=0.081 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+.+....++.....+.+..+++.|+++.+|+++.+++.+.....+...++.+++|+++||+ |||+.+..+..+..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 344444455555556667778899999999999999999888888899999999999999998 9998888777666666
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
..++.+... ++.+.+...+...+.+++.|...+...++++|.+|+ +++...+..+
T Consensus 305 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~g~~~g~~~ 359 (366)
T TIGR00886 305 AFLVVLGLV------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-------ATGAVSGLVG 359 (366)
T ss_pred HHHHHhcCC------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-------hcccHHHHHH
Confidence 555544320 001344444555556666777777777888888874 4888888877
Q ss_pred HHHHHH
Q 023063 183 FVMGAA 188 (288)
Q Consensus 183 ~~~~~g 188 (288)
...++|
T Consensus 360 ~~~~~g 365 (366)
T TIGR00886 360 AIGNLG 365 (366)
T ss_pred HhccCC
Confidence 766655
No 199
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=2.2e-07 Score=85.95 Aligned_cols=111 Identities=15% Similarity=0.131 Sum_probs=79.2
Q ss_pred HHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 023063 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAI 111 (288)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~ 111 (288)
++.-+.+-...++++.|+++ .|++..|.|.+.+...+...+++++.|+++||+..+||.+.+..++..+.........
T Consensus 12 f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~- 89 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS- 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 33334444455788999975 6899999999999999999999999999999984467777666655555444443332
Q ss_pred cCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCC
Q 023063 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE 165 (288)
Q Consensus 112 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 165 (288)
+.+.+++..++..+......+...++.-+...+
T Consensus 90 ---------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~ 122 (400)
T PF03825_consen 90 ---------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD 122 (400)
T ss_pred ---------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc
Confidence 445555556667777777777777777666654
No 200
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.94 E-value=1.7e-08 Score=93.95 Aligned_cols=189 Identities=14% Similarity=0.115 Sum_probs=139.7
Q ss_pred ccccCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHH-hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccch-hHHH
Q 023063 15 KRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTI 92 (288)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~~i 92 (288)
+..+.+||.+++..+..++...-++.+.+..-.|+++ +.+.+.+-.|++++...++..++.+++|+-..|. |. |+-+
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pl 105 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPL 105 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCH
Confidence 3456789999999999999888887777777788875 4677888899999999999999999999999998 75 7778
Q ss_pred HHHHHHHHHHHHHH-HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhh
Q 023063 93 TIASIIYQIGMICL-TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (288)
Q Consensus 93 ~~~~~l~~i~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 171 (288)
+.+.++..+|.++- .+.. .|+ + ..+++.++|++.|+|.|.. +..-+|+++....+
T Consensus 106 i~s~ii~~~g~llY~~l~~-~~~----------------~-~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~----- 161 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAY-VPN----------------G-VKYLMLVARILTGVGVGNF-AVLRAYIADASTVE----- 161 (488)
T ss_pred HHHHHHHHHHHHHHHHHHh-ccc----------------c-hHHHHHHHHHHcCcCcccH-HHHHHHHHhccCcc-----
Confidence 88888899988887 4433 222 2 6788999999999997754 45678888877666
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhHh----heeecc---------chhhhhhHhHHHHHHHHHHHHHhccc
Q 023063 172 TKTWKYFNWYYFVMGAAILVAVTVLV----YIQDNI---------GWGWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~~i~~~~~~----~l~~~~---------g~~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
.|.++++....+..+|..+||.+.. .....+ -|..+-++.+++.++.++.+.+..++
T Consensus 162 -dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 162 -DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred -chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 3777777776666666666665543 222211 13445566777666766666655543
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.93 E-value=4.4e-08 Score=90.90 Aligned_cols=163 Identities=11% Similarity=-0.068 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHh-cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQ-LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.+...+..++......+..++++.|+.+. .+.+...++.....+.....++.+++|+++||+ ++|+.+.++..+..+.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 33334445555455556668889998653 245555556566667788889999999999998 9999988887777776
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
.++..... ... .....++.++..+.++|.+.+...+..+++ .....+...
T Consensus 313 ~ll~~~~~----------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~-------~~~~s~~l~ 362 (410)
T TIGR00885 313 CLGSIFAG----------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQD-------TKYGAAGLV 362 (410)
T ss_pred HHHHHHcC----------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-------hhhhHHHHH
Confidence 66665533 111 234455677778888899999999998875 222222233
Q ss_pred HHHHHHHHHHHHhHhheeecc------chhhhhhHhHHHHHH
Q 023063 183 FVMGAAILVAVTVLVYIQDNI------GWGWGLGIPTFAMFL 218 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~------g~~~~f~~~~~~~~~ 218 (288)
++ .+|+.+.|.+.|++.|.. +.+..|.++.++.+.
T Consensus 363 ~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 363 MA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 33 399999999999999854 477778776655433
No 202
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.92 E-value=7e-08 Score=89.69 Aligned_cols=162 Identities=19% Similarity=0.192 Sum_probs=124.5
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
|.+..+++..++...++....+....|.+..+|.++.+..+..........++.++...+.+|+ |+|+++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3444445555555556555566677888888888888888888888888888899999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNW 180 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 180 (288)
+.+++.+.. ..+.+++++..++.++|.+...+..+++++|..+-.+- .+.++-|..++.
T Consensus 315 ~~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~ 374 (467)
T COG2211 315 GYLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSG 374 (467)
T ss_pred HHHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHH
Confidence 999888755 12567777888899999999999999999998875432 234455777788
Q ss_pred HHHHHHHHHHHHHHhHhheeeccc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIG 204 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g 204 (288)
+....-+|..++..+.|++....|
T Consensus 375 ~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 375 MTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888777787777777666544444
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.91 E-value=1.4e-07 Score=87.26 Aligned_cols=180 Identities=12% Similarity=0.038 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.+...++..++...+.-....+.+.|+++.-|.+....+...++..+.=.+...+.+++..|+ |.++++.++.+.+++=
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVR 286 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444455555555555567788899865447777777777777777778888899999998 9999999999888877
Q ss_pred HHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 023063 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (288)
Q Consensus 103 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
..+...... | ..........+..+.|+..+........|+.+..|++ .|+++.++++
T Consensus 287 ~~l~a~~~~-~----------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~------~~at~Q~l~~ 343 (400)
T PF03825_consen 287 WLLYAYFSD-P----------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE------LRATAQGLYS 343 (400)
T ss_pred HHHHHHhcC-C----------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc------chHHHHHHHH
Confidence 777766520 0 0001122233345689989999999999999999998 6899999877
Q ss_pred H-HHHHHHHHHHHhHhheeeccchhh------hhhHhHHHHHHHHHHHHHh
Q 023063 183 F-VMGAAILVAVTVLVYIQDNIGWGW------GLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 183 ~-~~~~g~~i~~~~~~~l~~~~g~~~------~f~~~~~~~~~~~i~~~~~ 226 (288)
. ...+|..++..++|++.+++|-+. .+.+.+++.++..+.+...
T Consensus 344 ~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 344 ALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 6 468999999999999999877543 3444554444444444443
No 204
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.91 E-value=2.6e-07 Score=84.77 Aligned_cols=138 Identities=9% Similarity=-0.036 Sum_probs=95.1
Q ss_pred hhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 023063 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (288)
Q Consensus 41 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~ 120 (288)
+....+.|+++.+|+++.+.++......++..++.++.+++.||+ |++... ......++.+...... ..
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~~------- 294 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPG-WF------- 294 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHH-Hh-------
Confidence 344566788888999999999888777778888888888888887 743322 2222222222222111 00
Q ss_pred CCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
...+.+.+....++.++|.+...+...++..|.+|+ +++...+..+...++|+.+++.+.+.+.
T Consensus 295 ---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 295 ---------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-------LAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------cchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 011344556667788888888888888888888875 4788888888889999999999988876
Q ss_pred eccch
Q 023063 201 DNIGW 205 (288)
Q Consensus 201 ~~~g~ 205 (288)
....+
T Consensus 359 ~~~~~ 363 (394)
T PRK11652 359 QTGQF 363 (394)
T ss_pred CCchH
Confidence 55333
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.90 E-value=1e-07 Score=87.61 Aligned_cols=179 Identities=13% Similarity=0.102 Sum_probs=138.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcC---CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLH---MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~ 96 (288)
..|++|.+.+........|+.+-...+.|.+..++ .++...|.+.+...+.-.+...+..++-+|+ |.|+.++++.
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag 296 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAG 296 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHH
Confidence 44677777766666666666666667888875443 3455677888888888899999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 023063 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (288)
Q Consensus 97 ~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (288)
.++.+=.++++++. +++.+.+...+-++-.+.......-|+++.+|++ ..++
T Consensus 297 ~i~~iRi~~~~~~~----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r------lsAt 348 (412)
T PF01306_consen 297 VIMAIRIIGSGFAT----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR------LSAT 348 (412)
T ss_dssp HHHHHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG------GHHH
T ss_pred HHHHHHHHHHhhhc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------HHHH
Confidence 98888888887766 6777888888889888888888899999999986 4556
Q ss_pred HHHH-HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 177 YFNW-YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 177 ~~~~-~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
.... ++.+.++|..+.+.+.|++.++.|++..|++.+.+++...++-.+..
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 6655 46788999999999999999999999999888777665555444433
No 206
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.89 E-value=1.2e-08 Score=93.75 Aligned_cols=75 Identities=11% Similarity=-0.104 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
+..+......++..+++-...++++.+|++..|++..+.|.+.+...+...+.+|+.|.++||. |.||.++....
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~ 81 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIA 81 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHH
Confidence 3455555556666666666778999999988999999999999999999999999999999998 97776655443
No 207
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.87 E-value=4.3e-08 Score=87.55 Aligned_cols=145 Identities=10% Similarity=0.053 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhc-------------------CCCHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQL-------------------HMPLTKAANTLTNFGGTGSLTPLIGAFVAD 83 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~~~G~laD 83 (288)
..+.+...-|...+.||+..-......+... ..+...-..=..+....-+.+.++.+++.|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 3444455666778888887543333332110 111111122234556777889999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhccc
Q 023063 84 AYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQF 163 (288)
Q Consensus 84 r~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 163 (288)
|+ |||++|-.+.+++.+..+++.... . .+....+++.+|+++.. .+.+.+.|..|.+
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~~c~-----------------~-rn~~tvllf~arafisg----~fqvaYvYtPEVy 463 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLTTCK-----------------T-RNAYTVLLFTARAFISG----AFQVAYVYTPEVY 463 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHHHhc-----------------C-cchhHHHHHHHHHHHhc----hheEEEEecCccc
Confidence 97 999999999999988888777644 1 12234455566665543 3456788999999
Q ss_pred CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhH
Q 023063 164 DETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (288)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 196 (288)
|+. .|+...|.-..+..+|+++.|.++
T Consensus 464 PTa------vRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 464 PTA------VRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred chh------hhhcchhhhhhHHhhhhhhhhHHH
Confidence 998 699999998999999999999888
No 208
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.8e-07 Score=86.41 Aligned_cols=161 Identities=12% Similarity=0.064 Sum_probs=106.8
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+..+..+...+++.+.-.....+....+-++-|++..++.++.........++.+.+.++-||+ |||+.++.+..++.+
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHH
Confidence 3444444555555444333333333334456799999999999999999999999999999998 999999999998888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHH---HHHHHHHHHHhccCc-chhhhhhhhcccCCCChhhhhhhhhH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAI---LYVSLLLAALGSGGI-RPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~g~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
..+++.....+... ...|. .+++.++..+..+.- .|..+-+.+|.+|.+ .|..+
T Consensus 348 ~~~~~~~~~~l~~~----------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~------~R~aa 405 (485)
T KOG0569|consen 348 ALLLMSIALFLSNS----------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS------ARSAA 405 (485)
T ss_pred HHHHHHHHHHHHHH----------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCcc------chHHH
Confidence 88877765422111 00111 223333333333332 356677889999998 48888
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccch
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
+++-.....+..++-......+.+..|-
T Consensus 406 ~s~~~~~~w~~~fiv~~~fp~l~~~~g~ 433 (485)
T KOG0569|consen 406 QSVATAVNWLSNFIVGFAFPPLQNVIGP 433 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8877777767776666666666665553
No 209
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.78 E-value=1.3e-06 Score=75.31 Aligned_cols=138 Identities=11% Similarity=0.093 Sum_probs=103.1
Q ss_pred hHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 023063 37 AVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (288)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~ 116 (288)
..|.+.. ....+++.+|++..|.+.+.....++..++ ++.|.+.|++ |.+.++.+|.+...+|+.++++...-
T Consensus 17 t~Y~Fs~-yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~---- 89 (250)
T PF06813_consen 17 TTYTFSA-YSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSG---- 89 (250)
T ss_pred cccchhh-hhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 4444433 455778899999999999999999998875 8889999998 99999999999999999999876510
Q ss_pred CCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhH
Q 023063 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (288)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 196 (288)
.......|.+.+...+.+.|....+........+.||.+ ||.+.++.-....+++.+-..+.
T Consensus 90 -----------~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 90 -----------RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred -----------ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehhhhHHHHhHHHHHHHHH
Confidence 001125566666666666666666555556667899874 99999988887778877765554
Q ss_pred hhe
Q 023063 197 VYI 199 (288)
Q Consensus 197 ~~l 199 (288)
..+
T Consensus 152 ~~~ 154 (250)
T PF06813_consen 152 SAF 154 (250)
T ss_pred HHH
Confidence 433
No 210
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.75 E-value=2.8e-07 Score=87.22 Aligned_cols=183 Identities=9% Similarity=0.024 Sum_probs=121.6
Q ss_pred HHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHH----HHHHHHHHHHHHhhhHHHHH----HHHHhccchhHH--HHHHHH
Q 023063 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK----AANTLTNFGGTGSLTPLIGA----FVADAYAGRFWT--ITIASI 97 (288)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~G----~laDr~~Grr~~--i~~~~~ 97 (288)
++..++....+.-..+.++.|..+..+.+... .+++.++..+...+.+++.. ++.||..+.+.. +.+|++
T Consensus 278 ~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~ 357 (475)
T TIGR00924 278 FLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGML 357 (475)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 33344444555555566777776654433211 44555555555555555544 455542133333 367788
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+..++.+.+.+...... .....+++++....++.++|.....+...++.++..|++ .||++
T Consensus 358 l~~~~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~------~~g~~ 418 (475)
T TIGR00924 358 FCGASFLTFAASIWFAD-------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR------LMGQM 418 (475)
T ss_pred HHHHHHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH------HHHHH
Confidence 88888777665421100 001236788888999999999999999999999999987 79999
Q ss_pred HHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccc
Q 023063 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
++.+.....+|..+++.+........+|...|...+++.++..++++...+.
