Your job contains 1 sequence.
>023067
MDRYQKVEKPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKT
VAIAEIIKVCIYFNIFTLSPISSLSLSSCLLAIYNQLAICIIEQKRIPQLHQDTAISSVS
ITDTWEPIEEGLVPVEMTRHVSMISITFSTRELNKNSPGYQSPHNAEQPKLQYRYQQQQQ
QQNQPPRQGRIPYTAVNNAYNAANEESYGRGRGRGRGRGRGRGRSYARGGYGNYQEYDGY
SNWGRGGGRGRGWGYRGTGYERGRGGGGRGYARGRGRTGGRSRGGGGY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023067
(288 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077547 - symbol:AT3G07030 species:3702 "Arabi... 282 9.7e-25 1
TAIR|locus:2204400 - symbol:AT1G76010 species:3702 "Arabi... 239 3.5e-20 1
TAIR|locus:2198551 - symbol:AT1G20220 species:3702 "Arabi... 234 1.2e-19 1
UNIPROTKB|E2R227 - symbol:LOC486757 "Uncharacterized prot... 112 5.7e-13 2
UNIPROTKB|E2RC74 - symbol:C11H9orf23 "Uncharacterized pro... 112 5.7e-13 2
UNIPROTKB|E1C3A2 - symbol:CZH9orf23 "Uncharacterized prot... 110 3.5e-12 2
UNIPROTKB|Q8N5L8 - symbol:RPP25L "Ribonuclease P protein ... 107 6.7e-12 2
UNIPROTKB|F1SEB9 - symbol:RPP25L "Uncharacterized protein... 107 6.7e-12 2
DICTYBASE|DDB_G0281409 - symbol:drpp25 "RNase MRP protein... 119 3.2e-11 2
RGD|1306576 - symbol:Rpp25l "ribonuclease P/MRP 25 subuni... 102 1.3e-10 2
MGI|MGI:1917211 - symbol:Rpp25l "ribonuclease P/MRP 25 su... 102 2.1e-10 2
UNIPROTKB|Q2KIR4 - symbol:RPP25L "Ribonuclease P protein ... 95 6.6e-10 2
ZFIN|ZDB-GENE-040718-275 - symbol:rpp25l "ribonuclease P/... 134 5.9e-09 1
UNIPROTKB|E1BQE8 - symbol:RPP25 "Uncharacterized protein"... 94 2.7e-08 2
UNIPROTKB|E1BK83 - symbol:RPP25 "Uncharacterized protein"... 81 5.1e-05 2
UNIPROTKB|F1SJ50 - symbol:RPP25 "Uncharacterized protein"... 81 5.1e-05 2
UNIPROTKB|Q9BUL9 - symbol:RPP25 "Ribonuclease P protein s... 80 5.4e-05 2
MGI|MGI:2143151 - symbol:Rpp25 "ribonuclease P/MRP 25 sub... 81 0.00010 2
RGD|1305290 - symbol:Rpp25 "ribonuclease P/MRP 25 subunit... 81 0.00010 2
FB|FBgn0033092 - symbol:CG9422 species:7227 "Drosophila m... 89 0.00017 2
>TAIR|locus:2077547 [details] [associations]
symbol:AT3G07030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR002775 Pfam:PF01918
GO:GO:0005829 EMBL:CP002686 GO:GO:0003676 IPI:IPI00519674
RefSeq:NP_187359.2 UniGene:At.74527 ProteinModelPortal:F4JD88
SMR:F4JD88 PRIDE:F4JD88 EnsemblPlants:AT3G07030.1 GeneID:3768790
KEGG:ath:AT3G07030 OMA:ERRNDGY Uniprot:F4JD88
Length = 405
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 55/68 (80%), Positives = 64/68 (94%)
Query: 1 MDRYQKVEKPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKT 60
MDRYQ+V KPKPESPINENEIRIT++G IRNYI+YAT+LLQEK K+IVLKAMGQAI+KT
Sbjct: 1 MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60
Query: 61 VAIAEIIK 68
VAI+EI+K
Sbjct: 61 VAISEILK 68
Score = 260 (96.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 52/79 (65%), Positives = 61/79 (77%)
Query: 92 AIYNQLAICIIEQKRIPQLHQDTAISSVSITDTWEPIEEGLVPVEMTRHVSMISITFSTR 151
AI +AI I + +IP LHQD AISS+SITD WEP EEGL PVE+TRHVSMISIT S
