Query 023069
Match_columns 287
No_of_seqs 209 out of 1636
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 08:13:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 4.9E-53 1.1E-57 370.3 21.0 228 45-285 3-231 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 6.3E-50 1.4E-54 362.7 24.9 223 48-281 49-274 (296)
3 PTZ00016 aquaglyceroporin; Pro 100.0 6.9E-50 1.5E-54 363.3 25.2 227 49-282 46-292 (294)
4 KOG0224 Aquaporin (major intri 100.0 1.7E-50 3.6E-55 356.9 10.6 230 49-284 28-279 (316)
5 COG0580 GlpF Glycerol uptake f 100.0 7.1E-49 1.5E-53 343.1 20.5 225 51-280 3-240 (241)
6 PF00230 MIP: Major intrinsic 100.0 1.1E-48 2.4E-53 344.9 19.8 224 46-275 1-227 (227)
7 PLN00182 putative aquaporin NI 100.0 1.7E-47 3.7E-52 344.8 25.8 217 49-280 38-254 (283)
8 PRK05420 aquaporin Z; Provisio 100.0 2.7E-47 5.8E-52 336.1 23.0 221 53-282 2-230 (231)
9 PLN00167 aquaporin TIP5; Provi 100.0 9.8E-47 2.1E-51 336.4 23.8 227 48-285 17-245 (256)
10 PLN00166 aquaporin TIP2; Provi 100.0 1.4E-46 3.1E-51 334.5 23.9 226 45-280 10-237 (250)
11 PLN00026 aquaporin NIP; Provi 100.0 2.4E-46 5.3E-51 338.6 24.3 217 49-281 67-283 (298)
12 PLN00027 aquaporin TIP; Provis 100.0 3E-46 6.5E-51 333.4 23.0 226 45-281 12-240 (252)
13 PLN00183 putative aquaporin NI 100.0 4.5E-44 9.7E-49 321.5 23.5 219 48-282 40-258 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.6E-43 5.7E-48 311.0 21.7 220 54-278 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 1.4E-41 2.9E-46 297.7 18.9 214 58-275 1-216 (216)
16 PLN00182 putative aquaporin NI 99.6 4.4E-15 9.4E-20 134.4 9.7 97 51-156 157-253 (283)
17 cd00333 MIP Major intrinsic pr 99.6 9.2E-15 2E-19 129.1 9.5 99 50-154 127-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.6 5.4E-15 1.2E-19 134.4 8.0 108 172-281 66-173 (298)
19 PLN00184 aquaporin NIP1; Provi 99.5 1.5E-14 3.3E-19 131.6 7.6 104 175-280 52-155 (296)
20 PLN00183 putative aquaporin NI 99.5 4.5E-14 9.9E-19 127.3 7.4 106 174-281 42-147 (274)
21 TIGR00861 MIP MIP family chann 99.5 9.3E-14 2E-18 121.7 8.2 96 50-151 119-215 (216)
22 PLN00166 aquaporin TIP2; Provi 99.5 1.3E-13 2.9E-18 123.0 7.7 105 175-281 16-125 (250)
23 PLN00167 aquaporin TIP5; Provi 99.4 7.2E-13 1.6E-17 118.7 8.7 103 176-280 21-128 (256)
24 PLN00027 aquaporin TIP; Provis 99.4 1.4E-12 3E-17 116.8 8.0 103 176-280 19-126 (252)
25 KOG0223 Aquaporin (major intri 99.3 4.4E-13 9.6E-18 118.1 3.7 99 51-159 130-228 (238)
26 PRK05420 aquaporin Z; Provisio 99.3 2.6E-12 5.7E-17 113.5 8.5 102 177-280 2-104 (231)
27 PTZ00016 aquaglyceroporin; Pro 99.3 2.7E-12 5.9E-17 117.2 8.3 102 177-280 50-151 (294)
28 PF00230 MIP: Major intrinsic 99.1 5.1E-10 1.1E-14 98.6 9.0 94 51-151 133-226 (227)
29 KOG0224 Aquaporin (major intri 98.9 1.7E-09 3.8E-14 96.8 6.9 97 176-274 31-128 (316)
30 COG0580 GlpF Glycerol uptake f 98.9 2.7E-09 5.9E-14 94.0 7.6 102 178-281 6-110 (241)
31 COG2116 FocA Formate/nitrite f 93.0 6.7 0.00015 35.4 17.0 186 89-286 64-264 (265)
32 PRK10805 formate transporter; 89.9 15 0.00033 33.5 17.1 101 93-197 72-182 (285)
33 PRK11562 nitrite transporter N 89.7 15 0.00033 33.2 15.0 181 92-285 61-255 (268)
34 PF01226 Form_Nir_trans: Forma 75.3 58 0.0013 29.1 11.6 107 90-198 58-172 (250)
35 PF08370 PDR_assoc: Plant PDR 71.1 8.6 0.00019 27.1 4.1 31 239-272 9-39 (65)
36 PF04632 FUSC: Fusaric acid re 59.1 2E+02 0.0044 28.9 15.1 42 117-158 372-413 (650)
37 PRK12446 undecaprenyldiphospho 39.6 9.3 0.0002 35.8 -0.1 22 106-127 6-27 (352)
38 PF03033 Glyco_transf_28: Glyc 36.8 7.6 0.00016 30.5 -1.1 21 108-128 5-25 (139)
39 TIGR00790 fnt formate/nitrite 35.4 3.1E+02 0.0068 24.1 15.1 81 116-196 68-157 (239)
40 PRK15049 L-asparagine permease 32.5 3.5E+02 0.0077 26.5 9.7 27 45-71 28-54 (499)
41 PRK09713 focB putative formate 29.0 4.5E+02 0.0097 24.0 16.6 103 93-198 71-182 (282)
42 COG0730 Predicted permeases [G 28.9 4E+02 0.0086 23.3 9.6 32 126-157 68-99 (258)
43 PF03169 OPT: OPT oligopeptide 22.4 5E+02 0.011 26.3 8.9 20 175-194 466-485 (624)
44 PF14241 DUF4341: Domain of un 22.4 71 0.0015 22.0 2.0 55 212-271 7-61 (62)
45 PRK09765 PTS system 2-O-a-mann 21.8 8.7E+02 0.019 24.8 14.8 25 257-281 600-624 (631)
46 PRK10712 PTS system fructose-s 20.3 9E+02 0.02 24.4 13.6 24 257-280 530-553 (563)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-53 Score=370.34 Aligned_cols=228 Identities=52% Similarity=0.799 Sum_probs=204.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLF 124 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~ 124 (287)
.+.++++.+|++++||++|++++|++|+++..... .....+.+.+++++|+++++.+|+++++||||+|||||++++
T Consensus 3 ~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~---~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~ 79 (238)
T KOG0223|consen 3 GELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK---YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFA 79 (238)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHH
Confidence 35577899999999999999999999998876553 123456788999999999999999999999999999999999
Q ss_pred HhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHH-hcccccc
Q 023069 125 LARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRN 203 (287)
Q Consensus 125 l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~-~~~~~~~ 203 (287)
+.|++++.+++.|+++|++|+++|+++++.+.+.+....+.+.+.+.++.+.+|+++.|++.||+|++++++ .+|+++.
