Query 023069
Match_columns 287
No_of_seqs 209 out of 1636
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 15:50:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023069.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023069hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 3.4E-60 1.2E-64 430.6 19.4 257 30-286 38-294 (304)
2 3iyz_A Aquaporin-4; water tran 100.0 5.4E-55 1.8E-59 398.9 23.7 246 30-284 24-274 (340)
3 3gd8_A Aquaporin-4; proton exc 100.0 6E-54 2E-58 375.4 21.6 222 51-281 2-223 (223)
4 1j4n_A Aquaporin 1; membrane p 100.0 8.1E-53 2.8E-57 378.0 24.0 231 45-283 3-237 (271)
5 2zz9_A Aquaporin-4; water tran 100.0 3.5E-53 1.2E-57 383.8 21.2 230 45-283 5-234 (301)
6 2w2e_A AQY1, aquaporin, aquapo 100.0 1.5E-52 5E-57 377.2 22.1 222 49-281 41-266 (279)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.2E-52 4.1E-57 375.6 20.2 226 45-283 4-230 (266)
8 2b6o_A Aquaporin-0, lens fiber 100.0 8.5E-52 2.9E-56 369.9 24.1 226 45-283 2-227 (263)
9 3llq_A Aquaporin Z 2; aquapori 100.0 5.9E-52 2E-56 368.2 17.2 223 48-279 25-253 (256)
10 2o9g_A Aquaporin Z; integral m 100.0 1E-51 3.5E-56 363.9 18.4 222 52-282 4-233 (234)
11 1ldf_A Glycerol uptake facilit 100.0 1.2E-51 4E-56 372.6 19.0 227 51-283 6-259 (281)
12 3c02_A Aquaglyceroporin; membr 100.0 1.2E-51 4.3E-56 368.3 14.8 226 50-281 7-244 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 3.3E-50 1.1E-54 357.0 20.3 225 51-280 3-245 (246)
14 2f2b_A Aquaporin AQPM; protein 99.6 3.5E-15 1.2E-19 131.9 10.4 99 51-157 142-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.4 9.9E-13 3.4E-17 117.1 7.8 103 176-282 9-111 (263)
16 2w2e_A AQY1, aquaporin, aquapo 99.3 3.5E-12 1.2E-16 114.4 8.8 102 51-160 167-268 (279)
17 2o9g_A Aquaporin Z; integral m 99.3 6.5E-12 2.2E-16 110.0 9.5 98 51-157 133-231 (234)
18 3llq_A Aquaporin Z 2; aquapori 99.3 6E-12 2E-16 111.4 8.6 97 51-156 156-253 (256)
19 3d9s_A Aquaporin-5, AQP-5; aqu 99.3 1.2E-11 4.2E-16 110.1 10.6 99 51-157 128-227 (266)
20 2zz9_A Aquaporin-4; water tran 99.3 1.6E-11 5.5E-16 111.0 9.6 99 51-157 133-231 (301)
21 3iyz_A Aquaporin-4; water tran 99.2 1.7E-11 5.8E-16 112.0 9.4 99 51-157 172-270 (340)
22 3gd8_A Aquaporin-4; proton exc 99.2 2.2E-11 7.7E-16 105.8 9.7 98 51-156 124-221 (223)
23 3cn5_A Aquaporin; membrane pro 99.2 6E-12 2.1E-16 114.0 6.0 105 51-158 183-289 (304)
24 1ldf_A Glycerol uptake facilit 99.2 4.8E-11 1.7E-15 107.2 10.0 102 51-158 144-257 (281)
25 1j4n_A Aquaporin 1; membrane p 99.2 5.6E-11 1.9E-15 106.2 8.8 97 53-157 138-234 (271)
26 3c02_A Aquaglyceroporin; membr 99.2 1.1E-10 3.6E-15 103.7 10.4 102 53-159 135-245 (258)
27 3kcu_A Probable formate transp 93.6 2.4 8.3E-05 37.4 15.0 104 92-198 71-183 (285)
28 3kly_A Putative formate transp 83.9 17 0.00057 31.9 12.4 103 92-198 70-182 (280)
29 3tds_E Formate/nitrite transpo 76.1 37 0.0013 29.4 11.9 105 92-198 67-178 (268)
30 4fc4_A Nitrite transporter NIR 54.2 60 0.0021 28.0 8.7 103 92-197 61-171 (261)
31 3s2u_A UDP-N-acetylglucosamine 52.1 2.3 8E-05 38.3 -0.8 22 107-128 8-29 (365)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3.4e-60 Score=430.65 Aligned_cols=257 Identities=74% Similarity=1.280 Sum_probs=209.8
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhcc
Q 023069 30 VKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAG 109 (287)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~ 109 (287)
.||+++|++.+..+.+|+++++++|++++||+|||+|+|++++++++.....++....+++.+++++|+++++.+|++++
T Consensus 38 ~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~ 117 (304)
T 3cn5_A 38 GKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAG 117 (304)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeec
Confidence 48999999989889999999999999999999999999999998876544333334567888999999999999999999
Q ss_pred ccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHH
Q 023069 110 ISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFV 189 (287)
Q Consensus 110 iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~ 189 (287)
+||||+|||||+++++.|+++|.+++.|+++|++||++|+++++.++++.++..+.+.+.+.++.+..++|+.|+++|++
T Consensus 118 iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tfi 197 (304)
T 3cn5_A 118 ISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFV 197 (304)
T ss_dssp TTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887766655555556677888999999999999
Q ss_pred HHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHH
Q 023069 190 LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAA 269 (287)
Q Consensus 190 L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai 269 (287)
|+++++.++|+++...+++.+.+.|+.||++|+++.++++++||++|||||||||+++++++..|+++|+||+||++|++
T Consensus 198 Lv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~ 277 (304)
T 3cn5_A 198 LVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAA 277 (304)
T ss_dssp HHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHH
Confidence 99999998887655432222348899999999999999999999999999999999996544689999999999999999
Q ss_pred HHHHHHHHHhccCCCCC
Q 023069 270 LAALYHQIVIRAIPFKS 286 (287)
Q Consensus 270 ~a~~~y~~~~~~~~~~~ 286 (287)
+|+++|++++++.+.|.
