Query 023070
Match_columns 287
No_of_seqs 329 out of 2508
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:51:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 3.1E-46 1.1E-50 346.6 24.1 252 4-264 53-315 (350)
2 1vhn_A Putative flavin oxidore 100.0 6.9E-46 2.3E-50 340.2 22.9 250 4-263 54-306 (318)
3 1z41_A YQJM, probable NADH-dep 100.0 7.5E-31 2.6E-35 242.2 17.0 162 21-182 144-322 (338)
4 3zwt_A Dihydroorotate dehydrog 100.0 9.3E-30 3.2E-34 236.7 18.7 167 8-181 146-342 (367)
5 3gr7_A NADPH dehydrogenase; fl 100.0 7.9E-30 2.7E-34 235.4 17.9 163 20-182 143-322 (340)
6 4ef8_A Dihydroorotate dehydrog 100.0 2.2E-30 7.4E-35 239.5 14.1 169 7-181 125-321 (354)
7 2r14_A Morphinone reductase; H 100.0 2.1E-29 7.2E-34 235.4 15.7 158 21-182 166-343 (377)
8 3kru_A NADH:flavin oxidoreduct 100.0 2.4E-29 8E-34 232.1 15.4 161 20-181 142-321 (343)
9 2hsa_B 12-oxophytodienoate red 100.0 4.3E-29 1.5E-33 235.0 15.7 161 21-182 171-363 (402)
10 3oix_A Putative dihydroorotate 100.0 1.2E-28 4E-33 227.3 16.9 166 7-181 127-319 (345)
11 1icp_A OPR1, 12-oxophytodienoa 100.0 5.3E-29 1.8E-33 232.7 14.1 159 21-182 167-345 (376)
12 1vyr_A Pentaerythritol tetrani 100.0 1.9E-28 6.5E-33 228.1 17.8 157 21-182 161-338 (364)
13 3hgj_A Chromate reductase; TIM 100.0 2E-28 6.9E-33 226.9 17.4 163 20-182 151-333 (349)
14 2gou_A Oxidoreductase, FMN-bin 100.0 2.9E-28 9.9E-33 226.9 18.2 157 21-182 161-337 (365)
15 1jub_A Dihydroorotate dehydrog 100.0 2.8E-28 9.5E-33 222.4 16.6 168 8-181 93-286 (311)
16 1f76_A Dihydroorotate dehydrog 100.0 3.9E-28 1.3E-32 223.7 17.6 167 8-181 133-333 (336)
17 3i65_A Dihydroorotate dehydrog 100.0 3.8E-28 1.3E-32 227.6 17.5 167 8-181 181-389 (415)
18 3l5a_A NADH/flavin oxidoreduct 100.0 2.7E-28 9.2E-33 230.5 13.7 161 21-183 170-362 (419)
19 1tv5_A Dhodehase, dihydroorota 100.0 2.2E-27 7.4E-32 225.1 18.0 167 8-181 179-417 (443)
20 2e6f_A Dihydroorotate dehydrog 99.9 1.1E-27 3.8E-32 218.7 14.4 169 7-181 92-288 (314)
21 3l5l_A Xenobiotic reductase A; 99.9 1.7E-27 5.7E-32 221.8 14.4 163 20-182 157-340 (363)
22 4ab4_A Xenobiotic reductase B; 99.9 3E-27 1E-31 219.4 14.5 152 20-182 152-323 (362)
23 1ps9_A 2,4-dienoyl-COA reducta 99.9 4.5E-27 1.5E-31 234.8 16.5 162 21-182 141-325 (671)
24 1o94_A Tmadh, trimethylamine d 99.9 3.8E-27 1.3E-31 237.4 15.4 163 20-183 148-337 (729)
25 3gka_A N-ethylmaleimide reduct 99.9 5.3E-27 1.8E-31 217.6 14.5 152 20-182 160-331 (361)
26 1ep3_A Dihydroorotate dehydrog 99.9 2.3E-26 7.9E-31 209.2 17.6 167 8-181 98-284 (311)
27 3k30_A Histamine dehydrogenase 99.9 1.1E-26 3.9E-31 232.6 14.2 161 21-182 156-339 (690)
28 3aty_A Tcoye, prostaglandin F2 99.9 1.3E-25 4.4E-30 209.8 17.6 158 18-182 171-351 (379)
29 3tjl_A NADPH dehydrogenase; OL 99.9 1.7E-25 5.9E-30 209.6 9.3 161 21-182 167-361 (407)
30 1gte_A Dihydropyrimidine dehyd 99.9 6.6E-24 2.3E-28 220.8 17.6 168 8-181 634-831 (1025)
31 4a3u_A NCR, NADH\:flavin oxido 99.9 5.1E-21 1.8E-25 177.6 14.5 161 20-183 151-331 (358)
32 3tjx_A Dihydroorotate dehydrog 99.8 2.8E-20 9.4E-25 172.5 16.3 170 6-181 124-321 (354)
33 2nli_A Lactate oxidase; flavoe 99.8 2E-19 7E-24 167.3 15.1 155 8-171 132-317 (368)
34 4gbu_A NADPH dehydrogenase 1; 99.8 1.2E-19 4.2E-24 170.7 10.8 163 21-183 172-364 (400)
35 1p0k_A Isopentenyl-diphosphate 99.8 2.1E-18 7.1E-23 159.6 17.8 154 7-174 115-287 (349)
36 2nzl_A Hydroxyacid oxidase 1; 99.8 2.9E-18 9.8E-23 160.7 12.9 157 7-172 145-341 (392)
37 2agk_A 1-(5-phosphoribosyl)-5- 99.7 3E-18 1E-22 152.3 8.0 152 9-181 75-253 (260)
38 1gox_A (S)-2-hydroxy-acid oxid 99.7 4E-17 1.4E-21 152.1 15.7 155 9-172 123-314 (370)
39 1kbi_A Cytochrome B2, L-LCR; f 99.7 3.9E-17 1.3E-21 157.7 16.1 157 7-172 245-437 (511)
40 1jvn_A Glutamine, bifunctional 99.7 3.7E-17 1.3E-21 159.7 12.7 170 9-182 326-541 (555)
41 2y88_A Phosphoribosyl isomeras 99.7 2.3E-16 8E-21 138.2 15.3 153 8-181 74-239 (244)
42 1mzh_A Deoxyribose-phosphate a 99.7 2.6E-16 8.8E-21 137.0 11.4 146 9-181 62-214 (225)
43 1vcf_A Isopentenyl-diphosphate 99.7 1.3E-15 4.3E-20 140.0 15.7 154 7-174 116-292 (332)
44 2z6i_A Trans-2-enoyl-ACP reduc 99.6 1.8E-15 6.3E-20 138.9 14.8 138 8-177 63-201 (332)
45 1vzw_A Phosphoribosyl isomeras 99.6 3.3E-15 1.1E-19 131.0 15.5 154 8-181 75-236 (244)
46 3tdn_A FLR symmetric alpha-bet 99.6 3.3E-16 1.1E-20 137.9 4.5 152 8-181 79-243 (247)
47 3o07_A Pyridoxine biosynthesis 99.6 1.2E-14 4E-19 127.9 13.2 147 11-175 14-237 (291)
48 1ka9_F Imidazole glycerol phos 99.6 6.7E-14 2.3E-18 123.1 17.2 152 8-181 75-239 (252)
49 2yzr_A Pyridoxal biosynthesis 99.6 6.6E-15 2.3E-19 132.8 9.2 143 25-175 28-281 (330)
50 1thf_D HISF protein; thermophI 99.6 1.3E-13 4.3E-18 121.4 17.0 152 8-181 74-238 (253)
51 1p4c_A L(+)-mandelate dehydrog 99.6 2.7E-14 9.4E-19 133.3 13.4 155 8-173 123-313 (380)
52 1qo2_A Molecule: N-((5-phospho 99.6 3.2E-14 1.1E-18 124.6 12.6 151 9-181 74-237 (241)
53 1ypf_A GMP reductase; GUAC, pu 99.5 5.4E-14 1.8E-18 129.3 13.6 142 8-172 94-244 (336)
54 2w6r_A Imidazole glycerol phos 99.5 1.3E-13 4.3E-18 122.3 14.7 152 8-181 74-243 (266)
55 3vkj_A Isopentenyl-diphosphate 99.5 9.5E-14 3.2E-18 128.9 13.6 153 8-171 119-300 (368)
56 1h5y_A HISF; histidine biosynt 99.5 4.1E-13 1.4E-17 117.3 15.7 152 8-180 77-240 (253)
57 2gjl_A Hypothetical protein PA 99.5 3.9E-13 1.3E-17 123.0 16.2 138 8-175 67-209 (328)
58 3bo9_A Putative nitroalkan dio 99.5 4.6E-13 1.6E-17 122.6 15.9 138 8-176 77-214 (326)
59 1eep_A Inosine 5'-monophosphat 99.5 2.9E-13 9.8E-18 127.4 12.9 145 10-179 143-297 (404)
60 3sr7_A Isopentenyl-diphosphate 99.5 6.9E-13 2.4E-17 122.8 14.9 154 8-172 144-312 (365)
61 3sgz_A Hydroxyacid oxidase 2; 99.5 3.1E-13 1.1E-17 124.2 12.1 158 8-174 121-308 (352)
62 2pgw_A Muconate cycloisomerase 99.4 3.3E-12 1.1E-16 119.3 17.7 148 8-181 136-285 (384)
63 1jcn_A Inosine monophosphate d 99.4 1.3E-12 4.4E-17 126.6 14.8 142 17-180 251-400 (514)
64 3bw2_A 2-nitropropane dioxygen 99.4 5E-12 1.7E-16 117.5 16.9 127 24-178 112-248 (369)
65 4fxs_A Inosine-5'-monophosphat 99.4 1.4E-12 4.8E-17 125.7 11.2 143 9-175 219-371 (496)
66 3tdn_A FLR symmetric alpha-bet 99.4 2.4E-12 8.2E-17 113.1 10.9 100 79-182 22-123 (247)
67 1y0e_A Putative N-acetylmannos 99.4 7.8E-12 2.7E-16 107.9 13.4 160 10-178 8-214 (223)
68 4avf_A Inosine-5'-monophosphat 99.3 5E-12 1.7E-16 121.7 12.8 136 16-175 224-369 (490)
69 2qjg_A Putative aldolase MJ040 99.3 1.5E-11 5E-16 109.5 14.4 151 7-180 78-250 (273)
70 3khj_A Inosine-5-monophosphate 99.3 8.6E-12 3E-16 115.5 13.2 148 7-179 94-248 (361)
71 3q58_A N-acetylmannosamine-6-p 99.3 1.5E-11 5.2E-16 107.0 12.6 127 24-178 92-220 (229)
72 1mdl_A Mandelate racemase; iso 99.3 3E-11 1E-15 111.8 15.1 147 8-179 133-282 (359)
73 3igs_A N-acetylmannosamine-6-p 99.3 2.1E-11 7.1E-16 106.4 12.7 126 24-177 92-219 (232)
74 2rdx_A Mandelate racemase/muco 99.3 6.3E-11 2.1E-15 110.4 16.0 144 8-180 134-280 (379)
75 3eez_A Putative mandelate race 99.3 6.3E-11 2.2E-15 110.5 15.6 146 6-180 132-280 (378)
76 1yxy_A Putative N-acetylmannos 99.3 2.2E-11 7.6E-16 105.9 11.5 156 8-175 17-222 (234)
77 2nv1_A Pyridoxal biosynthesis 99.3 6.2E-11 2.1E-15 107.4 14.7 153 9-174 22-245 (305)
78 2ovl_A Putative racemase; stru 99.3 5.7E-11 1.9E-15 110.4 14.3 137 19-180 146-285 (371)
79 2qdd_A Mandelate racemase/muco 99.2 9.4E-11 3.2E-15 109.2 14.8 145 7-180 133-280 (378)
80 2nql_A AGR_PAT_674P, isomerase 99.2 9.5E-11 3.2E-15 109.6 14.7 145 9-180 153-301 (388)
81 3r2g_A Inosine 5'-monophosphat 99.2 8.4E-11 2.9E-15 108.5 13.7 137 17-176 96-237 (361)
82 2p8b_A Mandelate racemase/muco 99.2 2.3E-10 7.7E-15 106.2 15.2 147 7-179 129-279 (369)
83 2hzg_A Mandelate racemase/muco 99.2 4E-10 1.4E-14 105.8 16.9 151 7-180 132-290 (401)
84 1rvk_A Isomerase/lactonizing e 99.2 6.9E-10 2.4E-14 103.4 17.4 139 18-175 148-290 (382)
85 1qo2_A Molecule: N-((5-phospho 99.2 4.4E-11 1.5E-15 104.5 7.4 97 79-180 13-115 (241)
86 2ps2_A Putative mandelate race 99.2 1.1E-09 3.9E-14 101.5 17.2 143 7-178 134-280 (371)
87 3usb_A Inosine-5'-monophosphat 99.2 2.5E-10 8.4E-15 110.4 13.0 141 11-175 247-396 (511)
88 1vrd_A Inosine-5'-monophosphat 99.1 2.2E-10 7.6E-15 110.3 12.4 138 20-179 236-381 (494)
89 1geq_A Tryptophan synthase alp 99.1 9.3E-10 3.2E-14 96.3 15.2 165 8-173 4-226 (248)
90 3ffs_A Inosine-5-monophosphate 99.1 5.9E-10 2E-14 104.2 14.5 130 24-177 147-285 (400)
91 3ozy_A Putative mandelate race 99.1 8.5E-10 2.9E-14 103.2 15.6 142 9-176 139-286 (389)
92 4gj1_A 1-(5-phosphoribosyl)-5- 99.1 1.1E-09 3.7E-14 96.1 15.0 151 9-179 74-236 (243)
93 2qr6_A IMP dehydrogenase/GMP r 99.1 4.8E-10 1.6E-14 104.9 13.5 148 8-175 155-314 (393)
94 1nu5_A Chloromuconate cycloiso 99.1 1.5E-09 5.1E-14 100.7 16.6 144 10-178 133-280 (370)
95 4fo4_A Inosine 5'-monophosphat 99.1 2.7E-10 9.2E-15 105.5 11.2 138 18-178 105-251 (366)
96 2gl5_A Putative dehydratase pr 99.1 9.1E-10 3.1E-14 103.5 15.0 146 8-166 129-298 (410)
97 1tkk_A Similar to chloromucona 99.1 1.6E-09 5.6E-14 100.2 16.1 142 9-175 130-276 (366)
98 2qgy_A Enolase from the enviro 99.1 1.4E-09 4.9E-14 101.7 15.3 141 14-179 143-287 (391)
99 2poz_A Putative dehydratase; o 99.0 1.2E-09 4E-14 102.2 12.1 140 17-166 135-279 (392)
100 3vnd_A TSA, tryptophan synthas 99.0 5.8E-09 2E-13 92.6 15.7 160 8-171 17-239 (267)
101 2zbt_A Pyridoxal biosynthesis 99.0 7.3E-09 2.5E-13 93.2 16.4 153 8-173 21-244 (297)
102 1xg4_A Probable methylisocitra 99.0 1.9E-09 6.4E-14 96.9 12.4 151 8-171 78-239 (295)
103 2c6q_A GMP reductase 2; TIM ba 99.0 5.6E-09 1.9E-13 96.3 15.1 143 10-175 108-260 (351)
104 2ox4_A Putative mandelate race 99.0 3.8E-09 1.3E-13 99.1 14.2 136 19-167 146-290 (403)
105 2og9_A Mandelate racemase/muco 99.0 5.1E-09 1.7E-13 98.0 14.8 124 19-167 162-288 (393)
106 1wv2_A Thiazole moeity, thiazo 99.0 1.4E-08 4.7E-13 88.7 16.3 147 9-175 74-226 (265)
107 2qde_A Mandelate racemase/muco 99.0 6.6E-09 2.2E-13 97.3 15.4 140 8-173 134-276 (397)
108 1thf_D HISF protein; thermophI 99.0 8.7E-10 3E-14 96.7 8.8 89 90-182 30-118 (253)
109 1wa3_A 2-keto-3-deoxy-6-phosph 99.0 1.7E-09 5.8E-14 91.9 10.2 138 8-172 9-183 (205)
110 3stp_A Galactonate dehydratase 99.0 8.7E-09 3E-13 97.0 16.0 147 7-172 166-316 (412)
111 2oz8_A MLL7089 protein; struct 99.0 1.6E-08 5.6E-13 94.4 17.7 123 19-167 145-273 (389)
112 3rcy_A Mandelate racemase/muco 99.0 8.6E-09 2.9E-13 97.6 15.2 148 18-179 145-296 (433)
113 1ka9_F Imidazole glycerol phos 99.0 1.2E-09 4E-14 95.7 8.7 89 90-182 31-119 (252)
114 2qq6_A Mandelate racemase/muco 99.0 1E-08 3.6E-13 96.3 15.0 134 19-167 149-291 (410)
115 2pp0_A L-talarate/galactarate 99.0 1.2E-08 4.3E-13 95.5 15.2 124 19-167 175-301 (398)
116 2o56_A Putative mandelate race 99.0 1E-08 3.5E-13 96.2 14.6 135 19-166 152-295 (407)
117 3rr1_A GALD, putative D-galact 98.9 1.3E-08 4.6E-13 95.5 14.5 149 7-172 113-264 (405)
118 2gdq_A YITF; mandelate racemas 98.9 1.3E-08 4.4E-13 94.9 14.0 134 9-167 124-266 (382)
119 3sbf_A Mandelate racemase / mu 98.9 1E-08 3.4E-13 96.2 13.3 161 7-177 121-292 (401)
120 1tzz_A Hypothetical protein L1 98.9 2E-08 6.8E-13 93.9 15.1 125 19-168 165-296 (392)
121 1qop_A Tryptophan synthase alp 98.9 3.5E-08 1.2E-12 87.6 15.8 158 8-172 16-239 (268)
122 3i4k_A Muconate lactonizing en 98.9 4.2E-08 1.4E-12 91.5 16.9 143 8-175 137-283 (383)
123 3nav_A Tryptophan synthase alp 98.9 1E-08 3.5E-13 91.2 11.9 160 8-171 19-241 (271)
124 3ro6_B Putative chloromuconate 98.9 1.3E-08 4.5E-13 94.0 12.9 138 8-171 129-270 (356)
125 3sjn_A Mandelate racemase/muco 98.9 1.3E-08 4.5E-13 94.6 12.9 126 19-167 146-275 (374)
126 3r4e_A Mandelate racemase/muco 98.9 9.1E-09 3.1E-13 97.1 11.7 157 7-173 131-307 (418)
127 2zad_A Muconate cycloisomerase 98.9 1.1E-07 3.8E-12 87.2 17.9 132 9-166 129-264 (345)
128 4dwd_A Mandelate racemase/muco 98.8 6E-08 2.1E-12 90.7 15.8 144 7-170 124-274 (393)
129 4e5t_A Mandelate racemase / mu 98.8 3.1E-08 1E-12 93.0 13.2 143 18-174 150-296 (404)
130 3jva_A Dipeptide epimerase; en 98.8 7.6E-08 2.6E-12 88.7 15.6 139 10-174 130-271 (354)
131 3bjs_A Mandelate racemase/muco 98.8 2.8E-08 9.7E-13 93.9 13.0 123 18-166 183-310 (428)
132 1rd5_A Tryptophan synthase alp 98.8 1.6E-07 5.6E-12 82.8 17.1 160 8-172 17-235 (262)
133 2y88_A Phosphoribosyl isomeras 98.8 8.8E-09 3E-13 89.7 8.2 87 91-182 32-118 (244)
134 1h5y_A HISF; histidine biosynt 98.8 1E-08 3.6E-13 89.1 8.5 89 90-182 33-121 (253)
135 3cwo_X Beta/alpha-barrel prote 98.8 3.2E-07 1.1E-11 78.2 17.4 89 90-182 130-218 (237)
136 3tji_A Mandelate racemase/muco 98.8 3.5E-08 1.2E-12 93.2 12.3 162 7-178 142-314 (422)
137 3qja_A IGPS, indole-3-glycerol 98.8 4.8E-07 1.6E-11 80.4 18.6 141 8-180 113-255 (272)
138 1vzw_A Phosphoribosyl isomeras 98.8 1.1E-08 3.7E-13 89.2 7.6 87 91-182 33-119 (244)
139 3q45_A Mandelate racemase/muco 98.8 1.8E-07 6.2E-12 86.7 16.1 132 10-167 131-265 (368)
140 3oa3_A Aldolase; structural ge 98.8 7.6E-08 2.6E-12 85.6 12.8 131 25-171 131-269 (288)
141 4e4u_A Mandalate racemase/muco 98.8 1.2E-07 4.1E-12 89.2 15.0 145 17-175 142-290 (412)
142 2v82_A 2-dehydro-3-deoxy-6-pho 98.8 9.2E-08 3.2E-12 81.6 12.8 149 7-173 5-182 (212)
143 2w6r_A Imidazole glycerol phos 98.8 2E-08 6.9E-13 88.6 8.8 88 90-181 30-120 (266)
144 2hxt_A L-fuconate dehydratase; 98.8 8.7E-08 3E-12 90.9 13.6 125 17-167 196-324 (441)
145 3tj4_A Mandelate racemase; eno 98.7 1.9E-07 6.5E-12 86.7 15.3 133 9-166 138-277 (372)
146 3my9_A Muconate cycloisomerase 98.7 2.2E-07 7.6E-12 86.3 15.4 141 8-173 135-278 (377)
147 3ugv_A Enolase; enzyme functio 98.7 2.3E-07 7.7E-12 86.7 15.5 135 8-167 157-300 (390)
148 3gd6_A Muconate cycloisomerase 98.7 2.2E-07 7.4E-12 86.9 15.2 145 8-180 127-281 (391)
149 3toy_A Mandelate racemase/muco 98.7 3.8E-07 1.3E-11 85.0 16.8 134 8-166 156-293 (383)
150 1viz_A PCRB protein homolog; s 98.7 1.2E-07 4.2E-12 82.7 12.4 141 25-182 24-226 (240)
151 3ddm_A Putative mandelate race 98.7 9.8E-08 3.4E-12 89.2 12.3 125 17-167 153-281 (392)
152 3fv9_G Mandelate racemase/muco 98.7 5.3E-07 1.8E-11 84.1 17.1 144 6-173 132-279 (386)
153 3f4w_A Putative hexulose 6 pho 98.7 2.7E-07 9.3E-12 78.5 13.8 143 8-176 53-196 (211)
154 3v3w_A Starvation sensing prot 98.7 2E-07 6.9E-12 88.0 14.2 155 7-174 137-314 (424)
155 3dg3_A Muconate cycloisomerase 98.7 3.2E-07 1.1E-11 84.9 15.1 134 7-166 127-265 (367)
156 3vcn_A Mannonate dehydratase; 98.7 1.5E-07 5.3E-12 88.8 13.1 156 7-175 138-316 (425)
157 4adt_A Pyridoxine biosynthetic 98.7 2.4E-07 8.1E-12 83.3 13.1 52 123-175 193-246 (297)
158 3i6e_A Muconate cycloisomerase 98.7 7.3E-07 2.5E-11 83.1 16.8 141 7-172 136-278 (385)
159 1sjd_A N-acylamino acid racema 98.7 2.5E-07 8.6E-12 85.5 13.5 129 9-166 130-262 (368)
160 3ngj_A Deoxyribose-phosphate a 98.7 1.6E-07 5.4E-12 81.6 10.9 128 25-171 100-235 (239)
161 1zfj_A Inosine monophosphate d 98.6 1.7E-07 6E-12 89.9 12.4 134 21-178 233-376 (491)
162 1chr_A Chloromuconate cycloiso 98.6 4.9E-07 1.7E-11 83.7 14.9 136 8-168 131-270 (370)
163 1h1y_A D-ribulose-5-phosphate 98.6 5.6E-07 1.9E-11 77.8 14.1 144 8-176 64-210 (228)
164 3tsm_A IGPS, indole-3-glycerol 98.6 1.9E-06 6.6E-11 76.4 17.4 142 8-181 120-263 (272)
165 1ujp_A Tryptophan synthase alp 98.6 2.5E-07 8.7E-12 82.2 11.6 155 10-173 17-235 (271)
166 3r12_A Deoxyribose-phosphate a 98.6 3.6E-07 1.2E-11 80.3 12.2 130 25-171 116-251 (260)
167 3t6c_A RSPA, putative MAND fam 98.6 4.8E-07 1.6E-11 85.8 14.0 160 7-176 143-330 (440)
168 3r0u_A Enzyme of enolase super 98.6 1.3E-06 4.4E-11 81.3 16.5 137 8-170 131-272 (379)
169 1xm3_A Thiazole biosynthesis p 98.6 5.1E-07 1.7E-11 79.9 12.9 145 9-175 66-215 (264)
170 4gj1_A 1-(5-phosphoribosyl)-5- 98.6 7E-08 2.4E-12 84.5 7.2 89 90-182 31-119 (243)
171 4e4f_A Mannonate dehydratase; 98.6 4.1E-07 1.4E-11 85.9 12.8 155 8-172 138-314 (426)
172 3ndo_A Deoxyribose-phosphate a 98.6 4.8E-07 1.7E-11 78.3 11.6 129 25-171 85-225 (231)
173 1r0m_A N-acylamino acid racema 98.6 6.3E-07 2.1E-11 83.1 12.9 128 10-166 138-268 (375)
174 3mqt_A Mandelate racemase/muco 98.5 1.1E-06 3.6E-11 82.2 14.4 146 7-175 131-290 (394)
175 1ub3_A Aldolase protein; schif 98.5 1.2E-06 4E-11 75.5 13.3 129 24-171 75-211 (220)
176 3vk5_A MOEO5; TIM barrel, tran 98.5 3.6E-07 1.2E-11 80.9 9.9 80 93-181 189-272 (286)
177 4af0_A Inosine-5'-monophosphat 98.5 1.9E-06 6.6E-11 82.4 15.5 132 16-171 276-417 (556)
178 4e8g_A Enolase, mandelate race 98.5 1.7E-06 5.8E-11 80.8 14.9 136 8-171 153-292 (391)
179 3go2_A Putative L-alanine-DL-g 98.5 1.6E-06 5.3E-11 81.5 14.7 139 18-168 142-293 (409)
180 2zc8_A N-acylamino acid racema 98.5 1.2E-06 4.1E-11 81.0 13.6 128 10-166 131-261 (369)
181 3vzx_A Heptaprenylglyceryl pho 98.5 7.1E-07 2.4E-11 77.1 10.9 83 89-181 139-222 (228)
182 1vc4_A Indole-3-glycerol phosp 98.5 1.6E-06 5.4E-11 76.3 13.4 139 8-180 106-249 (254)
183 2ekc_A AQ_1548, tryptophan syn 98.5 5.9E-06 2E-10 72.9 17.0 156 10-173 18-240 (262)
184 3tcs_A Racemase, putative; PSI 98.5 2.9E-06 9.9E-11 79.1 15.8 138 19-174 146-287 (388)
185 3tha_A Tryptophan synthase alp 98.5 4.4E-07 1.5E-11 79.6 9.5 155 10-171 15-231 (252)
186 1w8s_A FBP aldolase, fructose- 98.5 6E-06 2.1E-10 73.0 16.8 129 26-178 98-242 (263)
187 3mkc_A Racemase; metabolic pro 98.5 1.4E-06 4.7E-11 81.5 13.1 124 22-168 160-288 (394)
188 2qr6_A IMP dehydrogenase/GMP r 98.5 1E-06 3.6E-11 82.2 12.0 103 60-170 140-242 (393)
189 1ofd_A Ferredoxin-dependent gl 98.5 8.6E-07 2.9E-11 93.7 12.5 111 60-174 1011-1135(1520)
190 1ea0_A Glutamate synthase [NAD 98.5 8.4E-07 2.9E-11 93.6 12.1 109 61-173 977-1099(1479)
191 1yad_A Regulatory protein TENI 98.5 4.8E-07 1.6E-11 77.6 8.6 78 96-175 123-200 (221)
192 3mwc_A Mandelate racemase/muco 98.5 1.9E-06 6.4E-11 80.7 13.3 137 9-174 150-292 (400)
193 3dgb_A Muconate cycloisomerase 98.4 4.2E-06 1.4E-10 77.8 15.5 139 9-172 138-280 (382)
194 3fcp_A L-Ala-D/L-Glu epimerase 98.4 5.2E-06 1.8E-10 77.2 16.0 143 8-175 136-282 (381)
195 1me8_A Inosine-5'-monophosphat 98.4 1.8E-06 6E-11 83.3 13.2 121 29-172 250-386 (503)
196 3ovp_A Ribulose-phosphate 3-ep 98.4 2.6E-06 8.9E-11 73.8 12.9 148 10-176 6-206 (228)
197 1rpx_A Protein (ribulose-phosp 98.4 3.2E-06 1.1E-10 72.8 13.4 142 8-177 68-217 (230)
198 3ajx_A 3-hexulose-6-phosphate 98.4 6.5E-06 2.2E-10 69.6 14.7 140 8-175 53-194 (207)
199 2yw3_A 4-hydroxy-2-oxoglutarat 98.4 1E-06 3.4E-11 75.2 9.5 144 8-172 12-184 (207)
200 3p3b_A Mandelate racemase/muco 98.4 1E-06 3.5E-11 82.2 10.4 133 15-166 137-284 (392)
201 1tqj_A Ribulose-phosphate 3-ep 98.4 1.5E-06 5.1E-11 75.4 10.4 144 8-176 62-210 (230)
202 4hnl_A Mandelate racemase/muco 98.4 4.9E-06 1.7E-10 78.3 14.4 150 7-166 141-301 (421)
203 2p10_A MLL9387 protein; putati 98.4 6.4E-07 2.2E-11 79.1 7.7 159 7-174 93-266 (286)
204 2uva_G Fatty acid synthase bet 98.4 3.9E-06 1.3E-10 92.1 14.9 145 8-175 637-803 (2060)
205 3inp_A D-ribulose-phosphate 3- 98.3 2.6E-06 8.9E-11 74.5 10.7 148 10-176 29-232 (246)
206 1xi3_A Thiamine phosphate pyro 98.3 1E-06 3.5E-11 74.8 7.9 78 96-175 121-198 (215)
207 3ik4_A Mandelate racemase/muco 98.3 1.6E-05 5.3E-10 73.5 15.8 135 8-167 132-270 (365)
208 4a35_A Mitochondrial enolase s 98.3 1.2E-05 4E-10 76.3 15.3 127 17-169 199-331 (441)
209 2htm_A Thiazole biosynthesis p 98.2 1.6E-05 5.6E-10 69.5 13.4 144 9-172 64-212 (268)
210 1i4n_A Indole-3-glycerol phosp 98.2 3.8E-05 1.3E-09 67.3 15.6 140 8-180 101-243 (251)
211 1n7k_A Deoxyribose-phosphate a 98.2 1.2E-05 3.9E-10 69.8 12.0 128 24-172 92-228 (234)
212 4dye_A Isomerase; enolase fami 98.2 1.7E-05 5.9E-10 74.1 14.1 128 20-175 169-299 (398)
213 2fli_A Ribulose-phosphate 3-ep 98.2 9.3E-06 3.2E-10 69.2 11.1 141 8-176 61-207 (220)
214 3glc_A Aldolase LSRF; TIM barr 98.2 1.4E-05 4.9E-10 71.6 12.5 142 8-175 105-265 (295)
215 3o63_A Probable thiamine-phosp 98.2 3.7E-06 1.3E-10 73.5 8.2 81 96-178 148-230 (243)
216 3dip_A Enolase; structural gen 98.2 2.6E-05 8.7E-10 73.2 14.0 127 28-167 166-295 (410)
217 4a29_A Engineered retro-aldol 98.2 7.5E-05 2.6E-09 65.2 15.9 55 123-178 188-244 (258)
218 2tps_A Protein (thiamin phosph 98.1 4.8E-06 1.6E-10 71.3 7.8 78 96-175 129-208 (227)
219 1vcv_A Probable deoxyribose-ph 98.1 3.8E-05 1.3E-09 66.2 13.3 129 22-162 69-211 (226)
220 3w01_A Heptaprenylglyceryl pho 98.1 1.3E-05 4.4E-10 69.4 10.3 70 102-181 158-228 (235)
221 4dxk_A Mandelate racemase / mu 98.1 2.1E-05 7.1E-10 73.6 12.1 127 28-166 162-290 (400)
222 1jvn_A Glutamine, bifunctional 98.1 8.1E-06 2.8E-10 79.5 8.7 92 90-182 280-395 (555)
223 2f6u_A GGGPS, (S)-3-O-geranylg 98.1 7.1E-06 2.4E-10 71.2 7.2 73 94-176 149-227 (234)
224 2agk_A 1-(5-phosphoribosyl)-5- 98.0 5.5E-06 1.9E-10 73.1 5.2 81 90-182 38-123 (260)
225 2cu0_A Inosine-5'-monophosphat 98.0 3.8E-05 1.3E-09 73.6 11.3 124 24-172 231-362 (486)
226 1tqx_A D-ribulose-5-phosphate 98.0 6.6E-05 2.2E-09 64.8 11.7 138 8-175 64-209 (227)
227 2pge_A MENC; OSBS, NYSGXRC, PS 98.0 9.9E-05 3.4E-09 68.3 13.8 133 9-166 152-290 (377)
228 3ctl_A D-allulose-6-phosphate 98.0 4E-05 1.4E-09 66.4 10.0 139 8-175 57-204 (231)
229 1p1x_A Deoxyribose-phosphate a 97.9 4.2E-05 1.4E-09 67.3 9.8 129 24-177 89-230 (260)
230 1pii_A N-(5'phosphoribosyl)ant 97.9 0.00035 1.2E-08 66.1 16.5 141 8-181 108-250 (452)
231 2a4a_A Deoxyribose-phosphate a 97.9 9.1E-05 3.1E-09 65.7 11.3 120 24-158 110-246 (281)
232 3u9i_A Mandelate racemase/muco 97.9 0.00018 6.1E-09 67.1 13.8 141 9-166 155-299 (393)
233 1wuf_A Hypothetical protein LI 97.9 0.00014 4.8E-09 67.7 13.1 129 9-166 150-281 (393)
234 2uv8_G Fatty acid synthase sub 97.9 8.8E-05 3E-09 81.3 12.7 86 90-175 710-810 (2051)
235 3s5s_A Mandelate racemase/muco 97.8 0.00016 5.5E-09 67.3 12.5 133 9-166 134-270 (389)
236 1vhc_A Putative KHG/KDPG aldol 97.8 0.00019 6.3E-09 61.9 12.0 149 8-176 16-194 (224)
237 4eiv_A Deoxyribose-phosphate a 97.8 9.9E-05 3.4E-09 65.5 9.2 119 23-158 103-253 (297)
238 2chr_A Chloromuconate cycloiso 97.8 0.00063 2.2E-08 62.6 15.0 131 11-166 134-268 (370)
239 3cu2_A Ribulose-5-phosphate 3- 97.7 0.00011 3.8E-09 63.8 9.2 133 12-173 73-223 (237)
240 1to3_A Putative aldolase YIHT; 97.7 0.00057 1.9E-08 61.5 14.1 125 29-173 117-260 (304)
241 4hpn_A Putative uncharacterize 97.7 0.00051 1.8E-08 63.4 14.2 113 28-166 154-268 (378)
242 3ceu_A Thiamine phosphate pyro 97.7 5.7E-05 2E-09 64.2 6.9 76 96-174 101-179 (210)
243 4h1z_A Enolase Q92ZS5; dehydra 97.7 0.00048 1.6E-08 64.5 13.7 126 15-166 184-312 (412)
244 3ih1_A Methylisocitrate lyase; 97.6 0.0013 4.6E-08 59.0 14.8 146 8-171 89-247 (305)
245 3jr2_A Hexulose-6-phosphate sy 97.6 0.00016 5.4E-09 61.8 8.4 134 13-174 66-201 (218)
246 2ozt_A TLR1174 protein; struct 97.6 0.0012 4.1E-08 59.9 14.8 124 18-166 115-244 (332)
247 3qld_A Mandelate racemase/muco 97.6 0.0012 4.1E-08 61.3 15.0 131 8-167 137-270 (388)
248 3va8_A Probable dehydratase; e 97.6 0.00051 1.7E-08 65.0 12.5 122 18-167 190-314 (445)
249 1q6o_A Humps, 3-keto-L-gulonat 97.6 0.00054 1.8E-08 58.3 11.6 135 13-175 63-199 (216)
250 3vdg_A Probable glucarate dehy 97.6 0.00066 2.3E-08 64.2 13.2 126 18-171 192-320 (445)
251 1wue_A Mandelate racemase/muco 97.6 0.00065 2.2E-08 63.0 12.8 128 10-166 151-281 (386)
252 1wbh_A KHG/KDPG aldolase; lyas 97.6 0.00028 9.5E-09 60.3 9.4 150 8-176 15-193 (214)
253 3zen_D Fatty acid synthase; tr 97.6 0.00014 4.6E-09 82.6 9.0 78 95-175 556-654 (3089)
254 3vc5_A Mandelate racemase/muco 97.5 0.00092 3.1E-08 63.2 13.0 122 18-167 187-311 (441)
255 3kts_A Glycerol uptake operon 97.5 0.00033 1.1E-08 58.7 8.7 68 94-173 118-185 (192)
256 4h83_A Mandelate racemase/muco 97.5 0.00061 2.1E-08 63.3 11.1 126 17-166 162-290 (388)
257 4h2h_A Mandelate racemase/muco 97.4 0.0024 8.1E-08 59.0 13.8 132 7-166 138-273 (376)
258 1ypf_A GMP reductase; GUAC, pu 97.4 0.0015 5.3E-08 59.4 12.0 98 59-167 78-177 (336)
259 3khj_A Inosine-5-monophosphate 97.4 0.0012 4.2E-08 60.7 11.3 95 60-167 79-173 (361)
260 1mxs_A KDPG aldolase; 2-keto-3 97.4 0.00048 1.6E-08 59.3 8.0 148 9-176 26-203 (225)
261 2czd_A Orotidine 5'-phosphate 97.4 0.0027 9.1E-08 53.6 12.4 127 12-175 57-193 (208)
262 4e38_A Keto-hydroxyglutarate-a 97.3 0.0012 4E-08 57.1 10.1 148 9-177 34-211 (232)
263 3lab_A Putative KDPG (2-keto-3 97.3 0.00085 2.9E-08 57.3 9.0 153 7-178 11-197 (217)
264 3cyj_A Mandelate racemase/muco 97.3 0.0066 2.3E-07 55.8 15.7 120 19-166 144-269 (372)
265 1vc4_A Indole-3-glycerol phosp 97.3 0.0045 1.5E-07 54.1 13.7 76 90-172 65-140 (254)
266 2ze3_A DFA0005; organic waste 97.3 0.0074 2.5E-07 53.4 15.0 140 9-171 77-236 (275)
267 1qap_A Quinolinic acid phospho 97.3 0.0014 5E-08 58.6 10.2 91 64-175 195-288 (296)
268 3eoo_A Methylisocitrate lyase; 97.3 0.0034 1.2E-07 56.1 12.5 149 8-171 83-243 (298)
269 3ijl_A Muconate cycloisomerase 97.2 0.0028 9.7E-08 57.6 11.6 124 13-166 128-252 (338)
270 2hjp_A Phosphonopyruvate hydro 97.2 0.009 3.1E-07 53.2 14.5 147 8-171 75-239 (290)
271 2opj_A O-succinylbenzoate-COA 97.2 0.0019 6.7E-08 58.5 10.3 138 9-173 70-209 (327)
272 1zlp_A PSR132, petal death pro 97.2 0.0085 2.9E-07 54.0 14.1 146 8-171 101-261 (318)
273 3mzn_A Glucarate dehydratase; 97.1 0.0054 1.9E-07 58.0 13.3 124 17-166 180-310 (450)
274 3p0w_A Mandelate racemase/muco 97.1 0.0036 1.2E-07 59.6 12.1 124 17-166 198-328 (470)
275 2h6r_A Triosephosphate isomera 97.1 0.00077 2.6E-08 57.7 6.7 107 63-178 99-210 (219)
276 3v5c_A Mandelate racemase/muco 97.1 0.0019 6.6E-08 60.0 9.6 128 20-166 149-284 (392)
277 3b8i_A PA4872 oxaloacetate dec 97.1 0.0086 2.9E-07 53.3 13.0 144 8-171 82-238 (287)
278 3exr_A RMPD (hexulose-6-phosph 97.0 0.0035 1.2E-07 53.6 9.7 136 13-175 65-204 (221)
279 1x1o_A Nicotinate-nucleotide p 97.0 0.0065 2.2E-07 54.0 11.6 90 66-176 184-277 (286)
280 3e96_A Dihydrodipicolinate syn 97.0 0.0079 2.7E-07 54.2 12.0 124 19-157 31-159 (316)
281 3r2g_A Inosine 5'-monophosphat 96.9 0.0015 5E-08 60.1 7.1 70 90-167 99-169 (361)
282 2b7n_A Probable nicotinate-nuc 96.9 0.0024 8.1E-08 56.5 8.0 91 65-176 169-266 (273)
283 3igs_A N-acetylmannosamine-6-p 96.9 0.0071 2.4E-07 52.1 10.9 104 62-180 5-121 (232)
284 2vc6_A MOSA, dihydrodipicolina 96.9 0.02 6.9E-07 50.9 14.2 126 18-157 18-152 (292)
285 3l21_A DHDPS, dihydrodipicolin 96.9 0.028 9.7E-07 50.3 15.0 131 19-163 34-173 (304)
286 3d0c_A Dihydrodipicolinate syn 96.9 0.012 4.1E-07 53.0 12.5 125 18-157 30-159 (314)
287 3tsm_A IGPS, indole-3-glycerol 96.9 0.0037 1.3E-07 55.2 8.8 77 90-173 79-155 (272)
288 3nl6_A Thiamine biosynthetic b 96.8 0.0021 7.3E-08 62.2 7.4 83 94-177 119-219 (540)
289 3pfr_A Mandelate racemase/muco 96.8 0.01 3.4E-07 56.3 11.9 123 18-166 184-313 (455)
290 3lab_A Putative KDPG (2-keto-3 96.8 0.008 2.7E-07 51.2 10.1 91 77-181 13-103 (217)
291 2okt_A OSB synthetase, O-succi 96.8 0.01 3.6E-07 53.9 11.6 123 10-167 121-244 (342)
292 1xky_A Dihydrodipicolinate syn 96.8 0.04 1.4E-06 49.2 15.2 126 19-158 31-165 (301)
293 2ehh_A DHDPS, dihydrodipicolin 96.7 0.053 1.8E-06 48.2 15.6 124 19-156 19-151 (294)
294 2yxg_A DHDPS, dihydrodipicolin 96.7 0.046 1.6E-06 48.5 15.1 125 18-156 18-151 (289)
295 1o5k_A DHDPS, dihydrodipicolin 96.7 0.043 1.5E-06 49.1 15.0 124 19-156 31-163 (306)
296 3flu_A DHDPS, dihydrodipicolin 96.7 0.044 1.5E-06 48.8 14.9 125 19-157 26-159 (297)
297 2rfg_A Dihydrodipicolinate syn 96.7 0.033 1.1E-06 49.7 14.1 126 18-157 18-152 (297)
298 1vs1_A 3-deoxy-7-phosphoheptul 96.7 0.028 9.7E-07 49.6 13.4 111 53-170 127-245 (276)
299 1gox_A (S)-2-hydroxy-acid oxid 96.7 0.026 8.9E-07 51.9 13.7 89 77-167 123-253 (370)
300 3si9_A DHDPS, dihydrodipicolin 96.7 0.045 1.6E-06 49.2 15.0 125 19-157 41-174 (315)
301 2v9d_A YAGE; dihydrodipicolini 96.7 0.045 1.6E-06 49.8 15.1 125 18-156 49-182 (343)
302 3q58_A N-acetylmannosamine-6-p 96.7 0.072 2.5E-06 45.6 15.6 117 18-166 33-155 (229)
303 3m5v_A DHDPS, dihydrodipicolin 96.7 0.057 2E-06 48.1 15.5 133 18-164 25-168 (301)
304 2r8w_A AGR_C_1641P; APC7498, d 96.7 0.035 1.2E-06 50.3 14.1 131 19-163 53-192 (332)
305 1s2w_A Phosphoenolpyruvate pho 96.7 0.029 1E-06 50.0 13.3 146 8-171 79-242 (295)
306 1zco_A 2-dehydro-3-deoxyphosph 96.7 0.015 5.1E-07 51.0 11.2 109 54-170 113-230 (262)
307 3na8_A Putative dihydrodipicol 96.7 0.048 1.6E-06 49.0 14.7 123 19-155 43-174 (315)
308 3qja_A IGPS, indole-3-glycerol 96.7 0.0042 1.5E-07 54.9 7.6 79 90-175 72-150 (272)
309 3lye_A Oxaloacetate acetyl hyd 96.7 0.027 9.2E-07 50.5 12.9 145 8-171 88-251 (307)
310 1vr6_A Phospho-2-dehydro-3-deo 96.6 0.014 4.9E-07 53.2 11.0 110 54-170 196-313 (350)
311 1o60_A 2-dehydro-3-deoxyphosph 96.6 0.025 8.5E-07 50.4 12.2 111 52-170 113-242 (292)
312 3daq_A DHDPS, dihydrodipicolin 96.6 0.053 1.8E-06 48.2 14.5 125 19-157 21-154 (292)
313 3qze_A DHDPS, dihydrodipicolin 96.6 0.05 1.7E-06 48.9 14.4 125 19-157 42-175 (314)
314 4fo4_A Inosine 5'-monophosphat 96.6 0.014 4.9E-07 53.6 10.8 97 60-167 80-177 (366)
315 3iv3_A Tagatose 1,6-diphosphat 96.5 0.045 1.5E-06 49.5 13.6 134 29-174 119-287 (332)
316 2wkj_A N-acetylneuraminate lya 96.5 0.052 1.8E-06 48.5 14.0 132 19-164 30-171 (303)
317 4g8t_A Glucarate dehydratase; 96.5 0.031 1.1E-06 53.0 13.2 125 19-166 202-330 (464)
318 3o1n_A 3-dehydroquinate dehydr 96.5 0.16 5.3E-06 44.8 16.8 138 8-167 38-196 (276)
319 1o4u_A Type II quinolic acid p 96.5 0.0062 2.1E-07 54.1 7.6 94 65-176 180-277 (285)
320 3cpr_A Dihydrodipicolinate syn 96.5 0.064 2.2E-06 47.9 14.4 126 18-157 34-168 (304)
321 3f4w_A Putative hexulose 6 pho 96.5 0.067 2.3E-06 44.6 13.8 122 18-168 10-135 (211)
322 2yci_X 5-methyltetrahydrofolat 96.5 0.019 6.6E-07 50.6 10.7 93 21-142 34-130 (271)
323 2qiw_A PEP phosphonomutase; st 96.5 0.014 4.8E-07 51.0 9.7 139 9-169 81-238 (255)
324 4e38_A Keto-hydroxyglutarate-a 96.5 0.025 8.5E-07 48.7 11.1 99 66-181 26-124 (232)
325 1f6k_A N-acetylneuraminate lya 96.5 0.065 2.2E-06 47.6 14.1 127 18-158 21-157 (293)
326 2qkf_A 3-deoxy-D-manno-octulos 96.4 0.019 6.6E-07 50.8 10.5 112 52-171 110-240 (280)
327 3sr7_A Isopentenyl-diphosphate 96.4 0.008 2.7E-07 55.3 8.2 87 76-167 144-237 (365)
328 3fok_A Uncharacterized protein 96.4 0.03 1E-06 49.9 11.5 117 30-172 138-278 (307)
329 3b4u_A Dihydrodipicolinate syn 96.4 0.091 3.1E-06 46.6 14.7 126 18-156 21-158 (294)
330 3sz8_A 2-dehydro-3-deoxyphosph 96.4 0.041 1.4E-06 48.7 12.2 110 52-169 115-243 (285)
331 2ojp_A DHDPS, dihydrodipicolin 96.4 0.047 1.6E-06 48.5 12.7 126 18-157 19-153 (292)
332 3fkr_A L-2-keto-3-deoxyarabona 96.4 0.049 1.7E-06 48.8 12.9 129 18-157 26-162 (309)
333 1vqt_A Orotidine 5'-phosphate 96.4 0.05 1.7E-06 46.1 12.3 128 9-175 59-200 (213)
334 3nvt_A 3-deoxy-D-arabino-heptu 96.4 0.029 1E-06 51.9 11.6 110 54-169 232-348 (385)
335 3vav_A 3-methyl-2-oxobutanoate 96.4 0.18 6.3E-06 44.3 16.1 113 13-143 32-148 (275)
336 3fs2_A 2-dehydro-3-deoxyphosph 96.4 0.077 2.6E-06 47.2 13.8 110 52-170 136-263 (298)
337 3tak_A DHDPS, dihydrodipicolin 96.4 0.044 1.5E-06 48.6 12.4 125 19-157 20-153 (291)
338 3a5f_A Dihydrodipicolinate syn 96.3 0.043 1.5E-06 48.7 12.2 126 18-157 19-153 (291)
339 2jbm_A Nicotinate-nucleotide p 96.3 0.0029 9.8E-08 56.7 4.5 92 65-177 184-282 (299)
340 3vnd_A TSA, tryptophan synthas 96.3 0.045 1.5E-06 48.1 12.1 113 63-175 4-138 (267)
341 4adt_A Pyridoxine biosynthetic 96.3 0.012 4.1E-07 52.6 8.5 88 93-182 31-121 (297)
342 1p0k_A Isopentenyl-diphosphate 96.3 0.038 1.3E-06 50.2 11.9 90 74-167 114-209 (349)
343 3fa4_A 2,3-dimethylmalate lyas 96.3 0.076 2.6E-06 47.4 13.4 145 8-171 80-243 (302)
344 1vkf_A Glycerol uptake operon 96.3 0.011 3.7E-07 49.2 7.3 65 94-173 119-183 (188)
345 3sgz_A Hydroxyacid oxidase 2; 96.2 0.011 3.8E-07 54.0 7.9 43 123-167 203-245 (352)
346 3h5d_A DHDPS, dihydrodipicolin 96.2 0.11 3.6E-06 46.7 14.3 126 19-158 26-161 (311)
347 2wqp_A Polysialic acid capsule 96.2 0.083 2.9E-06 48.1 13.4 107 53-170 130-237 (349)
348 3ekg_A Mandelate racemase/muco 96.2 0.032 1.1E-06 52.0 10.9 117 30-166 171-292 (404)
349 1nsj_A PRAI, phosphoribosyl an 96.2 0.071 2.4E-06 44.9 12.1 128 15-175 60-188 (205)
350 1jpd_X L-Ala-D/L-Glu epimerase 96.2 0.017 5.8E-07 52.0 8.8 121 14-166 127-249 (324)
351 1kcz_A Beta-methylaspartase; b 96.2 0.014 4.9E-07 54.4 8.4 145 7-167 165-331 (413)
352 3ajx_A 3-hexulose-6-phosphate 96.1 0.096 3.3E-06 43.5 12.5 132 10-169 2-136 (207)
353 3jr2_A Hexulose-6-phosphate sy 96.0 0.11 3.8E-06 43.8 12.9 128 10-168 8-140 (218)
354 3nav_A Tryptophan synthase alp 96.0 0.075 2.6E-06 46.7 12.0 110 63-172 6-137 (271)
355 3s5o_A 4-hydroxy-2-oxoglutarat 96.0 0.11 3.9E-06 46.3 13.5 127 19-157 33-168 (307)
356 1m3u_A 3-methyl-2-oxobutanoate 96.0 0.18 6.1E-06 44.1 14.2 136 13-166 20-180 (264)
357 1h1y_A D-ribulose-5-phosphate 96.0 0.04 1.4E-06 46.9 10.0 136 9-168 7-146 (228)
358 3c2e_A Nicotinate-nucleotide p 96.0 0.0042 1.4E-07 55.5 3.9 91 65-176 186-286 (294)
359 3eb2_A Putative dihydrodipicol 96.0 0.035 1.2E-06 49.5 10.0 124 19-156 23-155 (300)
360 1o66_A 3-methyl-2-oxobutanoate 96.0 0.081 2.8E-06 46.5 11.9 105 19-167 93-214 (275)
361 4avf_A Inosine-5'-monophosphat 95.9 0.018 6.1E-07 55.0 8.1 70 90-167 228-298 (490)
362 2gjl_A Hypothetical protein PA 95.9 0.071 2.4E-06 47.9 11.8 95 59-168 50-147 (328)
363 1f6y_A 5-methyltetrahydrofolat 95.9 0.069 2.4E-06 46.7 11.2 95 19-142 23-121 (262)
364 2nli_A Lactate oxidase; flavoe 95.9 0.075 2.6E-06 48.8 12.0 90 76-167 132-257 (368)
365 3ffs_A Inosine-5-monophosphate 95.9 0.026 8.9E-07 52.5 8.8 67 93-167 146-212 (400)
366 1tqj_A Ribulose-phosphate 3-ep 95.9 0.019 6.3E-07 49.3 7.1 133 11-168 7-142 (230)
367 1qpo_A Quinolinate acid phosph 95.9 0.041 1.4E-06 48.8 9.5 93 65-175 182-277 (284)
368 3qfe_A Putative dihydrodipicol 95.8 0.11 3.8E-06 46.7 12.5 127 19-157 30-166 (318)
369 3tml_A 2-dehydro-3-deoxyphosph 95.8 0.071 2.4E-06 47.3 10.9 109 52-169 112-244 (288)
370 3dz1_A Dihydrodipicolinate syn 95.8 0.18 6.1E-06 45.2 13.8 125 18-157 26-160 (313)
371 1vli_A Spore coat polysacchari 95.8 0.14 4.9E-06 47.1 13.3 101 53-162 140-243 (385)
372 1o66_A 3-methyl-2-oxobutanoate 95.8 0.22 7.5E-06 43.8 13.9 112 13-142 20-136 (275)
373 3ru6_A Orotidine 5'-phosphate 95.8 0.36 1.2E-05 43.1 15.5 127 19-177 88-240 (303)
374 1jub_A Dihydroorotate dehydrog 95.8 0.17 5.9E-06 44.9 13.5 104 62-167 77-192 (311)
375 4aaj_A N-(5'-phosphoribosyl)an 95.8 0.19 6.5E-06 43.0 13.1 130 10-171 72-206 (228)
376 2p3z_A L-rhamnonate dehydratas 95.8 0.06 2E-06 50.3 10.7 95 61-166 205-303 (415)
377 3iwp_A Copper homeostasis prot 95.8 0.21 7.4E-06 44.1 13.6 135 11-167 40-186 (287)
378 2nwr_A 2-dehydro-3-deoxyphosph 95.7 0.069 2.4E-06 46.9 10.4 109 52-170 99-225 (267)
379 3paj_A Nicotinate-nucleotide p 95.7 0.057 2E-06 48.5 9.9 90 65-175 219-311 (320)
380 3q94_A Fructose-bisphosphate a 95.7 0.17 5.9E-06 44.8 12.9 162 7-170 44-239 (288)
381 1zfj_A Inosine monophosphate d 95.7 0.023 7.9E-07 54.0 7.7 70 91-168 233-303 (491)
382 2nuw_A 2-keto-3-deoxygluconate 95.7 0.17 5.8E-06 44.7 12.9 124 18-155 17-147 (288)
383 3ih1_A Methylisocitrate lyase; 95.7 0.11 3.9E-06 46.4 11.7 158 13-181 32-207 (305)
384 1rpx_A Protein (ribulose-phosp 95.7 0.062 2.1E-06 45.6 9.7 129 11-166 13-146 (230)
385 2fym_A Enolase; RNA degradosom 95.7 0.028 9.4E-07 52.8 8.1 72 85-166 265-340 (431)
386 1y0e_A Putative N-acetylmannos 95.7 0.055 1.9E-06 45.6 9.3 83 77-174 7-102 (223)
387 2r91_A 2-keto-3-deoxy-(6-phosp 95.7 0.18 6.2E-06 44.5 13.0 122 19-154 17-145 (286)
388 1kbi_A Cytochrome B2, L-LCR; f 95.6 0.12 4.2E-06 49.5 12.6 90 76-167 246-371 (511)
389 1jcn_A Inosine monophosphate d 95.6 0.025 8.7E-07 54.2 7.9 70 91-168 255-325 (514)
390 1kko_A 3-methylaspartate ammon 95.6 0.068 2.3E-06 49.8 10.6 98 64-166 218-330 (413)
391 1ep3_A Dihydroorotate dehydrog 95.6 0.059 2E-06 47.8 9.7 101 65-166 86-195 (311)
392 2v82_A 2-dehydro-3-deoxy-6-pho 95.6 0.035 1.2E-06 46.5 7.8 89 76-178 6-95 (212)
393 4fxs_A Inosine-5'-monophosphat 95.6 0.023 7.8E-07 54.4 7.3 70 90-167 230-300 (496)
394 4dbe_A Orotidine 5'-phosphate 95.6 0.18 6E-06 43.0 12.1 136 10-175 55-195 (222)
395 2ze3_A DFA0005; organic waste 95.6 0.15 5.2E-06 44.9 12.0 149 27-181 29-200 (275)
396 1w3i_A EDA, 2-keto-3-deoxy glu 95.5 0.21 7.2E-06 44.3 13.0 123 18-154 17-146 (293)
397 1oy0_A Ketopantoate hydroxymet 95.5 0.11 3.8E-06 45.8 10.9 105 19-167 110-232 (281)
398 1yxy_A Putative N-acetylmannos 95.5 0.11 3.8E-06 44.1 10.7 93 65-174 8-115 (234)
399 3fxg_A Rhamnonate dehydratase; 95.5 0.048 1.6E-06 51.6 9.0 117 31-166 178-297 (455)
400 3tqv_A Nicotinate-nucleotide p 95.5 0.05 1.7E-06 48.2 8.5 90 65-175 186-278 (287)
401 3vkj_A Isopentenyl-diphosphate 95.5 0.041 1.4E-06 50.6 8.2 89 74-166 117-217 (368)
402 2hmc_A AGR_L_411P, dihydrodipi 95.4 0.38 1.3E-05 43.7 14.6 126 18-157 44-177 (344)
403 3tqp_A Enolase; energy metabol 95.4 0.1 3.5E-06 48.9 11.0 98 59-166 216-336 (428)
404 1r6w_A OSB synthase, O-succiny 95.4 0.015 5.2E-07 52.3 5.0 120 17-166 113-236 (322)
405 1rvg_A Fructose-1,6-bisphospha 95.4 0.32 1.1E-05 43.4 13.5 154 7-162 40-227 (305)
406 1tx2_A DHPS, dihydropteroate s 95.3 0.093 3.2E-06 46.8 9.9 89 8-107 38-139 (297)
407 2zbt_A Pyridoxal biosynthesis 95.3 0.069 2.4E-06 47.3 9.0 98 76-182 21-121 (297)
408 1vrd_A Inosine-5'-monophosphat 95.3 0.043 1.5E-06 52.2 8.1 71 90-168 236-307 (494)
409 1gte_A Dihydropyrimidine dehyd 95.3 0.23 8E-06 51.5 14.1 102 65-166 622-734 (1025)
410 3iwp_A Copper homeostasis prot 95.3 0.25 8.6E-06 43.6 12.2 132 18-171 105-243 (287)
411 1gvf_A Tagatose-bisphosphate a 95.2 0.42 1.4E-05 42.3 13.7 160 8-170 42-235 (286)
412 3k13_A 5-methyltetrahydrofolat 95.2 0.083 2.8E-06 47.2 9.2 97 19-142 35-138 (300)
413 2isw_A Putative fructose-1,6-b 95.2 0.19 6.4E-06 45.2 11.5 155 7-162 41-229 (323)
414 3bo9_A Putative nitroalkan dio 95.2 0.16 5.6E-06 45.6 11.3 90 60-166 61-150 (326)
415 3n9r_A Fructose-bisphosphate a 95.2 0.23 7.9E-06 44.3 11.9 71 92-162 157-229 (307)
416 1v5x_A PRA isomerase, phosphor 95.2 0.22 7.6E-06 41.8 11.3 124 15-175 59-182 (203)
417 3m47_A Orotidine 5'-phosphate 95.1 0.48 1.6E-05 40.4 13.5 127 18-176 75-211 (228)
418 1dbt_A Orotidine 5'-phosphate 95.1 0.59 2E-05 39.9 14.2 130 13-175 61-222 (239)
419 1eep_A Inosine 5'-monophosphat 95.1 0.047 1.6E-06 50.7 7.6 69 91-167 153-222 (404)
420 3ctl_A D-allulose-6-phosphate 95.1 0.072 2.5E-06 45.7 8.2 127 11-166 3-134 (231)
421 2vef_A Dihydropteroate synthas 95.1 0.059 2E-06 48.4 7.9 80 19-112 31-115 (314)
422 2yyu_A Orotidine 5'-phosphate 95.1 0.62 2.1E-05 40.0 14.2 130 13-175 62-223 (246)
423 1m3u_A 3-methyl-2-oxobutanoate 95.1 0.13 4.5E-06 45.0 9.8 105 19-167 92-214 (264)
424 2hjp_A Phosphonopyruvate hydro 95.1 0.46 1.6E-05 42.1 13.5 160 14-181 19-199 (290)
425 2nzl_A Hydroxyacid oxidase 1; 95.0 0.19 6.4E-06 46.5 11.4 90 76-167 146-280 (392)
426 1eye_A DHPS 1, dihydropteroate 95.0 0.14 4.6E-06 45.3 9.9 81 19-111 27-109 (280)
427 1p4c_A L(+)-mandelate dehydrog 95.0 0.35 1.2E-05 44.4 13.2 43 123-167 211-253 (380)
428 3caw_A O-succinylbenzoate synt 95.0 0.03 1E-06 50.6 5.8 122 9-166 99-227 (330)
429 3noy_A 4-hydroxy-3-methylbut-2 95.0 0.27 9.1E-06 44.7 11.7 116 88-215 44-176 (366)
430 3gnn_A Nicotinate-nucleotide p 94.9 0.065 2.2E-06 47.7 7.6 89 66-175 198-289 (298)
431 1oy0_A Ketopantoate hydroxymet 94.9 0.87 3E-05 40.1 14.8 111 13-141 37-153 (281)
432 2yr1_A 3-dehydroquinate dehydr 94.9 1.7 5.8E-05 37.6 17.2 140 8-167 18-176 (257)
433 2ekc_A AQ_1548, tryptophan syn 94.8 0.25 8.6E-06 43.0 11.0 81 87-167 28-129 (262)
434 3bw2_A 2-nitropropane dioxygen 94.8 0.4 1.4E-05 43.7 12.8 96 59-168 45-174 (369)
435 1hg3_A Triosephosphate isomera 94.8 0.12 4.1E-06 44.2 8.6 42 137-179 176-217 (225)
436 1vhc_A Putative KHG/KDPG aldol 94.8 0.41 1.4E-05 40.7 12.0 89 78-180 18-106 (224)
437 1qop_A Tryptophan synthase alp 94.7 0.31 1E-05 42.5 11.3 84 87-171 28-133 (268)
438 1eix_A Orotidine 5'-monophosph 94.7 0.73 2.5E-05 39.6 13.5 46 129-175 173-229 (245)
439 1sfl_A 3-dehydroquinate dehydr 94.6 1.5 5.1E-05 37.5 15.4 136 11-167 6-162 (238)
440 2h9a_B CO dehydrogenase/acetyl 94.5 0.33 1.1E-05 43.4 11.3 94 28-144 82-180 (310)
441 1wbh_A KHG/KDPG aldolase; lyas 94.5 0.22 7.4E-06 42.1 9.6 88 77-178 16-103 (214)
442 1w6t_A Enolase; bacterial infe 94.5 0.18 6.2E-06 47.4 10.0 70 87-166 279-352 (444)
443 1twd_A Copper homeostasis prot 94.5 0.37 1.3E-05 41.8 11.1 132 13-166 4-147 (256)
444 3vav_A 3-methyl-2-oxobutanoate 94.5 0.48 1.6E-05 41.6 11.9 105 9-145 91-216 (275)
445 2c6q_A GMP reductase 2; TIM ba 94.5 0.1 3.5E-06 47.6 7.9 67 93-167 120-189 (351)
446 3cpr_A Dihydrodipicolinate syn 94.4 0.14 4.8E-06 45.7 8.6 87 88-175 35-126 (304)
447 3tfx_A Orotidine 5'-phosphate 94.4 1.9 6.4E-05 37.5 15.6 68 92-175 146-224 (259)
448 3l0g_A Nicotinate-nucleotide p 94.4 0.15 5E-06 45.4 8.5 90 65-175 195-287 (300)
449 3tr9_A Dihydropteroate synthas 94.4 0.11 3.7E-06 46.6 7.7 83 18-107 46-129 (314)
450 3g8r_A Probable spore coat pol 94.3 0.68 2.3E-05 42.1 13.0 98 54-162 118-220 (350)
451 4h3d_A 3-dehydroquinate dehydr 94.3 2.4 8.1E-05 36.7 17.6 93 7-110 17-120 (258)
452 1wa3_A 2-keto-3-deoxy-6-phosph 94.3 0.13 4.4E-06 42.7 7.7 82 77-170 10-92 (205)
453 2z6i_A Trans-2-enoyl-ACP reduc 94.3 0.31 1.1E-05 43.8 10.8 92 60-168 47-139 (332)
454 1xg4_A Probable methylisocitra 94.3 0.56 1.9E-05 41.7 12.1 159 15-181 22-199 (295)
455 1xky_A Dihydrodipicolinate syn 94.3 0.13 4.4E-06 45.8 8.0 87 88-175 31-122 (301)
456 3flu_A DHDPS, dihydrodipicolin 94.2 0.13 4.5E-06 45.7 8.0 87 88-175 26-117 (297)
457 3eoo_A Methylisocitrate lyase; 94.2 0.63 2.1E-05 41.4 12.3 158 15-181 27-203 (298)
458 3l21_A DHDPS, dihydrodipicolin 94.2 0.13 4.4E-06 46.0 7.8 87 88-175 34-125 (304)
459 3daq_A DHDPS, dihydrodipicolin 94.2 0.12 4.2E-06 45.7 7.7 87 88-175 21-112 (292)
460 2e6f_A Dihydroorotate dehydrog 94.2 0.34 1.2E-05 43.0 10.7 91 75-167 92-195 (314)
461 3qze_A DHDPS, dihydrodipicolin 94.1 0.12 4E-06 46.4 7.5 87 88-175 42-133 (314)
462 4af0_A Inosine-5'-monophosphat 94.1 0.13 4.4E-06 49.4 8.0 72 90-169 280-352 (556)
463 3tak_A DHDPS, dihydrodipicolin 94.1 0.13 4.5E-06 45.5 7.6 87 88-175 20-111 (291)
464 1geq_A Tryptophan synthase alp 94.1 0.15 5.3E-06 43.5 7.9 86 88-175 17-123 (248)
465 1w0m_A TIM, triosephosphate is 94.1 0.19 6.6E-06 42.9 8.4 41 137-178 173-213 (226)
466 2ojp_A DHDPS, dihydrodipicolin 94.1 0.14 4.6E-06 45.5 7.7 87 88-175 20-111 (292)
467 3b4u_A Dihydrodipicolinate syn 94.1 0.15 5E-06 45.3 7.9 87 88-175 22-114 (294)
468 2wkj_A N-acetylneuraminate lya 94.0 0.14 4.9E-06 45.6 7.8 87 88-175 30-121 (303)
469 2fli_A Ribulose-phosphate 3-ep 94.0 0.24 8.4E-06 41.3 8.9 83 88-174 14-98 (220)
470 2qiw_A PEP phosphonomutase; st 94.0 0.24 8.4E-06 43.0 9.0 148 27-181 33-200 (255)
471 1q7z_A 5-methyltetrahydrofolat 94.0 0.31 1.1E-05 47.3 10.7 94 21-143 340-437 (566)
472 3a5f_A Dihydrodipicolinate syn 94.0 0.14 4.9E-06 45.2 7.7 88 87-175 19-111 (291)
473 1f6k_A N-acetylneuraminate lya 93.9 0.14 4.9E-06 45.3 7.6 87 88-175 22-114 (293)
474 2yxg_A DHDPS, dihydrodipicolin 93.9 0.15 5.3E-06 45.0 7.7 88 87-175 18-110 (289)
475 2nv1_A Pyridoxal biosynthesis 93.9 0.19 6.4E-06 44.7 8.4 83 91-175 29-114 (305)
476 2ehh_A DHDPS, dihydrodipicolin 93.9 0.15 5E-06 45.3 7.6 87 88-175 19-110 (294)
477 1o5k_A DHDPS, dihydrodipicolin 93.8 0.16 5.3E-06 45.4 7.6 88 87-175 30-122 (306)
478 3si9_A DHDPS, dihydrodipicolin 93.8 0.12 4.1E-06 46.4 6.9 87 88-175 41-132 (315)
479 1aj0_A DHPS, dihydropteroate s 93.8 0.15 5.1E-06 45.1 7.3 62 19-84 36-98 (282)
480 3ve9_A Orotidine-5'-phosphate 93.7 0.15 5.2E-06 43.2 7.0 135 8-177 50-190 (215)
481 2v9d_A YAGE; dihydrodipicolini 93.7 0.16 5.4E-06 46.2 7.6 87 88-175 50-141 (343)
482 2r8w_A AGR_C_1641P; APC7498, d 93.6 0.15 5.1E-06 46.1 7.2 87 88-175 53-144 (332)
483 2bdq_A Copper homeostasis prot 93.6 0.24 8.3E-06 42.1 8.0 120 31-166 19-152 (224)
484 3m5v_A DHDPS, dihydrodipicolin 93.5 0.16 5.6E-06 45.1 7.2 87 88-175 26-118 (301)
485 3gk0_A PNP synthase, pyridoxin 93.5 0.36 1.2E-05 42.1 9.0 115 52-174 132-250 (278)
486 2rfg_A Dihydrodipicolinate syn 93.5 0.14 4.8E-06 45.5 6.7 87 88-175 19-110 (297)
487 1mxs_A KDPG aldolase; 2-keto-3 93.5 0.54 1.8E-05 40.0 10.2 98 64-178 16-113 (225)
488 1s2w_A Phosphoenolpyruvate pho 93.4 0.79 2.7E-05 40.7 11.5 158 15-181 24-203 (295)
489 4dpp_A DHDPS 2, dihydrodipicol 93.4 0.78 2.7E-05 41.9 11.7 81 19-110 78-161 (360)
490 3na8_A Putative dihydrodipicol 93.4 0.13 4.6E-06 46.1 6.5 87 88-175 43-134 (315)
491 4hb7_A Dihydropteroate synthas 93.3 0.47 1.6E-05 41.5 9.6 78 19-111 28-110 (270)
492 2pa6_A Enolase; glycolysis, ly 93.3 0.33 1.1E-05 45.2 9.3 70 87-166 267-338 (427)
493 1rd5_A Tryptophan synthase alp 93.2 0.46 1.6E-05 41.1 9.5 101 65-167 6-125 (262)
494 2pcq_A Putative dihydrodipicol 93.2 0.87 3E-05 40.0 11.4 121 19-157 17-144 (283)
495 3usb_A Inosine-5'-monophosphat 93.1 0.6 2E-05 44.6 10.9 71 90-168 255-326 (511)
496 3s5o_A 4-hydroxy-2-oxoglutarat 93.1 0.23 8E-06 44.3 7.5 85 88-173 33-122 (307)
497 2vc6_A MOSA, dihydrodipicolina 93.1 0.15 5.1E-06 45.2 6.2 87 88-175 19-110 (292)
498 2bdq_A Copper homeostasis prot 93.1 1.6 5.3E-05 37.1 12.1 130 17-166 69-206 (224)
499 4dpp_A DHDPS 2, dihydrodipicol 93.0 0.26 8.9E-06 45.1 7.9 87 88-175 78-169 (360)
500 2fiq_A Putative tagatose 6-pho 93.0 3.9 0.00013 38.0 15.9 97 11-113 15-127 (420)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=3.1e-46 Score=346.56 Aligned_cols=252 Identities=22% Similarity=0.332 Sum_probs=214.6
Q ss_pred CCCCCCCEEEEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE
Q 023070 4 LPPEDRPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK 82 (287)
Q Consensus 4 ~~~~~~p~~~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK 82 (287)