T Consensus 80 ~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 80 VGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred HhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 999999999999999999999999999999998753333445566778889999999999999999999999 7787765
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccCC
Q 023069 204 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIP 283 (287)
Q Consensus 204 ~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~~ 283 (287)
.+.|+.||+++.+.+++++++||++|||||+|||+++++ .|++|||||+||++|+++++++||+++.+++
T Consensus 160 -------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~ 229 (238)
T KOG0223|consen 160 -------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAILAALIYRLVFIPDE 229 (238)
T ss_pred -------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHHHHHHHHHHhccCcc
Confidence 478999999999999999999999999999999999986 5999999999999999999999999998774
Q ss_pred CC
Q 023069 284 FK 285 (287)
Q Consensus 284 ~~ 285 (287)
.+
T Consensus 230 ~~ 231 (238)
T KOG0223|consen 230 SE 231 (238)
T ss_pred cc
Confidence 43
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=6.3e-50 Score=362.68 Aligned_cols=223 Identities=29% Similarity=0.430 Sum_probs=186.1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhc
Q 023069 48 SSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR 127 (287)
Q Consensus 48 ~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g 127 (287)
.+.+++|++++||+|||+|+|++++++...... . ...+++.+++++|+++++.+++++++||||+|||||+++++.+
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~-~--~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g 125 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQN-D--NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCG 125 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-C--CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhC
Confidence 456789999999999999999999876543221 1 1234667889999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCC---cccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccC
Q 023069 128 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG---ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA 204 (287)
Q Consensus 128 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~ 204 (287)
+++|.++++|+++|++|+++|+++++.+++......... .....+..+.+++|+.|+++|++|+++++++.++++..
T Consensus 126 ~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~ 205 (296)
T PLN00184 126 RFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205 (296)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC
Confidence 999999999999999999999999999886433211111 11122334677899999999999999999886543321
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 205 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 205 ~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
..+.|+.||+++.+++++.+++||++|||||||||+++.+ .|+++||||+||++|+++|+++|++++.+
T Consensus 206 -----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~laal~y~~l~~~ 274 (296)
T PLN00184 206 -----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAIAGAWVYNTVRYT 274 (296)
T ss_pred -----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHHHHHHHHHHHhcC
Confidence 1467999999999999999999999999999999999974 68999999999999999999999999754
No 3
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=6.9e-50 Score=363.27 Aligned_cols=227 Identities=26% Similarity=0.366 Sum_probs=188.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcC
Q 023069 49 SWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARK 128 (287)
Q Consensus 49 ~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~ 128 (287)
.++++|++++||+|||+|+|++++++....... ...+.+.+++++|+++++.+++++++||+|+|||||+++++.++
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~ 122 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK 122 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc
Confidence 367889999999999999999998766432211 12345678899999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCC-------------cccccCCCCCCCchhHHHHHHHHHHHHHH
Q 023069 129 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG-------------ANMLSKGYSKGDGLGAEIVGTFVLVYTVF 195 (287)
Q Consensus 129 ~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~E~~~T~~L~~~il 195 (287)
++|.+++.|+++|++|+++|++++|.++++.++..+.+ .....++.+..++|+.|+++|++|+++++
T Consensus 123 i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~il 202 (294)
T PTZ00016 123 FPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVIL 202 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998765433211 11223345667899999999999999999
Q ss_pred HhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhC---CCCCCC----cceehhhhHHHHH
Q 023069 196 SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYN---KDQAWD----DHWIFWAGPFIGA 268 (287)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~---~~~~~~----~~wvy~vgP~~Ga 268 (287)
+++|+++.... ...|+.||+++.+++++.++.||++|||||||||+++.. +...|+ ++||||+||++|+
T Consensus 203 a~~d~~~~~~~----~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa 278 (294)
T PTZ00016 203 AITDPNNCPAF----NYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGA 278 (294)
T ss_pred HhccCccCCCc----CcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHH
Confidence 99987664321 467999999999999999999999999999999999862 222443 6899999999999
Q ss_pred HHHHHHHHHHhccC
Q 023069 269 ALAALYHQIVIRAI 282 (287)
Q Consensus 269 i~a~~~y~~~~~~~ 282 (287)
++|+++|++++.++
T Consensus 279 ~~aally~~ll~~~ 292 (294)
T PTZ00016 279 VLGMFLYDKFIPPL 292 (294)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998664
No 4
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-50 Score=356.89 Aligned_cols=230 Identities=29% Similarity=0.412 Sum_probs=198.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcC
Q 023069 49 SWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARK 128 (287)
Q Consensus 49 ~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~ 128 (287)
...+.|++++||+||++|++++++++++...+..+ ..++..+.+++|+++++.+|+.+++||||+|||||+++++.||
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~--~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGT--GGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCC--CCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 34689999999999999999999998887776433 3345557788888889999999999999999999999999999
Q ss_pred CchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCccc--------------ccCCCCCCCchhHHHHHHHHHHHHH
Q 023069 129 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM--------------LSKGYSKGDGLGAEIVGTFVLVYTV 194 (287)
Q Consensus 129 ~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~E~~~T~~L~~~i 194 (287)
++|+|.++|+++|++||++|++.+|.+|.+.+..+.++..+ +.+..+.+++|+.|+++|.+|+.++
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l 185 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCL 185 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhhe
Confidence 99999999999999999999999999999988877654322 3345688999999999999999999
Q ss_pred HHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHh-----CCCCCC---CcceehhhhHHH
Q 023069 195 FSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIY-----NKDQAW---DDHWIFWAGPFI 266 (287)
Q Consensus 195 l~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~-----~~~~~~---~~~wvy~vgP~~ 266 (287)
++++|++|..+. .+.|+.+|+.+.++..+.+.+||..+|||||||||+++ +....+ .+.|++|++|++
T Consensus 186 ~aI~D~rN~~p~----g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~ 261 (316)
T KOG0224|consen 186 FAITDKRNPIPT----GLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLI 261 (316)
T ss_pred eEEecCCCCCCc----chhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhh
Confidence 999999885432 68999999999999999999999999999999999983 211222 467899999999
Q ss_pred HHHHHHHHHHHHhccCCC
Q 023069 267 GAALAALYHQIVIRAIPF 284 (287)
Q Consensus 267 Gai~a~~~y~~~~~~~~~ 284 (287)
|+++++++|++++..+..
T Consensus 262 Gai~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 262 GAILGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhhhhheeeeeccCC
Confidence 999999999999865443
No 5
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-49 Score=343.13 Aligned_cols=225 Identities=36% Similarity=0.523 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+..|++++||+|||+|++++++++........+....++..+++++|+.+++.+|+++++||||+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 45778899999999999999999888776554455666777999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhc------CCcccccCC-CCCCCchhHHHHHHHHHHHHHHHhcccccc
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLG------GGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRN 203 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~E~~~T~~L~~~il~~~~~~~~ 203 (287)
|++++.||++|++||++|+.+++.++++.+...+ .+..++.|+ .+..++|+.|+++|++|++++++++|+++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999988766544 122233332 456789999999999999999998874443
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHh---C---CCCCCCcceehhhhHHHHHHHHHHHHHH
Q 023069 204 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIY---N---KDQAWDDHWIFWAGPFIGAALAALYHQI 277 (287)
Q Consensus 204 ~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~---~---~~~~~~~~wvy~vgP~~Gai~a~~~y~~ 277 (287)
. ..+.|+.||+.+.+++++.++.||.++|||||||||+.. + ...++.|.|+||++|++|+++++++||.