T Consensus 278 laa~~y~~l~~~~~~~~ 294 (304)
T 3cn5_A 278 VAAAYHQYVLRAAAIKA 294 (304)
T ss_dssp HHHHHHHTTSCCCC---
T ss_pred HHHHHHHHHhCCCCCCc
Confidence 99999999998877653
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=5.4e-55 Score=398.89 Aligned_cols=246 Identities=36% Similarity=0.588 Sum_probs=205.3
Q ss_pred CCCCCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHH
Q 023069 30 VKDYTEPPPAPLFE-----PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALV 104 (287)
Q Consensus 30 ~~~~~~~~~~~~~~-----~~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i 104 (287)
++|+.+|.+.|..+ .++....++||++++||+|||+|+|++++++++... ..+....+++.+++++|+++++.+
T Consensus 24 ~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~-~~~~~~~g~l~Iala~GlaV~~~v 102 (340)
T 3iyz_A 24 RDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGG-SENPLPVDMVLISLCFGLSIATMV 102 (340)
T ss_pred CCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCcchHHHHHHHHHHHHHhe
Confidence 56666655555322 234556689999999999999999999998876522 122234567889999999999999
Q ss_pred HhhccccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHH
Q 023069 105 YCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEI 184 (287)
Q Consensus 105 ~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 184 (287)
|+++++||||+|||||+++++.|+++|.+++.||++|++||++|+++++.++++.... ..+.+.+.++.+..++|+.|+
T Consensus 103 ~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~-~lg~~~~~~~~s~~~~f~~E~ 181 (340)
T 3iyz_A 103 QCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVEL 181 (340)
T ss_pred eEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcC-ceeeccCCCccCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998765321 123344556677889999999
Q ss_pred HHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhH
Q 023069 185 VGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGP 264 (287)
Q Consensus 185 ~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP 264 (287)
++||+|+++|+++.|+++... ....|+.||+++.+..+.++++||++|||||||||+++.+ .|.++||||+||
T Consensus 182 i~Tf~Lv~~Ila~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgP 254 (340)
T 3iyz_A 182 IITFQLVFTIFASCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGP 254 (340)
T ss_pred HHHHHHHHHHHHhhcCccCCc----ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHH
Confidence 999999999999988766432 1467999999998888888899999999999999999964 799999999999
Q ss_pred HHHHHHHHHHHHHHhccCCC
Q 023069 265 FIGAALAALYHQIVIRAIPF 284 (287)
Q Consensus 265 ~~Gai~a~~~y~~~~~~~~~ 284 (287)
++|+++|+++|++++.+++.
T Consensus 255 iiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 255 IIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred HHHHHHHHHHHHHHhCCChh
Confidence 99999999999999877553
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=6e-54 Score=375.42 Aligned_cols=222 Identities=39% Similarity=0.676 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
++||++++||+|||+|+|++++++.+.. ...+....+++.+++++|+++++.+|+++++||||+|||||+++++.|+++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~-~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 80 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWG-GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTT-TTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCC
Confidence 5799999999999999999999887542 222233456788999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCCCCCCC
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVP 210 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~ 210 (287)
|.+++.|+++|++||++|+.+++.+++++... ..+.+.+.++.+..++++.|+++|++|+++++.+.|+++....
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~-~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~---- 155 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVT---- 155 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCcc----
Confidence 99999999999999999999999999875432 2234455566777899999999999999999999887764321
Q ss_pred ccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 211 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 211 ~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
...|+.||+++.+....+++.||++||||||||||++.+ +|+++||||+||++|+++|+++||++++|
T Consensus 156 ~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 156 GSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 467999999998777777789999999999999999974 79999999999999999999999998864
No 4
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=8.1e-53 Score=378.05 Aligned_cols=231 Identities=42% Similarity=0.718 Sum_probs=196.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC----CCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKS----KSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVT 120 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvT 120 (287)
+|.++++++|++++||+|||+|+|++++++.+.... ..+....+.+.+++++|+++++.+|+++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 567788899999999999999999999988764321 1112223577899999999999999999999999999999
Q ss_pred HHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccc
Q 023069 121 FGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDA 200 (287)
Q Consensus 121 la~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~ 200 (287)
+++++.|+++|.+++.|+++|++||++|+++++.++++... ...+.+...++.+..++++.|+++|++|++++++++|+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~ 161 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD-NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDR 161 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT-CCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc-cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999864321 11233445566778899999999999999999999887
Q ss_pred cccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhc
Q 023069 201 KRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 280 (287)
Q Consensus 201 ~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~ 280 (287)
++... +.+.|+.||+++.+..+.++++||++|||||||||+++.+ .|+++|+||+||++|+++|+++|++++.