+++.+.|+++||+|++|++|++||+.++ .|||+||||+|||.+++++++||++|+++++++.++++++++.+++||++|
T Consensus 53 ~~~~~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vK 132 (350)
T 3b0p_A 53 FRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVK 132 (350)
T ss_dssp CCGGGCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCCCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEE
Confidence 5677899999999999999999999764 589999999999999999999999999999999999999999899999999
Q ss_pred ecCCCCh----hhHHHHHHHHHHcCCCEEEEeccCCCCcCCC-----CccccHHHHHHHHhhC-CCcEEEecCCCCHHHH
Q 023070 83 IRVFPNL----QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGK-----KFRADWNAIKAVKNAL-RIPVLANGNVRHMEDV 152 (287)
Q Consensus 83 iR~g~~~----~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~-----~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da 152 (287)
+|+|++. +++.++++.++++|+++|+||+|+..+.... ..+.+|+.++++++.+ ++|||+||||+|++|+
T Consensus 133 iR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda 212 (350)
T 3b0p_A 133 MRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEA 212 (350)
T ss_dssp EESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHH
T ss_pred EecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHH
Confidence 9998753 3678999999999999999999987532111 1146899999999998 8999999999999999
Q ss_pred HHHHHhcCccEEEEehhhhhCccchhchhhhhhccCCccccCCCchhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhh
Q 023070 153 QKCLEETGCEGVLSAESLLENPALFAGFRTAEWIVGSEEISKDGNLDQADLLVEYLKLCEKYPVPWRMIRSHVHKLLGEW 232 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~nP~lf~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~ 232 (287)
.++++ |||+||+||+++.|||+|.++....| + ..+.++..+..+.+.+|++....++..+..+|+|+.||+++
T Consensus 213 ~~~l~--GaD~V~iGRa~l~~P~l~~~i~~~l~---~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~kh~~~~~~g- 285 (350)
T 3b0p_A 213 LFHLK--RVDGVMLGRAVYEDPFVLEEADRRVF---G-LPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRG- 285 (350)
T ss_dssp HHHHT--TSSEEEECHHHHHCGGGGTTHHHHTT---C-CSCCCCHHHHHHHHHHHHHHHHHHTCCHHHHHTTSTTTTTT-
T ss_pred HHHHh--CCCEEEECHHHHhCcHHHHHHHHHhc---C-CCCCCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHcc-
Confidence 99997 79999999999999999999986544 2 23345566677777788775545666789999999987775
Q ss_pred hcCChHHHHHHHhcchhcHHHHHHHHHHHHHh
Q 023070 233 FRIQPGVREDLNAQNRLTFEFLYNLVDRLREL 264 (287)
Q Consensus 233 ~~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~ 264 (287)
+++...+|+.|++.. +.+++.++++++...
T Consensus 286 ~~~~~~~r~~l~~~~--~~~~~~~~l~~~~~~ 315 (350)
T 3b0p_A 286 RPKGRLWRRLLSEGR--SLQALDRALRLMEEE 315 (350)
T ss_dssp STTHHHHHHHHHHHC--SHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCC--CHHHHHHHHHHHhhh
Confidence 567778999999886 889999999887543
No 2
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=6.9e-46 Score=340.24 Aligned_cols=250 Identities=22% Similarity=0.363 Sum_probs=217.4
Q ss_pred CCCCCCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 023070 4 LPPEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI 83 (287)
Q Consensus 4 ~~~~~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKi 83 (287)
.++.+.|+++||+|++|++|++||+.+++.||+||||+|||.+++++++||++|+++++++.++++++++.+++||++|+
T Consensus 54 ~~~~~~~~~~QL~g~~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKi 133 (318)
T 1vhn_A 54 PQPHERNVAVQIFGSEPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKT 133 (318)
T ss_dssp CCTTCTTEEEEEECSCHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred hCcCCCeEEEEeCCCCHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEe
Confidence 46778999999999999999999997754499999999999999999999999999999999999999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
|.|++..+..++++.++++|+++|+||+|+..+. +.++++|+.++++++ ++|||+||||+|++|+.++++.+|||+
T Consensus 134 r~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~--~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~ 209 (318)
T 1vhn_A 134 RLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQS--FTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDG 209 (318)
T ss_dssp ESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTT--TSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSE
T ss_pred cCCCChHHHHHHHHHHHHhCCCEEEEcCCCcccc--CCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCE
Confidence 9999877778999999999999999999988653 334688998888887 999999999999999999999789999
Q ss_pred EEEehhhhhCccchhchhhhhhccCCccccCCCchhHHHHHHHHHHHHHh-CCC--chHHHHHHHHHHHHhhhcCChHHH
Q 023070 164 VLSAESLLENPALFAGFRTAEWIVGSEEISKDGNLDQADLLVEYLKLCEK-YPV--PWRMIRSHVHKLLGEWFRIQPGVR 240 (287)
Q Consensus 164 VmiGR~~l~nP~lf~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~--~~~~~r~~~~~~~~~~~~~~~~~r 240 (287)
||+||+++.|||+|.++... +.+| ..+.++..+..+++.+|+++..+ ++. .+..+|+|+.||++. +++...+|
T Consensus 210 V~iGR~~l~~P~l~~~~~~~--~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~r 285 (318)
T 1vhn_A 210 LLVARGAIGRPWIFKQIKDF--LRSG-KYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYTKD-LKGARRFR 285 (318)
T ss_dssp EEESGGGTTCTTHHHHHHHH--HHHS-CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHTTT-CTTHHHHH
T ss_pred EEECHHHHhCcchHHHHHHH--HhCC-CCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhc-CCChHHHH
Confidence 99999999999999988642 2224 33345677889999999988654 443 478899999998775 56777899
Q ss_pred HHHHhcchhcHHHHHHHHHHHHH
Q 023070 241 EDLNAQNRLTFEFLYNLVDRLRE 263 (287)
Q Consensus 241 ~~l~~~~~~~~~~~~~~~~~~~~ 263 (287)
+.+++.. +.+++.++++++.+
T Consensus 286 ~~~~~~~--~~~~~~~~~~~~~~ 306 (318)
T 1vhn_A 286 EKVMKIE--EVQILKEMFYNFIK 306 (318)
T ss_dssp HHHTTCC--CHHHHHHHHHHHHH
T ss_pred HHHHcCC--CHHHHHHHHHHHHH
Confidence 9999886 88999999988643
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.97 E-value=7.5e-31 Score=242.23 Aligned_cols=162 Identities=14% Similarity=0.204 Sum_probs=144.2
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC-----
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV----- 85 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~----- 85 (287)
++|++||+.+ ++|||+||||++| |..|.|+++||++++++++++.+++++|++++++||++|++.
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 7899999865 5799999999886 999999999999999999999999999999999999999998
Q ss_pred -CCChhhHHHHHHHHHHcCCCEEEEeccCCCCc-CCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 86 -FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEK-DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 86 -g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~-~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
|++.+++.++++.+++.|+++|+||+++.... .......+++.++++++.+++||+++|||+|++++.++++.++||+
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~ 303 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADL 303 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceE
Confidence 57788899999999999999999999875421 1111124789999999999999999999999999999999766999
Q ss_pred EEEehhhhhCccchhchhh
Q 023070 164 VLSAESLLENPALFAGFRT 182 (287)
Q Consensus 164 VmiGR~~l~nP~lf~~~~~ 182 (287)
|++||+++.||+|+.++..
T Consensus 304 V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 304 IFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp EEECHHHHHCTTHHHHHHH
T ss_pred EeecHHHHhCchHHHHHHc
Confidence 9999999999999998875
No 4
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.97 E-value=9.3e-30 Score=236.71 Aligned_cols=167 Identities=21% Similarity=0.270 Sum_probs=144.9
Q ss_pred CCCEEEEecCC-----CHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc-------c
Q 023070 8 DRPLFVQFCAN-----DPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-------L 75 (287)
Q Consensus 8 ~~p~~~Qi~g~-----~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~-------~ 75 (287)
+.|+++||+|| ++++|+++++.+..++|+||||++||+.. |..++++++.+.++++++++. .
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~------G~~~l~~~~~l~~ll~av~~~~~~~~~~~ 219 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTA------GLRSLQGKAELRRLLTKVLQERDGLRRVH 219 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHTSCGGG
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCC------CccccCCHHHHHHHHHHHHHHHhhccccC
Confidence 57999999997 89999999999988899999999999963 345789999999999999754 6
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCC-----------cCCCCccc----cHHHHHHHHhhC--CC
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE-----------KDGKKFRA----DWNAIKAVKNAL--RI 138 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~-----------~~~~~~~~----~~~~i~~i~~~~--~i 138 (287)
++||+||++.+++.++..++|+.++++|+|+|++|+++... ..+.+|++ .|+.++++++.+ ++
T Consensus 220 ~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~i 299 (367)
T 3zwt_A 220 RPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRV 299 (367)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCS
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCc
Confidence 89999999999988899999999999999999999887432 11223333 468899999998 89
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhh-hhCccchhchh
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESL-LENPALFAGFR 181 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~-l~nP~lf~~~~ 181 (287)
|||++|||+|++|+.+++. .|||+||+||++ +.+||++.++.
T Consensus 300 pvI~~GGI~s~~da~~~l~-~GAd~V~vgra~l~~gP~~~~~i~ 342 (367)
T 3zwt_A 300 PIIGVGGVSSGQDALEKIR-AGASLVQLYTALTFWGPPVVGKVK 342 (367)
T ss_dssp CEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCTHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHhcCcHHHHHHH
Confidence 9999999999999999998 699999999999 57899998775
No 5
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.97 E-value=7.9e-30 Score=235.36 Aligned_cols=163 Identities=18% Similarity=0.221 Sum_probs=143.0
Q ss_pred HHHHHHHHHHH-cCCCCEEEEecc---------CChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC----
Q 023070 20 PEILLNAARRV-EPYCDYVDINLG---------CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV---- 85 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN~g---------cP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~---- 85 (287)
.++|++||+.+ ++|||+||||++ ||..|.|+|.||+++++|++++.+++++|++.+++||+||++.
T Consensus 143 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~ 222 (340)
T 3gr7_A 143 VQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYH 222 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 47899999966 469999999988 5999999999999999999999999999999999999999997
Q ss_pred --CCChhhHHHHHHHHHHcCCCEEEEecc-CCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 86 --FPNLQDTIKYAKMLEDAGCSLLAVHGR-TRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 86 --g~~~~~~~~~a~~l~~~G~~~I~vh~r-t~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
|++.+++.++++.++++|+|+|+||.+ +..+........+++.++++++.+++||+++|||+|+++++++++.++||
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRAD 302 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCee
Confidence 356789999999999999999999954 33221111123578999999999999999999999999999999976699
Q ss_pred EEEEehhhhhCccchhchhh
Q 023070 163 GVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 163 ~VmiGR~~l~nP~lf~~~~~ 182 (287)
+|++||+++.||+|+.++..
T Consensus 303 ~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 303 LVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp EEEECHHHHHCTTHHHHHHH
T ss_pred EEEecHHHHhCchHHHHHHH
Confidence 99999999999999998875
No 6
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.97 E-value=2.2e-30 Score=239.50 Aligned_cols=169 Identities=15% Similarity=0.188 Sum_probs=145.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHc----CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE
Q 023070 7 EDRPLFVQFCANDPEILLNAARRVE----PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK 82 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~~~----~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK 82 (287)
.+.|+++||+|+++++|.++|+.++ .|+|+||||++||+.. + |..|+.+|+.+.++++++++.+++||+||
T Consensus 125 ~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~---g--g~~l~~~~e~~~~il~av~~~~~~PV~vK 199 (354)
T 4ef8_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP---G--KPQVAYDFDAMRQCLTAVSEVYPHSFGVK 199 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST---T--SCCGGGSHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC---C--chhhccCHHHHHHHHHHHHHhhCCCeEEE
Confidence 3689999999999999999999776 3799999999999963 2 67888999999999999999999999999
Q ss_pred ecCCCChhhHHHHHHHHHHcC-CCEEEEeccC------------CC-----CcCCCCc----cccHHHHHHHHhhC-CCc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAG-CSLLAVHGRT------------RD-----EKDGKKF----RADWNAIKAVKNAL-RIP 139 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G-~~~I~vh~rt------------~~-----~~~~~~~----~~~~~~i~~i~~~~-~ip 139 (287)
+|.+++..+..++++.++++| +++|+++..+ .. ...+++| +.+|+.++++++.. ++|
T Consensus 200 i~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ip 279 (354)
T 4ef8_A 200 MPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKL 279 (354)
T ss_dssp ECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCC
Confidence 999998778888899999998 9999875432 11 1112233 35799999999986 799
Q ss_pred EEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC-ccchhchh
Q 023070 140 VLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN-PALFAGFR 181 (287)
Q Consensus 140 Vi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n-P~lf~~~~ 181 (287)
||++|||+|++|+.+++. .|||+||+||+++.| ||+|.++.
T Consensus 280 II~~GGI~s~~da~~~l~-aGAd~V~vgra~l~~GP~~~~~i~ 321 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHVL-AGASMVQVGTALQEEGPSIFERLT 321 (354)
T ss_dssp EEEESCCCSHHHHHHHHH-HTEEEEEECHHHHHHCTTHHHHHH
T ss_pred EEEECCcCCHHHHHHHHH-cCCCEEEEhHHHHHhCHHHHHHHH
Confidence 999999999999999998 699999999999998 99998774
No 7
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.96 E-value=2.1e-29 Score=235.37 Aligned_cols=158 Identities=18% Similarity=0.189 Sum_probs=137.6
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCC---
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVF--- 86 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g--- 86 (287)
++|++||+.+ ++|||+||||++| |..|.|+++||++++++++++.+|+++|+++++ .||++|++..
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~ 245 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 7999999865 5699999999886 999999999999999999999999999999885 3999999874
Q ss_pred ------CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcC
Q 023070 87 ------PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETG 160 (287)
Q Consensus 87 ------~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~g 160 (287)
++.+++.++++.++++|+++|+||+++..+.. ++ .+|+.++++++.+++|||++||| +++++.++++.++
T Consensus 246 ~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~--~~-~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~ 321 (377)
T 2r14_A 246 FGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGD--IT-YPEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNT 321 (377)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------C-CCTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCC--Cc-chHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCC
Confidence 23467889999999999999999998754321 11 36888999999999999999999 6999999999877
Q ss_pred ccEEEEehhhhhCccchhchhh
Q 023070 161 CEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 161 ad~VmiGR~~l~nP~lf~~~~~ 182 (287)
||+||+||+++.||||+.+++.
T Consensus 322 aD~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 322 ADAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp CSEEEESHHHHHCTTHHHHHHH
T ss_pred ceEEeecHHHHhCchHHHHHHc
Confidence 9999999999999999998875
No 8
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.96 E-value=2.4e-29 Score=232.13 Aligned_cols=161 Identities=19% Similarity=0.234 Sum_probs=142.1
Q ss_pred HHHHHHHHHHH-cCCCCEEEEe---------ccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC--
Q 023070 20 PEILLNAARRV-EPYCDYVDIN---------LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV-- 85 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN---------~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~-- 85 (287)
.++|++||+.+ ++|||+|||| |+||..|.|+|.||+++++|++++.+++++|++++ ++||++|++.
T Consensus 142 i~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~ 221 (343)
T 3kru_A 142 VKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD 221 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred HHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh
Confidence 47899999865 5699999999 88999999999999999999999999999999998 6899999997
Q ss_pred ----CCChhhHHHHHHHHHHcCCCEEEE-eccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcC
Q 023070 86 ----FPNLQDTIKYAKMLEDAGCSLLAV-HGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETG 160 (287)
Q Consensus 86 ----g~~~~~~~~~a~~l~~~G~~~I~v-h~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~g 160 (287)
|++.+++.++++.++++ +|+|+| +|++..+........+|+.++++++.+++||+++|||+|+++++++++.++
T Consensus 222 ~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~ 300 (343)
T 3kru_A 222 YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNER 300 (343)
T ss_dssp SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTS
T ss_pred hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchh
Confidence 35678899999999999 999999 576654221111135789999999999999999999999999999999877
Q ss_pred ccEEEEehhhhhCccchhchh
Q 023070 161 CEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 161 ad~VmiGR~~l~nP~lf~~~~ 181 (287)
||+||+||+++.||+|+.+++
T Consensus 301 aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 301 ADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp CSEEEESHHHHHCTTHHHHTC
T ss_pred hHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999886
No 9
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.96 E-value=4.3e-29 Score=234.99 Aligned_cols=161 Identities=14% Similarity=0.139 Sum_probs=140.3
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCCC--
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP-- 87 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g~-- 87 (287)
++|++||+.+ ++|||+||||++| |..|.|+|.||+++++|++++.+|+++|+++++ .||++|++.+.
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~ 250 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDH 250 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecccccc
Confidence 8999999965 6799999999886 999999999999999999999999999999885 59999999752
Q ss_pred -------ChhhHHHHHHHHHHcC------CCEEEEeccCCCCcCCCC------ccccHHHHHHHHhhCCCcEEEecCCCC
Q 023070 88 -------NLQDTIKYAKMLEDAG------CSLLAVHGRTRDEKDGKK------FRADWNAIKAVKNALRIPVLANGNVRH 148 (287)
Q Consensus 88 -------~~~~~~~~a~~l~~~G------~~~I~vh~rt~~~~~~~~------~~~~~~~i~~i~~~~~ipVi~nGgI~s 148 (287)
+.+++.++++.+++.| +++|+||+++..+....+ +..+|+.++.+++.+++|||++||| |
T Consensus 251 ~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~ 329 (402)
T 2hsa_B 251 LDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-T 329 (402)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-C
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-C
Confidence 2356789999999999 999999998765411111 1136888999999999999999999 9
Q ss_pred HHHHHHHHHhcCccEEEEehhhhhCccchhchhh
Q 023070 149 MEDVQKCLEETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 149 ~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
++++.++++.++||+||+||+++.||||+.+++.
T Consensus 330 ~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 330 RELGIEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred HHHHHHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 9999999998789999999999999999998875
No 10
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.96 E-value=1.2e-28 Score=227.28 Aligned_cols=166 Identities=16% Similarity=0.235 Sum_probs=136.7
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHc-CCCC-EEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 023070 7 EDRPLFVQFCANDPEILLNAARRVE-PYCD-YVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 84 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~~~-~g~d-~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR 84 (287)
.+.|+++||+|+++++|.++|+.++ .+++ +||||++||+.. + |.+|+++|+.+.++++++++.+++||+||+|
T Consensus 127 ~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~---G--~~~l~~~~e~l~~il~av~~~~~~PV~vKi~ 201 (345)
T 3oix_A 127 DSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP---G--XPQIAYDFETTDQILSEVFTYFTKPLGIKLP 201 (345)
T ss_dssp TCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST---T--CCCGGGCHHHHHHHHHHHTTTCCSCEEEEEC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC---C--chhhcCCHHHHHHHHHHHHHHhCCCeEEEEC
Confidence 4789999999999999999999886 4665 999999999964 2 5788899999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEE-------------EeccCCCC-----cCCCCcccc----HHHHHHHHhhC--CCcE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLA-------------VHGRTRDE-----KDGKKFRAD----WNAIKAVKNAL--RIPV 140 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~-------------vh~rt~~~-----~~~~~~~~~----~~~i~~i~~~~--~ipV 140 (287)
.+.+ ..++++.++++|++.|+ +|.|+... ..+++|++. |+.++++++.+ ++||
T Consensus 202 p~~~---~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipI 278 (345)
T 3oix_A 202 PYFD---IVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQI 278 (345)
T ss_dssp CCCC---HHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEE
T ss_pred CCCC---HHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcE
Confidence 8754 45666666676665553 44443221 122344444 78899999998 7999
Q ss_pred EEecCCCCHHHHHHHHHhcCccEEEEehh-hhhCccchhchh
Q 023070 141 LANGNVRHMEDVQKCLEETGCEGVLSAES-LLENPALFAGFR 181 (287)
Q Consensus 141 i~nGgI~s~~da~~~l~~~gad~VmiGR~-~l~nP~lf~~~~ 181 (287)
|++|||+|++|+.+++. .|||+||+||+ ++.+||+|.++.
T Consensus 279 Ig~GGI~s~~da~~~l~-aGAd~V~igra~~~~gP~~~~~i~ 319 (345)
T 3oix_A 279 IGTGGVXTGRDAFEHIL-CGASMVQIGTALHQEGPQIFKRIT 319 (345)
T ss_dssp EEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCTHHHHHHH
T ss_pred EEECCCCChHHHHHHHH-hCCCEEEEChHHHhcChHHHHHHH
Confidence 99999999999999998 69999999999 899999998774
No 11
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.96 E-value=5.3e-29 Score=232.67 Aligned_cols=159 Identities=19% Similarity=0.167 Sum_probs=137.0
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCCC--
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP-- 87 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g~-- 87 (287)
++|++||+.+ ++|||+||||++| |..|.|++.||++++++++++.+++++|+++++ .||++|++...
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~ 246 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 7999999865 6799999999886 999999999999999999999999999999985 39999999642
Q ss_pred -------ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcC
Q 023070 88 -------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETG 160 (287)
Q Consensus 88 -------~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~g 160 (287)
+.+++.++++.++++|+++|++|+++..+. .+...+|+.++.+++.+++||+++||| +++++.++++.++
T Consensus 247 ~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~--~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~~~l~~g~ 323 (376)
T 1icp_A 247 NEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA--WEKIECTESLVPMRKAYKGTFIVAGGY-DREDGNRALIEDR 323 (376)
T ss_dssp TTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC--------CCCCSHHHHHHCCSCEEEESSC-CHHHHHHHHHTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC--CCccccHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHCCC
Confidence 234578999999999999999999875432 112245677889999999999999999 8999999999878
Q ss_pred ccEEEEehhhhhCccchhchhh
Q 023070 161 CEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 161 ad~VmiGR~~l~nP~lf~~~~~ 182 (287)
||+||+||+++.||||+.+++.
T Consensus 324 aD~V~~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 324 ADLVAYGRLFISNPDLPKRFEL 345 (376)
T ss_dssp CSEEEESHHHHHCTTHHHHHHH
T ss_pred CcEEeecHHHHhCccHHHHHHc
Confidence 9999999999999999998874
No 12
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.96 E-value=1.9e-28 Score=228.09 Aligned_cols=157 Identities=15% Similarity=0.202 Sum_probs=138.7
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCCC--
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP-- 87 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g~-- 87 (287)
++|++||+.+ ++|||+||||++| |..|.|+++||++++++++++.+++++|++.++ .||++|++.+.
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 7999999865 6799999999886 999999999999999999999999999999984 39999999862
Q ss_pred --------ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 88 --------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 88 --------~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
+.+++.++++.+++.|+++|++|+++..+. . ..+|+.++++++.+++||+++||| |++++.++++.+
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~--~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g 315 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG--K--PYSEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKG 315 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--C--CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTT
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC--C--cccHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCC
Confidence 233578899999999999999998865432 1 246888999999999999999999 899999999987
Q ss_pred CccEEEEehhhhhCccchhchhh
Q 023070 160 GCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+||+||+||+++.||||+.+++.
T Consensus 316 ~aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 316 LIDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHH
T ss_pred CccEEEECHHHHhChhHHHHHHc
Confidence 79999999999999999998874
No 13
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.96 E-value=2e-28 Score=226.85 Aligned_cols=163 Identities=18% Similarity=0.231 Sum_probs=143.3
Q ss_pred HHHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC--
Q 023070 20 PEILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV-- 85 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~-- 85 (287)
.++|++||+.+ ++|||+||||++| |..|.|+|+||+++++|++++.+++++|++.+ ++||++|++.
T Consensus 151 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~ 230 (349)
T 3hgj_A 151 LQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc
Confidence 47899999865 5799999999999 99999999999999999999999999999998 7999999997
Q ss_pred ----CCChhhHHHHHHHHHHcCCCEEEEe-ccCCCCcCC-CCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 86 ----FPNLQDTIKYAKMLEDAGCSLLAVH-GRTRDEKDG-KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 86 ----g~~~~~~~~~a~~l~~~G~~~I~vh-~rt~~~~~~-~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
|++.+++.++++.+++.|+++|+|| |++...... .....+++.++++++.+++||+++|||+|++++.++++.+
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAG 310 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTT
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCC
Confidence 5788899999999999999999999 444322111 1113578999999999999999999999999999999976
Q ss_pred CccEEEEehhhhhCccchhchhh
Q 023070 160 GCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
.||+|++||+++.||+|+.++..
T Consensus 311 ~aD~V~iGR~~lanPdl~~k~~~ 333 (349)
T 3hgj_A 311 SADLVLLGRVLLRDPYFPLRAAK 333 (349)
T ss_dssp SCSEEEESTHHHHCTTHHHHHHH
T ss_pred CceEEEecHHHHhCchHHHHHHH
Confidence 69999999999999999998864
No 14
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.96 E-value=2.9e-28 Score=226.91 Aligned_cols=157 Identities=15% Similarity=0.204 Sum_probs=138.6
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccCC-cEEEEecCC-C-
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVF-P- 87 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~-pv~vKiR~g-~- 87 (287)
++|++||+.+ ++|||+||||++| |..|.|+++||+++++|++++.+++++|++.++. ||++|++.. +
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~ 240 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcccccc
Confidence 8999999865 6799999999886 9999999999999999999999999999998843 999999983 2
Q ss_pred -------ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcC
Q 023070 88 -------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETG 160 (287)
Q Consensus 88 -------~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~g 160 (287)
+.+++.++++.+++.|+++|++|+++..... ...|+.++.+++.+++|||++||| |++++.++++.++
T Consensus 241 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~----~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~ 315 (365)
T 2gou_A 241 NGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAP----DTPVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGL 315 (365)
T ss_dssp TSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC----CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCC----CccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCC
Confidence 3457789999999999999999998653211 135788999999999999999999 9999999999867
Q ss_pred ccEEEEehhhhhCccchhchhh
Q 023070 161 CEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 161 ad~VmiGR~~l~nP~lf~~~~~ 182 (287)
||+||+||+++.||||+.+++.
T Consensus 316 aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 316 ADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp CSEEECCHHHHHCTTHHHHHHH
T ss_pred cceehhcHHHHhCchHHHHHHc
Confidence 9999999999999999998874
No 15
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.96 E-value=2.8e-28 Score=222.36 Aligned_cols=168 Identities=16% Similarity=0.256 Sum_probs=144.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHc-CCCC-EEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVE-PYCD-YVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 85 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~-~g~d-~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~ 85 (287)
+.|+++||+|+++++|.++++.++ .|+| +|+||++||+. + .|..+..+++.+.++++++++.+++||++|++.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~---~--g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~ 167 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV---P--GEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPP 167 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS---S--SCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC---C--CcccccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 789999999999999999999765 5899 99999999996 1 156666799999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCC-----C---C---------cCCCCcc----ccHHHHHHHHhhC--CCcEEE
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTR-----D---E---------KDGKKFR----ADWNAIKAVKNAL--RIPVLA 142 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~-----~---~---------~~~~~~~----~~~~~i~~i~~~~--~ipVi~ 142 (287)
+++.++..++++.++++|+|+|++|+++. + . ..+.+++ ..|+.++++++.+ ++|||+
T Consensus 168 ~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~ 247 (311)
T 1jub_A 168 YFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIG 247 (311)
T ss_dssp CCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEE
Confidence 88877888999999999999999998751 1 0 0011122 3488999999998 899999
Q ss_pred ecCCCCHHHHHHHHHhcCccEEEEehhhhh-Cccchhchh
Q 023070 143 NGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFR 181 (287)
Q Consensus 143 nGgI~s~~da~~~l~~~gad~VmiGR~~l~-nP~lf~~~~ 181 (287)
+|||+|++|+.+++. .|||+||+||+++. +||++.++.
T Consensus 248 ~GGI~~~~da~~~l~-~GAd~V~vg~~~l~~~p~~~~~i~ 286 (311)
T 1jub_A 248 TGGIETGQDAFEHLL-CGATMLQIGTALHKEGPAIFDRII 286 (311)
T ss_dssp ESSCCSHHHHHHHHH-HTCSEEEECHHHHHHCTHHHHHHH
T ss_pred ECCCCCHHHHHHHHH-cCCCEEEEchHHHhcCcHHHHHHH
Confidence 999999999999997 59999999999996 999998775
No 16
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.96 E-value=3.9e-28 Score=223.74 Aligned_cols=167 Identities=19% Similarity=0.253 Sum_probs=143.7
Q ss_pred CCCEEEEecCCC-------HHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-----
Q 023070 8 DRPLFVQFCAND-------PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL----- 75 (287)
Q Consensus 8 ~~p~~~Qi~g~~-------~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~----- 75 (287)
+.|+++||++++ +++|.++++.+..|+|+|+||++||+.+ |...+++++++.+++++|++.+
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~ 206 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP------GLRTLQYGEALDDLLTAIKNKQNDLQA 206 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC------CcccccCHHHHHHHHHHHHHHHHhhhh
Confidence 469999999998 9999999998877999999999999864 2345678999999999999887
Q ss_pred ----CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCc-----------CCCCcc----ccHHHHHHHHhhC
Q 023070 76 ----NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEK-----------DGKKFR----ADWNAIKAVKNAL 136 (287)
Q Consensus 76 ----~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~-----------~~~~~~----~~~~~i~~i~~~~ 136 (287)
++||++|++.+++.++..++++.++++|+|+|+||+++.... .+.+++ ..++.++++++.+
T Consensus 207 ~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~ 286 (336)
T 1f76_A 207 MHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL 286 (336)
T ss_dssp HHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH
T ss_pred cccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh
Confidence 899999999988888899999999999999999998763211 011222 2457888999887
Q ss_pred --CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh-Cccchhchh
Q 023070 137 --RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFR 181 (287)
Q Consensus 137 --~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~-nP~lf~~~~ 181 (287)
++|||++|||+|++|+.+++. .|||+||+||+++. |||++.++.
T Consensus 287 ~~~ipVi~~GGI~~~~da~~~l~-~GAd~V~igr~~l~~~P~~~~~i~ 333 (336)
T 1f76_A 287 NGRLPIIGVGGIDSVIAAREKIA-AGASLVQIYSGFIFKGPPLIKEIV 333 (336)
T ss_dssp TTSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCHHHHHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHH-CCCCEEEeeHHHHhcCcHHHHHHH
Confidence 899999999999999999998 58999999999998 999999875
No 17
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.96 E-value=3.8e-28 Score=227.59 Aligned_cols=167 Identities=19% Similarity=0.170 Sum_probs=140.3
Q ss_pred CCCEEEEecCCC-----HHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc--------
Q 023070 8 DRPLFVQFCAND-----PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-------- 74 (287)
Q Consensus 8 ~~p~~~Qi~g~~-----~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~-------- 74 (287)
..|+++||++++ +++|.++++.+...+|+|+||++||++. |..++++++.+.++++++++.
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~ 254 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNN 254 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCC------CcccccCHHHHHHHHHHHHHHHHhhcccc
Confidence 457999999998 8999999999988899999999999963 677899999999999999875
Q ss_pred ------------cCCc-EEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCC---------cCCCCccccH----HH
Q 023070 75 ------------LNVP-VSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE---------KDGKKFRADW----NA 128 (287)
Q Consensus 75 ------------~~~p-v~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~---------~~~~~~~~~~----~~ 128 (287)
..+| |+||++.+++.++..++|+.++++|+|+|++|+++... ..+.+|++.| +.
T Consensus 255 ~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~ 334 (415)
T 3i65_A 255 IMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKF 334 (415)
T ss_dssp CSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHH
T ss_pred cccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHH
Confidence 2689 99999999988889999999999999999999988642 1223445554 78
Q ss_pred HHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC-ccchhchh
Q 023070 129 IKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN-PALFAGFR 181 (287)
Q Consensus 129 i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n-P~lf~~~~ 181 (287)
++++++.+ ++|||++|||+|++|+.+++. .|||+|||||+++.+ ||++.++.
T Consensus 335 I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~-aGAd~VqIgra~l~~GP~~~~~i~ 389 (415)
T 3i65_A 335 ICEMYNYTNKQIPIIASGGIFSGLDALEKIE-AGASVCQLYSCLVFNGMKSAVQIK 389 (415)
T ss_dssp HHHHHHHTTTCSCEEECSSCCSHHHHHHHHH-HTEEEEEESHHHHHHGGGHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHHhcCHHHHHHHH
Confidence 99999988 799999999999999999998 699999999999876 99998775
No 18
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.95 E-value=2.7e-28 Score=230.48 Aligned_cols=161 Identities=16% Similarity=0.173 Sum_probs=140.2
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccc-cCChHHHHHHHHHHhhcc------CCcEEEEe
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFL-MDNLPLVKSLVEKLALNL------NVPVSCKI 83 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l-~~~~~~~~~iv~~v~~~~------~~pv~vKi 83 (287)
++|++||+.+ ++|||+||||++| |..|.|+|.||+++ ++|++++.+|+++|++++ ++||++|+
T Consensus 170 ~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRi 249 (419)
T 3l5a_A 170 QQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRA 249 (419)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEec
Confidence 7899999865 6799999999887 99999999999999 999999999999999877 68999999
Q ss_pred cC--------CCChhhHHHHHHHHHH-cCCCEEEEeccCCCCc---CCCCcc-ccHHHHHHHHhhC--CCcEEEecCCCC
Q 023070 84 RV--------FPNLQDTIKYAKMLED-AGCSLLAVHGRTRDEK---DGKKFR-ADWNAIKAVKNAL--RIPVLANGNVRH 148 (287)
Q Consensus 84 R~--------g~~~~~~~~~a~~l~~-~G~~~I~vh~rt~~~~---~~~~~~-~~~~~i~~i~~~~--~ipVi~nGgI~s 148 (287)
+. |++.+++.++++.+++ +|+|+|+||+++.... ....++ .+++.++.+++.+ ++|||++|||+|
T Consensus 250 s~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t 329 (419)
T 3l5a_A 250 TPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINS 329 (419)
T ss_dssp CSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCS
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCC
Confidence 98 6678899999999999 9999999998875211 111122 3677888899887 699999999999
Q ss_pred HHHHHHHHHhcCccEEEEehhhhhCccchhchhhh
Q 023070 149 MEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 183 (287)
Q Consensus 149 ~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~~~~ 183 (287)
+++++++++. ||+|++||+++.||+|+.+++..
T Consensus 330 ~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ki~~G 362 (419)
T 3l5a_A 330 PESALDALQH--ADMVGMSSPFVTEPDFVHKLAEQ 362 (419)
T ss_dssp HHHHHHHGGG--CSEEEESTHHHHCTTHHHHHHTT
T ss_pred HHHHHHHHHh--CCcHHHHHHHHHCcHHHHHHHcC
Confidence 9999999996 99999999999999999988753
No 19
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.95 E-value=2.2e-27 Score=225.07 Aligned_cols=167 Identities=17% Similarity=0.168 Sum_probs=144.9
Q ss_pred CCCEEEEecCCC-----HHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc--------
Q 023070 8 DRPLFVQFCAND-----PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-------- 74 (287)
Q Consensus 8 ~~p~~~Qi~g~~-----~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~-------- 74 (287)
..|+++||+|++ +++|+++++.+..++|+||||++||+++ |...+++++.+.+|+++|++.
T Consensus 179 ~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~v~~~~~~~~~~~ 252 (443)
T 1tv5_A 179 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNN 252 (443)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHHHC---
T ss_pred CceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc------ccccccCHHHHHHHHHHHHHHHhhhcccC
Confidence 468999999999 9999999998888999999999999963 677888999999999999753
Q ss_pred ------------------------------------------cCCc-EEEEecCCCChhhHHHHHHHHHHcCCCEEEEec
Q 023070 75 ------------------------------------------LNVP-VSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHG 111 (287)
Q Consensus 75 ------------------------------------------~~~p-v~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~ 111 (287)
.++| |+||++.+++.++..++|+.++++|+|+|++|+
T Consensus 253 ~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~n 332 (443)
T 1tv5_A 253 IMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISN 332 (443)
T ss_dssp -----------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEC
Confidence 3678 999999998888899999999999999999999
Q ss_pred cCCCCc---------CCCCccc----cHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh-Ccc
Q 023070 112 RTRDEK---------DGKKFRA----DWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPA 175 (287)
Q Consensus 112 rt~~~~---------~~~~~~~----~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~-nP~ 175 (287)
++.... .+.+|++ .++.++++++.+ ++|||++|||.|++|+.+++. .|||+||+||+++. +||
T Consensus 333 tt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~-aGAd~Vqigrall~~gP~ 411 (443)
T 1tv5_A 333 TTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIE-AGASVCQLYSCLVFNGMK 411 (443)
T ss_dssp CBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHH-TTEEEEEESHHHHHHGGG
T ss_pred CCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHHhcChH
Confidence 876321 1122332 468899999998 899999999999999999998 58999999999875 999
Q ss_pred chhchh
Q 023070 176 LFAGFR 181 (287)
Q Consensus 176 lf~~~~ 181 (287)
++.++.
T Consensus 412 l~~~i~ 417 (443)
T 1tv5_A 412 SAVQIK 417 (443)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998775
No 20
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.95 E-value=1.1e-27 Score=218.66 Aligned_cols=169 Identities=18% Similarity=0.276 Sum_probs=144.9
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHc-CCCC---EEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE
Q 023070 7 EDRPLFVQFCANDPEILLNAARRVE-PYCD---YVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK 82 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~~~-~g~d---~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK 82 (287)
.+.|+++||+|+++++|.++|+.++ .|+| +|+||++||+. .+ |..+..+++.+.++++++++.+++||++|
T Consensus 92 ~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g----~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK 166 (314)
T 2e6f_A 92 SKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PG----KPQVAYDFEAMRTYLQQVSLAYGLPFGVK 166 (314)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TT----CCCGGGSHHHHHHHHHHHHHHHCSCEEEE
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CC----chhhcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4789999999999999999999775 4899 99999999996 11 45666789999999999999889999999
Q ss_pred ecCCCChhhHHHHHHHHHHcC-CCEEEEeccCC-----C---C---------cCCCCc----cccHHHHHHHHhhC-CCc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAG-CSLLAVHGRTR-----D---E---------KDGKKF----RADWNAIKAVKNAL-RIP 139 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G-~~~I~vh~rt~-----~---~---------~~~~~~----~~~~~~i~~i~~~~-~ip 139 (287)
++.+++.++..++++.++++| +++|++|+++. + . ..+.++ +..|+.++++++.+ ++|
T Consensus 167 ~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ip 246 (314)
T 2e6f_A 167 MPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKL 246 (314)
T ss_dssp ECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCC
Confidence 999888788889999999999 99999998761 1 0 001112 23478999999998 999
Q ss_pred EEEecCCCCHHHHHHHHHhcCccEEEEehhhhh-Cccchhchh
Q 023070 140 VLANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFR 181 (287)
Q Consensus 140 Vi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~-nP~lf~~~~ 181 (287)
||++|||+|++|+.+++. .|||+||+||+++. +||++.++.
T Consensus 247 vi~~GGI~~~~da~~~l~-~GAd~V~ig~~~l~~~p~~~~~i~ 288 (314)
T 2e6f_A 247 VFGCGGVYSGEDAFLHIL-AGASMVQVGTALQEEGPGIFTRLE 288 (314)
T ss_dssp EEEESSCCSHHHHHHHHH-HTCSSEEECHHHHHHCTTHHHHHH
T ss_pred EEEECCCCCHHHHHHHHH-cCCCEEEEchhhHhcCcHHHHHHH
Confidence 999999999999999997 58999999999996 999998775
No 21
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.95 E-value=1.7e-27 Score=221.75 Aligned_cols=163 Identities=15% Similarity=0.197 Sum_probs=141.1
Q ss_pred HHHHHHHHHHH-cCCCCEEEEecc---------CChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCC-
Q 023070 20 PEILLNAARRV-EPYCDYVDINLG---------CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF- 86 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN~g---------cP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g- 86 (287)
.++|++||+.+ ++|||+||||++ ||..|.|+|.||+++++|++++.+++++|++.+ ++||.+|++..
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~ 236 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLE 236 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchh
Confidence 47899999865 569999999965 899999999999999999999999999999998 58999999873
Q ss_pred ------CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCC--CCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q 023070 87 ------PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG--KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 87 ------~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~--~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~ 158 (287)
++.+++.++++.+++.|+++|+||+++...... .....+++.++.+++.+++||+++|||+|++++.++++.
T Consensus 237 ~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~ 316 (363)
T 3l5l_A 237 YDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQA 316 (363)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHT
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHC
Confidence 456688999999999999999999764332111 111257889999999999999999999999999999997
Q ss_pred cCccEEEEehhhhhCccchhchhh
Q 023070 159 TGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 159 ~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
++||+|++||+++.||+|+.++..