T Consensus 163 -~----~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~ 237 (241)
T COG0580 163 -N----AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKL 237 (241)
T ss_pred -c----ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHH
Confidence 1 148899999999999999999999999999999999953 2 1112268999999999999999999998
Q ss_pred Hhc
Q 023069 278 VIR 280 (287)
Q Consensus 278 ~~~ 280 (287)
++.
T Consensus 238 ~~~ 240 (241)
T COG0580 238 LLG 240 (241)
T ss_pred Hcc
Confidence 764
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.1e-48 Score=344.85 Aligned_cols=224 Identities=41% Similarity=0.622 Sum_probs=191.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC---CCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHH
Q 023069 46 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK---CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFG 122 (287)
Q Consensus 46 ~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla 122 (287)
|.++++++|++++||+||++++|+++++.+.......+ ....+...+++++|+.+++.+++++++||||+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 46788999999999999999999999876643333211 122356778899999999999999999999999999999
Q ss_pred HHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccc
Q 023069 123 LFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKR 202 (287)
Q Consensus 123 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~ 202 (287)
.++.|+++|.+.+.|+++|++|+++|+++++.++++.........+.+.++.+..++|+.|+++|++|+++++...|+++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 99999999999999999999999999999999998753333334455667778889999999999999999999998887
Q ss_pred cCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHH
Q 023069 203 NARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 275 (287)
Q Consensus 203 ~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y 275 (287)
..+.+ .+.|+.||+++.++.+..++.||++|||||+|+|+++.+ .|+++||||++|++|+++|+++|
T Consensus 161 ~~~~~---~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLG---PLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSS---GGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccc---cccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHHHHHhhC
Confidence 65422 478999999999999999999999999999999999985 49999999999999999999988
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.7e-47 Score=344.84 Aligned_cols=217 Identities=24% Similarity=0.430 Sum_probs=183.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcC
Q 023069 49 SWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARK 128 (287)
Q Consensus 49 ~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~ 128 (287)
.++++|++++||+|||+|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||+++++.++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 467899999999999999999998766433211 12345678889999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCC
Q 023069 129 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSH 208 (287)
Q Consensus 129 ~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~ 208 (287)
++|.+++.|+++|++|+++|+++++.+++... .+.....++.+.+++++.|+++|++|+++++.+.++++..
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~---- 186 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVTP----EAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAV---- 186 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccC----
Confidence 99999999999999999999999999885321 1122233445678999999999999999999875443321
Q ss_pred CCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhc
Q 023069 209 VPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 209 ~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
+.+.++.+|+++.+..++.+++||++|||||+|||+++.+ .|+++|+||++|++|+++|+++|++++.
T Consensus 187 -~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 187 -GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred -CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 1357999999999999999999999999999999999864 6899999999999999999999999873
No 8
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=2.7e-47 Score=336.06 Aligned_cols=221 Identities=33% Similarity=0.559 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchh
Q 023069 53 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLT 132 (287)
Q Consensus 53 ~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~ 132 (287)
+|++++||+||++|+|++++++....... ..+.+.+.+++++|+++++.+++++++||+|+|||||+++++.|+++|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 68999999999999999998765422211 1123466688999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhHHHHHHhHHHHhhchhhHH--Hhc-----CCccc-ccCCCCCCCchhHHHHHHHHHHHHHHHhccccccC
Q 023069 133 RAVFYMIMQCLGAICGAAVVKGFQKSQYE--MLG-----GGANM-LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA 204 (287)
Q Consensus 133 ~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~--~~~-----~~~~~-~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~ 204 (287)
+++.|+++|++|+++|+++++.+++.... ..+ .+... ...+.+..++++.|+++|++|+++++...|+++.
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~- 158 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRAP- 158 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 99999999999999999999988754211 100 00001 1123456789999999999999999999886542
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccC
Q 023069 205 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAI 282 (287)
Q Consensus 205 ~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~ 282 (287)
....|+.||+++.++.++.+++||++|||||||||+++.+ +..|+++|+||+||++|+++++++|+++++.+
T Consensus 159 -----~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 159 -----AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred -----CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 1468999999999999999999999999999999999974 23456899999999999999999999998764
No 9
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=9.8e-47 Score=336.43 Aligned_cols=227 Identities=30% Similarity=0.462 Sum_probs=189.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHH
Q 023069 48 SSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL 125 (287)
Q Consensus 48 ~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l 125 (287)
..++++|++++||+|||+|+|+++++...... .+.+....+.+.+++++|+++++.+++++++||+|+|||||++.++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 45678999999999999999999998764321 1111122346778999999999999999999999999999999999
Q ss_pred hcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCC
Q 023069 126 ARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNAR 205 (287)
Q Consensus 126 ~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~ 205 (287)
.|+++|.+++.|+++|++|+++|+++++.++++... ......++.+..++++.|+++|++|+++++...|+++...
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~ 172 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHV----PTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLL 172 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccc----cccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 999999999999999999999999999887654211 1122223445678899999999999999999888765321
Q ss_pred CCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccCCCC
Q 023069 206 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFK 285 (287)
Q Consensus 206 ~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~~~~ 285 (287)
+...|+.||+++.++.++.+++||++|||||||||+++++ .|+++|+||+||++|+++++++|++++.+.+.+
T Consensus 173 ----~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~ 245 (256)
T PLN00167 173 ----GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDD 245 (256)
T ss_pred ----CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 2467999999999999999999999999999999999964 689999999999999999999999998765543
No 10
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.4e-46 Score=334.54 Aligned_cols=226 Identities=34% Similarity=0.571 Sum_probs=186.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CC-CCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK-SK-SKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFG 122 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla 122 (287)
+|.++++.+|++++||+|||+|+|++++++..... .+ .+....+.+.+++++|+.+++.+++++++||+|+|||||++
T Consensus 10 ~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~ 89 (250)
T PLN00166 10 GDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLG 89 (250)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHH
Confidence 34456788999999999999999999998764211 11 11112345678899999999999999999999999999999
Q ss_pred HHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccc
Q 023069 123 LFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKR 202 (287)
Q Consensus 123 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~ 202 (287)
+++.++++|.++++|+++|++|+++|+.+++.+++++. .......++.+..++++.|+++|++|+++++...++++
T Consensus 90 ~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~ 165 (250)
T PLN00166 90 LAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGES----VPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPK 165 (250)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999988875421 11122334567789999999999999999998765544
Q ss_pred cCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhc
Q 023069 203 NARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 203 ~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
+... ..+.|+.||+++.++++..+++||++|||||||||+++.+ .|+++|+||+||++|+++++++|++++.