T Consensus 419 ~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 419 LGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888876666677777777776666655555554443
No 211
>PRK11462 putative transporter; Provisional
Probab=98.75 E-value=7.3e-07 Score=84.05 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
+..++...++...+..........|.+..+|.. ...+.+...+.+...++.+++++++||+ |+|+.+..+..+..+..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~ 307 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVIS 307 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 333333444444444444444445555444443 3344566677778888999999999998 99988765554443333
Q ss_pred HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHHHH
Q 023063 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNWYY 182 (288)
Q Consensus 104 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 182 (288)
++..+.. ..+...+++..++.+++.+...+...++++|..+.++- .++++-|..++...
T Consensus 308 ~~~~~~~--------------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~ 367 (460)
T PRK11462 308 LAMFFVP--------------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTL 367 (460)
T ss_pred HHHHHhc--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHH
Confidence 3332221 11222334444556777777677777888887764321 12223455567777
Q ss_pred HHHHHHHHHHHHhHhheeeccch
Q 023063 183 FVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 183 ~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
+...+|..+++.+.+.+.+..||
T Consensus 368 f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 368 FVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 78888888888877766544444
No 212
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.72 E-value=1.1e-06 Score=81.49 Aligned_cols=170 Identities=15% Similarity=-0.002 Sum_probs=104.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.++...+..++....++.+....|.|+++.+|.++.+.++.......+..++..+.+.+.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4555555556666677777777789999998999999999987777777777777777766554 444444333444444
Q ss_pred HHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
+.+++...... ...+++..+++.++.++|.+...++.....- .+.+. .+|+..+.+
T Consensus 297 g~~l~~~~~~~-----------------~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~-----~~G~a~a~~ 352 (413)
T PRK15403 297 GLALLIVGNLL-----------------WPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNL-----PKGTVSASL 352 (413)
T ss_pred HHHHHHHHHHH-----------------ccccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCC-----CCcHHHHHH
Confidence 44444332100 0012333456677788888887777764332 22222 256666777
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHH
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~ 217 (288)
+.....+..+++...+++.++ +-...|....++..
T Consensus 353 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 353 NMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 777777777777777776554 44455555444433
No 213
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.70 E-value=2e-09 Score=102.92 Aligned_cols=191 Identities=13% Similarity=0.207 Sum_probs=2.9
Q ss_pred HhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 023063 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (288)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~ 115 (288)
....++.....+-+.++|+++.+++|++.+.+.++..+..++..++++|. .|-|.+-.|.+++.+|.+++++..++-..
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 55566666666777889999999999999999999999999999999997 77788888999999999988865433221
Q ss_pred CCCC------CC---Ccccc-------------------cccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCC
Q 023063 116 RPPP------CE---GEQVC-------------------QEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD 167 (288)
Q Consensus 116 ~~~~------~~---~~~~~-------------------~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 167 (288)
+... +. +...| .......+.+++++-++.|+|....++...+|+=|..+++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~- 173 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK- 173 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc-
Confidence 1000 00 01222 1112223567778889999999999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec---------------------cc-hhhhhhHhHHHHHHHHHHHHH
Q 023063 168 PKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN---------------------IG-WGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~---------------------~g-~~~~f~~~~~~~~~~~i~~~~ 225 (288)
.-+.+.++++....+|..+|.++++.+.+. .| |+.+|.+.+++.++..+.++.
T Consensus 174 -----~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 174 -----NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 578888999999999999999888764321 23 888888888877777776666
Q ss_pred hccceeec
Q 023063 226 GYPLYRNL 233 (288)
Q Consensus 226 ~~~~~~~~ 233 (288)
+.++.++.
T Consensus 249 FPk~lp~~ 256 (539)
T PF03137_consen 249 FPKKLPGT 256 (539)
T ss_dssp --------
T ss_pred CCccCCCc
Confidence 65555444
No 214
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=4.2e-07 Score=85.91 Aligned_cols=166 Identities=15% Similarity=0.085 Sum_probs=106.6
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchhHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTITIASII 98 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~i~~~~~l 98 (288)
..+|...+..++.....|++..++|.|+++..|++..+++.+...+.+++.++.+++|+++||. +.+|......+.+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4677788899999999999999999999986779999999999999999999999999999993 2677666666544
Q ss_pred HHHHH-HHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 99 YQIGM-ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 99 ~~i~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+.+.. +.+.... .......+.+....+.....++...-..+....+. ++-..
T Consensus 353 ~~~~g~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~ 405 (495)
T KOG2533|consen 353 YAIIGAISLLAAA----------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTT 405 (495)
T ss_pred HHHHHHHHHHhhc----------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHH
Confidence 44333 3333222 11222222222233333333444444555554442 44445
Q ss_pred HHHHHHHHHHHHHHHH-HhHhheeeccchhhhhhHhHH
Q 023063 178 FNWYYFVMGAAILVAV-TVLVYIQDNIGWGWGLGIPTF 214 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~-~~~~~l~~~~g~~~~f~~~~~ 214 (288)
.+....+.+.++.++| +..+.....++|...|....+
T Consensus 406 ~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 406 VSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred HhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 5555555555555544 444555666788888744433
No 215
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.63 E-value=3.2e-07 Score=89.08 Aligned_cols=199 Identities=12% Similarity=0.178 Sum_probs=147.1
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i 101 (288)
+.+..++....+....+.+......+-+.+.|+++.++.|++...+.++..+...+..+.+-|. -|-+.+-+|.+++.+
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4444444444443333346666677778889999999999999999999999999999999997 788888999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCC------------------------------Cc-cccc--ccccchHH-HHHHHHHHHHHh
Q 023063 102 GMICLTISAILPQLRPPPCE------------------------------GE-QVCQ--EANKGQVA-ILYVSLLLAALG 147 (288)
Q Consensus 102 ~~~~~~~~~~~p~~~~~~~~------------------------------~~-~~~~--~~~~~~~~-~~~~~~~l~g~g 147 (288)
+.+++++.. +...++. ++ ..|. ..++..++ +++++-++.|+|
T Consensus 175 gsll~alPH----f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG 250 (735)
T KOG3626|consen 175 GSLLFALPH----FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIG 250 (735)
T ss_pred HHHHHhChH----HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcC
Confidence 999888653 2222221 00 1121 22333344 666778899999
Q ss_pred ccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec------------------cc-hhhh
Q 023063 148 SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN------------------IG-WGWG 208 (288)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~------------------~g-~~~~ 208 (288)
....++...+|+=|...++ +-...+++++....+|.++|.++++++.+. .| ||.+
T Consensus 251 ~Tpi~tlGisYiDDnvk~~------~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlG 324 (735)
T KOG3626|consen 251 ATPIFTLGISYIDDNVKKK------NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLG 324 (735)
T ss_pred CCCCccCCCcccccccccc------CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHH
Confidence 9999999999998877766 588889999999999999999988875321 23 8889
Q ss_pred hhHhHHHHHHHHHHHHHhcccee
Q 023063 209 LGIPTFAMFLSIIAFLIGYPLYR 231 (288)
Q Consensus 209 f~~~~~~~~~~~i~~~~~~~~~~ 231 (288)
|++.+.+.++..+.++++.+..+
T Consensus 325 FLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 325 FLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHHHHhCcccCc
Confidence 99999888888887777765544
No 216
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.62 E-value=2.9e-06 Score=77.75 Aligned_cols=189 Identities=13% Similarity=0.064 Sum_probs=118.4
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~ 122 (288)
+.+.+|..+-+| +...+-+...++++......+.+-|+.|++ |-|.+.+++..+..+|..+-.++. .|+.-+
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~----- 136 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP----- 136 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc-----
Confidence 345667777778 777778889999999999999999999998 999999999999999999888766 342211
Q ss_pred cccccccccchHH--HHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 123 EQVCQEANKGQVA--ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 123 ~~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
..+ +...+-.+.+...-.+...-+-+.+-+|+++ +|..+...-.++..+|..++.++.+.+.
T Consensus 137 ----------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~------qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 137 ----------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPD------QRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred ----------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcc------hhhhhhhHHHhcchHHHHHHhhccceec
Confidence 222 3444444555444444433344556677777 5888877766676777777776666655
Q ss_pred ecc------chhh--hhhHhHHHHHHHHHHHHHhccceeecCCCCC---hh-hHHHHHHHHHHHhCc
Q 023063 201 DNI------GWGW--GLGIPTFAMFLSIIAFLIGYPLYRNLDPAGS---PF-TRLLQVCVAAFRKRK 255 (288)
Q Consensus 201 ~~~------g~~~--~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~ 255 (288)
.+. .|.. .|+...++..+.++...+.+++.++-||... +. .+..+.+++.++|+.
T Consensus 201 ~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~ 267 (480)
T KOG2563|consen 201 PSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQ 267 (480)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCcc
Confidence 443 3443 2333333333333444444444344333221 11 124555566666653
No 217
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.61 E-value=3.3e-06 Score=76.82 Aligned_cols=169 Identities=12% Similarity=0.154 Sum_probs=129.8
Q ss_pred HHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Q 023063 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTIS 109 (288)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~ 109 (288)
..+...++++.--..+-+|--+.||++..+...++.....+..++..+.|++..|..+++++..+++....++..+..++
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555556677888899999999999999999999999999999998866699999999999888888877766
Q ss_pred hhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHH
Q 023063 110 AILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAI 189 (288)
Q Consensus 110 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 189 (288)
.. ..+.+.+..+.+++|+|.|.+.....+.+-|...++ +.|..++.+..++.+..
T Consensus 296 ~~-------------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~------~aG~~mG~WGaaQA~A~ 350 (403)
T PF03209_consen 296 GP-------------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG------RAGLFMGAWGAAQAIAR 350 (403)
T ss_pred Hh-------------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc------chhHHHHHHHHHHHHHH
Confidence 51 225678889999999999999888888888888776 57888888888888877
Q ss_pred HHHHHhHhheee----------ccchhhhhhHhHHHHHHHHHHH
Q 023063 190 LVAVTVLVYIQD----------NIGWGWGLGIPTFAMFLSIIAF 223 (288)
Q Consensus 190 ~i~~~~~~~l~~----------~~g~~~~f~~~~~~~~~~~i~~ 223 (288)
.++..++|.+.| ..+|...|.+-++..++++++.
T Consensus 351 Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 351 GLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 777777776533 1245555665555555554443
No 218
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.60 E-value=2e-06 Score=80.41 Aligned_cols=162 Identities=15% Similarity=0.090 Sum_probs=117.9
Q ss_pred hHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc--cc--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 023063 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY--AG--RFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (288)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~--~G--rr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~ 119 (288)
....|+++++|+++++......+..+-. ..-++.|.++|.+ +| ||+-++++.++..++.+.+.... ..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~~---- 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---AS---- 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---cc----
Confidence 3556888999999999887766665544 4568889999987 34 55566667766655555554432 21
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
..+.....+..++..+|........-+++.|...+++. .++...++.+....+|+.++..+.|.+
T Consensus 83 -----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 83 -----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE----SRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred -----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----hhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 11334445556677888888888999999999876642 478888899999999999999999999
Q ss_pred eeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 200 QDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 200 ~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
.+..+++..|.+.+++..+..+......+
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999998887777666554444443
No 219
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.60 E-value=1.2e-07 Score=85.42 Aligned_cols=180 Identities=11% Similarity=0.057 Sum_probs=121.1
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccc--hhHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG--RFWTITIASIIYQ 100 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G--rr~~i~~~~~l~~ 100 (288)
.++...+...+.+.+.-..-+.++.++.+.+..+.-+.+.......+...++..+.|.++||+ + |......++++..
T Consensus 271 ~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 271 YILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVG 349 (464)
T ss_pred hHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHH
Confidence 444444444445555555567788888888874444888888888899999999999999999 8 5333344444433
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
.......++. ++..+++-....+++.+...+..........+.+...+-...|...++
T Consensus 350 ~~~~~iP~~~----------------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaI 407 (464)
T KOG3764|consen 350 VSSGPIPFAT----------------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAI 407 (464)
T ss_pred HHhchhHhhh----------------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHH
Confidence 3333333333 445555556666677777666666666666655433222258899999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
...+..+|..+||.++|.+.+..|++|.-.+.++.-++-..++..
T Consensus 408 ad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 408 ADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887666555554444333333
No 220
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.52 E-value=4.6e-06 Score=75.58 Aligned_cols=150 Identities=15% Similarity=0.073 Sum_probs=111.4
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~ 108 (288)
+..|+.--.=..+.+++++|+.+..|.+..+++...+.+..+..++..++.++-.|+ -..|.+.+..++..+..+...+
T Consensus 243 l~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l 321 (422)
T COG0738 243 LAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVAL 321 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH
Confidence 344444333334557899999888999999999999999999999999999999987 8888887766554444444444
Q ss_pred HhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 023063 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (288)
Q Consensus 109 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (288)
.. +.+ -..+..+.|+..+.++|++.+...+..+.+. +.++..- ...-+|
T Consensus 322 ~~----------------------g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~t-----s~~s~~l---~maivG 370 (422)
T COG0738 322 IG----------------------GVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHT-----SVGSGLL---VMAIVG 370 (422)
T ss_pred hc----------------------ChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCccc-----cccceee---eeheec
Confidence 33 222 2334567788899999999999999999553 3444332 245679
Q ss_pred HHHHHHhHhheeeccchhhhhh
Q 023063 189 ILVAVTVLVYIQDNIGWGWGLG 210 (288)
Q Consensus 189 ~~i~~~~~~~l~~~~g~~~~f~ 210 (288)
+.+.|.+.|++.|.+|....+.
T Consensus 371 GAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 371 GAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred chHHHHHHHHHHHhhhhHHHHH
Confidence 9999999999999998877665
No 221
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.51 E-value=8.8e-06 Score=69.88 Aligned_cols=146 Identities=19% Similarity=0.265 Sum_probs=104.2
Q ss_pred hhHHHHhHHhcCCCH--HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 023063 43 TNMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~ 120 (288)
...+.+.. +.+.+. ...++......+...++.++.|.++||+ |||+.+..+.....++.+...+..
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 90 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAP---------- 90 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCc----------
Confidence 33444443 444444 4778888888888888889999999999 999888888766555544444433
Q ss_pred CCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCC-CChhhhhhhhhHHHHHHH-HHHHHHHHHHHhHhh
Q 023063 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWYYF-VMGAAILVAVTVLVY 198 (288)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~~~~~ 198 (288)
+ ...+.+.+.+.+.|++.+...+...++++|.++. . +|+...+.... ...+|..+++.+++.
T Consensus 91 ---------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 91 ---------N-VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEAT------ERGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred ---------c-chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchh------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1466777778888999998889999999999987 3 58888887777 577788888766665
Q ss_pred eee--ccchhhhhhHhHHHH
Q 023063 199 IQD--NIGWGWGLGIPTFAM 216 (288)
Q Consensus 199 l~~--~~g~~~~f~~~~~~~ 216 (288)
+.. ..+|+..|.+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 155 LLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHhcchHHHHHHHHHHH
Confidence 443 356777555444433
No 222
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.48 E-value=3.6e-06 Score=79.00 Aligned_cols=168 Identities=18% Similarity=0.140 Sum_probs=114.5
Q ss_pred HHHHHHHHhHHhhh---hhHHHHhHHhcCCCHHH-HHHHHHHH----HHHHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 29 SNEVCEKLAVVGFN---TNMISYLTTQLHMPLTK-AANTLTNF----GGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 29 ~~~~~~~~~~~~~~---~~l~~yl~~~~~~~~~~-~~~~~~~~----~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
...+...++++... .+...+....++.+... .+...... .+...+..++.|.++||+ |||..+.+......