T Consensus 317 G~aD~V~iGR~~lanPdl~~k~~~ 340 (363)
T 3l5l_A 317 NQLDLVSVGRAHLADPHWAYFAAK 340 (363)
T ss_dssp TSCSEEECCHHHHHCTTHHHHHHH
T ss_pred CCccEEEecHHHHhCchHHHHHHH
Confidence 669999999999999999998874
No 22
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.95 E-value=3e-27 Score=219.36 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=134.0
Q ss_pred HHHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCCC-
Q 023070 20 PEILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP- 87 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g~- 87 (287)
.++|++||+.+ ++|||+||||++| |..|.|+|.||+++++|++++.+++++|+++++ .||++|++...
T Consensus 152 i~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~ 231 (362)
T 4ab4_A 152 VEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRAD 231 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccc
Confidence 47899999855 5799999999988 999999999999999999999999999999884 39999999742
Q ss_pred --------ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 88 --------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 88 --------~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
+.+++.++++.++++|+++|+||+++. + + +.++.+++.+++|||++||| |+++++++++.+
T Consensus 232 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~----~---~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g 300 (362)
T 4ab4_A 232 AHDMGDADRAETFTYVARELGKRGIAFICSREREA----D---D---SIGPLIKEAFGGPYIVNERF-DKASANAALASG 300 (362)
T ss_dssp SSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC----T---T---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTT
T ss_pred ccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC----C---H---HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcC
Confidence 134678999999999999999998861 1 1 34678888889999999999 999999999987
Q ss_pred CccEEEEehhhhhCccchhchhh
Q 023070 160 GCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+||+|++||+++.||||+.+++.
T Consensus 301 ~aD~V~iGR~~lanPdl~~k~~~ 323 (362)
T 4ab4_A 301 KADAVAFGVPFIANPDLPARLAA 323 (362)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHT
T ss_pred CccEEEECHHhHhCcHHHHHHHc
Confidence 79999999999999999998875
No 23
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=4.5e-27 Score=234.80 Aligned_cols=162 Identities=12% Similarity=0.165 Sum_probs=142.6
Q ss_pred HHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC---
Q 023070 21 EILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV--- 85 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~--- 85 (287)
++|++||+.+ ++|||+||||++| |..|.|+|.||++++++++++.+++++|++.+ ++||++|++.
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 7999999865 6799999999876 99999999999999999999999999999988 7999999985
Q ss_pred ---CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcC----CCCc-cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q 023070 86 ---FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD----GKKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE 157 (287)
Q Consensus 86 ---g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~----~~~~-~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~ 157 (287)
|++.+++.++++.++++|+++|++|+++.++.. ...+ ...++.++++++.+++||+++|||.|++++.++++
T Consensus 221 ~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~ 300 (671)
T 1ps9_A 221 VEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILS 300 (671)
T ss_dssp STTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHH
Confidence 577788999999999999999999987654321 1111 23468899999999999999999999999999999
Q ss_pred hcCccEEEEehhhhhCccchhchhh
Q 023070 158 ETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 158 ~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
.++||+|++||+++.||+|+.+++.
T Consensus 301 ~g~aD~V~~gR~~l~~P~l~~k~~~ 325 (671)
T 1ps9_A 301 RGDADMVSMARPFLADAELLSKAQS 325 (671)
T ss_dssp TTSCSEEEESTHHHHCTTHHHHHHT
T ss_pred cCCCCEEEeCHHHHhCcHHHHHHHc
Confidence 8679999999999999999998875
No 24
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.94 E-value=3.8e-27 Score=237.45 Aligned_cols=163 Identities=17% Similarity=0.178 Sum_probs=141.4
Q ss_pred HHHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC--
Q 023070 20 PEILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV-- 85 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~-- 85 (287)
.++|++||+.+ ++|||+||||++| |..|.|+|+||+++++|++++.+|+++|++++ ++||++|++.
T Consensus 148 i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 148 QQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 38999999965 5799999999998 99999999999999999999999999999998 7999999985
Q ss_pred -----CCC-hhhHHHHHHHHHHcCCCEEEEeccCC---CC---cCCC-CccccHHHHHHHHhhCCCcEEEecCCCCHHHH
Q 023070 86 -----FPN-LQDTIKYAKMLEDAGCSLLAVHGRTR---DE---KDGK-KFRADWNAIKAVKNALRIPVLANGNVRHMEDV 152 (287)
Q Consensus 86 -----g~~-~~~~~~~a~~l~~~G~~~I~vh~rt~---~~---~~~~-~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da 152 (287)
|++ .+++.++++.+++ |+|+|.||.++. .. ...+ +...+++.++.+++.+++|||++|||.|++++
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a 306 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKM 306 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHH
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHH
Confidence 455 5788999999988 799999998752 10 0111 11236889999999999999999999999999
Q ss_pred HHHHHhcCccEEEEehhhhhCccchhchhhh
Q 023070 153 QKCLEETGCEGVLSAESLLENPALFAGFRTA 183 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~nP~lf~~~~~~ 183 (287)
.++++.++||+||+||+++.||||+.+++..
T Consensus 307 ~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g 337 (729)
T 1o94_A 307 IEIVTKGYADIIGCARPSIADPFLPQKVEQG 337 (729)
T ss_dssp HHHHHTTSCSBEEESHHHHHCTTHHHHHHTT
T ss_pred HHHHHCCCCCEEEeCchhhcCchHHHHHHcC
Confidence 9999987799999999999999999988753
No 25
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.94 E-value=5.3e-27 Score=217.61 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=134.0
Q ss_pred HHHHHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccCC-cEEEEecCCC-
Q 023070 20 PEILLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVFP- 87 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~-pv~vKiR~g~- 87 (287)
.++|++||+.+ ++|||+||||++| |..|.|+|.||+++++|++++.+++++|++.++. ||++|++...
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~ 239 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD 239 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc
Confidence 47899999865 5799999999988 9999999999999999999999999999998843 9999999731
Q ss_pred --------ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 88 --------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 88 --------~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
+.+++.++++.++++|+++|+||+++. . + +.++.+++.+++|||++||| |+++++++++.+
T Consensus 240 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~----~---~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G 308 (361)
T 3gka_A 240 AHTMGDSDPAATFGHVARELGRRRIAFLFARESFG----G---D---AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAG 308 (361)
T ss_dssp SSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS----T---T---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC----C---H---HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcC
Confidence 134678999999999999999998761 1 1 34678888889999999999 999999999987
Q ss_pred CccEEEEehhhhhCccchhchhh
Q 023070 160 GCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+||+|++||+++.||||+.+++.
T Consensus 309 ~aD~V~iGR~~ladPdl~~k~~~ 331 (361)
T 3gka_A 309 QADAVAWGKLFIANPDLPRRFKL 331 (361)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHH
T ss_pred CccEEEECHHhHhCcHHHHHHHh
Confidence 79999999999999999998875
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.94 E-value=2.3e-26 Score=209.21 Aligned_cols=167 Identities=19% Similarity=0.293 Sum_probs=140.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHc--CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVE--PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 85 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~--~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~ 85 (287)
+.|+++||+|++++++.++++.++ .|+|+|+||++||+.+.+ |..+..+++++.++++++++.+++||++|++.
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g----~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~ 173 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG----GQAFGTDPEVAAALVKACKAVSKVPLYVKLSP 173 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT----TEEGGGCHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc----hhhhcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 789999999999999999999876 799999999999996533 45556799999999999999889999999997
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEe---------ccCCCCc-----CCCCcccc----HHHHHHHHhhCCCcEEEecCCC
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVH---------GRTRDEK-----DGKKFRAD----WNAIKAVKNALRIPVLANGNVR 147 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh---------~rt~~~~-----~~~~~~~~----~~~i~~i~~~~~ipVi~nGgI~ 147 (287)
++ .+..++++.++++|+|+|++. .++.... .++.++.. ++.++++++.+++|||++|||+
T Consensus 174 ~~--~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~ 251 (311)
T 1ep3_A 174 NV--TDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVA 251 (311)
T ss_dssp CS--SCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCC
T ss_pred Ch--HHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcC
Confidence 65 356788999999999999994 3333210 11223333 4788899998999999999999
Q ss_pred CHHHHHHHHHhcCccEEEEehhhhhCccchhchh
Q 023070 148 HMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 148 s~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
|++|+.++++ .|||+|++||+++.+|+++.++.
T Consensus 252 ~~~d~~~~l~-~GAd~V~vg~~~l~~p~~~~~i~ 284 (311)
T 1ep3_A 252 NAQDVLEMYM-AGASAVAVGTANFADPFVCPKII 284 (311)
T ss_dssp SHHHHHHHHH-HTCSEEEECTHHHHCTTHHHHHH
T ss_pred CHHHHHHHHH-cCCCEEEECHHHHcCcHHHHHHH
Confidence 9999999998 58999999999999999988764
No 27
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.94 E-value=1.1e-26 Score=232.57 Aligned_cols=161 Identities=18% Similarity=0.158 Sum_probs=138.6
Q ss_pred HHHHHHHHHH-cCCCCEEEEecc----------CChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC--
Q 023070 21 EILLNAARRV-EPYCDYVDINLG----------CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV-- 85 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN~g----------cP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~-- 85 (287)
++|++||+.+ ++|||+||||++ ||..|.|+|.||+++++|++++.+|+++|++.+ ++||.+|+..
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~ 235 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEE 235 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccc
Confidence 8999999966 469999999754 677899999999999999999999999999998 5788888854
Q ss_pred ----CCChhhHHHHHHHHHHcCCCEEEEeccCCCC----cCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q 023070 86 ----FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE----KDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE 157 (287)
Q Consensus 86 ----g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~----~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~ 157 (287)
|++.+++.++++.+++ |+|+|+||+++... ....+...+++.++.+++.+++|||++|||+++++++++++
T Consensus 236 ~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~ 314 (690)
T 3k30_A 236 EIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIK 314 (690)
T ss_dssp CSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHH
Confidence 5667889999999998 89999999875321 01112235678899999999999999999999999999999
Q ss_pred hcCccEEEEehhhhhCccchhchhh
Q 023070 158 ETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 158 ~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+++||+||+||+++.||||+.+++.
T Consensus 315 ~g~~d~v~~gR~~~~~P~~~~~~~~ 339 (690)
T 3k30_A 315 AGILDLIGAARPSIADPFLPNKIRD 339 (690)
T ss_dssp TTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred CCCcceEEEcHHhHhCccHHHHHHc
Confidence 8789999999999999999999875
No 28
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.93 E-value=1.3e-25 Score=209.81 Aligned_cols=158 Identities=14% Similarity=0.118 Sum_probs=136.9
Q ss_pred CCHHHHHHHHHHH--cCCCCEEEEeccC---------Chhhhh-cCcccc-cccCChHHHHHHHHHHhhccC-CcEEEEe
Q 023070 18 NDPEILLNAARRV--EPYCDYVDINLGC---------PQRIAR-RGNYGA-FLMDNLPLVKSLVEKLALNLN-VPVSCKI 83 (287)
Q Consensus 18 ~~~~~~~~aA~~~--~~g~d~IdiN~gc---------P~~~~~-~~~~G~-~l~~~~~~~~~iv~~v~~~~~-~pv~vKi 83 (287)
.-.++|++||+.+ ++|||+||||++| |..|.| +|.||+ +++++++++.+++++|+++++ .||.+|+
T Consensus 171 ~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRi 250 (379)
T 3aty_A 171 GIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRI 250 (379)
T ss_dssp THHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 4567889999854 5699999999875 999999 999999 999999999999999999885 4899999
Q ss_pred cCC---------CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q 023070 84 RVF---------PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQK 154 (287)
Q Consensus 84 R~g---------~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~ 154 (287)
+.. ++.+++.++++.+++.|+++|++|+++... ... ..+ ++.+++.+++|||++||| |++++.+
T Consensus 251 s~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-~~~----~~~-~~~ir~~~~iPvi~~G~i-t~~~a~~ 323 (379)
T 3aty_A 251 SPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN-QQI----GDV-VAWVRGSYSGVKISNLRY-DFEEADQ 323 (379)
T ss_dssp CTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS-CCC----CCH-HHHHHTTCCSCEEEESSC-CHHHHHH
T ss_pred CcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC-CCc----cHH-HHHHHHHCCCcEEEECCC-CHHHHHH
Confidence 883 234578899999999999999999876432 111 226 889999999999999999 9999999
Q ss_pred HHHhcCccEEEEehhhhhCccchhchhh
Q 023070 155 CLEETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+++.++||+||+||+++.||+|+.+++.
T Consensus 324 ~l~~g~aD~V~igR~~l~~P~l~~k~~~ 351 (379)
T 3aty_A 324 QIREGKVDAVAFGAKFIANPDLVERAQQ 351 (379)
T ss_dssp HHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred HHHcCCCeEEEecHHHHhCcHHHHHHHc
Confidence 9998779999999999999999998874
No 29
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.92 E-value=1.7e-25 Score=209.62 Aligned_cols=161 Identities=20% Similarity=0.221 Sum_probs=133.4
Q ss_pred HH-HHHHHHHH-cCCCCEEEEeccC---------ChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCCC-
Q 023070 21 EI-LLNAARRV-EPYCDYVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP- 87 (287)
Q Consensus 21 ~~-~~~aA~~~-~~g~d~IdiN~gc---------P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g~- 87 (287)
++ |++||+.+ ++|||+||||++| |..|.|+|.||+++++|++++.+|+++|++.++ .||++|++...
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~ 246 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWAT 246 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccc
Confidence 56 99999865 5799999999999 999999999999999999999999999999885 48999999732
Q ss_pred --------C----hhhHHHHHHHH---HHcC--CCEEEEe-ccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCH
Q 023070 88 --------N----LQDTIKYAKML---EDAG--CSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHM 149 (287)
Q Consensus 88 --------~----~~~~~~~a~~l---~~~G--~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~ 149 (287)
+ .++..++++.+ ++.| +++|+|| +|+..+.... ...+|+.+..+++..++|||+||||.+.
T Consensus 247 ~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~-~~~~~~~~~~ir~~~~~PvI~~Ggi~~~ 325 (407)
T 3tjl_A 247 FQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVS-EEDQAGDNEFVSKIWKGVILKAGNYSYD 325 (407)
T ss_dssp GGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECC-GGGCCCCSHHHHHHCCSEEEEESCGGGG
T ss_pred cCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCC-ccchhHHHHHHHHHhCCCEEecCCCCCH
Confidence 2 23467899999 8889 9999998 6654332111 1123455677888888999999999999
Q ss_pred HHHHHHHHh---cCccEEEEehhhhhCccchhchhh
Q 023070 150 EDVQKCLEE---TGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 150 ~da~~~l~~---~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+++.++++. ++||+||+||+++.||||+.+++.
T Consensus 326 ~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~ 361 (407)
T 3tjl_A 326 APEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRD 361 (407)
T ss_dssp TTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEeChhhhhCchHHHHHHc
Confidence 888888876 789999999999999999998875
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.91 E-value=6.6e-24 Score=220.81 Aligned_cols=168 Identities=18% Similarity=0.309 Sum_probs=138.6
Q ss_pred CCCEEEEe-cCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC
Q 023070 8 DRPLFVQF-CANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 85 (287)
Q Consensus 8 ~~p~~~Qi-~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~ 85 (287)
+.|+++|+ +|+++++|.++++.+ +.|+|+|+||++||+. .+.+++|++++++++++.++++++++.+++||++|++.
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~ 712 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP 712 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 57888887 688999999999977 5699999999999998 55677999999999999999999999999999999987
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEe----------------------ccCCCCcCCCCccccH----HHHHHHHhhC-CC
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVH----------------------GRTRDEKDGKKFRADW----NAIKAVKNAL-RI 138 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh----------------------~rt~~~~~~~~~~~~~----~~i~~i~~~~-~i 138 (287)
+. .+..++++.++++|+++|+++ +|+..+ ++++++.| +.++++++.+ ++
T Consensus 713 ~~--~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~g--g~sg~~~~~~~~~~v~~v~~~~~~i 788 (1025)
T 1gte_A 713 NV--TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYG--GVSGTAIRPIALRAVTTIARALPGF 788 (1025)
T ss_dssp CS--SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCE--EEESGGGHHHHHHHHHHHHHHSTTC
T ss_pred Ch--HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCC--CCCcccchhHHHHHHHHHHHHcCCC
Confidence 43 478899999999999999993 333221 23345554 6789999988 89
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh-Cccchhchh
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFR 181 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~-nP~lf~~~~ 181 (287)
|||++|||+|++|+.+++. .|||+||+||+++. +|.++.++.
T Consensus 789 pvi~~GGI~s~~da~~~l~-~Ga~~v~vg~~~l~~~~~~~~~~~ 831 (1025)
T 1gte_A 789 PILATGGIDSAESGLQFLH-SGASVLQVCSAVQNQDFTVIQDYC 831 (1025)
T ss_dssp CEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHTSCTTHHHHHH
T ss_pred CEEEecCcCCHHHHHHHHH-cCCCEEEEeeccccCCccHHHHHH
Confidence 9999999999999999998 69999999999998 555665443
No 31
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.85 E-value=5.1e-21 Score=177.62 Aligned_cols=161 Identities=19% Similarity=0.229 Sum_probs=129.2
Q ss_pred HHHHHHHHHHH-cCCCCEEEEe---------ccCChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCC--
Q 023070 20 PEILLNAARRV-EPYCDYVDIN---------LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVF-- 86 (287)
Q Consensus 20 ~~~~~~aA~~~-~~g~d~IdiN---------~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g-- 86 (287)
.++|++||+.+ ++|||+|||| |.+|..|.|+|.||+++.+|.+++.||+++|++.++ -+|.+|+...
T Consensus 151 i~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~ 230 (358)
T 4a3u_A 151 LDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGE 230 (358)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSC
T ss_pred HHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcc
Confidence 36899999965 5799999999 459999999999999999999999999999999883 4588888752
Q ss_pred ----C---ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 87 ----P---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 87 ----~---~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
. +.+....+++.+.+.|++++.++.......... .....+.+.+++....||++ ||+.|++.++++|+++
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~a~~ik~~~~~~v~~-~g~~~~~~ae~~l~~G 307 (358)
T 4a3u_A 231 IQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGK--TDQPKLSPEIRKVFKPPLVL-NQDYTFETAQAALDSG 307 (358)
T ss_dssp BTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSB--CSSCCCHHHHHHHCCSCEEE-ESSCCHHHHHHHHHHT
T ss_pred cCCCcccchHHHHHHHHHhhhccCccccccccccccCcccc--cccHHHHHHHHHhcCCcEEE-eCCCCHHHHHHHHHcC
Confidence 1 223456778889999999999986654432221 12223456777777777775 6678999999999987
Q ss_pred CccEEEEehhhhhCccchhchhhh
Q 023070 160 GCEGVLSAESLLENPALFAGFRTA 183 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~~~~~ 183 (287)
.||.|.+||++++||+|.++++..
T Consensus 308 ~aD~V~~gR~~ladPdlp~k~~~g 331 (358)
T 4a3u_A 308 VADAISFGRPFIGNPDLPRRFFEK 331 (358)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHHT
T ss_pred CceEeHhhHHHHhChhHHHHHHhC
Confidence 799999999999999999998753
No 32
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.84 E-value=2.8e-20 Score=172.52 Aligned_cols=170 Identities=15% Similarity=0.179 Sum_probs=124.4
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHc----CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEE
Q 023070 6 PEDRPLFVQFCANDPEILLNAARRVE----PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC 81 (287)
Q Consensus 6 ~~~~p~~~Qi~g~~~~~~~~aA~~~~----~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~v 81 (287)
..+.|+++||+|++++++.+.++.+. .++|+|+||++||+.. .|..+..+++.+.++++++++.+..|+.+
T Consensus 124 ~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~~~~pv~v 198 (354)
T 3tjx_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEVYPHSFGV 198 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHHhhccccc
Confidence 44789999999999999988877442 3789999999999853 25678889999999999999999999999
Q ss_pred EecCCCChhhHHHHHHHHHHcC-CCEEEE----------eccCCC-------CcCCCCccccHH----HHHHHHhhC-CC
Q 023070 82 KIRVFPNLQDTIKYAKMLEDAG-CSLLAV----------HGRTRD-------EKDGKKFRADWN----AIKAVKNAL-RI 138 (287)
Q Consensus 82 KiR~g~~~~~~~~~a~~l~~~G-~~~I~v----------h~rt~~-------~~~~~~~~~~~~----~i~~i~~~~-~i 138 (287)
|++..++.......+..+.+.+ ++.++. ..++.. +..+.+|++.|+ .++++++.+ ++
T Consensus 199 K~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~ 278 (354)
T 3tjx_A 199 KMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGK 278 (354)
T ss_dssp EECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTS
T ss_pred ccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCC
Confidence 9999887666556666666554 333322 111111 112234566654 455665554 69
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhh-hhCccchhchh
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESL-LENPALFAGFR 181 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~-l~nP~lf~~~~ 181 (287)
|||++|||.|.+|+.+++. .|||+|||||++ +.+|+++.++.
T Consensus 279 pIIg~GGI~s~~Da~e~i~-aGAs~Vqv~Ta~~y~GP~~~~~I~ 321 (354)
T 3tjx_A 279 LIFGCGGVYTGEDAFLHVL-AGASMVQVGTALQEEGPSIFERLT 321 (354)
T ss_dssp EEEEESSCCSHHHHHHHHH-HTEEEEEECHHHHHHCTTHHHHHH
T ss_pred cEEEeCCcCCHHHHHHHHH-cCCCEEEEChhhhhcCchHHHHHH
Confidence 9999999999999999998 699999999996 58999998774
No 33
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.81 E-value=2e-19 Score=167.30 Aligned_cols=155 Identities=19% Similarity=0.219 Sum_probs=123.2
Q ss_pred CCCEEEEecC-CCHHHHHHHHHHHc-CCCCEEEEeccCChh------------------hhhc----Ccccccc---c--
Q 023070 8 DRPLFVQFCA-NDPEILLNAARRVE-PYCDYVDINLGCPQR------------------IARR----GNYGAFL---M-- 58 (287)
Q Consensus 8 ~~p~~~Qi~g-~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~------------------~~~~----~~~G~~l---~-- 58 (287)
+.|+.+||++ +|++...++++.++ .|+++|+||++||.. +... ...|+.+ +
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 6799999988 89999999998765 599999999999982 2210 3346655 3
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--
Q 023070 59 DNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-- 136 (287)
Q Consensus 59 ~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-- 136 (287)
.++.+..++++++++.+++||++|.- .+.+.++.++++|+|+|+|++....+ ...+++.|+.+.++++.+
T Consensus 212 ~d~~~~~~~i~~lr~~~~~PvivK~v------~~~e~a~~a~~~Gad~I~vs~~ggr~--~~~g~~~~~~l~~v~~~v~~ 283 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHSGLPVFVKGI------QHPEDADMAIKRGASGIWVSNHGARQ--LYEAPGSFDTLPAIAERVNK 283 (368)
T ss_dssp BCSBCCHHHHHHHHHHSSSCEEEEEE------CSHHHHHHHHHTTCSEEEECCGGGTS--CSSCCCHHHHHHHHHHHHTT
T ss_pred cCchhhHHHHHHHHHHcCCCEEEEcC------CCHHHHHHHHHcCCCEEEEcCCCcCC--CCCCCChHHHHHHHHHHhCC
Confidence 37788889999999999999999942 23567889999999999995543222 234578899999999887
Q ss_pred CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 137 RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 137 ~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
++|||++|||++++|+.++|. .|||+|||||+++
T Consensus 284 ~ipVia~GGI~~g~D~~kala-lGAd~V~iGr~~l 317 (368)
T 2nli_A 284 RVPIVFDSGVRRGEHVAKALA-SGADVVALGRPVL 317 (368)
T ss_dssp SSCEEECSSCCSHHHHHHHHH-TTCSEEEECHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHH-cCCCEEEECHHHH
Confidence 699999999999999999999 6999999999655
No 34
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.80 E-value=1.2e-19 Score=170.66 Aligned_cols=163 Identities=15% Similarity=0.138 Sum_probs=119.6
Q ss_pred HHHHHHHHHH-cCCCCEEEEe---------ccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCC--
Q 023070 21 EILLNAARRV-EPYCDYVDIN---------LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFP-- 87 (287)
Q Consensus 21 ~~~~~aA~~~-~~g~d~IdiN---------~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~-- 87 (287)
++|++||+.+ ++|||+|||| |.+|..|.|+|.||+++.+|.+++.||+++|++++ ..||.+|+....
T Consensus 172 ~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~ 251 (400)
T 4gbu_A 172 KEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVF 251 (400)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 5899999965 5799999999 56999999999999999999999999999999988 358999987521
Q ss_pred ----C------hhhHHHHHHHHHHcC-----CCEEEEeccCCCCcCC--CCccccHHHHHHHHhhCCCcEEEecCCCCHH
Q 023070 88 ----N------LQDTIKYAKMLEDAG-----CSLLAVHGRTRDEKDG--KKFRADWNAIKAVKNALRIPVLANGNVRHME 150 (287)
Q Consensus 88 ----~------~~~~~~~a~~l~~~G-----~~~I~vh~rt~~~~~~--~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~ 150 (287)
+ ..+..+++..++..+ .+++.+.......... ..+.........+++.+++|||++|||.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~~~~~~ 331 (400)
T 4gbu_A 252 NSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHP 331 (400)
T ss_dssp TTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESSCTTCH
T ss_pred CCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCCCCChH
Confidence 1 123445566665443 4455554322111100 0001111123346777899999999999877
Q ss_pred HHHHHHHhcCccEEEEehhhhhCccchhchhhh
Q 023070 151 DVQKCLEETGCEGVLSAESLLENPALFAGFRTA 183 (287)
Q Consensus 151 da~~~l~~~gad~VmiGR~~l~nP~lf~~~~~~ 183 (287)
++.+.+...+||.|.+||++++||+|.++++..
T Consensus 332 ~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G 364 (400)
T 4gbu_A 332 EVVREEVKDKRTLIGYGRFFISNPDLVDRLEKG 364 (400)
T ss_dssp HHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHT
T ss_pred HHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcC
Confidence 877777668999999999999999999998763
No 35
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.79 E-value=2.1e-18 Score=159.56 Aligned_cols=154 Identities=17% Similarity=0.184 Sum_probs=114.4
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHH--HHHHHHHHhhccCCcEEEEe
Q 023070 7 EDRPLFVQFC-ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPL--VKSLVEKLALNLNVPVSCKI 83 (287)
Q Consensus 7 ~~~p~~~Qi~-g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~--~~~iv~~v~~~~~~pv~vKi 83 (287)
.+.|+++|+. |.+++.+.++++. .|+|+|+||++||+...... | ++++ +.++++++++.+++||.+|+
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~--~gad~i~i~~~~~~~~~~~~--~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~ 185 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEM--IGANALQIHLNVIQEIVMPE--G-----DRSFSGALKRIEQICSRVSVPVIVKE 185 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHH--TTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEE
T ss_pred CCceeEEeecCCCCHHHHHHHHHh--cCCCeEEecccchhhhcCCC--C-----CcchHHHHHHHHHHHHHcCCCEEEEe
Confidence 4689999999 8899887765443 48999999999998543321 1 3443 77899999988899999998
Q ss_pred -cCCCChhhHHHHHHHHHHcCCCEEEE--eccCCCC-----cC-------CCCccccHHHHHHHHhhC-CCcEEEecCCC
Q 023070 84 -RVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDE-----KD-------GKKFRADWNAIKAVKNAL-RIPVLANGNVR 147 (287)
Q Consensus 84 -R~g~~~~~~~~~a~~l~~~G~~~I~v--h~rt~~~-----~~-------~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~ 147 (287)
..+.+ .+.++.+.++|+|+|+| ||+|... +. ...+.+.++.++++++.+ ++|||++|||+
T Consensus 186 ~~~~~~----~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~ 261 (349)
T 1p0k_A 186 VGFGMS----KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQ 261 (349)
T ss_dssp ESSCCC----HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred cCCCCC----HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCC
Confidence 44444 45688899999999999 7665210 10 123456788899998886 89999999999
Q ss_pred CHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 148 HMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 148 s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
|++|+.+++. .|||+|++||+++..+
T Consensus 262 ~~~d~~k~l~-~GAd~V~iG~~~l~~~ 287 (349)
T 1p0k_A 262 DALDVAKAIA-LGASCTGMAGHFLKAL 287 (349)
T ss_dssp SHHHHHHHHH-TTCSEEEECHHHHHHH
T ss_pred CHHHHHHHHH-cCCCEEEEcHHHHHHH
Confidence 9999999998 5999999999887654
No 36
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.76 E-value=2.9e-18 Score=160.70 Aligned_cols=157 Identities=15% Similarity=0.151 Sum_probs=121.0
Q ss_pred CCCCEEEEecC-CCHHHHHHHHHHHc-CCCCEEEEeccCChh---------------hh-----h------cC----ccc
Q 023070 7 EDRPLFVQFCA-NDPEILLNAARRVE-PYCDYVDINLGCPQR---------------IA-----R------RG----NYG 54 (287)
Q Consensus 7 ~~~p~~~Qi~g-~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~---------------~~-----~------~~----~~G 54 (287)
.+.|+.+||++ .|++...+.++.++ .|+++|+||++||.. .. . .. +.|
T Consensus 145 ~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g 224 (392)
T 2nzl_A 145 PEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDD 224 (392)
T ss_dssp TTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC----------------
T ss_pred CCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCc
Confidence 36799999987 79999999888775 599999999999984 11 0 00 112
Q ss_pred c---cccC---ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHH
Q 023070 55 A---FLMD---NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNA 128 (287)
Q Consensus 55 ~---~l~~---~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~ 128 (287)
+ .++. +|++..+.++++++.+++||.+|.- ...+.++.++++|+|+|+|+++...+ ...+++.|+.
T Consensus 225 ~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv------~~~e~A~~a~~aGad~I~vs~~ggr~--~~~g~~~~~~ 296 (392)
T 2nzl_A 225 SGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI------LRGDDAREAVKHGLNGILVSNHGARQ--LDGVPATIDV 296 (392)
T ss_dssp -CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEE------CCHHHHHHHHHTTCCEEEECCGGGTS--STTCCCHHHH
T ss_pred chHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEec------CCHHHHHHHHHcCCCEEEeCCCCCCc--CCCCcChHHH
Confidence 2 2444 7777888899999999999999942 12566889999999999996554322 2334788999
Q ss_pred HHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 129 IKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 129 i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+.++++.+ ++|||++|||++++|+.++|. .|||+||+||+++.
T Consensus 297 l~~v~~av~~~ipVia~GGI~~g~Dv~kala-lGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 297 LPEIVEAVEGKVEVFLDGGVRKGTDVLKALA-LGAKAVFVGRPIVW 341 (392)
T ss_dssp HHHHHHHHTTSSEEEECSSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred HHHHHHHcCCCCEEEEECCCCCHHHHHHHHH-hCCCeeEECHHHHH
Confidence 99999877 599999999999999999999 69999999997664
No 37
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3e-18 Score=152.30 Aligned_cols=152 Identities=15% Similarity=0.163 Sum_probs=118.2
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCC-----hHHHHHHHHHHh-hccCCcEEEE
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDN-----LPLVKSLVEKLA-LNLNVPVSCK 82 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~-----~~~~~~iv~~v~-~~~~~pv~vK 82 (287)
.|+-+|++|.-.. . ++.+++ .|+|.|-+ |++++++ |+++.++++++. +.+-+++.+|
T Consensus 75 ~~~pv~vgGGir~-~-~~~~~l-~Ga~~Vii--------------gs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k 137 (260)
T 2agk_A 75 SPQFLQVGGGIND-T-NCLEWL-KWASKVIV--------------TSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCR 137 (260)
T ss_dssp STTTSEEESSCCT-T-THHHHT-TTCSCEEE--------------CGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEE
T ss_pred CCceEEEeCCCCH-H-HHHHHh-cCCCEEEE--------------CcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEee
Confidence 3556788887763 4 777777 88887765 5788888 999999999997 5444555555
Q ss_pred ec---------CCCChh---hHH-HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC----CCcEEEecC
Q 023070 83 IR---------VFPNLQ---DTI-KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL----RIPVLANGN 145 (287)
Q Consensus 83 iR---------~g~~~~---~~~-~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~----~ipVi~nGg 145 (287)
.+ .||... ++. ++++.+++. ++.|++|+++++++..+ .||+.++++++.+ ++|||++||
T Consensus 138 ~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G---~d~eli~~l~~~~~~~~~iPVIasGG 213 (260)
T 2agk_A 138 KTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLCGG---IDELLVSKLFEWTKDYDDLKIVYAGG 213 (260)
T ss_dssp EEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-------CC---CCHHHHHHHHHHHTTCSSCEEEEESC
T ss_pred ecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCcCC---CCHHHHHHHHHhhcccCCceEEEeCC
Confidence 32 156432 556 999999999 99999999999876543 5999999999998 999999999
Q ss_pred CCCHHHHHHHHHhc-CccEEEEehhh--hhCc-cchhchh
Q 023070 146 VRHMEDVQKCLEET-GCEGVLSAESL--LENP-ALFAGFR 181 (287)
Q Consensus 146 I~s~~da~~~l~~~-gad~VmiGR~~--l~nP-~lf~~~~ 181 (287)
|.|++|+.++++.+ |||+||+||++ +.+| |.|.++.
T Consensus 214 i~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~ 253 (260)
T 2agk_A 214 AKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCC 253 (260)
T ss_dssp CCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHH
Confidence 99999999999877 99999999997 9999 9988764
No 38
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.73 E-value=4e-17 Score=152.11 Aligned_cols=155 Identities=22% Similarity=0.227 Sum_probs=119.3
Q ss_pred CCEEEEec-CCCHHHHHHHHHHHc-CCCCEEEEeccCChh--------------------hhhc-------Ccccccc--
Q 023070 9 RPLFVQFC-ANDPEILLNAARRVE-PYCDYVDINLGCPQR--------------------IARR-------GNYGAFL-- 57 (287)
Q Consensus 9 ~p~~~Qi~-g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~--------------------~~~~-------~~~G~~l-- 57 (287)
.|..+||+ +.|++...+.++.++ .|++.|+||++||.. +... ...|+.+
T Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 202 (370)
T 1gox_A 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSS 202 (370)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHH
T ss_pred CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHH
Confidence 78999996 889999888888665 589999999999974 1111 1234443
Q ss_pred ----cCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHH
Q 023070 58 ----MDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK 133 (287)
Q Consensus 58 ----~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~ 133 (287)
+.++.+..+.++.+++.+++||.+|... + .+.++.+.++|+|+|+|.+....+ ...++++++.+.+++
T Consensus 203 ~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~--~----~e~a~~a~~~Gad~I~vs~~ggr~--~~~~~~~~~~l~~v~ 274 (370)
T 1gox_A 203 YVAGQIDRSLSWKDVAWLQTITSLPILVKGVI--T----AEDARLAVQHGAAGIIVSNHGARQ--LDYVPATIMALEEVV 274 (370)
T ss_dssp HHHHTBCTTCCHHHHHHHHHHCCSCEEEECCC--S----HHHHHHHHHTTCSEEEECCGGGTS--STTCCCHHHHHHHHH
T ss_pred HHHhhcCccchHHHHHHHHHHhCCCEEEEecC--C----HHHHHHHHHcCCCEEEECCCCCcc--CCCcccHHHHHHHHH
Confidence 4466666678999999899999999763 2 356788999999999994321111 223367899999999
Q ss_pred hhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 134 NAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 134 ~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+.+ ++|||++|||++++|+.+++. .|||+|||||+++.
T Consensus 275 ~~~~~~ipvia~GGI~~~~D~~k~l~-~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 275 KAAQGRIPVFLDGGVRRGTDVFKALA-LGAAGVFIGRPVVF 314 (370)
T ss_dssp HHTTTSSCEEEESSCCSHHHHHHHHH-HTCSEEEECHHHHH
T ss_pred HHhCCCCEEEEECCCCCHHHHHHHHH-cCCCEEeecHHHHH
Confidence 987 799999999999999999998 69999999998774
No 39
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.73 E-value=3.9e-17 Score=157.74 Aligned_cols=157 Identities=18% Similarity=0.185 Sum_probs=121.8
Q ss_pred CCCCEEEEec-CCCHHHHHHHHHHHcC-CCCEEEEeccCCh-hh----hhc-----------------Ccccc--ccc--
Q 023070 7 EDRPLFVQFC-ANDPEILLNAARRVEP-YCDYVDINLGCPQ-RI----ARR-----------------GNYGA--FLM-- 58 (287)
Q Consensus 7 ~~~p~~~Qi~-g~~~~~~~~aA~~~~~-g~d~IdiN~gcP~-~~----~~~-----------------~~~G~--~l~-- 58 (287)
.+.|..+||+ +.|++.+.++++.++. |+++|.|++.||+ .+ .+. +.+++ .++
T Consensus 245 ~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~ 324 (511)
T 1kbi_A 245 DKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSK 324 (511)
T ss_dssp SSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBT
T ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhh
Confidence 4678999998 8999999999997764 9999999999998 11 111 11111 233
Q ss_pred -CChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-
Q 023070 59 -DNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL- 136 (287)
Q Consensus 59 -~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~- 136 (287)
.+|.+..++++++++.+++||++|.- . ..+.++.++++|+|+|+|++....+. ..+++.|+.+.++++.+
T Consensus 325 ~~d~~~~~~~i~~lr~~~~~PvivKgv---~---~~e~A~~a~~aGad~I~vs~hgG~~~--d~~~~~~~~l~~v~~~v~ 396 (511)
T 1kbi_A 325 FIDPSLTWKDIEELKKKTKLPIVIKGV---Q---RTEDVIKAAEIGVSGVVLSNHGGRQL--DFSRAPIEVLAETMPILE 396 (511)
T ss_dssp TBCTTCCHHHHHHHHHHCSSCEEEEEE---C---SHHHHHHHHHTTCSEEEECCTTTTSS--TTCCCHHHHHHHHHHHHH
T ss_pred ccChHhHHHHHHHHHHHhCCcEEEEeC---C---CHHHHHHHHHcCCCEEEEcCCCCccC--CCCCchHHHHHHHHHHHH
Confidence 57787888899999999999999932 1 15668899999999999944322222 22356788888888876
Q ss_pred ------CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 137 ------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 137 ------~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
++|||++|||+++.|+.++|. .|||+|||||+++.
T Consensus 397 ~~~~~~~ipVia~GGI~~g~Dv~kaLa-lGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 397 QRNLKDKLEVFVDGGVRRGTDVLKALC-LGAKGVGLGRPFLY 437 (511)
T ss_dssp TTTCBTTBEEEEESSCCSHHHHHHHHH-HTCSEEEECHHHHH
T ss_pred hhccCCCcEEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHH
Confidence 799999999999999999999 69999999996663
No 40
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.71 E-value=3.7e-17 Score=159.67 Aligned_cols=170 Identities=15% Similarity=0.104 Sum_probs=130.8
Q ss_pred CCEEEEecCCCHHH----------HHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhh-ccCC
Q 023070 9 RPLFVQFCANDPEI----------LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NLNV 77 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~----------~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~-~~~~ 77 (287)
.++-+|++|.-.+. +..+.++++.|+|.|.||.+| ..+..+-..++.++.+|+++.++.+...+ .+-+
T Consensus 326 ~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv 404 (555)
T 1jvn_A 326 VFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYGAQAVVI 404 (555)
T ss_dssp CCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEE
T ss_pred CCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhCCCcEEE
Confidence 46678888876442 344555778899999999988 33322222234468899999999998743 2212
Q ss_pred cEEEEe--------------------------------cCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc
Q 023070 78 PVSCKI--------------------------------RVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF 122 (287)
Q Consensus 78 pv~vKi--------------------------------R~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~ 122 (287)
.+.+|. ..||.. .++.++++.+++.|++.|++|+++++++..+
T Consensus 405 ~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G-- 482 (555)
T 1jvn_A 405 SVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSG-- 482 (555)
T ss_dssp EECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSC--
T ss_pred EEEccccccccccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC--
Confidence 222221 124543 3578999999999999999999999876542
Q ss_pred cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchhchhh
Q 023070 123 RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 123 ~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
.||+.++++++.+++|||++|||.|++|+.++++.+|||+||+||+++.+||.|.+++.
T Consensus 483 -~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 483 -YDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp -CCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHH
T ss_pred -CCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHH
Confidence 69999999999999999999999999999999986799999999999999999998764
No 41
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.70 E-value=2.3e-16 Score=138.21 Aligned_cols=153 Identities=20% Similarity=0.260 Sum_probs=121.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc----CCc-----
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL----NVP----- 78 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~----~~p----- 78 (287)
+.|+++-.+=.+|+++.. .++.|+|.|-++ +.++.+|+.+.++++.+...+ +.+
T Consensus 74 ~ipv~v~ggi~~~~~~~~---~l~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~ 136 (244)
T 2y88_A 74 DVQVELSGGIRDDESLAA---ALATGCARVNVG--------------TAALENPQWCARVIGEHGDQVAVGLDVQIIDGE 136 (244)
T ss_dssp SSEEEEESSCCSHHHHHH---HHHTTCSEEEEC--------------HHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTE
T ss_pred CCcEEEECCCCCHHHHHH---HHHcCCCEEEEC--------------chHhhChHHHHHHHHHcCCCEEEEEeccccCCC
Confidence 457777666678776333 345688988774 556788999999999876433 222
Q ss_pred EEEEecCCCCh--hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHH
Q 023070 79 VSCKIRVFPNL--QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 156 (287)
Q Consensus 79 v~vKiR~g~~~--~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l 156 (287)
.+||+| +|.. .++.++++.+++.|++.|.+|+|++.+... ..+|+.++++++.+++||+++|||.+++|+.+++
T Consensus 137 ~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~---g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~ 212 (244)
T 2y88_A 137 HRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLG---GPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIA 212 (244)
T ss_dssp EEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTS---CCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHH
T ss_pred CEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccC---CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHH
Confidence 357777 6632 267889999999999999999998875432 2589999999998999999999999999999999
Q ss_pred Hhc--CccEEEEehhhhhCccchhchh
Q 023070 157 EET--GCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 157 ~~~--gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+.+ |||+||+||+++.+|+.+.++.
T Consensus 213 ~~~~~Gad~v~vG~al~~~~~~~~~~~ 239 (244)
T 2y88_A 213 TLTHRGVEGAIVGKALYARRFTLPQAL 239 (244)
T ss_dssp TTGGGTEEEEEECHHHHTTSSCHHHHH
T ss_pred hhccCCCCEEEEcHHHHCCCcCHHHHH
Confidence 855 9999999999999999988764
No 42
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.67 E-value=2.6e-16 Score=136.98 Aligned_cols=146 Identities=16% Similarity=0.215 Sum_probs=111.1
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEE--EeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEe---
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVD--INLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI--- 83 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~Id--iN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKi--- 83 (287)
.|+.+|+.++.+... .+.++.|+|+|| +|+|| .+.+ +++.+.+.++++++.++ |+.+|+
T Consensus 62 ~P~g~~~~~~k~~~~---~~A~~~Gad~Id~viN~g~----~~~~--------~~~~~~~~i~~v~~a~~-pv~vKvi~e 125 (225)
T 1mzh_A 62 FPLGLNKTSVKVKEA---VEAVRDGAQELDIVWNLSA----FKSE--------KYDFVVEELKEIFRETP-SAVHKVIVE 125 (225)
T ss_dssp TTTCCSCHHHHHHHH---HHHHHTTCSEEEEECCHHH----HHTT--------CHHHHHHHHHHHHHTCT-TSEEEEECC
T ss_pred CCCCccchhhhHHHH---HHHHHcCCCEEEEEecHHH----HhcC--------ChHHHHHHHHHHHHHhc-CceEEEEEe
Confidence 455666655544443 234568999999 79998 2333 34677788999999888 999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
+.+++.++..++++.++++|+|+|.. +| +. +++.++|+.++.+++.+ ++||+++|||+|++|+.++++ .||
T Consensus 126 ~~~l~~~~~~~~a~~a~eaGad~I~t--st--g~--~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~-aGA 198 (225)
T 1mzh_A 126 TPYLNEEEIKKAVEICIEAGADFIKT--ST--GF--APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIE-AGA 198 (225)
T ss_dssp GGGCCHHHHHHHHHHHHHHTCSEEEC--CC--SC--SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHH-TTC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEE--CC--CC--CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHH-hCc
Confidence 77788888899999999999999922 22 21 23457899999999876 799999999999999999998 699
Q ss_pred cEEEEehhhhhCccchhchh
Q 023070 162 EGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 162 d~VmiGR~~l~nP~lf~~~~ 181 (287)
|.|.++++ .+++.+++
T Consensus 199 ~~iG~s~~----~~i~~~~~ 214 (225)
T 1mzh_A 199 DRIGTSSG----ISIAEEFL 214 (225)
T ss_dssp SEEEESCH----HHHHHHHH
T ss_pred hHHHHccH----HHHHHHHH
Confidence 98777665 34555443
No 43
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.66 E-value=1.3e-15 Score=139.98 Aligned_cols=154 Identities=22% Similarity=0.190 Sum_probs=113.2
Q ss_pred CCCCEE-----EEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEE
Q 023070 7 EDRPLF-----VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC 81 (287)
Q Consensus 7 ~~~p~~-----~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~v 81 (287)
.+.|++ .|+++.+++.+.++++.+. +|++.+|..+.+.... + |. .+.+.+.++++++++ +++||++
T Consensus 116 ~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~--~~a~~i~~n~~~~~~~-~--~~---~~~~~~~~~i~~vr~-~~~Pv~v 186 (332)
T 1vcf_A 116 PKALLIANLGLAQLRRYGRDDLLRLVEMLE--ADALAFHVNPLQEAVQ-R--GD---TDFRGLVERLAELLP-LPFPVMV 186 (332)
T ss_dssp SSSCEEEEEEGGGGGTCCHHHHHHHHHHHT--CSEEEEECCHHHHHHT-T--SC---CCCTTHHHHHHHHCS-CSSCEEE
T ss_pred CCceeecccChhhhhccChHHHHHHHhhcC--CCceeeccchHHHHhc-C--CC---ccHHHHHHHHHHHHc-CCCCEEE
Confidence 478886 7888899999999988664 5665555443333221 1 11 122336788999999 9999999
Q ss_pred E-ecCCCChhhHHHHHHHHHHcCCCEEEE--eccC--------CCC------cCCCCccccHHHHHHHHhhC-CCcEEEe
Q 023070 82 K-IRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRT--------RDE------KDGKKFRADWNAIKAVKNAL-RIPVLAN 143 (287)
Q Consensus 82 K-iR~g~~~~~~~~~a~~l~~~G~~~I~v--h~rt--------~~~------~~~~~~~~~~~~i~~i~~~~-~ipVi~n 143 (287)
| +..|++ .+.++.++++|+|+|+| ||++ +.+ .....+.+.++.+.++++.+ ++|||++
T Consensus 187 K~v~~g~~----~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~ 262 (332)
T 1vcf_A 187 KEVGHGLS----REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVAS 262 (332)
T ss_dssp ECSSSCCC----HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEE
T ss_pred EecCCCCC----HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEE
Confidence 9 544444 34578899999999999 6654 221 00223457788999999988 7999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 144 GNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 144 GgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
|||+|++|+.++|. .|||+||+||+++..+
T Consensus 263 GGI~~~~d~~kal~-~GAd~V~igr~~l~~~ 292 (332)
T 1vcf_A 263 GGVYTGTDGAKALA-LGADLLAVARPLLRPA 292 (332)
T ss_dssp SSCCSHHHHHHHHH-HTCSEEEECGGGHHHH
T ss_pred CCCCCHHHHHHHHH-hCCChHhhhHHHHHHH
Confidence 99999999999998 5999999999877543
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.65 E-value=1.8e-15 Score=138.87 Aligned_cols=138 Identities=20% Similarity=0.264 Sum_probs=110.0
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
+.|+.+|++..+|+ +.+.++ ..+.|+|+|++|+|||.. +++.+++ .++||.+|+.
T Consensus 63 ~~p~gvnl~~~~~~-~~~~~~~a~~~g~d~V~~~~g~p~~--------------------~i~~l~~-~g~~v~~~v~-- 118 (332)
T 2z6i_A 63 DKPFGVNIMLLSPF-VEDIVDLVIEEGVKVVTTGAGNPSK--------------------YMERFHE-AGIIVIPVVP-- 118 (332)
T ss_dssp CSCEEEEECTTSTT-HHHHHHHHHHTTCSEEEECSSCGGG--------------------THHHHHH-TTCEEEEEES--
T ss_pred CCCEEEEecCCCCC-HHHHHHHHHHCCCCEEEECCCChHH--------------------HHHHHHH-cCCeEEEEeC--
Confidence 57999999997765 555555 456799999999999832 3455554 3789999872
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+.+.++.+++.|+|+|.++|+...+..+ ...+|+.++++++.+++||+++|||.|++++.+++. .|||+|++
T Consensus 119 -----~~~~a~~~~~~GaD~i~v~g~~~GG~~g--~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~-~GAdgV~v 190 (332)
T 2z6i_A 119 -----SVALAKRMEKIGADAVIAEGMEAGGHIG--KLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFM-LGAEAVQV 190 (332)
T ss_dssp -----SHHHHHHHHHTTCSCEEEECTTSSEECC--SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHH-TTCSEEEE
T ss_pred -----CHHHHHHHHHcCCCEEEEECCCCCCCCC--CccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH-cCCCEEEe
Confidence 3456788899999999999874322111 246789999999999999999999999999999998 59999999
Q ss_pred ehhhhhCccch
Q 023070 167 AESLLENPALF 177 (287)
Q Consensus 167 GR~~l~nP~lf 177 (287)
||+++.+|...
T Consensus 191 Gs~~l~~~e~~ 201 (332)
T 2z6i_A 191 GTRFVVAKESN 201 (332)
T ss_dssp CHHHHTBTTCC
T ss_pred cHHHhcCcccc
Confidence 99999999654
No 45
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.64 E-value=3.3e-15 Score=131.02 Aligned_cols=154 Identities=18% Similarity=0.236 Sum_probs=115.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE---e-
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK---I- 83 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK---i- 83 (287)
+.|+++-.+=.+|+++.+ .++.|+|.|-+ |+.++.+|+.+.++++.....+.+.+.++ +
T Consensus 75 ~ipv~v~ggI~~~~~~~~---~l~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~ 137 (244)
T 1vzw_A 75 DIKVELSGGIRDDDTLAA---ALATGCTRVNL--------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLR 137 (244)
T ss_dssp SSEEEEESSCCSHHHHHH---HHHTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEEC
T ss_pred CCcEEEECCcCCHHHHHH---HHHcCCCEEEE--------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEE
Confidence 457777666678876333 34568898876 45567789999999888764444444444 1
Q ss_pred cCCCCh--hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc--
Q 023070 84 RVFPNL--QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET-- 159 (287)
Q Consensus 84 R~g~~~--~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~-- 159 (287)
+.+|.. .+..++++.+++.|++.|.+|++++.+... ..+|+.++++++.+++||+++|||++++++.++++.+
T Consensus 138 ~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~---g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~ 214 (244)
T 1vzw_A 138 GRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQ---GPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPA 214 (244)
T ss_dssp CSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC----------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGG
T ss_pred EcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccC---CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccC
Confidence 224532 167888999999999999999988765332 3689999999999999999999999999999999855
Q ss_pred CccEEEEehhhhhCccchhchh
Q 023070 160 GCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~~~ 181 (287)
|||+|++||+++.+||.+.++.
T Consensus 215 Gadgv~vG~al~~~~~~~~~~~ 236 (244)
T 1vzw_A 215 GVEGAIVGKALYAKAFTLEEAL 236 (244)
T ss_dssp TEEEEEECHHHHTTSSCHHHHH
T ss_pred CCceeeeeHHHHcCCCCHHHHH
Confidence 9999999999999999887654
No 46
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.60 E-value=3.3e-16 Score=137.89 Aligned_cols=152 Identities=19% Similarity=0.246 Sum_probs=32.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHh-hccCCcEE------
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLA-LNLNVPVS------ 80 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~-~~~~~pv~------ 80 (287)
..|+++.=+-.+++++.++ ++.|+|+|-| |+.++.+|+++.++.+.+. +.+-+.++
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~---l~~Gad~V~i--------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~ 141 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEA---FLRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 141 (247)
T ss_dssp CSCEEEESCCCSHHHHHHH---HHTTCSEECC--------------SHHHHHCTHHHHHHHHHHC---------------
T ss_pred CCCEEEeCCCCCHHHHHHH---HHcCCCeeeh--------------hhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 4566654444577664444 4568888865 5777889999988888773 32222333
Q ss_pred ---EEecCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q 023070 81 ---CKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQK 154 (287)
Q Consensus 81 ---vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~ 154 (287)
|+++ ||.. .+..++++.+++.|++.|.+|++++.+... .++|+.++++++.+++|||++|||.|++|+.+
T Consensus 142 ~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~---g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~ 217 (247)
T 3tdn_A 142 EFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 217 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcC---CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHH
Confidence 3443 4432 366788999999999999999987765432 36889999999999999999999999999999
Q ss_pred HHHhcCccEEEEehhhhhCccchhchh
Q 023070 155 CLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+++. |||+|++||+++.+||++.++.
T Consensus 218 ~~~~-Gad~v~vg~al~~~p~~~~~~~ 243 (247)
T 3tdn_A 218 AFLR-GADKVSINTAAVENPSLITQIA 243 (247)
T ss_dssp ---------------------------
T ss_pred HHHc-CCcHhhccHHHHcCcHHHHHHH
Confidence 9985 8999999999999999999875
No 47
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.59 E-value=1.2e-14 Score=127.85 Aligned_cols=147 Identities=20% Similarity=0.326 Sum_probs=108.4
Q ss_pred EEEEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCCh
Q 023070 11 LFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL 89 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~ 89 (287)
+|..+ .++++ |++.+ +|+.+|-..-+||......+ |.+-|.+|+.+.+| ++++++||.-|.|.|.
T Consensus 14 vimdv--~~~eq----a~iae~aGa~av~~l~~~p~d~r~~g--Gv~Rm~dp~~I~~I----~~aVsIPVm~k~righ-- 79 (291)
T 3o07_A 14 VIMDV--VTPEQ----AKIAEKSGACAVMALESIPADMRKSG--KVCRMSDPKMIKDI----MNSVSIPVMAKVRIGH-- 79 (291)
T ss_dssp EEEEE--SSHHH----HHHHHHHTCSEEEECSSCHHHHHTTT--CCCCCCCHHHHHHH----HTTCSSCEEEEEETTC--
T ss_pred eeeec--CCHHH----HHHHHHhCchhhhhccCCCchhhhcC--CccccCCHHHHHHH----HHhCCCCeEEEEecCc--
Confidence 45555 34433 55554 49999999999999866544 78889999887665 5667999999999876
Q ss_pred hhHHHHHHHHHHcCCCEEEEecc-----------------------------------------CCCC------------
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGR-----------------------------------------TRDE------------ 116 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~r-----------------------------------------t~~~------------ 116 (287)
..-++.++++|+|+|.-+.+ |...
T Consensus 80 ---~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h 156 (291)
T 3o07_A 80 ---FVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKH 156 (291)
T ss_dssp ---HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHH
T ss_pred ---HHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHH
Confidence 33366777778877755321 1000
Q ss_pred ----------cCCC-----------CccccHHHHHHHHhhCCCcE--EEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 117 ----------KDGK-----------KFRADWNAIKAVKNALRIPV--LANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 117 ----------~~~~-----------~~~~~~~~i~~i~~~~~ipV--i~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
..++ ...++|+.++++++.+++|| |+||||.|++|+.++++ +|||+||+||+++..
T Consensus 157 ~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le-~GaDGVmVGrAI~~s 235 (291)
T 3o07_A 157 IRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQ-LGCDGVFVGSGIFKS 235 (291)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHH-TTCSCEEECGGGGGS
T ss_pred HHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHH-hCCCEEEEchHHhCC
Confidence 0011 12478999999999999998 57999999999999996 799999999999874
Q ss_pred cc
Q 023070 174 PA 175 (287)
Q Consensus 174 P~ 175 (287)
|+
T Consensus 236 ~D 237 (291)
T 3o07_A 236 SN 237 (291)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 48
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.58 E-value=6.7e-14 Score=123.08 Aligned_cols=152 Identities=16% Similarity=0.211 Sum_probs=115.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhh-ccCCcEE------
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NLNVPVS------ 80 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~-~~~~pv~------ 80 (287)
+.|+++.=+=++++++.++. +.|+|+|-+ |..++.+|+.+.++.+.... .+-+.++
T Consensus 75 ~iPvi~~Ggi~~~~~~~~~~---~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g 137 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDARKLL---LSGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWRGD 137 (252)
T ss_dssp CSCEEEESSCCSHHHHHHHH---HHTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETT
T ss_pred CCCEEEECCcCCHHHHHHHH---HcCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCC
Confidence 56777655446666544444 347888866 56677889999998888742 2223333
Q ss_pred ---EEecCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q 023070 81 ---CKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQK 154 (287)
Q Consensus 81 ---vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~ 154 (287)
+++ .+|.. .++.+.++.+++.|++.|.+|++++.+... ..+|+.++++++.+++||+++|||.+++|+.+
T Consensus 138 ~~~v~~-~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~---g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~ 213 (252)
T 1ka9_F 138 FPEVHV-AGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKE---GYDLRLTRMVAEAVGVPVIASGGAGRMEHFLE 213 (252)
T ss_dssp EEEEEE-TTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCS---CCCHHHHHHHHHHCSSCEEEESCCCSHHHHHH
T ss_pred CEEEEE-CCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcC---CCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHH
Confidence 333 24542 356888999999999999999887765433 25899999999999999999999999999999
Q ss_pred HHHhcCccEEEEehhhhhCccchhchh
Q 023070 155 CLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+++ +|||+|++|++++.+||-+.++.