Sbjct: 56 AISKTVAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLS 115
Query: 152 ELNKNSPGYQSPHNAEQPK 170
ELNK+SPGYQ+P ++Q K
Sbjct: 116 ELNKDSPGYQAPAQSDQSK 134
>TAIR|locus:2204400 [details] [associations]
symbol:AT1G76010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0003676 EMBL:AF412102 EMBL:AY054208
EMBL:AF428441 EMBL:AY124847 IPI:IPI00531013 RefSeq:NP_565124.1
UniGene:At.24580 UniGene:At.67776 UniGene:At.75066 HSSP:P60849
ProteinModelPortal:Q93VA8 SMR:Q93VA8 STRING:Q93VA8 PRIDE:Q93VA8
EnsemblPlants:AT1G76010.1 GeneID:843932 KEGG:ath:AT1G76010
TAIR:At1g76010 HOGENOM:HOG000240806 InParanoid:Q93VA8 OMA:YDGPPQG
PhylomeDB:Q93VA8 ProtClustDB:CLSN2917456 Genevestigator:Q93VA8
Uniprot:Q93VA8
Length = 350
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 1 MDRYQKVEKPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKT 60
MD+YQ+V KPK ++PI+ NEIRIT+QG RNYITYA TLLQ+K + E+V KAMG+AINKT
Sbjct: 1 MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60
Query: 61 VAIAEIIK 68
V I E+IK
Sbjct: 61 VTIVELIK 68
Score = 217 (81.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 43/72 (59%), Positives = 53/72 (73%)
Query: 92 AIYNQLAICIIEQKRIPQLHQDTAISSVSITDTWEPIEEGLVPVEMTRHVSMISITFSTR 151
AI + I + ++RIP LHQ+T+I S ITDTWEP EEGL+P+E TRHVSMI+IT S
Sbjct: 56 AINKTVTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKI 115
Query: 152 ELNKNSPGYQSP 163
ELN +S GYQ P
Sbjct: 116 ELNTSSVGYQCP 127
>TAIR|locus:2198551 [details] [associations]
symbol:AT1G20220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009505 "plant-type cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0009506 GO:GO:0003676 GO:GO:0009505
UniGene:At.15439 OMA:EANEVRI EMBL:AF439833 EMBL:BT020430
IPI:IPI00519675 RefSeq:NP_564108.1 HSSP:O28323
ProteinModelPortal:Q944A2 SMR:Q944A2 STRING:Q944A2 PRIDE:Q944A2
EnsemblPlants:AT1G20220.1 GeneID:838610 KEGG:ath:AT1G20220
Genevestigator:Q944A2 Uniprot:Q944A2
Length = 315
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 1 MDRYQKVEKPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKT 60
MD+YQ+VEKPK ++PI ENEIRIT+ G RNYITYA LLQE + E++ KAMG+AINK+
Sbjct: 1 MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60
Query: 61 VAIAEIIK 68
V I E+IK
Sbjct: 61 VTIVELIK 68
Score = 205 (77.2 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 92 AIYNQLAICIIEQKRIPQLHQDTAISSVSITDTWEPIEEGLVPVEMTRHVSMISITFSTR 151
AI + I + ++RIP LHQ T+I S ITDTWEP EEGL +E TRHVSMI+IT S
Sbjct: 56 AINKSVTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKE 115
Query: 152 ELNKNSPGYQSPHNAEQPK 170
+LN +S GYQ P E K
Sbjct: 116 QLNTSSVGYQCPIPIEMVK 134
>UNIPROTKB|E2R227 [details] [associations]
symbol:LOC486757 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:VTRMAYT
EMBL:AAEX03015333 RefSeq:XP_003433592.1 ProteinModelPortal:E2R227
Ensembl:ENSCAFT00000025376 GeneID:486757 KEGG:cfa:486757
NextBio:20860484 Uniprot:E2R227
Length = 163