T Consensus 166 ~~~~---~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~~aa~~y~~l~~ 237 (250)
T PLN00166 166 KGSL---GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGALAGLIYGDVFI 237 (250)
T ss_pred cccc---ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 3211 1478999999999999999999999999999999999974 6999999999999999999999988753
No 11
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=2.4e-46 Score=338.62 Aligned_cols=217 Identities=27% Similarity=0.401 Sum_probs=182.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcC
Q 023069 49 SWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARK 128 (287)
Q Consensus 49 ~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~ 128 (287)
..+++|++++||+|||+|+|+++++........ ...+.+.+++++|+++++.+++++++||||+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~---~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYD---GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 556889999999999999999987654322111 11245667899999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCC
Q 023069 129 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSH 208 (287)
Q Consensus 129 ~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~ 208 (287)
++|.++++||++|++|+++|+++++.++++.. ..+. ..++.+..++++.|+++|++|+++++.+.++++..
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~---~~g~--t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~---- 214 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHPFM---SGGV--TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAV---- 214 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cCce--eeecccHHHHHHHHHHHHHHHHHhheeeecCCCCc----
Confidence 99999999999999999999999999886532 1222 22456778999999999999999999765433321
Q ss_pred CCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 209 VPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 209 ~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
....++.||+++.+.+++.+++||++|||||||+|+++.+ .|+++|+||+||++|+++|+++|+++..+
T Consensus 215 -~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAilga~ly~~~~~~ 283 (298)
T PLN00026 215 -GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGALAGAGTYTAVKLR 283 (298)
T ss_pred -CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1357899999999999999999999999999999999863 79999999999999999999999998543
No 12
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=3e-46 Score=333.39 Aligned_cols=226 Identities=36% Similarity=0.588 Sum_probs=186.7
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFG 122 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla 122 (287)
+|...+..+|++++||+|||+|+|+++++++.... ...+....+.+.+++++|+++++.+++++++||+|+|||+|++
T Consensus 12 ~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~ 91 (252)
T PLN00027 12 GEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFG 91 (252)
T ss_pred HhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHH
Confidence 34445678999999999999999999988653211 1111112345668899999999999999999999999999999
Q ss_pred HHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhc-ccc
Q 023069 123 LFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT-DAK 201 (287)
Q Consensus 123 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~-~~~ 201 (287)
+++.|+++|.++++|+++|++|+++|+++++.+.++.. .+.....++.+..++++.|+++|++|+++++... |++
T Consensus 92 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~ 167 (252)
T PLN00027 92 AFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPK 167 (252)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999887764321 1223344566788999999999999999999874 444
Q ss_pred ccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 202 RNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 202 ~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
+. .. ..+.|+.||+.+..++++++++||++|||||||||+++.+ .|+++||||+||++|+++++++|++++.+
T Consensus 168 ~~-~~---~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 168 KG-DL---GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred cC-Cc---cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 32 11 2478999999999999999999999999999999999974 69999999999999999999999999854
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=4.5e-44 Score=321.53 Aligned_cols=219 Identities=25% Similarity=0.387 Sum_probs=183.8
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhc
Q 023069 48 SSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR 127 (287)
Q Consensus 48 ~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g 127 (287)
.+.+.+|++++||++||+++|++++++....... ...+++.+++++|+++++.+++++++||||+|||||+++++.+
T Consensus 40 ~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g 116 (274)
T PLN00183 40 MDLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFG 116 (274)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhc
Confidence 4456789999999999999999998765432211 1234566888999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCC
Q 023069 128 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDS 207 (287)
Q Consensus 128 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~ 207 (287)
+++|.++++||++|++|+++|+++++.+++... +.....+..+.+++++.|+++|++|+++++.+.++++...
T Consensus 117 ~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-----~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~-- 189 (274)
T PLN00183 117 HFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-----DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLG-- 189 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCC--
Confidence 999999999999999999999999888876421 1112223344578999999999999999998877653221
Q ss_pred CCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccC
Q 023069 208 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAI 282 (287)
Q Consensus 208 ~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~ 282 (287)
.+.++.+|+++.+.+++.+++||++|||||+|+|+++. ..|+++|+||++|++|+++++++||+++.+.
T Consensus 190 ---~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~---~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 190 ---HLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS---WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred ---CceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC---CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 35789999999999999999999999999999999986 3799999999999999999999999997553
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.6e-43 Score=310.96 Aligned_cols=220 Identities=43% Similarity=0.689 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhh
Q 023069 54 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTR 133 (287)
Q Consensus 54 r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~ 133 (287)
|++++||+|||+|+|+++++........+ ...+.+.+++++|+.+.+.+++++++||+|+|||+|++.++.++++|.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 57899999999999999998765443221 1233566789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCc--------ccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCC
Q 023069 134 AVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA--------NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNAR 205 (287)
Q Consensus 134 ~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~ 205 (287)
.++|+++|++|+++|+.+++.++++.++...... +.+.++.+..++++.|+++|++|+++++...++++...
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~ 158 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPP 158 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCC
Confidence 9999999999999999999999987665433221 12344567788999999999999999999887654311
Q ss_pred CCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHH
Q 023069 206 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 278 (287)
Q Consensus 206 ~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~ 278 (287)
. ....++.+|+++.+..+++++.||+++|||||++|+++.+....|+++|+||++|++|+++|+++||++
T Consensus 159 ~---~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 159 P---GGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred C---CCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 1 246799999999999999999999999999999999997522269999999999999999999999974
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=1.4e-41 Score=297.72 Aligned_cols=214 Identities=42% Similarity=0.727 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCC-CCC-CccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHH
Q 023069 58 AEFVATFLFLYITVLTVMGVSKSK-SKC-STVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAV 135 (287)
Q Consensus 58 ~EfigT~~lv~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~ 135 (287)
+||+||++|+|+++++........ .+. ...+...+++++|+++++.+++++++||+|+|||||++.++.++++|.+++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 599999999999999876533321 011 112456788999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchH
Q 023069 136 FYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPL 215 (287)
Q Consensus 136 ~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~ 215 (287)
.|+++|++|+++|+.+++.++++.+...........++.+..++++.|+++|++|+++++...+++++...+ ...++
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~---~~~~~ 157 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRG---GFAPL 157 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCC---ccHHH
Confidence 999999999999999999988765421111111223446778899999999999999999887764432211 36899
Q ss_pred HHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHH
Q 023069 216 PIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 275 (287)
Q Consensus 216 ~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y 275 (287)
.+|+++.+.++..+++||+++||||+|+|+++.+ ...|+++|+||++|++|+++++++|
T Consensus 158 ~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 158 AIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999863 2479999999999999999999876
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.59 E-value=4.4e-15 Score=134.42 Aligned_cols=97 Identities=23% Similarity=0.288 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+.++.+++||++|++|++++++.....+ .. .. ..++++|+++++.+++.+++||+|+|||+|+++++.++ .
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~---~~---~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~ 227 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSR---AV---GE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-R 227 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccc---cC---Cc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-c
Confidence 4678999999999999998876533211 11 11 15688899999999999999999999999999999865 5
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhc
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQ 156 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 156 (287)
|.++|+||++|++|+++|+++.+.+.