T Consensus 214 ~~~-~Gadgv~vgsal~~~~~~~~~~~ 239 (252)
T 1ka9_F 214 AFQ-AGAEAALAASVFHFGEIPIPKLK 239 (252)
T ss_dssp HHH-TTCSEEEESHHHHTTSSCHHHHH
T ss_pred HHH-CCCHHHHHHHHHHcCCCCHHHHH
Confidence 997 79999999999999999887664
No 49
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=6.6e-15 Score=132.85 Aligned_cols=143 Identities=22% Similarity=0.315 Sum_probs=104.8
Q ss_pred HHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCCh--------------
Q 023070 25 NAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL-------------- 89 (287)
Q Consensus 25 ~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~-------------- 89 (287)
+.|+..+ .|+++|... ||++...+...|+++|++|+.+.+|.+ ++++||+.|.|+||..
T Consensus 28 e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~Id 101 (330)
T 2yzr_A 28 EQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDMID 101 (330)
T ss_dssp HHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCEEe
Confidence 3555444 489999332 399877777779999999999988865 4689999999998721
Q ss_pred -----------h----------------hHHHHHHHHHHcCCCEEEEec--------------cC------------CCC
Q 023070 90 -----------Q----------------DTIKYAKMLEDAGCSLLAVHG--------------RT------------RDE 116 (287)
Q Consensus 90 -----------~----------------~~~~~a~~l~~~G~~~I~vh~--------------rt------------~~~ 116 (287)
. +..+.++++ +.|+++|.+|| |+ ..+
T Consensus 102 ~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~E 180 (330)
T 2yzr_A 102 ESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDEE 180 (330)
T ss_dssp EETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHHH
T ss_pred hhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHHH
Confidence 0 245666666 78888888888 44 111
Q ss_pred cCC--CCccccH-------------------------------------HHHHHHHhhCCCcE--EEecCCCCHHHHHHH
Q 023070 117 KDG--KKFRADW-------------------------------------NAIKAVKNALRIPV--LANGNVRHMEDVQKC 155 (287)
Q Consensus 117 ~~~--~~~~~~~-------------------------------------~~i~~i~~~~~ipV--i~nGgI~s~~da~~~ 155 (287)
.+. ....++| +.++++++..++|| +++|||.|++|+.++
T Consensus 181 l~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~Tpeda~~~ 260 (330)
T 2yzr_A 181 VYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVATPADAALM 260 (330)
T ss_dssp HHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHHHHHH
T ss_pred HHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCCCHHHHHHH
Confidence 100 0012344 88889998889998 699999999999999
Q ss_pred HHhcCccEEEEehhhh--hCcc
Q 023070 156 LEETGCEGVLSAESLL--ENPA 175 (287)
Q Consensus 156 l~~~gad~VmiGR~~l--~nP~ 175 (287)
++. |||+|+||++++ .||.
T Consensus 261 l~~-GaDgV~VGsaI~~a~dP~ 281 (330)
T 2yzr_A 261 MQL-GSDGVFVGSGIFKSENPL 281 (330)
T ss_dssp HHT-TCSCEEESHHHHTSSCHH
T ss_pred HHc-CcCEEeeHHHHhcCCCHH
Confidence 995 999999999999 4554
No 50
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.56 E-value=1.3e-13 Score=121.38 Aligned_cols=152 Identities=17% Similarity=0.194 Sum_probs=116.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhh-ccCCcEEE-----
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NLNVPVSC----- 81 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~-~~~~pv~v----- 81 (287)
+.|+++--+=++++++.++ ++.|+|+|-+ |+.++.+|+.+.++++.+.. .+.+.+++
T Consensus 74 ~ipvi~~ggI~~~~~~~~~---~~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g 136 (253)
T 1thf_D 74 DIPFTVGGGIHDFETASEL---ILRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 136 (253)
T ss_dssp CSCEEEESSCCSHHHHHHH---HHTTCSEEEE--------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETT
T ss_pred CCCEEEeCCCCCHHHHHHH---HHcCCCEEEE--------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCC
Confidence 5677776555777764443 3468998866 46667789999998888743 22233333
Q ss_pred ----EecCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHH
Q 023070 82 ----KIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQK 154 (287)
Q Consensus 82 ----KiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~ 154 (287)
+++ +|.. .+..++++.+++.|++.|.+|++++.+... ..+|+.++++++.+++||+++|||++++|+.+
T Consensus 137 ~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~---g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~ 212 (253)
T 1thf_D 137 EFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 212 (253)
T ss_dssp EEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHH
T ss_pred cEEEEEC-CCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCC---CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHH
Confidence 332 4432 257888999999999999999888765433 35899999999999999999999999999999
Q ss_pred HHHhcCccEEEEehhhhhCccchhchh
Q 023070 155 CLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+++ +|||+|++|++++.+|+-+.++.
T Consensus 213 ~~~-~Gadgv~vGsal~~~~~~~~~~~ 238 (253)
T 1thf_D 213 AFL-AGADAALAASVFHFREIDVRELK 238 (253)
T ss_dssp HHH-TTCSEEEESHHHHTTCSCHHHHH
T ss_pred HHH-cCChHHHHHHHHHcCCCCHHHHH
Confidence 997 79999999999999997776553
No 51
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.56 E-value=2.7e-14 Score=133.31 Aligned_cols=155 Identities=15% Similarity=0.079 Sum_probs=113.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCCEEEE--------------eccCChh---hhh--------c--Ccccccc--
Q 023070 8 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDI--------------NLGCPQR---IAR--------R--GNYGAFL-- 57 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~-~~g~d~Idi--------------N~gcP~~---~~~--------~--~~~G~~l-- 57 (287)
+.|..+||.....+...+..+.+ +.|+..+.| |.||+.+ +.. + ...+.++
T Consensus 123 ~~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~ 202 (380)
T 1p4c_A 123 DGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAA 202 (380)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHH
T ss_pred CCCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHH
Confidence 67899999854444444444433 457776654 6788532 111 1 1112222
Q ss_pred -cC---ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEE--eccCCCCcCCCCccccHHHHHH
Q 023070 58 -MD---NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFRADWNAIKA 131 (287)
Q Consensus 58 -~~---~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~v--h~rt~~~~~~~~~~~~~~~i~~ 131 (287)
+. +|++..++++++++.+++||.+|. . .+.+.++.+.++|+|.|+| ||++. ...+.++|+.+.+
T Consensus 203 ~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkg---v---~t~e~a~~a~~aGad~I~vs~~gg~~----~d~~~~~~~~l~~ 272 (380)
T 1p4c_A 203 LMSRQMDASFNWEALRWLRDLWPHKLLVKG---L---LSAEDADRCIAEGADGVILSNHGGRQ----LDCAISPMEVLAQ 272 (380)
T ss_dssp HTSSCCCTTCCHHHHHHHHHHCCSEEEEEE---E---CCHHHHHHHHHTTCSEEEECCGGGTS----CTTCCCGGGTHHH
T ss_pred HHHhhcCccccHHHHHHHHHhcCCCEEEEe---c---CcHHHHHHHHHcCCCEEEEcCCCCCc----CCCCcCHHHHHHH
Confidence 22 677788999999999999999994 1 2356788999999999999 66542 1223578999999
Q ss_pred HHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 132 VKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 132 i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
+++.+++|||++|||++++|+.+++. .|||+||+||+++..
T Consensus 273 v~~~~~~pVia~GGI~~~~dv~kal~-~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 273 SVAKTGKPVLIDSGFRRGSDIVKALA-LGAEAVLLGRATLYG 313 (380)
T ss_dssp HHHHHCSCEEECSSCCSHHHHHHHHH-TTCSCEEESHHHHHH
T ss_pred HHHHcCCeEEEECCCCCHHHHHHHHH-hCCcHhhehHHHHHH
Confidence 99988899999999999999999998 699999999999853
No 52
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.55 E-value=3.2e-14 Score=124.58 Aligned_cols=151 Identities=13% Similarity=0.126 Sum_probs=111.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEE-----Ee
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC-----KI 83 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~v-----Ki 83 (287)
.|+++.=+=++++++.+ +++.|+|+|-+ |+.++.+|+++.++ +...+.+-+.+++ ++
T Consensus 74 ipvi~~Ggi~~~~~~~~---~~~~Gad~V~l--------------g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~ 135 (241)
T 1qo2_A 74 EHIQIGGGIRSLDYAEK---LRKLGYRRQIV--------------SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF 135 (241)
T ss_dssp GGEEEESSCCSHHHHHH---HHHTTCCEEEE--------------CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC
T ss_pred CcEEEECCCCCHHHHHH---HHHCCCCEEEE--------------CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE
Confidence 45444333345555444 34468998854 56778889988888 7664332223333 33
Q ss_pred cCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc-
Q 023070 84 RVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET- 159 (287)
Q Consensus 84 R~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~- 159 (287)
.||.. .++.++++.+++.|++.|.+|++++.+... ..||+.++++++.+++|||++|||++++|+.++++.+
T Consensus 136 -~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~---g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~ 211 (241)
T 1qo2_A 136 -KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQ---EHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHT 211 (241)
T ss_dssp -TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTC---CCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHH
T ss_pred -CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCC---cCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhccc
Confidence 25542 257788999999999999999988765433 2589999999999999999999999999999999865
Q ss_pred ---C-ccEEEEehhhhhCccchhchh
Q 023070 160 ---G-CEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 160 ---g-ad~VmiGR~~l~nP~lf~~~~ 181 (287)
| ||+|++|++++..+.-+.++.
T Consensus 212 ~~~G~adgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 212 ETNGLLKGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp HTTTSEEEEEECHHHHTTSSCHHHHH
T ss_pred ccCCeEeEEEeeHHHHcCCCCHHHHH
Confidence 9 999999999999988766553
No 53
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.54 E-value=5.4e-14 Score=129.30 Aligned_cols=142 Identities=17% Similarity=0.165 Sum_probs=109.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCC--CCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPY--CDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g--~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR 84 (287)
..|+.+|+ |.+++.+..+..+++.| ++.|++|++. | ++....++++.+++.++ .||... .
T Consensus 94 g~~v~v~~-g~~~~~~~~a~~~~~~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G-~ 156 (336)
T 1ypf_A 94 GLIASISV-GVKEDEYEFVQQLAAEHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAG-N 156 (336)
T ss_dssp TCCCEEEE-CCSHHHHHHHHHHHHTTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEE-E
T ss_pred CCeEEEeC-CCCHHHHHHHHHHHhcCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEEC-C
Confidence 45889995 88888887776677778 9999999741 2 67788899999999885 555432 0
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEE--eccCCCC-c-CCCCccc--cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDE-K-DGKKFRA--DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~v--h~rt~~~-~-~~~~~~~--~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~ 158 (287)
-.+.+.|+.+.++|+|+|++ |+++... . ..+.+.+ .++.+.++++.+++|||++|||+++.|+.+++.
T Consensus 157 -----v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kala- 230 (336)
T 1ypf_A 157 -----VGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIR- 230 (336)
T ss_dssp -----ECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHH-
T ss_pred -----cCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHH-
Confidence 12246789999999999999 5543110 0 0111123 688899999999999999999999999999998
Q ss_pred cCccEEEEehhhhh
Q 023070 159 TGCEGVLSAESLLE 172 (287)
Q Consensus 159 ~gad~VmiGR~~l~ 172 (287)
.|||+||+||+++.
T Consensus 231 lGAdaV~iGr~~l~ 244 (336)
T 1ypf_A 231 FGATMVMIGSLFAG 244 (336)
T ss_dssp TTCSEEEESGGGTT
T ss_pred cCCCEEEeChhhhc
Confidence 69999999999995
No 54
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.53 E-value=1.3e-13 Score=122.35 Aligned_cols=152 Identities=15% Similarity=0.162 Sum_probs=102.7
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCccccccc-C--ChHHHHHHHHHHh---hcc--CCcE
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLM-D--NLPLVKSLVEKLA---LNL--NVPV 79 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~-~--~~~~~~~iv~~v~---~~~--~~pv 79 (287)
+.|+++.=+-++++++.++. +.|+|+|-+. +.++ . +|+.+.++++... +.+ .+++
T Consensus 74 ~iPvi~~ggi~~~~~i~~~~---~~Gad~v~lg--------------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~ 136 (266)
T 2w6r_A 74 TLPIIASGGAGKMEHFLEAF---LAGADKALAA--------------SVFHFREIDMRELKEYLKKHGGSGQAVVVAIDA 136 (266)
T ss_dssp CSCEEEESCCCSTHHHHHHH---HHTCSEEECC--------------CCC------CHHHHHHCC----CCCEEEEEEEE
T ss_pred CCCEEEECCCCCHHHHHHHH---HcCCcHhhhh--------------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEE
Confidence 56777754446777765554 3588888763 4445 4 7888888776654 121 2222
Q ss_pred -------EEEecCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCH
Q 023070 80 -------SCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHM 149 (287)
Q Consensus 80 -------~vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~ 149 (287)
.|+++ +|.. .+..++++.+++.|++.|.+|++++.+... ..+|+.++++++.+++|||++|||+++
T Consensus 137 ~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~---g~~~~~i~~l~~~~~ipvia~GGI~~~ 212 (266)
T 2w6r_A 137 KRVDGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKM 212 (266)
T ss_dssp EEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCS---CCCHHHHHHHGGGCCSCEEEESCCCSH
T ss_pred EecCCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcC---CCCHHHHHHHHHHcCCCEEEeCCCCCH
Confidence 34443 4432 256788999999999999999988765433 358999999999999999999999999
Q ss_pred HHHHHHHHhcCccEEEEehhhhhCccchhchh
Q 023070 150 EDVQKCLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 150 ~da~~~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+|+.++++ +|||+|++|++++.+|+.+.++.
T Consensus 213 ed~~~~~~-~Gadgv~vgsal~~~~~~~~~~~ 243 (266)
T 2w6r_A 213 EHFLEAFL-AGADAALAASVFHFREIDMRELK 243 (266)
T ss_dssp HHHHHHHH-HTCSEEEESTTTC----------
T ss_pred HHHHHHHH-cCCHHHHccHHHHcCCCCHHHHH
Confidence 99999997 79999999999999999888765
No 55
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.52 E-value=9.5e-14 Score=128.92 Aligned_cols=153 Identities=18% Similarity=0.175 Sum_probs=107.1
Q ss_pred CCCEE-----EEecC-CCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChH-HHHHHHHHHhhccCCcEE
Q 023070 8 DRPLF-----VQFCA-NDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLP-LVKSLVEKLALNLNVPVS 80 (287)
Q Consensus 8 ~~p~~-----~Qi~g-~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~-~~~~iv~~v~~~~~~pv~ 80 (287)
+.|++ +|+.+ .+++.+.++++.+++++..|+||. ...+.... |. .+.. ...+.++.+++.+++||.
T Consensus 119 ~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~---~~~~~~p~-g~---~~~~~~~~~~i~~i~~~~~vPVi 191 (368)
T 3vkj_A 119 TIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNP---AQEVFQPE-GE---PEYQIYALEKLRDISKELSVPII 191 (368)
T ss_dssp SSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCH---HHHHHSSS-CC---CBCBTHHHHHHHHHHTTCSSCEE
T ss_pred CcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecc---hhhhhCCC-CC---chhhHHHHHHHHHHHHHcCCCEE
Confidence 34665 45555 889999999998876766777773 32222211 11 1222 367889999999999999
Q ss_pred EEecCCCChhhHHHHHHHHHHcCCCEEEEe--ccC--------CCCc-----------CCCCccccHHHHHHHHhhC-CC
Q 023070 81 CKIRVFPNLQDTIKYAKMLEDAGCSLLAVH--GRT--------RDEK-----------DGKKFRADWNAIKAVKNAL-RI 138 (287)
Q Consensus 81 vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh--~rt--------~~~~-----------~~~~~~~~~~~i~~i~~~~-~i 138 (287)
+|. .|+.. +.+.|+.+.++|+++|+|. |+| +... ...-+.+....+.++++.+ ++
T Consensus 192 vK~-vG~g~--s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~i 268 (368)
T 3vkj_A 192 VKE-SGNGI--SMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDS 268 (368)
T ss_dssp EEC-SSSCC--CHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTC
T ss_pred EEe-CCCCC--CHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCC
Confidence 996 54432 2467899999999999994 443 1100 0000122335677888777 49
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
|||++|||+++.|+.+++. .|||+||+||+++
T Consensus 269 pvia~GGI~~~~d~~kal~-lGA~~v~ig~~~l 300 (368)
T 3vkj_A 269 FLVGSGGIRSGLDAAKAIA-LGADIAGMALPVL 300 (368)
T ss_dssp EEEEESSCCSHHHHHHHHH-HTCSEEEECHHHH
T ss_pred cEEEECCCCCHHHHHHHHH-cCCCEEEEcHHHH
Confidence 9999999999999999999 5999999999765
No 56
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.50 E-value=4.1e-13 Score=117.27 Aligned_cols=152 Identities=22% Similarity=0.235 Sum_probs=115.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhh-cc----CC-----
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NL----NV----- 77 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~-~~----~~----- 77 (287)
+.|+++.-+-.+++++.++ ++.|+|+|.++. .++.+|+.+.++.+.... .+ +.
T Consensus 77 ~ipvi~~g~i~~~~~~~~~---~~~Gad~V~i~~--------------~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g 139 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDATTL---FRAGADKVSVNT--------------AAVRNPQLVALLAREFGSQSTVVAIDAKWNGE 139 (253)
T ss_dssp SSCEEEESSCCSHHHHHHH---HHHTCSEEEESH--------------HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSS
T ss_pred CCCEEEECCCCCHHHHHHH---HHcCCCEEEECh--------------HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCC
Confidence 4688777666788775443 345899999972 345678888888777542 11 22
Q ss_pred cEEEEecCCCC--hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q 023070 78 PVSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 78 pv~vKiR~g~~--~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~ 155 (287)
++.++++.++. ..+..++++.+.+.|+++|.+|+++..+... ..+++.++++++.+++||+++|||++++++.++
T Consensus 140 ~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~---~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~ 216 (253)
T 1h5y_A 140 YYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGL---GYDVELIRRVADSVRIPVIASGGAGRVEHFYEA 216 (253)
T ss_dssp SEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCS---CCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHH
T ss_pred cEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcC---cCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHH
Confidence 15777776542 2356788999999999999999988765432 358999999999999999999999999999999
Q ss_pred HHhcCccEEEEehhhhhCccchhch
Q 023070 156 LEETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 156 l~~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
++ .|||+|++|++++.+++-+.++
T Consensus 217 ~~-~Ga~~v~vgsal~~~~~~~~~~ 240 (253)
T 1h5y_A 217 AA-AGADAVLAASLFHFRVLSIAQV 240 (253)
T ss_dssp HH-TTCSEEEESHHHHTTSSCHHHH
T ss_pred HH-cCCcHHHHHHHHHcCCCCHHHH
Confidence 97 7999999999999887655443
No 57
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.50 E-value=3.9e-13 Score=123.01 Aligned_cols=138 Identities=18% Similarity=0.223 Sum_probs=106.0
Q ss_pred CCCEEEEecCC----CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE
Q 023070 8 DRPLFVQFCAN----DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK 82 (287)
Q Consensus 8 ~~p~~~Qi~g~----~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK 82 (287)
+.|+.++++.+ +++ +.+.++ +++.|+|+|.+|+|||. ++++.+++. ++++..+
T Consensus 67 ~~p~~v~l~v~~~~~~~~-~~~~~~~~~~~g~d~V~~~~g~p~--------------------~~~~~l~~~-gi~vi~~ 124 (328)
T 2gjl_A 67 DRPFGVNLTLLPTQKPVP-YAEYRAAIIEAGIRVVETAGNDPG--------------------EHIAEFRRH-GVKVIHK 124 (328)
T ss_dssp SSCCEEEEEECCCSSCCC-HHHHHHHHHHTTCCEEEEEESCCH--------------------HHHHHHHHT-TCEEEEE
T ss_pred CCCeEEEEeccccccCcc-HHHHHHHHHhcCCCEEEEcCCCcH--------------------HHHHHHHHc-CCCEEee
Confidence 46899999997 343 444444 45679999999998872 234455544 7888877
Q ss_pred ecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
+. +.+.++.+.+.|+|+|.+++++..+..+.....+|+.++++++.+++||+++|||.+++++.+++. .|||
T Consensus 125 v~-------t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~-~GAd 196 (328)
T 2gjl_A 125 CT-------AVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALA-LGAD 196 (328)
T ss_dssp ES-------SHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHH-HTCS
T ss_pred CC-------CHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH-cCCC
Confidence 52 234567788999999999987653221111236899999999989999999999999999999998 5999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+|++||+++..|.
T Consensus 197 gV~vGs~~~~~~e 209 (328)
T 2gjl_A 197 AINMGTRFLATRE 209 (328)
T ss_dssp EEEESHHHHTSSS
T ss_pred EEEECHHHHcCcc
Confidence 9999999999988
No 58
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.49 E-value=4.6e-13 Score=122.60 Aligned_cols=138 Identities=19% Similarity=0.242 Sum_probs=106.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+.++++..+|+.-..+..+++.|+|.|.+|+|||.. +++.+++ .+++|.+++.
T Consensus 77 ~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~p~~--------------------~~~~l~~-~g~~v~~~v~--- 132 (326)
T 3bo9_A 77 DKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGNPTK--------------------YIRELKE-NGTKVIPVVA--- 132 (326)
T ss_dssp SSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSCCHH--------------------HHHHHHH-TTCEEEEEES---
T ss_pred CCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCCcHH--------------------HHHHHHH-cCCcEEEEcC---
Confidence 579999999976643222223456799999999998842 2333433 3788888762
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
..+.++.+.+.|+|+|.++++...+..+ ...+|+.+.++++.+++||+++|||.|++++.+++. .|||+|++|
T Consensus 133 ----s~~~a~~a~~~GaD~i~v~g~~~GG~~G--~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~-~GA~gV~vG 205 (326)
T 3bo9_A 133 ----SDSLARMVERAGADAVIAEGMESGGHIG--EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFA-LGAEAVQMG 205 (326)
T ss_dssp ----SHHHHHHHHHTTCSCEEEECTTSSEECC--SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHH-HTCSEEEES
T ss_pred ----CHHHHHHHHHcCCCEEEEECCCCCccCC--CccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHH-hCCCEEEec
Confidence 2455778889999999999876443212 146899999999989999999999999999999998 699999999
Q ss_pred hhhhhCccc
Q 023070 168 ESLLENPAL 176 (287)
Q Consensus 168 R~~l~nP~l 176 (287)
++++..+..
T Consensus 206 s~~~~~~e~ 214 (326)
T 3bo9_A 206 TRFVASVES 214 (326)
T ss_dssp HHHHTBSSC
T ss_pred hHHHcCccc
Confidence 999988874
No 59
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.47 E-value=2.9e-13 Score=127.41 Aligned_cols=145 Identities=19% Similarity=0.161 Sum_probs=107.8
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCC
Q 023070 10 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPN 88 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~ 88 (287)
++++.+.. +++....+..+++.|+|.|+||+++ | +++.+.++++.+++.+ ++||.++.
T Consensus 143 ~~~~~i~~-~~~~~~~a~~~~~~G~d~i~i~~~~----------g-----~~~~~~e~i~~ir~~~~~~pviv~~----- 201 (404)
T 1eep_A 143 RVGAAVSI-DIDTIERVEELVKAHVDILVIDSAH----------G-----HSTRIIELIKKIKTKYPNLDLIAGN----- 201 (404)
T ss_dssp CCEEEECS-CTTHHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTCEEEEEE-----
T ss_pred eEEEEeCC-ChhHHHHHHHHHHCCCCEEEEeCCC----------C-----ChHHHHHHHHHHHHHCCCCeEEEcC-----
Confidence 46777765 3445555555677899999999653 1 4688899999999888 89999852
Q ss_pred hhhHHHHHHHHHHcCCCEEEEec------cCCCCcCCCCccccHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHG------RTRDEKDGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~------rt~~~~~~~~~~~~~~~i~~i~~---~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
-.+.+.++.++++|+|+|+|.. ++... ...+.++++.+..+++ ..++|||++|||++++|+.+++. .
T Consensus 202 -v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~--~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala-~ 277 (404)
T 1eep_A 202 -IVTKEAALDLISVGADCLKVGIGPGSICTTRIV--AGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA-A 277 (404)
T ss_dssp -ECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHH--HCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHH-H
T ss_pred -CCcHHHHHHHHhcCCCEEEECCCCCcCcCcccc--CCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHH-c
Confidence 1224678889999999999921 11100 0112346666666665 56899999999999999999998 5
Q ss_pred CccEEEEehhhhhCccchhc
Q 023070 160 GCEGVLSAESLLENPALFAG 179 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~ 179 (287)
|||+|++||+++..|+....
T Consensus 278 GAd~V~iG~~~l~~~e~~~~ 297 (404)
T 1eep_A 278 GADSVMIGNLFAGTKESPSE 297 (404)
T ss_dssp TCSEEEECHHHHTBTTSSSC
T ss_pred CCCHHhhCHHHhcCCCCCcc
Confidence 99999999999999887643
No 60
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.47 E-value=6.9e-13 Score=122.80 Aligned_cols=154 Identities=19% Similarity=0.217 Sum_probs=102.7
Q ss_pred CCCEEEEecCCCH-HHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 8 DRPLFVQFCANDP-EILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 8 ~~p~~~Qi~g~~~-~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
+.|++.+|....+ +++.++++.+ ++|++.||+...+......+ ..+.+-+.+.++.+++.+++||.+|. .|
T Consensus 144 ~~~~ianig~~~~~e~~~~~ve~~--~adal~ihln~~qe~~~p~G-----d~~~~~~~~~I~~l~~~~~~PVivK~-vg 215 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQAGLQAVRDL--QPLFLQVHINLMQELLMPEG-----EREFRSWKKHLSDYAKKLQLPFILKE-VG 215 (365)
T ss_dssp -CCEEEEEETTSCHHHHHHHHHHH--CCSCEEEEECHHHHHTSSSS-----CCCCHHHHHHHHHHHHHCCSCEEEEE-CS
T ss_pred CCcEEEEeCCCCCHHHHHHHHHhc--CCCEEEEeccccccccCCCC-----CCcHHHHHHHHHHHHHhhCCCEEEEE-CC
Confidence 6788889876543 3344444333 67777777654444333322 23455577899999999999999994 33
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCc-----C---C-----CCccccHHHHHHHHhhC-CCcEEEecCCCCHHHH
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEK-----D---G-----KKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDV 152 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~-----~---~-----~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da 152 (287)
+. ...+.++.+.++|+|+|+|+++..... . . ..+.+....+..++... ++|||++|||+++.|+
T Consensus 216 ~g--~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv 293 (365)
T 3sr7_A 216 FG--MDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDI 293 (365)
T ss_dssp SC--CCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHH
T ss_pred CC--CCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHH
Confidence 32 234668889999999999965522110 0 0 11123335666664432 7999999999999999
Q ss_pred HHHHHhcCccEEEEehhhhh
Q 023070 153 QKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~ 172 (287)
.++|. .|||+||+||+++.
T Consensus 294 ~KaLa-lGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 294 IKALV-LGAKAVGLSRTMLE 312 (365)
T ss_dssp HHHHH-HTCSEEEESHHHHH
T ss_pred HHHHH-cCCCEEEECHHHHH
Confidence 99998 69999999997653
No 61
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.46 E-value=3.1e-13 Score=124.25 Aligned_cols=158 Identities=18% Similarity=0.172 Sum_probs=114.8
Q ss_pred CCCEEEEecCC-CHHHHHHHHHHHc-CCCCEEEEeccCChh-hh----hcC----------cc--------ccc---ccC
Q 023070 8 DRPLFVQFCAN-DPEILLNAARRVE-PYCDYVDINLGCPQR-IA----RRG----------NY--------GAF---LMD 59 (287)
Q Consensus 8 ~~p~~~Qi~g~-~~~~~~~aA~~~~-~g~d~IdiN~gcP~~-~~----~~~----------~~--------G~~---l~~ 59 (287)
+.|...||.-. |.+...+..+.++ .||.+|=+..-.|.. +. +.+ .+ ++. -.-
T Consensus 121 ~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T 3sgz_A 121 EGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFP 200 (352)
T ss_dssp TCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CC
T ss_pred CccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhcc
Confidence 46789998654 5555555556665 599888887666652 11 000 00 111 123
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--C
Q 023070 60 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--R 137 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ 137 (287)
+|.+..+.++.+++.+++||.+|... ..+.++.+.++|+|+|+|++....+. ..+++.++.+.++++.+ +
T Consensus 201 d~~~~w~~i~~lr~~~~~PvivK~v~------~~e~A~~a~~~GaD~I~vsn~GG~~~--d~~~~~~~~L~~i~~av~~~ 272 (352)
T 3sgz_A 201 KASFCWNDLSLLQSITRLPIILKGIL------TKEDAELAMKHNVQGIVVSNHGGRQL--DEVSASIDALREVVAAVKGK 272 (352)
T ss_dssp CTTCCHHHHHHHHHHCCSCEEEEEEC------SHHHHHHHHHTTCSEEEECCGGGTSS--CSSCCHHHHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEecC------cHHHHHHHHHcCCCEEEEeCCCCCcc--CCCccHHHHHHHHHHHhCCC
Confidence 56777788999999999999999753 24668899999999999965433222 23467899999998877 7
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 138 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 138 ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
+|||++|||++..|+.++|. .|||+||+||+++..+
T Consensus 273 ipVia~GGI~~g~Dv~kaLa-lGA~aV~iGr~~l~~l 308 (352)
T 3sgz_A 273 IEVYMDGGVRTGTDVLKALA-LGARCIFLGRPILWGL 308 (352)
T ss_dssp SEEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHH-cCCCEEEECHHHHHHH
Confidence 99999999999999999998 6999999999877443
No 62
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.44 E-value=3.3e-12 Score=119.29 Aligned_cols=148 Identities=11% Similarity=0.085 Sum_probs=127.6
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecC
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 85 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~ 85 (287)
..|+...+.+.+++.|.++|+ ..+.||+.|+||+|| +++...+++++|++++ ++++.++.+.
T Consensus 136 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~ 199 (384)
T 2pgw_A 136 AVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANE 199 (384)
T ss_dssp EEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTT
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCC
Confidence 345556666789999999887 456799999999875 6788899999999988 6899999999
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+|+.++++++++.+++.|+++|. +.. .+.+|+.++++++.+++||++++.+.+++++.++++.+.||.|+
T Consensus 200 ~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ 269 (384)
T 2pgw_A 200 GWSVHDAINMCRKLEKYDIEFIE-------QPT---VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMIC 269 (384)
T ss_dssp CCCHHHHHHHHHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEe-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 99999999999999999999885 211 14689999999999999999999999999999999988899999
Q ss_pred EehhhhhCccchhchh
Q 023070 166 SAESLLENPALFAGFR 181 (287)
Q Consensus 166 iGR~~l~nP~lf~~~~ 181 (287)
+..+.++.++-+.++.
T Consensus 270 ik~~~~GGit~~~~i~ 285 (384)
T 2pgw_A 270 IGPREIGGIQPMMKAA 285 (384)
T ss_dssp ECHHHHTSHHHHHHHH
T ss_pred EcchhhCCHHHHHHHH
Confidence 9999999998766553
No 63
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.43 E-value=1.3e-12 Score=126.57 Aligned_cols=142 Identities=17% Similarity=0.168 Sum_probs=107.9
Q ss_pred CCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHH
Q 023070 17 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 17 g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+++.+.++..+++.|+|+|+||.+|. +++...++++++++.+ ++||.+|- -.+.+.
T Consensus 251 G~~~~~~~~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~------v~t~~~ 309 (514)
T 1jcn_A 251 GTREDDKYRLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGN------VVTAAQ 309 (514)
T ss_dssp CSSTTHHHHHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEE------ECSHHH
T ss_pred cCchhhHHHHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEecc------cchHHH
Confidence 5556666677667788999999998652 3467788999999888 89999861 123566
Q ss_pred HHHHHHcCCCEEEEe---ccC---CCCc-CCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 96 AKMLEDAGCSLLAVH---GRT---RDEK-DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 96 a~~l~~~G~~~I~vh---~rt---~~~~-~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
++.+.++|+|+|.|. |.+ +... .+.+....+..+.++++.+++|||++|||+++.|+.+++. .|||+||+||
T Consensus 310 a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala-~GAd~V~iG~ 388 (514)
T 1jcn_A 310 AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALA-LGASTVMMGS 388 (514)
T ss_dssp HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH-TTCSEEEEST
T ss_pred HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHH-cCCCeeeECH
Confidence 889999999999982 111 1110 0111234577888888888999999999999999999999 5999999999
Q ss_pred hhhhCccchhch
Q 023070 169 SLLENPALFAGF 180 (287)
Q Consensus 169 ~~l~nP~lf~~~ 180 (287)
+++..|+.....
T Consensus 389 ~~l~~~e~~~~~ 400 (514)
T 1jcn_A 389 LLAATTEAPGEY 400 (514)
T ss_dssp TTTTSTTSSCC-
T ss_pred HHHcCCcCCcce
Confidence 999999866543
No 64
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.41 E-value=5e-12 Score=117.54 Aligned_cols=127 Identities=17% Similarity=0.241 Sum_probs=94.0
Q ss_pred HHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHc
Q 023070 24 LNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDA 102 (287)
Q Consensus 24 ~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~ 102 (287)
.+.++ +++.|+|.|.+|+|||. .++++.+++ .+++|.+++. +.+.++.+++.
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~-------------------~~~i~~~~~-~g~~v~~~v~-------t~~~a~~a~~~ 164 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPD-------------------REVIARLRR-AGTLTLVTAT-------TPEEARAVEAA 164 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCC-------------------HHHHHHHHH-TTCEEEEEES-------SHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCc-------------------HHHHHHHHH-CCCeEEEECC-------CHHHHHHHHHc
Confidence 34444 34568999999999874 123444444 3788888762 23457788899
Q ss_pred CCCEEEEeccCCCCcCCC----C---c--cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 103 GCSLLAVHGRTRDEKDGK----K---F--RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 103 G~~~I~vh~rt~~~~~~~----~---~--~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
|+|+|.++++...+..+. . + ...|+.++++++.+++||++.|||.+++++.+++. .|||+|++||+++.+
T Consensus 165 GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~-~GAd~V~vGs~~~~~ 243 (369)
T 3bw2_A 165 GADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLA-AGADAAQLGTAFLAT 243 (369)
T ss_dssp TCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHTS
T ss_pred CCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhCC
Confidence 999999987543211000 0 0 12389999999989999999999999999999998 599999999999999
Q ss_pred ccchh
Q 023070 174 PALFA 178 (287)
Q Consensus 174 P~lf~ 178 (287)
|+...
T Consensus 244 ~e~~~ 248 (369)
T 3bw2_A 244 DESGA 248 (369)
T ss_dssp TTCCC
T ss_pred cccCc
Confidence 98753
No 65
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.38 E-value=1.4e-12 Score=125.71 Aligned_cols=143 Identities=20% Similarity=0.136 Sum_probs=106.4
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCC
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFP 87 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~ 87 (287)
+..+..-.|..++.+..+..++++|+|.|.||..|| +.+.+.++++.+++.. ++||.++-
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g---------------~~~~~~~~i~~ir~~~p~~~Vi~g~---- 279 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGGN---- 279 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCCEEEEE----
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccc---------------cchHHHHHHHHHHHHCCCceEEEcc----
Confidence 333334456666777777778889999999998876 3456778899998887 78998852
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEecc------CCCCcCCCCccccHHHHHHHHhh---CCCcEEEecCCCCHHHHHHHHHh
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGR------TRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~r------t~~~~~~~~~~~~~~~i~~i~~~---~~ipVi~nGgI~s~~da~~~l~~ 158 (287)
-.+.+.++.+.++|+|+|.|.+. ++.. .+.+.+++..+.++.+. .++|||++|||.+++|+.+++.
T Consensus 280 --v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~--~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala- 354 (496)
T 4fxs_A 280 --VATAEGARALIEAGVSAVKVGIGPGSICTTRIV--TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIA- 354 (496)
T ss_dssp --ECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHH--HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH-
T ss_pred --cCcHHHHHHHHHhCCCEEEECCCCCcCcccccc--cCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHH-
Confidence 12245688899999999998421 1111 11234677777777764 4799999999999999999998
Q ss_pred cCccEEEEehhhhhCcc
Q 023070 159 TGCEGVLSAESLLENPA 175 (287)
Q Consensus 159 ~gad~VmiGR~~l~nP~ 175 (287)
.|||+||+||+++.-..
T Consensus 355 ~GAd~V~iGs~f~~t~E 371 (496)
T 4fxs_A 355 AGASCVMVGSMFAGTEE 371 (496)
T ss_dssp TTCSEEEESTTTTTBTT
T ss_pred cCCCeEEecHHHhcCCC
Confidence 59999999999876443
No 66
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.37 E-value=2.4e-12 Score=113.06 Aligned_cols=100 Identities=18% Similarity=0.221 Sum_probs=85.4
Q ss_pred EEEEecCCCCh--hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHH
Q 023070 79 VSCKIRVFPNL--QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 156 (287)
Q Consensus 79 v~vKiR~g~~~--~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l 156 (287)
..||+|.++.. .++.++++.+++.|+++|+++..+...... ..+++.++++++.+++||+++|||+|++++.+++
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~---~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l 98 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF 98 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTCSS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccCCC---cccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH
Confidence 56788855432 378999999999999999999877653222 4789999999999999999999999999999999
Q ss_pred HhcCccEEEEehhhhhCccchhchhh
Q 023070 157 EETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 157 ~~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+ .|||+|++||+++.||+++.++..
T Consensus 99 ~-~Gad~V~ig~~~l~dp~~~~~~~~ 123 (247)
T 3tdn_A 99 L-RGADKVSINTAAVENPSLITQIAQ 123 (247)
T ss_dssp H-TTCSEECCSHHHHHCTHHHHHHHH
T ss_pred H-cCCCeeehhhHHhhChHHHHHHHH
Confidence 7 589999999999999999887754
No 67
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.36 E-value=7.8e-12 Score=107.88 Aligned_cols=160 Identities=17% Similarity=0.190 Sum_probs=109.5
Q ss_pred CEEEEecCC----CHHHHHHHHHHH-cCCCCEEEEe-----------ccCChhhh-hcC-------------------cc
Q 023070 10 PLFVQFCAN----DPEILLNAARRV-EPYCDYVDIN-----------LGCPQRIA-RRG-------------------NY 53 (287)
Q Consensus 10 p~~~Qi~g~----~~~~~~~aA~~~-~~g~d~IdiN-----------~gcP~~~~-~~~-------------------~~ 53 (287)
-+++|+.++ +++...+.|+.+ +.|+++|.++ .++|.-.. +++ ..
T Consensus 8 ~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 8 IVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp EEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 367899999 888888888865 4599999887 45776211 111 11
Q ss_pred cccc-------cCCh-HHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEe--ccCCCCcCCCCc
Q 023070 54 GAFL-------MDNL-PLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVH--GRTRDEKDGKKF 122 (287)
Q Consensus 54 G~~l-------~~~~-~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh--~rt~~~~~~~~~ 122 (287)
|+.. ..+| ..+.++++.+++.. +.++.+.+. + .+.++.+++.|+++|.+. +.+.........
T Consensus 88 Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~---t----~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~ 160 (223)
T 1y0e_A 88 QCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA---T----VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLY 160 (223)
T ss_dssp TCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS---S----HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTT
T ss_pred CCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC---C----HHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCC
Confidence 2211 1133 34567777777655 667766542 2 223566889999999763 343322211112
Q ss_pred cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 123 RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 123 ~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
..+++.++++++.+++||+++|||+|++++.++++ .|||+|++||+++. |+...
T Consensus 161 ~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~-~Gad~v~vG~al~~-p~~~~ 214 (223)
T 1y0e_A 161 QNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMD-LGVHCSVVGGAITR-PKEIT 214 (223)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHC-HHHHH
T ss_pred cccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHH-cCCCEEEEChHHcC-cHHHH
Confidence 45788999999999999999999999999999998 59999999999765 76543
No 68
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.35 E-value=5e-12 Score=121.69 Aligned_cols=136 Identities=21% Similarity=0.168 Sum_probs=104.3
Q ss_pred cCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHH
Q 023070 16 CANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 16 ~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 94 (287)
.|..++.+.++..++++|+|.|.||..|+. +..+.++++.+++.. ++||.++- -.+.+
T Consensus 224 vG~~~~~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~------v~t~e 282 (490)
T 4avf_A 224 VGTGADTGERVAALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGN------IATAE 282 (490)
T ss_dssp ECSSTTHHHHHHHHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEE------ECSHH
T ss_pred eccccchHHHHHHHhhcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEee------eCcHH
Confidence 355667777777788899999999987753 456778889998887 78998862 12245
Q ss_pred HHHHHHHcCCCEEEEec------cCCCCcCCCCccccHHHHHHHHhh---CCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 95 YAKMLEDAGCSLLAVHG------RTRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~------rt~~~~~~~~~~~~~~~i~~i~~~---~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
.++.+.++|+|+|.|.. .++.. .+.+.+++..+.++++. .++|||++|||.+++|+.+++. .|||+||
T Consensus 283 ~a~~l~~aGaD~I~vg~g~Gs~~~t~~~--~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~-~GAd~V~ 359 (490)
T 4avf_A 283 AAKALAEAGADAVKVGIGPGSICTTRIV--AGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMV-AGAYCVM 359 (490)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCHHHHH--TCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHH-HTCSEEE
T ss_pred HHHHHHHcCCCEEEECCCCCcCCCcccc--CCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHH-cCCCeee
Confidence 68889999999999831 11110 12234678888888774 4799999999999999999998 5999999
Q ss_pred EehhhhhCcc
Q 023070 166 SAESLLENPA 175 (287)
Q Consensus 166 iGR~~l~nP~ 175 (287)
+|++++.-+.
T Consensus 360 vGs~~~~~~E 369 (490)
T 4avf_A 360 MGSMFAGTEE 369 (490)
T ss_dssp ECTTTTTBTT
T ss_pred ecHHHhcCCC
Confidence 9999987554
No 69
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.34 E-value=1.5e-11 Score=109.47 Aligned_cols=151 Identities=14% Similarity=0.215 Sum_probs=106.0
Q ss_pred CCCCEEEEecCCC-----HHH---HHHHHHHHcCCCCEE--EEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccC
Q 023070 7 EDRPLFVQFCAND-----PEI---LLNAARRVEPYCDYV--DINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN 76 (287)
Q Consensus 7 ~~~p~~~Qi~g~~-----~~~---~~~aA~~~~~g~d~I--diN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~ 76 (287)
.+.|+++|+.+.. +.. ..++.+.++.|+|.| .+|.+|+.. ..+ .+.+.++++..+ ..+
T Consensus 78 ~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~--------~~~---~~~~~~v~~~~~-~~g 145 (273)
T 2qjg_A 78 KDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDED--------WEA---YRDLGMIAETCE-YWG 145 (273)
T ss_dssp CCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEETSTTH--------HHH---HHHHHHHHHHHH-HHT
T ss_pred CCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecCCCCH--------HHH---HHHHHHHHHHHH-HcC
Confidence 4678999998765 211 333444567899999 788887621 111 133444554443 247
Q ss_pred CcEEEEec-------CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCC-
Q 023070 77 VPVSCKIR-------VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRH- 148 (287)
Q Consensus 77 ~pv~vKiR-------~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s- 148 (287)
+|+.+.+- .+++..+..+.++.+++.|+|+|.++. +.+|+.++++++.+++||+++|||.+
T Consensus 146 ~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~-----------~~~~~~l~~i~~~~~ipvva~GGi~~~ 214 (273)
T 2qjg_A 146 MPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY-----------TGDIDSFRDVVKGCPAPVVVAGGPKTN 214 (273)
T ss_dssp CCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC-----------CSSHHHHHHHHHHCSSCEEEECCSCCS
T ss_pred CCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC-----------CCCHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 88888752 123444555666889999999998872 25789999999989999999999995
Q ss_pred -HHHHHHHHH---hcCccEEEEehhhhhCccchhch
Q 023070 149 -MEDVQKCLE---ETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 149 -~~da~~~l~---~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
.+|+.+.+. ..||++|++||+++..||.+..+
T Consensus 215 ~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~ 250 (273)
T 2qjg_A 215 TDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGIT 250 (273)
T ss_dssp SHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHH
Confidence 888554442 36999999999999999876543
No 70
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.34 E-value=8.6e-12 Score=115.52 Aligned_cols=148 Identities=17% Similarity=0.142 Sum_probs=107.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 7 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
...|+.++++.++ ...+..+++.|+|.|.||... .+++.+.+.++.+++..++||.++.-
T Consensus 94 ~~~pvga~ig~~~---~e~a~~l~eaGad~I~ld~a~---------------G~~~~~~~~i~~i~~~~~~~Vivg~v-- 153 (361)
T 3khj_A 94 GGLRVGAAIGVNE---IERAKLLVEAGVDVIVLDSAH---------------GHSLNIIRTLKEIKSKMNIDVIVGNV-- 153 (361)
T ss_dssp TCCCCEEEECTTC---HHHHHHHHHTTCSEEEECCSC---------------CSBHHHHHHHHHHHHHCCCEEEEEEE--
T ss_pred cCceEEEEeCCCH---HHHHHHHHHcCcCeEEEeCCC---------------CCcHHHHHHHHHHHHhcCCcEEEccC--
Confidence 3578999997766 333444567899999999542 14677788899988877999998631
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCC--Cc--CCCCccccHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRD--EK--DGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~--~~--~~~~~~~~~~~i~~i~~---~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
.+.+.++.+.++|+|+|.|...... .. ....+.+++..+.++++ .+++|||++|||.+++|+.+++. .
T Consensus 154 ----~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala-~ 228 (361)
T 3khj_A 154 ----VTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALA-V 228 (361)
T ss_dssp ----CSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHH-H
T ss_pred ----CCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHH-c
Confidence 2346688899999999999311100 00 01122456777766643 45899999999999999999999 5
Q ss_pred CccEEEEehhhhhCccchhc
Q 023070 160 GCEGVLSAESLLENPALFAG 179 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf~~ 179 (287)
|||+||+|++++..+....+
T Consensus 229 GAd~V~vGs~~~~t~Esp~~ 248 (361)
T 3khj_A 229 GASSVMIGSILAGTEESPGE 248 (361)
T ss_dssp TCSEEEESTTTTTBTTSSCE
T ss_pred CCCEEEEChhhhcCCcCCcc
Confidence 99999999999988775443
No 71
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.31 E-value=1.5e-11 Score=107.00 Aligned_cols=127 Identities=13% Similarity=0.165 Sum_probs=96.4
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcC
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAG 103 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G 103 (287)
.++...++.|+|.|-++.. ...+|+.+.++++.+++. +.++.+.+. +.+.++.+++.|
T Consensus 92 ~~i~~~~~aGad~I~l~~~--------------~~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~G 149 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDAS--------------FRSRPVDIDSLLTRIRLH-GLLAMADCS-------TVNEGISCHQKG 149 (229)
T ss_dssp HHHHHHHHHTCSEEEEECC--------------SSCCSSCHHHHHHHHHHT-TCEEEEECS-------SHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEECcc--------------ccCChHHHHHHHHHHHHC-CCEEEEecC-------CHHHHHHHHhCC
Confidence 3444456679999988743 124667788888888764 788887753 345678889999
Q ss_pred CCEEEE--eccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 104 CSLLAV--HGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 104 ~~~I~v--h~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
+++|.+ +|+|...+ ...++|+.++++++. ++|||++|||.|++|+.++++ .|||+|++|++++ +|+.+.
T Consensus 150 ad~Ig~~~~g~t~~~~---~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~-~GadgV~VGsai~-~p~~~~ 220 (229)
T 3q58_A 150 IEFIGTTLSGYTGPIT---PVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIE-HGAWAVTVGSAIT-RIEHIC 220 (229)
T ss_dssp CSEEECTTTTSSSSCC---CSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHH-CHHHHH
T ss_pred CCEEEecCccCCCCCc---CCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHH-cCCCEEEEchHhc-ChHHHH
Confidence 999964 55554432 235789999999988 999999999999999999998 5999999996665 677554
No 72
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.31 E-value=3e-11 Score=111.75 Aligned_cols=147 Identities=14% Similarity=0.203 Sum_probs=121.0
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
..|+-..++-.+++++.++|+ ..+.||+.|+||+||+ +++...++++++++.+ ++++.++.+
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 345555543368999998887 4567999999999872 4677889999999887 689999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
.+|+.+++.++++.+++.|+++|- +.. .+.||+.++++++.+++||++++.+.+++++.++++...||.|
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iE-------~P~---~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v 267 (359)
T 1mdl_A 198 QSLDVPAAIKRSQALQQEGVTWIE-------EPT---LQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLA 267 (359)
T ss_dssp TCSCHHHHHHHHHHHHHHTCSCEE-------CCS---CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEE-------CCC---ChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999999872 211 1468999999999999999999999999999999998889999
Q ss_pred EEehhhhhCccchhc
Q 023070 165 LSAESLLENPALFAG 179 (287)
Q Consensus 165 miGR~~l~nP~lf~~ 179 (287)
++..+-++.++-+.+
T Consensus 268 ~ik~~~~GGi~~~~~ 282 (359)
T 1mdl_A 268 MPDAMKIGGVTGWIR 282 (359)
T ss_dssp CCBTTTTTHHHHHHH
T ss_pred eecchhhCCHHHHHH
Confidence 997766666554443
No 73
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.30 E-value=2.1e-11 Score=106.38 Aligned_cols=126 Identities=11% Similarity=0.139 Sum_probs=95.6
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcC
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAG 103 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G 103 (287)
.++-..++.|+|.|-++.. ...+|+.+.++++.+++. ++++.+.+. +.+.++.+++.|
T Consensus 92 ~~i~~~~~~Gad~V~l~~~--------------~~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~G 149 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGT--------------ARQRPVAVEALLARIHHH-HLLTMADCS-------SVDDGLACQRLG 149 (232)
T ss_dssp HHHHHHHHHTCSEEEEECC--------------SSCCSSCHHHHHHHHHHT-TCEEEEECC-------SHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEECcc--------------ccCCHHHHHHHHHHHHHC-CCEEEEeCC-------CHHHHHHHHhCC
Confidence 3444456679999988742 224667788888888764 778887643 245678889999
Q ss_pred CCEEEE--eccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccch
Q 023070 104 CSLLAV--HGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 177 (287)
Q Consensus 104 ~~~I~v--h~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf 177 (287)
+++|.+ +|+|...+ ....+|+.++++++. ++|||++|||.|++|+.++++ .|||+|++|++++ +|+..
T Consensus 150 ad~Ig~~~~g~t~~~~---~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~-~GadgV~VGsal~-~p~~~ 219 (232)
T 3igs_A 150 ADIIGTTMSGYTTPDT---PEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIR-YGAWAVTVGSAIT-RLEHI 219 (232)
T ss_dssp CSEEECTTTTSSSSSC---CSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHH-CHHHH
T ss_pred CCEEEEcCccCCCCCC---CCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHH-cCCCEEEEehHhc-CHHHH
Confidence 999964 45554332 235789999999988 999999999999999999998 5999999997766 67644
No 74
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.29 E-value=6.3e-11 Score=110.42 Aligned_cols=144 Identities=12% Similarity=0.067 Sum_probs=120.7
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
..|+-..+...+++.+.++|+ ..+.||+.|+||+|+ +++...+++++|++.+ ++++.++.+
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan 197 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADAN 197 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECT
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 345555554478999999887 456799999999886 4688889999999988 599999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
.+|+.++++++++.+++.|+ +|. + .. + +|+..+++++.+++||++++.+.+++++.++++.+.||.|
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i-~iE-------~--P~--~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v 264 (379)
T 2rdx_A 198 QGWRVDNAIRLARATRDLDY-ILE-------Q--PC--R-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEIC 264 (379)
T ss_dssp TCSCHHHHHHHHHHTTTSCC-EEE-------C--CS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhCCe-EEe-------C--Cc--C-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 99999999999999999999 762 2 12 3 8999999999999999999999999999999998889999
Q ss_pred EEehhhhhCccchhch
Q 023070 165 LSAESLLENPALFAGF 180 (287)
Q Consensus 165 miGR~~l~nP~lf~~~ 180 (287)
++-.+-.+.++-+.++
T Consensus 265 ~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 265 CLKISNLGGLSKARRT 280 (379)
T ss_dssp EEETTTTTSHHHHHHH
T ss_pred EEeccccCCHHHHHHH
Confidence 9987777776654443
No 75
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=99.28 E-value=6.3e-11 Score=110.45 Aligned_cols=146 Identities=11% Similarity=0.033 Sum_probs=125.9
Q ss_pred CCCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 023070 6 PEDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 82 (287)
Q Consensus 6 ~~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vK 82 (287)
.+..|+..++++.+|+.+++.++ .++.||+.|.|++|| +++...+++++|++++ ++++.++
T Consensus 132 r~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vD 195 (378)
T 3eez_A 132 RTPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYD 195 (378)
T ss_dssp CSCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEE
T ss_pred CCeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 34567888999999999999887 457799999999986 3666788999999987 6899999
Q ss_pred ecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
.+.+|+.+++.++++.+++.|+ +|. + .. + +|+.++++++.+++||++++.+.+++++.++++.+++|
T Consensus 196 an~~~~~~~a~~~~~~l~~~~i-~iE-------q--P~--~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d 262 (378)
T 3eez_A 196 VNRGWTRQQALRVMRATEDLHV-MFE-------Q--PG--E-TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAE 262 (378)
T ss_dssp CTTCCCHHHHHHHHHHTGGGTC-CEE-------C--CS--S-SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHHHHhccCCe-EEe-------c--CC--C-CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCC
Confidence 9999999999999999999998 772 2 11 3 89999999999999999999999999999999988899
Q ss_pred EEEEehhhhhCccchhch
Q 023070 163 GVLSAESLLENPALFAGF 180 (287)
Q Consensus 163 ~VmiGR~~l~nP~lf~~~ 180 (287)
.|++..+..+.++-+.++
T Consensus 263 ~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 263 VFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp EEEEEHHHHTSHHHHHHH
T ss_pred EEEeCchhcCCHHHHHHH
Confidence 999999888888766554
No 76
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.27 E-value=2.2e-11 Score=105.90 Aligned_cols=156 Identities=18% Similarity=0.234 Sum_probs=106.6
Q ss_pred CCCEEEEecCCC----HH--HHHHHHHHH-cCCCCEEEEe-----------ccCChh-hhhcC-----------------
Q 023070 8 DRPLFVQFCAND----PE--ILLNAARRV-EPYCDYVDIN-----------LGCPQR-IARRG----------------- 51 (287)
Q Consensus 8 ~~p~~~Qi~g~~----~~--~~~~aA~~~-~~g~d~IdiN-----------~gcP~~-~~~~~----------------- 51 (287)
..++++|...++ ++ .+.+.++.+ +.|+++|.++ .++|.- ..+++
T Consensus 17 ~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~ 96 (234)
T 1yxy_A 17 GIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQ 96 (234)
T ss_dssp SCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEESHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHH
T ss_pred CEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecCCHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHH
Confidence 445667776655 66 677777654 4588888887 345541 11111
Q ss_pred --ccccccc-------CCh--HHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEE--EEeccCCCCc
Q 023070 52 --NYGAFLM-------DNL--PLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLL--AVHGRTRDEK 117 (287)
Q Consensus 52 --~~G~~l~-------~~~--~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I--~vh~rt~~~~ 117 (287)
..|+... .+| ..+.++++.+++.. +.++.+.++. .+-++.+.+.|+|+| ++++.+....