Score = 112 (44.5 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P LHQ T + + D+W PI + GL P+ + RHV + + S L+ N G
Sbjct: 73 IVKRRVPGLHQLTKLHFLQTEDSWVPISPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 89 (36.4 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 1 MDRYQK---VE----KPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K VE P P+ P + E+R+ IRN + A L+ A+ +V
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
Query: 54 GQAINKTVAIAEIIK 68
G+A K V+ AEI+K
Sbjct: 61 GRAAGKAVSCAEIVK 75
>UNIPROTKB|E2RC74 [details] [associations]
symbol:C11H9orf23 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:MKVKDGS
EMBL:AAEX03007945 RefSeq:XP_538708.1 ProteinModelPortal:E2RC74
Ensembl:ENSCAFT00000003037 GeneID:481586 KEGG:cfa:481586 CTD:481586
NextBio:20856348 Uniprot:E2RC74
Length = 163
Score = 112 (44.5 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P LHQ T + + D+W PI + GL P+ + RHV + + S L+ N G
Sbjct: 73 IVKRRVPGLHQLTKLRFLQTEDSWVPISPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 89 (36.4 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 1 MDRYQK---VE----KPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K VE P P+ P + E+R+ IRN + A L+ A+ +V
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
Query: 54 GQAINKTVAIAEIIK 68
G+A K V+ AEI+K
Sbjct: 61 GRAAGKAVSCAEIVK 75
>UNIPROTKB|E1C3A2 [details] [associations]
symbol:CZH9orf23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 OMA:MKVKDGS EMBL:AADN02068971
IPI:IPI00577474 Ensembl:ENSGALT00000009367 Uniprot:E1C3A2
Length = 170
Score = 110 (43.8 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 100 CI-IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKN 156
C+ I ++R+ +LHQ T + I + WEPI E GL + + R++ I + S L+
Sbjct: 70 CVEIMKRRLKELHQITKVLFKQIEEIWEPIVPEAGLDALTVKRNIPAICVLLSKDALDPQ 129
Query: 157 SPGYQSP 163
PGYQ+P
Sbjct: 130 EPGYQAP 136
Score = 89 (36.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 1 MDRYQK---VEKPKP----ESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K VEKP P + P + E+++ IRN + YA ++ ++I+
Sbjct: 1 MENYKKTKIVEKPCPLPFTDLPPDIIEMKVKDGSKIRNLMGYAIGKMELDSVRQILFTGS 60
Query: 54 GQAINKTVAIAEIIK 68
G+A++KT+ EI+K
Sbjct: 61 GKAVSKTITCVEIMK 75
>UNIPROTKB|Q8N5L8 [details] [associations]
symbol:RPP25L "Ribonuclease P protein subunit p25-like
protein" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005634 GO:GO:0003676
EMBL:CH471071 EMBL:AL160270 CTD:138716 eggNOG:NOG240130
HOGENOM:HOG000231665 HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS
OrthoDB:EOG49ZXQR EMBL:BC032136 IPI:IPI00166873 RefSeq:NP_680544.1
RefSeq:NP_680545.1 UniGene:Hs.15961 ProteinModelPortal:Q8N5L8
SMR:Q8N5L8 PhosphoSite:Q8N5L8 DMDM:74751030 PeptideAtlas:Q8N5L8
PRIDE:Q8N5L8 DNASU:138716 Ensembl:ENST00000297613
Ensembl:ENST00000378959 GeneID:138716 KEGG:hsa:138716
UCSC:uc003zuu.3 GeneCards:GC09M034610 H-InvDB:HIX0007998
HGNC:HGNC:19909 HPA:HPA052187 neXtProt:NX_Q8N5L8