T Consensus 25 ~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~ 103 (463)
T KOG2816|consen 25 PLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTI 103 (463)
T ss_pred HHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHH
Confidence 33444444444333 55555665544443222 22222222 467778899999999999 99999998887777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
+..+...+.. +++++ ..-..-+.+...+...++++|....+ .|...++.
T Consensus 104 l~~~~~~~~~------------------------~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~------~R~~~~gl 152 (463)
T KOG2816|consen 104 LPALCLLFQG------------------------YWFFL-LLGLSGGFSAIFSVGFAYVADISSEE------ERSSSIGL 152 (463)
T ss_pred HhHHHHHHHH------------------------HHHhh-hcccccchhhhhhhhhhheeeccchh------HHHHHHHH
Confidence 7666555422 22222 11112233445677788999998887 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
.+.....+..++|.+++.+....|.-..|.+..+..++..+......+
T Consensus 153 l~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~ 200 (463)
T KOG2816|consen 153 LSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLP 200 (463)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999988889988999988888777765555544
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.47 E-value=9e-06 Score=74.06 Aligned_cols=141 Identities=16% Similarity=0.089 Sum_probs=97.2
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccc-----hhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 023063 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-----RFW-TITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (288)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-----rr~-~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~ 123 (288)
..+++++..-.+..+........ ..+..|+.||++ + ||- -+..|..+...+..+...+...-.- ..+
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~-----~~~ 79 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAE-----SGQ 79 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcc-----ccc
Confidence 35788888888888877776664 689999999998 7 554 4455566666665555543311000 000
Q ss_pred ccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeecc
Q 023063 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (288)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 203 (288)
+. ..+.........+++.+.|+|.+...+...++++|..|++ +|++..++.+...-+|..++..+.+.+.+.+
T Consensus 80 ~~-~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~------~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 80 QS-SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE------RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred cc-ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh------hhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 00 0111112233445566778888888889999999999988 7999999999999999999999998776665
Q ss_pred c
Q 023063 204 G 204 (288)
Q Consensus 204 g 204 (288)
.
T Consensus 153 s 153 (403)
T PF03209_consen 153 S 153 (403)
T ss_pred C
Confidence 4
No 224
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.45 E-value=7.7e-06 Score=77.96 Aligned_cols=178 Identities=14% Similarity=0.036 Sum_probs=111.2
Q ss_pred HHHHHHhHHhhhhhHHHHhHH--hcCCCH------HHHHHHHHHHHHHHhhhHHHH----HHHHHhccchhHHHHHHHHH
Q 023063 31 EVCEKLAVVGFNTNMISYLTT--QLHMPL------TKAANTLTNFGGTGSLTPLIG----AFVADAYAGRFWTITIASII 98 (288)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~--~~~~~~------~~~~~~~~~~~~~~~i~~~~~----G~laDr~~Grr~~i~~~~~l 98 (288)
.+.....+|.+...++.++.. ..+.+. ...+++.+...+...+..++. +++.||. +..+.+.+|+++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 334455666666666666542 111111 113334444444444555555 5556665 667888899999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
..++.+.+......+. .....+.+++....++.++|..+..|...+++.+..|++ .||+.+
T Consensus 360 ~~l~f~~l~~~~~~~~-------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~------~rg~~~ 420 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN-------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR------LMGFIM 420 (500)
T ss_pred HHHHHHHHHHHHHhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH------HHHHHH
Confidence 9999888776652211 001224567778889999999999999999999999998 799999
Q ss_pred HHHHHHHHHHHHHHHHhHhhee----------eccchhhhhhHhHHHHHHHHHHHHHhcc
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQ----------DNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~----------~~~g~~~~f~~~~~~~~~~~i~~~~~~~ 228 (288)
+.+..+..+|+.++..+..... ...++...|...++..++..++++...+
T Consensus 421 g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888887766664221 0113556666665554444444444333
No 225
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.45 E-value=2.6e-05 Score=73.83 Aligned_cols=173 Identities=14% Similarity=0.027 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHH-HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHH
Q 023063 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA-SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (288)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~-~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (288)
.+...++..+...+..|+-|.++|+. |+||.++.. ..+..++++++.+.. +++++...
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--------------------~~~~~~~~ 130 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--------------------PGQWWLAL 130 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--------------------cchHHHHH
Confidence 35667788888889999999999998 766655544 455555666555533 22444444
Q ss_pred HHHHHHHHhccCcchhhhhhhhcccCCCChhhh--------------------hhhhhHHHHHHHHHHHHHHHHHHhHhh
Q 023063 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQA--------------------TKTWKYFNWYYFVMGAAILVAVTVLVY 198 (288)
Q Consensus 139 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~g~~i~~~~~~~ 198 (288)
+..++..++.+.......+++.|..++++.... ..|++..+.-+..+++|+.+...+.-.
T Consensus 131 ~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~ 210 (477)
T PF11700_consen 131 VLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL 210 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 444555677777778889999999887742000 012777777777778888877766543
Q ss_pred eeec--------cchhhhhhHhHHHHHHHHHHHHHhccceee---cCCCCChhhHHHHHHHHHHHh
Q 023063 199 IQDN--------IGWGWGLGIPTFAMFLSIIAFLIGYPLYRN---LDPAGSPFTRLLQVCVAAFRK 253 (288)
Q Consensus 199 l~~~--------~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 253 (288)
+... .+.|..+.+.++..++..+..++..++.+. .++..+..+.-.+-+++.+|+
T Consensus 211 ~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~ 276 (477)
T PF11700_consen 211 LVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE 276 (477)
T ss_pred HHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 3211 123555655555544433333333333222 222223334444555555554
No 226
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.44 E-value=4.8e-06 Score=79.14 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=97.8
Q ss_pred HHHhHHhhhhhHHHHhHHhcCCCHH----HHHHHHHHHHHHHhhhHHHHHHHHHhccchhH-------HHHHHHHHHHHH
Q 023063 34 EKLAVVGFNTNMISYLTTQLHMPLT----KAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-------TITIASIIYQIG 102 (288)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~-------~i~~~~~l~~i~ 102 (288)
....+......++.|.++..+.+.. ...++.+...+...+..|+.|++.||. |+|+ -+.+|+++..++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHH
Confidence 3344444446677777643222110 123333444455667778889999998 9886 367777777777
Q ss_pred HHHHHHHhh-cCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 103 MICLTISAI-LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 103 ~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
.+....... ... .....+.+++....++.++|.++..+...+++.+..|++ .++.+++.+
T Consensus 360 ~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~------~~g~~~g~~ 420 (489)
T PRK10207 360 FLTAAAAGMWFAD-------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH------LMGFILGMW 420 (489)
T ss_pred HHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH------HHHHHHHHH
Confidence 654432110 000 001224566677788999999999999999999999987 699999999
Q ss_pred HHHHHHHHHHHHHhHhhe
Q 023063 182 YFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l 199 (288)
+...++|+.++..++...
T Consensus 421 ~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999988777544
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.41 E-value=8.8e-07 Score=83.70 Aligned_cols=148 Identities=8% Similarity=-0.149 Sum_probs=108.6
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccc
Q 023063 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEA 129 (288)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 129 (288)
++.+|+++.+.|.+..+..++..++..+.+++.+|+ +.|+++.++.++..++.+...+...-+....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~------------ 346 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAF------------ 346 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccccc------------
Confidence 457899999999999999999999999999999987 9999999999888887755432110000000
Q ss_pred ccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccc-----
Q 023063 130 NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG----- 204 (288)
Q Consensus 130 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g----- 204 (288)
.....+.+....++.+++.+........++.+..|++ ..++.++......++|..+++.+++.+.+..|
T Consensus 347 gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~------~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~ 420 (468)
T TIGR00788 347 GISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG------CESSVFALLASILHLGSSVSGFLGVLLMETIGITCDN 420 (468)
T ss_pred CCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC------ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 0001222333445667777777777889999999988 68999999999999999999999998888777
Q ss_pred hhhhhhHhHHHH
Q 023063 205 WGWGLGIPTFAM 216 (288)
Q Consensus 205 ~~~~f~~~~~~~ 216 (288)
++.-+.+..+..
T Consensus 421 ~~~~~~~i~i~~ 432 (468)
T TIGR00788 421 SNNLWLLILGHS 432 (468)
T ss_pred ccchHHHHHHHH
Confidence 555444443333
No 228
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.36 E-value=5.4e-06 Score=58.19 Aligned_cols=67 Identities=18% Similarity=0.109 Sum_probs=55.8
Q ss_pred HHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHH
Q 023063 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (288)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l 98 (288)
..++...+.-.+.++++.|+++ .|+++.+.+.+.++..+...+++++.|+++||+ ||++.++....+
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 3444445555667889999974 899999999999999999999999999999998 998888776544
No 229
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.17 E-value=8e-05 Score=70.34 Aligned_cols=205 Identities=10% Similarity=-0.031 Sum_probs=133.6
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHH-hcCCCHH------H----HHHHHHHHHHHHhhhHHHHHHHHHhccc
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLT------K----AANTLTNFGGTGSLTPLIGAFVADAYAG 87 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~------~----~~~~~~~~~~~~~i~~~~~G~laDr~~G 87 (288)
+-++.++.+..+.++.=++++.+..+...|..+ .++-++. + ..+....+.+...+..++--++.+++ |
T Consensus 255 ~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~-g 333 (477)
T TIGR01301 255 YLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW-G 333 (477)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 345788888889999888888888888888764 4443221 1 12333344444456666677788887 8
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 023063 88 R-FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (288)
Q Consensus 88 r-r~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (288)
+ |++..++.++..++.+...+....++-.. ..+..+.--.++.+..+..++...+.|+..+.....-.+++++..+++
T Consensus 334 ~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 334 AGKRLWGIVNIILAICLAATVLVTYVAKNSR-YYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhccc-cccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 5 66668887888888777765442111000 000000000112222455666677889999999999999999999854
Q ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccc--hhhhhhHhHHHHHHHHHHHHHhccc
Q 023063 167 DPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG--WGWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g--~~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
+. +.|..++++|.+..+...+..+..|.+.+.+| -...+.+.++..+++.+..+...|+
T Consensus 413 ~~----~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 413 GA----GQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred CC----CCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 21 57999999999999999998887777555444 3456777777777777666665554
No 230
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.14 E-value=8.7e-05 Score=70.93 Aligned_cols=150 Identities=13% Similarity=0.026 Sum_probs=83.1
Q ss_pred CcchHHHHHHHHHHH-HHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHH
Q 023063 20 GMITMPFIFSNEVCE-KLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l 98 (288)
.++..........++ ..++..+..+.+..+ +.-|.+... .+...+..+...++..++.++.||+ |||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 334444334444444 344444444455554 445665433 4455556667777778889999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHH-HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 99 ~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
+.++.++++.......... .+ .....++..+.. +.......+..++.+.+.+|.+|.+ .|+..
T Consensus 369 m~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~------~r~~~ 432 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYP-------NS---SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLR------LRSKG 432 (513)
T ss_pred HHHHHHHHHHHHHHhccCC-------Cc---ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHh------HHhhh
Confidence 9999988886542111000 00 001112222222 2222222233345556889999998 57776
Q ss_pred HHHHHHHHHHH
Q 023063 178 FNWYYFVMGAA 188 (288)
Q Consensus 178 ~~~~~~~~~~g 188 (288)
.+.-.....+.
T Consensus 433 ~s~~~~~n~~~ 443 (513)
T KOG0254|consen 433 ASLAVAVNWLW 443 (513)
T ss_pred HHHHHHHHHHH
Confidence 66544433333
No 231
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.11 E-value=1e-08 Score=95.73 Aligned_cols=184 Identities=15% Similarity=0.080 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
.....+....+..+..+....+...++.+..+.+.. ........+...++.+++.++.||+ |||+.++.+..+..++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 333333444444343333333444444455666655 2223344455666777788999998 9999999998887777
Q ss_pred HHHHH-HHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhcc-CcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 103 MICLT-ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSG-GIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 103 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
.+.+. .....+.- +...+.. ..+...+..++.+ +..+....+.+|.+|++ .|++..+.
T Consensus 330 ~~~~~~~~~~~~~~-------------~~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~------~R~~~~~~ 389 (451)
T PF00083_consen 330 SLILGIIFFLGVSS-------------SSWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTK------VRSTGIGL 389 (451)
T ss_pred cccccccccccccc-------------ccccccc-cceeeeecccccccccccccccccccccccc------cccccccc
Confidence 76664 11100000 0000111 1111222222222 33455568889999998 59999999
Q ss_pred HHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhccc
Q 023063 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 229 (288)
.+....+++.+++.+...+.+..+-...+.+.+++.++..+..+...|+
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 8888889999999888887776663344555444444444444333333
No 232
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.00 E-value=3.2e-05 Score=72.55 Aligned_cols=170 Identities=9% Similarity=-0.040 Sum_probs=123.0
Q ss_pred HHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 023063 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (288)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~ 107 (288)
++..++..++.-.+.+++--+++ +.+-.+..-|........+-.+.-++.+++-.++ |+-+++.+++....+=.+...
T Consensus 377 f~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S 454 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYS 454 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHH
Confidence 34444455555555555655554 4454444444444444455566777889999998 999999999988887777777
Q ss_pred HHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH-HHH
Q 023063 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMG 186 (288)
Q Consensus 108 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (288)
... ++|..+..-+++|+-.+.++.++.+|+++..|++ -+..+.++... ...
T Consensus 455 ~L~----------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~------l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 455 YLQ----------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPG------LRATAQGLLQGIFHG 506 (618)
T ss_pred Hhc----------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc------chHHHHHHHHHHhcc
Confidence 666 6777777778999999999999999999999998 46666665443 356
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~~~ 227 (288)
+|-.+|.+++|.+...+|-+..|.+.++..++.++.+....
T Consensus 507 lG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred cCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 77778888888888888888888887777766666555543
No 233
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.97 E-value=0.00064 Score=65.68 Aligned_cols=152 Identities=8% Similarity=0.025 Sum_probs=98.3
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHH---HHHHHHHHHHHHHhhhHHHHHHHHHhccchh-HHHHH
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADAYAGRF-WTITI 94 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr-~~i~~ 94 (288)
++.|.+...+++.+...+.||+...+.|......++-+.. ..++......++..++..+.|.+.-+. +|- +.+++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHH
Confidence 3446677777788888888888888888887777766553 566777777777888888889998776 664 45556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhh
Q 023063 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (288)
Q Consensus 95 ~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (288)
+.+++.++.-.+.... +++.+ ..+...++.++|.|...........-..|++ ..