T Consensus 228 ~~~~wvY~vap~lGA~lgally~~l~ 253 (283)
T PLN00182 228 YKGIWVYIVGPFVGIIAGGFVYNLIR 253 (283)
T ss_pred ccceeHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999988775
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.57 E-value=9.2e-15 Score=129.08 Aligned_cols=99 Identities=25% Similarity=0.246 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCC
Q 023069 50 WSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKL 129 (287)
Q Consensus 50 ~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~ 129 (287)
.+.+|.++.|+++|++|+++++......+.. ......++.+|+.+...++..+++||+|+|||+|++..+.++.
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~------~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~ 200 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNGP------PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGL 200 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccccccC------CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhcc
Confidence 4578999999999999999988754321110 1112367888999999999999999999999999999999988
Q ss_pred --chhhHHHHHHHhhHHHHHHhHHHHh
Q 023069 130 --SLTRAVFYMIMQCLGAICGAAVVKG 154 (287)
Q Consensus 130 --~~~~~~~Yi~aQ~lGa~~g~~~~~~ 154 (287)
+|.+.|+||++|++|+++|+++.+.
T Consensus 201 ~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 201 ARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ccccceeehhhhHHHHHHHHHHHHHHh
Confidence 7999999999999999999987653
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.57 E-value=5.4e-15 Score=134.44 Aligned_cols=108 Identities=24% Similarity=0.320 Sum_probs=85.0
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCC
Q 023069 172 KGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKD 251 (287)
Q Consensus 172 ~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~ 251 (287)
++.+.++.++.|+++|++|++++++....++...........++.+|+++.+.+++.++.||++|||||++++.+.. .
T Consensus 66 ~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g--~ 143 (298)
T PLN00026 66 PDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALR--H 143 (298)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhC--C
Confidence 34556789999999999999998864221111110011122367999999999999999999999999999999974 3
Q ss_pred CCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 252 QAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 252 ~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
..|.+.|+||++|++|+++|+++++.++.+
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 579999999999999999999999988854
No 19
>PLN00184 aquaporin NIP1; Provisional
Probab=99.53 E-value=1.5e-14 Score=131.65 Aligned_cols=104 Identities=20% Similarity=0.207 Sum_probs=81.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCC
Q 023069 175 SKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAW 254 (287)
Q Consensus 175 ~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~ 254 (287)
+..+.++.|+++|++|+++.+..................++..|+++.+.++++++.||+++|||++|++.+.. ...|
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g--~~~~ 129 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCG--RFPL 129 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhC--CCCH
Confidence 34678999999999999998875422111111110112345559999999999999999999999999999963 3579
Q ss_pred CcceehhhhHHHHHHHHHHHHHHHhc
Q 023069 255 DDHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 255 ~~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
...|+||++|++|+++|+++++.++.
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~ 155 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFG 155 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988874
No 20
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.49 E-value=4.5e-14 Score=127.34 Aligned_cols=106 Identities=20% Similarity=0.286 Sum_probs=85.2
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCC
Q 023069 174 YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQA 253 (287)
Q Consensus 174 ~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~ 253 (287)
.+.++.++.|+++|++|+++.+...+.++....+......++.+|+++.+.+++.++.||+++||||++++.+.. ...
T Consensus 42 ~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g--~i~ 119 (274)
T PLN00183 42 LNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFG--HFP 119 (274)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhc--CCC
Confidence 345688999999999999999877654332211110112567899999999999999999999999999999984 347
Q ss_pred CCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 254 WDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 254 ~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
|...|+||++|++|+++|+++++.++..
T Consensus 120 ~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 120 WSKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999998888754
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.48 E-value=9.3e-14 Score=121.71 Aligned_cols=96 Identities=23% Similarity=0.258 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhc-C
Q 023069 50 WSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR-K 128 (287)
Q Consensus 50 ~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g-~ 128 (287)
.+.++.++.|+++|++|+++++.+... .+ +.... ...++.+|+.++..++..+++||+|+|||+|++..+.+ .
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~--~~~~~--~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~ 192 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDP--RN--RVPRG--GFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGL 192 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecC--CC--CCCCC--ccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcc
Confidence 357899999999999999988765432 11 11111 13678889999999999999999999999999999986 5
Q ss_pred CchhhHHHHHHHhhHHHHHHhHH
Q 023069 129 LSLTRAVFYMIMQCLGAICGAAV 151 (287)
Q Consensus 129 ~~~~~~~~Yi~aQ~lGa~~g~~~ 151 (287)
.+|.+.|+||++|++|+++|+.+
T Consensus 193 ~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 193 AGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ccccceeHHHHHHHHHHHHHHHh
Confidence 78999999999999999999875
No 22
>PLN00166 aquaporin TIP2; Provisional
Probab=99.46 E-value=1.3e-13 Score=123.01 Aligned_cols=105 Identities=20% Similarity=0.298 Sum_probs=83.7
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccc--ccCC---CCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhC
Q 023069 175 SKGDGLGAEIVGTFVLVYTVFSATDAK--RNAR---DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYN 249 (287)
Q Consensus 175 ~~~~~~~~E~~~T~~L~~~il~~~~~~--~~~~---~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~ 249 (287)
+..+.++.|+++|++|+++.+...... .... ........++.+|+++.+.++++++.||+++||||++++.+..
T Consensus 16 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g- 94 (250)
T PLN00166 16 ASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG- 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC-
Confidence 446789999999999999988764321 1100 0111123577899999999999999999999999999999963
Q ss_pred CCCCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 250 KDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 250 ~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
...|...|+||++|++|+++|+.+++.++..
T Consensus 95 -~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 -NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3568899999999999999999999988754
No 23
>PLN00167 aquaporin TIP5; Provisional
Probab=99.40 E-value=7.2e-13 Score=118.66 Aligned_cols=103 Identities=18% Similarity=0.338 Sum_probs=84.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccccc--C---CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCC
Q 023069 176 KGDGLGAEIVGTFVLVYTVFSATDAKRN--A---RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNK 250 (287)
Q Consensus 176 ~~~~~~~E~~~T~~L~~~il~~~~~~~~--~---~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~ 250 (287)
.++.++.|+++|++|+++.+.....++. . .........++.+|+++.+.+++.++.||+++|||+++++.+..
T Consensus 21 ~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g-- 98 (256)
T PLN00167 21 ALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGG-- 98 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhC--
Confidence 4578999999999999998876543221 1 00111245789999999999999999999999999999999973
Q ss_pred CCCCCcceehhhhHHHHHHHHHHHHHHHhc
Q 023069 251 DQAWDDHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 251 ~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
...|...|+||++|++|+++|+++++.++.