T Consensus 97 ~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-------~~ea~~a~~~Gad~i~~~v~g~~~~~~ 169 (234)
T 1yxy_A 97 LAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIST-------FDEGLVAHQAGIDFVGTTLSGYTPYSR 169 (234)
T ss_dssp HHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-------HHHHHHHHHTTCSEEECTTTTSSTTSC
T ss_pred HHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-------HHHHHHHHHcCCCEEeeeccccCCCCc
Confidence 1232211 123 24567777777665 6777776432 233777889999999 7787654321
Q ss_pred CCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 118 DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 118 ~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
.. ...+++.++++++. ++||+++|||+|++++.++++ .|||+|++||+++. |+
T Consensus 170 -~~-~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~-~Gad~v~vGsal~~-p~ 222 (234)
T 1yxy_A 170 -QE-AGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKIND-LGVAGIVVGGAITR-PK 222 (234)
T ss_dssp -CS-SSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHT-TCCSEEEECHHHHC-HH
T ss_pred -CC-CCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHH-CCCCEEEEchHHhC-hH
Confidence 11 24689999999988 999999999999999999998 59999999999887 64
No 77
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.27 E-value=6.2e-11 Score=107.36 Aligned_cols=153 Identities=20% Similarity=0.214 Sum_probs=96.4
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCC
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPN 88 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~ 88 (287)
.+++++. +|.++++++ .+.|+|+|.+. ||.+...+...|+..+++++.+.++. +.+++||.+|+|.+..
T Consensus 22 ~g~i~~~---~~~~~a~~~--~~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I~----~~~~iPv~~k~r~g~~ 90 (305)
T 2nv1_A 22 GGVIMDV---INAEQAKIA--EEAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEVM----NAVSIPVMAKARIGHI 90 (305)
T ss_dssp TCEEEEE---SSHHHHHHH--HHTTCSEEEEC--CC-------CCCCCCCCCHHHHHHHH----HHCSSCEEEEECTTCH
T ss_pred CCeeecC---CHHHHHHHH--HHcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHHH----HhCCCCEEecccccch
Confidence 3465533 555544433 45699999544 36655555556777888888777664 4468999999998531
Q ss_pred ---------------------h--------------------hhHHHHHHHHHHcCCCEEEEecc--------------C
Q 023070 89 ---------------------L--------------------QDTIKYAKMLEDAGCSLLAVHGR--------------T 113 (287)
Q Consensus 89 ---------------------~--------------------~~~~~~a~~l~~~G~~~I~vh~r--------------t 113 (287)
. .+..+.. +..+.|+++|.++|. +
T Consensus 91 ~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~-~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt 169 (305)
T 2nv1_A 91 VEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEAT-RRIAEGASMLRTKGEPGTGNIVEAVRHMRK 169 (305)
T ss_dssp HHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHH-HHHHTTCSEEEECCCTTSCCTHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHH-HHHHCCCCEEEeccccCccchHHHHhhhhh
Confidence 0 0011222 223566776666431 1
Q ss_pred ------------CCCcCC--CCccccHHHHHHHHhhCCCcEE--EecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 114 ------------RDEKDG--KKFRADWNAIKAVKNALRIPVL--ANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 114 ------------~~~~~~--~~~~~~~~~i~~i~~~~~ipVi--~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
..+.+. ...+.+++.++++++.+++||+ ++|||.|++|+.++++ .|||+|++||+++..+
T Consensus 170 ~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~-~GadgV~vGsai~~~~ 245 (305)
T 2nv1_A 170 VNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQ-LGADGVFVGSGIFKSD 245 (305)
T ss_dssp HHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHH-TTCSCEEECGGGGGSS
T ss_pred hhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHH-cCCCEEEEcHHHHcCC
Confidence 000000 0024678899999988899999 9999999999999998 6999999999999644
No 78
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.26 E-value=5.7e-11 Score=110.40 Aligned_cols=137 Identities=13% Similarity=0.090 Sum_probs=117.2
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
+++++.++|+ ..+.||+.|+|++||+ +++...++++++++.+ ++++.++.+.+|+.++++++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~ 210 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRA 210 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 8999998887 4577999999999874 4677788999999887 69999999999999999999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++.+++.|+++|- +.. .+.||+.++++++.+++||++++.+.|++++.++++...||.|++..+-++.++
T Consensus 211 ~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 280 (371)
T 2ovl_A 211 ARALAPFDLHWIE-------EPT---IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYT 280 (371)
T ss_dssp HHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHH
T ss_pred HHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHH
Confidence 9999999999873 211 146899999999999999999999999999999999888999999877777776
Q ss_pred chhch
Q 023070 176 LFAGF 180 (287)
Q Consensus 176 lf~~~ 180 (287)
-+.++
T Consensus 281 ~~~~i 285 (371)
T 2ovl_A 281 TFRKV 285 (371)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 79
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.25 E-value=9.4e-11 Score=109.19 Aligned_cols=145 Identities=10% Similarity=0.121 Sum_probs=122.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 7 EDRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
+..|+...+...+++.+.++|+. ++.||+.|+|++||| +++...++++++++.+ ++++.++.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (378)
T 2qdd_A 133 TPVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDV 197 (378)
T ss_dssp CCEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEEC
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34566667766899999998874 567999999999886 4678889999999987 68999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+.+|+.++++++++.++ .|+ +| ++ .. + ||+.++++++.+++||++++.+.+++++.++++...+|.
T Consensus 198 n~~~~~~~a~~~~~~l~-~~i-~i-------Eq--P~--~-d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~ 263 (378)
T 2qdd_A 198 NRAWTPAIAVEVLNSVR-ARD-WI-------EQ--PC--Q-TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEG 263 (378)
T ss_dssp TTCCCHHHHHHHHTSCC-CCC-EE-------EC--CS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSE
T ss_pred CCCCCHHHHHHHHHHhC-CCc-EE-------Ec--CC--C-CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCE
Confidence 99999999999999998 888 66 22 12 3 899999999999999999999999999999999889999
Q ss_pred EEEehhhhhCccchhch
Q 023070 164 VLSAESLLENPALFAGF 180 (287)
Q Consensus 164 VmiGR~~l~nP~lf~~~ 180 (287)
|++-.+.++.++-+.++
T Consensus 264 v~ik~~~~GGi~~~~~i 280 (378)
T 2qdd_A 264 VKIKPNRVGGLTRARQI 280 (378)
T ss_dssp EEECHHHHTSHHHHHHH
T ss_pred EEecccccCCHHHHHHH
Confidence 99988888887755544
No 80
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.24 E-value=9.5e-11 Score=109.55 Aligned_cols=145 Identities=9% Similarity=0.044 Sum_probs=120.1
Q ss_pred CCEEEEec-CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 9 RPLFVQFC-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 9 ~p~~~Qi~-g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
.|+-..++ ..++++|.++|+ ..+.||+.|+|++|| .+++. .++++++++++ ++++.++.+
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 45555554 368999999887 456799999999875 24677 89999999877 699999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
.+|+.+++.++++.+++.|+++|. +.. .+.+|+..+++++.+++||++++.+.+++++.++++...||.|
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 286 (388)
T 2nql_A 217 WNQTPERALELIAEMQPFDPWFAE-------APV---WTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIV 286 (388)
T ss_dssp SCSCHHHHHHHHHHHGGGCCSCEE-------CCS---CTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEE-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999999873 211 1468999999999999999999999999999999998889999
Q ss_pred EEehhhhhCccchhch
Q 023070 165 LSAESLLENPALFAGF 180 (287)
Q Consensus 165 miGR~~l~nP~lf~~~ 180 (287)
++-..- +.++-+.++
T Consensus 287 ~ik~~~-GGit~~~~i 301 (388)
T 2nql_A 287 QPEMGH-KGITNFIRI 301 (388)
T ss_dssp CCCHHH-HCHHHHHHH
T ss_pred EecCCC-CCHHHHHHH
Confidence 997777 776644433
No 81
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.24 E-value=8.4e-11 Score=108.51 Aligned_cols=137 Identities=16% Similarity=0.153 Sum_probs=96.3
Q ss_pred CCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHH
Q 023070 17 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 17 g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 95 (287)
|..++....+..++++|+|.|.|+..+. .++.+.++++.+++.. ++||.+|-- .+.+.
T Consensus 96 g~~~~~~e~~~~a~~aGvdvI~id~a~G---------------~~~~~~e~I~~ir~~~~~~~Vi~G~V------~T~e~ 154 (361)
T 3r2g_A 96 GCTENELQRAEALRDAGADFFCVDVAHA---------------HAKYVGKTLKSLRQLLGSRCIMAGNV------ATYAG 154 (361)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEEECSCC---------------SSHHHHHHHHHHHHHHTTCEEEEEEE------CSHHH
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEeCCCC---------------CcHhHHHHHHHHHHhcCCCeEEEcCc------CCHHH
Confidence 3344444444446678999999985432 1345678888998876 799999721 22456
Q ss_pred HHHHHHcCCCEEEEe--ccCCCCc--CCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 96 AKMLEDAGCSLLAVH--GRTRDEK--DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 96 a~~l~~~G~~~I~vh--~rt~~~~--~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
++.+.++|+|+|.|. +...... ..+.+.+.++.+.++++... |||++|||+++.|+.++|. .|||+||+||+++
T Consensus 155 A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa-~GAd~V~iGr~f~ 232 (361)
T 3r2g_A 155 ADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALA-FGADFVMIGGMLA 232 (361)
T ss_dssp HHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHH-TTCSEEEESGGGT
T ss_pred HHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHH-cCCCEEEEChHHh
Confidence 888999999999983 2111000 00112346777777776655 9999999999999999999 5999999999998
Q ss_pred hCccc
Q 023070 172 ENPAL 176 (287)
Q Consensus 172 ~nP~l 176 (287)
.....
T Consensus 233 ~t~Es 237 (361)
T 3r2g_A 233 GSAPT 237 (361)
T ss_dssp TBTTS
T ss_pred CCccC
Confidence 77653
No 82
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.21 E-value=2.3e-10 Score=106.20 Aligned_cols=147 Identities=10% Similarity=0.133 Sum_probs=123.3
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
+..|+..++++.+|+++.++|+ .++.||+.|+||+|. +++...++++++++.+ ++++.++.
T Consensus 129 ~~v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 192 (369)
T 2p8b_A 129 EEFPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDV 192 (369)
T ss_dssp SCEECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CceeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 3456667888889999999887 457799999999873 4778889999999887 68999999
Q ss_pred cCCCChhhHH-HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 84 RVFPNLQDTI-KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 84 R~g~~~~~~~-~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
+.+|+.++++ ++++.+++.|+++|. +.. .+.||+..+++++.+++||++++.+.+++++.++++...+|
T Consensus 193 n~~~~~~~a~~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d 262 (369)
T 2p8b_A 193 NQGWKNSANTLTALRSLGHLNIDWIE-------QPV---IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAAD 262 (369)
T ss_dssp TTTTBSHHHHHHHHHTSTTSCCSCEE-------CCB---CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHHhCCCcEEE-------CCC---CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC
Confidence 9999999999 999999999999873 211 14689999999999999999999999999999999988899
Q ss_pred EEEEehhhhhCccchhc
Q 023070 163 GVLSAESLLENPALFAG 179 (287)
Q Consensus 163 ~VmiGR~~l~nP~lf~~ 179 (287)
.|++-.+-++.+.-+.+
T Consensus 263 ~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 263 KVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp EEEECHHHHTSHHHHHH
T ss_pred EEEeecchhCCHHHHHH
Confidence 99998777766654443
No 83
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.20 E-value=4e-10 Score=105.78 Aligned_cols=151 Identities=11% Similarity=0.064 Sum_probs=123.9
Q ss_pred CCCCEEEEec-CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCCh-HHHHHHHHHHhhcc--CCcEEE
Q 023070 7 EDRPLFVQFC-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNL-PLVKSLVEKLALNL--NVPVSC 81 (287)
Q Consensus 7 ~~~p~~~Qi~-g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~-~~~~~iv~~v~~~~--~~pv~v 81 (287)
+..|+-..+. +.+++++.++|+ ..+.||+.|+|++ ||. |+ ++ +...+++++|++.+ ++++.+
T Consensus 132 ~~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~v 198 (401)
T 2hzg_A 132 HGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMV 198 (401)
T ss_dssp CCBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3456655554 679999999887 4567999999996 664 33 45 77889999999887 689999
Q ss_pred EecCCC--ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHh-hCCCcEEEecCCCCHHHHHHHHHh
Q 023070 82 KIRVFP--NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALRIPVLANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 82 KiR~g~--~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~-~~~ipVi~nGgI~s~~da~~~l~~ 158 (287)
+.+.+| +.++++++++.+++.|+++|- +.. .+.||+..+++++ .+++||++++.+.+++++.++++.
T Consensus 199 Dan~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~ 268 (401)
T 2hzg_A 199 DVGQIFGEDVEAAAARLPTLDAAGVLWLE-------EPF---DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDY 268 (401)
T ss_dssp ECTTTTTTCHHHHHTTHHHHHHTTCSEEE-------CCS---CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHC
Confidence 999999 999999999999999999873 211 1468999999999 899999999999999999999998
Q ss_pred cCccEEEEehhhhhCccchhch
Q 023070 159 TGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 159 ~gad~VmiGR~~l~nP~lf~~~ 180 (287)
..||.|++-..-++.++-+.++
T Consensus 269 ~~~d~v~ik~~~~GGit~~~~i 290 (401)
T 2hzg_A 269 GRIGFIQIDCGRIGGLGPAKRV 290 (401)
T ss_dssp SCCSEEEECHHHHTSHHHHHHH
T ss_pred CCCCEEEeCcchhCCHHHHHHH
Confidence 8899999988777777654433
No 84
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.19 E-value=6.9e-10 Score=103.36 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=117.2
Q ss_pred CCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
.+++++.++|+. ++.||+.|.|++|++. +| ...+++...++++++++++ ++++.++.+-+|+.+++++
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~ 218 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALA 218 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 689999998874 5679999999999864 22 3458899999999999977 6899999999999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCC-HHHHHHHHHhcCccEEEEehhhhhC
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRH-MEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s-~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
+++.+++.|+++|- +. . .+.+|+..+++++.+++||++.+.+.+ ++++.++++...+|.|++--.-.+.
T Consensus 219 ~~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 288 (382)
T 1rvk_A 219 LGRGLEKLGFDWIE-------EP--M-DEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGG 288 (382)
T ss_dssp HHHHHHTTTCSEEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HHHHHHhcCCCEEe-------CC--C-ChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCC
Confidence 99999999999873 21 1 136899999999999999999999999 9999999998889999996555554
Q ss_pred cc
Q 023070 174 PA 175 (287)
Q Consensus 174 P~ 175 (287)
..
T Consensus 289 it 290 (382)
T 1rvk_A 289 IT 290 (382)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 85
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.16 E-value=4.4e-11 Score=104.53 Aligned_cols=97 Identities=12% Similarity=0.264 Sum_probs=83.0
Q ss_pred EEEEecCCCCh------hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHH
Q 023070 79 VSCKIRVFPNL------QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDV 152 (287)
Q Consensus 79 v~vKiR~g~~~------~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da 152 (287)
..||++.||.. .++.++++.+++.|++.|+++.++...... ..+++.+++++ .+++||+++|||++++++
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~---~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~ 88 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIENS---GENLPVLEKLS-EFAEHIQIGGGIRSLDYA 88 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHHCC---CTTHHHHHHGG-GGGGGEEEESSCCSHHHH
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEecccccccCC---chhHHHHHHHH-hcCCcEEEECCCCCHHHH
Confidence 56788887632 478899999999999999999876542221 46789999998 789999999999999999
Q ss_pred HHHHHhcCccEEEEehhhhhCccchhch
Q 023070 153 QKCLEETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
.++++ .|||+|++|++++.||+++.++
T Consensus 89 ~~~~~-~Gad~V~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 89 EKLRK-LGYRRQIVSSKVLEDPSFLKSL 115 (241)
T ss_dssp HHHHH-TTCCEEEECHHHHHCTTHHHHH
T ss_pred HHHHH-CCCCEEEECchHhhChHHHHHH
Confidence 99998 5999999999999999998887
No 86
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.15 E-value=1.1e-09 Score=101.53 Aligned_cols=143 Identities=10% Similarity=0.100 Sum_probs=120.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 7 EDRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
+..|+...+.+.+++++.++|+. .+.||+.|.|++|. +++...++++++++.+ ++++.++.
T Consensus 134 ~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 134 TRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp SCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 35577777888899999998874 56799999999873 4778889999999987 68999999
Q ss_pred cCCCChhhHHHHHHHH-HHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 84 RVFPNLQDTIKYAKML-EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l-~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
+-+|+.++++++++.+ ++.|+ +|. + +.+ ||+..+++++.+++||++.+.+.+++++.++++...||
T Consensus 198 n~~~~~~~a~~~~~~l~~~~~i-~iE-------~----P~~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d 264 (371)
T 2ps2_A 198 NGKLSVETALRLLRLLPHGLDF-ALE-------A----PCA-TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAE 264 (371)
T ss_dssp TTBCCHHHHHHHHHHSCTTCCC-EEE-------C----CBS-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCS
T ss_pred CCCcCHHHHHHHHHHHHhhcCC-cCc-------C----CcC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 9999999999999999 99998 762 1 113 89999999999999999999999999999999988899
Q ss_pred EEEEehhhhhCccchh
Q 023070 163 GVLSAESLLENPALFA 178 (287)
Q Consensus 163 ~VmiGR~~l~nP~lf~ 178 (287)
.|++--+-.+...-+.
T Consensus 265 ~v~ik~~~~GGit~~~ 280 (371)
T 2ps2_A 265 GIDLKISKAGGLTRGR 280 (371)
T ss_dssp EEEEEHHHHTSHHHHH
T ss_pred EEEechhhcCCHHHHH
Confidence 9999776666655333
No 87
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.15 E-value=2.5e-10 Score=110.39 Aligned_cols=141 Identities=16% Similarity=0.153 Sum_probs=100.8
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCCh
Q 023070 11 LFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNL 89 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~ 89 (287)
+.+.+ |...+.+.++..+++.|+|.|.||..+| ++..+.++++.+++.. ++||.++-
T Consensus 247 V~aav-g~~~d~~era~aLveaGvd~I~Id~a~g---------------~~~~v~~~i~~i~~~~~~~~vi~g~------ 304 (511)
T 3usb_A 247 VGAAV-GVTADAMTRIDALVKASVDAIVLDTAHG---------------HSQGVIDKVKEVRAKYPSLNIIAGN------ 304 (511)
T ss_dssp CEEEE-CSSTTHHHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTSEEEEEE------
T ss_pred eeeee-eeccchHHHHHHHHhhccceEEeccccc---------------chhhhhhHHHHHHHhCCCceEEeee------
Confidence 44555 3345667777777889999999997654 3455778888888876 57888862
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCc-----CCCCccccHHHHHHHH---hhCCCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEK-----DGKKFRADWNAIKAVK---NALRIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~-----~~~~~~~~~~~i~~i~---~~~~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
-.+.+.++.+.++|+|+|.| |...... ..+.+.+++..+..++ +..++|||++|||+++.|+.+++. .||
T Consensus 305 v~t~e~a~~~~~aGad~i~v-g~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala-~GA 382 (511)
T 3usb_A 305 VATAEATKALIEAGANVVKV-GIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALA-AGA 382 (511)
T ss_dssp ECSHHHHHHHHHHTCSEEEE-CSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHH-TTC
T ss_pred eccHHHHHHHHHhCCCEEEE-CCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHH-hCc
Confidence 12356688899999999998 2211100 0112245666666654 345799999999999999999998 599
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|+||+||+++.-..
T Consensus 383 ~~V~vGs~~~~~~e 396 (511)
T 3usb_A 383 HVVMLGSMFAGVAE 396 (511)
T ss_dssp SEEEESTTTTTBTT
T ss_pred hhheecHHHhcCcc
Confidence 99999999865444
No 88
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.15 E-value=2.2e-10 Score=110.27 Aligned_cols=138 Identities=18% Similarity=0.238 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHH
Q 023070 20 PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKM 98 (287)
Q Consensus 20 ~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~ 98 (287)
.+...++..+++.|+|.|.+|+. .| .+....++++++++.+ ++||.++- +.+ .+.++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~----------~G-----~~~~~~e~i~~i~~~~p~~pvi~g~--~~t----~e~a~~ 294 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTA----------HG-----HSRRVIETLEMIKADYPDLPVVAGN--VAT----PEGTEA 294 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCS----------CC-----SSHHHHHHHHHHHHHCTTSCEEEEE--ECS----HHHHHH
T ss_pred HhHHHHHHHHHHhCCCEEEEEec----------CC-----chHHHHHHHHHHHHHCCCceEEeCC--cCC----HHHHHH
Confidence 34444455567889999999863 12 3566778899999887 79998862 122 344678
Q ss_pred HHHcCCCEEEEeccCCC--C-c-CCCCccccHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 99 LEDAGCSLLAVHGRTRD--E-K-DGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 99 l~~~G~~~I~vh~rt~~--~-~-~~~~~~~~~~~i~~i~~---~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
+.++|+|+|.|.+.... . . ....+.+.+..+..+++ .+++|||++|||+++.|+.+++. .|||+|++||+++
T Consensus 295 l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala-~GAd~V~iGr~~l 373 (494)
T 1vrd_A 295 LIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALA-AGAESVMVGSIFA 373 (494)
T ss_dssp HHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHH
T ss_pred HHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHHh
Confidence 88999999999432110 0 0 00012244555555544 36899999999999999999998 5999999999999
Q ss_pred hCccchhc
Q 023070 172 ENPALFAG 179 (287)
Q Consensus 172 ~nP~lf~~ 179 (287)
..|.+..+
T Consensus 374 ~~~e~~~~ 381 (494)
T 1vrd_A 374 GTEEAPGE 381 (494)
T ss_dssp TBTTSSSE
T ss_pred cCCcCCcc
Confidence 98887553
No 89
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.14 E-value=9.3e-10 Score=96.33 Aligned_cols=165 Identities=17% Similarity=0.169 Sum_probs=112.4
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHcCCCCEEEEe--ccCChh-hh-hcCccccccc--CChHHHHHHHHHHhhccCCcE
Q 023070 8 DRPLFVQFCANDP--EILLNAARRVEPYCDYVDIN--LGCPQR-IA-RRGNYGAFLM--DNLPLVKSLVEKLALNLNVPV 79 (287)
Q Consensus 8 ~~p~~~Qi~g~~~--~~~~~aA~~~~~g~d~IdiN--~gcP~~-~~-~~~~~G~~l~--~~~~~~~~iv~~v~~~~~~pv 79 (287)
..++++.|.+.|| +.+.+.++.+++++|.|+++ ++||.- .. .....-.+|. .+.....++++++++.+++||
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv 83 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPI 83 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGGBSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCE
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCE
Confidence 3568999999999 58888888654339999999 677762 00 0000000000 266777899999999888998
Q ss_pred EEEecCCCC-hhhHHHHHHHHHHcCCCEEEEeccCC---------------------CC---------------------
Q 023070 80 SCKIRVFPN-LQDTIKYAKMLEDAGCSLLAVHGRTR---------------------DE--------------------- 116 (287)
Q Consensus 80 ~vKiR~g~~-~~~~~~~a~~l~~~G~~~I~vh~rt~---------------------~~--------------------- 116 (287)
.+....... .....++++.+.++|+++|++|.-.. ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~ 163 (248)
T 1geq_A 84 VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLV 163 (248)
T ss_dssp EEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEE
T ss_pred EEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEE
Confidence 876421000 01125678888889999998874100 00
Q ss_pred -cCCCCc------cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 117 -KDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 117 -~~~~~~------~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
..+..+ +..++.++++++.+++||++.|||++++++.++++ .|+|+|.+|++++..
T Consensus 164 ~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~-~Gad~vivGsai~~~ 226 (248)
T 1geq_A 164 SLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EGANGVVVGSALVKI 226 (248)
T ss_dssp CCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHHH
T ss_pred ECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHH-cCCCEEEEcHHHHhh
Confidence 000011 12367888999888999999999999999999987 599999999998864
No 90
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.14 E-value=5.9e-10 Score=104.21 Aligned_cols=130 Identities=21% Similarity=0.189 Sum_probs=95.5
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcC
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAG 103 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G 103 (287)
..+..+++.|+|.|.|+.. .| .++.+.++++.+++..++||.++.- .+.+.++.+.++|
T Consensus 147 e~~~~lveaGvdvIvldta----------~G-----~~~~~~e~I~~ik~~~~i~Vi~g~V------~t~e~A~~a~~aG 205 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSA----------HG-----HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEATKELIENG 205 (400)
T ss_dssp HHHHHHHHHTCSEEEECCS----------CC-----SBHHHHHHHHHHHTTCCCEEEEEEE------CSHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEeCC----------CC-----CcccHHHHHHHHHhcCCCeEEEeec------CCHHHHHHHHHcC
Confidence 3344456779999988642 11 4567788889998887899988621 2356788899999
Q ss_pred CCEEEEec------cCCCCcCCCCccccHHHHHHHHhh---CCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 104 CSLLAVHG------RTRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 104 ~~~I~vh~------rt~~~~~~~~~~~~~~~i~~i~~~---~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
+|+|.+.. .++.. ...+.+++..+.++++. +++|||++|||.+++|+.+++. .|||+||+|++++.-+
T Consensus 206 AD~I~vG~g~Gs~~~tr~~--~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kala-lGAd~V~vGt~f~~t~ 282 (400)
T 3ffs_A 206 ADGIKVGIGPGSICTTRIV--AGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALA-VGASSVMIGSILAGTE 282 (400)
T ss_dssp CSEEEECC---------CC--SCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHT-TTCSEEEECGGGTTBT
T ss_pred CCEEEEeCCCCcCcccccc--cccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHH-cCCCEEEEChHHhcCC
Confidence 99999931 11211 11234677878877654 5899999999999999999998 5999999999999866
Q ss_pred cch
Q 023070 175 ALF 177 (287)
Q Consensus 175 ~lf 177 (287)
.-.
T Consensus 283 Es~ 285 (400)
T 3ffs_A 283 ESP 285 (400)
T ss_dssp TSS
T ss_pred CCC
Confidence 633
No 91
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=99.14 E-value=8.5e-10 Score=103.18 Aligned_cols=142 Identities=10% Similarity=0.117 Sum_probs=120.0
Q ss_pred CCEEEEe-c-CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 9 RPLFVQF-C-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 9 ~p~~~Qi-~-g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
.|+-..+ . +.+|+++++.++ .++.||+.|.|++|| +++...+++++|++.+ ++++.++.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 5777777 5 689999999887 457799999999886 4677788899999886 68999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHH-hhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK-NALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~-~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
+.+|+.+++.++++.+++.|+++|. +.. .+.|++.+++++ +.+++||++++.+.+++++.++++...+|
T Consensus 203 n~~~~~~~A~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d 272 (389)
T 3ozy_A 203 NQSLGRHDALAMLRILDEAGCYWFE-------EPL---SIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAID 272 (389)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE-------SCS---CTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCS
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999983 211 135899999999 99999999999999999999999988899
Q ss_pred EEEEehhhhhCccc
Q 023070 163 GVLSAESLLENPAL 176 (287)
Q Consensus 163 ~VmiGR~~l~nP~l 176 (287)
.|++--+-.+...-
T Consensus 273 ~v~ik~~~~GGit~ 286 (389)
T 3ozy_A 273 VLQADASRAGGITE 286 (389)
T ss_dssp EECCCTTTSSCHHH
T ss_pred EEEeCccccCCHHH
Confidence 99996655555543
No 92
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.13 E-value=1.1e-09 Score=96.11 Aligned_cols=151 Identities=11% Similarity=0.160 Sum_probs=109.8
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc-cCCcEEEEecC--
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-LNVPVSCKIRV-- 85 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~-~~~pv~vKiR~-- 85 (287)
.++-+|++|.- ..+..+.++++.|+|-|-|| +...++|+++.++.+..... +-+.+.+|.+-
T Consensus 74 ~~~pl~vGGGI-rs~e~~~~~l~~GadkVii~--------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~ 138 (243)
T 4gj1_A 74 VSVNLQVGGGI-RSKEEVKALLDCGVKRVVIG--------------SMAIKDATLCLEILKEFGSEAIVLALDTILKEDY 138 (243)
T ss_dssp CCSEEEEESSC-CCHHHHHHHHHTTCSEEEEC--------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSE
T ss_pred cCCCeEecccc-ccHHHHHHHHHcCCCEEEEc--------------cccccCCchHHHHHhcccCceEEEEEEEEeCCCC
Confidence 35567887742 33445556778899999886 66788999999999887533 22333343322
Q ss_pred -----CCC---hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHH
Q 023070 86 -----FPN---LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCL 156 (287)
Q Consensus 86 -----g~~---~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l 156 (287)
+|. ..+..++++.+++.|+..|.+|...++++.. .+|++.++.+.+.. ++|||++||+.+.+|+.++
T Consensus 139 ~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~---G~d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l- 214 (243)
T 4gj1_A 139 VVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQ---GVNVRLYKLIHEIFPNICIQASGGVASLKDLENL- 214 (243)
T ss_dssp EEC--------CCBHHHHHHHHHTTTCCEEEEEETTC--------CCCHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT-
T ss_pred EEEecCceecccchHHHHHHHHhhcCCcEEEeeeeccccccc---CCCHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-
Confidence 332 2357899999999999999999988887655 37999999999876 7999999999999999875
Q ss_pred HhcCccEEEEehhhhhCccchhc
Q 023070 157 EETGCEGVLSAESLLENPALFAG 179 (287)
Q Consensus 157 ~~~gad~VmiGR~~l~nP~lf~~ 179 (287)
+ .+++||.+|++++.+-.=+.+
T Consensus 215 ~-~~~~gvivg~Al~~g~i~l~e 236 (243)
T 4gj1_A 215 K-GICSGVIVGKALLDGVFSVEE 236 (243)
T ss_dssp T-TTCSEEEECHHHHTTSSCHHH
T ss_pred H-ccCchhehHHHHHCCCCCHHH
Confidence 4 479999999999876554443
No 93
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.13 E-value=4.8e-10 Score=104.94 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=98.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
..|+++.+.+.+..++++.+ .+.|+|.|.+| +.|.. ..++. ++...+-+..+++.+++||.+|- ..
T Consensus 155 g~~v~~~v~~~~~~e~a~~~--~~agad~i~i~-~~~~~----~~~~~-----~~~~~~~i~~l~~~~~~pvi~gg--i~ 220 (393)
T 2qr6_A 155 GEIVAVRVSPQNVREIAPIV--IKAGADLLVIQ-GTLIS----AEHVN-----TGGEALNLKEFIGSLDVPVIAGG--VN 220 (393)
T ss_dssp TSCCEEEECTTTHHHHHHHH--HHTTCSEEEEE-CSSCC----SSCCC-----C-----CHHHHHHHCSSCEEEEC--CC
T ss_pred CCeEEEEeCCccHHHHHHHH--HHCCCCEEEEe-CCccc----cccCC-----CcccHHHHHHHHHhcCCCEEECC--cC
Confidence 56788888876655544333 35689999887 33310 11221 11111224566666799999972 12
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCC--CCcCCCCccccHHHHHHHHhh-------CC---CcEEEecCCCCHHHHHHH
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTR--DEKDGKKFRADWNAIKAVKNA-------LR---IPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~--~~~~~~~~~~~~~~i~~i~~~-------~~---ipVi~nGgI~s~~da~~~ 155 (287)
+ .+.++.+.++|+|+|.| ++.. .......+.+.++.+.++++. ++ +|||++|||++..|+.++
T Consensus 221 t----~e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~ka 295 (393)
T 2qr6_A 221 D----YTTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKA 295 (393)
T ss_dssp S----HHHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHH
T ss_pred C----HHHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHH
Confidence 3 34477888999999999 4311 000112235677778777665 44 999999999999999999
Q ss_pred HHhcCccEEEEehhhhhCcc
Q 023070 156 LEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 156 l~~~gad~VmiGR~~l~nP~ 175 (287)
+. .|||+||+||+++..+.
T Consensus 296 la-lGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 296 IA-CGADAVVLGSPLARAEE 314 (393)
T ss_dssp HH-HTCSEEEECGGGGGSTT
T ss_pred HH-cCCCEEEECHHHHcCCC
Confidence 98 59999999999998886
No 94
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.13 E-value=1.5e-09 Score=100.67 Aligned_cols=144 Identities=13% Similarity=0.163 Sum_probs=117.9
Q ss_pred CEEEEecCCCHHHHHHHHH-HHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC
Q 023070 10 PLFVQFCANDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 85 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~-~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~ 85 (287)
|+-.-+.+.+++.+.++|+ .++ .||+.|.|++||+ +++...++++++++.+ ++++.++.+.
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 4444455678999998887 567 8999999999874 3566778888888876 5899999999
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+|+.++++++++.+++.|+++|. +.. .+.||+..+++++.+++||++.+.+.+++++.++++...+|.|+
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 267 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVE-------QPV---PRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFS 267 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEE-------CCS---CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCcceEe-------CCC---CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEE
Confidence 99999999999999999999873 211 14689999999999999999999999999999999988899999
Q ss_pred EehhhhhCccchh
Q 023070 166 SAESLLENPALFA 178 (287)
Q Consensus 166 iGR~~l~nP~lf~ 178 (287)
+--.-.+...-+.
T Consensus 268 ik~~~~GGit~~~ 280 (370)
T 1nu5_A 268 LKLCNMGGIANTL 280 (370)
T ss_dssp ECHHHHTSHHHHH
T ss_pred EchhhcCCHHHHH
Confidence 9766666655433
No 95
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.12 E-value=2.7e-10 Score=105.53 Aligned_cols=138 Identities=20% Similarity=0.166 Sum_probs=96.6
Q ss_pred CCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHH
Q 023070 18 NDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 18 ~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a 96 (287)
.+++...++..++++|+|.|.||.. .| +++.+.+.++.+++.. ++||.+.. -.+.+.+
T Consensus 105 ~~~~~~~~~~~lieaGvd~I~idta----------~G-----~~~~~~~~I~~ik~~~p~v~Vi~G~------v~t~e~A 163 (366)
T 4fo4_A 105 AAPGNEERVKALVEAGVDVLLIDSS----------HG-----HSEGVLQRIRETRAAYPHLEIIGGN------VATAEGA 163 (366)
T ss_dssp SCTTCHHHHHHHHHTTCSEEEEECS----------CT-----TSHHHHHHHHHHHHHCTTCEEEEEE------ECSHHHH
T ss_pred cChhHHHHHHHHHhCCCCEEEEeCC----------CC-----CCHHHHHHHHHHHHhcCCCceEeee------eCCHHHH
Confidence 3444444444567889999999842 01 4566778888888876 78887752 1234567
Q ss_pred HHHHHcCCCEEEEeccCCCCc-----CCCCccccHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 97 KMLEDAGCSLLAVHGRTRDEK-----DGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~-----~~~~~~~~~~~i~~i~~---~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
+.+.++|+|+|.+ |...... ....+.+++..+.++++ .+++|||+.|||.++.|+.+++. .|||+||+|+
T Consensus 164 ~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala-~GAd~V~vGs 241 (366)
T 4fo4_A 164 RALIEAGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIA-AGASCVMVGS 241 (366)
T ss_dssp HHHHHHTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH-TTCSEEEEST
T ss_pred HHHHHcCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHH-cCCCEEEECh
Confidence 8889999999999 2111100 00112456677776664 46899999999999999999999 5999999999
Q ss_pred hhhhCccchh
Q 023070 169 SLLENPALFA 178 (287)
Q Consensus 169 ~~l~nP~lf~ 178 (287)
.++.-+.-..
T Consensus 242 ~f~~t~Esp~ 251 (366)
T 4fo4_A 242 MFAGTEEAPG 251 (366)
T ss_dssp TTTTBTTSSS
T ss_pred HhhcCCCCCc
Confidence 9998666433
No 96
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.12 E-value=9.1e-10 Score=103.54 Aligned_cols=146 Identities=17% Similarity=0.248 Sum_probs=119.1
Q ss_pred CCCEEEE-ec-C-C-------CHHHHHHHHH-HHcCCCCEEEEec------cC----ChhhhhcCccccccc-CChHHHH
Q 023070 8 DRPLFVQ-FC-A-N-------DPEILLNAAR-RVEPYCDYVDINL------GC----PQRIARRGNYGAFLM-DNLPLVK 65 (287)
Q Consensus 8 ~~p~~~Q-i~-g-~-------~~~~~~~aA~-~~~~g~d~IdiN~------gc----P~~~~~~~~~G~~l~-~~~~~~~ 65 (287)
..|+... +. | . ++++|.++|+ .++.||+.|.|+. |+ |..| ..||++.. ++++...
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~---~~~GG~~~~~~~~~~~ 205 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN---RNYSGLLLADQLKMGE 205 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC---GGGGSCCCHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc---ccccCccchhHHHHHH
Confidence 3466555 65 4 4 8999998887 4577999999996 66 3332 25777664 5778889
Q ss_pred HHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe
Q 023070 66 SLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 66 ~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n 143 (287)
+++++|++++ ++++.++..-+|+.++++++++.+++.|+++|. +.. .+.+|+..+++++.+++||++.
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE-------~P~---~~~~~~~~~~l~~~~~iPIa~d 275 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE-------EPI---HPLNSDNMQKVSRSTTIPIATG 275 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEE-------CSS---CSSCHHHHHHHHHHCSSCEEEC
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEE-------CCC---ChhhHHHHHHHHhhCCCCEEec
Confidence 9999999977 689999999899999999999999999988763 111 1368999999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEE
Q 023070 144 GNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 144 GgI~s~~da~~~l~~~gad~Vmi 166 (287)
+.+.+++++.++++...+|.|++
T Consensus 276 E~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 276 ERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp TTCCTTHHHHHHHHTTCCSEECC
T ss_pred CCcCCHHHHHHHHHcCCCCEEec
Confidence 99999999999999878999987
No 97
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.11 E-value=1.6e-09 Score=100.24 Aligned_cols=142 Identities=13% Similarity=0.148 Sum_probs=118.1
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecC
Q 023070 9 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 85 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~ 85 (287)
.|+-.++.+.+|+++.+.|+ .++.||+.|.+++||+ +++...++++++++.+ ++++.++.+.
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45567788889999988887 4567999999998862 4677788899998876 6899999999
Q ss_pred CCChhhHHHHHHHHHH--cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 86 FPNLQDTIKYAKMLED--AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~--~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+|+.++++++++.+++ .|+++|- +.. .+.||+..+++++.+++||++.+.+.+++++.++++...+|.
T Consensus 195 ~~~~~~a~~~~~~l~~~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~ 264 (366)
T 1tkk_A 195 GWRPKEAVTAIRKMEDAGLGIELVE-------QPV---HKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADL 264 (366)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEEEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSE
T ss_pred CCCHHHHHHHHHHHhhcCCCceEEE-------CCC---CcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCE
Confidence 9999999999999999 8887772 211 146899999999999999999999999999999999888999
Q ss_pred EEEehhhhhCcc
Q 023070 164 VLSAESLLENPA 175 (287)
Q Consensus 164 VmiGR~~l~nP~ 175 (287)
|++--.-.+...
T Consensus 265 v~ik~~~~GGit 276 (366)
T 1tkk_A 265 INIKLMKAGGIS 276 (366)
T ss_dssp EEECHHHHTSHH
T ss_pred EEeehhhhcCHH
Confidence 999655555544
No 98
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.10 E-value=1.4e-09 Score=101.65 Aligned_cols=141 Identities=12% Similarity=0.070 Sum_probs=116.9
Q ss_pred Eec-CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCCh
Q 023070 14 QFC-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 89 (287)
Q Consensus 14 Qi~-g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~ 89 (287)
.+. +.+++++.++|+ ..+.||+.|.|+.|+. .++...++++++++.+ ++++.++.+.+|+.
T Consensus 143 ~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 207 (391)
T 2qgy_A 143 WSDLKKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDL 207 (391)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCH
Confidence 344 578999999887 4567999999997621 1688889999999877 69999999999999
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
++++++++.+++.|+++|- +.. .+.+|+..+++++.+++||++.+.+.+++++.++++...+|.|++-..
T Consensus 208 ~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 277 (391)
T 2qgy_A 208 DQTKSFLKEVSSFNPYWIE-------EPV---DGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDIS 277 (391)
T ss_dssp HHHHHHHHHHGGGCCSEEE-------CSS---CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred HHHHHHHHHHHhcCCCeEe-------CCC---ChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcc
Confidence 9999999999999999873 211 146899999999999999999999999999999999888999999766
Q ss_pred hhhCccchhc
Q 023070 170 LLENPALFAG 179 (287)
Q Consensus 170 ~l~nP~lf~~ 179 (287)
-.+.+.-+.+
T Consensus 278 ~~GGit~~~~ 287 (391)
T 2qgy_A 278 GMGGLIDIIE 287 (391)
T ss_dssp TSSCHHHHHH
T ss_pred hhCCHHHHHH
Confidence 6666654433
No 99
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=99.04 E-value=1.2e-09 Score=102.24 Aligned_cols=140 Identities=11% Similarity=0.136 Sum_probs=115.3
Q ss_pred CCCHHHHHHHHH-HHcCCCCEEEEeccCChh-h-hhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhh
Q 023070 17 ANDPEILLNAAR-RVEPYCDYVDINLGCPQR-I-ARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQD 91 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~-~-~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~ 91 (287)
+.+++++.++|+ ..+.||+.|.|+.||+.. . .....||++..++++...+++++|++.+ ++++.++.+-+|+.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 468999988887 457799999999987431 0 0012466666678899999999999977 6899999998999999
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++++++.+++.|+++|- +.. .+.||+..+++++.+++||++.+.+.+++++.++++...+|.|++
T Consensus 215 a~~~~~~l~~~~i~~iE-------~P~---~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 215 TIRFCRKIGELDICFVE-------EPC---DPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp HHHHHHHHGGGCEEEEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred HHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 99999999999988763 111 135899999999999999999999999999999999878999987
No 100
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.04 E-value=5.8e-09 Score=92.58 Aligned_cols=160 Identities=14% Similarity=0.226 Sum_probs=109.9
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHH-cCCCCEEEEe--ccCCh---hhhhcCccccccc--CChHHHHHHHHHHhhc-cC
Q 023070 8 DRPLFVQFCANDP--EILLNAARRV-EPYCDYVDIN--LGCPQ---RIARRGNYGAFLM--DNLPLVKSLVEKLALN-LN 76 (287)
Q Consensus 8 ~~p~~~Qi~g~~~--~~~~~aA~~~-~~g~d~IdiN--~gcP~---~~~~~~~~G~~l~--~~~~~~~~iv~~v~~~-~~ 76 (287)
...++.-|...|| +.+.+.++.+ +.|+|.|||. |.-|. +.+.+-. -.+|. -+.+.+.++++++++. .+
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~-~~AL~~G~~~~~~~~~v~~ir~~~~~ 95 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGAN-LRSLAAGTTSSDCFDIITKVRAQHPD 95 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 4568888888888 9999999865 5699999998 55565 1222111 00111 3567788999999987 78
Q ss_pred CcEEEEecCCCCh---hhHHHHHHHHHHcCCCEEEEecc--------------------------CC-----------CC
Q 023070 77 VPVSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGR--------------------------TR-----------DE 116 (287)
Q Consensus 77 ~pv~vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~r--------------------------t~-----------~~ 116 (287)
+|+.+-. .++. .....|++.+.++|++.++++.- |. .+
T Consensus 96 ~Pivlm~--Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~g 173 (267)
T 3vnd_A 96 MPIGLLL--YANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEG 173 (267)
T ss_dssp CCEEEEE--CHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCS
T ss_pred CCEEEEe--cCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCC
Confidence 9987652 1111 12356888888888888888431 10 00
Q ss_pred ------cCCCCc-----c-ccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 117 ------KDGKKF-----R-ADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 117 ------~~~~~~-----~-~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
..+.+| + ...+.++++++.+++||++.|||++++++.+.+. .|||+|.+|++++
T Consensus 174 fvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~-~gADgvVVGSaiv 239 (267)
T 3vnd_A 174 YTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIK-AGAAGAISGSAVV 239 (267)
T ss_dssp CEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHH-TTCSEEEECHHHH
T ss_pred cEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHH-cCCCEEEECHHHH
Confidence 011111 1 1247789999888999999999999999998887 4999999999886
No 101
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.03 E-value=7.3e-09 Score=93.21 Aligned_cols=153 Identities=18% Similarity=0.252 Sum_probs=96.8
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
..|+++.+.+ .+.|+ ..+.|+++|+++.++|...... .|..+.+.++.+ +.+++.+++|+.++.+.+
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~--~G~~~~~~~~~i----~~i~~~~~~Pvi~~~~~~ 88 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRAQ--GGVARMSDPKII----KEIMAAVSIPVMAKVRIG 88 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHHT--TCCCCCCCHHHH----HHHHTTCSSCEEEEEETT
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHhh--cCCccCCCHHHH----HHHHHhcCCCeEEEeccC
Confidence 4578877754 33444 3456999999987776643222 255566676654 456666789998876543
Q ss_pred CC------------------------------h----------hhHHHHHHHHHHcCCCEEEEeccCCCC----------
Q 023070 87 PN------------------------------L----------QDTIKYAKMLEDAGCSLLAVHGRTRDE---------- 116 (287)
Q Consensus 87 ~~------------------------------~----------~~~~~~a~~l~~~G~~~I~vh~rt~~~---------- 116 (287)
+. . -...+-+..+.+.|+++|.+||....+
T Consensus 89 ~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~ 168 (297)
T 2zbt_A 89 HFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHAR 168 (297)
T ss_dssp CHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHH
Confidence 20 0 001112233345555555555310000
Q ss_pred -----------c-CC------CCccccHHHHHHHHhhCCCcEE--EecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 117 -----------K-DG------KKFRADWNAIKAVKNALRIPVL--ANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 117 -----------~-~~------~~~~~~~~~i~~i~~~~~ipVi--~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
. .. ...+.+++.++++++.+++||+ +.|||.|++++.++++ .|||+|++|++++..
T Consensus 169 ~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~-aGadgvvvGsai~~~ 244 (297)
T 2zbt_A 169 TMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMH-LGMDGVFVGSGIFKS 244 (297)
T ss_dssp HHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHH-TTCSEEEECGGGGGS
T ss_pred HHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHH-cCCCEEEEchHHhCC
Confidence 0 00 0023467889999988889998 9999999999999998 599999999999853
No 102
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=99.03 E-value=1.9e-09 Score=96.93 Aligned_cols=151 Identities=15% Similarity=0.149 Sum_probs=111.4
Q ss_pred CCCEEEEe---cCCCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCccc-ccccCChHHHHHHHHHHhhccCCcEEEE
Q 023070 8 DRPLFVQF---CANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYG-AFLMDNLPLVKSLVEKLALNLNVPVSCK 82 (287)
Q Consensus 8 ~~p~~~Qi---~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G-~~l~~~~~~~~~iv~~v~~~~~~pv~vK 82 (287)
+.|+++++ +|.+|+...+.++. ++.|+++|.|.-+|..+ +.++.| ..|....+.+.+|-.++....+.++.|.
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k--~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~ 155 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAK--RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIM 155 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSC--CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCc--ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 47999999 88899999998884 56699999999988422 223333 4466555666665555555556677777
Q ss_pred ecCCC----ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCC--CCHHHHHHHH
Q 023070 83 IRVFP----NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNV--RHMEDVQKCL 156 (287)
Q Consensus 83 iR~g~----~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI--~s~~da~~~l 156 (287)
-|... ..+++++-++.++++|++.|.+++. .+++.++++.+.+++|+++|.-. .++..-.+-|
T Consensus 156 aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL 224 (295)
T 1xg4_A 156 ARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI-----------TELAMYRQFADAVQVPILANITEFGATPLFTTDEL 224 (295)
T ss_dssp EEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC-----------CSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHH
T ss_pred EecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC-----------CCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHH
Confidence 77643 2368889999999999999999865 25688999999999999988754 2333333455
Q ss_pred HhcCccEEEEehhhh
Q 023070 157 EETGCEGVLSAESLL 171 (287)
Q Consensus 157 ~~~gad~VmiGR~~l 171 (287)
.+.|++.|++|.+++
T Consensus 225 ~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 225 RSAHVAMALYPLSAF 239 (295)
T ss_dssp HHTTCSEEEESSHHH
T ss_pred HHcCCCEEEEChHHH
Confidence 568999999998876
No 103
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.01 E-value=5.6e-09 Score=96.28 Aligned_cols=143 Identities=13% Similarity=0.117 Sum_probs=99.2
Q ss_pred CEEEEecCCCHHHHHHHHHHHcC--CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 10 PLFVQFCANDPEILLNAARRVEP--YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~~--g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
++.+.+ |..++++.++..+++. |+|.|.+++. .| ++..+.+.++.+++.. ++||.+|.-
T Consensus 108 ~v~~~~-g~~~~~~~~~~~l~~~~~g~~~i~i~~~----------~g-----~~~~~~~~i~~lr~~~~~~~vi~g~v-- 169 (351)
T 2c6q_A 108 HLAASS-GTGSSDFEQLEQILEAIPQVKYICLDVA----------NG-----YSEHFVEFVKDVRKRFPQHTIMAGNV-- 169 (351)
T ss_dssp TEEEEE-CSSHHHHHHHHHHHHHCTTCCEEEEECS----------CT-----TBHHHHHHHHHHHHHCTTSEEEEEEE--
T ss_pred eeEeec-CCChHHHHHHHHHHhccCCCCEEEEEec----------CC-----CcHHHHHHHHHHHHhcCCCeEEEEeC--
Confidence 456665 5567777777666665 8999888742 12 4556778899999888 899998731
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCC--CC-cC-CCCccccHHHHHHH---HhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTR--DE-KD-GKKFRADWNAIKAV---KNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~--~~-~~-~~~~~~~~~~i~~i---~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
.+.+.++.+.++|+|+|.|..... .. +. ...+.+.+..+..+ .+..++|||+.|||+++.|+.++|. .
T Consensus 170 ----~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAla-l 244 (351)
T 2c6q_A 170 ----VTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFG-A 244 (351)
T ss_dssp ----CSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHH-T
T ss_pred ----CCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHH-c
Confidence 124567889999999998842110 00 00 00112334444444 3445899999999999999999999 5
Q ss_pred CccEEEEehhhhhCcc
Q 023070 160 GCEGVLSAESLLENPA 175 (287)
Q Consensus 160 gad~VmiGR~~l~nP~ 175 (287)
|||+|++||.++.-+.
T Consensus 245 GA~~V~vG~~fl~~~E 260 (351)
T 2c6q_A 245 GADFVMLGGMLAGHSE 260 (351)
T ss_dssp TCSEEEESTTTTTBTT
T ss_pred CCCceeccHHHhcCcc
Confidence 9999999999986433
No 104
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.01 E-value=3.8e-09 Score=99.06 Aligned_cols=136 Identities=16% Similarity=0.188 Sum_probs=110.1
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEec------cCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCCh
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINL------GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 89 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~------gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~ 89 (287)
+++++.++|+ .++.||+.|.|+. |++... ...|....++++...+++++|++++ ++++.++.+-+|+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~ 222 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL 222 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 8999998887 4577999999996 664211 1122222356788889999999877 68999999989999
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++++++++.+++.|+++|- +.. .+.||+..+++++.+++||++.+.+.+++++.++++...+|.|++-
T Consensus 223 ~~ai~~~~~l~~~~i~~iE-------~P~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 290 (403)
T 2ox4_A 223 VSAIQFAKAIEEFNIFFYE-------EIN---TPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPD 290 (403)
T ss_dssp HHHHHHHHHHGGGCEEEEE-------CCS---CTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHHHHhhCCCEEe-------CCC---ChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999988763 211 1358899999999999999999999999999999998789999883
No 105
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.01 E-value=5.1e-09 Score=97.98 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=107.0
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
++++|.++|+ ..+.||+.|.|+.|- .+++...+++++|++.+ ++++.++.+-+|+.++++++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~ 226 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRM 226 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHH
Confidence 8999999887 457799999998751 25788889999999886 68999999999999999999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++.+++.|+++|. +.. .+.+|+..+++++.+++||++.+.+.+++++.++++...||.|++-
T Consensus 227 ~~~l~~~~i~~iE-------~P~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 227 CRIFEPFNLVWIE-------EPL---DAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp HHHHGGGCCSCEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHhhCCCEEE-------CCC---CcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 9999999999873 211 1368999999999999999999999999999999998889999884
No 106
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.00 E-value=1.4e-08 Score=88.69 Aligned_cols=147 Identities=17% Similarity=0.223 Sum_probs=107.1
Q ss_pred CCEEEEecC-CCHHHHHHHHHHHcC---CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 023070 9 RPLFVQFCA-NDPEILLNAARRVEP---YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 84 (287)
Q Consensus 9 ~p~~~Qi~g-~~~~~~~~aA~~~~~---g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR 84 (287)
..+..+-.| .+.++.+..|++..+ +-+.|.|-.-. + --.++.|+....+..+.+.+. ++.|..-+
T Consensus 74 ~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~-------d--~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~- 142 (265)
T 1wv2_A 74 YTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLA-------D--QKTLFPNVVETLKAAEQLVKD-GFDVMVYT- 142 (265)
T ss_dssp SEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBS-------C--TTTCCBCHHHHHHHHHHHHTT-TCEEEEEE-
T ss_pred CEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeec-------C--ccccCcCHHHHHHHHHHHHHC-CCEEEEEe-
Confidence 345555555 588999999997755 56777776321 1 125677888777777776543 44444222
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
.+...+++++++.|++.+..++..... ..+-.+++.++.+++..++|||+.|||.+++|+..+++ .|||+|
T Consensus 143 -----~dd~~~akrl~~~G~~aVmPlg~pIGs---G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Ame-LGAdgV 213 (265)
T 1wv2_A 143 -----SDDPIIARQLAEIGCIAVMPLAGLIGS---GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAME-LGCEAV 213 (265)
T ss_dssp -----CSCHHHHHHHHHSCCSEEEECSSSTTC---CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHH-HTCSEE
T ss_pred -----CCCHHHHHHHHHhCCCEEEeCCccCCC---CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHH-cCCCEE
Confidence 122578999999999999777763221 22346899999999999999999999999999999999 599999
Q ss_pred EEehhhhh--Ccc
Q 023070 165 LSAESLLE--NPA 175 (287)
Q Consensus 165 miGR~~l~--nP~ 175 (287)
++|+++.. ||.
T Consensus 214 lVgSAI~~a~dP~ 226 (265)
T 1wv2_A 214 LMNTAIAHAKDPV 226 (265)
T ss_dssp EESHHHHTSSSHH
T ss_pred EEChHHhCCCCHH
Confidence 99999853 454
No 107
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.00 E-value=6.6e-09 Score=97.31 Aligned_cols=140 Identities=14% Similarity=0.210 Sum_probs=114.4
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
..|+...++..+++.+.++|+ .++.||+.|.|+.|+ +++...+++++|++.+ ++++.++.+
T Consensus 134 ~vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan 197 (397)
T 2qde_A 134 RIPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDIN 197 (397)
T ss_dssp SEEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECT
T ss_pred CcceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECC
Confidence 345555554478999998887 456799999999762 4677788999999876 689999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
-+|+.++++++++.+++.|+++|- +.- .+.+|+..+++++.+++||++.+.+.+++++.++++...+|.|
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 267 (397)
T 2qde_A 198 GAWTYDQALTTIRALEKYNLSKIE-------QPL---PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGL 267 (397)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSCEE-------CCS---CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEE-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 899999999999999999999873 211 1368999999999999999999999999999999998889999
Q ss_pred EEehhhhhC
Q 023070 165 LSAESLLEN 173 (287)
Q Consensus 165 miGR~~l~n 173 (287)
++--.-.+.
T Consensus 268 ~ik~~~~GG 276 (397)
T 2qde_A 268 MIKTQKAGG 276 (397)
T ss_dssp EECHHHHTS
T ss_pred EEeccccCC
Confidence 985444433
No 108
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.00 E-value=8.7e-10 Score=96.66 Aligned_cols=89 Identities=19% Similarity=0.329 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.++.++++.++++|++.|+++..+.... ....+++.++++++.+++||+++|||++++++.++++ .|||+|++|++
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~-~Gad~V~lg~~ 105 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE---KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELIL-RGADKVSINTA 105 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS---HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHH-TTCSEEEESHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc---CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHH-cCCCEEEEChH
Confidence 4788999999999999999997654321 1246788899999999999999999999999999998 59999999999
Q ss_pred hhhCccchhchhh
Q 023070 170 LLENPALFAGFRT 182 (287)
Q Consensus 170 ~l~nP~lf~~~~~ 182 (287)
++.+|+++.++..