T Consensus 386 ~~~~~ta~~Gama~~~------------------~~n~~--~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~------~i 439 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAVR------------------PDNKN--AAIAFLVLAGFGIGGILVPAIVIAQLIVPDE------DI 439 (599)
T ss_pred HHHHHHHHHHHHHHcc------------------CCCcc--hHHHHHHHHHHhHHHHHHHHHHeeEeeeCch------HH
Confidence 6666555444333222 12222 2334456777777776555444443344544 57
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHh
Q 023063 175 WKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 175 ~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
+.+.+.......+|+.++..+..
T Consensus 440 g~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 440 GTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHH
Confidence 88887777777777777776643
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.96 E-value=0.00031 Score=56.20 Aligned_cols=110 Identities=13% Similarity=0.198 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHH
Q 023063 57 LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAI 136 (288)
Q Consensus 57 ~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 136 (288)
+........+......+++++...+.+++ |.|++++++.+.+.+-....... +.+.
T Consensus 36 ~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~~-----------------------~~~~ 91 (156)
T PF05978_consen 36 AGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFYP-----------------------NSYT 91 (156)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhh-----------------------hHHH
Confidence 33334445566677778888888899997 99999999998777655443321 4567
Q ss_pred HHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhH
Q 023063 137 LYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (288)
Q Consensus 137 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 196 (288)
++.+-++.|+|.+..+.....++.+..+++ .+++-.+++....+.+..+|.++.
T Consensus 92 l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~------~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 92 LYPASALLGFGAALLWTAQGTYLTSYSTEE------TIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHHHHHhhhhHHhhHhhhHHHHHcCCHH------HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 788888999999999999999999877665 577777776666666666555443
No 235
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.95 E-value=0.00099 Score=62.80 Aligned_cols=167 Identities=8% Similarity=0.008 Sum_probs=95.1
Q ss_pred cchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCC-----CHHHHHHHHHHHHHHHhhh-HHHHHHHHHhccchhHHHHH
Q 023063 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHM-----PLTKAANTLTNFGGTGSLT-PLIGAFVADAYAGRFWTITI 94 (288)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~-----~~~~~~~~~~~~~~~~~i~-~~~~G~laDr~~Grr~~i~~ 94 (288)
+++++.+.+..||..+.|+...+ +++.+.+ +.....++-+...+.+.+. .++.+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 45566566666666666654433 3444444 3345555655554544444 78899999998 99998888
Q ss_pred HHHHHHHHHHHHHHHhhcCC--CCCCCCCCcccc-cccccc-------hHHHHHHHHHHHHHhccCcch-hhhhhhhccc
Q 023063 95 ASIIYQIGMICLTISAILPQ--LRPPPCEGEQVC-QEANKG-------QVAILYVSLLLAALGSGGIRP-CVVAFGADQF 163 (288)
Q Consensus 95 ~~~l~~i~~~~~~~~~~~p~--~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~l~g~g~g~~~~-~~~~~~~~~~ 163 (288)
....+..-.+++.+.. +|. ..++.-.-+... ..+.+. +.|...+..+...+-.....+ .-++++.|.+
T Consensus 80 ~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 80 VISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7776666666655543 222 111000000000 000000 011111111111111112222 5688999999
Q ss_pred CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 164 DETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
..+ +-.|.++.+..+.|+|..+++.+..++.
T Consensus 159 t~~------qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 159 TID------EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887 6899999999999999999998887765
No 236
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.93 E-value=1.5e-05 Score=73.40 Aligned_cols=179 Identities=16% Similarity=0.071 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHH--------HHHHHHHHHHh-hhHHHHHHHHHhccchhHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAA--------NTLTNFGGTGS-LTPLIGAFVADAYAGRFWTIT 93 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~--------~~~~~~~~~~~-i~~~~~G~laDr~~Grr~~i~ 93 (288)
.++.....-|+..+++|+...+...-++ ..|+.+++.. ....+...+.. .+-.++..+.|++ |||+..+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq~ 382 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQL 382 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHHH
Confidence 3444445556667777777665555444 3454333222 22223333333 3666778889998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhh
Q 023063 94 IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (288)
Q Consensus 94 ~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
.+..++.+..+.+....+- . . + ....+....+.+.++.-+.+.....+.+|.||++ .
T Consensus 383 ~GF~~~~i~~~~~~~~y~~--~------------~-~--~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar------v 439 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAGPYNQ--L------------E-N--TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR------V 439 (538)
T ss_pred hhHHHHHHHHHHHcCCccc--c------------c-c--cCceeehHHHHHHHHhcCCCceeEEeehhhchHH------H
Confidence 9999888877666654310 0 0 1 1222222233445666667777788889999998 6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHhheee-----ccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 174 TWKYFNWYYFVMGAAILVAVTVLVYIQD-----NIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 174 ~~~~~~~~~~~~~~g~~i~~~~~~~l~~-----~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
|+...++.....-+|+.++.....++.+ ..|.+..+++.+.+..++.+..++.
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 9999999999999999999999999888 6778888888887776666554443
No 237
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.91 E-value=0.00038 Score=63.77 Aligned_cols=128 Identities=13% Similarity=-0.049 Sum_probs=87.2
Q ss_pred hhhHHHHhHHhcCC---CHH----HHHHHHHHHHHHHhhhHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 023063 42 NTNMISYLTTQLHM---PLT----KAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTITIASIIYQIGMICLTISAILP 113 (288)
Q Consensus 42 ~~~l~~yl~~~~~~---~~~----~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~~i~~~~~l~~i~~~~~~~~~~~p 113 (288)
+.++|.|+++..+. ++. -.+...++..+...+..|+-|-++|.. |+ |+.+-+..++.++.++.++...
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~--- 110 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP--- 110 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC---
Confidence 45678888876543 332 335566777778888889999999998 75 5566666677777777776655
Q ss_pred CCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 023063 114 QLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (288)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 193 (288)
+...++...+..++..++....+....+++.+..+++ +.++..+.-+-...+|+.+.-
T Consensus 111 ----------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~------~~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 111 ----------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKD------NMGRISGLGWALGYLGSVILL 168 (438)
T ss_pred ----------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCcc------ccCcccccccccccccchHHH
Confidence 2235555566667788999888889999999998886 355555444444556665544
Q ss_pred Hh
Q 023063 194 TV 195 (288)
Q Consensus 194 ~~ 195 (288)
++
T Consensus 169 i~ 170 (438)
T COG2270 169 IF 170 (438)
T ss_pred HH
Confidence 44
No 238
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.90 E-value=2.7e-05 Score=71.68 Aligned_cols=167 Identities=13% Similarity=0.110 Sum_probs=118.2
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhc---cchhHHHHH-HHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTITI-ASI 97 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Grr~~i~~-~~~ 97 (288)
+.+..+..+.+...+++..=.++++.|++ ..|.+.+-.+.+....-+.+.+.+|+.|..+||. +||||-.+. +..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 55666666677777887777889999997 5799999888888888889999999999999965 588775544 455
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
...++.++...+..+-... |++...| ...-...++.++..+.=+.........-++.+|....++ +..++
T Consensus 111 ~i~~~l~Lig~aaDig~~l---gd~~~~~--~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~~A 180 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL---GDNERKP--VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKTRA 180 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh---cCCcccc--cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhhcc
Confidence 6666666655544221110 1111111 111245667777778888888888899999999987764 23337
Q ss_pred HHHHHHHHHHHHHHHHHhHhhe
Q 023063 178 FNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 178 ~~~~~~~~~~g~~i~~~~~~~l 199 (288)
.+++.....+|+.+++..++++
T Consensus 181 ns~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 181 NSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred chhHHHHHHhcceeeeeccccc
Confidence 8888888999999988877654
No 239
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.86 E-value=0.00032 Score=68.86 Aligned_cols=83 Identities=18% Similarity=0.209 Sum_probs=68.5
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhccc--hhHHHHHHHHH
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAG--RFWTITIASII 98 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~G--rr~~i~~~~~l 98 (288)
+.++...+..++....++++..++|.|+++++|+++.+++++.....+ +..++.+++|++.||+ + .|+.+.+++++
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL 408 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence 456667778888899999999999999999999999999999887665 5678999999999998 7 55777777766
Q ss_pred HHHHHHH
Q 023063 99 YQIGMIC 105 (288)
Q Consensus 99 ~~i~~~~ 105 (288)
.+++.++
T Consensus 409 ~~~~~~~ 415 (633)
T TIGR00805 409 STLSYLL 415 (633)
T ss_pred HHHHHHH
Confidence 6666544
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=97.86 E-value=0.00023 Score=68.84 Aligned_cols=174 Identities=13% Similarity=0.043 Sum_probs=114.9
Q ss_pred chHHHHHHHHHHHHHhHHhhhhhHHHHhHHhc-CC-CHHHHHH-HHHHHHHHHhhhHHHHHHHHHhccchhH--------
Q 023063 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL-HM-PLTKAAN-TLTNFGGTGSLTPLIGAFVADAYAGRFW-------- 90 (288)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-~~-~~~~~~~-~~~~~~~~~~i~~~~~G~laDr~~Grr~-------- 90 (288)
..+|+++...+|..-+-..+..|+ .++-+.+ |. ...+... .++...+..++|.+.+|.++... -||+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~-~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~-~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNA-RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS-QKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecH-HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH-Hhhccccccchh
Confidence 578888877777655444443333 4555666 66 2232222 78889999999999999987322 3332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhh
Q 023063 91 TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQ 170 (288)
Q Consensus 91 ~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 170 (288)
..+....++.++.+++++.. ....++++.++.|++.|..++...+..+|.|. +
T Consensus 431 ~~l~~~~~~~~~~lll~~~~----------------------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k---- 483 (591)
T PTZ00207 431 IALFIPSVCIITMLTLFLTL----------------------PKAALPLPYFIAAFANGFMAATIALVTRTIFA-K---- 483 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHC----------------------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-c----
Confidence 22222233555555555543 12467888999999999999999999999999 5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHH-HHhHhheeecc----------c---hhhhhhHhHHHHHHHHHHHHHh
Q 023063 171 ATKTWKYFNWYYFVMGAAILVA-VTVLVYIQDNI----------G---WGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 171 ~~~~~~~~~~~~~~~~~g~~i~-~~~~~~l~~~~----------g---~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
..|+-++....+..+|+.+- ..+.|.+.+.- | ++.+|.+.+++..++.+.-...
T Consensus 484 --~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 484 --DPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred --chHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 38888888888888888775 34455543321 2 6677877777666666554443
No 241
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.85 E-value=8.7e-07 Score=76.79 Aligned_cols=134 Identities=12% Similarity=0.139 Sum_probs=108.7
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 023063 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (288)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~ 124 (288)
+-++.+.+.+.+.++..++.++++.-..+.+.++|++.||.+|-|+..++-+.+..+|-+.++.-..
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi------------- 132 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI------------- 132 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-------------
Confidence 4456666667777788888899999999999999999999999998777777777788877764331
Q ss_pred cccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeecc
Q 023063 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (288)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 203 (288)
....|.+.++|++.|+|.-......+.|..-+|..+ +.+.+++.......+|+.+-..+.+++.+..
T Consensus 133 ------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGK------ELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 133 ------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGK------ELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred ------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCc------cccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 116788999999999999988888899999999887 6999999988888888887776777665543
No 242
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.64 E-value=0.00015 Score=64.82 Aligned_cols=87 Identities=9% Similarity=-0.136 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeec----------
Q 023063 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN---------- 202 (288)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~---------- 202 (288)
++..+.++.++.|.|.+...+..++++++..+++ ++++..++.+....+|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~------~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIE------TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc------hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 6788899999999999999999999999999887 588889999999999999999999866522
Q ss_pred ------cchhhhhhHhHHHHHHHHHHHHH
Q 023063 203 ------IGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 203 ------~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
..|+.+|++.+++.++..+.+..
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788887665555444444333
No 243
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=0.00049 Score=63.49 Aligned_cols=157 Identities=14% Similarity=0.054 Sum_probs=94.8
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 023063 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (288)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 131 (288)
.-|++...+|.+.....+.+.++..+.|.++||.-.-|.++++......++.+.+......+.
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~----------------- 357 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLG----------------- 357 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCC-----------------
Confidence 457888899999999999999999999999999833345555555555555433222221111
Q ss_pred chHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccc----hhh
Q 023063 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG----WGW 207 (288)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g----~~~ 207 (288)
..+.++....+.|+...+..|+-.-+..|..-+.. -+...|..+...++-+.+-..+.+...+..+ +..
T Consensus 358 -~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~ 430 (480)
T KOG2563|consen 358 -DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFP 430 (480)
T ss_pred -ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------CcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCcc
Confidence 23344555566677777777777777777664432 2333444445555555555556666555555 333
Q ss_pred hhhHhHHHHHHHHHHHHHhccceee
Q 023063 208 GLGIPTFAMFLSIIAFLIGYPLYRN 232 (288)
Q Consensus 208 ~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (288)
.-+.......+.+++..+.++.+++
T Consensus 431 ~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 431 ANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred chhHhHHHHHHHHHHHhhhhhhHHh
Confidence 3444445555555666666655433
No 244
>PRK03612 spermidine synthase; Provisional
Probab=97.56 E-value=0.012 Score=56.37 Aligned_cols=156 Identities=10% Similarity=-0.015 Sum_probs=84.2
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHH-HHHHHHHHHHHHH-HH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQIGMI-CL 106 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~-i~~~~~l~~i~~~-~~ 106 (288)
.+.++..++.-..-....-.+...+|.+....+.+++++..+..+|..++|+++++. -|+.. +.++..+....+. ++
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455444555555666667889999999999999999999999988887544 22221 1111111111111 11
Q ss_pred HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 023063 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (288)
Q Consensus 107 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (288)
.....+ .......++...++.++..|+..|....+..+.... +.++..+-.|....
T Consensus 100 ~~~~~~-----------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~-------~~g~~~g~ly~~nt 155 (521)
T PRK03612 100 YAAFAF-----------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ-------HLGHNVATVLAADY 155 (521)
T ss_pred HHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------chhhhhhhhHhHHh
Confidence 111100 000111222333445666676666655544432221 24555667777788
Q ss_pred HHHHHHHHhHhhe-eeccchhhhh
Q 023063 187 AAILVAVTVLVYI-QDNIGWGWGL 209 (288)
Q Consensus 187 ~g~~i~~~~~~~l-~~~~g~~~~f 209 (288)
+|+.+|.++.+++ ....|-....
T Consensus 156 lGa~~G~l~~~~vLlp~lG~~~t~ 179 (521)
T PRK03612 156 LGALVGGLAFPFLLLPRLGLIRTA 179 (521)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHH
Confidence 8888888877743 4456644333
No 245
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.51 E-value=0.0074 Score=57.67 Aligned_cols=121 Identities=8% Similarity=0.011 Sum_probs=82.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 023063 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (288)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 130 (288)
..+|.+......+... .........+.+.|+. |||.....+..+..++.+...... .
T Consensus 346 ~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~-------------------~ 402 (521)
T KOG0255|consen 346 SGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLP-------------------D 402 (521)
T ss_pred hhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhh-------------------c
Confidence 3455544443333322 4444555568899998 999999999999999888887755 1
Q ss_pred cchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
....++..+...+...+.+........+.+|.+|+. .|..+.+.......+|++++|.+.....