T Consensus 99 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 128 (256)
T PLN00167 99 HISVPTAMFYWISQMLASVMACLFLKVTTV 128 (256)
T ss_pred CCcHhhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 357899999999999999999998887753
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.37 E-value=1.4e-12 Score=116.78 Aligned_cols=103 Identities=21% Similarity=0.310 Sum_probs=81.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHhc--ccc--ccCCC-CCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCC
Q 023069 176 KGDGLGAEIVGTFVLVYTVFSAT--DAK--RNARD-SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNK 250 (287)
Q Consensus 176 ~~~~~~~E~~~T~~L~~~il~~~--~~~--~~~~~-~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~ 250 (287)
..+.++.|+++|++|+++.+... ..+ ..... .......++.+|+++.+.+++.++.||+++||||++++.+. +
T Consensus 19 ~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~--g 96 (252)
T PLN00027 19 ALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIG--G 96 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHh--C
Confidence 35789999999999999888652 111 11000 11112468999999999999999999999999999999985 3
Q ss_pred CCCCCcceehhhhHHHHHHHHHHHHHHHhc
Q 023069 251 DQAWDDHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 251 ~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
...|...|+||++|++|+++|+++++++..
T Consensus 97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 97 NITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356888999999999999999999987763
No 25
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.35 E-value=4.4e-13 Score=118.11 Aligned_cols=99 Identities=20% Similarity=0.237 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+.++.++.|++.||++||..++.....+.. ...++.+|+++.+.+.+.+++||+++|||+|++.++..+.
T Consensus 130 ~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~- 199 (238)
T KOG0223|consen 130 STGQGLVIEIILTFILVFTVFATATDPRRS---------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS- 199 (238)
T ss_pred CcchhHHHHHHHHHHHhheeEEEeecCCCc---------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-
Confidence 457899999999999999876533222111 2367888999999999999999999999999999999885
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhchhh
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQKSQ 159 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~ 159 (287)
|..+|+||++|++|+++++++...++.++
T Consensus 200 w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 200 WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999998887654
No 26
>PRK05420 aquaporin Z; Provisional
Probab=99.35 E-value=2.6e-12 Score=113.54 Aligned_cols=102 Identities=22% Similarity=0.163 Sum_probs=78.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhcccccc-CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCC
Q 023069 177 GDGLGAEIVGTFVLVYTVFSATDAKRN-ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWD 255 (287)
Q Consensus 177 ~~~~~~E~~~T~~L~~~il~~~~~~~~-~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~ 255 (287)
.+.++.|+++|++|+++.+......+. ...+......++.+|+++.+.+++.++.||+++|||+++++.+.. ...|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~--~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGG--RFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhC--CCCHH
Confidence 367889999999999987764211111 111100122478999999999999999999999999999999973 45799
Q ss_pred cceehhhhHHHHHHHHHHHHHHHhc
Q 023069 256 DHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 256 ~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
..|+||++|++|+++|+.+.+.++.
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~ 104 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIAS 104 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999976666653
No 27
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.34 E-value=2.7e-12 Score=117.16 Aligned_cols=102 Identities=22% Similarity=0.274 Sum_probs=80.4
Q ss_pred CCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCc
Q 023069 177 GDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDD 256 (287)
Q Consensus 177 ~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~ 256 (287)
.+.++.|+++|++|+++.++..........+......++.+|+++.+..++.++.||+++|||+++++.+.. ...|..
T Consensus 50 ~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g--~i~~~~ 127 (294)
T PTZ00016 50 VREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFG--KFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhc--cCCHHH
Confidence 468999999999999988876433221110111123567889999999999999999999999999999974 357999
Q ss_pred ceehhhhHHHHHHHHHHHHHHHhc
Q 023069 257 HWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 257 ~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
.|+||++|++|+++|+.+-+.++.
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~ 151 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYY 151 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999987666654
No 28
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.07 E-value=5.1e-10 Score=98.62 Aligned_cols=94 Identities=26% Similarity=0.309 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+.++.++.|+++|++|++.........+.. . .+. ..++.+|+.+....+..+..||+.+|||++++..+....
T Consensus 133 s~~~~~~~E~~~t~il~~~i~~~~~~~~~~--~---~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~- 205 (227)
T PF00230_consen 133 SLGQAFFSEFIGTFILVLVILAVADDKRKF--P---LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI- 205 (227)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSTTSSS--T---SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-
T ss_pred hhhhhhhhhhhhhhHHHhhhhhhccccccc--c---ccc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-
Confidence 468899999999999998876543221111 1 111 246777888888888889999999999999999998775
Q ss_pred hhhHHHHHHHhhHHHHHHhHH
Q 023069 131 LTRAVFYMIMQCLGAICGAAV 151 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~ 151 (287)
|...|+||+++++|+++|+++
T Consensus 206 ~~~~wvy~~~P~~Ga~~a~~~ 226 (227)
T PF00230_consen 206 WDYFWVYWVGPFIGAILAALL 226 (227)
T ss_dssp HTTTTHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEehHHHHHHHHHhh
Confidence 999999999999999999876
No 29
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.7e-09 Score=96.77 Aligned_cols=97 Identities=29% Similarity=0.315 Sum_probs=76.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHhccccccCCC-CCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCC
Q 023069 176 KGDGLGAEIVGTFVLVYTVFSATDAKRNARD-SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAW 254 (287)
Q Consensus 176 ~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~-~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~ 254 (287)
..+.++.||++|++|++.-+++.-...-.+. .+.-.-..+..|+++++.++.++..||+.+|||.+|+..++. .-.|
T Consensus 31 l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g--~~p~ 108 (316)
T KOG0224|consen 31 LLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILG--RLPW 108 (316)
T ss_pred HHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhc--CCCh
Confidence 3578999999999999876654322221111 111134567889999999999999999999999999999984 3689
Q ss_pred CcceehhhhHHHHHHHHHHH
Q 023069 255 DDHWIFWAGPFIGAALAALY 274 (287)
Q Consensus 255 ~~~wvy~vgP~~Gai~a~~~ 274 (287)
....+|.+++++|+++|+..
T Consensus 109 ~k~p~Y~~aQ~iGAF~gaa~ 128 (316)
T KOG0224|consen 109 KKFPVYVLAQFIGAFLGAAT 128 (316)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999864
No 30
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=98.93 E-value=2.7e-09 Score=94.04 Aligned_cols=102 Identities=22% Similarity=0.242 Sum_probs=76.8
Q ss_pred CchhHHHHHHHHHHHHHHHh---ccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCC
Q 023069 178 DGLGAEIVGTFVLVYTVFSA---TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAW 254 (287)
Q Consensus 178 ~~~~~E~~~T~~L~~~il~~---~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~ 254 (287)
+-++.|+++|++|++..... ..-+.............+..|+.|.+.+++.++.||+.+|||.+++..+.. .-.|
T Consensus 6 ~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g--~fp~ 83 (241)
T COG0580 6 KKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRG--RFPW 83 (241)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhC--CCCH
Confidence 45689999999999865432 111111111111234688999999999999999999999999999999974 3578
Q ss_pred CcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 255 DDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 255 ~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
+..-.||++|++|+++|+.+...++.+
T Consensus 84 ~~v~~YivAQ~lGA~~ga~l~~~~~~~ 110 (241)
T COG0580 84 RKVLPYIVAQVLGAFAGAALLYLLYYG 110 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999765555543
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=92.99 E-value=6.7 Score=35.41 Aligned_cols=186 Identities=15% Similarity=0.102 Sum_probs=90.6
Q ss_pred hhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhH-HHhcCCc
Q 023069 89 IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQY-EMLGGGA 167 (287)
Q Consensus 89 ~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~-~~~~~~~ 167 (287)
.+.-++++++.+...++..+..-=+ |--........++++|.+++--|+-=.+|=++|++++-.++.-.- .....+.