T Consensus 106 ~l~~p~~~~~~~~ 118 (253)
T 1thf_D 106 AVENPSLITQIAQ 118 (253)
T ss_dssp HHHCTHHHHHHHH
T ss_pred HHhChHHHHHHHH
Confidence 9999998887653
No 109
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.00 E-value=1.7e-09 Score=91.93 Aligned_cols=138 Identities=14% Similarity=0.222 Sum_probs=93.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
+.|+++.+.+.+++++.+.++.+ +.|++.|++++.||.. .+.++.+++.. ++++.+-
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~-- 68 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAG-- 68 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEE--
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEec--
Confidence 46899999999999999998865 4589999999987632 23455555443 2333332
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCC-------------------CCc-------------CCCC-ccccHHHHHH
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTR-------------------DEK-------------DGKK-FRADWNAIKA 131 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~-------------------~~~-------------~~~~-~~~~~~~i~~ 131 (287)
.-.+.+ -++.+.+.|+|+| +++... ... ...+ ....++.+++
T Consensus 69 ~v~~~~----~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~ 143 (205)
T 1wa3_A 69 TVTSVE----QCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKA 143 (205)
T ss_dssp SCCSHH----HHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHH
T ss_pred ccCCHH----HHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHH
Confidence 111222 2455566788877 654432 000 0000 0123567888
Q ss_pred HHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 132 VKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 132 i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+++.+ ++||++.|||+ ++++.++++ .|+|+|.+|++++.
T Consensus 144 l~~~~~~~pvia~GGI~-~~~~~~~~~-~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 144 MKGPFPNVKFVPTGGVN-LDNVCEWFK-AGVLAVGVGSALVK 183 (205)
T ss_dssp HHTTCTTCEEEEBSSCC-TTTHHHHHH-HTCSCEEECHHHHC
T ss_pred HHHhCCCCcEEEcCCCC-HHHHHHHHH-CCCCEEEECccccC
Confidence 88877 89999999996 789999998 59999999999987
No 110
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.99 E-value=8.7e-09 Score=96.99 Aligned_cols=147 Identities=10% Similarity=0.046 Sum_probs=118.8
Q ss_pred CCCCEEEE-ecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 023070 7 EDRPLFVQ-FCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 82 (287)
Q Consensus 7 ~~~p~~~Q-i~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vK 82 (287)
+..|+-.. +...+|+.+++.|+ .++.||+.|.|++|++-. + |+ ++++...+++++||+.+ ++++.++
T Consensus 166 ~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vD 236 (412)
T 3stp_A 166 DRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLE 236 (412)
T ss_dssp SSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 34566555 45578999999888 457799999999987521 1 22 45677888999999887 6899999
Q ss_pred ecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
.+-+|+.++++++++.+++.|+.+|- +.-. +.|++.++++++.+++||++.+.+.++.++.++++...+|
T Consensus 237 aN~~~~~~~Ai~~~~~Le~~~i~~iE-------eP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D 306 (412)
T 3stp_A 237 CYMGWNLDYAKRMLPKLAPYEPRWLE-------EPVI---ADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVS 306 (412)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCCSEEE-------CCSC---TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEE-------CCCC---cccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999883 2111 3588999999999999999999999999999999987899
Q ss_pred EEEEehhhhh
Q 023070 163 GVLSAESLLE 172 (287)
Q Consensus 163 ~VmiGR~~l~ 172 (287)
.|++--+-.+
T Consensus 307 ~v~ik~~~~G 316 (412)
T 3stp_A 307 VLQYDTNRVG 316 (412)
T ss_dssp EECCCHHHHT
T ss_pred EEecChhhcC
Confidence 9988544443
No 111
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.99 E-value=1.6e-08 Score=94.40 Aligned_cols=123 Identities=9% Similarity=0.088 Sum_probs=105.4
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
+++++.++|+ .++.||+.|.|++|+ .+++...+++++|++.+ ++++.+..+-+|+.++++++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~ 209 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTK 209 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHH
Confidence 8999998887 457799999999876 24577789999999987 68999999989999999999
Q ss_pred HHHHHH--cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 96 AKMLED--AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 96 a~~l~~--~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++.+++ .++.+|- +.. .+.||+..+++++.+ ++||++.+.+ +++++.++++...+|.|++.
T Consensus 210 ~~~l~~~g~~i~~iE-------qP~---~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 210 LVAIREAGHDLLWVE-------DPI---LRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHHHTTCCCSEEE-------SCB---CTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhcCCCceEEe-------CCC---CCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 7777652 211 135899999999999 9999999999 99999999998889999997
No 112
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.98 E-value=8.6e-09 Score=97.64 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=119.5
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccc-cccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGA-FLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~-~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
.+|+++++.|+ .++.||..|.++.|+|.... .|. ...++++...+++++||+.+ ++++.++.+-+|+.+++.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~ 220 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAI 220 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHH
Confidence 68999999887 56789999999999986421 222 12235677888999999887 589999999899999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
++++.+++.|+.+|. +. . .+.+++.++++++.+++||++.+.+.++.++.++++...+|.|++--+-.+.
T Consensus 221 ~~~~~Le~~~i~~iE-------eP--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GG 290 (433)
T 3rcy_A 221 RLGQAIEPYSPLWYE-------EP--V-PPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGG 290 (433)
T ss_dssp HHHHHHGGGCCSEEE-------CC--S-CTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTH
T ss_pred HHHHHhhhcCCCEEE-------CC--C-ChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCC
Confidence 999999999999884 11 1 1357899999999999999999999999999999998789999987665555
Q ss_pred ccchhc
Q 023070 174 PALFAG 179 (287)
Q Consensus 174 P~lf~~ 179 (287)
..-..+
T Consensus 291 it~~~k 296 (433)
T 3rcy_A 291 IWEMKK 296 (433)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 543333
No 113
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.98 E-value=1.2e-09 Score=95.75 Aligned_cols=89 Identities=21% Similarity=0.346 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.++.++++.+++.|++.|.++..+.... ....+++.++++++.+++||+++|||++++++.++++ .|||+|++|++
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~-~Gad~V~lg~~ 106 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHE---ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLL-SGADKVSVNSA 106 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTT---CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHH-HTCSEEEECHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcccc---CccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHH-cCCCEEEEChH
Confidence 4788999999999999999997654321 1245788899999999999999999999999999998 48999999999
Q ss_pred hhhCccchhchhh
Q 023070 170 LLENPALFAGFRT 182 (287)
Q Consensus 170 ~l~nP~lf~~~~~ 182 (287)
++.+|+++.++..
T Consensus 107 ~l~~p~~~~~~~~ 119 (252)
T 1ka9_F 107 AVRRPELIRELAD 119 (252)
T ss_dssp HHHCTHHHHHHHH
T ss_pred HHhCcHHHHHHHH
Confidence 9999998887653
No 114
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.96 E-value=1e-08 Score=96.32 Aligned_cols=134 Identities=19% Similarity=0.234 Sum_probs=111.4
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEec----cCChhhhhcCccccccc--CChHHHHHHHHHHhhcc--CCcEEEEecCCCCh
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINL----GCPQRIARRGNYGAFLM--DNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 89 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~----gcP~~~~~~~~~G~~l~--~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~ 89 (287)
+|+.+.+.|+ .++.||+.|.++. |+.... ||+.+. ++++...+++++|++++ ++++.++..-+|+.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~-----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRD-----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSC-----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC-----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 7999988887 5577999999998 653221 555555 47788899999999876 58899999889999
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++++++++.+++.|+++|- +.. .+.||+..+++++.+++||++.+.+.+++++.++++...+|.|++-
T Consensus 224 ~~a~~~~~~l~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 224 PSSIRFARAMEPFGLLWLE-------EPT---PPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp HHHHHHHHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred HHHHHHHHHHhhcCCCeEE-------CCC---ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999874 111 1367999999999999999999999999999999998789999873
No 115
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.95 E-value=1.2e-08 Score=95.49 Aligned_cols=124 Identities=11% Similarity=0.082 Sum_probs=106.8
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
+++++.+.|+ ..+.||+.|.|+.|. .+++...+++++|++.+ ++++.++.+-+|+.++++++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~ 239 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRM 239 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHH
Confidence 8999998887 457799999999763 35788889999999886 68999999999999999999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++.+++.|+++|- +.. .+.+|+..+++++.+++||++.+.+.+++++.++++...+|.|++-
T Consensus 240 ~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 240 GRKMEQFNLIWIE-------EPL---DAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp HHHHGGGTCSCEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHcCCceee-------CCC---ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999873 211 1368999999999999999999999999999999998889999884
No 116
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.95 E-value=1e-08 Score=96.22 Aligned_cols=135 Identities=18% Similarity=0.238 Sum_probs=108.9
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEec------cCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCCh
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINL------GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 89 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~------gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~ 89 (287)
++++|.++|+ .++.||+.|.|+. |++.. +...|....++++...+++++|++++ ++++.++..-+|+.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~---s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQ---QNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSC---SCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcccc---CcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 8999998887 4577999999996 54311 11112222346678889999999876 68999999989999
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++++++++.+++.|+++|- +.. .+.+|+..+++++.+++||++.+.+.+++++.++++...+|.|++
T Consensus 229 ~~a~~~~~~l~~~~i~~iE-------~P~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYYE-------EPV---MPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHHHHGGGCCSCEE-------CSS---CSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHHhcCCCEEe-------CCC---ChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 9999999999999999873 111 136899999999999999999999999999999999878999987
No 117
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.93 E-value=1.3e-08 Score=95.52 Aligned_cols=149 Identities=11% Similarity=0.056 Sum_probs=120.2
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
+..|+-..+.+.+|+++++.++ .++.||..|.| .|+|.... .....+++...+++++||+.+ ++++.+..
T Consensus 113 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDa 185 (405)
T 3rr1_A 113 DKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDF 185 (405)
T ss_dssp SCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEEC
T ss_pred CceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 4567778888899999999887 56789999999 88874210 111234566788899999887 68999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+-+|+.++++++++.+++.|+.+|. +.- .+.|++.++++++.+++||++.+.+.++.++.++++...+|.
T Consensus 186 N~~~~~~~A~~~~~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~ 255 (405)
T 3rr1_A 186 HGRVSAPMAKVLIKELEPYRPLFIE-------EPV---LAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSI 255 (405)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSCEE-------CSS---CCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCe
Confidence 9999999999999999999999883 211 135788999999999999999999999999999999888999
Q ss_pred EEEehhhhh
Q 023070 164 VLSAESLLE 172 (287)
Q Consensus 164 VmiGR~~l~ 172 (287)
|++--+-.+
T Consensus 256 v~~d~~~~G 264 (405)
T 3rr1_A 256 LQPDLSHAG 264 (405)
T ss_dssp ECCBTTTTT
T ss_pred EEEChhhcC
Confidence 998544443
No 118
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.92 E-value=1.3e-08 Score=94.86 Aligned_cols=134 Identities=10% Similarity=0.154 Sum_probs=110.1
Q ss_pred CCEEEEecC--CCH---HHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEE
Q 023070 9 RPLFVQFCA--NDP---EILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVS 80 (287)
Q Consensus 9 ~p~~~Qi~g--~~~---~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~ 80 (287)
.|+-..+++ .+| +.+.+.|+ .++.||+.|.|+.|+ .+++...++++++++.+ ++++.
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~ 188 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMI 188 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEE
Confidence 355444433 678 99988877 457799999999875 24677889999999877 68999
Q ss_pred EEecCCCChhhHHHHHHHHHHc-CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 81 CKIRVFPNLQDTIKYAKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 81 vKiR~g~~~~~~~~~a~~l~~~-G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
++.+-+|+.++++++++.+++. |+++|- +.. .+.+|+..+++++.+++||++.+.+.+++++.++++..
T Consensus 189 vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 258 (382)
T 2gdq_A 189 LDANQSYDAAAAFKWERYFSEWTNIGWLE-------EPL---PFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQR 258 (382)
T ss_dssp EECTTCCCHHHHHTTHHHHTTCSCEEEEE-------CCS---CSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHHHhhccCCeEEE-------CCC---CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 9999999999999999999999 888763 211 13689999999999999999999999999999999987
Q ss_pred CccEEEEe
Q 023070 160 GCEGVLSA 167 (287)
Q Consensus 160 gad~VmiG 167 (287)
.+|.|++-
T Consensus 259 ~~d~v~ik 266 (382)
T 2gdq_A 259 CLDIIQPD 266 (382)
T ss_dssp CCSEECCC
T ss_pred CCCEEecC
Confidence 89999873
No 119
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.92 E-value=1e-08 Score=96.23 Aligned_cols=161 Identities=8% Similarity=0.063 Sum_probs=123.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhh--c----Cccccccc--CChHHHHHHHHHHhhcc--
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR--R----GNYGAFLM--DNLPLVKSLVEKLALNL-- 75 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~--~----~~~G~~l~--~~~~~~~~iv~~v~~~~-- 75 (287)
+..|+-..+.+.+|+++++.++ .++.||..|.+++|++..... . ..-|..+. +.++...+++++||+++
T Consensus 121 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~ 200 (401)
T 3sbf_A 121 DAIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN 200 (401)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC
Confidence 4456666778899999999887 567899999999997531100 0 01122221 22567788899999887
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~ 155 (287)
++++.++.+-+|+.++++++++.+++.|+.+|. +.- .+.+++.++++++.+++||++.+.+.+++++.++
T Consensus 201 d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 270 (401)
T 3sbf_A 201 QFHILHDVHERLFPNQAIQFAKEVEQYKPYFIE-------DIL---PPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSL 270 (401)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE-------CSS---CTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---ChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHH
Confidence 689999999999999999999999999998884 211 1357888899999999999999999999999999
Q ss_pred HHhcCccEEEEehhhhhCccch
Q 023070 156 LEETGCEGVLSAESLLENPALF 177 (287)
Q Consensus 156 l~~~gad~VmiGR~~l~nP~lf 177 (287)
++...+|.|++--+-.+...-.
T Consensus 271 i~~~~~d~v~~k~~~~GGit~~ 292 (401)
T 3sbf_A 271 IANRRIDFIRCHVSQIGGITPA 292 (401)
T ss_dssp HHTTCCSEECCCGGGGTSHHHH
T ss_pred HhcCCCCEEecCccccCCHHHH
Confidence 9988899999866555555433
No 120
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.91 E-value=2e-08 Score=93.86 Aligned_cols=125 Identities=17% Similarity=0.152 Sum_probs=106.6
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
+++.+.+.|+ .++.||+.|.|+.|+ .+++...++++++++.+ ++++.+..+-+|+.++++++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 229 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGG---------------APIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAY 229 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSS---------------SCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHH
Confidence 8999988887 456799999999886 24677788999998876 68999999999999999999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc----CccEEEEeh
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET----GCEGVLSAE 168 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~----gad~VmiGR 168 (287)
++.+++.|+++|- +... +.||+..+++++.+++||++.+.+.+++++.++++.. .+|.|++--
T Consensus 230 ~~~l~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 230 AKMLRDYPLFWYE-------EVGD---PLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp HHHHTTSCCSEEE-------CCSC---TTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred HHHHHHcCCCeec-------CCCC---hhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 9999999999873 2111 4689999999999999999999999999999999986 699998843
No 121
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.91 E-value=3.5e-08 Score=87.58 Aligned_cols=158 Identities=15% Similarity=0.209 Sum_probs=107.7
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHH-cCCCCEEEEec--cCCh---hhhh-----cCcccccccCChHHHHHHHHHHhhc
Q 023070 8 DRPLFVQFCANDP--EILLNAARRV-EPYCDYVDINL--GCPQ---RIAR-----RGNYGAFLMDNLPLVKSLVEKLALN 74 (287)
Q Consensus 8 ~~p~~~Qi~g~~~--~~~~~aA~~~-~~g~d~IdiN~--gcP~---~~~~-----~~~~G~~l~~~~~~~~~iv~~v~~~ 74 (287)
+..++.-|...+| +.+.+.++.+ +.|+|.|+|+. .-|. +.+. .-..| -+.....++++++++.
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G----~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAG----VTPAQCFEMLAIIREK 91 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhc
Confidence 4557888888888 8888888755 56899999974 3332 0111 01112 1566778999999988
Q ss_pred -cCCcEEEEecCCCCh---hhHHHHHHHHHHcCCCEEEEeccCCC---------------------C-------------
Q 023070 75 -LNVPVSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRD---------------------E------------- 116 (287)
Q Consensus 75 -~~~pv~vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~---------------------~------------- 116 (287)
+++||.+=. .++. .....+++.+.++|++++++|.-+.+ .
T Consensus 92 ~~~~Pv~lm~--y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~ 169 (268)
T 1qop_A 92 HPTIPIGLLM--YANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASY 169 (268)
T ss_dssp CSSSCEEEEE--CHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHH
T ss_pred CCCCCEEEEE--cccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhh
Confidence 789986511 0111 12256788888888888888532110 0
Q ss_pred ---------cCCCCc------cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 117 ---------KDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 117 ---------~~~~~~------~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
..+.+| +...+.++++++.+++||++.|||+|++++.+++. .|||+|++|++++.
T Consensus 170 ~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~-agAD~vVVGSai~~ 239 (268)
T 1qop_A 170 GRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVR-AGAAGAISGSAIVK 239 (268)
T ss_dssp CCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred CCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHH-cCCCEEEEChHHhh
Confidence 001111 12368899999988999999999999999999887 48999999999864
No 122
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.91 E-value=4.2e-08 Score=91.46 Aligned_cols=143 Identities=12% Similarity=0.167 Sum_probs=117.4
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
..|+...+...+|+.+.+.++ .++. ||..+.+++|++ +++.-.+++++|++.+ ++++.++.
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDa 201 (383)
T 3i4k_A 137 KVDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDI 201 (383)
T ss_dssp EEEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEEC
T ss_pred eEEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 346666777889999887666 5676 999999998752 4666778899999987 58999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+.+|+.+++.++++.+++.|+.+|. +.- .+.|++.++++++.+++||.+.+.+.+++++.++++...+|.
T Consensus 202 n~~~~~~~A~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 271 (383)
T 3i4k_A 202 NARWDRRTALHYLPILAEAGVELFE-------QPT---PADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADV 271 (383)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEE-------SCS---CTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCE
Confidence 9999999999999999999999884 211 135789999999999999999999999999999999888999
Q ss_pred EEEehhhhhCcc
Q 023070 164 VLSAESLLENPA 175 (287)
Q Consensus 164 VmiGR~~l~nP~ 175 (287)
|++--+-.+...
T Consensus 272 v~~k~~~~GGit 283 (383)
T 3i4k_A 272 IALKTTKHGGLL 283 (383)
T ss_dssp EEECTTTTTSHH
T ss_pred EEEcccccCCHH
Confidence 999654444433
No 123
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.90 E-value=1e-08 Score=91.15 Aligned_cols=160 Identities=14% Similarity=0.233 Sum_probs=103.9
Q ss_pred CCCEEEEecCCC--HHHHHHHHHHH-cCCCCEEEEe--ccCCh---hhhhcCccccccc--CChHHHHHHHHHHhhc-cC
Q 023070 8 DRPLFVQFCAND--PEILLNAARRV-EPYCDYVDIN--LGCPQ---RIARRGNYGAFLM--DNLPLVKSLVEKLALN-LN 76 (287)
Q Consensus 8 ~~p~~~Qi~g~~--~~~~~~aA~~~-~~g~d~IdiN--~gcP~---~~~~~~~~G~~l~--~~~~~~~~iv~~v~~~-~~ 76 (287)
...++.=|...+ .+...+.++.+ +.|+|.|||. |.-|. +..++- .-.+|. -+.+.+.++++++++. .+
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a-~~rAL~~G~~~~~~~~~v~~~r~~~~~ 97 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGA-NLRALAAKTTPDICFELIAQIRARNPE 97 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHH-HHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHH-HHHHHHcCCCHHHHHHHHHHHHhcCCC
Confidence 345666666555 57888888855 5699999998 45555 112210 001111 2566788999999987 78
Q ss_pred CcEEEEecCCCCh---hhHHHHHHHHHHcCCCEEEEec--------------------------cCCCC-----------
Q 023070 77 VPVSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHG--------------------------RTRDE----------- 116 (287)
Q Consensus 77 ~pv~vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~--------------------------rt~~~----------- 116 (287)
+|+.+-. .++. .....|++.+.++|++.+++.. .+...
T Consensus 98 ~Pivlm~--Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~g 175 (271)
T 3nav_A 98 TPIGLLM--YANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKG 175 (271)
T ss_dssp SCEEEEE--CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCS
T ss_pred CCEEEEe--cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCC
Confidence 9998742 1111 1234677777777777776621 11000
Q ss_pred ------cCCCCcc-----c-cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 117 ------KDGKKFR-----A-DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 117 ------~~~~~~~-----~-~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
..+.+|. . ..+.++++++.+++||++.+||++++++.+.+. .|||||.+|++++
T Consensus 176 fiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~-~gADgvIVGSAiv 241 (271)
T 3nav_A 176 YTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIE-AGAAGAISGSAVV 241 (271)
T ss_dssp CEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHH-TTCSEEEESHHHH
T ss_pred eEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH-cCCCEEEECHHHH
Confidence 0011111 1 246788999988999999999999999998887 4899999999986
No 124
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.90 E-value=1.3e-08 Score=93.97 Aligned_cols=138 Identities=12% Similarity=0.076 Sum_probs=114.9
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
..|+..+++..+|+.+.+.++ .++.||..|.+++|| +++.-.+.++++++.+ ++++.++.+
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 192 (356)
T 3ro6_B 129 SLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPN 192 (356)
T ss_dssp CEEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred ceeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 346667888889999998777 567899999999875 3566677888888876 689999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc-CccE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET-GCEG 163 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~-gad~ 163 (287)
.+|+.+++.++++.+++.|+.+|- +... +.|++.++++++.+++||.+++.+.+++++.++++.. .+|.
T Consensus 193 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~ 262 (356)
T 3ro6_B 193 QSYDRDGLLRLDRLVQELGIEFIE-------QPFP---AGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGI 262 (356)
T ss_dssp TCCCHHHHHHHHHHHHHTTCCCEE-------CCSC---TTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------CCCC---CCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCE
Confidence 999999999999999999999883 2111 3588999999888899999999999999999999977 7999
Q ss_pred EEEehhhh
Q 023070 164 VLSAESLL 171 (287)
Q Consensus 164 VmiGR~~l 171 (287)
|++--+-.
T Consensus 263 v~~k~~~~ 270 (356)
T 3ro6_B 263 FNIKLMKC 270 (356)
T ss_dssp EEECHHHH
T ss_pred EEEccccc
Confidence 99854443
No 125
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.89 E-value=1.3e-08 Score=94.61 Aligned_cols=126 Identities=11% Similarity=0.098 Sum_probs=107.4
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCC-hhhHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPN-LQDTIK 94 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~-~~~~~~ 94 (287)
+++++++.|+ .++.||+.|.|++||+ | .+++...+.+++||+.+ ++++.++.+-+|+ .+++++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~ 212 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAM 212 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHH
Confidence 3488888777 5677999999999975 2 25788889999999886 6899999999999 999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+++.+++.|+.+|. +.- .+.+++.++++++.+++||++.+.+.+++++.++++...+|.|++-
T Consensus 213 ~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 275 (374)
T 3sjn_A 213 MAKRLEEFNLNWIE-------EPV---LADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPD 275 (374)
T ss_dssp HHHHSGGGCCSEEE-------CSS---CTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCB
T ss_pred HHHHhhhcCceEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999883 211 1358899999999999999999999999999999998889999874
No 126
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.89 E-value=9.1e-09 Score=97.07 Aligned_cols=157 Identities=13% Similarity=0.061 Sum_probs=120.2
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcC----c-------------ccccccCChHHHHHHH
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRG----N-------------YGAFLMDNLPLVKSLV 68 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~----~-------------~G~~l~~~~~~~~~iv 68 (287)
+..|+-..+.+.+|+++++.++ .++.||..|.+++|+|......+ . .+-...++++...+++
T Consensus 131 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v 210 (418)
T 3r4e_A 131 DGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLF 210 (418)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 4456666677899999999887 56789999999999975221100 0 0011112356778889
Q ss_pred HHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCC
Q 023070 69 EKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNV 146 (287)
Q Consensus 69 ~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI 146 (287)
++||+.+ ++++.++.+-+|+.++++++++.+++.|+.+|. +.. .+.+++.++++++.+++||++.+.+
T Consensus 211 ~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~ 280 (418)
T 3r4e_A 211 EELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DCT---PAENQEAFRLVRQHTVTPLAVGEIF 280 (418)
T ss_dssp HHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SCS---CCSSGGGGHHHHHHCCSCEEECTTC
T ss_pred HHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC---CccCHHHHHHHHhcCCCCEEEcCCc
Confidence 9999987 689999999999999999999999999999884 211 1357888899999999999999999
Q ss_pred CCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 147 RHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 147 ~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
.+++++.++++...+|.|++--+-.+.
T Consensus 281 ~~~~~~~~~l~~~a~d~v~~k~~~~GG 307 (418)
T 3r4e_A 281 NTIWDAKDLIQNQLIDYIRATVVGAGG 307 (418)
T ss_dssp CSGGGTHHHHHTTCCSEECCCTTTTTH
T ss_pred CCHHHHHHHHHcCCCCeEecCccccCC
Confidence 999999999998789999885444433
No 127
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.86 E-value=1.1e-07 Score=87.24 Aligned_cols=132 Identities=18% Similarity=0.150 Sum_probs=109.0
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 9 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
.|+-..+.+.+++++.+.|+ .++.||+.|.|+.|+ +++...+++++|++.- ++++.+..+-+
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~g~~~~l~vDan~~ 192 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKVTRGAKYIVDANMG 192 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHSTTCEEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 45555677779999988887 567899999999764 4566677888888762 47888888888
Q ss_pred CChhhHHHHHHHHHHcCCC--EEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 87 PNLQDTIKYAKMLEDAGCS--LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~--~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
|+.++++++++.+++.|++ +|- +. . .+.|++..+++++.+++||.+.+.+.+++++.++++...+|.|
T Consensus 193 ~~~~~a~~~~~~l~~~~i~~~~iE-------~P--~-~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v 262 (345)
T 2zad_A 193 YTQKEAVEFARAVYQKGIDIAVYE-------QP--V-RREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYV 262 (345)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEE-------CC--S-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHHhcCCCeeeee-------CC--C-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEE
Confidence 9999999999999999999 763 21 1 1368999999999999999999999999999999998889999
Q ss_pred EE
Q 023070 165 LS 166 (287)
Q Consensus 165 mi 166 (287)
++
T Consensus 263 ~i 264 (345)
T 2zad_A 263 NI 264 (345)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 128
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.85 E-value=6e-08 Score=90.72 Aligned_cols=144 Identities=15% Similarity=0.087 Sum_probs=117.7
Q ss_pred CCCCEEEEec---CCCHHHHHHHH-H-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcE
Q 023070 7 EDRPLFVQFC---ANDPEILLNAA-R-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPV 79 (287)
Q Consensus 7 ~~~p~~~Qi~---g~~~~~~~~aA-~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv 79 (287)
+..|+-..+. ..+|+++++.+ + .++.||..|.++.|++.+. ...+++.-.+.+++|++.+ ++++
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l 194 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVI 194 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCE
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeE
Confidence 3456666653 36899998877 6 5667999999999987532 2457888889999999886 6899
Q ss_pred EEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc
Q 023070 80 SCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 80 ~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
.++.+-+|+.++++++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+.+.+.+++++.++++..
T Consensus 195 ~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 264 (393)
T 4dwd_A 195 GFDANNGYSVGGAIRVGRALEDLGYSWFE-------EPV---QHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG 264 (393)
T ss_dssp EEECTTCCCHHHHHHHHHHHHHTTCSEEE-------CCS---CTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC---CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 99999999999999999999999999884 211 13578999999999999999999999999999999976
Q ss_pred CccEEEEehhh
Q 023070 160 GCEGVLSAESL 170 (287)
Q Consensus 160 gad~VmiGR~~ 170 (287)
+|.|++--+-
T Consensus 265 -~d~v~~k~~~ 274 (393)
T 4dwd_A 265 -VRMVQPDIVK 274 (393)
T ss_dssp -CCEECCCTTT
T ss_pred -CCEEEeCccc
Confidence 9999884433
No 129
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.83 E-value=3.1e-08 Score=93.03 Aligned_cols=143 Identities=13% Similarity=0.065 Sum_probs=113.8
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCccccc-ccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAF-LMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~-l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
.+|+++++.|+ .++.||..+.++.|+|.. +..|.. ...+++...+++++||+.+ ++++.++.+-+|+.++++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHH
Confidence 58999998777 567799999999998753 111221 1224667788899999887 689999999999999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
++++.+++.|+++|. +.- .+.|++..+++++.+++||++.+.+.+++++.++++...+|.|++--+-.+.
T Consensus 226 ~~~~~l~~~~i~~iE-------eP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GG 295 (404)
T 4e5t_A 226 RLARRLEAYDPLWFE-------EPI---PPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGG 295 (404)
T ss_dssp HHHHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSC
T ss_pred HHHHHHhhcCCcEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCC
Confidence 999999999999884 111 1357899999999999999999999999999999998889999875444433
Q ss_pred c
Q 023070 174 P 174 (287)
Q Consensus 174 P 174 (287)
.
T Consensus 296 i 296 (404)
T 4e5t_A 296 L 296 (404)
T ss_dssp H
T ss_pred H
Confidence 3
No 130
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.83 E-value=7.6e-08 Score=88.74 Aligned_cols=139 Identities=13% Similarity=0.143 Sum_probs=113.6
Q ss_pred CEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCC
Q 023070 10 PLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g 86 (287)
|+...+...+|+.+.+.++ .++.||..+.+++|++ ++.-.+++++|++.+ ++++.++.+-+
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~ 193 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQA 193 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCC
Confidence 4445677789999988776 5678999999998764 345567888888876 68999999999
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.+++.++++.+++.|+.+|. +.. .+.|++..+++++.+++||.+.+.+.+++++.++++...+|.|++
T Consensus 194 ~~~~~a~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 263 (354)
T 3jva_A 194 WTPKDAVKAIQALADYQIELVE-------QPV---KRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINI 263 (354)
T ss_dssp SCHHHHHHHHHHTTTSCEEEEE-------CCS---CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE-------CCC---ChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 9999999999999999988884 211 135789999999999999999999999999999999888999999
Q ss_pred ehhhhhCc
Q 023070 167 AESLLENP 174 (287)
Q Consensus 167 GR~~l~nP 174 (287)
--+-.+..
T Consensus 264 k~~~~GGi 271 (354)
T 3jva_A 264 KLMKCGGI 271 (354)
T ss_dssp CHHHHTSH
T ss_pred CchhcCCH
Confidence 65554443
No 131
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.83 E-value=2.8e-08 Score=93.93 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=105.1
Q ss_pred CCH-HHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 18 NDP-EILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 18 ~~~-~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
.++ +.+.++|+ .++.||+.|.|+.|+ +++...+++++|++++ ++++.++.+-+|+.++++
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai 246 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADAR 246 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 578 88888877 456799999999775 4677788999999876 689999999899999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-CcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++++.+++.|+++|- +.. .+.+++..+++++.++ +||++.+.+.+++++.++++...+|.|++
T Consensus 247 ~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 310 (428)
T 3bjs_A 247 RVLPVLAEIQAGWLE-------EPF---ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQP 310 (428)
T ss_dssp HHHHHHHHTTCSCEE-------CCS---CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHhcCCCEEE-------CCC---CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 999999999999873 211 1368999999999998 99999999999999999998878999887
No 132
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.83 E-value=1.6e-07 Score=82.84 Aligned_cols=160 Identities=15% Similarity=0.178 Sum_probs=100.1
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHH-cCCCCEEEEeccCChhh-----hh-----cCcccccccCChHHHHHHHHHHhhc
Q 023070 8 DRPLFVQFCANDP--EILLNAARRV-EPYCDYVDINLGCPQRI-----AR-----RGNYGAFLMDNLPLVKSLVEKLALN 74 (287)
Q Consensus 8 ~~p~~~Qi~g~~~--~~~~~aA~~~-~~g~d~IdiN~gcP~~~-----~~-----~~~~G~~l~~~~~~~~~iv~~v~~~ 74 (287)
...+++-|...+| +.+.+.++.+ +.|+|.|+|+.-++-+. +. .-..| -+++...++++++++.
T Consensus 17 ~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g----~~~~~~~~~i~~ir~~ 92 (262)
T 1rd5_A 17 KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASG----TTMDAVLEMLREVTPE 92 (262)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTT----CCHHHHHHHHHHHGGG
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhc
Confidence 4567888877777 8888888755 56899999986443111 10 00111 2678889999999988
Q ss_pred cCCcEEEEecCC--------------C--------ChhhHHHHHHHHHHcCCCEEEE-eccCCC-----------C----
Q 023070 75 LNVPVSCKIRVF--------------P--------NLQDTIKYAKMLEDAGCSLLAV-HGRTRD-----------E---- 116 (287)
Q Consensus 75 ~~~pv~vKiR~g--------------~--------~~~~~~~~a~~l~~~G~~~I~v-h~rt~~-----------~---- 116 (287)
+++||.+-.+.. . ..++..++.+.+.+.|.+.+.+ ...+.. .
T Consensus 93 ~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~ 172 (262)
T 1rd5_A 93 LSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYL 172 (262)
T ss_dssp CSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEE
T ss_pred CCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEE
Confidence 899988743210 0 0112223333333333332211 111100 0
Q ss_pred --cCCCCc------cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 117 --KDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 117 --~~~~~~------~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
..+.+| +...+.++++++.+++||++.|||+|++++.++++ .|||+|.+|++++.
T Consensus 173 ~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~-~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 173 VSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQ-WGADGVIIGSAMVR 235 (262)
T ss_dssp ECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred ecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHH-cCCCEEEEChHHHh
Confidence 001011 11346788999888999999999999999999988 69999999999864
No 133
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.81 E-value=8.8e-09 Score=89.71 Aligned_cols=87 Identities=21% Similarity=0.250 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
+..++++.+++.|+++|+++..+.... +...+ +.++++++.+++||+++|||.+++++.++++ .|||+|++|+++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~---~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~-~Gad~V~lg~~~ 106 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG---RGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALA-TGCARVNVGTAA 106 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT---SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc---CCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHH-cCCCEEEECchH
Confidence 788999999999999999986543321 11345 8899999999999999999999999999998 599999999999
Q ss_pred hhCccchhchhh
Q 023070 171 LENPALFAGFRT 182 (287)
Q Consensus 171 l~nP~lf~~~~~ 182 (287)
+.+|+++.++..
T Consensus 107 l~~p~~~~~~~~ 118 (244)
T 2y88_A 107 LENPQWCARVIG 118 (244)
T ss_dssp HHCHHHHHHHHH
T ss_pred hhChHHHHHHHH
Confidence 999998877643
No 134
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.81 E-value=1e-08 Score=89.09 Aligned_cols=89 Identities=27% Similarity=0.387 Sum_probs=75.4
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
+++.++++.+++.|+++|+++....... ....+++.++++++.+++||+++|+|.+++++.++++ .|||+|++|+.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~-~Gad~V~i~~~ 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPE---GRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFR-AGADKVSVNTA 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTT---THHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcccc---CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH-cCCCEEEEChH
Confidence 4678999999999999999997654321 1235678899999999999999999999999998888 59999999999
Q ss_pred hhhCccchhchhh
Q 023070 170 LLENPALFAGFRT 182 (287)
Q Consensus 170 ~l~nP~lf~~~~~ 182 (287)
++.+|+++.++..
T Consensus 109 ~~~~~~~~~~~~~ 121 (253)
T 1h5y_A 109 AVRNPQLVALLAR 121 (253)
T ss_dssp HHHCTHHHHHHHH
T ss_pred HhhCcHHHHHHHH
Confidence 9999998887643
No 135
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.80 E-value=3.2e-07 Score=78.19 Aligned_cols=89 Identities=17% Similarity=0.239 Sum_probs=75.5
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
....++++.+...|+..+.+++.+..+... ..+++.++++++..++|||+.||+.+++++.++++ .|+|+|++|++
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~~~~g~~~---g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~-~G~~~~~vg~a 205 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFL-AGADAALAASV 205 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTCCS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHH-HTCSEEEESHH
T ss_pred cCHHHHHHHHhhcCCCeEEEEecCCCCccc---cccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHH-cCcHHHhhhHH
Confidence 356788899999999989998864443322 23488999999989999999999999999999998 69999999999
Q ss_pred hhhCccchhchhh
Q 023070 170 LLENPALFAGFRT 182 (287)
Q Consensus 170 ~l~nP~lf~~~~~ 182 (287)
++.+|+-+.++..
T Consensus 206 ~~~~~~~~~~~~~ 218 (237)
T 3cwo_X 206 FHFREIDVRELKE 218 (237)
T ss_dssp HHTTSSCHHHHHH
T ss_pred HHcCCCCHHHHHH
Confidence 9999999987754
No 136
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.79 E-value=3.5e-08 Score=93.18 Aligned_cols=162 Identities=10% Similarity=0.063 Sum_probs=122.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhh-----cC-ccccccc--CChHHHHHHHHHHhhcc--
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR-----RG-NYGAFLM--DNLPLVKSLVEKLALNL-- 75 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~-----~~-~~G~~l~--~~~~~~~~iv~~v~~~~-- 75 (287)
+..|+-..+.+.+|+++++.++ .++.||..|.+.+|++..... ++ .-|..+. +.++...+++++||+++
T Consensus 142 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~ 221 (422)
T 3tji_A 142 DAIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGW 221 (422)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCS
T ss_pred CeEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCC
Confidence 3456656677889999998887 567899999999987421000 00 0111111 12566788899999886
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~ 155 (287)
++++.++.+-+|+.++++++++.+++.|+.+|- +.- .+.+++.++++++.+++||++.+.+.+++++.++
T Consensus 222 d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~l 291 (422)
T 3tji_A 222 KLHILHDVHERLFPQQAVQLAKQLEPFQPYFIE-------DIL---PPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDL 291 (422)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CCS---CGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHH
Confidence 689999999999999999999999999999883 211 1357788899999999999999999999999999
Q ss_pred HHhcCccEEEEehhhhhCccchh
Q 023070 156 LEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 156 l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
++...+|.|++--+-.+...-..
T Consensus 292 l~~ga~d~v~~k~~~~GGit~~~ 314 (422)
T 3tji_A 292 IVNRRIDFIRCHVSQIGGITPAL 314 (422)
T ss_dssp HHTTCCSEECCCGGGGTSHHHHH
T ss_pred HhcCCCCEEecCccccCCHHHHH
Confidence 99888999998665555554333
No 137
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.78 E-value=4.8e-07 Score=80.44 Aligned_cols=141 Identities=17% Similarity=0.228 Sum_probs=98.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|++..=+.-++.++.+|. ..|+|+|=|... .+ +++.+.++++..++ .++.+.+-+.
T Consensus 113 ~lPvl~kdfiid~~qv~~A~---~~GAD~VlLi~a--------------~l-~~~~l~~l~~~a~~-lGl~~lvev~--- 170 (272)
T 3qja_A 113 SIPVLRKDFVVQPYQIHEAR---AHGADMLLLIVA--------------AL-EQSVLVSMLDRTES-LGMTALVEVH--- 170 (272)
T ss_dssp SSCEEEESCCCSHHHHHHHH---HTTCSEEEEEGG--------------GS-CHHHHHHHHHHHHH-TTCEEEEEES---
T ss_pred CCCEEECccccCHHHHHHHH---HcCCCEEEEecc--------------cC-CHHHHHHHHHHHHH-CCCcEEEEcC---
Confidence 45777665666776555443 468898888531 11 24556677776654 4666665542
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+.+ + ++.+.+.|+++|-+++|.... . ..+++.+.++.+.+ ++||++.|||+|++|+.++++ .|+|+|.
T Consensus 171 t~e---e-~~~A~~~Gad~IGv~~r~l~~---~--~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~-~Gadgvl 240 (272)
T 3qja_A 171 TEQ---E-ADRALKAGAKVIGVNARDLMT---L--DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAG-AGADAVL 240 (272)
T ss_dssp SHH---H-HHHHHHHTCSEEEEESBCTTT---C--CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHH-TTCSEEE
T ss_pred CHH---H-HHHHHHCCCCEEEECCCcccc---c--ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHH-cCCCEEE
Confidence 222 2 344557899999999875432 1 35678888888877 799999999999999999998 5999999
Q ss_pred EehhhhhCccchhch
Q 023070 166 SAESLLENPALFAGF 180 (287)
Q Consensus 166 iGR~~l~nP~lf~~~ 180 (287)
||++++..++.-..+
T Consensus 241 VGsal~~a~dp~~~~ 255 (272)
T 3qja_A 241 VGEGLVTSGDPRAAV 255 (272)
T ss_dssp ECHHHHTCSCHHHHH
T ss_pred EcHHHhCCCCHHHHH
Confidence 999999877654433
No 138
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.78 E-value=1.1e-08 Score=89.22 Aligned_cols=87 Identities=22% Similarity=0.259 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
+..++++.++++|+++|+++..+.... +...+ +.++++++.+++||+++|||.+++++.++++ .|||+|.+|+.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~---~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~-~Gad~V~lg~~~ 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG---TGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALA-TGCTRVNLGTAA 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT---SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc---CCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHH-cCCCEEEECchH
Confidence 778899999999999999986543211 11355 8899999999999999999999999999998 599999999999
Q ss_pred hhCccchhchhh
Q 023070 171 LENPALFAGFRT 182 (287)
Q Consensus 171 l~nP~lf~~~~~ 182 (287)
+.+|+++.++..
T Consensus 108 l~~p~~~~~~~~ 119 (244)
T 1vzw_A 108 LETPEWVAKVIA 119 (244)
T ss_dssp HHCHHHHHHHHH
T ss_pred hhCHHHHHHHHH
Confidence 999998877643
No 139
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.77 E-value=1.8e-07 Score=86.67 Aligned_cols=132 Identities=13% Similarity=0.166 Sum_probs=110.4
Q ss_pred CEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCC
Q 023070 10 PLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g 86 (287)
|+...+...+|+.+.+.++ .++.||..+.+..|+ +++.-.+.+++|++.+ ++++.+..+-+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG----------------SKELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 5556777789999998776 567899999999864 2455677888888876 68899999999
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.++++++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+.+.+.+++++.++++...+|.|++
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 264 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE-------EPV---SRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNL 264 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE-------CCB---CGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CChHHHHHHHHHHhhcCCCEEE-------CCC---ChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEe
Confidence 9999999999999999999884 211 135788889999999999999999999999999999888999998
Q ss_pred e
Q 023070 167 A 167 (287)
Q Consensus 167 G 167 (287)
-
T Consensus 265 k 265 (368)
T 3q45_A 265 K 265 (368)
T ss_dssp C
T ss_pred c
Confidence 4
No 140
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.77 E-value=7.6e-08 Score=85.64 Aligned_cols=131 Identities=18% Similarity=0.189 Sum_probs=90.4
Q ss_pred HHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C-CChhhHHHHHHHHHH
Q 023070 25 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQDTIKYAKMLED 101 (287)
Q Consensus 25 ~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g-~~~~~~~~~a~~l~~ 101 (287)
++...++.|+|.||+.+ ++|..+..+.+.+.+-+.+|++.++-+ .+|+=+ + .+.++....++...+
T Consensus 131 Ea~~Ai~~GAdEIDmVI----------Nig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~e 199 (288)
T 3oa3_A 131 EAKRAMQNGASELDMVM----------NYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSL 199 (288)
T ss_dssp HHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEe----------ehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence 44446788999999543 145555568888999999998887655 366533 2 345666777888899
Q ss_pred cCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHh--hCCCcEEEecCCCCHHHHHHHHHhcCcc--EEEEehhhh
Q 023070 102 AGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKN--ALRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLL 171 (287)
Q Consensus 102 ~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~--~~~ipVi~nGgI~s~~da~~~l~~~gad--~VmiGR~~l 171 (287)
+|+|+|--+ |-+. ......|...++++.+ ..+++|.++|||+|.+++.++++ .||+ |...|+.++
T Consensus 200 aGADfVKTSTGf~~----~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~-aGA~RiGtS~g~~I~ 269 (288)
T 3oa3_A 200 AGADYVKTSTGFNG----PGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVR-AGAERLGASAGVKIV 269 (288)
T ss_dssp TTCSEEECCCSSSS----CCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHH-TTCSEEEESCHHHHH
T ss_pred cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH-cCCceeehhhHHHHH
Confidence 999999544 3221 1111235566666654 24799999999999999999998 5999 444444444
No 141
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.77 E-value=1.2e-07 Score=89.19 Aligned_cols=145 Identities=16% Similarity=0.121 Sum_probs=114.5
Q ss_pred CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccc-cCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhH
Q 023070 17 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFL-MDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDT 92 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l-~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~ 92 (287)
..+|+++++.|+ .++.||..|.++.|+|... ..|... ..+++...+++++||+.+ ++++.++.+-+|+.+++
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A 217 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSA 217 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHH
Confidence 358999998777 5677999999999987531 112111 123667788899999887 58999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 93 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 93 ~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+++++.+++.|+.+|. +.- .+.|++.++++++.+++||.+.+.+.+++++.++++...+|.|++--+-.+
T Consensus 218 ~~~~~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~G 287 (412)
T 4e4u_A 218 IRLAKRLEKYDPLWFE-------EPV---PPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVG 287 (412)
T ss_dssp HHHHHHHGGGCCSEEE-------CCS---CSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTT
T ss_pred HHHHHHhhhcCCcEEE-------CCC---ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 9999999999999884 111 135789999999999999999999999999999999878999988554444
Q ss_pred Ccc
Q 023070 173 NPA 175 (287)
Q Consensus 173 nP~ 175 (287)
...
T Consensus 288 Git 290 (412)
T 4e4u_A 288 GLL 290 (412)
T ss_dssp SHH
T ss_pred CHH
Confidence 443
No 142
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.76 E-value=9.2e-08 Score=81.58 Aligned_cols=149 Identities=24% Similarity=0.275 Sum_probs=94.7
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhh--hh--cCccccccc------CChHHHHHHHHH-----
Q 023070 7 EDRPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRI--AR--RGNYGAFLM------DNLPLVKSLVEK----- 70 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~--~~--~~~~G~~l~------~~~~~~~~iv~~----- 70 (287)
.+.|+++.|.+.+++++.+.++.+ +.|++.|++...+|... .+ ...++.-++ .+++.+...++.
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V 84 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLI 84 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEE
Confidence 478999999999999999988865 55899999997776521 11 112222111 123332222211
Q ss_pred -----------HhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC--
Q 023070 71 -----------LALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-- 137 (287)
Q Consensus 71 -----------v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-- 137 (287)
.++..+.++.+.+ .+..+ +....+.|+|+|.++.. ....++.++++++..+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~g~------~t~~e-~~~a~~~G~d~v~v~~t---------~~~g~~~~~~l~~~~~~~ 148 (212)
T 2v82_A 85 VTPNIHSEVIRRAVGYGMTVCPGC------ATATE-AFTALEAGAQALKIFPS---------SAFGPQYIKALKAVLPSD 148 (212)
T ss_dssp ECSSCCHHHHHHHHHTTCEEECEE------CSHHH-HHHHHHTTCSEEEETTH---------HHHCHHHHHHHHTTSCTT
T ss_pred EeCCCCHHHHHHHHHcCCCEEeec------CCHHH-HHHHHHCCCCEEEEecC---------CCCCHHHHHHHHHhccCC
Confidence 0001122221110 11122 33446678888876421 0235788899988775
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 138 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 138 ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
+||++.|||. ++++.++++ .|+|+|.+|++++..
T Consensus 149 ipvia~GGI~-~~~i~~~~~-~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 149 IAVFAVGGVT-PENLAQWID-AGCAGAGLGSDLYRA 182 (212)
T ss_dssp CEEEEESSCC-TTTHHHHHH-HTCSEEEECTTTCCT
T ss_pred CeEEEeCCCC-HHHHHHHHH-cCCCEEEEChHHhCC
Confidence 9999999997 899999998 699999999998865
No 143
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.76 E-value=2e-08 Score=88.60 Aligned_cols=88 Identities=17% Similarity=0.259 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.++.++++.+++.|++.|.++......... ..+++.++++++.+++||+++|||.+++++.++++ .|||+|++|+.
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~---g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~-~Gad~v~lg~~ 105 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFL-AGADKALAASV 105 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCSS---CCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHH-HTCSEEECCCC
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCCC---cccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH-cCCcHhhhhHH
Confidence 468899999999999999998766543222 36789999999999999999999999999999998 69999999999
Q ss_pred hh-h--Cccchhchh
Q 023070 170 LL-E--NPALFAGFR 181 (287)
Q Consensus 170 ~l-~--nP~lf~~~~ 181 (287)
++ . +|+.+.++.
T Consensus 106 ~~~~~~~~~~~~~~~ 120 (266)
T 2w6r_A 106 FHFREIDMRELKEYL 120 (266)
T ss_dssp C------CHHHHHHC
T ss_pred HHhCCCCHHHHHHHH
Confidence 99 5 899888764
No 144
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.75 E-value=8.7e-08 Score=90.89 Aligned_cols=125 Identities=11% Similarity=0.142 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 17 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
+.+++++.++|+ ..+.||+.|.|+.|+ +++...+++++|++.+ ++++.+..+-+|+.++++
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 259 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAI 259 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHH
Confidence 358999988887 557799999999763 3677788899999876 689999998899999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++++.+++.|+++|- +. . .+.|++..+++++.+ ++||++.+.+.+++++.++++...+|.|++-
T Consensus 260 ~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 260 DWMRQLAEFDIAWIE-------EP--T-SPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp HHHHTTGGGCCSCEE-------CC--S-CTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHHHhcCCCeee-------CC--C-CHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999773 21 1 135889999999887 6999999999999999999998889999873
No 145
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.74 E-value=1.9e-07 Score=86.67 Aligned_cols=133 Identities=11% Similarity=0.081 Sum_probs=108.4
Q ss_pred CCEEEEecC---CCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEE
Q 023070 9 RPLFVQFCA---NDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSC 81 (287)
Q Consensus 9 ~p~~~Qi~g---~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~v 81 (287)
.|+-..+.| .+++.+.+.++ .++. ||..|.+++|+| +++.-.+.++++++.+ ++++.+
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~v 202 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAI 202 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEe
Confidence 455554333 38888887766 6778 999999998865 3455678889999877 689999
Q ss_pred EecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 82 KIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 82 KiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
+.+-+|+.+++.++++.+++.|+.+|- +.. .+.|++.++++++.+++||.+.+.+.+++++.++++...+
T Consensus 203 Dan~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 272 (372)
T 3tj4_A 203 DGNGKWDLPTCQRFCAAAKDLDIYWFE-------EPL---WYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAV 272 (372)
T ss_dssp ECTTCCCHHHHHHHHHHTTTSCEEEEE-------SCS---CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHHhhcCCCEEE-------CCC---CchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCC
Confidence 999999999999999999999988773 211 1357899999999999999999999999999999998789
Q ss_pred cEEEE
Q 023070 162 EGVLS 166 (287)
Q Consensus 162 d~Vmi 166 (287)
|.|++
T Consensus 273 d~v~~ 277 (372)
T 3tj4_A 273 AYVQP 277 (372)
T ss_dssp SEECC
T ss_pred CEEEe
Confidence 98887
No 146
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.73 E-value=2.2e-07 Score=86.34 Aligned_cols=141 Identities=12% Similarity=0.117 Sum_probs=112.9
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
..|+-..+...+++.+.+.++ .++.||..+.+..|+. +++.-.+.+++|++.+ ++++.++.+
T Consensus 135 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 199 (377)
T 3my9_A 135 RIPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFN 199 (377)
T ss_dssp EEEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 345656676678888877665 5667999999998742 3455567788888876 689999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
-+|+.++++++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+.+.+.++.++.++++...+|.|
T Consensus 200 ~~~~~~~A~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v 269 (377)
T 3my9_A 200 QALTPFGAMKILRDVDAFRPTFIE-------QPV---PRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAI 269 (377)
T ss_dssp TCCCTTTHHHHHHHHHTTCCSCEE-------CCS---CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCcCHHHHHHHHHHHhhcCCCEEE-------CCC---CccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999998883 211 1357999999999999999999999999999999998889999
Q ss_pred EEehhhhhC
Q 023070 165 LSAESLLEN 173 (287)
Q Consensus 165 miGR~~l~n 173 (287)
++--+-.+.
T Consensus 270 ~~k~~~~GG 278 (377)
T 3my9_A 270 SVKIMKCGG 278 (377)
T ss_dssp ECCHHHHTS
T ss_pred EecccccCC
Confidence 985444333
No 147
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.73 E-value=2.3e-07 Score=86.71 Aligned_cols=135 Identities=10% Similarity=0.210 Sum_probs=111.4
Q ss_pred CCCEEEEecC---CCHHHHHHHHH-HHcC---CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCc
Q 023070 8 DRPLFVQFCA---NDPEILLNAAR-RVEP---YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVP 78 (287)
Q Consensus 8 ~~p~~~Qi~g---~~~~~~~~aA~-~~~~---g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~p 78 (287)
..|+-..+++ .+|+.+.+.++ .++. ||..|.+..|.+ +++.-.+.+++|++.+ +++
T Consensus 157 ~v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~ 221 (390)
T 3ugv_A 157 SVKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTA 221 (390)
T ss_dssp EEEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSE
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCE
Confidence 3455566666 78999988776 6788 999999998753 3556677888888876 689
Q ss_pred EEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHh
Q 023070 79 VSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 79 v~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~ 158 (287)
+.+..+-+|+.++++++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+.+.+.++.++.++++.
T Consensus 222 l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 291 (390)
T 3ugv_A 222 LMVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------EPV---VYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQA 291 (390)
T ss_dssp EEEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC---CcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHc
Confidence 999999999999999999999999998883 211 1357899999999999999999999999999999998
Q ss_pred cCccEEEEe
Q 023070 159 TGCEGVLSA 167 (287)
Q Consensus 159 ~gad~VmiG 167 (287)
..+|.|++-
T Consensus 292 ~a~d~v~ik 300 (390)
T 3ugv_A 292 GACDLVMPD 300 (390)
T ss_dssp TCCSEECCB
T ss_pred CCCCEEEeC
Confidence 789999874
No 148
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.72 E-value=2.2e-07 Score=86.86 Aligned_cols=145 Identities=12% Similarity=0.180 Sum_probs=118.2
Q ss_pred CCCEEEEec----CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEE
Q 023070 8 DRPLFVQFC----ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVS 80 (287)
Q Consensus 8 ~~p~~~Qi~----g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~ 80 (287)
..|+-..++ ..+|+.+++.|+ .++.||..|.+++|+ +++.-.+.+++|++.+ ++++.
T Consensus 127 ~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~ 190 (391)
T 3gd6_A 127 KIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIK 190 (391)
T ss_dssp EEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEE
T ss_pred eEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEE
Confidence 456666777 788999988887 567899999999875 2456677888888876 58899
Q ss_pred -EEecCCCChhhHHHHHHHHHHcCC--CEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q 023070 81 -CKIRVFPNLQDTIKYAKMLEDAGC--SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE 157 (287)
Q Consensus 81 -vKiR~g~~~~~~~~~a~~l~~~G~--~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~ 157 (287)
+..+-+|+.+++.++++.+++.|+ .+|. +.- .+.|++.++++++.+++|| .+.+.+++++.++++
T Consensus 191 ~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------qP~---~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~ 258 (391)
T 3gd6_A 191 SYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------SPA---PRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIK 258 (391)
T ss_dssp EEECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------CCS---CTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHH
T ss_pred EecCCCCcCHHHHHHHHHHHHhcCCCcceec-------CCC---ChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHH
Confidence 999999999999999999999999 7774 211 1357999999999999999 888999999999999
Q ss_pred hcCccEEEEehhhhhCccchhch
Q 023070 158 ETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 158 ~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
...+|.|++--+-.+...-+.++
T Consensus 259 ~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 259 KDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTCCSEEEECHHHHTSHHHHHHH
T ss_pred cCCCCEEEECchhcCCHHHHHHH
Confidence 88899999987777776644433
No 149
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.72 E-value=3.8e-07 Score=84.97 Aligned_cols=134 Identities=12% Similarity=0.125 Sum_probs=110.8
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
..|+-..++..+|+.+.+.++ .++. ||..+.+..|++ +++.-.+.++++++.+ ++++.+..