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~------~r~~~~~~~~~~~~~~~i~ap~~~~~~~ 466 (521)
T KOG0255|consen 403 DLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV------VRNTAVGAISAAARLGSILAPLFPLLLR 466 (521)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111112233333334444455556688999999998 6999999999999999999998765443
No 246
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.47 E-value=0.0074 Score=55.72 Aligned_cols=155 Identities=11% Similarity=0.035 Sum_probs=101.5
Q ss_pred hhhHHHHhHHh-cCCCHHHHHH-HHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 023063 42 NTNMISYLTTQ-LHMPLTKAAN-TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (288)
Q Consensus 42 ~~~l~~yl~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~ 119 (288)
-+++..|+.+. .|++..+... +.-+..-......++...+.|.. |-|++++++.+...+...++....
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 37788999887 8999998764 33344445556667788999998 999999999888777777766655
Q ss_pred CCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+...+-+.-++.|++.+. .....+|+--..|++ +.-++.+....+.-+|..++.+++-.+
T Consensus 93 -------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~------~yq~vts~~raa~l~g~~~s~~lgQll 152 (412)
T PF01770_consen 93 -------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKE------HYQKVTSYTRAATLVGRFISSLLGQLL 152 (412)
T ss_pred -------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666666666553 233344444444443 566677766666666666666665544
Q ss_pred ee--ccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 200 QD--NIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 200 ~~--~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.. ...+.....+......++++..++.
T Consensus 153 vs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 153 VSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 33 3345666667766666666554443
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.45 E-value=0.0023 Score=45.51 Aligned_cols=73 Identities=4% Similarity=0.024 Sum_probs=61.3
Q ss_pred HhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
++-+.+++.+ +.++++.++|..+++++.+...+++.++.+...++.++. .+++.+..+.++..+.++.+.+..
T Consensus 6 igRFayTplL-P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 6 IGRFAYTPLL-PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHHHhHh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455544 566778899999999999999999999999999999987 888999999999888888888765
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.44 E-value=0.002 Score=60.78 Aligned_cols=128 Identities=13% Similarity=0.158 Sum_probs=104.7
Q ss_pred hHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 023063 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (288)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~ 123 (288)
.++.|+...++|+..+.+...+.......++..+...+--+.+|-|+.+.+|+..-.+.....++..
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~------------- 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT------------- 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc-------------
Confidence 4467888899999999999999999999999998874444445999999999999999999998877
Q ss_pred ccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
+.|.++.+.++.+ ..+...+...++.+.+..++ ++|+.+++......+.+.++|.+-+.+.
T Consensus 330 ---------~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~------e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 ---------ETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPE------EQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred ---------cchhhhHHHHHHH-hhcchhHHHHhHHHhhcccc------cccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 5666666665544 44566788888888888887 6999999999999999999998877553
No 249
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.44 E-value=0.0086 Score=56.94 Aligned_cols=120 Identities=13% Similarity=0.002 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhccchh-H------HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccc
Q 023063 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRF-W------TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKG 132 (288)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~G~laDr~~Grr-~------~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 132 (288)
.++..+...+...+..|+.+++=.|. +|| | =+-+|+++..++.+.+.+......- ....
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~-------------~~~~ 375 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAM-------------YGHS 375 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC-------------CCCc
Confidence 44555556666666677777775554 332 1 2566777888887777665421110 0113
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH-HHHHHHHHHHhHhhe
Q 023063 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MGAAILVAVTVLVYI 199 (288)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~~~~~~~l 199 (288)
+.+++++..++.++|.-+..|...+++++..|++ -++..++.++.. ..+|..++..+.+..
T Consensus 376 s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~------~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 376 SLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG------VTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666778888899999999999999999999988 699999988774 367777777666654
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.0029 Score=57.40 Aligned_cols=151 Identities=12% Similarity=0.112 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHh-HHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccch-hHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTITIASIIYQ 100 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-r~~i~~~~~l~~ 100 (288)
.++..+....+.....|....+.+.++ .+.+|+++.|.|-......+.+.+.+..-....||..|. +-.+..++.++.
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 455555554444444444445555555 457899999999888888888888888778888887433 334444444444
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 023063 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (288)
Q Consensus 101 i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
-..++..... ....++++..+..+..+...+++..++....|.+ +||...|+
T Consensus 341 P~~llls~~~----------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~------qrG~~~Gi 392 (451)
T KOG2615|consen 341 PAFLLLSLAR----------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQS------QRGTLNGI 392 (451)
T ss_pred HHHHHHhccc----------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcc------cchHHHHH
Confidence 4444443333 3456778888888888888899999999988887 69999999
Q ss_pred HHHHHHHHHHHHHHhHhheee
Q 023063 181 YYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 181 ~~~~~~~g~~i~~~~~~~l~~ 201 (288)
......++=++||.+.|.+..
T Consensus 393 ~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 393 FRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHHhhhhhhheeEE
Confidence 999999999999999987654
No 251
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.18 E-value=0.00038 Score=60.26 Aligned_cols=100 Identities=19% Similarity=0.173 Sum_probs=70.0
Q ss_pred hhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 023063 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (288)
Q Consensus 42 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~ 121 (288)
+.....|+-+.+++...+.+.+.........+...+.|-|+|+. |||+.-. .+.+.+++..+..+.|+
T Consensus 56 QgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracv----tycitYiLsCiTKhSpq------- 123 (454)
T KOG4332|consen 56 QGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACV----TYCITYILSCITKHSPQ------- 123 (454)
T ss_pred cCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-cccccee----eehHHHHHHHHhhcCCc-------
Confidence 34455677788899999988876666666667778889999998 9999654 44455566666654443
Q ss_pred CcccccccccchHHHHHHHHHHHHHhccCcchhhhh-hhhcccCC
Q 023063 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVA-FGADQFDE 165 (288)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~ 165 (288)
+-++.++|++-|+..+...+.--+ +++|.-++
T Consensus 124 ------------YkVLmVGR~LGGiaTsLLFSaFEsWliaEHnek 156 (454)
T KOG4332|consen 124 ------------YKVLMVGRVLGGIATSLLFSAFESWLIAEHNEK 156 (454)
T ss_pred ------------eEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhc
Confidence 445778999999888776655544 45565433
No 252
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.025 Score=53.04 Aligned_cols=104 Identities=11% Similarity=0.158 Sum_probs=80.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHH
Q 023063 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLL 143 (288)
Q Consensus 64 ~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (288)
..+......+++++++.+.|+. |.|+.+.++...+.+-.+.+... |.+..+++-.+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-----------------------N~y~~yfssal 111 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-----------------------NSYYLYFSSAL 111 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-----------------------chHHHHHHHHH
Confidence 5666777788899999999998 99999999998877766655542 35667888889
Q ss_pred HHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 144 AALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 144 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
.|+|.+..+.....+++|..+++ ...+-.+........+.++|..+..
T Consensus 112 lG~Gaallw~GqG~ylt~~st~~------tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 112 LGFGAALLWTGQGGYLTSNSTRE------TIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred hhhhHHheecccceehhhcCChh------hHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 99999999999999999988876 4666666655555566655554433
No 253
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.80 E-value=0.0026 Score=59.79 Aligned_cols=201 Identities=9% Similarity=0.005 Sum_probs=119.5
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHH----HHHHhhhHHHHHHHH-HhccchhHHH
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNF----GGTGSLTPLIGAFVA-DAYAGRFWTI 92 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~G~la-Dr~~Grr~~i 92 (288)
+..|+..+.++.+.+..++.+..+.+-.+.+....++++..++-...+.. .+......+..+... -++ .+|+.+
T Consensus 258 ~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i-~~r~~~ 336 (488)
T KOG2325|consen 258 KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKI-DKRRII 336 (488)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhh-ccceee
Confidence 34677888888888888888877666666666667787766654433332 222222222222222 122 345555
Q ss_pred HHHHHHHHHHHHHHHHHh-----hcCCCC--CCCC--CCcccccccccchHHHHHHHH-HHHHHhccCcchhhhhhhhcc
Q 023063 93 TIASIIYQIGMICLTISA-----ILPQLR--PPPC--EGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQ 162 (288)
Q Consensus 93 ~~~~~l~~i~~~~~~~~~-----~~p~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~ 162 (288)
+.+.++...........- .++.+. ...| +++.-|+.....+.+.+++.. ++.|.+.-.+.....++-+|+
T Consensus 337 ~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySki 416 (488)
T KOG2325|consen 337 LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKI 416 (488)
T ss_pred eehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHH
Confidence 555433333333222110 000011 1223 245667766666777666664 445666666677788889999
Q ss_pred cCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 023063 163 FDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~~~~ 225 (288)
..+. ..+...+.+.....++..++|++........|.++.+.+..+..++.......
T Consensus 417 Lgp~------~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~ 473 (488)
T KOG2325|consen 417 LGPR------DQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIV 473 (488)
T ss_pred hCCc------cccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 9887 47777888888889999999998888777788887666665555544443333
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.64 E-value=0.053 Score=51.00 Aligned_cols=147 Identities=16% Similarity=0.033 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhccchh-------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccch
Q 023063 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRF-------WTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (288)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr-------~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 133 (288)
.+..+...+...+..|+..++--+. +++ .-+-+++.++..+.+.+......-. ..++..+
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~------------~~~~~~s 393 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG------------GPSGLVS 393 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc------------CCCCCcC
Confidence 3444555555566667777776664 433 2345556666666666655420000 0023457
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhh------eeeccchhh
Q 023063 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY------IQDNIGWGW 207 (288)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~------l~~~~g~~~ 207 (288)
.++++.+.+++++|.=+..++..++++...|+. -.+..++.+......|..++..+.+. ..+......
T Consensus 394 ~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~------~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~ 467 (498)
T COG3104 394 VWWLVLSYVLQSFGELFISPVGLSMVTKLAPPA------LKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGR 467 (498)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhh
Confidence 888889999999999999999999999999986 57888888888888888877766653 112223445
Q ss_pred hhhHhHHHHHHHHHHHHHh
Q 023063 208 GLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 208 ~f~~~~~~~~~~~i~~~~~ 226 (288)
.|+..+...++..+.....
T Consensus 468 ~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 468 VFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 5666655554444443333
No 255
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.63 E-value=0.16 Score=47.59 Aligned_cols=136 Identities=12% Similarity=0.018 Sum_probs=103.3
Q ss_pred hhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 023063 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (288)
Q Consensus 41 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~ 120 (288)
+-..+..|+..+ |+++...+..-+...+.+..+..+..++.+|+ |.-|+=+++...-.+...+...+...|.-
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~----- 349 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGS----- 349 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCC-----
Confidence 345578899876 99999999999999999999999999999998 99998888887766666555554432221
Q ss_pred CCccccccc-ccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 121 EGEQVCQEA-NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 121 ~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
+ ...+...++.+.++.=+|.=++-.+...++-|..|++ +||...+..+...++..++...+.-
T Consensus 350 --------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~------~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 350 --------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES------ERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred --------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH------HhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1224555666666666777677778888888888876 7999999998888888888776644
No 256
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.36 E-value=0.15 Score=46.66 Aligned_cols=162 Identities=14% Similarity=0.093 Sum_probs=93.7
Q ss_pred ccCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH-----hccchhHH
Q 023063 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD-----AYAGRFWT 91 (288)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD-----r~~Grr~~ 91 (288)
.++..+.+..++++...+..- ++....+|..++ ..|.|-++.+.....+.= +-.-+++..+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhh-ccccc
Confidence 345667787777777777654 456666676665 568887776654333221 112346777888 76 99997
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhh
Q 023063 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (288)
Q Consensus 92 i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 171 (288)
-++-+ -+.+|.++..++. |+++--.......+.......+++.-++.+..-..+-...-.+..++
T Consensus 101 Wvvp~-q~llG~~mllLs~---------~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e----- 165 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSY---------LVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRE----- 165 (510)
T ss_pred eeeeh-HHHHHHHHHHHhh---------CCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHh-----
Confidence 66543 4455666665555 22221111111112233333444555555555555555555556555
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 172 TKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+.|=+......+.+.|.+++..+.-.+
T Consensus 166 -~lgyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 166 -NLGYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred -hcCchhHHHHHHHhhhHHhhcceeeEe
Confidence 577777777778888888887664433
No 257
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.24 E-value=0.2 Score=49.58 Aligned_cols=81 Identities=16% Similarity=0.257 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhc-cchhHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAY-AGRFWTITIASIIYQ 100 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~-~Grr~~i~~~~~l~~ 100 (288)
......+...++...+-+..+++|-|+.+++|.+.+.+..++....+ +..++..++|++.-|+ +..|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 34455678888999999999999999999999999999998866654 6678888999998887 344555544444433
Q ss_pred HHH
Q 023063 101 IGM 103 (288)
Q Consensus 101 i~~ 103 (288)
+..
T Consensus 473 l~l 475 (735)
T KOG3626|consen 473 LSL 475 (735)
T ss_pred HHH
Confidence 333
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.08 E-value=0.014 Score=55.20 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=52.4
Q ss_pred HHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH-HHHHHHHHHH
Q 023063 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI-IYQIGMICLT 107 (288)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~-l~~i~~~~~~ 107 (288)
+-.+.+.++.|.. ++|+++++.+.++...-+...++.|++|.+|||+ -+||-++++.. .....++++.
T Consensus 27 ~g~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 27 FGSLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred ccccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHhee
Confidence 3345677888886 6999999999999999999999999999999999 66665555554 4444444444
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.02 E-value=0.8 Score=42.92 Aligned_cols=187 Identities=9% Similarity=-0.083 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
.+.+....++.+..-=+...-.+.|+.+.+.-+.--.+.....-.+...++.+..|...||. -|.+++..+.+.--++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34445555555555444555567788877665666666666666777778888888999998 89888777765333322
Q ss_pred HH----HHHHhhcCCCCCCCCCCcccccccccchHHHHHHHH-HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 023063 104 IC----LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (288)
Q Consensus 104 ~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (288)
.. +......+... ..++.....+++.. ++..+..=+......+.=-|+...-..+.+..+.+.-
T Consensus 83 ~~s~~~~~~l~~~~~~~-----------~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~N 151 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSS-----------SQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMN 151 (432)
T ss_pred HHHHHHHHHHHhCCccc-----------cccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHH
Confidence 22 22111011100 00011122222222 2222221111122222223333211111122456665
Q ss_pred HHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHHHH
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~i~ 222 (288)
+...=.=.+.-.++|++.|.+....+......+.++.-+++..+
T Consensus 152 A~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 152 ATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 56555566778899999998888778776666666655555543
No 260
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.70 E-value=0.0028 Score=61.01 Aligned_cols=174 Identities=12% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhc-cchhHHHHHHHHHHHH
Q 023063 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAY-AGRFWTITIASIIYQI 101 (288)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~-~Grr~~i~~~~~l~~i 101 (288)
...+.+...++.+...++.+++|-|++.+|+.++++++++.....+ +..++.+++|++..|+ ++.|+.+.+..+...+
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v 386 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIV 386 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHH
Confidence 3345567777888888999999999999999999999998877665 6678899999999987 3345555555444444
Q ss_pred HHHHHH---HH--hhcC------CC-----CCCCCCCcc----------------cccccccchHHHHHHHHHHHHHhcc
Q 023063 102 GMICLT---IS--AILP------QL-----RPPPCEGEQ----------------VCQEANKGQVAILYVSLLLAALGSG 149 (288)
Q Consensus 102 ~~~~~~---~~--~~~p------~~-----~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~g~g~g 149 (288)
+.+... +. ...| .+ ....|.... .|...-......+.+..++..+..+
T Consensus 387 ~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~ 466 (539)
T PF03137_consen 387 SVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTF 466 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHH
Confidence 433311 11 0000 00 000011011 2322201123444444444444444
Q ss_pred CcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH-HHHHHHHHHHhHhheeecc
Q 023063 150 GIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MGAAILVAVTVLVYIQDNI 203 (288)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~i~~~~~~~l~~~~ 203 (288)
..........-...+++ +|+-+.++.... .-+|..-+|++.|.+.+..