T Consensus 162 ~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~~~ 234 (271)
T 1j4n_A 162 RRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFILA 234 (271)
T ss_dssp SCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred cCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 65432 2578999999999887887889999999999999999964 7999999999999999999999999987
Q ss_pred cCC
Q 023069 281 AIP 283 (287)
Q Consensus 281 ~~~ 283 (287)
+++
T Consensus 235 ~~~ 237 (271)
T 1j4n_A 235 PRS 237 (271)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=3.5e-53 Score=383.80 Aligned_cols=230 Identities=38% Similarity=0.635 Sum_probs=194.4
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLF 124 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~ 124 (287)
++..+.+++|++++||+|||+|+|++++++++.... .+....+++.+++++|+++++.+|+++++||||+|||||++++
T Consensus 5 ~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~-~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 83 (301)
T 2zz9_A 5 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 83 (301)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHH
Confidence 456678899999999999999999999887654422 2223456778999999999999999999999999999999999
Q ss_pred HhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccC
Q 023069 125 LARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA 204 (287)
Q Consensus 125 l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~ 204 (287)
+.|+++|.+++.|+++|++||++|+++++.++++.... ..+.+.+.++.+..++|+.|+++|++|+++++++.|+++..
T Consensus 84 ~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~-~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 84 CTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp HTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGG-TSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-ceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999865422 22334445567778999999999999999999998876543
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccCC
Q 023069 205 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIP 283 (287)
Q Consensus 205 ~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~~ 283 (287)
. +.+.|+.||+++.+..+.++++||++|||||||||+++.+ .|.++||||+||++|+++|+++|++++.+++
T Consensus 163 ~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 163 V----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp C----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred c----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 2 2578999999998888888899999999999999999974 7999999999999999999999999986543
No 6
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.5e-52 Score=377.17 Aligned_cols=222 Identities=33% Similarity=0.490 Sum_probs=187.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccC--CCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHH
Q 023069 49 SWSFYRAGIAEFVATFLFLYITVLTVMG--VSKS--KSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLF 124 (287)
Q Consensus 49 ~~~~~r~~~~EfigT~~lv~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~ 124 (287)
.++.+|++++||+|||+|+|++++++.. .... +.+....+++.+++++|+++++.+|+++++||||+|||||++++
T Consensus 41 ~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 41 VRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHH
Confidence 3568899999999999999999886432 2111 11222345778999999999999999999999999999999999
Q ss_pred HhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccC
Q 023069 125 LARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA 204 (287)
Q Consensus 125 l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~ 204 (287)
+.|+++|.+++.|+++|++||++|+++++.++++... ..+.+.++.+..++|+.|+++|++|+++++.+.++++..
T Consensus 121 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~----~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~ 196 (279)
T 2w2e_A 121 LARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA----FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA 196 (279)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC----CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce----eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999999999999999999876431 123344456777899999999999999999987655432
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhcc
Q 023069 205 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 281 (287)
Q Consensus 205 ~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~ 281 (287)
+.+.|+.||+++.++++++++.||++|||||||||+++.+ ..|.++||||+||++|+++|+++|++++..
T Consensus 197 -----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiGa~la~~ly~~l~~~ 266 (279)
T 2w2e_A 197 -----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266 (279)
T ss_dssp -----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 2578999999999999999999999999999999999974 345789999999999999999999998754
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=375.61 Aligned_cols=226 Identities=36% Similarity=0.591 Sum_probs=195.9
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLF 124 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~ 124 (287)
+|+++++++|++++||+|||+|+|+++++++... ....+.+.+++++|+++++.+|+++++||||+|||||++++
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~-----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~ 78 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP-----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALL 78 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHH
Confidence 3567788999999999999999999999875321 11245778999999999999999999999999999999999
Q ss_pred HhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccC
Q 023069 125 LARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA 204 (287)
Q Consensus 125 l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~ 204 (287)
+.|+++|.+++.|+++|++||++|+++++.++++.... ..+.+.+.++.+..++|+.|+++|++|++++++++|+++..
T Consensus 79 ~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~-~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 157 (266)
T 3d9s_A 79 VGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG-NLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 157 (266)
T ss_dssp HTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccC-ceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 99999999999999999999999999999999865422 22334444566778899999999999999999998866543
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCc-ceehhhhHHHHHHHHHHHHHHHhccCC
Q 023069 205 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDD-HWIFWAGPFIGAALAALYHQIVIRAIP 283 (287)
Q Consensus 205 ~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~-~wvy~vgP~~Gai~a~~~y~~~~~~~~ 283 (287)
. ..+.|+.||+++.+..+.++++||++|||||||||+++.+ .|++ +||||+||++|+++|+++|++++.+++
T Consensus 158 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 158 P----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp C----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred c----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 2 2578999999999999999999999999999999999974 7888 999999999999999999999987644
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=8.5e-52 Score=369.93 Aligned_cols=226 Identities=35% Similarity=0.569 Sum_probs=194.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHH
Q 023069 45 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLF 124 (287)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~ 124 (287)
+|.++++++|++++||+|||+|+|+++++++.. +....+++.+++++|+++++.+++++++||||+|||||++++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-----~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~ 76 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFL 76 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-----CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHH
Confidence 366778899999999999999999999887532 112345677899999999999999999999999999999999
Q ss_pred HhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccC
Q 023069 125 LARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA 204 (287)
Q Consensus 125 l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~ 204 (287)
+.|+++|.++++|+++|++||++|+.+++.+++++... ..+.+.+.++.+..++|+.|+++|++|+++++++.|+++..