PharmGKB:PA134989644 InParanoid:Q8N5L8 PhylomeDB:Q8N5L8
GenomeRNAi:138716 NextBio:83819 Bgee:Q8N5L8 CleanEx:HS_C9orf23
Genevestigator:Q8N5L8 Uniprot:Q8N5L8
Length = 163
Score = 107 (42.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P LHQ T + + D+W P + GL P+ + RHV + + S L+ N G
Sbjct: 73 IVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 89 (36.4 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 1 MDRYQK---VE----KPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K VE P P+ P + E+R+ IRN + A L+ A+ +V
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
Query: 54 GQAINKTVAIAEIIK 68
G+A K V+ AEI+K
Sbjct: 61 GRAAGKAVSCAEIVK 75
>UNIPROTKB|F1SEB9 [details] [associations]
symbol:RPP25L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:MKVKDGS EMBL:CU928717
RefSeq:XP_003130706.1 RefSeq:XP_003130707.1 RefSeq:XP_003130708.1
RefSeq:XP_003130709.1 UniGene:Ssc.2538 Ensembl:ENSSSCT00000012010
GeneID:100522095 KEGG:ssc:100522095 Uniprot:F1SEB9
Length = 163
Score = 107 (42.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P LHQ T + + D+W P + GL P+ + RHV + + S L+ N G
Sbjct: 73 IVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 89 (36.4 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 1 MDRYQK---VE----KPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K VE P P+ P + E+R+ IRN + A L+ A+ +V
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60
Query: 54 GQAINKTVAIAEIIK 68
G+A K V+ AEI+K
Sbjct: 61 GRAAGKAVSCAEIVK 75
>DICTYBASE|DDB_G0281409 [details] [associations]
symbol:drpp25 "RNase MRP protein subunit"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002775 Pfam:PF01918 dictyBase:DDB_G0281409
GenomeReviews:CM000152_GR GO:GO:0003676 EMBL:AAFI02000041
eggNOG:NOG240130 RefSeq:XP_640657.1 ProteinModelPortal:Q54U04
EnsemblProtists:DDB0237623 GeneID:8623041 KEGG:ddi:DDB_G0281409
OMA:EANEVRI ProtClustDB:CLSZ2846784 Uniprot:Q54U04
Length = 369
Score = 119 (46.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 106 RIPQLHQDTAISSVSITDTWEPIEEGLVPVEMTRHVSMISITFSTRELNKNSPGYQSP 163
R+P LHQ T I + I + P EEGL VE+++ + I IT S L+ +PGYQ P
Sbjct: 70 RVPGLHQITEIGTTEIVTQYMPKEEGLDKVEISKKSAFIKITLSKTPLDTTNPGYQPP 127
Score = 85 (35.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 1 MDRYQKVEKPKPESPINENEIRIT-TQGAIRNYITYATTLLQEKHAKEIVLKAMG-QAIN 58
MD+Y +V + ++ NE+RI + + I Y L + H I++KA+G + I+
Sbjct: 1 MDKYYRVPRTY-DNDTEANEVRIGGVHSQVSSSIEYGLNLFNKPH-DSIIVKAIGSKMIS 58
Query: 59 KTVAIAEIIKV 69
K + AEIIK+
Sbjct: 59 KAIFTAEIIKL 69
>RGD|1306576 [details] [associations]
symbol:Rpp25l "ribonuclease P/MRP 25 subunit-like" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 RGD:1306576
GO:GO:0003676 EMBL:CH473962 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS OrthoDB:EOG49ZXQR
EMBL:BC158601 IPI:IPI00561916 RefSeq:NP_001100118.1
UniGene:Rn.21605 Ensembl:ENSRNOT00000049032 GeneID:298002
KEGG:rno:298002 UCSC:RGD:1306576 NextBio:642945