T Consensus 467 ~~~~p~~~i~LR~V~~~------~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 467 MSQVPSTLITLRCVPPE------QRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------------------------------------------
T ss_pred hcccchheeeeccCChh------hcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 44444444555677776 588888886654 5678888999999887753
No 261
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.43 E-value=0.99 Score=42.55 Aligned_cols=117 Identities=17% Similarity=0.109 Sum_probs=71.5
Q ss_pred HHhhhHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHh
Q 023063 70 TGSLTPLIGAFVADAY--AGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALG 147 (288)
Q Consensus 70 ~~~i~~~~~G~laDr~--~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 147 (288)
+..++..+.+.+++|. +||++++.++..+..++.++.-+.. |.-.+.+.-++.+-.-.. +..+..+.-++.|++
T Consensus 291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~t~~~~~~~~~--~~~~~~ii~~l~G~~ 366 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRPTDSPPLLFTP--SYYLALIIGFLLGFG 366 (461)
T ss_pred HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCCCCCCccccccccc--chhHHHHHHHHHhhH
Confidence 3344455555665443 4899999999988888877766543 322211111111111111 233334445678999
Q ss_pred ccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHh
Q 023063 148 SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (288)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 197 (288)
-+..+.....++++..|.+ |..+++++-....++..++.....
T Consensus 367 D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 367 DACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999653 777777777766666665544433
No 262
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=94.72 E-value=0.44 Score=44.61 Aligned_cols=131 Identities=11% Similarity=0.090 Sum_probs=68.1
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchh----HHHHHHHHHHHHHH---HHHHHHhhcCCCCCCCCCCcc
Q 023063 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF----WTITIASIIYQIGM---ICLTISAILPQLRPPPCEGEQ 124 (288)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr----~~i~~~~~l~~i~~---~~~~~~~~~p~~~~~~~~~~~ 124 (288)
-.|.+..+..+...+...++.++.++||.++|++ -|+ .+....-+....+. +.+-+. .|..
T Consensus 277 ~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~-~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~--~~~~--------- 344 (493)
T KOG1330|consen 277 LIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL-SRIFPNSGTLRASQLSAALGAPLSIPFLFL--FPAF--------- 344 (493)
T ss_pred HhCCccccchhhhhHHHhhchhhheehHHHHHHH-HHhcccccchhHHHHHHhhhhhHHHHHHHH--HHhh---------
Confidence 3455555666677788889999999999999994 221 12222222222211 111110 0100
Q ss_pred cccccccchHHHHHHHHHHHHHhccCc-chhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHhHhheeec
Q 023063 125 VCQEANKGQVAILYVSLLLAALGSGGI-RPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM-GAAILVAVTVLVYIQDN 202 (288)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~~~~~l~~~ 202 (288)
...+.+ +...+++.|.-.... .+....+..|..|++ +|..++++..... .+|..-+|.+.|.+.++
T Consensus 345 -----~~~s~~-~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~------~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 345 -----TSSSMI-FGLILFLVGETISWFNWATNNPIFLEVVPPS------RRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred -----hhHHHH-HHHHHHHHHHHHHhcccccccceeeEecCcc------cccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 011222 222223333322222 233445567888887 6888888876654 44555555577777665
Q ss_pred c-chh
Q 023063 203 I-GWG 206 (288)
Q Consensus 203 ~-g~~ 206 (288)
. ||+
T Consensus 413 l~g~~ 417 (493)
T KOG1330|consen 413 LRGYK 417 (493)
T ss_pred hhCCC
Confidence 3 555
No 263
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.29 E-value=0.64 Score=41.70 Aligned_cols=148 Identities=11% Similarity=0.097 Sum_probs=79.1
Q ss_pred cCCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHH
Q 023063 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (288)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~ 97 (288)
+...|.++.+-...++...+|-+ .-++-.....++|. ... .........++++.+.+..++ |-|+++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~g-l~nlq~~vn~~lg~--~sl----~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLG-LQNLQTSVNYDLGT--VSL----GALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhcCccc--chh----hhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 34556676655444444444333 34444443332222 111 122233344555555666665 99999998776
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh--------
Q 023063 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-------- 169 (288)
Q Consensus 98 l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-------- 169 (288)
.+..... .+..| .+.-++.+-+..|+|.+..+..-.+|++++-......
T Consensus 97 ~Y~lyiA----~Nl~p-------------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~ 153 (390)
T KOG3097|consen 97 PYALYIA----ANLEP-------------------RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDG 153 (390)
T ss_pred HHHHHHH----hhcch-------------------hHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCc
Confidence 5544322 22112 3344556667788899988888777776655433211
Q ss_pred -hhhhhhhHHHHHHHHHHHHHHHHHHhH
Q 023063 170 -QATKTWKYFNWYYFVMGAAILVAVTVL 196 (288)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~g~~i~~~~~ 196 (288)
..+.-+-.+-+++.+...|..++..+.
T Consensus 154 ~~~~ffg~Ffii~~~~qv~gn~issli~ 181 (390)
T KOG3097|consen 154 MKVRFFGEFFIIFQCAQVWGNLISSLIM 181 (390)
T ss_pred eeeeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 011234555566666667766665553
No 264
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.15 E-value=1.2 Score=41.23 Aligned_cols=127 Identities=17% Similarity=0.166 Sum_probs=72.3
Q ss_pred HHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHh
Q 023063 68 GGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALG 147 (288)
Q Consensus 68 ~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 147 (288)
.+-..+.-++.-+..+|+ .-+.-+.++.++..+|.++.+++. +.++-.++.++.+++
T Consensus 69 i~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~----------------------~v~~~l~Gv~las~s 125 (402)
T PF02487_consen 69 ILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSP----------------------SVWVRLLGVVLASLS 125 (402)
T ss_pred HHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeecc----------------------chhHHHHHHHHHhhh
Confidence 334444455566677776 433334444556666766666544 566677888888988
Q ss_pred ccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee-ccchhhhhhHhHHHHHHHHHHHHHh
Q 023063 148 SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFAMFLSIIAFLIG 226 (288)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~i~~~~~ 226 (288)
.|......-++.+ .+++. ..+.+..+...++.+|+..-..+.. ..+-+..+.+..++.++-++.+++.
T Consensus 126 sg~GE~tfL~lt~-~y~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 126 SGLGEVTFLSLTH-FYGKS----------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred hhhhHHHHHHHHH-hcCcc----------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887776666543 45543 1344455555566666544333333 2233556666666555555555544
Q ss_pred cc
Q 023063 227 YP 228 (288)
Q Consensus 227 ~~ 228 (288)
.+
T Consensus 195 L~ 196 (402)
T PF02487_consen 195 LP 196 (402)
T ss_pred hc
Confidence 43
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.02 E-value=5.7 Score=37.69 Aligned_cols=169 Identities=9% Similarity=-0.031 Sum_probs=94.7
Q ss_pred CcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCC---HHHHHHHHHHHHH-HHhhhHHHHHHHHHhccchhHHHHHH
Q 023063 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMP---LTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTITIA 95 (288)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~---~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~~i~~~ 95 (288)
.++.+.-+.+..+|..+.++.. --+++.+.++ +.....+-+.... ++.+..++-+++.+++ .|.++..+-
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~l-----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLL-----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 3456665666655555544322 2234444433 4444555555555 6677888899999998 999998888
Q ss_pred HHHHHHHHHHHHHHhhcCCC--CCCCCC--Ccccccccccc-------hHHHHHHHHHHHH-HhccCcchhhhhhhhccc
Q 023063 96 SIIYQIGMICLTISAILPQL--RPPPCE--GEQVCQEANKG-------QVAILYVSLLLAA-LGSGGIRPCVVAFGADQF 163 (288)
Q Consensus 96 ~~l~~i~~~~~~~~~~~p~~--~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~l~g-~g~g~~~~~~~~~~~~~~ 163 (288)
+..+....+++++.. +|.- .++... ++..-..|.+- +.|...+..+..- -|.-...-.-+.+..|++
T Consensus 99 ~~~F~~fF~LFa~Vi-~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 99 LGFFLGFFALFAFVI-YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHH-hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 877777777777655 4331 111100 00000011000 0011111111111 111111123456778887
Q ss_pred CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee
Q 023063 164 DETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 201 (288)
..+ +-.|++..++.+.|++..++..+..++..
T Consensus 178 t~~------eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 178 TIE------EAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hHH------HhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 776 68999999999999999999988887755
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.63 E-value=6 Score=36.66 Aligned_cols=127 Identities=9% Similarity=0.086 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 023063 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (288)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~ 102 (288)
..+..++..+..-..+..+.+..+.|-.+..+.++ +......+.....+..++.-.+=-+. .-|....++..+..+.
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~-~~~~~~~~~~~l~~~~ 95 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFL-NTRLRTRVGYLLSLIA 95 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 34444445555555555665555544443334444 55556666666666666665554443 3333222222222222
Q ss_pred HHHH---HHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 023063 103 MICL---TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (288)
Q Consensus 103 ~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (288)
.+.. .++.. .. +...........+..++.+.+.|...+......++ +|.+
T Consensus 96 il~i~~l~~~~v--~~-----------~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 96 ILFIVTLDLALV--KT-----------DTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred HHHHHHHHHHhh--cc-----------CCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 2221 11110 00 11123345555666677788888888777777666 5554
No 267
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.25 E-value=3.6 Score=39.29 Aligned_cols=168 Identities=7% Similarity=-0.058 Sum_probs=89.8
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHhc---CCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhccchhHHHHH
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTITI 94 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Grr~~i~~ 94 (288)
..++.++.+.+..|+..+.|.... -+++.+ ..++.....+-....+ +..+...+-.+++|++ +|.+...+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~ 94 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYI 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHH
Confidence 345666666666665555433221 122222 1233344444443333 4455567789999998 99998887
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccc-----ccccch-------HHHHHHHHHHHH-HhccCcchhhhhhhhc
Q 023063 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQ-----EANKGQ-------VAILYVSLLLAA-LGSGGIRPCVVAFGAD 161 (288)
Q Consensus 95 ~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~~l~g-~g~g~~~~~~~~~~~~ 161 (288)
....+.....++++.. +|.-..... +..+. .+.+-. -|...+..+..- .|.-...-.-+++..|
T Consensus 95 ~~~~F~~fF~~f~~vl-yP~~~~lhp--~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~ 171 (491)
T PF03219_consen 95 IIIPFLGFFALFAFVL-YPNRDILHP--DAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANE 171 (491)
T ss_pred HHHHHHHHHHHHHHHH-hhchhhcCC--CHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7766666666666543 443211000 00110 000000 011111111111 1111111234778889
Q ss_pred ccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee
Q 023063 162 QFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 201 (288)
.++.+ +-.+.++.+..+.|+|..++..+..++.+
T Consensus 172 itt~~------eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 172 ITTVE------EAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred cCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877 68899999999999999999888777665
No 268
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.85 E-value=8.9 Score=36.44 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=55.6
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHH
Q 023063 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (288)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~ 218 (288)
.++.++.........-..+.+.+|+.. +|+..++-++...++...+...+.+.+.+..||...-.+..++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~-----~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPN-----EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344566667777777888899998664 7899999998888888877777778889999998766655554444
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.18 E-value=3 Score=38.70 Aligned_cols=61 Identities=11% Similarity=0.005 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
+.+..++..+..|+..|+.+.+....+.|..+++ +|...++...++-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~------~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE------DREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4566666677789999999999999898887765 688888888888888888877765543
No 270
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.89 E-value=3.3 Score=36.48 Aligned_cols=139 Identities=10% Similarity=0.066 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhccchh--HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHH
Q 023063 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRF--WTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (288)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr--~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (288)
|.+...++....+++-+...+..|- ..| ..+.+..++..+...+..+.. ..+|+..++..-.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~---------------~vsP~kes~~~s~ 348 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTS---------------SVSPSKESPSESL 348 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHh---------------ccCCCcCCchHHH
Confidence 5566666666666655555554443 211 345554444444333333322 1122334555567
Q ss_pred HHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHH
Q 023063 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (288)
Q Consensus 139 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~ 218 (288)
++..++-.+.|..+|.+.-+=++..|++ .|++.++++-.-.++-..++-...-.-....+-+..|.++.+...+
T Consensus 349 i~F~~~E~cvGlfwPSimkmRsqyIPEe------arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~ 422 (454)
T KOG4332|consen 349 IGFCLFEACVGLFWPSIMKMRSQYIPEE------ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFV 422 (454)
T ss_pred HHHHHHHHHHhhcchHHHHHHHhhCCHH------HHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHH
Confidence 7888888899999999988888888877 6888888877665544433221100001123445677777666555
Q ss_pred HHH
Q 023063 219 SII 221 (288)
Q Consensus 219 ~~i 221 (288)
+.+
T Consensus 423 a~i 425 (454)
T KOG4332|consen 423 ASI 425 (454)
T ss_pred HHH
Confidence 543
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=91.43 E-value=0.51 Score=44.25 Aligned_cols=130 Identities=5% Similarity=-0.106 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchH
Q 023063 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (288)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (288)
+++...+.+..+..++..++..+....--++ .-|+++....++..+..+.-.+.. .......+.+ + .
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~~~l~~~~lv--~~~n~~~Gi~-------d--~- 318 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVLASLFDLLLV--TRWNLDLGIP-------D--Q- 318 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHhcccEEEE--EEEeeeeCcC-------C--e-
Confidence 7887777777666666666666654443343 556666555544443333211110 0000000000 0 0
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeecc
Q 023063 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (288)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 203 (288)
+.....-++..+..+........+.+|..|+. .-|..++......|+|..++..++..+.+..