T Consensus 64 ~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~ 141 (265)
T COG2116 64 KLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQ 141 (265)
T ss_pred HHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccch
Confidence 3444555666555556554443111 322333345568899998888777777777777776655541100 0001111
Q ss_pred c--------cccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchh
Q 023069 168 N--------MLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 239 (287)
Q Consensus 168 ~--------~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPA 239 (287)
. .-.-+.+..+.|..=.+|.++.++.++..-.-|.. .-+-+.+-+-++ .+...++.=...|=.
T Consensus 142 ~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~-------~~K~~~m~~pv~--~Fv~~GfeH~VANm~ 212 (265)
T COG2116 142 WGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDG-------AAKIFAIILPVM--LFVASGFEHSVANMF 212 (265)
T ss_pred hHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccch-------hhHHHHHHHHHH--HHHHcCCceeeehHH
Confidence 0 00012233556666667777776666654322211 112233333333 334444444455522
Q ss_pred hhHHHHHHhCCCCCCCc-ce---eh-hhhHHH-HHHHHHHHHHHHhccCCCCC
Q 023069 240 RSLGAALIYNKDQAWDD-HW---IF-WAGPFI-GAALAALYHQIVIRAIPFKS 286 (287)
Q Consensus 240 r~lg~~i~~~~~~~~~~-~w---vy-~vgP~~-Gai~a~~~y~~~~~~~~~~~ 286 (287)
.-. ......+...|.+ .| ++ -+|-++ |+++-++.|.++++.+..++
T Consensus 213 ~i~-~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~~~ 264 (265)
T COG2116 213 MIP-WAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNRYK 264 (265)
T ss_pred HHH-HHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccccC
Confidence 211 2333323345555 22 22 246666 55667889998887655443
No 32
>PRK10805 formate transporter; Provisional
Probab=89.94 E-value=15 Score=33.53 Aligned_cols=101 Identities=9% Similarity=0.041 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhhccc-cccccchHHHHHHHHhcCCchhhHHHHH----HHhhHHHHHHhHHHHhhc-----hhhHHH
Q 023069 93 AWAFGGMIFALVYCTAGI-SGGHINPAVTFGLFLARKLSLTRAVFYM----IMQCLGAICGAAVVKGFQ-----KSQYEM 162 (287)
Q Consensus 93 ~~~~g~~v~~~i~~~~~i-SGah~NPAvTla~~l~g~~~~~~~~~Yi----~aQ~lGa~~g~~~~~~~~-----~~~~~~ 162 (287)
++.+.+.+...+..-+.. +| |-..++ ..+.+|.+|.+..-.| ++-++|+++-+.+.+..- .+.+..
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHH
Confidence 445555554555544443 34 555454 3677888998888444 455555555444443221 011100
Q ss_pred hcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHh
Q 023069 163 LGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSA 197 (287)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~ 197 (287)
.-.......-+.+.++.|+-=.+|.++.++.++..
T Consensus 148 ~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000112345667777777888877777654
No 33
>PRK11562 nitrite transporter NirC; Provisional
Probab=89.74 E-value=15 Score=33.24 Aligned_cols=181 Identities=7% Similarity=-0.007 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhh---HHHhcCCc-
Q 023069 92 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQ---YEMLGGGA- 167 (287)
Q Consensus 92 ~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~~- 167 (287)
.+..+++.+.+.++..+..- -=|=......++.|+.+|.+.+-.|.-=++|=++|++++-.+.... ........
T Consensus 61 ~g~~F~~GLilVi~~G~eLF--Tgn~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 61 MGATFGIALTLVIIAGSELF--TGHTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHHhCcccc--ccchHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 34455555544555433321 1133333345667888888887777666666666666544332110 00000000
Q ss_pred ---ccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHH
Q 023069 168 ---NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 244 (287)
Q Consensus 168 ---~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~ 244 (287)
..-.-+.+..+.|+-=.+|.++.++.++.....+. .. .. +.+-+.+++. ....+.=...|= --+..
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~~~~--~g----Ki--~~i~~pI~~F--v~~GFEH~IANm-~~~~l 207 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIRTEG--AA----KF--IAIWWCLLAF--IASGYEHSVANM-TLFAL 207 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccc--cc----hh--HHHHHHHHHH--HHcCCcchhHhH-HHHHH
Confidence 00001234556677777777777777665432211 11 12 2222222222 222333233441 12222
Q ss_pred HHHhCC--CCCCC---cceeh-hhhHHHHH-HHHHHHHHHHhccCCCC
Q 023069 245 ALIYNK--DQAWD---DHWIF-WAGPFIGA-ALAALYHQIVIRAIPFK 285 (287)
Q Consensus 245 ~i~~~~--~~~~~---~~wvy-~vgP~~Ga-i~a~~~y~~~~~~~~~~ 285 (287)
.++... ...|. +.+++ .+|-++|+ ++-++.|.+++++++..
T Consensus 208 ~~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~ 255 (268)
T PRK11562 208 SWFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRP 255 (268)
T ss_pred HHHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCc
Confidence 233211 01121 12233 36888877 56678888888766544
No 34
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=75.32 E-value=58 Score=29.07 Aligned_cols=107 Identities=12% Similarity=-0.008 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhch----hh----HH
Q 023069 90 QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQK----SQ----YE 161 (287)
Q Consensus 90 ~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~----~~----~~ 161 (287)
+..++.+++.+...+...+..- -=|-.+....++.|+.+|.+.+--|.-=.+|=++|++++-.+.. .. ..
T Consensus 58 l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~ 135 (250)
T PF01226_consen 58 LVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMG 135 (250)
T ss_dssp HHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHH
Confidence 3345556555555555444432 23555555667778899888776666555555555555433321 11 11
Q ss_pred HhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhc
Q 023069 162 MLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT 198 (287)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~ 198 (287)
..-.......-+.+.++.|+.=.++.++..+.++...
T Consensus 136 ~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~ 172 (250)
T PF01226_consen 136 EYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAF 172 (250)
T ss_dssp HHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000001123456677777788888777777654
No 35
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=71.05 E-value=8.6 Score=27.06 Aligned_cols=31 Identities=29% Similarity=0.713 Sum_probs=19.2
Q ss_pred hhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHH
Q 023069 239 ARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAA 272 (287)
Q Consensus 239 Ar~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~ 272 (287)
..++|-++....+-+.+..| ||+| +|+++|-
T Consensus 9 ~~tlG~~vL~~rG~~~~~~W-yWIg--vgaL~G~ 39 (65)
T PF08370_consen 9 NSTLGVAVLKSRGLFTESYW-YWIG--VGALLGF 39 (65)
T ss_pred CCcHHHHHHHHcCCCCCCcE-Eeeh--HHHHHHH
Confidence 46889888865443444455 7776 4566653
No 36
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=59.11 E-value=2e+02 Score=28.90 Aligned_cols=42 Identities=19% Similarity=0.122 Sum_probs=31.3
Q ss_pred hHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchh
Q 023069 117 PAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKS 158 (287)
Q Consensus 117 PAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~ 158 (287)
.+|+.+.+-...-|......++.+.++|+.+|.++.+.+.|.