Genevestigator:B0BMX6 Uniprot:B0BMX6
Length = 163
Score = 102 (41.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P LHQ T + + D+W P + GL P+ + RHV + + S L+ + G
Sbjct: 73 IVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 86 (35.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 10 PKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
P P+ P + E+R+ IRN + A L+ + +V G+A K V+ AEI+K
Sbjct: 17 PMPQLPPDTLEMRVRDGSKIRNLLGLALARLEGGSTRHVVFSGSGRAAGKAVSCAEIVK 75
>MGI|MGI:1917211 [details] [associations]
symbol:Rpp25l "ribonuclease P/MRP 25 subunit-like"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002775 Pfam:PF01918 MGI:MGI:1917211 GO:GO:0005634
GO:GO:0003676 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS OrthoDB:EOG49ZXQR
EMBL:AJ293897 EMBL:AK013222 EMBL:BC047068 IPI:IPI00319955
RefSeq:NP_081554.2 UniGene:Mm.425182 ProteinModelPortal:Q99JH1
PhosphoSite:Q99JH1 PaxDb:Q99JH1 PRIDE:Q99JH1
Ensembl:ENSMUST00000038434 GeneID:69961 KEGG:mmu:69961
InParanoid:Q99JH1 NextBio:330689 Bgee:Q99JH1
CleanEx:MM_2810432D09RIK Genevestigator:Q99JH1 Uniprot:Q99JH1
Length = 163
Score = 102 (41.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P LHQ T + + D+W P + GL P+ + RHV + + S L+ + G
Sbjct: 73 IVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 84 (34.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 10 PKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
P P+ P + E+R+ IRN + A L+ + +V G+A K V+ AEI+K
Sbjct: 17 PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVK 75
>UNIPROTKB|Q2KIR4 [details] [associations]
symbol:RPP25L "Ribonuclease P protein subunit p25-like
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005634 GO:GO:0003676
EMBL:BC112539 IPI:IPI00697463 RefSeq:NP_001039576.1
UniGene:Bt.20332 Ensembl:ENSBTAT00000021677 GeneID:512203
KEGG:bta:512203 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 InParanoid:Q2KIR4 KO:K14525 OMA:MKVKDGS
OrthoDB:EOG49ZXQR NextBio:20870285 Uniprot:Q2KIR4
Length = 163
Score = 95 (38.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPI--EEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
I ++R+P L+Q T + + D+W P + GL P+ + HV + + S L+ N G
Sbjct: 73 IVKRRVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYG 132
Query: 160 YQSP 163
YQ P
Sbjct: 133 YQPP 136
Score = 91 (37.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 1 MDRYQK---VE----KPKPESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K VE P P+ P + E+R+ IRN + A L+ A+ +V
Sbjct: 1 MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRAGSKIRNLLGLALERLEGGSARHVVFSGS 60
Query: 54 GQAINKTVAIAEIIK 68
G+A K V+ AEI+K
Sbjct: 61 GRAAGKAVSCAEIVK 75
>ZFIN|ZDB-GENE-040718-275 [details] [associations]
symbol:rpp25l "ribonuclease P/MRP 25 subunit-like"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002775
Pfam:PF01918 ZFIN:ZDB-GENE-040718-275 GO:GO:0003676 CTD:138716
HOVERGEN:HBG056729 KO:K14525 EMBL:BC076268 IPI:IPI00482110