T Consensus 319 ~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G------~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~ 381 (433)
T PF03092_consen 319 WFALGDTILEEVIGMIAFMPSLVLAARLCPKG------SEGTVYALLASFSNLGSSVSSTLGAFLMELF 381 (433)
T ss_pred EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111122333333444445567789999987 4677777777777777777777766655443
No 272
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=91.38 E-value=5.6 Score=39.45 Aligned_cols=184 Identities=11% Similarity=-0.069 Sum_probs=112.7
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchH
Q 023063 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (288)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 134 (288)
...........++.....+..+.....+|-.-|+-.........++++.+...+.. ++. .+.....
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a-------------~~~~~~~ 82 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGA-------------IPSSGHP 82 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hcc-------------Ccccccc
Confidence 33345566777778888888888888898885555566666666666666665544 211 0111113
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccc-hhh------
Q 023063 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG-WGW------ 207 (288)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g-~~~------ 207 (288)
....+..+.+.++.++..++-+.+.+++....+ .+++.+..+++++....+.+ |.+++..+..... +..
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~~ 158 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQD 158 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccCc
Confidence 334456667788888888888888888887653 33355788899998887774 4555555544332 221
Q ss_pred hhh-HhHHHHHHHHHHHHHhccceeecCCCCChhhHHHHHHHHHHHhCcc
Q 023063 208 GLG-IPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKRKL 256 (288)
Q Consensus 208 ~f~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (288)
.|. ..++..++.++.+..+....+.-++.+.+...+.+++...+...+.
T Consensus 159 ~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~ 208 (654)
T TIGR00926 159 CYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRK 208 (654)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHH
Confidence 132 3334444445555566556666666665555567777666666543
No 273
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=87.85 E-value=11 Score=35.90 Aligned_cols=97 Identities=16% Similarity=0.114 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHH
Q 023063 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (288)
Q Consensus 60 ~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (288)
.|..-.+..+.+.+..+..|++-.++ .+.--+.++.....-+.+++. +. ...++|+.++
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~gll~~-m~-------------------~t~~Iw~~Y~ 358 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAGLVFW-MS-------------------QSHDIWVLYV 358 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHHhhh-hh-------------------cccchHHHHH
Confidence 34455666777888888999987665 544344444332223322222 22 2338899999
Q ss_pred HHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 140 SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 140 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
+.++....+....++...-++.....+ ..+-.||+-.+
T Consensus 359 ~yvlf~~~y~flitia~~~iA~~L~~~------~~aLvFGiNtf 396 (511)
T TIGR00806 359 TYVLFRGIYQFLVPIATFQIASSLSKE------LCALVFGINTF 396 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc------ceEEEEecHHH
Confidence 999999888888888888888887776 46777776443
No 274
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=87.49 E-value=1.2 Score=41.68 Aligned_cols=88 Identities=7% Similarity=-0.102 Sum_probs=53.5
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhhhhHHHHhHHh-cC-----CC-----------HHHHHHHHHHHHHHHhhhHHHHHHH
Q 023063 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ-LH-----MP-----------LTKAANTLTNFGGTGSLTPLIGAFV 81 (288)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~-----~~-----------~~~~~~~~~~~~~~~~i~~~~~G~l 81 (288)
..+|.++.+.+...+.-++++.+.-+...++-++ ++ -+ ...-.+-+.++.+...+.+....++
T Consensus 276 ~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l 355 (498)
T KOG0637|consen 276 VMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKL 355 (498)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3557888888888888777776665555555321 11 11 1112334556777788888999999
Q ss_pred HHhccchhHHHHHHHHHHHHHHHHHH
Q 023063 82 ADAYAGRFWTITIASIIYQIGMICLT 107 (288)
Q Consensus 82 aDr~~Grr~~i~~~~~l~~i~~~~~~ 107 (288)
.||+ |-|+.+..+...+.+++.+..
T Consensus 356 ~~~~-g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 356 SRKF-GTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred HHhc-CcceEEeehhHHHHHHHHHHh
Confidence 9998 855555444443444444444
No 275
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=87.16 E-value=29 Score=33.24 Aligned_cols=73 Identities=7% Similarity=0.133 Sum_probs=52.5
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHH
Q 023063 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (288)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~ 218 (288)
.+..++.........-..+.+.+|+.. .+...+|-++...++-..+-..+++.+.++.||..+-.+.-++.++
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 344566666777777788888888764 6888888777777777776667778888999998766654444433
No 276
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=82.71 E-value=17 Score=26.72 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 59 KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
..+.......++..++..+.|++.|.. |.+....+...+..++.
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHH
Confidence 344555666778888888999999987 87776666554444443
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.50 E-value=9.3 Score=35.92 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 023063 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (288)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 195 (288)
+.+..++..++.|+..|-..+....+..+..+++ +|..+-.+...+..+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~------e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPH------EREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556677888888888777777777776654 45555555555556666555543
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=77.49 E-value=49 Score=30.87 Aligned_cols=96 Identities=10% Similarity=0.073 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHH
Q 023063 59 KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (288)
Q Consensus 59 ~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (288)
-.|.+-.+..+.+.++.+..|++..++ .+..-+.++..-...+.+++.... ..+.++.+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~--------------------t~~Iwv~Y 344 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSF--------------------TGNIWVCY 344 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHH--------------------hhHHHHHH
Confidence 346667777888888899999996666 776555544433333333322222 22788888
Q ss_pred HHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 023063 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (288)
Q Consensus 139 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
++.++.........+....-++.....+ +.+-.||+-
T Consensus 345 ~~yIif~~~y~fliTiA~~qIA~~l~~e------~yaLVFGiN 381 (412)
T PF01770_consen 345 AGYIIFRSLYMFLITIASFQIAKNLSEE------RYALVFGIN 381 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc------ceeeeeeeH
Confidence 8888887777776666666666666655 466666653
No 279
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=77.29 E-value=3.6 Score=36.00 Aligned_cols=62 Identities=13% Similarity=0.145 Sum_probs=47.6
Q ss_pred HHHHHHHHhHHhhhhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHH---------HHhccchhHHH
Q 023063 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFV---------ADAYAGRFWTI 92 (288)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l---------aDr~~Grr~~i 92 (288)
...+..........+++..|+++ .|.++.+.+++..+..+.-.+..++.|.. -||+ |||+..
T Consensus 24 vGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 45566666666677889999975 58888888888888888888998888744 5787 998643
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=75.43 E-value=73 Score=29.96 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 023063 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (288)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (288)
..+..++..++.|++.+...+...++.+ .+|++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 4555566667788888888888877766 46654
No 281
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.36 E-value=16 Score=27.14 Aligned_cols=30 Identities=20% Similarity=-0.086 Sum_probs=20.3
Q ss_pred HHHHHhhhHHHHHHHHHhccchhHHHHHHH
Q 023063 67 FGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (288)
Q Consensus 67 ~~~~~~i~~~~~G~laDr~~Grr~~i~~~~ 96 (288)
=.+.+.+-....||+-|+++|-++.-++..
T Consensus 51 efIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 51 EFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 344555555678899999999876544433
No 282
>PRK10263 DNA translocase FtsK; Provisional
Probab=72.78 E-value=16 Score=38.87 Aligned_cols=34 Identities=6% Similarity=-0.108 Sum_probs=17.1
Q ss_pred HHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 187 ~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
.||++|..+...+...+|.....++..++.++++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGL 175 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGL 175 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3666666665555555555444444444333333
No 283
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=72.25 E-value=30 Score=27.48 Aligned_cols=31 Identities=10% Similarity=0.145 Sum_probs=21.4
Q ss_pred hhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 023063 156 VAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (288)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 192 (288)
+.+++...+++ +-|+..||-.+-.|++-+..
T Consensus 116 YGilSaSWD~~------r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 116 YGILSASWDPE------REGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hhhcccccCCC------CCCCcccHHHHHHhHHHHHH
Confidence 44445556665 58999999888888876543
No 284
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=71.56 E-value=27 Score=32.45 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=57.9
Q ss_pred hHHhhhhhHHHHhHHhcCCCH---HHHHHHHHH-HHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 023063 37 AVVGFNTNMISYLTTQLHMPL---TKAANTLTN-FGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (288)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~~~---~~~~~~~~~-~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~ 112 (288)
.|....+..|.++.+..+-.. --.-.+... +++.-.+|.+...++-+. +||+...... +-.+. +.+....+.
T Consensus 258 vy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~-lR~lf-iPlF~~cn~ 333 (406)
T KOG1479|consen 258 VYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVL-LRLLF-IPLFLLCNY 333 (406)
T ss_pred eeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHH-HHHHH-HHHHHHhcc
Confidence 344444567877776543221 122233334 666777776666666554 3444333322 22222 222222212
Q ss_pred CCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 023063 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (288)
Q Consensus 113 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (288)
|.+-. --.+.+++.+...++|+..|=..+....+..+..+++
T Consensus 334 ~~~~v------------~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~ 375 (406)
T KOG1479|consen 334 PPLPV------------VFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPS 375 (406)
T ss_pred CCCCc------------eecCchHHHHHHHHHHhccchHhhheehhcCCCCChH
Confidence 11100 0113455666667888888877777777777776665
No 285
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=64.23 E-value=66 Score=32.33 Aligned_cols=52 Identities=17% Similarity=0.220 Sum_probs=32.2
Q ss_pred HHHHHH---hccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccC
Q 023063 78 GAFVAD---AYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGG 150 (288)
Q Consensus 78 ~G~laD---r~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 150 (288)
.+-++| ++-||.+-+++..+++.++++...+... .++++..++.+.+++.++
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~---------------------~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG---------------------KPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------CcHHHHHHHHHHHHHHHH
Confidence 344655 4446778888888777777776665441 455666666666555443
No 286
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=62.64 E-value=1.3e+02 Score=30.29 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=23.2
Q ss_pred HHHHHHH---hccchhHHHHHHHHHHHHHHHHHHHHh
Q 023063 77 IGAFVAD---AYAGRFWTITIASIIYQIGMICLTISA 110 (288)
Q Consensus 77 ~~G~laD---r~~Grr~~i~~~~~l~~i~~~~~~~~~ 110 (288)
+.+-++| ++-||.+-++++.+++.++++...+..
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~ 78 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF 78 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444655 444677888888888888887776654
No 287
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=61.59 E-value=78 Score=30.49 Aligned_cols=27 Identities=11% Similarity=-0.025 Sum_probs=21.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHhhe
Q 023063 173 KTWKYFNWYYFVMGAAILVAVTVLVYI 199 (288)
Q Consensus 173 ~~~~~~~~~~~~~~~g~~i~~~~~~~l 199 (288)
.++-+......+.++|.+++..+.-.+
T Consensus 151 n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 151 NVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 577777788889999999988775544
No 288
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=58.87 E-value=44 Score=21.20 Aligned_cols=28 Identities=14% Similarity=0.030 Sum_probs=18.3
Q ss_pred HHHHHhhhHHHHHHHHHhccchhHHHHH
Q 023063 67 FGGTGSLTPLIGAFVADAYAGRFWTITI 94 (288)
Q Consensus 67 ~~~~~~i~~~~~G~laDr~~Grr~~i~~ 94 (288)
......+.....|+..|+++|.++..++
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~ 36 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTL 36 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 3344555667788888998888554433
No 289
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=56.36 E-value=1.7e+02 Score=27.09 Aligned_cols=96 Identities=9% Similarity=0.011 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHH
Q 023063 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVS 140 (288)
Q Consensus 61 ~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (288)
|..-.+....+.++.++.|.+--.+ .|..-++++..-...+.+++..+. ..++|+.+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~--------------------t~~Iw~~Ya~ 332 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ--------------------TQHIWVCYAG 332 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc--------------------ccceehhhhh
Confidence 3344566677788888889887666 565444444332222222222221 2267888899
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 023063 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (288)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (288)
.++.........++...-+++....+ ..|-.||+-.+
T Consensus 333 yvlfr~~y~l~itiA~~~iA~nL~~e------~~gLvFGiNTF 369 (433)
T KOG3810|consen 333 YVLFRVIYQLTITIATFQIARNLSSE------LFGLVFGINTF 369 (433)
T ss_pred HHHHHhhHhhhhhHHHHHHHHhhhhh------hheeeeehHHH
Confidence 88888888887777777777777776 56777776433
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=54.31 E-value=32 Score=33.60 Aligned_cols=65 Identities=11% Similarity=0.011 Sum_probs=53.8
Q ss_pred ccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhhee
Q 023063 130 NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (288)
Q Consensus 130 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 200 (288)
.+-+..+++--.+++|++.........-+.-+++|++ -|+.+.+.+.....+|..++..+.....
T Consensus 454 ~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~s------MkS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 454 NPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPES------MKSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777778889999999988888888888999988 5888889999999999999988875443
No 291
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=50.16 E-value=1.5e+02 Score=24.53 Aligned_cols=16 Identities=6% Similarity=-0.114 Sum_probs=9.1
Q ss_pred HHHHHHhhhHHHHHHH
Q 023063 66 NFGGTGSLTPLIGAFV 81 (288)
Q Consensus 66 ~~~~~~~i~~~~~G~l 81 (288)
...+...++..+++.+
T Consensus 54 ~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 54 LAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344555566666666
No 292
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=44.53 E-value=2e+02 Score=24.47 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=42.1
Q ss_pred HhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 023063 48 YLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (288)
Q Consensus 48 yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~ 116 (288)
.+.+..+++..+.+........... .....+.+|. +.+....+|.....+|...+..+..+|++.
T Consensus 121 l~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~-~~~~p~~LG~~Mi~~GlyfLl~aliiPn~~ 185 (224)
T PF09930_consen 121 LLAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRL-KKPYPIILGNFMIFLGLYFLLSALIIPNYI 185 (224)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 4456778898888877655444333 6667777887 755556667777777765554444466653
No 293
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=42.62 E-value=1e+02 Score=22.61 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHhccchhHHHH
Q 023063 72 SLTPLIGAFVADAYAGRFWTIT 93 (288)
Q Consensus 72 ~i~~~~~G~laDr~~Grr~~i~ 93 (288)
.+.+.+.|.-.|+.+|-.+...
T Consensus 56 il~G~~lG~WLD~~~~t~~~~t 77 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWT 77 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHH
Confidence 3444555666677767655333
No 294
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=39.18 E-value=1.6e+02 Score=23.20 Aligned_cols=39 Identities=13% Similarity=-0.122 Sum_probs=22.3
Q ss_pred cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHH
Q 023063 53 LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTI 92 (288)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i 92 (288)
.|.++...-....+.++.-.++.+++.+++|+. ++-..+
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L-~~~e~~ 105 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQYL-FFSELI 105 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHH
Confidence 355444443344445555566667778888887 554433
No 295
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=39.05 E-value=11 Score=33.42 Aligned_cols=55 Identities=9% Similarity=0.132 Sum_probs=3.4
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 023063 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVT 194 (288)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 194 (288)
.+..++..++.|+..|-..+....+..+..+++ +|..+-........+|-.+|..