T Consensus 77 ~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 155 (263)
T 2b6o_A 77 VGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNG 155 (263)
T ss_dssp HTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCS-SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCS
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccc-ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 99999999999999999999999999999999765321 12334455667778999999999999999999998866543
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccCC
Q 023069 205 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIP 283 (287)
Q Consensus 205 ~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~~ 283 (287)
. ..+.|+.||+++.++++.++++||++|||||||||+++.+ .|+++||||+||++|+++|+++|++++.+++
T Consensus 156 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 156 R----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp S----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred C----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 2 2578999999999999999999999999999999999974 8999999999999999999999999987643
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.9e-52 Score=368.20 Aligned_cols=223 Identities=33% Similarity=0.530 Sum_probs=185.1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhc
Q 023069 48 SSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR 127 (287)
Q Consensus 48 ~~~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g 127 (287)
...+++|++++||+|||+|+|++++++...... +....+++.+++++|+++++.+|+++++||||+|||||+++++.|
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~--~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g 102 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAF--PELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAG 102 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhc
Confidence 344678999999999999999999987644332 123456788999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHhhHHHHHHhHHHHhhchhh--HHHhcCCc---cc-ccCCCCCCCchhHHHHHHHHHHHHHHHhcccc
Q 023069 128 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQ--YEMLGGGA---NM-LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAK 201 (287)
Q Consensus 128 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~~~---~~-~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~ 201 (287)
+++|.+++.|+++|++||++|+++++.++++. ++..+... .. .....+..++|+.|+++|++|++++++++|++
T Consensus 103 ~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~ 182 (256)
T 3llq_A 103 RFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGR 182 (256)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999987532 11100011 11 11245667899999999999999999988865
Q ss_pred ccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHh
Q 023069 202 RNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 279 (287)
Q Consensus 202 ~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~ 279 (287)
+. +.+.|+.||+++.++.++.++.||++||||||||||++.+ +..|+++||||+||++|+++|+++|+++.
T Consensus 183 ~~------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 183 VP------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp SC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CC------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 42 1578999999999999999999999999999999999974 34577999999999999999999999884
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1e-51 Score=363.87 Aligned_cols=222 Identities=30% Similarity=0.496 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCch
Q 023069 52 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSL 131 (287)
Q Consensus 52 ~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~ 131 (287)
++|++++||+|||+|+|++++++...... +....+.+.+++++|+++++.+|+++++||||+|||||+++++.|+++|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~--~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGF--PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCC--CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCH
Confidence 58999999999999999999887543322 1223467889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhHHHHHHhHHHHhhchhh--HHHh-c----CCccc-ccCCCCCCCchhHHHHHHHHHHHHHHHhcccccc
Q 023069 132 TRAVFYMIMQCLGAICGAAVVKGFQKSQ--YEML-G----GGANM-LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRN 203 (287)
Q Consensus 132 ~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~--~~~~-~----~~~~~-~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~ 203 (287)
++++.|+++|++||++|+.+++.++++. ++.. + .+... ...+.+..++|+.|+++|++|+++++.++|+++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~ 161 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAP 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999998643 2111 0 01111 1124567789999999999999999999885432
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCCcceehhhhHHHHHHHHHHHHHHHhccC
Q 023069 204 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAI 282 (287)
Q Consensus 204 ~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~~~wvy~vgP~~Gai~a~~~y~~~~~~~ 282 (287)
+.+.|+.||+++.++++..+++||++||||||||||++++ +..|+++||||+||++|+++|+++|+++++++
T Consensus 162 ------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 162 ------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred ------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 2578999999999999999999999999999999999984 34577999999999999999999999998653
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.2e-51 Score=372.65 Aligned_cols=227 Identities=27% Similarity=0.374 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+++|++++||+|||+|+|++++++.+...++. ..+.+.+++++|+++++.+|+++++||||+|||||+++++.|+++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~---~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 82 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFD 82 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCC
Confidence 47899999999999999999988765444321 234455899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcC-----------------CcccccCCCCCCCchhHHHHHHHHHHHH
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-----------------GANMLSKGYSKGDGLGAEIVGTFVLVYT 193 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~E~~~T~~L~~~ 193 (287)
|.+++.|+++|++||++|+++++.++++.++..+. ..+.+.++.+..++|+.|+++|++|+++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~ 162 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGL 162 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876543211 1122333467788999999999999999
Q ss_pred HHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhC----CCC------CCCcceehhhh
Q 023069 194 VFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYN----KDQ------AWDDHWIFWAG 263 (287)
Q Consensus 194 il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~----~~~------~~~~~wvy~vg 263 (287)
++.++|+++.... +.+.|+.||+++.+++++.++.||++||||||||||+++. +.. +|.|+||||+|
T Consensus 163 il~~~d~~~~~~~---~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vg 239 (281)
T 1ldf_A 163 ILALTDDGNGVPR---GPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFG 239 (281)
T ss_dssp HHHHHCTTSSSCC---GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHH
T ss_pred HHHHhccCCCCcc---cchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHH
Confidence 9999887654321 2588999999999999999999999999999999999861 111 23389999999
Q ss_pred HHHHHHHHHHHHHHHhccCC
Q 023069 264 PFIGAALAALYHQIVIRAIP 283 (287)
Q Consensus 264 P~~Gai~a~~~y~~~~~~~~ 283 (287)
|++|+++|+++|+++++++.
T Consensus 240 Pi~Ga~la~~~y~~l~~~~~ 259 (281)
T 1ldf_A 240 PIVGAIVGAFAYRKLIGRHL 259 (281)
T ss_dssp HHHHHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHhCccC
Confidence 99999999999999986543
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-51 Score=368.25 Aligned_cols=226 Identities=21% Similarity=0.311 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCC
Q 023069 50 WSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKL 129 (287)
Q Consensus 50 ~~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~ 129 (287)
++++|++++||+|||+|+|++++++.+....+ ...+++.+++++|+++++.+|+++++||||+|||||+++++.|++
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 83 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKF 83 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCC
Confidence 45789999999999999999998776543221 134677899999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHhhHHHHHHhHHHHhhchhhHHHhcC----CcccccCCCCCCCchhHHHHHHHHHHHHHHHhccccccCC
Q 023069 130 SLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG----GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNAR 205 (287)
Q Consensus 130 ~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~~~~~~~~ 205 (287)
+|.+++.|+++|++||++|+++++.+++++++.... +......+++..++++.|+++|++|+++++.++|+++...