RefSeq:NP_001002540.1 UniGene:Dr.83100 ProteinModelPortal:Q6DGS1
STRING:Q6DGS1 GeneID:436813 KEGG:dre:436813 InParanoid:Q6DGS1
NextBio:20831245 ArrayExpress:Q6DGS1 Uniprot:Q6DGS1
Length = 224
Score = 134 (52.2 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 1 MDRYQK---VEKPKP----ESPINENEIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ Y+K +E+P P + P + E+R+ IRN + +A + ++E+ A A
Sbjct: 1 MENYRKANTIEQPCPCPFPDLPSDTPEVRVKDGSKIRNLMRFALSRMEEETA------AS 54
Query: 54 GQAINKTVAIAEIIKVCIYFNIFTXXXXXXXXXXXXXXAIYNQLAICI-IEQKRIPQLHQ 112
V++ +C +FT AI C+ I ++RI LHQ
Sbjct: 55 ADHEGSEVSVGTGDNLCRQI-VFTGVGQSVAK------AI-----TCVEIMKRRIHGLHQ 102
Query: 113 DTAISSVSITDTWEPIEEG--LVPVEMTRHVSMISITFSTRELNKNSPGYQSP 163
T ++ ++ D WEP+E G L + ++R+V I + S L+KN PGYQ+P
Sbjct: 103 LTKLAYRTLQDVWEPLEPGAGLDSLTVSRNVPSIWVLLSRDSLDKNQPGYQAP 155
>UNIPROTKB|E1BQE8 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 OMA:AVHMRVK EMBL:AADN02051023
IPI:IPI00582710 Ensembl:ENSGALT00000040041 Uniprot:E1BQE8
Length = 164
Score = 94 (38.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 1 MDRYQKVEKPKPESPIN-EN------EIRITTQGAIRNYITYATTLLQEKHAKEIVLKAM 53
M+ ++KV + ESP+ N E+++ IRN +++A ++ K +++IV
Sbjct: 1 MENFRKVRTSEEESPLPFPNLPPGVVEMKVKEGSKIRNLMSFAMAQMELKGSRQIVFSGC 60
Query: 54 GQAINKTVAIAEIIK 68
G+A+ KT+ EI+K
Sbjct: 61 GRAVTKTITCVEIMK 75
Score = 77 (32.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 100 CI-IEQKRIPQLHQDTAISSVSITDTWE---PIEEGLVP-VEMTRHVSMISITFSTRELN 154
C+ I ++++ LHQ T + ++ + WE P+ G + + ++V I I S L+
Sbjct: 70 CVEIMKRKLGGLHQVTKVRYKTLLEVWENQDPLPGGAAQNLTVHKNVPSICILLSRDPLD 129
Query: 155 KNSPGYQSPHNAE 167
N GYQ P E
Sbjct: 130 PNQTGYQPPEPRE 142
>UNIPROTKB|E1BK83 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002775
Pfam:PF01918 GO:GO:0003676 GeneTree:ENSGT00390000002564 OMA:AVHMRVK
EMBL:DAAA02052494 IPI:IPI00695922 Ensembl:ENSBTAT00000028907
Uniprot:E1BK83
Length = 199
Score = 81 (33.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 21 IRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
+R+ IRN + +AT + + + IV G+A KTV AEI+K
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILK 85
Score = 68 (29.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWE--PIEE--GLVPVE------MTRHVSMISITFSTR 151
I ++R+ LHQ T + S+ + W+ P E G P E + ++V ++I S
Sbjct: 83 ILKRRLAGLHQVTRLRYQSVRELWQSLPPEPTPGQKPGEPAASLSVLKNVPSLAILLSKD 142
Query: 152 ELNKNSPGYQSPH 164
L+ PGYQ P+
Sbjct: 143 ALDPRQPGYQPPN 155
>UNIPROTKB|F1SJ50 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002775
Pfam:PF01918 GO:GO:0003676 GeneTree:ENSGT00390000002564 OMA:AVHMRVK
EMBL:CU407105 Ensembl:ENSSSCT00000002114 Uniprot:F1SJ50
Length = 199
Score = 81 (33.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 21 IRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
+R+ IRN + +AT + + + IV G+A KTV AEI+K
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILK 85