T Consensus 248 d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~------e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 248 DAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPE------ERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp -------------------HHHH--------------------------------------
T ss_pred hHHHHHHHHHHHHccchhhhceeeeCCCcCCHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 355556677889999988888888888887755 3444444444444455544443
No 296
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=36.74 E-value=77 Score=26.22 Aligned_cols=32 Identities=9% Similarity=0.013 Sum_probs=18.2
Q ss_pred hhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHH
Q 023063 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIG 78 (288)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 78 (288)
.+.|.+.+ .+..+...+..++.+...+-+.++
T Consensus 115 IYiP~Fa~----~s~~~l~v~l~vF~ilv~v~c~la 146 (191)
T PF03596_consen 115 IYIPLFAS----LSLAELIVILIVFLILVGVWCFLA 146 (191)
T ss_pred Eeehhhhc----CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45565543 455666666666666655555554
No 297
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=35.01 E-value=2.9e+02 Score=24.88 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=51.2
Q ss_pred HHHHhHHhhhhhHHHHhHHhcCCC-HHHHH----HHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 023063 33 CEKLAVVGFNTNMISYLTTQLHMP-LTKAA----NTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (288)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~~-~~~~~----~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~ 107 (288)
+...+.-++-+++..+..+++.-+ +.+.. +.....+++..++..+.+++.|++ |-.....++.+.+.++.+.+.
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHH
Confidence 345566677889999998887755 33333 334444556666666778999998 888888888777777766555
Q ss_pred H
Q 023063 108 I 108 (288)
Q Consensus 108 ~ 108 (288)
.
T Consensus 121 ~ 121 (372)
T PF00854_consen 121 S 121 (372)
T ss_dssp C
T ss_pred h
Confidence 4
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=34.49 E-value=3.2e+02 Score=25.71 Aligned_cols=55 Identities=15% Similarity=0.032 Sum_probs=40.2
Q ss_pred HHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccch
Q 023063 145 ALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGW 205 (288)
Q Consensus 145 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 205 (288)
+...-.++....++.++..+++ .-|+.+...+...|+|+-.-..+..++.+..++
T Consensus 380 ~~~~ts~fv~~maf~aqisdp~------iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 380 QVFVTSMFVSGMAFHAQISDPA------IGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred hhHHHHHHHHHHHHHhhcCCcc------cCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 3333334455567777777776 578899999999999998888888887765544
No 299
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=34.37 E-value=35 Score=29.70 Aligned_cols=83 Identities=11% Similarity=0.186 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhHhhe-----eeccchhhhhhHhHHHHHHHHHHHHHhccceeecCCC-----CChhh
Q 023063 172 TKTWKYFNWYYFVMGAAILVAVTVLVYI-----QDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPA-----GSPFT 241 (288)
Q Consensus 172 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l-----~~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~ 241 (288)
++++.....-.++.++|+.++-+..-.. .....|+..+.+.+++..+-++++.+.-++.+..+++ .+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~ 81 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTL 81 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccc
Q ss_pred HHHHHHHHHHHhC
Q 023063 242 RLLQVCVAAFRKR 254 (288)
Q Consensus 242 ~~~~~~~~~~~~~ 254 (288)
+.-......+|++
T Consensus 82 ~~~~s~~~~LK~K 94 (267)
T PF07672_consen 82 SKKPSYKSILKEK 94 (267)
T ss_pred cccchHHHHHccc
No 300
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=33.27 E-value=60 Score=24.07 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 023063 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (288)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~ 107 (288)
...+-+...+.....+.+++.+|..|+. -.-+-=.+|..++.+|.....
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheE
Confidence 5667778889899999999999999998 666666667777777765543
No 301
>PRK02237 hypothetical protein; Provisional
Probab=33.01 E-value=94 Score=23.11 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Q 023063 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (288)
Q Consensus 58 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~~ 107 (288)
++.+-+...+.....+.+++.+|..|+. -.-+-=.+|..++.+|.....
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhe
Confidence 4577788889999999999999999998 555555667777777765543
No 302
>COG4827 Predicted transporter [General function prediction only]
Probab=31.72 E-value=3.1e+02 Score=23.04 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=46.7
Q ss_pred hHHhcCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHhc----cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 023063 49 LTTQLHMPLTKAANTLTNFGGTGS-LTPLIGAFVADAY----AGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (288)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~G~laDr~----~Grr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~ 123 (288)
+.+..++|..+.+....+...... +.. ..+|++ -|+.+..+ +.....+|...+.-+...|.|..+--...
T Consensus 128 ~s~i~~ls~vk~gl~~gi~f~a~v~~~~----~fa~~~~~v~k~p~pv~L-g~~mll~Glyfllaailipay~~~k~m~~ 202 (239)
T COG4827 128 LSQILSLSGVKIGLLVGIAFFAAVYVAS----SFAFRFGKVRKGPTPVTL-GSAMLLLGLYFLLAAILIPAYMKSKQMNM 202 (239)
T ss_pred HHHhcchhhhhHHHHHHHHHHHHHHHHH----HHHHHHHHHhcCCChhhH-hhHHHHHHHHHHHHHHHHhhhHhhhhccC
Confidence 346778888888887665544332 222 334443 14444444 44444444444433444566543322233
Q ss_pred ccccccccchHHHHHHHH-HHHHHh
Q 023063 124 QVCQEANKGQVAILYVSL-LLAALG 147 (288)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~-~l~g~g 147 (288)
.+.+.|+.+....+..+. .+.|+|
T Consensus 203 ~pL~~p~~~~i~~~~l~~laLmgfg 227 (239)
T COG4827 203 APLQTPESGLIPLLALGILALMGFG 227 (239)
T ss_pred CCccCCCCCchHHHHHHHHHHHHHH
Confidence 455566665555444443 444554
No 303
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=31.62 E-value=1.5e+02 Score=19.23 Aligned_cols=41 Identities=5% Similarity=-0.065 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 180 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
...|+.-+|..++.+.+......+.+.....+..++.++..
T Consensus 6 t~fWs~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~ 46 (57)
T PF11151_consen 6 TFFWSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVA 46 (57)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHH
Confidence 34567777887877776665555665555444444444433
No 304
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.60 E-value=2.2e+02 Score=20.88 Aligned_cols=26 Identities=12% Similarity=0.225 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHhHhheeeccc
Q 023063 179 NWYYFVMGAAILVAVTVLVYIQDNIG 204 (288)
Q Consensus 179 ~~~~~~~~~g~~i~~~~~~~l~~~~g 204 (288)
+...+...+..+++..++-|+-..++
T Consensus 46 g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 33444444555555555556666555
No 305
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=30.26 E-value=1.7e+02 Score=20.74 Aligned_cols=58 Identities=14% Similarity=-0.001 Sum_probs=30.0
Q ss_pred HHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheeeccchhhhhhH
Q 023063 145 ALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGI 211 (288)
Q Consensus 145 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~ 211 (288)
|+|--...|..|.++.|.--+.+ ..++...+..+|..+|......+.++...+..+..
T Consensus 5 GigRFayTplLP~M~~~~~ls~~---------~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~ 62 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLS---------QAGWLASANYLGYLVGALLASRLPRHSRPRRLLRA 62 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 33333445666666666443321 13445555666777777666666554333333333
No 306
>PRK11469 hypothetical protein; Provisional
Probab=29.57 E-value=3.2e+02 Score=22.42 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHHHHHH-HhhhHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 023063 54 HMPLTKAANTLTNFGGT-GSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (288)
Q Consensus 54 ~~~~~~~~~~~~~~~~~-~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~~~~ 106 (288)
|.+.........+.... ...+..++..+.+++ |||.-++-|.++..+|.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444433 334444555566665 88888888888888876544
No 307
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=28.05 E-value=5.5e+02 Score=24.74 Aligned_cols=81 Identities=12% Similarity=0.182 Sum_probs=55.1
Q ss_pred HHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH-HHHHHHhHhheeeccchhhhhhHhHHHHH
Q 023063 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA-ILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (288)
Q Consensus 139 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~i~~~~~~~l~~~~g~~~~f~~~~~~~~ 217 (288)
...+..+++.....+..-+-+.+.+|... .++.+++-++.-.++- ..+.-..++-+.+..||-..-.++-++.+
T Consensus 289 l~vl~Y~v~inLvE~~wKs~ik~~~~~~~-----~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~l 363 (509)
T COG3202 289 LLVLAYGVSINLVEGVWKSGIKELYPTTN-----EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVML 363 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcCChh-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHH
Confidence 33445577777777888888888888875 5777777666655555 44455566778888899877766666666
Q ss_pred HHHHHHH
Q 023063 218 LSIIAFL 224 (288)
Q Consensus 218 ~~~i~~~ 224 (288)
+..++++
T Consensus 364 itg~lFF 370 (509)
T COG3202 364 ITGVLFF 370 (509)
T ss_pred HHHHHHH
Confidence 6554443
No 308
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=25.22 E-value=6.4e+02 Score=24.51 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=40.4
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee
Q 023063 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (288)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 201 (288)
-++..+....++..+.++-+...++. .=|+.+...+...|+|+-....+.-++.+
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~------IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPA------IGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcc------cchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 34455666666777788888887776 57888999999999999776666555544
No 309
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=24.34 E-value=1.4e+02 Score=27.12 Aligned_cols=178 Identities=13% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhHHhhhhhHHHHhHHhcC-----------------CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccc
Q 023063 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLH-----------------MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG 87 (288)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~-----------------~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G 87 (288)
..-.+...|.|++|..+.+-.-.-+.++.+ .+...+-+.-....+..=+..|++- ||+ -
T Consensus 15 ~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~---~rf-p 90 (409)
T KOG3880|consen 15 VAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFI---HRF-P 90 (409)
T ss_pred hHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhh---hhc-c
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCC
Q 023063 88 RFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD 167 (288)
Q Consensus 88 rr~~i~~~~~l~~i~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 167 (288)
-..-+.+...+-+.+..+.+++. +.++-..+..+..++.|.-...--++-+..-+..
T Consensus 91 f~~Ri~~~v~~sa~s~~lVafs~----------------------s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~- 147 (409)
T KOG3880|consen 91 FGFRIALVVLLSALSFFLVAFSN----------------------SVPMSLLGVVFASISSGLGEITFLALSSRYPSIV- 147 (409)
T ss_pred cchHHHHHHHHHhcceEEEEecc----------------------chhHHHhhhhhhhhcCCcceeehhhhhccCCCce-
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhHhheee--ccchhhhhhHhHHHHHHHHHHHHHhccceeecC-CCCCh
Q 023063 168 PKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD--NIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLD-PAGSP 239 (288)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~--~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~ 239 (288)
.+++..+....+.+|..--..+.+ +..-+....+...+.++-+..+++..+.-+... |..++
T Consensus 148 ----------i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~ 212 (409)
T KOG3880|consen 148 ----------IAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQP 212 (409)
T ss_pred ----------eccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCc
No 310
>COG2119 Predicted membrane protein [Function unknown]
Probab=24.12 E-value=4.1e+02 Score=21.90 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=26.5
Q ss_pred HHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023063 65 TNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (288)
Q Consensus 65 ~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~~ 103 (288)
....++..+.-..|.++++|+ --|+.-.++.+++.+-.
T Consensus 141 lg~~l~s~laVl~G~~ia~ki-~~r~l~~~aallFl~fa 178 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKL-PERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHH
Confidence 344556667778889999998 88887777665544433
No 311
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=23.71 E-value=1.5e+02 Score=27.24 Aligned_cols=14 Identities=0% Similarity=-0.111 Sum_probs=7.6
Q ss_pred cchhhhhhhhcccC
Q 023063 151 IRPCVVAFGADQFD 164 (288)
Q Consensus 151 ~~~~~~~~~~~~~~ 164 (288)
.-++++-++.|.+-
T Consensus 251 vl~ii~~i~~E~~L 264 (374)
T PF01528_consen 251 VLSIIYLIVIEVVL 264 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 34455556666554
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=22.65 E-value=6.3e+02 Score=23.53 Aligned_cols=98 Identities=12% Similarity=0.136 Sum_probs=52.4
Q ss_pred hhhHHHHhHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHHHHH----HHHH-HHHhhcCCCC
Q 023063 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG----MICL-TISAILPQLR 116 (288)
Q Consensus 42 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~i~----~~~~-~~~~~~p~~~ 116 (288)
...+..|+. |-+..|.+.++..+...+.+++.+.-++.|.- -.-+.+..=..+-.++ .++. .++. .
T Consensus 30 l~tLatyLl---G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~-~---- 100 (508)
T COG4262 30 LGTLATYLL---GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFAL-E---- 100 (508)
T ss_pred HHHHHHHhc---CCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHh-c----
Confidence 344666764 55666777788888777777777666665543 2211111111111111 1111 1111 0
Q ss_pred CCCCCCcccccccccchHHHHHHHHHHHHHhccCcchhhhhhhhc
Q 023063 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (288)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 161 (288)
.-..-+++++.-.++|.-.|+-.|....+.-.
T Consensus 101 -------------~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 101 -------------SAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred -------------cchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 01144667777778888888887777666544
No 313
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=22.56 E-value=3.4e+02 Score=22.25 Aligned_cols=21 Identities=5% Similarity=-0.002 Sum_probs=16.8
Q ss_pred HHHHHHHhhhHHHHHHHHHhc
Q 023063 65 TNFGGTGSLTPLIGAFVADAY 85 (288)
Q Consensus 65 ~~~~~~~~i~~~~~G~laDr~ 85 (288)
.-+.++..+...+.|+++||.
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~ 109 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKI 109 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 445667778888899999998
No 314
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=21.85 E-value=4.5e+02 Score=22.63 Aligned_cols=38 Identities=13% Similarity=-0.058 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhHhheeeccchhhhhhHhHHHHHHHH
Q 023063 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (288)
Q Consensus 182 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (288)
..+.++|..+| +..|.+.+++|-+....+.++...++-
T Consensus 43 ~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 43 STAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred HHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33445555443 344555555554444444444444333
No 315
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=21.84 E-value=2.4e+02 Score=18.42 Aligned_cols=30 Identities=17% Similarity=0.091 Sum_probs=15.1
Q ss_pred HHhhhHHHHHHHHHhccchhHHHHHHHHHHH
Q 023063 70 TGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (288)
Q Consensus 70 ~~~i~~~~~G~laDr~~Grr~~i~~~~~l~~ 100 (288)
...++..++.++.+++ +++--.+.+.++..
T Consensus 36 ~~~~G~~~G~~~~~~~-~~~~~~igg~iLi~ 65 (67)
T PF02659_consen 36 MPLLGLLLGRRLGRFI-GSYAEWIGGIILIF 65 (67)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3334444555555544 66655555554443
No 316
>PHA03242 envelope glycoprotein M; Provisional
Probab=21.28 E-value=3.2e+02 Score=25.66 Aligned_cols=12 Identities=0% Similarity=-0.128 Sum_probs=6.1
Q ss_pred hhhhhhhhcccC
Q 023063 153 PCVVAFGADQFD 164 (288)
Q Consensus 153 ~~~~~~~~~~~~ 164 (288)
++++-++.|.+-
T Consensus 267 ~ii~liv~E~vL 278 (428)
T PHA03242 267 VVLLLVVVEGVL 278 (428)
T ss_pred HHHHHHHHHHHH
Confidence 445555555543
Done!