T Consensus 84 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~ 163 (258)
T 3c02_A 84 DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGK 163 (258)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCc
Confidence 999999999999999999999999999887654321 1111222334445899999999999999999988765421
Q ss_pred CCCCCccc-hHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhC---CCCCC----CcceehhhhHHHHHHHHHHHHHH
Q 023069 206 DSHVPILA-PLPIGFAVFLVHLATIPITGTGINPARSLGAALIYN---KDQAW----DDHWIFWAGPFIGAALAALYHQI 277 (287)
Q Consensus 206 ~~~~~~~~-~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~---~~~~~----~~~wvy~vgP~~Gai~a~~~y~~ 277 (287)
. +.+. |+.||+++.+++++.+++||++|||||||||+++++ ++..| .|+||||+||++|+++|+++|++
T Consensus 164 ~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~ 240 (258)
T 3c02_A 164 F---HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDK 240 (258)
T ss_dssp C---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred c---cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHH
Confidence 1 2577 999999999999999999999999999999999862 22344 67999999999999999999999
Q ss_pred Hhcc
Q 023069 278 VIRA 281 (287)
Q Consensus 278 ~~~~ 281 (287)
++.+
T Consensus 241 ~~~~ 244 (258)
T 3c02_A 241 VICP 244 (258)
T ss_dssp THHH
T ss_pred Hhcc
Confidence 9865
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=3.3e-50 Score=357.04 Aligned_cols=225 Identities=32% Similarity=0.419 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCC--------CC-----CccchhHHHHHHHHHHHHHHHhhccccccccc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVS-KSKS--------KC-----STVGIQGIAWAFGGMIFALVYCTAGISGGHIN 116 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~-~~~~--------~~-----~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~N 116 (287)
+++|++++||+|||+|+|++++++.... ..++ +. ...+++.+++++|+++++.+|+++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4689999999999999999998876543 1110 01 11234558999999999999999999999999
Q ss_pred hHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhhHHH-hcCCcccccCCCCCCCchhHHHHHHHHHHHHHH
Q 023069 117 PAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEM-LGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF 195 (287)
Q Consensus 117 PAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il 195 (287)
||||+++++.|+++|++++.|+++|++||++|+.+++.+++++... .+.+.+.+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999999874221 122233343566778999999999999999999
Q ss_pred HhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHH--Hh-CCCCCCCcceehhhhHHHHHHHHH
Q 023069 196 SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAL--IY-NKDQAWDDHWIFWAGPFIGAALAA 272 (287)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i--~~-~~~~~~~~~wvy~vgP~~Gai~a~ 272 (287)
...++++.. +.+.|+.||+++.+++++.++.||++|||||||||++ .. +++..|++.|+||++|++|+++|+
T Consensus 163 ~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa 237 (246)
T 2f2b_A 163 GIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAA 237 (246)
T ss_dssp HHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHH
T ss_pred EEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHH
Confidence 876544432 2578999999999999999999999999999999999 33 446789999999999999999999
Q ss_pred HHHHHHhc
Q 023069 273 LYHQIVIR 280 (287)
Q Consensus 273 ~~y~~~~~ 280 (287)
++|+++++
T Consensus 238 ~~y~~l~~ 245 (246)
T 2f2b_A 238 LTYQYLTS 245 (246)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999875
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.59 E-value=3.5e-15 Score=131.92 Aligned_cols=99 Identities=25% Similarity=0.326 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHH-----
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFL----- 125 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l----- 125 (287)
+.++.++.|+++||+|++.+++.....+.. . ...++.+|+.++..+++.+++||+|+|||+|+++.+
T Consensus 142 ~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~------~--~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~ 213 (246)
T 2f2b_A 142 SYWQAMLAEVVGTFLLMITIMGIAVDERAP------K--GFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIF 213 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSTTSC------T--TCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHheeeEEecCCCCC------C--ceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHc
Confidence 467899999999999999987654321111 1 125788899999999999999999999999999998
Q ss_pred hcCCchhhHHHHHHHhhHHHHHHhHHHHhhch
Q 023069 126 ARKLSLTRAVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 126 ~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
.++..|.+.|+||++|++|+++|+++.+.+.+
T Consensus 214 g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 214 AGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 34567899999999999999999998877653
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.36 E-value=9.9e-13 Score=117.12 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=83.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHhccccccCCCCCCCccchHHHHHHHHHHHHHhcCCCCCccchhhhHHHHHHhCCCCCCC
Q 023069 176 KGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWD 255 (287)
Q Consensus 176 ~~~~~~~E~~~T~~L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~i~~~~~~~~~ 255 (287)
..+.++.|+++|++|+++.+......+.... .....++..|+++.+.++..++.||+++|||++++..+.. ...|.