T Consensus 372 ~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~ 413 (650)
T PF04632_consen 372 AAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPH 413 (650)
T ss_pred HHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 334333344455588899999999999999999998888764
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=39.63 E-value=9.3 Score=35.78 Aligned_cols=22 Identities=32% Similarity=0.549 Sum_probs=18.6
Q ss_pred hhccccccccchHHHHHHHHhc
Q 023069 106 CTAGISGGHINPAVTFGLFLAR 127 (287)
Q Consensus 106 ~~~~iSGah~NPAvTla~~l~g 127 (287)
+.+.-+|||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 4566789999999999998874
No 38
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=36.76 E-value=7.6 Score=30.46 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=17.8
Q ss_pred ccccccccchHHHHHHHHhcC
Q 023069 108 AGISGGHINPAVTFGLFLARK 128 (287)
Q Consensus 108 ~~iSGah~NPAvTla~~l~g~ 128 (287)
..-|+||+||.+.|+-.+.++
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHHHhcc
Confidence 345789999999999999865
No 39
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=35.39 E-value=3.1e+02 Score=24.14 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=42.6
Q ss_pred chHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchh---------hHHHhcCCcccccCCCCCCCchhHHHHH
Q 023069 116 NPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKS---------QYEMLGGGANMLSKGYSKGDGLGAEIVG 186 (287)
Q Consensus 116 NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 186 (287)
|-......++.|+.+|.+.+-.|.-=++|=++|+++.-.+... +....-.......-+.+..+.|+.=+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 3333334466788888888877766666666666664433211 0100000000001123456667777777
Q ss_pred HHHHHHHHHH
Q 023069 187 TFVLVYTVFS 196 (287)
Q Consensus 187 T~~L~~~il~ 196 (287)
.++..+.++.
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 40
>PRK15049 L-asparagine permease; Provisional
Probab=32.45 E-value=3.5e+02 Score=26.46 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=17.7
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITV 71 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~ 71 (287)
|+++.+...--.+.-.+||-+|+-.+.
T Consensus 28 r~L~~~~~~~i~~G~~IGsGiF~~~g~ 54 (499)
T PRK15049 28 KAMGNRQVQMIAIGGAIGTGLFLGAGA 54 (499)
T ss_pred ccCCHhHhHHHhhhccccchHHHhhHH
Confidence 345555555566778888888765553
No 41
>PRK09713 focB putative formate transporter; Provisional
Probab=28.96 E-value=4.5e+02 Score=23.97 Aligned_cols=103 Identities=8% Similarity=-0.016 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHHHH----HHHhhHHHHHHhHHHHhhch---hh--HHHh
Q 023069 93 AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFY----MIMQCLGAICGAAVVKGFQK---SQ--YEML 163 (287)
Q Consensus 93 ~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Y----i~aQ~lGa~~g~~~~~~~~~---~~--~~~~ 163 (287)
++.+.+.+.+.++..+..-=+ |=. ++.....++.+|++..-. +++-++|+++-+.+.+..-. +. ....
T Consensus 71 g~~F~vGLilIv~~g~ELfTg--N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~~ 147 (282)
T PRK09713 71 GLCFTLGFILLAVCGTSLFTS--SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVA 147 (282)
T ss_pred HHHHHHHHHHHHHhCccccHH--HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHHH
Confidence 445555555555544433212 212 222345788888888744 44555665555555432210 00 0000
Q ss_pred cCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhc
Q 023069 164 GGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT 198 (287)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~ 198 (287)
-.....-.-+.+.++.|+--.+|.++.++.++...
T Consensus 148 ~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~~ 182 (282)
T PRK09713 148 VLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMSY 182 (282)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000001134556778888888888887777543
No 42
>COG0730 Predicted permeases [General function prediction only]
Probab=28.85 E-value=4e+02 Score=23.33 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=25.9
Q ss_pred hcCCchhhHHHHHHHhhHHHHHHhHHHHhhch
Q 023069 126 ARKLSLTRAVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 126 ~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
.++..|+....+..+=++|+++|+.+...+..
T Consensus 68 ~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~~~ 99 (258)
T COG0730 68 RGNVDWKLALILLLGALIGAFLGALLALLLPA 99 (258)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 46678999999999999999999777665533
No 43
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast. OPT1 is not a member of the ABC or PTR membrane transport families [].; GO: 0055085 transmembrane transport
Probab=22.44 E-value=5e+02 Score=26.26 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=12.6
Q ss_pred CCCCchhHHHHHHHHHHHHH
Q 023069 175 SKGDGLGAEIVGTFVLVYTV 194 (287)
Q Consensus 175 ~~~~~~~~E~~~T~~L~~~i 194 (287)
+..+.|..|+++|++=.++.
T Consensus 466 ~Pr~~f~~Q~iG~~ig~~v~ 485 (624)
T PF03169_consen 466 PPRAQFYAQIIGTIIGAFVA 485 (624)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 34567778887777654443
No 44
>PF14241 DUF4341: Domain of unknown function (DUF4341)
Probab=22.36 E-value=71 Score=22.05 Aligned_cols=55 Identities=29% Similarity=0.289 Sum_probs=32.8
Q ss_pred cchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHH
Q 023069 212 LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA 271 (287)
Q Consensus 212 ~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a 271 (287)
...+.||++.....+..+...|.+=+=.+.+.+ ......+.+.+.+|=++|+.+.
T Consensus 7 ~GG~lIGla~~~ll~~~Gri~GiSGil~~~~~~-----~~~~~~W~~~fl~Gl~~g~~l~ 61 (62)
T PF14241_consen 7 IGGLLIGLAASLLLLLNGRIAGISGILSGLLSP-----NKPDRDWRLAFLAGLILGGFLA 61 (62)
T ss_pred HHHHHHHHHHHHHHHHcCcceehHHHHHHHhCC-----CCCCccHHHHHHHHHHHHHHHh
Confidence 456788888887777778887766333332222 1123334566777777766653
No 45
>PRK09765 PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional
Probab=21.84 E-value=8.7e+02 Score=24.82 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=20.3
Q ss_pred ceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 257 HWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 257 ~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
.|.|.++=++|+++.++++.++-+.
T Consensus 600 ~~~~~~~~~~g~~v~a~~~~~~k~~ 624 (631)
T PRK09765 600 AIGWFGAALVGAAISTAILLIWRRH 624 (631)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcch
Confidence 4668999999999999999766543
No 46
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=20.29 E-value=9e+02 Score=24.42 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=20.6
Q ss_pred ceehhhhHHHHHHHHHHHHHHHhc
Q 023069 257 HWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 257 ~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
.|.|+++=++|.++.++++.++-+
T Consensus 530 ~~~~iiai~ig~vvt~~~~~~~k~ 553 (563)
T PRK10712 530 VLGYLVAIIAGTLVAGLAYAFLKR 553 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 577999999999999999987755
Done!