Score = 68 (29.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTW-----EPI-----EEGLVPVEMTRHVSMISITFSTR 151
I ++R+ LHQ T + S+ + W EP +E + + ++V ++I S
Sbjct: 83 ILKRRLVGLHQVTRLRYRSVREVWQSLPPEPTPDQKPDEPAASLTVLKNVPSLAILLSKD 142
Query: 152 ELNKNSPGYQ--SPH 164
L+ PGYQ SPH
Sbjct: 143 ALDPRQPGYQPPSPH 157
>UNIPROTKB|Q9BUL9 [details] [associations]
symbol:RPP25 "Ribonuclease P protein subunit p25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0004526
"ribonuclease P activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005739 GO:GO:0005634
GO:GO:0005813 GO:GO:0003723 EMBL:CH471136 GO:GO:0008033
GO:GO:0004526 HOGENOM:HOG000231665 HOVERGEN:HBG056729 KO:K14525
OrthoDB:EOG49ZXQR EMBL:AY034074 EMBL:AK000381 EMBL:BC002497
EMBL:BC007270 IPI:IPI00306056 RefSeq:NP_060263.2 UniGene:Hs.8562
ProteinModelPortal:Q9BUL9 IntAct:Q9BUL9 STRING:Q9BUL9
PhosphoSite:Q9BUL9 DMDM:74733233 PaxDb:Q9BUL9 PeptideAtlas:Q9BUL9
PRIDE:Q9BUL9 DNASU:54913 Ensembl:ENST00000322177
Ensembl:ENST00000499788 GeneID:54913 KEGG:hsa:54913 UCSC:uc002azj.1
CTD:54913 GeneCards:GC15M075247 HGNC:HGNC:30361 HPA:HPA046900
neXtProt:NX_Q9BUL9 PharmGKB:PA134990737 eggNOG:NOG247262
InParanoid:Q9BUL9 OMA:AVHMRVK PhylomeDB:Q9BUL9 GenomeRNAi:54913
NextBio:57966 Bgee:Q9BUL9 CleanEx:HS_RPP25 Genevestigator:Q9BUL9
GermOnline:ENSG00000178718 Uniprot:Q9BUL9
Length = 199
Score = 80 (33.2 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 21 IRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
+R+ IRN + +AT + + + IV G+A KTV AEI+K
Sbjct: 38 MRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILK 85
Score = 69 (29.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPIE----EGLVPVE------MTRHVSMISITFSTR 151
I ++R+ LHQ T + S+ + W+ + +G P E + ++V ++I S
Sbjct: 83 ILKRRLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKD 142
Query: 152 ELNKNSPGYQSPH 164
L+ PGYQ P+
Sbjct: 143 ALDPRQPGYQPPN 155
>MGI|MGI:2143151 [details] [associations]
symbol:Rpp25 "ribonuclease P/MRP 25 subunit" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 MGI:MGI:2143151 GO:GO:0005634
GO:GO:0003723 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OrthoDB:EOG49ZXQR CTD:54913
eggNOG:NOG247262 OMA:AVHMRVK EMBL:AK082822 EMBL:BC016085
EMBL:BC083064 IPI:IPI00128066 RefSeq:NP_598743.1 UniGene:Mm.274421
ProteinModelPortal:Q91WE3 STRING:Q91WE3 PhosphoSite:Q91WE3
PRIDE:Q91WE3 Ensembl:ENSMUST00000080514 GeneID:102614
KEGG:mmu:102614 UCSC:uc009puy.1 InParanoid:Q91WE3 NextBio:355562
Bgee:Q91WE3 CleanEx:MM_RPP25 Genevestigator:Q91WE3
GermOnline:ENSMUSG00000062309 Uniprot:Q91WE3
Length = 199
Score = 81 (33.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 21 IRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
+R+ IRN + +AT + + + IV G+A KTV AEI+K
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILK 85
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPIEEGLVP----------VEMTRHVSMISITFSTR 151
I ++R+ LHQ T + S+ + W+ + G P + + ++V ++I S