T Consensus 9 ~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~--~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g--~~~~~ 84 (263)
T 2b6o_A 9 FWRAIFAEFFATLFYVFFGLGASLRWAPGPL--HVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGS--QMSLL 84 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCSSSC--HHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTT--CSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhc--CCCHH
Confidence 3567999999999999998876533211110 0123578899999999999999999999999999999973 46789
Q ss_pred cceehhhhHHHHHHHHHHHHHHHhccC
Q 023069 256 DHWIFWAGPFIGAALAALYHQIVIRAI 282 (287)
Q Consensus 256 ~~wvy~vgP~~Gai~a~~~y~~~~~~~ 282 (287)
..|+||++|++|+++|+.+.+.++.++
T Consensus 85 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 85 RAICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999999998653
No 16
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.31 E-value=3.5e-12 Score=114.36 Aligned_cols=102 Identities=17% Similarity=0.167 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+..+.++.|+++||+|++.+++....... .. ...++.+|+.++...++.++.||+.+|||++++..+....-
T Consensus 167 s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~------~~--~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~ 238 (279)
T 2w2e_A 167 SRTRGLFLEAFGTAILCLTVLMLAVEKHR------AT--WFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSF 238 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSCST------TG--GGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCCC------Cc--CcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccc
Confidence 46788999999999999988765321111 11 12567788888888999999999999999999999987654
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhchhhH
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQKSQY 160 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~ 160 (287)
+..+|+||++|++|+++|+++...+...++
T Consensus 239 ~~~~WVy~vgPiiGa~la~~ly~~l~~~~~ 268 (279)
T 2w2e_A 239 PNYHWIYWLGPILGAFLAYSIWQMWKWLNY 268 (279)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 567899999999999999999887765443
No 17
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.30 E-value=6.5e-12 Score=110.02 Aligned_cols=98 Identities=17% Similarity=0.229 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhc-CC
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR-KL 129 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g-~~ 129 (287)
+.++.++.|+++||+|++..++.. .+.. ..+ ..++.+|+.++...+..++.||+.+|||++++..+.. ..
T Consensus 133 ~~~~~~~~E~i~T~~Lv~~i~~~~--d~~~-----~~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~ 203 (234)
T 2o9g_A 133 SMLSALVVELVLSAGFLLVIHGAT--DKFA-----PAG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGW 203 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHT--STTS-----CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc--CCCC-----ccc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCC
Confidence 468899999999999999887642 1111 111 2567888888889999999999999999999999974 44
Q ss_pred chhhHHHHHHHhhHHHHHHhHHHHhhch
Q 023069 130 SLTRAVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 130 ~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
.|..+|+||++|++|+++|+++.+.++.
T Consensus 204 ~~~~~Wv~~vgP~~Ga~la~~~y~~~~~ 231 (234)
T 2o9g_A 204 ALEQLWFFWVVPIVGGIIGGLIYRTLLE 231 (234)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCceeeeeehHHhHHHHHHHHHHHHHcC
Confidence 6779999999999999999999877654
No 18
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.29 E-value=6e-12 Score=111.36 Aligned_cols=97 Identities=21% Similarity=0.272 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHh-cCC
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLA-RKL 129 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~-g~~ 129 (287)
+..+.++.|+++||+|+++.++..- +.. ..+ ..++.+|+.++...++.++.||+.+|||+++++.+. +..
T Consensus 156 s~~~~f~~E~i~Tf~Lv~~il~~~d--~~~-----~~~--~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~ 226 (256)
T 3llq_A 156 SLVSALLIEIILTAFFLIVILGSTH--GRV-----PAG--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGW 226 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHS--TTS-----CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC--CCC-----Ccc--chhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCC
Confidence 5688999999999999998765431 111 111 246778888888888899999999999999999986 444
Q ss_pred chhhHHHHHHHhhHHHHHHhHHHHhhc
Q 023069 130 SLTRAVFYMIMQCLGAICGAAVVKGFQ 156 (287)
Q Consensus 130 ~~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 156 (287)
.|...|+||++|++|+++|+++...+.
T Consensus 227 ~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 227 ALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 577899999999999999999887764
No 19
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.28 E-value=1.2e-11 Score=110.11 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+..+.++.|+++||+|++.+++... ..... ..+. .++.+|+.+.+.....++.||+.+|||++++..+... .
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~d--~~~~~---~~~~--~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~ 199 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFASTD--SRRTS---PVGS--PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-R 199 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC--TTCCS---CCCC--HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-C
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc--ccCCC---ccch--HHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-C
Confidence 4678999999999999999876531 11110 1111 4577778887888888899999999999999999765 7
Q ss_pred hhh-HHHHHHHhhHHHHHHhHHHHhhch
Q 023069 131 LTR-AVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 131 ~~~-~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
|.. +|+||++|++|+++|+++...+..
T Consensus 200 ~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 227 (266)
T 3d9s_A 200 FSPAHWVFWVGPIVGAVLAAILYFYLLF 227 (266)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cccCEeeeehHHHHHHHHHHHHHHHHhC
Confidence 888 999999999999999999887754
No 20
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.25 E-value=1.6e-11 Score=110.97 Aligned_cols=99 Identities=17% Similarity=0.227 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+..+.++.|+++||+|++.+++... .+.. . ..+. .++.+|+.+.+.....++.||+.+|||++++..+... .
T Consensus 133 s~~~~f~~E~i~Tf~Lv~~Il~~~d-~~~~--~--~~~~--~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~ 204 (301)
T 2zz9_A 133 TAGHGLLVELIITFQLVFTIFASCD-DKRT--D--VTGS--VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-N 204 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSC-SSSS--C--CSSC--HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-C
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcC-CCCC--C--ccch--HhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-C
Confidence 4678999999999999998876421 1111 1 1111 4567777776677777789999999999999999865 7
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhch
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
|..+|+||++|++|+++|+++...++.
T Consensus 205 w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 205 WENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999888764
No 21
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.24 E-value=1.7e-11 Score=111.95 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+..+.++.|+++||+|++++++.... +.. . ..+. .++.+|+++.+.....++.||+.+|||++++..+... .