T Consensus 156 ~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDa 220 (383)
T 3toy_A 156 PIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDF 220 (383)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 346656665679999988776 5678 999999998753 3556677888888876 68999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+-+|+.++++++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+.+.+.++.++.++++...+|.
T Consensus 221 N~~~~~~~A~~~~~~l~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 290 (383)
T 3toy_A 221 NQSLDPAEATRRIARLADYDLTWIE-------EPV---PQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDF 290 (383)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSE
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE-------CCC---CcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 9999999999999999999998883 211 135789999999999999999999999999999999878999
Q ss_pred EEE
Q 023070 164 VLS 166 (287)
Q Consensus 164 Vmi 166 (287)
|++
T Consensus 291 v~i 293 (383)
T 3toy_A 291 IMP 293 (383)
T ss_dssp ECC
T ss_pred EEe
Confidence 876
No 150
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.72 E-value=1.2e-07 Score=82.69 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=96.1
Q ss_pred HHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE------ecCCCC--------h
Q 023070 25 NAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK------IRVFPN--------L 89 (287)
Q Consensus 25 ~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK------iR~g~~--------~ 89 (287)
++++ +.+.|+|.|+|-. +.--+.+.+.++++++++ .++|+.+= +..|.+ .
T Consensus 24 ~~~~~l~~~GaD~ielG~--------------S~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdLp~ 88 (240)
T 1viz_A 24 EQLEILCESGTDAVIIGG--------------SDGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSVLN 88 (240)
T ss_dssp HHHHHHHTSCCSEEEECC------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEETT
T ss_pred HHHHHHHHcCCCEEEECC--------------CCCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEcccCc
Confidence 3444 4567999999975 122467789999999998 78998852 112211 1
Q ss_pred hhHHHH-----HHHHHHcC-----CCEEE----E-eccCC-------------C--------------Cc---CCCCccc
Q 023070 90 QDTIKY-----AKMLEDAG-----CSLLA----V-HGRTR-------------D--------------EK---DGKKFRA 124 (287)
Q Consensus 90 ~~~~~~-----a~~l~~~G-----~~~I~----v-h~rt~-------------~--------------~~---~~~~~~~ 124 (287)
++..++ .+.+.+.| .+.|. + ++.+. . .. .......
T Consensus 89 ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s~G~~~ 168 (240)
T 1viz_A 89 SKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSGVLG 168 (240)
T ss_dssp BSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTTSCC
T ss_pred ccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeCCCccC
Confidence 212233 45567777 76664 3 11110 0 00 0001145
Q ss_pred cHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc-chhchhh
Q 023070 125 DWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA-LFAGFRT 182 (287)
Q Consensus 125 ~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~-lf~~~~~ 182 (287)
+.+.++++++.+ ++||++.|||+|++++.++++ |||+|.+|+++..+|. ++++++.
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~--gAd~VIVGSa~v~~~~~~~~~v~~ 226 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE--HADVIVVGNAVYEDFDRALKTVAA 226 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT--TCSEEEECTHHHHCHHHHHTHHHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh--CCCEEEEChHHHhCHHHHHHHHHH
Confidence 789999999999 999999999999999999876 8999999999999999 8887654
No 151
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.71 E-value=9.8e-08 Score=89.24 Aligned_cols=125 Identities=12% Similarity=0.051 Sum_probs=105.1
Q ss_pred CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 17 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
|.+|+++++.++ .++.||..|.|++|+ +++.-.+.+++||+.+ ++++.+..+-+|+.+++.
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~ 216 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDLPRAR 216 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHH
Confidence 445888888777 456799999999873 4566778889999886 689999999999999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCcccc-HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD-WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~-~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
++++.+++.|+.+|- +.- .+.| ++.++++++.+++||.+.+.+.+++++.++++...+|.|++-
T Consensus 217 ~~~~~L~~~~i~~iE-------eP~---~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 217 QMAQRLGPAQLDWLE-------EPL---RADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp HHHHHHGGGCCSEEE-------CCS---CTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHhCCCEEE-------CCC---CccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999884 211 1356 899999999999999999999999999999988789998873
No 152
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.70 E-value=5.3e-07 Score=84.06 Aligned_cols=144 Identities=12% Similarity=0.170 Sum_probs=117.6
Q ss_pred CCCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 023070 6 PEDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 82 (287)
Q Consensus 6 ~~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vK 82 (287)
.+..|+-..+...+|+++++.++ .++.||..|.+++|||.. ..+++.-.+.++++++.+ ++++.+.
T Consensus 132 ~~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vD 200 (386)
T 3fv9_G 132 AGPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLAD 200 (386)
T ss_dssp SSCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CCceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 34568888888999999998887 567899999999998732 124667778899999987 5899999
Q ss_pred ecCCCChhhHHHHHHHH-HHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 83 IRVFPNLQDTIKYAKML-EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l-~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
.+-+|+..++.++++.+ ++.++ +| ++ |.+ +++..+++++.+++||.+...+.++.++.++++...+
T Consensus 201 aN~~~~~~~A~~~~~~l~~~~~i-~i-------Ee----P~~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~ 267 (386)
T 3fv9_G 201 ANNGLTVEHALRMLSLLPPGLDI-VL-------EA----PCA-SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLC 267 (386)
T ss_dssp CTTCCCHHHHHHHHHHSCSSCCC-EE-------EC----CCS-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHhhccCCc-EE-------ec----CCC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC
Confidence 99999999999999999 77776 65 22 123 8899999999999999999999999999999998889
Q ss_pred cEEEEehhhhhC
Q 023070 162 EGVLSAESLLEN 173 (287)
Q Consensus 162 d~VmiGR~~l~n 173 (287)
|.|++--+-.+.
T Consensus 268 d~v~~k~~~~GG 279 (386)
T 3fv9_G 268 DGVGLKVSKQGG 279 (386)
T ss_dssp SEEEEEHHHHTS
T ss_pred CEEEECccccCC
Confidence 999985444433
No 153
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.70 E-value=2.7e-07 Score=78.45 Aligned_cols=143 Identities=15% Similarity=0.214 Sum_probs=95.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+.+.+.-.++... .+-..++.|+|+|-++... ..+.+.++++.+++. +.++.+-+..
T Consensus 53 ~~~i~~~~~~~~~~~~-~~~~~~~~Gad~v~v~~~~----------------~~~~~~~~~~~~~~~-g~~~~v~~~~-- 112 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHF-ESQLLFDAGADYVTVLGVT----------------DVLTIQSCIRAAKEA-GKQVVVDMIC-- 112 (211)
T ss_dssp TSEEEEEEEECSCHHH-HHHHHHHTTCSEEEEETTS----------------CHHHHHHHHHHHHHH-TCEEEEECTT--
T ss_pred CCEEEEEEEeccchHH-HHHHHHhcCCCEEEEeCCC----------------ChhHHHHHHHHHHHc-CCeEEEEecC--
Confidence 4677666655554432 1222456799999997421 123445566665543 5565554221
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
..+..+.++.+.+.|+++|.++.....+... +..++.++++++.. ++||++.|||+ ++++.++++ .|||+|.+
T Consensus 113 -~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~---~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~-~Gad~vvv 186 (211)
T 3f4w_A 113 -VDDLPARVRLLEEAGADMLAVHTGTDQQAAG---RKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYAL-LGPDVVIV 186 (211)
T ss_dssp -CSSHHHHHHHHHHHTCCEEEEECCHHHHHTT---CCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHT-TCCSEEEE
T ss_pred -CCCHHHHHHHHHHcCCCEEEEcCCCcccccC---CCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHH-cCCCEEEE
Confidence 2345577888899999999887432221111 24678899999886 89999999996 999999998 59999999
Q ss_pred ehhhhhCccc
Q 023070 167 AESLLENPAL 176 (287)
Q Consensus 167 GR~~l~nP~l 176 (287)
||+++..++.
T Consensus 187 Gsai~~~~d~ 196 (211)
T 3f4w_A 187 GSAITHAADP 196 (211)
T ss_dssp CHHHHTCSSH
T ss_pred CHHHcCCCCH
Confidence 9999876653
No 154
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.70 E-value=2e-07 Score=87.98 Aligned_cols=155 Identities=10% Similarity=0.118 Sum_probs=118.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCccccc------------------c--cCChHHHH
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAF------------------L--MDNLPLVK 65 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~------------------l--~~~~~~~~ 65 (287)
+..|+-.-+.+.+|+++++.++ .++.||..+.+..|-|... ..||.. . ..+.+...
T Consensus 137 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~---~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 213 (424)
T 3v3w_A 137 ERILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIA---KTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIP 213 (424)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS---CCTTCC-----CCSCCBSSCCEEEECHHHHHHHHH
T ss_pred CceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCcccc---ccccccccccccccccccccccccccchhHHHHHH
Confidence 3456655677889999998887 5678999999998864310 001110 0 01245678
Q ss_pred HHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe
Q 023070 66 SLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 66 ~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n 143 (287)
+++++||+++ ++++.+..+-+|+.++++++++.+++.|+.+|. +.- .+.+++.++++++.+++||++.
T Consensus 214 e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~d 283 (424)
T 3v3w_A 214 DVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DAV---PAENQESFKLIRQHTTTPLAVG 283 (424)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CCS---CCSSTTHHHHHHHHCCSCEEEC
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---ChHhHHHHHHHHhhCCCCEEEc
Confidence 8899999887 689999999999999999999999999999884 111 1357788999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 144 GNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 144 GgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
+.+.+++++.++++...+|.|++--+-.+..
T Consensus 284 E~~~~~~~~~~~i~~ga~d~v~~k~~~~GGi 314 (424)
T 3v3w_A 284 EVFNSIHDCRELIQNQWIDYIRTTIVHAGGI 314 (424)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECCCTTTTTHH
T ss_pred cCcCCHHHHHHHHHcCCCCeEeecchhcCCH
Confidence 9999999999999987899998854444433
No 155
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.69 E-value=3.2e-07 Score=84.94 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=110.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChH-HHHHHHHHHhhcc--CCcEEE
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLP-LVKSLVEKLALNL--NVPVSC 81 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~-~~~~iv~~v~~~~--~~pv~v 81 (287)
+..|+...++..+|+.+.+.++ .++. ||..+.+..|.. +. .-.+.+++|++.+ ++++.+
T Consensus 127 ~~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~----------------~~~~d~~~v~avR~a~g~~~~l~v 190 (367)
T 3dg3_A 127 DRMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRR----------------PVQLDTAVVRALRERFGDAIELYV 190 (367)
T ss_dssp SEEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCS----------------STHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCC----------------hhhhHHHHHHHHHHHhCCCCEEEE
Confidence 3446667777789999988776 5677 999999997641 22 4466788888876 689999
Q ss_pred EecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 82 KIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 82 KiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
..+-+|+.+++.++++.+++.|+.+|. +.- .+.|++..+++++.+++||.+.+.+.+++++.++++...+
T Consensus 191 Dan~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 260 (367)
T 3dg3_A 191 DGNRGWSAAESLRAMREMADLDLLFAE-------ELC---PADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSA 260 (367)
T ss_dssp ECTTCSCHHHHHHHHHHTTTSCCSCEE-------SCS---CTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSC
T ss_pred ECCCCCCHHHHHHHHHHHHHhCCCEEE-------CCC---CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 999999999999999999999998884 211 1357888999999999999999999999999999998789
Q ss_pred cEEEE
Q 023070 162 EGVLS 166 (287)
Q Consensus 162 d~Vmi 166 (287)
|.|++
T Consensus 261 d~v~~ 265 (367)
T 3dg3_A 261 TAISI 265 (367)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 99988
No 156
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.69 E-value=1.5e-07 Score=88.81 Aligned_cols=156 Identities=13% Similarity=0.085 Sum_probs=117.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCccccc-----cc---------------CChHHHH
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAF-----LM---------------DNLPLVK 65 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~-----l~---------------~~~~~~~ 65 (287)
+..|+-.-+.+.+|+++++.++ .++.||..|.+..|.|.. ...||.. .. +..+...
T Consensus 138 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~---~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 214 (425)
T 3vcn_A 138 TGVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGL---ASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVP 214 (425)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---SCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccc---cccccccccccccCcccccccccccccchhHHHHHH
Confidence 4456656677889999998887 567899999999887431 0011100 00 0123456
Q ss_pred HHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe
Q 023070 66 SLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 66 ~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n 143 (287)
+++++||+.+ ++++.+..+-+|+.++++++++.+++.|+.+|. +.- .+.+++.++++++.+++||++.
T Consensus 215 e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~d 284 (425)
T 3vcn_A 215 KLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE-------DSV---PAENQAGFRLIRQHTTTPLAVG 284 (425)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CCS---CCSSTTHHHHHHHHCCSCEEEC
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---ChhhHHHHHHHHhcCCCCEEeC
Confidence 7888888876 689999999999999999999999999999884 111 1347788999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 144 GNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 144 GgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
+.+.+++++.++++...+|.|++--+-.+...
T Consensus 285 E~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit 316 (425)
T 3vcn_A 285 EIFAHVWDAKQLIEEQLIDYLRATVLHAGGIT 316 (425)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CCcCCHHHHHHHHHcCCCCeEecChhhcCCHH
Confidence 99999999999999878999998654444333
No 157
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.67 E-value=2.4e-07 Score=83.31 Aligned_cols=52 Identities=27% Similarity=0.530 Sum_probs=45.5
Q ss_pred cccHHHHHHHHhhCCCcEE--EecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 123 RADWNAIKAVKNALRIPVL--ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 123 ~~~~~~i~~i~~~~~ipVi--~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
..+++.++++++.+++||+ +.|||.+++|+.++++ .|||+|++|++++..++
T Consensus 193 ~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~-~GAdgVlVGsai~~a~d 246 (297)
T 4adt_A 193 RAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQ-LGMDGVFVGSGIFESEN 246 (297)
T ss_dssp TCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHH-TTCSCEEESHHHHTSSC
T ss_pred CCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHH-cCCCEEEEhHHHHcCCC
Confidence 3578889999988888887 9999999999999998 59999999999997543
No 158
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.66 E-value=7.3e-07 Score=83.09 Aligned_cols=141 Identities=12% Similarity=0.132 Sum_probs=112.8
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIR 84 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR 84 (287)
+..|+-..+...+++.+.+.++ .++.||..+.+..|+. +++.-.+.++++++.+ ++++.+..+
T Consensus 136 ~~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan 200 (385)
T 3i6e_A 136 DTIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYN 200 (385)
T ss_dssp SEEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 3456667777778888777665 5677999999998742 3455567788888776 688999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
.+|+.+++.++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+...+.++.++.++++...+|.|
T Consensus 201 ~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v 270 (385)
T 3i6e_A 201 QGLEIDEAVPRVLDVAQFQPDFIE-------QPV---RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGV 270 (385)
T ss_dssp TCCCGGGHHHHHHHHHTTCCSCEE-------CCS---CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999998883 211 1357999999999999999999999999999999998889999
Q ss_pred EEehhhhh
Q 023070 165 LSAESLLE 172 (287)
Q Consensus 165 miGR~~l~ 172 (287)
++--+-.+
T Consensus 271 ~~k~~~~G 278 (385)
T 3i6e_A 271 SIKIMKSG 278 (385)
T ss_dssp EECHHHHT
T ss_pred EecccccC
Confidence 98544433
No 159
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.66 E-value=2.5e-07 Score=85.55 Aligned_cols=129 Identities=11% Similarity=0.059 Sum_probs=103.7
Q ss_pred CCEEEEecC-CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 9 RPLFVQFCA-NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 9 ~p~~~Qi~g-~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
.|+...++. .+++.+.+.|+ .++.||+.|.++.+ |+...++++++++.+ ++++.+..+
T Consensus 130 ~~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan 191 (368)
T 1sjd_A 130 VPCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDAN 191 (368)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECT
T ss_pred ccceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEecc
Confidence 344445543 48999988887 45679999999863 233457777777766 588888888
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
-+|+.++ +++++.+++.|+++|- +. . .+.+++..+++++.+++||++.+.+.+++++.++++...+|.|
T Consensus 192 ~~~~~~~-~~~~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v 260 (368)
T 1sjd_A 192 TAYTLGD-APQLARLDPFGLLLIE-------QP--L-EEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIV 260 (368)
T ss_dssp TCCCGGG-HHHHHTTGGGCCSEEE-------CC--S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHH-HHHHHHHHhcCCCeEe-------CC--C-ChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEE
Confidence 8999999 9999999999999873 21 1 1368999999999999999999999999999999998889999
Q ss_pred EE
Q 023070 165 LS 166 (287)
Q Consensus 165 mi 166 (287)
++
T Consensus 261 ~i 262 (368)
T 1sjd_A 261 NI 262 (368)
T ss_dssp EE
T ss_pred Ee
Confidence 98
No 160
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.65 E-value=1.6e-07 Score=81.62 Aligned_cols=128 Identities=19% Similarity=0.238 Sum_probs=89.0
Q ss_pred HHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C-CChhhHHHHHHHHHH
Q 023070 25 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQDTIKYAKMLED 101 (287)
Q Consensus 25 ~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g-~~~~~~~~~a~~l~~ 101 (287)
++...++.|+|.||+.+ ++|.....+.+.+.+-+.++++.++- ..+|+=+ + .+.++....++...+
T Consensus 100 Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~ 168 (239)
T 3ngj_A 100 ETKVAVEQGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVA 168 (239)
T ss_dssp HHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHH
Confidence 44446788999999875 25555556788888888888887741 2344422 2 355667778888899
Q ss_pred cCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEE--EEehhhh
Q 023070 102 AGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGV--LSAESLL 171 (287)
Q Consensus 102 ~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~V--miGR~~l 171 (287)
+|+|+|-.. |.. ++.+..+.++.+++.+ +++|.++|||+|.+|+.++++ .||+.+ ..|+.++
T Consensus 169 aGADfVKTSTGf~-------~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~-aGA~riGtS~~~~I~ 235 (239)
T 3ngj_A 169 AGAEYVKTSTGFG-------THGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMIN-NGASRIGASAGIAIL 235 (239)
T ss_dssp HTCSEEECCCSSS-------SCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHH-TTEEEEEESCHHHHH
T ss_pred HCcCEEECCCCCC-------CCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHH-hcccceecccHHHHH
Confidence 999999654 321 1235555566555543 699999999999999999998 599944 4444444
No 161
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.65 E-value=1.7e-07 Score=89.88 Aligned_cols=134 Identities=19% Similarity=0.159 Sum_probs=93.1
Q ss_pred HHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHH
Q 023070 21 EILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKML 99 (287)
Q Consensus 21 ~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l 99 (287)
....++..+++.|+|.|.+... + .+++...+.++.+++.+ ++|+..+-= ...+.++.+
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a-----------~----g~~~~~~~~i~~l~~~~p~~pvi~G~v------~t~~~a~~~ 291 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTA-----------H----GHSAGVLRKIAEIRAHFPNRTLIAGNI------ATAEGARAL 291 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCS-----------C----TTCHHHHHHHHHHHHHCSSSCEEEEEE------CSHHHHHHH
T ss_pred hHHHHHHHHHHcCCCeEEEeee-----------c----CcchhHHHHHHHHHHHCCCCcEeCCCc------cCHHHHHHH
Confidence 3444555566779999998741 1 13455667888888877 889885511 123567788
Q ss_pred HHcCCCEEEEecc------CCCCcCCCCccccHHHHHHHHh---hCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 100 EDAGCSLLAVHGR------TRDEKDGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 100 ~~~G~~~I~vh~r------t~~~~~~~~~~~~~~~i~~i~~---~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
.++|+++|.|... ++. ... .+.+.++.++++.. ..++|||++|||+++.|+.+++. .|||+|++||++
T Consensus 292 ~~~Gad~I~vg~g~g~~~~tr~-~~~-~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~-~GA~~v~vG~~~ 368 (491)
T 1zfj_A 292 YDAGVDVVKVGIGPGSICTTRV-VAG-VGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALA-AGGNAVMLGSMF 368 (491)
T ss_dssp HHTTCSEEEECSSCCTTBCHHH-HTC-CCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHH-TTCSEEEESTTT
T ss_pred HHcCCCEEEECccCCcceEEee-ecC-CCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHH-cCCcceeeCHHh
Confidence 8999999988411 110 001 12345666666655 46899999999999999999998 599999999999
Q ss_pred hhCccchh
Q 023070 171 LENPALFA 178 (287)
Q Consensus 171 l~nP~lf~ 178 (287)
+..++...
T Consensus 369 ~~~~e~~~ 376 (491)
T 1zfj_A 369 AGTDEAPG 376 (491)
T ss_dssp TTBSSCCC
T ss_pred hCCCcCcc
Confidence 97665443
No 162
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.65 E-value=4.9e-07 Score=83.74 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=108.5
Q ss_pred CCCEEEEecCCCH-HHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 8 DRPLFVQFCANDP-EILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 8 ~~p~~~Qi~g~~~-~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
..|+..-+...++ +.+.++++.++ .||..+.+..|+. +++.-.+.+++|++.+ ++++.++.
T Consensus 131 ~v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDa 195 (370)
T 1chr_A 131 AIPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDV 195 (370)
T ss_dssp EEEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEEC
T ss_pred ceeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 3455444544454 55666777666 6999999998742 4566678889999887 48999999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+.+|+.+++.++++.+++.|+.+|. +.- .+.|++.++++++.+++||.+.+.+.+++++.++++...+|.
T Consensus 196 n~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~ 265 (370)
T 1chr_A 196 NQAWDEQVASVYIPELEALGVELIE-------QPV---GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDV 265 (370)
T ss_dssp TTCCCTTHHHHHTHHHHTTTEEEEE-------CCS---CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 9999999999999999999988773 211 146788999999999999999999999999999999878999
Q ss_pred EEEeh
Q 023070 164 VLSAE 168 (287)
Q Consensus 164 VmiGR 168 (287)
|++--
T Consensus 266 v~~k~ 270 (370)
T 1chr_A 266 FSLKL 270 (370)
T ss_dssp EEECT
T ss_pred EEECc
Confidence 99843
No 163
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.64 E-value=5.6e-07 Score=77.78 Aligned_cols=144 Identities=9% Similarity=0.112 Sum_probs=96.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+.+-++.+||+.+.+.+. +.|+|+|.+|.+.+ ++.+.+.++.+++. ++.+.+-+....
T Consensus 64 ~~~~~v~lmv~d~~~~i~~~~--~agad~v~vH~~~~----------------~~~~~~~~~~i~~~-g~~igv~~~p~t 124 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVEPLA--KAGASGFTFHIEVS----------------RDNWQELIQSIKAK-GMRPGVSLRPGT 124 (228)
T ss_dssp CSEEEEEEESSCGGGGHHHHH--HHTCSEEEEEGGGC----------------TTTHHHHHHHHHHT-TCEEEEEECTTS
T ss_pred CCcEEEEEEecCHHHHHHHHH--HcCCCEEEECCCCc----------------ccHHHHHHHHHHHc-CCCEEEEEeCCC
Confidence 468899999999988755553 36899999995411 11124555565543 566666554433
Q ss_pred ChhhHHHHHHHHHHc--CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 88 NLQDTIKYAKMLEDA--GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~--G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
.. +..+.+.+. ++|+|.+.+...........+..++.++++++.. ++||++.|||+. +++.++++ .|+|++
T Consensus 125 ~~----e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~-aGaD~v 198 (228)
T 1h1y_A 125 PV----EEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAAS-AGANCI 198 (228)
T ss_dssp CG----GGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHHH-HTCCEE
T ss_pred CH----HHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHHH-cCCCEE
Confidence 32 223445555 8999988544322111111133457778888887 899999999986 89988887 499999
Q ss_pred EEehhhhhCccc
Q 023070 165 LSAESLLENPAL 176 (287)
Q Consensus 165 miGR~~l~nP~l 176 (287)
.+|++++..|+.
T Consensus 199 vvGsai~~~~d~ 210 (228)
T 1h1y_A 199 VAGSSIFGAAEP 210 (228)
T ss_dssp EESHHHHTSSCH
T ss_pred EECHHHHCCCCH
Confidence 999999987663
No 164
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.62 E-value=1.9e-06 Score=76.43 Aligned_cols=142 Identities=16% Similarity=0.129 Sum_probs=101.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+..+=|..++.++.+| ...|+|+|=|+.. .+ +++.+.++++..++ .+..+.+-+.
T Consensus 120 ~lPVl~Kdfi~d~~qi~ea---~~~GAD~VlLi~a--------------~L-~~~~l~~l~~~a~~-lGl~~lvevh--- 177 (272)
T 3tsm_A 120 SLPALRKDFLFDPYQVYEA---RSWGADCILIIMA--------------SV-DDDLAKELEDTAFA-LGMDALIEVH--- 177 (272)
T ss_dssp SSCEEEESCCCSTHHHHHH---HHTTCSEEEEETT--------------TS-CHHHHHHHHHHHHH-TTCEEEEEEC---
T ss_pred CCCEEECCccCCHHHHHHH---HHcCCCEEEEccc--------------cc-CHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 4577666666676654433 3458888877632 12 35667777777654 4666666542
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+. +-++++.+.|++.|-+..|..... ..|++...++.+.+ ++|||+.|||+|++|+.++.+ .|+|+|.
T Consensus 178 ~~----eEl~~A~~~ga~iIGinnr~l~t~-----~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~-~Ga~gvL 247 (272)
T 3tsm_A 178 DE----AEMERALKLSSRLLGVNNRNLRSF-----EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEK-SGIGTFL 247 (272)
T ss_dssp SH----HHHHHHTTSCCSEEEEECBCTTTC-----CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHT-TTCCEEE
T ss_pred CH----HHHHHHHhcCCCEEEECCCCCccC-----CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHH-cCCCEEE
Confidence 22 224566789999999988865421 46788888888776 699999999999999999987 6999999
Q ss_pred EehhhhhCccchhchh
Q 023070 166 SAESLLENPALFAGFR 181 (287)
Q Consensus 166 iGR~~l~nP~lf~~~~ 181 (287)
||.+++..++.-..++
T Consensus 248 VG~almr~~d~~~~~~ 263 (272)
T 3tsm_A 248 IGESLMRQHDVAAATR 263 (272)
T ss_dssp ECHHHHTSSCHHHHHH
T ss_pred EcHHHcCCcCHHHHHH
Confidence 9999999888766554
No 165
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.62 E-value=2.5e-07 Score=82.20 Aligned_cols=155 Identities=19% Similarity=0.246 Sum_probs=96.3
Q ss_pred CEEEEecCCCH--HHHHHHHHHHcCCCCEEEEec--cCCh---hhh-----hcCcccccccCChHHHHHHHHHHhhccCC
Q 023070 10 PLFVQFCANDP--EILLNAARRVEPYCDYVDINL--GCPQ---RIA-----RRGNYGAFLMDNLPLVKSLVEKLALNLNV 77 (287)
Q Consensus 10 p~~~Qi~g~~~--~~~~~aA~~~~~g~d~IdiN~--gcP~---~~~-----~~~~~G~~l~~~~~~~~~iv~~v~~~~~~ 77 (287)
-++.=|...+| +...+.++.+.+++|.|+|.+ .-|. +.. +.-..| -+.+.+.++++++++.+++
T Consensus 17 ~li~~i~~GdP~~~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G----~~~~~~~~~v~~ir~~~~~ 92 (271)
T 1ujp_A 17 ALIPYLTAGFPSREGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKG----MSVQGALELVREVRALTEK 92 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCCS
T ss_pred eEEEEecCCCCChHHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcCCC
Confidence 35655655555 566667775544499999963 3342 011 111112 3567788999999988889
Q ss_pred cEEEEecCCCCh---hhHHHHHHHHHHcCCCEEEEecc--------------------------CCCC------------
Q 023070 78 PVSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGR--------------------------TRDE------------ 116 (287)
Q Consensus 78 pv~vKiR~g~~~---~~~~~~a~~l~~~G~~~I~vh~r--------------------------t~~~------------ 116 (287)
||.+ + ..++. .....+++.+.++|++++++-.- +...
T Consensus 93 Pii~-m-~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gf 170 (271)
T 1ujp_A 93 PLFL-M-TYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGF 170 (271)
T ss_dssp CEEE-E-CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSC
T ss_pred CEEE-E-ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCC
Confidence 9887 2 11110 12345667777777776655110 0000
Q ss_pred -----cCCCCc------cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 117 -----KDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 117 -----~~~~~~------~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
..+.+| ....+.++++++.+++||++.|||+|++++.++ .|||+|++|+++...
T Consensus 171 iy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~---~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 171 VYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA---AVADGVVVGSALVRA 235 (271)
T ss_dssp EEEECC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH---TTSSEEEECHHHHHH
T ss_pred EEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh---cCCCEEEEChHHhcc
Confidence 000111 123578899999889999999999999999997 389999999998743
No 166
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.61 E-value=3.6e-07 Score=80.25 Aligned_cols=130 Identities=19% Similarity=0.204 Sum_probs=90.6
Q ss_pred HHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecCC-CChhhHHHHHHHHHHc
Q 023070 25 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVF-PNLQDTIKYAKMLEDA 102 (287)
Q Consensus 25 ~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~g-~~~~~~~~~a~~l~~~ 102 (287)
++...++.|+|.||+.+ ++|.....+.+.+.+-+.++++.++ .|+-|=+-.+ .+.++....++...++
T Consensus 116 Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~ea 185 (260)
T 3r12_A 116 EAIFAVESGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLA 185 (260)
T ss_dssp HHHHHHHHTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 34446778999999864 2566666788889988899888774 4443323323 3556677788888999
Q ss_pred CCCEEEEeccCCCCcCCCCccccHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhcCcc--EEEEehhhh
Q 023070 103 GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLL 171 (287)
Q Consensus 103 G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~--~~ipVi~nGgI~s~~da~~~l~~~gad--~VmiGR~~l 171 (287)
|+|+|--..... ++.+..+.++.+++. .+++|-++|||+|.+++.++++ .||+ |...|+.++
T Consensus 186 GADfVKTSTGf~------~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~-aGA~RiGtS~g~~I~ 251 (260)
T 3r12_A 186 GAHFVKTSTGFG------TGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIM-YGADRIGTSSGVKIV 251 (260)
T ss_dssp TCSEEECCCSSS------SCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH-TTCSEEEESCHHHHH
T ss_pred CcCEEEcCCCCC------CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH-cCCceeecchHHHHH
Confidence 999995441111 123555555555554 3699999999999999999998 5999 555555554
No 167
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.61 E-value=4.8e-07 Score=85.80 Aligned_cols=160 Identities=14% Similarity=0.122 Sum_probs=119.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChh------hhhc-----Cc------------ccccc--cCC
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQR------IARR-----GN------------YGAFL--MDN 60 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~------~~~~-----~~------------~G~~l--~~~ 60 (287)
+..|+-..+.+.+|+++++.++ .++.||..+.+.+|-... +.+. +. -|..+ ...
T Consensus 143 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (440)
T 3t6c_A 143 DGIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAY 222 (440)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHH
T ss_pred CeeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhh
Confidence 4456666677889999998887 567899999999874320 0000 00 00000 011
Q ss_pred hHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCC
Q 023070 61 LPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRI 138 (287)
Q Consensus 61 ~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~i 138 (287)
.+...+.+++||+++ ++++.++.+.+|+..+++++++.+++.|+.+|- +.- .+.+++.++++++.+++
T Consensus 223 ~~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~i 292 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE-------DPV---APENTEWLKMLRQQSST 292 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CSS---CGGGGGGHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE-------CCC---ChhhHHHHHHHHhhcCC
Confidence 456678899999887 689999999999999999999999999999883 211 13478888999999999
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
||.+.+.+.++.++.++++...+|.|++--+-.+...-
T Consensus 293 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~ 330 (440)
T 3t6c_A 293 PIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITP 330 (440)
T ss_dssp CEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHH
T ss_pred CEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHH
Confidence 99999999999999999998789999986655555443
No 168
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.61 E-value=1.3e-06 Score=81.31 Aligned_cols=137 Identities=15% Similarity=0.192 Sum_probs=112.2
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
..|+-..++..+|+.+++.++ .++.||..+.++.|. +++.-.+.++++++.+ ++++.+..+
T Consensus 131 ~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDaN 194 (379)
T 3r0u_A 131 SIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDAN 194 (379)
T ss_dssp EEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEECT
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeCC
Confidence 345667777889999888776 567899999999762 3566778889999887 589999999
Q ss_pred CCCChhhHHHHHHHHHH--cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 85 VFPNLQDTIKYAKMLED--AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~--~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
-+|+.++++++++.+++ .|+.+|- +.- .+.|++.++++++.+++||.++..+.++.++.++++...+|
T Consensus 195 ~~w~~~~A~~~~~~l~~~~~~l~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d 264 (379)
T 3r0u_A 195 QGWNLAQTKQFIEEINKYSLNVEIIE-------QPV---KYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACN 264 (379)
T ss_dssp TCCCHHHHHHHHHHHHTSCCCEEEEE-------CCS---CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCS
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEE-------CCC---CcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCC
Confidence 99999999999999999 6776662 211 13578999999999999999999999999999999987899
Q ss_pred EEEEehhh
Q 023070 163 GVLSAESL 170 (287)
Q Consensus 163 ~VmiGR~~ 170 (287)
.|++--+.
T Consensus 265 ~v~~k~~~ 272 (379)
T 3r0u_A 265 MINIKLAK 272 (379)
T ss_dssp EEEECHHH
T ss_pred EEEECccc
Confidence 99985443
No 169
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.59 E-value=5.1e-07 Score=79.93 Aligned_cols=145 Identities=16% Similarity=0.184 Sum_probs=91.6
Q ss_pred CCEEEEecC-CCHHHHHHHHHHHc-C-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 9 RPLFVQFCA-NDPEILLNAARRVE-P-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 9 ~p~~~Qi~g-~~~~~~~~aA~~~~-~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
.+++.+..+ .++++..+.++.+. . +.+.|.++.-. +. ..+ ++...++++.+++.+ ++.+..-.
T Consensus 66 ~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~-------d~--~~~---~~e~~~~~~~a~~~~~~g~~vi~~~ 133 (264)
T 1xm3_A 66 YTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVIG-------CS--RSL---LPDPVETLKASEQLLEEGFIVLPYT 133 (264)
T ss_dssp SEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCBC-------CT--TTC---CBCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeecC-------CC--ccc---ccchHHHHHHHHHHHCCCeEEEEEc
Confidence 456678877 78887666666543 3 45677776411 00 000 122345555554432 33333211
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
..+ .+.++++.+.|+++|...+...... .+..+++.++.+++..++||++.|||.+++|+.++++ .|||+
T Consensus 134 --~~~----~~~a~~~~~~gad~v~~~~~~~Gt~---~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~-~GAdg 203 (264)
T 1xm3_A 134 --SDD----VVLARKLEELGVHAIMPGASPIGSG---QGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAME-LGADG 203 (264)
T ss_dssp --CSC----HHHHHHHHHHTCSCBEECSSSTTCC---CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHH-TTCSE
T ss_pred --CCC----HHHHHHHHHhCCCEEEECCcccCCC---CCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH-cCCCE
Confidence 112 2357788899999993323221111 1123478889999888999999999999999999998 59999
Q ss_pred EEEehhhhhCcc
Q 023070 164 VLSAESLLENPA 175 (287)
Q Consensus 164 VmiGR~~l~nP~ 175 (287)
|.+|++++..++
T Consensus 204 ViVGSAi~~a~d 215 (264)
T 1xm3_A 204 VLLNTAVSGADD 215 (264)
T ss_dssp EEESHHHHTSSS
T ss_pred EEEcHHHhCCCC
Confidence 999999886544
No 170
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.59 E-value=7e-08 Score=84.52 Aligned_cols=89 Identities=18% Similarity=0.284 Sum_probs=75.7
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.+++++|+.+.+.|++.+++-.-+... .....+++.++++.+.+.+|+.+.|||+|.++++++|+ .|||-|.+|+.
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~---~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~-~GadkVii~t~ 106 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAK---DPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLD-CGVKRVVIGSM 106 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHH---CGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHH-TTCSEEEECTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCccc---ccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHH-cCCCEEEEccc
Confidence 478899999999999999986433221 11146789999999999999999999999999999998 59999999999
Q ss_pred hhhCccchhchhh
Q 023070 170 LLENPALFAGFRT 182 (287)
Q Consensus 170 ~l~nP~lf~~~~~ 182 (287)
++.||.++.++..
T Consensus 107 a~~~p~li~e~~~ 119 (243)
T 4gj1_A 107 AIKDATLCLEILK 119 (243)
T ss_dssp TTTCHHHHHHHHH
T ss_pred cccCCchHHHHHh
Confidence 9999999887643
No 171
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.59 E-value=4.1e-07 Score=85.90 Aligned_cols=155 Identities=10% Similarity=0.099 Sum_probs=112.5
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhh---cCcccc--------c--------ccCChHHHHHH
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR---RGNYGA--------F--------LMDNLPLVKSL 67 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~---~~~~G~--------~--------l~~~~~~~~~i 67 (287)
..|+-....+.+++++.+.++ .++.||..|-+..|.|..... ..+.+- . ..+..++..++
T Consensus 138 ~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 138 GVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 456666777889988877665 567899999999987642100 000000 0 00113456788
Q ss_pred HHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecC
Q 023070 68 VEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 145 (287)
Q Consensus 68 v~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGg 145 (287)
+++||+++ ++++.+..+-+|+.+++.++++.+++.|+.+|- +.- .+.+++.++++++.+++||++.+.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~ 287 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME-------DPT---PAENQACFRLIRQHTVTPIAVGEV 287 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CCS---CCSSGGGGHHHHTTCCSCEEECTT
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CCC---ChHHHHHHHHHHhcCCCCEEeCCC
Confidence 99999987 689999999999999999999999999999883 111 135778889999999999999999
Q ss_pred CCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 146 VRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 146 I~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+.+++++.++++...+|.|++--+-.+
T Consensus 288 ~~~~~~~~~~i~~ga~d~v~~k~~~~G 314 (426)
T 4e4f_A 288 FNSIWDCKQLIEEQLIDYIRTTITHAG 314 (426)
T ss_dssp CCSGGGTHHHHHTTCCSEECCCTTTTT
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 999999999999878999987543333
No 172
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.57 E-value=4.8e-07 Score=78.26 Aligned_cols=129 Identities=20% Similarity=0.280 Sum_probs=91.0
Q ss_pred HHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C-C----ChhhHHHHHH
Q 023070 25 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-P----NLQDTIKYAK 97 (287)
Q Consensus 25 ~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g-~----~~~~~~~~a~ 97 (287)
++...++.|+|.||+.+ ++|..+..+.+.+.+-+.++++.++ ...+|+=+ + . +.++....++
T Consensus 85 E~~~Ai~~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ 153 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCR 153 (231)
T ss_dssp HHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHH
Confidence 34446788999999875 2566666788999999999988874 22346433 1 2 4556677888
Q ss_pred HHHHcCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCcc--EEEEehhhh
Q 023070 98 MLEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLL 171 (287)
Q Consensus 98 ~l~~~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad--~VmiGR~~l 171 (287)
...++|+|+|--. |-.. ++.+..+.++.+++.+ +++|-++|||+|.+++.++++ .||+ |+..|+.++
T Consensus 154 ia~~aGADfVKTSTGf~~------~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~-aGa~RiGtS~g~~I~ 225 (231)
T 3ndo_A 154 VARDAGADFVKTSTGFHP------SGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLD-AGATRLGLSGSRAVL 225 (231)
T ss_dssp HHHHTTCSEEECCCSCCT------TCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHH-TTCSEEEESSHHHHH
T ss_pred HHHHHCcCEEEcCCCCCC------CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH-hcchhcccchHHHHH
Confidence 8899999999543 2210 1235555566555543 699999999999999999998 5999 555555554
No 173
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.56 E-value=6.3e-07 Score=83.10 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=102.0
Q ss_pred CEEEEecC-CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 10 PLFVQFCA-NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~g-~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
|+...++. .+++++.+.|+ .++.||+.|.++.+ |+...+.++++++.+ ++++.+..+-+
T Consensus 138 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~ 199 (375)
T 1r0m_A 138 EVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK------------------PGWDVQPVRATREAFPDIRLTVDANSA 199 (375)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTC
T ss_pred eeeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC------------------hHHHHHHHHHHHHHcCCCeEEEeCCCC
Confidence 44444443 48999988777 56789999999863 122345566776665 68899999889
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.++ +++++.+++.|+.+|- +. . .+.||+..+++++.+++||.+.+.+.+++++.++++...+|.|++
T Consensus 200 ~~~~~-~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 200 YTLAD-AGRLRQLDEYDLTYIE-------QP--L-AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp CCGGG-HHHHHTTGGGCCSCEE-------CC--S-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred CCHHH-HHHHHHHHhCCCcEEE-------CC--C-CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 99999 9999999999999884 21 1 146788999999999999999999999999999999888999998
No 174
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=98.55 E-value=1.1e-06 Score=82.23 Aligned_cols=146 Identities=12% Similarity=0.005 Sum_probs=111.3
Q ss_pred CCCCEEEEec---CCC--HH----HHHHHHH-HHcCCCCEEEEe-ccCChhhhhcCcccccccCChHHHHHHHHHHhhcc
Q 023070 7 EDRPLFVQFC---AND--PE----ILLNAAR-RVEPYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL 75 (287)
Q Consensus 7 ~~~p~~~Qi~---g~~--~~----~~~~aA~-~~~~g~d~IdiN-~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~ 75 (287)
+..|+-..++ +.+ ++ .+++.++ .++.||..+.++ .|-+ ..+++.-.+++++|++.+
T Consensus 131 ~~v~~y~s~~~~~~~~~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~ 197 (394)
T 3mqt_A 131 AQLTPYFTLYPSVAADATLSEIVEAYKPLIAKAKERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVI 197 (394)
T ss_dssp SSBCCEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEecCCCCCCcchhhhHHHHHHHHHHHHHcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHh
Confidence 3445555554 233 44 5555555 567899999994 4311 135677788999999886
Q ss_pred --CCcEEEEecCCC-ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHH
Q 023070 76 --NVPVSCKIRVFP-NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDV 152 (287)
Q Consensus 76 --~~pv~vKiR~g~-~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da 152 (287)
++++.++.+-+| +.++++++++.+++.|+++|. +.- .+.+++.++++++.+++||++.+.+.+++++
T Consensus 198 G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iE-------eP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 267 (394)
T 3mqt_A 198 GWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIE-------ACL---QHDDLIGHQKLAAAINTRLCGAEMSTTRFEA 267 (394)
T ss_dssp CSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEE-------SCS---CTTCHHHHHHHHHHSSSEEEECTTCCHHHHH
T ss_pred CCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCcCCHHHH
Confidence 689999999999 999999999999999999883 211 1357899999999999999999999999999
Q ss_pred HHHHHhcCccEEEEehhhhhCcc
Q 023070 153 QKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
.++++...+|.|++--+-.+...
T Consensus 268 ~~~l~~~~~d~v~~k~~~~GGit 290 (394)
T 3mqt_A 268 QEWLEKTGISVVQSDYNRCGGVT 290 (394)
T ss_dssp HHHHHHHCCSEECCCTTTSSCHH
T ss_pred HHHHHcCCCCeEecCccccCCHH
Confidence 99999888999998554444443
No 175
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.54 E-value=1.2e-06 Score=75.47 Aligned_cols=129 Identities=21% Similarity=0.222 Sum_probs=90.3
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C-CChhhHHHHHHHHH
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQDTIKYAKMLE 100 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g-~~~~~~~~~a~~l~ 100 (287)
.++-..++.|+|.||+.+ ++|.....+.+.+.+-+.++++.++-+ .+|+=+ + .+.++....++...
T Consensus 75 ~e~~~Ai~~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~ 143 (220)
T 1ub3_A 75 LEAALACARGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAI 143 (220)
T ss_dssp HHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHH
Confidence 334446788999999975 245555567888888888888877433 455322 1 34566777888889
Q ss_pred HcCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHh--hCCCcEEEecCCCCHHHHHHHHHhcCcc--EEEEehhhh
Q 023070 101 DAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKN--ALRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLL 171 (287)
Q Consensus 101 ~~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~--~~~ipVi~nGgI~s~~da~~~l~~~gad--~VmiGR~~l 171 (287)
++|+|+|-.. |-+ ++.+..+.++.+++ ..++||-++|||+|.+++.++++ .|++ |+..|+.++
T Consensus 144 eaGADfVKTsTGf~-------~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~-aGa~RiG~S~g~~I~ 211 (220)
T 1ub3_A 144 RGGADFLKTSTGFG-------PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLK-AGASRLGTSSGVALV 211 (220)
T ss_dssp HHTCSEEECCCSSS-------SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHH-TTCSEEEETTHHHHH
T ss_pred HhCCCEEEeCCCCC-------CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHH-CCCcccchhHHHHHH
Confidence 9999999543 222 12344555555555 45799999999999999999998 6999 666666554
No 176
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.53 E-value=3.6e-07 Score=80.88 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=67.5
Q ss_pred HHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 93 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 93 ~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
..++...+..|...+.+-+.. .+.+.+.++++++.+ ++||++.|||+|++++.++++ .|||+|.+|+++
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~--------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~-aGAD~VVVGSAa 259 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN--------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLD-SGADYVGFAGAL 259 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS--------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHH-TTCSEEEESGGG
T ss_pred HHHHHHHHHcCCCEEEEcCCC--------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHH-cCCCEEEECchh
Confidence 456666678888888776432 146789999999999 899999999999999999998 599999999999
Q ss_pred hhC--ccchhchh
Q 023070 171 LEN--PALFAGFR 181 (287)
Q Consensus 171 l~n--P~lf~~~~ 181 (287)
+.| |.++.++.
T Consensus 260 v~d~~Pelv~e~a 272 (286)
T 3vk5_A 260 EQPDWRSALAEIA 272 (286)
T ss_dssp SSTTHHHHHHHHH
T ss_pred hcCCCHHHHHHHH
Confidence 999 88888765
No 177
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.53 E-value=1.9e-06 Score=82.45 Aligned_cols=132 Identities=20% Similarity=0.157 Sum_probs=96.2
Q ss_pred cCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHH
Q 023070 16 CANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 16 ~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 94 (287)
.|-.++.+.++..++++|+|.|-|... . -..+.+.+.++.+++.. +++|.+-- --+.+
T Consensus 276 Vgv~~d~~eR~~aLv~AGvD~iviD~a--------h-------Ghs~~v~~~i~~ik~~~p~~~viaGN------VaT~e 334 (556)
T 4af0_A 276 IGTRPGDKDRLKLLAEAGLDVVVLDSS--------Q-------GNSVYQIEFIKWIKQTYPKIDVIAGN------VVTRE 334 (556)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEECCS--------C-------CCSHHHHHHHHHHHHHCTTSEEEEEE------ECSHH
T ss_pred eccCccHHHHHHHHHhcCCcEEEEecc--------c-------cccHHHHHHHHHHHhhCCcceEEecc------ccCHH
Confidence 466789999999999999999888631 1 13566788888888765 67887662 22345
Q ss_pred HHHHHHHcCCCEEEEe------ccCCCCcCCCCccccHHHHHHHH---hhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 95 YAKMLEDAGCSLLAVH------GRTRDEKDGKKFRADWNAIKAVK---NALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh------~rt~~~~~~~~~~~~~~~i~~i~---~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
-++.|.++|+|.|.|- ..|+.. ..-|.+.+..+..+. +..++|||+.|||++.-|+.++|. .|||.||
T Consensus 335 ~a~~Li~aGAD~vkVGiGpGSiCtTr~v--~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAla-aGAd~VM 411 (556)
T 4af0_A 335 QAAQLIAAGADGLRIGMGSGSICITQEV--MAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALA-LGASAVM 411 (556)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTBCCTTT--CCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH-TTCSEEE
T ss_pred HHHHHHHcCCCEEeecCCCCcccccccc--cCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhh-cCCCEEE
Confidence 6778889999999883 123322 122345565555554 345799999999999999999999 6999999
Q ss_pred Eehhhh
Q 023070 166 SAESLL 171 (287)
Q Consensus 166 iGR~~l 171 (287)
+|.-+-
T Consensus 412 lGsllA 417 (556)
T 4af0_A 412 MGGLLA 417 (556)
T ss_dssp ESTTTT
T ss_pred Echhhc
Confidence 997553
No 178
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.52 E-value=1.7e-06 Score=80.78 Aligned_cols=136 Identities=11% Similarity=0.161 Sum_probs=111.3
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEEEEe
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKI 83 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~vKi 83 (287)
..|+-..+...+|+.+.+.++ .++.||..|.+++|++ +++.-.+.++++++.+ ++++.+..
T Consensus 153 ~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDa 217 (391)
T 4e8g_A 153 RVPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDG 217 (391)
T ss_dssp EEECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEEC
T ss_pred cEEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeC
Confidence 346667788889999998777 5678999999998863 3455567778887764 57899999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+-+|+..++.++++.+++.++ +| ++. ..+++.++++++.+++||.+...+.+..++.++++...+|.
T Consensus 218 N~~w~~~~A~~~~~~L~~~~i-~i-------EeP-----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~ 284 (391)
T 4e8g_A 218 NRSLPSRDALRLSRECPEIPF-VL-------EQP-----CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDG 284 (391)
T ss_dssp TTCCCHHHHHHHHHHCTTSCE-EE-------ESC-----SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHHhhcCe-EE-------ecC-----CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCE
Confidence 999999999999999999887 66 221 25789999999999999999999999999999999878999
Q ss_pred EEEehhhh
Q 023070 164 VLSAESLL 171 (287)
Q Consensus 164 VmiGR~~l 171 (287)
|++--+-.
T Consensus 285 v~ik~~~~ 292 (391)
T 4e8g_A 285 FGMKLTRI 292 (391)
T ss_dssp EEEEHHHH
T ss_pred EEeCcccc
Confidence 99854443
No 179
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=98.52 E-value=1.6e-06 Score=81.50 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=107.1
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhh---cCccc----ccccC---ChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR---RGNYG----AFLMD---NLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~---~~~~G----~~l~~---~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
.+|+++++.++ .++.||..|.+..+.+....- ..+.| ..... ..+...+++++||+++ ++++.++.+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 47899988877 567899999998742211000 00111 11111 1456778899999886 689999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
-+|+.++++++++.+++.|+.+|..- ..+++.++++++.+++||++.+.+.+++++.++++...+|.|
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~P------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 289 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEID------------SYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVA 289 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEECC------------CSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEeC------------cCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEE
Confidence 99999999999999999999998621 247888999999999999999999999999999998789999
Q ss_pred EEeh
Q 023070 165 LSAE 168 (287)
Q Consensus 165 miGR 168 (287)
++--
T Consensus 290 ~~k~ 293 (409)
T 3go2_A 290 IVDT 293 (409)
T ss_dssp EECH
T ss_pred EeCC
Confidence 9843
No 180
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.51 E-value=1.2e-06 Score=81.00 Aligned_cols=128 Identities=10% Similarity=0.083 Sum_probs=101.7
Q ss_pred CEEEEecC-CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 10 PLFVQFCA-NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~g-~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
|+...++. .+++++.+.|+ .++.||+.|.++.+ |+...+.++++++.+ ++++.+..+-+
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~ 192 (369)
T 2zc8_A 131 EVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK------------------PGWDYEVLKAVREAFPEATLTADANSA 192 (369)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTC
T ss_pred eceEEecCCCCHHHHHHHHHHHHHhhhheeeeecC------------------hhHHHHHHHHHHHHcCCCeEEEecCCC
Confidence 44444443 48999988776 56789999999863 122345566666665 68899999889
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.++ +++++.+++.|+.+|. +. . .+.|++..+++++.+++||.+.+.+.+++++.++++...+|.|++
T Consensus 193 ~~~~~-~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 193 YSLAN-LAQLKRLDELRLDYIE-------QP--L-AYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp CCGGG-HHHHHGGGGGCCSCEE-------CC--S-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHH-HHHHHHHHhCCCcEEE-------CC--C-CcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 99999 9999999999999885 11 1 135788899999999999999999999999999999878999998
No 181
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.50 E-value=7.1e-07 Score=77.12 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=69.2
Q ss_pred hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.++....|...+-.|...+.+.+ +.. ..+.+.++++++.+ ++||++.|||+|++++.+++ . |||+|++|
T Consensus 139 ~e~~~~~a~~a~~~g~~~VYld~-sG~-------~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~-gAD~VVVG 208 (228)
T 3vzx_A 139 MDDIVAYARVSELLQLPIFYLEY-SGV-------LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-E-HADVIVVG 208 (228)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-TTS-------CCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEecC-CCC-------cCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-h-CCCEEEEC
Confidence 35666677777778899998876 321 13789999999999 79999999999999999988 3 99999999
Q ss_pred hhhhhCccchhchh
Q 023070 168 ESLLENPALFAGFR 181 (287)
Q Consensus 168 R~~l~nP~lf~~~~ 181 (287)
.++..||.++.++-
T Consensus 209 Sa~v~~p~~~~~~v 222 (228)
T 3vzx_A 209 NAVYEDFDRALKTV 222 (228)
T ss_dssp THHHHCHHHHHHHH
T ss_pred hHHhcCHHHHHHHH
Confidence 99999999988663
No 182
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.50 E-value=1.6e-06 Score=76.33 Aligned_cols=139 Identities=17% Similarity=0.195 Sum_probs=93.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+..+=|=.|+.++.+ ....|+|+|-|.. ..+. +.+.++++..+. .++.+.|-+.
T Consensus 106 ~lPvl~kdfI~d~~qi~~---a~~~GAD~VlL~~--------------~~l~--~~l~~l~~~a~~-lGl~~lvev~--- 162 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLEE---ARAFGASAALLIV--------------ALLG--ELTGAYLEEARR-LGLEALVEVH--- 162 (254)
T ss_dssp CSCEEEESCCCSHHHHHH---HHHTTCSEEEEEH--------------HHHG--GGHHHHHHHHHH-HTCEEEEEEC---
T ss_pred CCCEEECCcCCCHHHHHH---HHHcCCCEEEECc--------------cchH--HHHHHHHHHHHH-CCCeEEEEEC---
Confidence 346555555566654433 3346888888862 2222 456666665433 3444433332
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-----~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
+.+ + ++.+.+.|+++|-++.|.... ...|++...++.+.+ ++|+++.|||+|++|+.++.+ |+|
T Consensus 163 ~~~---E-~~~a~~~gad~IGvn~~~l~~-----~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~--Ga~ 231 (254)
T 1vc4_A 163 TER---E-LEIALEAGAEVLGINNRDLAT-----LHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG--LFD 231 (254)
T ss_dssp SHH---H-HHHHHHHTCSEEEEESBCTTT-----CCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT--TCS
T ss_pred CHH---H-HHHHHHcCCCEEEEccccCcC-----CCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc--CCC
Confidence 222 3 346678899999999886432 246777777777665 789999999999999998886 999
Q ss_pred EEEEehhhhhCccchhch
Q 023070 163 GVLSAESLLENPALFAGF 180 (287)
Q Consensus 163 ~VmiGR~~l~nP~lf~~~ 180 (287)
+|.||++++..++.-..+
T Consensus 232 gvlVGsAl~~~~d~~~~~ 249 (254)
T 1vc4_A 232 AVLIGTSLMRAPDLEAAL 249 (254)
T ss_dssp EEEECHHHHTSSCHHHHH
T ss_pred EEEEeHHHcCCCCHHHHH
Confidence 999999999988765544
No 183
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.50 E-value=5.9e-06 Score=72.95 Aligned_cols=156 Identities=17% Similarity=0.198 Sum_probs=98.2
Q ss_pred CEEEEecCCC--HHHHHHHHHHH-cCCCCEEEEec--cCCh---hhhhc-----CcccccccCChHHHHHHHHHHhhcc-
Q 023070 10 PLFVQFCAND--PEILLNAARRV-EPYCDYVDINL--GCPQ---RIARR-----GNYGAFLMDNLPLVKSLVEKLALNL- 75 (287)
Q Consensus 10 p~~~Qi~g~~--~~~~~~aA~~~-~~g~d~IdiN~--gcP~---~~~~~-----~~~G~~l~~~~~~~~~iv~~v~~~~- 75 (287)
.++.=|...+ .+...+.++.+ +.|+|.|+|++ ..|. +...+ -..| -+.+.+.++++++++.+
T Consensus 18 ~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G----~~~~~~~~~v~~ir~~~~ 93 (262)
T 2ekc_A 18 ALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNG----IRFEDVLELSETLRKEFP 93 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCT
T ss_pred eEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhhcC
Confidence 4554444444 46777777754 56899999973 3342 11110 1112 25677889999999888
Q ss_pred CCcEEEEecCCCChh---hHHHHHHHHHHcCCCEEEEecc--------------------------CCCC----------
Q 023070 76 NVPVSCKIRVFPNLQ---DTIKYAKMLEDAGCSLLAVHGR--------------------------TRDE---------- 116 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~---~~~~~a~~l~~~G~~~I~vh~r--------------------------t~~~---------- 116 (287)
++|+.+ + ..++.- ....+++.+.++|+++++++.- +...