Sbjct: 83 ILKRRLAGLHQVTRLRYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKD 142
Query: 152 ELNKNSPGYQSPHNAEQP 169
L+ GYQ P+ + P
Sbjct: 143 ALDPRQLGYQPPNLSPGP 160
>RGD|1305290 [details] [associations]
symbol:Rpp25 "ribonuclease P/MRP 25 subunit" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004526 "ribonuclease P activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002775 Pfam:PF01918 RGD:1305290
GO:GO:0005634 GO:GO:0003723 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OrthoDB:EOG49ZXQR CTD:54913
eggNOG:NOG247262 OMA:AVHMRVK EMBL:BC087592 IPI:IPI00194381
RefSeq:NP_001012124.1 UniGene:Rn.13924 ProteinModelPortal:Q5PPN2
STRING:Q5PPN2 PhosphoSite:Q5PPN2 Ensembl:ENSRNOT00000025410
GeneID:315705 KEGG:rno:315705 UCSC:RGD:1305290 InParanoid:Q5PPN2
NextBio:669696 Genevestigator:Q5PPN2 GermOnline:ENSRNOG00000018812
Uniprot:Q5PPN2
Length = 199
Score = 81 (33.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 21 IRITTQGAIRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
+R+ IRN + +AT + + + IV G+A KTV AEI+K
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILK 85
Score = 65 (27.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 102 IEQKRIPQLHQDTAISSVSITDTWEPIEEGLVP----------VEMTRHVSMISITFSTR 151
I ++R+ LHQ T + S+ + W+ + G P + + ++V ++I S
Sbjct: 83 ILKRRLAGLHQVTRLRYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKD 142
Query: 152 ELNKNSPGYQSPHNAEQP 169
L+ GYQ P+ + P
Sbjct: 143 ALDPRQLGYQPPNLSPGP 160
>FB|FBgn0033092 [details] [associations]
symbol:CG9422 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR002775 Pfam:PF01918
EMBL:AE013599 GO:GO:0022008 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 eggNOG:NOG247262
EMBL:BT044425 RefSeq:NP_001246150.1 RefSeq:NP_610227.2
RefSeq:NP_724490.1 UniGene:Dm.4921 IntAct:Q0E9N4
EnsemblMetazoa:FBtr0086120 EnsemblMetazoa:FBtr0086121
EnsemblMetazoa:FBtr0306112 GeneID:35574 KEGG:dme:Dmel_CG9422
UCSC:CG9422-RA FlyBase:FBgn0033092 InParanoid:Q0E9N4 OMA:VTRMAYT
OrthoDB:EOG4C8693 GenomeRNAi:35574 NextBio:794101 Uniprot:Q0E9N4
Length = 206
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 100 CIIEQKRIPQLHQDTAISSVSITDTWEPIEEGLVPVEMTRHVSMISITFSTRELNKNSPG 159
C KR L+Q T ++ S+ + W+P EGL + +TR + + I S EL G
Sbjct: 77 CAEVLKRSHPLYQVTRMAYTSVEEHWKPQMEGLEEIIVTRQIPTLHILMSLDELPDTIDG 136
Query: 160 YQSPHNA 166
Q P+ +
Sbjct: 137 LQKPNTS 143
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 29 IRNYITYATTLLQEKHAKEIVLKAMGQAINKTVAIAEIIK 68
+ N I +A L + + +V G + KT++ AE++K
Sbjct: 43 VSNVIEFAQEALNKGEHRCVVWSGSGGGVVKTISCAEVLK 82
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 288 177 0.00084 109 3 11 23 0.45 32
31 0.50 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 593 (63 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.91u 0.14s 15.05t Elapsed: 00:00:01
Total cpu time: 14.91u 0.14s 15.05t Elapsed: 00:00:01
Start: Sat May 11 09:16:53 2013 End: Sat May 11 09:16:54 2013