T Consensus 172 s~~~~f~~E~i~Tf~Lv~~Ila~~d~-~~~-~---~~~~--~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~ 243 (340)
T 3iyz_A 172 TAGHGLLVELIITFQLVFTIFASCDD-KRT-D---VTGS--VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-N 243 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcC-ccC-C---cccc--hhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-C
Confidence 46789999999999999988764321 111 0 0111 3566777776677777789999999999999999865 6
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhch
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
|...|+||+++++|+++|+++...++.
T Consensus 244 w~~~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 244 WENHWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred CCcEeehhHHHHHHHHHHHHHHHHHhC
Confidence 889999999999999999999887764
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.24 E-value=2.2e-11 Score=105.84 Aligned_cols=98 Identities=17% Similarity=0.241 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCc
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLS 130 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~ 130 (287)
+..+.++.|+++||+|++..+.... .+.. . ..+. .++.+|+.+.+.....++.||+.+|||++++..+... .
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~~-~~~~-~---~~~~--~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~ 195 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASCD-SKRT-D---VTGS--IALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-N 195 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTC-TTCS-C---CCSC--HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc-cccC-C---ccCC--ccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-C
Confidence 4578999999999999998766421 1111 1 1111 3566777776666666789999999999999999865 6
Q ss_pred hhhHHHHHHHhhHHHHHHhHHHHhhc
Q 023069 131 LTRAVFYMIMQCLGAICGAAVVKGFQ 156 (287)
Q Consensus 131 ~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 156 (287)
|.++|+||+++++|+++|+++.+.++
T Consensus 196 w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 196 WENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999887664
No 23
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.24 E-value=6e-12 Score=113.98 Aligned_cols=105 Identities=23% Similarity=0.248 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHh--cC
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLA--RK 128 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~--g~ 128 (287)
+..+.++.|+++||+|+++++... ..+.. ...... ....++.+|++++...++.++.||+.+|||++++..+. +.
T Consensus 183 s~~~~f~~E~i~TfiLv~~Il~~~-d~~~~-~~~~~~-~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~ 259 (304)
T 3cn5_A 183 NKGTALGAEIIGTFVLVYTVFSAT-DPKRS-ARDSHV-PILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSN 259 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTE-EEEEE-STTSCC-EEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCH
T ss_pred cHHHHHHHHHHHHHHHHHHHhhee-cCccC-CCCccc-ccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccC
Confidence 467899999999999999887421 11111 110000 01245778888888999999999999999999999997 23
Q ss_pred CchhhHHHHHHHhhHHHHHHhHHHHhhchh
Q 023069 129 LSLTRAVFYMIMQCLGAICGAAVVKGFQKS 158 (287)
Q Consensus 129 ~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~ 158 (287)
..|...|+||++|++|+++|+++...+..+
T Consensus 260 ~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 260 KVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999998877653
No 24
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.20 E-value=4.8e-11 Score=107.22 Aligned_cols=102 Identities=19% Similarity=0.196 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhc---
Q 023069 51 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLAR--- 127 (287)
Q Consensus 51 ~~~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g--- 127 (287)
+.++.++.|+++||+|++.+++... ..... ... ...++.+|+.++...+..++.||+.+|||++++..+..
T Consensus 144 s~~~~~~~E~i~Tf~Lv~~il~~~d--~~~~~--~~~--~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~ 217 (281)
T 1ldf_A 144 NFVQAFAVEMVITAILMGLILALTD--DGNGV--PRG--PLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLA 217 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC--TTSSS--CCG--GGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc--cCCCC--ccc--chHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhc
Confidence 4688999999999999999876531 11100 001 12567888888889999999999999999999998863
Q ss_pred ---CCchh------hHHHHHHHhhHHHHHHhHHHHhhchh
Q 023069 128 ---KLSLT------RAVFYMIMQCLGAICGAAVVKGFQKS 158 (287)
Q Consensus 128 ---~~~~~------~~~~Yi~aQ~lGa~~g~~~~~~~~~~ 158 (287)
...|. .+|+||++|++|+++|+++...+..+
T Consensus 218 g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~ 257 (281)
T 1ldf_A 218 GWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGR 257 (281)
T ss_dssp TTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred ccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCc
Confidence 22333 69999999999999999998887654
No 25
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.17 E-value=5.6e-11 Score=106.24 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchh
Q 023069 53 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLT 132 (287)
Q Consensus 53 ~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~ 132 (287)
.+.++.|+++||+|++.+++.. ...... ..+ ..++.+|+.+++.....++.||+.+|||++++..+... .|.
T Consensus 138 ~~~~~~E~i~T~~Lv~~i~~~~--d~~~~~---~~~--~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~ 209 (271)
T 1j4n_A 138 GQGLGIEIIGTLQLVLCVLATT--DRRRRD---LGG--SGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQ 209 (271)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHT--CSSCCC---CCS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhc--cccCCC---ccc--cHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCc
Confidence 4578899999999999876542 111110 111 14567777777666666789999999999999998865 688
Q ss_pred hHHHHHHHhhHHHHHHhHHHHhhch
Q 023069 133 RAVFYMIMQCLGAICGAAVVKGFQK 157 (287)
Q Consensus 133 ~~~~Yi~aQ~lGa~~g~~~~~~~~~ 157 (287)
.+|+||+++++|+++|+++...+..
T Consensus 210 ~~wv~~vgP~~Ga~la~~~y~~~~~ 234 (271)
T 1j4n_A 210 DHWIFWVGPFIGAALAVLIYDFILA 234 (271)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999887764
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.17 E-value=1.1e-10 Score=103.74 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcC----
Q 023069 53 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARK---- 128 (287)
Q Consensus 53 ~r~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~---- 128 (287)
.+.++.|+++||+|++.+++.... +.. .. ...+.+++.+|+.++......++.||+.+|||++++..+...
T Consensus 135 ~~~~~~E~i~Tf~Lv~~i~~~~d~-~~~-~~---~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g 209 (258)
T 3c02_A 135 TGAFFNELILTGILLLVILVVVDE-NIC-GK---FHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYG 209 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCH-HHH-CS---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc-ccC-Cc---ccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhcccc
Confidence 458999999999999998765321 110 00 111222788899998999999999999999999999999742
Q ss_pred -Cch----hhHHHHHHHhhHHHHHHhHHHHhhchhh
Q 023069 129 -LSL----TRAVFYMIMQCLGAICGAAVVKGFQKSQ 159 (287)
Q Consensus 129 -~~~----~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~ 159 (287)
..| ...|+||++|++|+++|+++...+..++
T Consensus 210 ~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~ 245 (258)
T 3c02_A 210 KDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL 245 (258)
T ss_dssp THHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence 245 4489999999999999999988876544
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=93.64 E-value=2.4 Score=37.44 Aligned_cols=104 Identities=9% Similarity=0.038 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhch--hh-------HHH
Q 023069 92 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQK--SQ-------YEM 162 (287)
Q Consensus 92 ~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~--~~-------~~~ 162 (287)
-++.+.+.+...++..+..-=+ |--.+ ...+.++++|.+.+--|.-=++|=++|++++-.+.. .. ...
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHH
Confidence 4555555555566555543222 32223 334578888887665554444555555444333211 00 100
Q ss_pred hcCCcccccCCCCCCCchhHHHHHHHHHHHHHHHhc
Q 023069 163 LGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT 198 (287)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~ 198 (287)
.-.....-.-+.+..+.|+-=.+|.++.++.++...
T Consensus 148 ~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 183 (285)
T 3kcu_A 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000001123456677777788888777777654
No 28
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=83.89 E-value=17 Score=31.90 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHhhccc-cccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhch--hhHHHhcC---
Q 023069 92 IAWAFGGMIFALVYCTAGI-SGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQK--SQYEMLGG--- 165 (287)
Q Consensus 92 ~~~~~g~~v~~~i~~~~~i-SGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~~--- 165 (287)
-++.+.+.+...++..+.. +|--+ .++ ..+.++++|.+.+--|.-=.+|=++|++++-.+.. ..+...++
T Consensus 70 ~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 145 (280)
T 3kly_A 70 GGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLG 145 (280)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHH
Confidence 4555666555566655543 34333 222 34568888888777766666666666655443321 10100000
Q ss_pred -C---cccccCCCCCCCchhHHHHHHHHHHHHHHHhc
Q 023069 166 -G---ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT 198 (287)
Q Consensus 166 -~---~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~ 198 (287)
. ...-.-+.+..+.|+-=.+|.++.++.++...
T Consensus 146 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 182 (280)
T 3kly_A 146 LNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTF 182 (280)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00001123456677777778887777777654
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=76.06 E-value=37 Score=29.44 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchh-------hHHHhc
Q 023069 92 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKS-------QYEMLG 164 (287)
Q Consensus 92 ~~~~~g~~v~~~i~~~~~iSGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~-------~~~~~~ 164 (287)
-++.+.+.+...++..+..-=+ |-......++.++.+|.+.+--|.-=.+|=++|++++-.+... .....-
T Consensus 67 ~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~~ 144 (268)
T 3tds_E 67 MGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEFF 144 (268)
T ss_dssp HHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHHH
Confidence 4455555554455443332111 3332224557788999888777666666666666554433210 110000
Q ss_pred CCcccccCCCCCCCchhHHHHHHHHHHHHHHHhc
Q 023069 165 GGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT 198 (287)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~E~~~T~~L~~~il~~~ 198 (287)
.....-.-+.+..+.|+-=.+|.++.++.++...
T Consensus 145 ~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 145 ANTAASKASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000123445667777777777777776543
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=54.22 E-value=60 Score=27.96 Aligned_cols=103 Identities=11% Similarity=0.073 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHhhccc-cccccchHHHHHHHHhcCCchhhHHHHHHHhhHHHHHHhHHHHhhchhh-HHHhcCCcc-
Q 023069 92 IAWAFGGMIFALVYCTAGI-SGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQ-YEMLGGGAN- 168 (287)
Q Consensus 92 ~~~~~g~~v~~~i~~~~~i-SGah~NPAvTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~-~~~~~~~~~- 168 (287)
-++.+.+.+...++..+.. +| |-.......+.|+.+|.+.+--|.-=.+|=++|++++-.+.... .........
T Consensus 61 ~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~ 137 (261)
T 4fc4_A 61 MGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSI 137 (261)
T ss_dssp HHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSH
T ss_pred HHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHH
Confidence 4455555544444433222 11 43322244556889998888777655556555555543332110 000000000
Q ss_pred --ccc---CCCCCCCchhHHHHHHHHHHHHHHHh
Q 023069 169 --MLS---KGYSKGDGLGAEIVGTFVLVYTVFSA 197 (287)
Q Consensus 169 --~~~---~~~~~~~~~~~E~~~T~~L~~~il~~ 197 (287)
... -+.+..+.|+-=.+|.++.++.++..
T Consensus 138 ~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 138 VHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01234556666667777777666654
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=52.12 E-value=2.3 Score=38.31 Aligned_cols=22 Identities=32% Similarity=0.523 Sum_probs=17.9
Q ss_pred hccccccccchHHHHHHHHhcC
Q 023069 107 TAGISGGHINPAVTFGLFLARK 128 (287)
Q Consensus 107 ~~~iSGah~NPAvTla~~l~g~ 128 (287)
.+.-||||++||++++-.+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 3445789999999999998754
Done!