T Consensus 94 ~~Pi~~-m-~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~ 171 (262)
T 2ekc_A 94 DIPFLL-M-TYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAAD 171 (262)
T ss_dssp TSCEEE-E-CCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCS
T ss_pred CCCEEE-E-ecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCC
Confidence 899877 2 111111 1246677777777777766321 0000
Q ss_pred -------cCCCCc---c---c-cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 117 -------KDGKKF---R---A-DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 117 -------~~~~~~---~---~-~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
..+..| + . ..+.++++++.+++||++.|||++++++.+ +. .|||+|++|++++..
T Consensus 172 gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~-~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 172 EMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IG-SFADGVVVGSALVKL 240 (262)
T ss_dssp SCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HH-TTSSEEEECHHHHHH
T ss_pred CCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HH-cCCCEEEECHHHHhh
Confidence 000111 0 1 136788999988999999999999999999 55 379999999999754
No 184
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.50 E-value=2.9e-06 Score=79.12 Aligned_cols=138 Identities=15% Similarity=0.099 Sum_probs=108.1
Q ss_pred CHHHHHHH-HHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 19 DPEILLNA-ARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 19 ~~~~~~~a-A~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
+|++..+. ++. .+.||..+.+..|++. +......++...+.++++|+.+ ++++.++.+-+|+..++++
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~--------~~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~ 217 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEV--------GRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIE 217 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTT--------CTTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCc--------ccccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHH
Confidence 56655554 444 3579999999998764 1222234667778899999886 6899999999999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
+++.+++.|+.+|- +.-. +.|++.++++++.+++||.+...+.++.++.++++...+|.|++--+-.+..
T Consensus 218 ~~~~l~~~~i~~iE-------eP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGi 287 (388)
T 3tcs_A 218 VGHMLQDHGFCHFE-------EPCP---YWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGGI 287 (388)
T ss_dssp HHHHHHHTTCCEEE-------CCSC---TTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTSH
T ss_pred HHHHHhhcCCeEEE-------CCCC---ccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCCH
Confidence 99999999998872 2111 3578999999999999999999999999999999987899998754444433
No 185
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.49 E-value=4.4e-07 Score=79.57 Aligned_cols=155 Identities=15% Similarity=0.186 Sum_probs=93.3
Q ss_pred CEEEEecCC--CHHHHHHHHHHH-cCCCCEEEEe--ccCCh---hhhhcCccccccc--CChHHHHHHHHHHhhccCCcE
Q 023070 10 PLFVQFCAN--DPEILLNAARRV-EPYCDYVDIN--LGCPQ---RIARRGNYGAFLM--DNLPLVKSLVEKLALNLNVPV 79 (287)
Q Consensus 10 p~~~Qi~g~--~~~~~~~aA~~~-~~g~d~IdiN--~gcP~---~~~~~~~~G~~l~--~~~~~~~~iv~~v~~~~~~pv 79 (287)
-++.=|... +++...+.++.+ +.|+|.|||. |.-|. +..++. .--+|. -+.+.+.++++++++. +|+
T Consensus 15 ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a-~~rAL~~g~~~~~~~~~~~~~r~~--~Pi 91 (252)
T 3tha_A 15 ANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADA-AKIALDQGVDIHSVFELLARIKTK--KAL 91 (252)
T ss_dssp EEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHH-HHHHHHTTCCHHHHHHHHHHCCCS--SEE
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHH-HHHHHHCCCCHHHHHHHHHHHhcC--CCE
Confidence 355555444 558888888855 5699999998 45554 111111 001111 2567788888888765 676
Q ss_pred EEEecCCCCh---hhHHHHHHHHHHcCCCEEEE--------------------------eccCCCC--------------
Q 023070 80 SCKIRVFPNL---QDTIKYAKMLEDAGCSLLAV--------------------------HGRTRDE-------------- 116 (287)
Q Consensus 80 ~vKiR~g~~~---~~~~~~a~~l~~~G~~~I~v--------------------------h~rt~~~-------------- 116 (287)
.+=. .++. .....|++.+.++|++.+++ .+.+...
T Consensus 92 vlm~--Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY 169 (252)
T 3tha_A 92 VFMV--YYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIY 169 (252)
T ss_dssp EEEC--CHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEE
T ss_pred EEEe--ccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEE
Confidence 5421 1110 01234555555555555544 1111100
Q ss_pred ---cCCCCccc------cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 117 ---KDGKKFRA------DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 117 ---~~~~~~~~------~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
..+.+|.. -.+.++++++.+++||++.+||++++++.++.+ +||||.+|++++
T Consensus 170 ~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~--~ADGVIVGSAiV 231 (252)
T 3tha_A 170 LLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK--VADGVIVGTSIV 231 (252)
T ss_dssp EECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT--TSSEEEECHHHH
T ss_pred EEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh--cCCEEEECHHHH
Confidence 01112211 135788888888999999999999999998765 599999999987
No 186
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.49 E-value=6e-06 Score=72.95 Aligned_cols=129 Identities=14% Similarity=0.126 Sum_probs=88.1
Q ss_pred HHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc---cCCcEEEEecC-CC------ChhhHHHH
Q 023070 26 AARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN---LNVPVSCKIRV-FP------NLQDTIKY 95 (287)
Q Consensus 26 aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~---~~~pv~vKiR~-g~------~~~~~~~~ 95 (287)
+.+.++.|+|.|++... +|+ .+.+.+.+.+.++++. .++|+.+=..+ |. +.+.....
T Consensus 98 ve~Ai~~Ga~~v~~~~n----------ig~---~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a 164 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIY----------PGS---GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYA 164 (263)
T ss_dssp HHHHHHTTCSEEEEEEC----------TTS---TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEe----------cCC---cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHH
Confidence 33456789999998641 121 1233444444444432 37888765443 11 33444555
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCC-cEEEecCCC--CHHHHHHHHH---hcCccEEEEehh
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRI-PVLANGNVR--HMEDVQKCLE---ETGCEGVLSAES 169 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~i-pVi~nGgI~--s~~da~~~l~---~~gad~VmiGR~ 169 (287)
++...+.|+|+|-+. +. .+.+.++++++.+++ ||++.|||+ +.+++.+.+. +.|++|+.+||+
T Consensus 165 ~~~a~~~GAD~vkt~--~~---------~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgra 233 (263)
T 1w8s_A 165 ARIALELGADAMKIK--YT---------GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRN 233 (263)
T ss_dssp HHHHHHHTCSEEEEE--CC---------SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHH
T ss_pred HHHHHHcCCCEEEEc--CC---------CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehh
Confidence 788899999999776 11 246778888888777 999999999 9999988873 269999999999
Q ss_pred hhhCccchh
Q 023070 170 LLENPALFA 178 (287)
Q Consensus 170 ~l~nP~lf~ 178 (287)
++..|+...
T Consensus 234 I~~~~dp~~ 242 (263)
T 1w8s_A 234 VWQRRDALK 242 (263)
T ss_dssp HHTSTTHHH
T ss_pred hcCCcCHHH
Confidence 998877443
No 187
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=98.48 E-value=1.4e-06 Score=81.48 Aligned_cols=124 Identities=7% Similarity=-0.097 Sum_probs=100.7
Q ss_pred HHHHHHH-HHcCCCCEEEEe-ccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCC-ChhhHHHHH
Q 023070 22 ILLNAAR-RVEPYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFP-NLQDTIKYA 96 (287)
Q Consensus 22 ~~~~aA~-~~~~g~d~IdiN-~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~-~~~~~~~~a 96 (287)
++++.++ .++.||..+.++ .|.+ ..+++...+++++||+.+ ++++.+..+-+| +.+++++++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~ 226 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLL 226 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHH
Confidence 5555555 567899999994 4421 135677788899999887 689999999999 999999999
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
+.+++.|+++|. +.. .+.+++.++++++.+++||++.+.+.+++++.++++...+|.|++--
T Consensus 227 ~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 227 NSIEDLELYFAE-------ATL---QHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp HHTGGGCCSEEE-------SCS---CTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHhhhcCCeEEE-------CCC---CchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 999999999883 211 13578999999999999999999999999999999987899998743
No 188
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.47 E-value=1e-06 Score=82.20 Aligned_cols=103 Identities=18% Similarity=0.310 Sum_probs=79.3
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCc
Q 023070 60 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 139 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ip 139 (287)
+++.+.++++.+++. +.++.++++. ....+.++.+.+.|++.+.+|++...+....+ ..+|+.+.++++.+++|
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~----~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~-~~~~~~i~~l~~~~~~p 213 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP----QNVREIAPIVIKAGADLLVIQGTLISAEHVNT-GGEALNLKEFIGSLDVP 213 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT----TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC------CHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC----ccHHHHHHHHHHCCCCEEEEeCCccccccCCC-cccHHHHHHHHHhcCCC
Confidence 788899999998876 8999998864 24567788888999999999976532222111 12677788999999999
Q ss_pred EEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 140 VLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 140 Vi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
|++ |||.|++++..+++ .|||+|++|+|.
T Consensus 214 vi~-ggi~t~e~a~~~~~-~Gad~i~vg~Gg 242 (393)
T 2qr6_A 214 VIA-GGVNDYTTALHMMR-TGAVGIIVGGGE 242 (393)
T ss_dssp EEE-ECCCSHHHHHHHHT-TTCSEEEESCCS
T ss_pred EEE-CCcCCHHHHHHHHH-cCCCEEEECCCc
Confidence 999 89999999999987 699999998754
No 189
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.47 E-value=8.6e-07 Score=93.68 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=80.9
Q ss_pred ChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCC------CCccccHHHHHHH
Q 023070 60 NLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG------KKFRADWNAIKAV 132 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~------~~~~~~~~~i~~i 132 (287)
+++.+.++++.+++.. ++||.+|+-... ...+.|+.+.++|+|+|+|.|........ ..+.+....+.++
T Consensus 1011 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~---gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev 1087 (1520)
T 1ofd_A 1011 SIEDLAQLIYDLHQINPEAQVSVKLVAEI---GIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEV 1087 (1520)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEEEEEECST---THHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEecCCC---ChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHH
Confidence 4566788999999887 899999975432 33456788999999999997654221100 0111223445555
Q ss_pred HhhC-------CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 133 KNAL-------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 133 ~~~~-------~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
.+.+ ++|||+.|||.|..|+.+++. .|||+|++||+++.-.
T Consensus 1088 ~~al~~~glr~~IpVIAdGGIrtG~DVakALa-LGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1088 HRVLMENQLRDRVLLRADGGLKTGWDVVMAAL-MGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp HHHHHHTTCGGGCEEEEESSCCSHHHHHHHHH-TTCSEEECSHHHHHHT
T ss_pred HHHHHhcCCCCCceEEEECCCCCHHHHHHHHH-cCCCeeEEcHHHHHHH
Confidence 4432 699999999999999999998 5999999999997644
No 190
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.46 E-value=8.4e-07 Score=93.56 Aligned_cols=109 Identities=14% Similarity=0.100 Sum_probs=80.1
Q ss_pred hHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCC------CCccccHHHHHHHH
Q 023070 61 LPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG------KKFRADWNAIKAVK 133 (287)
Q Consensus 61 ~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~------~~~~~~~~~i~~i~ 133 (287)
++.+.++++.+++.. ++||.+|+-... ...+.|+.+.++|+|+|+|.|........ ..+.+....+.++.
T Consensus 977 ~edl~~~I~~Lk~~~~~~PV~VKlv~~~---gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~ 1053 (1479)
T 1ea0_A 977 IEDLAQLIYDLKQINPDAKVTVKLVSRS---GIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVH 1053 (1479)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECCT---THHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCC---ChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHH
Confidence 466788999999887 899999975532 23446888999999999997553221100 01122234555555
Q ss_pred hhC-------CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 134 NAL-------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 134 ~~~-------~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
+.+ ++|||+.|||+|..|+.+++. .|||+|++||+++..
T Consensus 1054 ~al~~~glr~~VpVIAdGGIrtG~DVakALa-LGAdaV~iGTafL~a 1099 (1479)
T 1ea0_A 1054 QVLTLNRLRHRVRLRTDGGLKTGRDIVIAAM-LGAEEFGIGTASLIA 1099 (1479)
T ss_dssp HHHHTTTCTTTSEEEEESSCCSHHHHHHHHH-TTCSEEECCHHHHHH
T ss_pred HHHHHcCCCCCceEEEECCCCCHHHHHHHHH-cCCCeeeEcHHHHHH
Confidence 542 699999999999999999998 599999999999763
No 191
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.45 E-value=4.8e-07 Score=77.65 Aligned_cols=78 Identities=13% Similarity=0.217 Sum_probs=59.5
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++.+.+.|+|+|.+......+......+.+|+.++++++..++||++.||| +++++.++++ .|+|+|.+|++++..++
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~-~Ga~gv~vgs~i~~~~d 200 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQ-AGADGIAVMSGIFSSAE 200 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHH-TTCSEEEESHHHHTSSS
T ss_pred HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHH-cCCCEEEEhHHhhCCCC
Confidence 566778999999887642222111111467899999988889999999999 8999999998 69999999999987665
No 192
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.45 E-value=1.9e-06 Score=80.75 Aligned_cols=137 Identities=9% Similarity=0.024 Sum_probs=107.3
Q ss_pred CCEEEEec-CCC--HHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 023070 9 RPLFVQFC-AND--PEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 82 (287)
Q Consensus 9 ~p~~~Qi~-g~~--~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vK 82 (287)
.|+-..++ +.+ |+.+++.++ .++.||..|.++++ | ..+ .+.+++|++.+ ++++.+.
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~-------------~~d----~~~v~avR~a~G~~~~L~vD 211 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P-------------GWD----VEPLQETRRAVGDHFPLWTD 211 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T-------------TBS----HHHHHHHHHHHCTTSCEEEE
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c-------------chH----HHHHHHHHHhcCCCCEEEEe
Confidence 45555554 335 999988777 56779999999973 1 122 45677777765 6899999
Q ss_pred ecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
.+-+|+.++ .++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+...+.++.++.++++...+|
T Consensus 212 aN~~w~~~~-~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d 280 (400)
T 3mwc_A 212 ANSSFELDQ-WETFKAMDAAKCLFHE-------QPL---HYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGISN 280 (400)
T ss_dssp CTTCCCGGG-HHHHHHHGGGCCSCEE-------SCS---CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHH-HHHHHHHHhcCCCEEe-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCC
Confidence 999999988 8999999999998883 211 13579999999999999999999999999999999988899
Q ss_pred EEEEehhhhhCc
Q 023070 163 GVLSAESLLENP 174 (287)
Q Consensus 163 ~VmiGR~~l~nP 174 (287)
.|++--+-.+..
T Consensus 281 ~v~~k~~~~GGi 292 (400)
T 3mwc_A 281 IWNIKIQRVGGL 292 (400)
T ss_dssp EEEECHHHHTSH
T ss_pred EEEEcchhhCCH
Confidence 999865544443
No 193
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.45 E-value=4.2e-06 Score=77.83 Aligned_cols=139 Identities=12% Similarity=0.150 Sum_probs=108.6
Q ss_pred CCEEEEecCCCHHH-HHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 9 RPLFVQFCANDPEI-LLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~-~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
.|+-..+...+++. +.++++.++ .||..+.+..|+. +++.-.+.++++++.+ ++++.+..+
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 45544555556665 455556666 5899999997642 3455567788888876 488999999
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
-+|+..++.++++.+++.|+.+|- +.- .+.|++.++++++.+++||.+...+.++.++.++++...+|.|
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v 272 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIE-------QPI---SRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVF 272 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEE-------CCB---CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCcCeee-------CCC---CccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999998872 211 1358999999999999999999999999999999998889999
Q ss_pred EEehhhhh
Q 023070 165 LSAESLLE 172 (287)
Q Consensus 165 miGR~~l~ 172 (287)
++--+-.+
T Consensus 273 ~~k~~~~G 280 (382)
T 3dgb_A 273 ALKIAKNG 280 (382)
T ss_dssp EECHHHHT
T ss_pred EecccccC
Confidence 98544443
No 194
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.44 E-value=5.2e-06 Score=77.16 Aligned_cols=143 Identities=11% Similarity=0.103 Sum_probs=109.2
Q ss_pred CCCEEEEecCCCHHHHHH-HHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 023070 8 DRPLFVQFCANDPEILLN-AARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 83 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~-aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKi 83 (287)
..|+-..+...+++.+.+ +++.++ .||..+.+..|+. +++.-.+.++++++.+ ++++.+..
T Consensus 136 ~v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDa 200 (381)
T 3fcp_A 136 ALPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDV 200 (381)
T ss_dssp EEEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred ceeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 345555565567776544 555666 4899999998642 3556677888998887 47899999
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+-+|+..++.++++.+++.|+.+| ++.- .+.|++.++++++.+++||.+...+.+..++.++++..++|.
T Consensus 201 N~~~~~~~A~~~~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~ 270 (381)
T 3fcp_A 201 NQAWDAATGAKGCRELAAMGVDLI-------EQPV---SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGA 270 (381)
T ss_dssp TTCBCHHHHHHHHHHHHHTTCSEE-------ECCB---CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHHhhcCccce-------eCCC---CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCE
Confidence 999999999999999999999888 2211 135899999999999999999999999999999999888999
Q ss_pred EEEehhhhhCcc
Q 023070 164 VLSAESLLENPA 175 (287)
Q Consensus 164 VmiGR~~l~nP~ 175 (287)
|++--+-.+...
T Consensus 271 v~~k~~~~GGit 282 (381)
T 3fcp_A 271 YALKIAKAGGPN 282 (381)
T ss_dssp EEECHHHHTSTT
T ss_pred EEecccccCCHH
Confidence 998655444433
No 195
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.44 E-value=1.8e-06 Score=83.26 Aligned_cols=121 Identities=19% Similarity=0.169 Sum_probs=81.1
Q ss_pred HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-C-CcEEEEecCCCChhhHHHHHHHHHHcCCCE
Q 023070 29 RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-N-VPVSCKIRVFPNLQDTIKYAKMLEDAGCSL 106 (287)
Q Consensus 29 ~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~-~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~ 106 (287)
+++.|++.+.+... . | ++..+.+.++.+++.. + +||.++--. ..+-++.+.++|+++
T Consensus 250 l~e~gv~~l~Vd~~--------~--g-----~~~~~~~~i~~lk~~~~~~~~Vi~G~V~------t~~~a~~l~~aGad~ 308 (503)
T 1me8_A 250 LVEAGADVLCIDSS--------D--G-----FSEWQKITIGWIREKYGDKVKVGAGNIV------DGEGFRYLADAGADF 308 (503)
T ss_dssp HHHHTCSEEEECCS--------C--C-----CSHHHHHHHHHHHHHHGGGSCEEEEEEC------SHHHHHHHHHHTCSE
T ss_pred HHhhhccceEEecc--------c--C-----cccchhhHHHHHHHhCCCCceEeecccc------CHHHHHHHHHhCCCe
Confidence 45568887776532 0 1 2333556667777665 5 888877322 234567788999999
Q ss_pred EEEeccCCC----Cc-CCCCccccHHHHHHHHhhC---------CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 107 LAVHGRTRD----EK-DGKKFRADWNAIKAVKNAL---------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 107 I~vh~rt~~----~~-~~~~~~~~~~~i~~i~~~~---------~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+.| |.... .+ ....+.+.+..+.++.+.+ ++|||+.|||+++.|+.++|. .|||+||+|+.++.
T Consensus 309 I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAla-lGA~~V~iG~~~~~ 386 (503)
T 1me8_A 309 IKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA-MGADFIMLGRYFAR 386 (503)
T ss_dssp EEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHT
T ss_pred EEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHH-cCCCEEEECchhhc
Confidence 988 43221 00 0111234566666665432 699999999999999999998 59999999999874
No 196
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.44 E-value=2.6e-06 Score=73.76 Aligned_cols=148 Identities=18% Similarity=0.222 Sum_probs=99.6
Q ss_pred CEEEEecCCCHHHHHHHHHHHc-CCCCE--EEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc--cCCcEEEEec
Q 023070 10 PLFVQFCANDPEILLNAARRVE-PYCDY--VDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNVPVSCKIR 84 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~-~g~d~--IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~--~~~pv~vKiR 84 (287)
-+..+|...|...+.+..+.++ .|+|. +|+--|-=++|.+ +| .++++++++. .++|+.+++-
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~---~G----------~~~v~~ir~~~~~~~~~dvhLm 72 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT---FG----------HPVVESLRKQLGQDPFFDMHMM 72 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC---BC----------HHHHHHHHHHHCSSSCEEEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc---cC----------HHHHHHHHHhhCCCCcEEEEEE
Confidence 3678999999999999998765 57875 4443331112221 22 3466677766 4788888765
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCC--------------------------C-----------------cCCCC
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD--------------------------E-----------------KDGKK 121 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~--------------------------~-----------------~~~~~ 121 (287)
.. +. ..+++.+.++|++.|++|.-... . ..++.
T Consensus 73 v~-~p---~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~ 148 (228)
T 3ovp_A 73 VS-KP---EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFG 148 (228)
T ss_dssp CS-CG---GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTC
T ss_pred eC-CH---HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCC
Confidence 42 22 34566777899999999862110 0 00111
Q ss_pred c----cccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 122 F----RADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 122 ~----~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
| +..++.++++++.. ++||.+.|||+ ++.+.++.+ .|||.+.+||+++..++.
T Consensus 149 Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~~-aGAd~~VvGsaIf~a~dp 206 (228)
T 3ovp_A 149 GQKFMEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCAE-AGANMIVSGSAIMRSEDP 206 (228)
T ss_dssp SCCCCGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHHH-HTCCEEEESHHHHTCSCH
T ss_pred CcccCHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHHH-cCCCEEEEeHHHhCCCCH
Confidence 1 23456688888765 68999999995 799999988 599999999998876653
No 197
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.43 E-value=3.2e-06 Score=72.84 Aligned_cols=142 Identities=11% Similarity=0.164 Sum_probs=90.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEecc--CChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLG--CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 85 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~g--cP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~ 85 (287)
+.|+.+-++-++|+.+.+.+ .+.|+|+|-+|.. .+ +...++++.+++. ++.+.+-+..
T Consensus 68 ~~~~~v~l~vnd~~~~v~~~--~~~Gad~v~vh~~~~~~-----------------~~~~~~~~~~~~~-g~~ig~~~~p 127 (230)
T 1rpx_A 68 DLPLDVHLMIVEPDQRVPDF--IKAGADIVSVHCEQSST-----------------IHLHRTINQIKSL-GAKAGVVLNP 127 (230)
T ss_dssp CSCEEEEEESSSHHHHHHHH--HHTTCSEEEEECSTTTC-----------------SCHHHHHHHHHHT-TSEEEEEECT
T ss_pred CCcEEEEEEecCHHHHHHHH--HHcCCCEEEEEecCccc-----------------hhHHHHHHHHHHc-CCcEEEEeCC
Confidence 46888999999988766655 4579999999842 11 1124555555443 5556655554
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCCC-cCCCCccccHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhc
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE-KDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~-~~~~~~~~~~~~i~~i~~~~-----~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
+.+.+.. +.+ ..++++|.+.+..... .... .+..++.++++++.+ ++|+++.|||+ ++++.++++ .
T Consensus 128 ~t~~e~~----~~~-~~~~d~vl~~~~~pg~~g~~~-~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~-a 199 (230)
T 1rpx_A 128 GTPLTAI----EYV-LDAVDLVLIMSVNPGFGGQSF-IESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIE-A 199 (230)
T ss_dssp TCCGGGG----TTT-TTTCSEEEEESSCTTCSSCCC-CTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHH-H
T ss_pred CCCHHHH----HHH-HhhCCEEEEEEEcCCCCCccc-cHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHH-c
Confidence 4332221 111 2579998554433211 0111 122345566666655 79999999998 799988887 5
Q ss_pred CccEEEEehhhhhCccch
Q 023070 160 GCEGVLSAESLLENPALF 177 (287)
Q Consensus 160 gad~VmiGR~~l~nP~lf 177 (287)
|+|+|.+|+++...++.-
T Consensus 200 Gad~vvvgSaI~~a~dp~ 217 (230)
T 1rpx_A 200 GANALVAGSAVFGAPDYA 217 (230)
T ss_dssp TCCEEEESHHHHTSSCHH
T ss_pred CCCEEEEChhhhCCCCHH
Confidence 999999999999866643
No 198
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.42 E-value=6.5e-06 Score=69.60 Aligned_cols=140 Identities=16% Similarity=0.225 Sum_probs=88.4
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 8 DRPLFVQFCAND-PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 8 ~~p~~~Qi~g~~-~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
+.|+++-+...| |+.+.+.+ ++.|+|+|-+|.+.. .+.+.++++.+++. +.++.+-+- .
T Consensus 53 ~~~i~~~l~~~di~~~~~~~a--~~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~-s 112 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADIA--FKAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI-G 112 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHHH--HHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-T
T ss_pred CCeEEEEEEecCccHHHHHHH--HhCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe-c
Confidence 568888777788 88866433 457999999996422 22344555555432 455444331 1
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
. .+..+.++.+.+.|++++.++ +.+... .+.. ... +.++++++. ++||++.|||+ ++++.++++ .|||+|.
T Consensus 113 ~--~~p~~~~~~~~~~g~d~v~~~~~~~~~~-~g~~-~~~-~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~-aGad~vv 184 (207)
T 3ajx_A 113 I--EDKATRAQEVRALGAKFVEMHAGLDEQA-KPGF-DLN-GLLAAGEKA-RVPFSVAGGVK-VATIPAVQK-AGAEVAV 184 (207)
T ss_dssp C--SSHHHHHHHHHHTTCSEEEEECCHHHHT-STTC-CTH-HHHHHHHHH-TSCEEEESSCC-GGGHHHHHH-TTCSEEE
T ss_pred C--CChHHHHHHHHHhCCCEEEEEecccccc-cCCC-chH-HHHHHhhCC-CCCEEEECCcC-HHHHHHHHH-cCCCEEE
Confidence 1 222233455667799999554 443211 1110 122 556665544 78999999998 788888887 6999999
Q ss_pred EehhhhhCcc
Q 023070 166 SAESLLENPA 175 (287)
Q Consensus 166 iGR~~l~nP~ 175 (287)
+||+++..++
T Consensus 185 vGsaI~~~~d 194 (207)
T 3ajx_A 185 AGGAIYGAAD 194 (207)
T ss_dssp ESHHHHTSSS
T ss_pred EeeeccCCCC
Confidence 9999987655
No 199
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.41 E-value=1e-06 Score=75.24 Aligned_cols=144 Identities=15% Similarity=0.118 Sum_probs=98.0
Q ss_pred CCCEEEEecCCCHHHHHHHHHH-HcCCCCEEEEeccCChhhh---------hcCcccccccCChHHH-------------
Q 023070 8 DRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIA---------RRGNYGAFLMDNLPLV------------- 64 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~---------~~~~~G~~l~~~~~~~------------- 64 (287)
+.|+++-+.+.+++++.+.++. ++.|++.|++++-+|.... ..-++|. ++ +.+.+
T Consensus 12 ~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~ 89 (207)
T 2yw3_A 12 ESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVS 89 (207)
T ss_dssp HHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEE
T ss_pred hCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEc
Confidence 4689999999999999888875 4668999999998886421 1123343 22 22222
Q ss_pred ----HHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccc-cHHHHHHHHhhC-CC
Q 023070 65 ----KSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA-DWNAIKAVKNAL-RI 138 (287)
Q Consensus 65 ----~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~-~~~~i~~i~~~~-~i 138 (287)
.++++..+. .++|+...+. + ..+ +....+.|+|+|.+++- . .. -.+.++.++... ++
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~G~~---t---~~e-~~~A~~~Gad~v~~fpa---~------~~gG~~~lk~l~~~~~~i 152 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLPGVL---T---PTE-VERALALGLSALKFFPA---E------PFQGVRVLRAYAEVFPEV 152 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEEEEC---S---HHH-HHHHHHTTCCEEEETTT---T------TTTHHHHHHHHHHHCTTC
T ss_pred CCCCHHHHHHHHH-hCCCEEecCC---C---HHH-HHHHHHCCCCEEEEecC---c------cccCHHHHHHHHhhCCCC
Confidence 233333332 3455544321 2 222 34556789999999641 1 11 257788888877 89
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
||++.|||+ ++++.++++ .|+++|.+|++++.
T Consensus 153 pvvaiGGI~-~~n~~~~l~-aGa~~vavgSai~~ 184 (207)
T 2yw3_A 153 RFLPTGGIK-EEHLPHYAA-LPNLLAVGGSWLLQ 184 (207)
T ss_dssp EEEEBSSCC-GGGHHHHHT-CSSBSCEEESGGGS
T ss_pred cEEEeCCCC-HHHHHHHHh-CCCcEEEEehhhhC
Confidence 999999997 699999998 69999999999876
No 200
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.41 E-value=1e-06 Score=82.22 Aligned_cols=133 Identities=11% Similarity=-0.019 Sum_probs=104.0
Q ss_pred ecCCCH-------HHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 023070 15 FCANDP-------EILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 84 (287)
Q Consensus 15 i~g~~~-------~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR 84 (287)
+.+.+| +.+.++|+ .++.||+.|.++.|-... +-.. .++++...++++++++.+ ++++.+...
T Consensus 137 ~~~~~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~------~~~~-~~~~~~~~e~v~avR~~~g~d~~l~vDan 209 (392)
T 3p3b_A 137 FDDLHLADERAAVALMQEEAMQGYAKGQRHFKIKVGRGGR------HMPL-WEGTKRDIAIVRGISEVAGPAGKIMIDAN 209 (392)
T ss_dssp BTTTTCCSHHHHHHHHHHHHHHHHHTTCCCEEEECCHHHH------TSCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECT
T ss_pred cCCCCcccccchHHHHHHHHHHHHHhCCCEEEECcCcCcc------cCCc-cccHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 333678 88888776 567799999998762110 0001 125677788999998876 688999988
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh-----CCCcEEEecCCCCHHHHHHHHHhc
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-----LRIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~-----~~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
-+|+.++++++++.+++.|+++|- + ..+ .+++..+++++. +++||++.+ +.+++++.++++..
T Consensus 210 ~~~~~~~ai~~~~~l~~~~i~~iE-------~--P~~--~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~ 277 (392)
T 3p3b_A 210 NAYNLNLTKEVLAALSDVNLYWLE-------E--AFH--EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRG 277 (392)
T ss_dssp TCCCHHHHHHHHHHTTTSCEEEEE-------C--SSS--CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEe-------c--CCc--ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcC
Confidence 899999999999999999887663 1 111 578889999988 899999999 99999999999987
Q ss_pred CccEEEE
Q 023070 160 GCEGVLS 166 (287)
Q Consensus 160 gad~Vmi 166 (287)
.+|.|++
T Consensus 278 ~~d~v~i 284 (392)
T 3p3b_A 278 RVDVLQY 284 (392)
T ss_dssp SCCEECC
T ss_pred CCCEEEe
Confidence 7999887
No 201
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.40 E-value=1.5e-06 Score=75.35 Aligned_cols=144 Identities=13% Similarity=0.203 Sum_probs=92.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+.+.+..+||+.|.+.+ ++.|+|+|-++.... + .+...+.++.+++ .+.-+.+-+....
T Consensus 62 ~~~~~vhlmv~dp~~~i~~~--~~aGadgv~vh~e~~----------~-----~~~~~~~~~~i~~-~g~~~gv~~~p~t 123 (230)
T 1tqj_A 62 KKTLDVHLMIVEPEKYVEDF--AKAGADIISVHVEHN----------A-----SPHLHRTLCQIRE-LGKKAGAVLNPST 123 (230)
T ss_dssp CSEEEEEEESSSGGGTHHHH--HHHTCSEEEEECSTT----------T-----CTTHHHHHHHHHH-TTCEEEEEECTTC
T ss_pred CCcEEEEEEccCHHHHHHHH--HHcCCCEEEECcccc----------c-----chhHHHHHHHHHH-cCCcEEEEEeCCC
Confidence 46899999999998877554 445899999994310 1 0123455555543 2444444443333
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-----~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
..+. .+.+. .++|+|.+.+...........+..++.++++++.. ++||.+-|||+. +++.++.+ .|||
T Consensus 124 ~~e~----~~~~~-~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~-aGad 196 (230)
T 1tqj_A 124 PLDF----LEYVL-PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLE-AGAN 196 (230)
T ss_dssp CGGG----GTTTG-GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHH-HTCC
T ss_pred cHHH----HHHHH-hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHH-cCCC
Confidence 2221 22222 37998866443322111111245577888888766 799999999987 99998887 5999
Q ss_pred EEEEehhhhhCccc
Q 023070 163 GVLSAESLLENPAL 176 (287)
Q Consensus 163 ~VmiGR~~l~nP~l 176 (287)
++.+|++++..|+.
T Consensus 197 ~vvvGSai~~a~d~ 210 (230)
T 1tqj_A 197 AIVAGSAVFNAPNY 210 (230)
T ss_dssp EEEESHHHHTSSCH
T ss_pred EEEECHHHHCCCCH
Confidence 99999999987664
No 202
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=98.38 E-value=4.9e-06 Score=78.33 Aligned_cols=150 Identities=9% Similarity=0.084 Sum_probs=115.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhh-----cCccccccc---CChHHHHHHHHHHhhcc--
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR-----RGNYGAFLM---DNLPLVKSLVEKLALNL-- 75 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~-----~~~~G~~l~---~~~~~~~~iv~~v~~~~-- 75 (287)
+..|+...+.+.+++++.+.++ .++.||..+.+..|.+..+.. ......... ++++...+.++++++.+
T Consensus 141 ~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~ 220 (421)
T 4hnl_A 141 TAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN 220 (421)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence 4567777888889999988777 567899999999886542111 111112222 23456677788888877
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHH
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~ 155 (287)
++.+.+...-+|+.++++++++.+++.++.+| ++.- .+.|++.++++++.+++||.+.-.+.++.++.++
T Consensus 221 ~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 290 (421)
T 4hnl_A 221 QFQMLHDVHERLHPNQAIQFAKAAEPYQLFFL-------EDIL---PPDQSHWLTQLRSQSATPIATGELFNNPMEWQEL 290 (421)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEE-------ECCS---CGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHH
T ss_pred CceEeccccccCCHHHHHHHHHHhhhhhhccc-------ccCC---cccchHHHHHHHhcCCCCeecCcceehhHHHHHH
Confidence 57888888889999999999999999999887 2211 1357888999999999999999999999999999
Q ss_pred HHhcCccEEEE
Q 023070 156 LEETGCEGVLS 166 (287)
Q Consensus 156 l~~~gad~Vmi 166 (287)
++...+|.|++
T Consensus 291 i~~~a~d~v~~ 301 (421)
T 4hnl_A 291 VKNRQIDFMRA 301 (421)
T ss_dssp HHTTCCSEECC
T ss_pred HhcCCceEEEe
Confidence 99878998876
No 203
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.38 E-value=6.4e-07 Score=79.12 Aligned_cols=159 Identities=22% Similarity=0.236 Sum_probs=93.7
Q ss_pred CCCCEEEEecCCCHH-HHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCc-EEEEe
Q 023070 7 EDRPLFVQFCANDPE-ILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVP-VSCKI 83 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~-~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~p-v~vKi 83 (287)
.+.|++.|+.+.||- .+....+.+ +.||.+| +|+ |..-...+.|...|..+.--..++++.|+.+-..- +|+=+
T Consensus 93 ~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~ 169 (286)
T 2p10_A 93 RHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPY 169 (286)
T ss_dssp SSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCE
T ss_pred CCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 378999999999985 444444544 4599999 997 43333344455555554444445555554332111 11110
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEEecc-CCCCcCCCCc---ccc-HHHHHHHHhh-----CCCcEEEec-CCCCHHHH
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAVHGR-TRDEKDGKKF---RAD-WNAIKAVKNA-----LRIPVLANG-NVRHMEDV 152 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~vh~r-t~~~~~~~~~---~~~-~~~i~~i~~~-----~~ipVi~nG-gI~s~~da 152 (287)
-...+-++.+.++|+|.|.+|.. |..+.-+... ..+ -+.+.++.+. .++.|++.| +|.+++|+
T Consensus 170 ------v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv 243 (286)
T 2p10_A 170 ------VFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDA 243 (286)
T ss_dssp ------ECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHH
T ss_pred ------cCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHH
Confidence 11234466677999999999955 3322111110 122 2344443332 356666555 99999999
Q ss_pred HHHHHhc-CccEEEEehhhhhCc
Q 023070 153 QKCLEET-GCEGVLSAESLLENP 174 (287)
Q Consensus 153 ~~~l~~~-gad~VmiGR~~l~nP 174 (287)
..+++.+ |+||+..++++..=|
T Consensus 244 ~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 244 RFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp HHHHHHCTTCCEEEESHHHHHHH
T ss_pred HHHHhcCCCccEEEeehhhhcCC
Confidence 9999854 699999999987655
No 204
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.36 E-value=3.9e-06 Score=92.13 Aligned_cols=145 Identities=12% Similarity=0.127 Sum_probs=98.7
Q ss_pred CCCEEEEecCCCHHH---HHHHHH-HHcCCCCE--EEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEE
Q 023070 8 DRPLFVQFCANDPEI---LLNAAR-RVEPYCDY--VDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC 81 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~---~~~aA~-~~~~g~d~--IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~v 81 (287)
++|+++.++-.+|+. +.+..+ +++.|++. |.+.+|.|. ++.+.++++. .++++..
T Consensus 637 ~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~---------------~e~~~~~l~~----~gi~~i~ 697 (2060)
T 2uva_G 637 GRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS---------------IEVANEYIQT----LGIRHIS 697 (2060)
T ss_dssp TCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC---------------HHHHHHHHHH----SCCSEEE
T ss_pred CCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCC---------------HHHHHHHHHH----cCCeEEE
Confidence 578888887766653 223333 34557766 777666552 2234444443 2666653
Q ss_pred EecCCCChhhHHHHHHHHHHcCCCEEE---EeccCCCCcCCCC--ccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHH
Q 023070 82 KIRVFPNLQDTIKYAKMLEDAGCSLLA---VHGRTRDEKDGKK--FRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 156 (287)
Q Consensus 82 KiR~g~~~~~~~~~a~~l~~~G~~~I~---vh~rt~~~~~~~~--~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l 156 (287)
.+ . +..++.+.+..+.++|+|.|+ +.|....+..+.. ...-+..+.++++.+++|||+.|||.+.+++.++|
T Consensus 698 ~v-~--~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aal 774 (2060)
T 2uva_G 698 FK-P--GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYL 774 (2060)
T ss_dssp EC-C--CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHH
T ss_pred ec-C--CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHh
Confidence 32 2 336677777788999999998 6665443322110 01235778999999999999999999999999999
Q ss_pred -----------HhcCccEEEEehhhhhCcc
Q 023070 157 -----------EETGCEGVLSAESLLENPA 175 (287)
Q Consensus 157 -----------~~~gad~VmiGR~~l~nP~ 175 (287)
. .|||+|++|+.++.-+.
T Consensus 775 tg~ws~~~g~pa-lGAdgV~~GT~f~~t~E 803 (2060)
T 2uva_G 775 TGSWSTKFGYPP-MPFDGCMFGSRMMTAKE 803 (2060)
T ss_dssp HTCGGGTTTSCC-CCCSCEEESGGGGGBTT
T ss_pred cCcchhhcCCCC-CCCCEEEEchhhhcCcC
Confidence 6 59999999999987654
No 205
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.35 E-value=2.6e-06 Score=74.51 Aligned_cols=148 Identities=12% Similarity=0.114 Sum_probs=100.3
Q ss_pred CEEEEecCCCHHHHHHHHHHHc-CCCCE--EEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecC
Q 023070 10 PLFVQFCANDPEILLNAARRVE-PYCDY--VDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 85 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~-~g~d~--IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~ 85 (287)
.+..+|...|...+.+..+.++ .|+|. +|+--|-=++|.. +| .++++++++.. +.|+.+.+-.
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit---~G----------~~~v~~lr~~~p~~~ldvHLmv 95 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLT---FG----------PMVLKALRDYGITAGMDVHLMV 95 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC---CC----------HHHHHHHHHHTCCSCEEEEEEC
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchh---cC----------HHHHHHHHHhCCCCeEEEEEee
Confidence 4779999999999999998765 57875 4443232112211 22 36677777777 8899988754
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCC--------------------------C-----------------cCCCCc
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRD--------------------------E-----------------KDGKKF 122 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~--------------------------~-----------------~~~~~~ 122 (287)
. ++..+++.+.++|+++|++|.-... . ..++.|
T Consensus 96 ~----~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgG 171 (246)
T 3inp_A 96 K----PVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGG 171 (246)
T ss_dssp S----SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--
T ss_pred C----CHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCC
Confidence 2 3344677788999999999852110 0 001111
Q ss_pred ----cccHHHHHHHHhh-----CCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 123 ----RADWNAIKAVKNA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 123 ----~~~~~~i~~i~~~-----~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
+..++.++++++. .+++|.+.|||+ ++.+.++.+ .|||.+.+|++++..++.
T Consensus 172 Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~-aGAD~~V~GSaIf~a~dp 232 (246)
T 3inp_A 172 QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAV-CGVNAFVAGSAIFNSDSY 232 (246)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHT-TTCCEEEESHHHHTSSCH
T ss_pred cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHH-cCCCEEEEehHHhCCCCH
Confidence 2345667777654 358999999997 688988887 699999999998876553
No 206
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.34 E-value=1e-06 Score=74.79 Aligned_cols=78 Identities=17% Similarity=0.329 Sum_probs=60.3
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
+..+.+.|+++|.+++...........+.+|+.++++++..++||++.|||+ ++++.++++ .|+|+|++|++++..|+
T Consensus 121 ~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~-~Ga~gv~vgs~i~~~~d 198 (215)
T 1xi3_A 121 ALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLK-TGVDGIAVISAVMGAED 198 (215)
T ss_dssp HHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHT-TTCSEEEESHHHHTSSS
T ss_pred HHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHH-cCCCEEEEhHHHhCCCC
Confidence 3456778999999876432211111124689999999988899999999999 999999887 69999999999998765
No 207
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=98.32 E-value=1.6e-05 Score=73.52 Aligned_cols=135 Identities=12% Similarity=0.110 Sum_probs=107.0
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecC
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 85 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~ 85 (287)
..|+...+...+|+.+.+.++ .++.||..|.+..|.. +++.-.+.++++++.+ +.++.+..+-
T Consensus 132 ~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~ 196 (365)
T 3ik4_A 132 QLETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNC 196 (365)
T ss_dssp EEEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTT
T ss_pred ceeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 345556777889999988776 5678999999987632 3566677788888766 5778888888
Q ss_pred CCChhhHHHHHHHH--HHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 86 FPNLQDTIKYAKML--EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 86 g~~~~~~~~~a~~l--~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
+|+..++.++++.+ ++.++.+|- +.- .+.|++.++++++.+++||.+...+.++.++.++++...+|.
T Consensus 197 ~~~~~~A~~~~~~L~~~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~ 266 (365)
T 3ik4_A 197 GYDVERALAFCAACKAESIPMVLFE-------QPL---PREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASV 266 (365)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEE-------CCS---CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSE
T ss_pred CCCHHHHHHHHHHHhhCCCCceEEE-------CCC---CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCE
Confidence 99999999999999 666665552 211 135789999999999999999999999999999998888999
Q ss_pred EEEe
Q 023070 164 VLSA 167 (287)
Q Consensus 164 VmiG 167 (287)
|++-
T Consensus 267 v~ik 270 (365)
T 3ik4_A 267 INIK 270 (365)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9873
No 208
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=98.31 E-value=1.2e-05 Score=76.25 Aligned_cols=127 Identities=8% Similarity=0.043 Sum_probs=104.6
Q ss_pred CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 17 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
|.+|+++++.|+ .++.||..+.++.|+ +++.-.+.++++++.+ ++++.+..+-+|+..+++
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~ 262 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAV 262 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 568999998877 567899999999764 3555567788888876 688999999999999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh---CCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~---~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
++++.+++.++.+| ++.- .+.|++.++++++. +++||.+.-.+.+..++.++++...+|.|++--+
T Consensus 263 ~~~~~L~~~~~~~i-------EeP~---~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~ 331 (441)
T 4a35_A 263 EWMSKLAKFKPLWI-------EEPT---SPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSC 331 (441)
T ss_dssp HHHHHHGGGCCSEE-------ECCS---CTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHhhcccCccEE-------eCCC---CcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECcc
Confidence 99999999998887 2211 13578888889886 7899999999999999999999888999987433
No 209
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.25 E-value=1.6e-05 Score=69.52 Aligned_cols=144 Identities=15% Similarity=0.100 Sum_probs=93.4
Q ss_pred CCEEEEecC-CCHHHHHHHHHHHcC--CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC
Q 023070 9 RPLFVQFCA-NDPEILLNAARRVEP--YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 85 (287)
Q Consensus 9 ~p~~~Qi~g-~~~~~~~~aA~~~~~--g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~ 85 (287)
.++...-.| .++++...++++..+ |-+.|.|-.- .+. -.++.|+....+-.+.+.+. ++.|.-.+
T Consensus 64 ~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi-------~d~--~~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~-- 131 (268)
T 2htm_A 64 VRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVI-------PDP--TYLLPDPLETLKAAERLIEE-DFLVLPYM-- 131 (268)
T ss_dssp SEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCC-------SCT--TTTCCCHHHHHHHHHHHHHT-TCEECCEE--
T ss_pred hhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeec-------cCc--cccCcCHHHHHHHHHHHHHC-CCEEeecc--
Confidence 345555555 688888888886543 4566554321 111 12556666665555555332 32222111
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHh-hCC-CcEEEecCCCCHHHHHHHHHhcCccE
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALR-IPVLANGNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~-~~~-ipVi~nGgI~s~~da~~~l~~~gad~ 163 (287)
. .+ ..+++++++.|++.|---+..-.. ..+-.+.+.++.+++ ..+ +|||+.|||.+++|+..+++ .|||+
T Consensus 132 ~---~D-~~~ak~l~~~G~~aVmPlg~pIGs---G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Ame-LGAdg 203 (268)
T 2htm_A 132 G---PD-LVLAKRLAALGTATVMPLAAPIGS---GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVME-LGLDA 203 (268)
T ss_dssp C---SC-HHHHHHHHHHTCSCBEEBSSSTTT---CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHH-TTCCE
T ss_pred C---CC-HHHHHHHHhcCCCEEEecCccCcC---CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHH-cCCCE
Confidence 1 22 378999999999988432321111 112346778899998 678 99999999999999999999 69999
Q ss_pred EEEehhhhh
Q 023070 164 VLSAESLLE 172 (287)
Q Consensus 164 VmiGR~~l~ 172 (287)
|++|+++..
T Consensus 204 VlVgSAI~~ 212 (268)
T 2htm_A 204 VLVNTAIAE 212 (268)
T ss_dssp EEESHHHHT
T ss_pred EEEChHHhC
Confidence 999999874
No 210
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.23 E-value=3.8e-05 Score=67.27 Aligned_cols=140 Identities=13% Similarity=0.123 Sum_probs=103.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|++-|=|.-++-+..+ ....|+|+|=|+..+ + +.+.+.++++..++ .+..+.|-+.
T Consensus 101 ~lPvLrKDfi~~~~qi~e---a~~~GAD~ilLi~a~--------------l-~~~~l~~l~~~a~~-lGl~~lvEv~--- 158 (251)
T 1i4n_A 101 CRPILAKDFYIDTVQVKL---ASSVGADAILIIARI--------------L-TAEQIKEIYEAAEE-LGMDSLVEVH--- 158 (251)
T ss_dssp CSCEEEECCCCSTHHHHH---HHHTTCSEEEEEGGG--------------S-CHHHHHHHHHHHHT-TTCEEEEEEC---
T ss_pred CCCEEEeeCCCCHHHHHH---HHHcCCCEEEEeccc--------------C-CHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 568888888877765444 345699999998531 1 23567777777665 4777777653
Q ss_pred ChhhHHHHHHHHHHc-CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 88 NLQDTIKYAKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~-G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
+.++ ++++.+. |++.|-++.|.... ...|++...++.+.+ ++++|+.|||+|++|+.++.+ . +|+|
T Consensus 159 ~~eE----~~~A~~l~g~~iIGinnr~l~t-----~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~-~-a~av 227 (251)
T 1i4n_A 159 SRED----LEKVFSVIRPKIIGINTRDLDT-----FEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRG-K-VNAV 227 (251)
T ss_dssp SHHH----HHHHHTTCCCSEEEEECBCTTT-----CCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTT-T-CSEE
T ss_pred CHHH----HHHHHhcCCCCEEEEeCccccc-----CCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHH-h-CCEE
Confidence 2222 5666788 99999999886532 146788788887776 589999999999999999987 5 9999
Q ss_pred EEehhhhhCccchhch
Q 023070 165 LSAESLLENPALFAGF 180 (287)
Q Consensus 165 miGR~~l~nP~lf~~~ 180 (287)
.||.+++..++.-..+
T Consensus 228 LVG~aimr~~d~~~~~ 243 (251)
T 1i4n_A 228 LVGTSIMKAENPRRFL 243 (251)
T ss_dssp EECHHHHHCSSHHHHH
T ss_pred EEcHHHcCCcCHHHHH
Confidence 9999999887765544
No 211
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.23 E-value=1.2e-05 Score=69.83 Aligned_cols=128 Identities=17% Similarity=0.107 Sum_probs=83.3
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEEEEecCC-CChhhHHHHHHHH
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKIRVF-PNLQDTIKYAKML 99 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~vKiR~g-~~~~~~~~~a~~l 99 (287)
.++-..++.|+|.||+.+. +|+... .+.+-+.++++.+ +.|+-+=+-.+ .+.++....++..
T Consensus 92 ~e~~~Av~~GAdEID~vin----------ig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria 157 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPH----------LSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSS 157 (234)
T ss_dssp HHHHHHHHHTCCEEEECCC----------GGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecc----------chHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHH
Confidence 3344467789999998642 343222 4555555555544 35653322222 2456667788888
Q ss_pred HHcCCCEEEEe-ccCCCCcCCCCccccHHHHHH--HHhhCCCcEEEecCCCCHHHHHHHHHhcCcc--EEEEehhhhh
Q 023070 100 EDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKA--VKNALRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLLE 172 (287)
Q Consensus 100 ~~~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~--i~~~~~ipVi~nGgI~s~~da~~~l~~~gad--~VmiGR~~l~ 172 (287)
.++|+|+|-.. |.+. .+.+..+.++. +++.+++||-++|||++.+++.++++ .|++ |+..|+.++.
T Consensus 158 ~eaGADfVKTsTG~~~------~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~-aGa~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 158 RRAGADIVKTSTGVYT------KGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAVG-AGADIIGTSSAVKVLE 228 (234)
T ss_dssp HHTTCSEEESCCSSSC------CCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHH-TTCSEEEETTHHHHHH
T ss_pred HHhCCCEEEeCCCCCC------CCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHH-cCccccchHHHHHHHH
Confidence 99999999543 2211 02355555555 66666699999999999999999997 6999 7766666554
No 212
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=98.23 E-value=1.7e-05 Score=74.10 Aligned_cols=128 Identities=17% Similarity=0.165 Sum_probs=105.6
Q ss_pred HHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHHH
Q 023070 20 PEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 20 ~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a 96 (287)
|+++++.++ .++. ||..+.+..| .+++.-.+.++++++.+ ++++.+..+-+|+..+++.++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~ 232 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAG 232 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHH
Confidence 688888766 6677 9999999875 13555667788888776 678999998899999999999
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
+.+++.|+.+|- + |.+ |++.++++++.+++||.+...+.++.++.++++...+|.|++--+-.+...
T Consensus 233 ~~l~~~~i~~iE-------q----P~~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit 299 (398)
T 4dye_A 233 IALEELDLEYLE-------D----PCV-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIA 299 (398)
T ss_dssp HHHGGGCCSEEE-------C----CSS-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHhhcCCCEEc-------C----CCC-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHH
Confidence 999999999883 2 123 889999999999999999999999999999999888999998665555444
No 213
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.21 E-value=9.3e-06 Score=69.22 Aligned_cols=141 Identities=12% Similarity=0.129 Sum_probs=84.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+.+-++-+|++++.+.+ .+.|+|+|.+|.+.+ ..+. ++++.+++. +..+.+-+....
T Consensus 61 ~~~~~v~l~v~d~~~~i~~~--~~~gad~v~vh~~~~--------------~~~~---~~~~~~~~~-g~~i~~~~~~~t 120 (220)
T 2fli_A 61 KLVFDCHLMVVDPERYVEAF--AQAGADIMTIHTEST--------------RHIH---GALQKIKAA-GMKAGVVINPGT 120 (220)
T ss_dssp CSEEEEEEESSSGGGGHHHH--HHHTCSEEEEEGGGC--------------SCHH---HHHHHHHHT-TSEEEEEECTTS
T ss_pred CCCEEEEEeecCHHHHHHHH--HHcCCCEEEEccCcc--------------ccHH---HHHHHHHHc-CCcEEEEEcCCC
Confidence 45788888888887654333 445899999985311 2333 344444432 455555543322
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCc-CCCCccccHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEK-DGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~-~~~~~~~~~~~i~~i~~~~-----~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
..+. ++.+ ..++++|.+-+...... ... .+..++.++.+++.. ++||++.|||+ ++++.++++ .|+
T Consensus 121 ~~e~----~~~~-~~~~d~vl~~~~~~g~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~-~Ga 192 (220)
T 2fli_A 121 PATA----LEPL-LDLVDQVLIMTVNPGFGGQAF-IPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYE-AGA 192 (220)
T ss_dssp CGGG----GGGG-TTTCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHH-HTC
T ss_pred CHHH----HHHH-HhhCCEEEEEEECCCCccccc-CHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHH-cCC
Confidence 2221 2222 24589885533221110 111 122235556665543 79999999998 799988777 599
Q ss_pred cEEEEehhhhhCccc
Q 023070 162 EGVLSAESLLENPAL 176 (287)
Q Consensus 162 d~VmiGR~~l~nP~l 176 (287)
|+|.+||+++..++.
T Consensus 193 d~vvvGsai~~~~d~ 207 (220)
T 2fli_A 193 NVFVAGSYLFKASDL 207 (220)
T ss_dssp CEEEESHHHHTSSCH
T ss_pred CEEEEChHHhCCCCH
Confidence 999999999986663
No 214
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.20 E-value=1.4e-05 Score=71.60 Aligned_cols=142 Identities=12% Similarity=0.226 Sum_probs=87.6
Q ss_pred CCCEEEEecCCCH---H-----HHHHHHHHHcCCCCEEEEe--ccCChhhhhcCcccccccCChHHHHHHHHHHhhccCC
Q 023070 8 DRPLFVQFCANDP---E-----ILLNAARRVEPYCDYVDIN--LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV 77 (287)
Q Consensus 8 ~~p~~~Qi~g~~~---~-----~~~~aA~~~~~g~d~IdiN--~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~ 77 (287)
+.|+|+.+.++.. + .+..+...++.|+|+|++. .|.+.. . ...+.+.++++...+ .++
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~-------~----~~l~~i~~v~~~a~~-~Gl 172 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYE-------H----QSIKNIIQLVDAGMK-VGM 172 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTH-------H----HHHHHHHHHHHHHHT-TTC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCcH-------H----HHHHHHHHHHHHHHH-cCC
Confidence 6789998877652 1 1123334567899998876 331110 0 011223344444332 368
Q ss_pred cEEEEecCC----CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCC-CHHHH
Q 023070 78 PVSCKIRVF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVR-HMEDV 152 (287)
Q Consensus 78 pv~vKiR~g----~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~-s~~da 152 (287)
|+.+=...| .+.+.....++...++|+|+|-+.. + . +.++++.+.+++||++.||+. +.+++
T Consensus 173 pvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~-t---------~---e~~~~vv~~~~vPVv~~GG~~~~~~~~ 239 (295)
T 3glc_A 173 PTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY-V---------E---KGFERIVAGCPVPIVIAGGKKLPEREA 239 (295)
T ss_dssp CEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEEC-C---------T---TTHHHHHHTCSSCEEEECCSCCCHHHH
T ss_pred EEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCC-C---------H---HHHHHHHHhCCCcEEEEECCCCCHHHH
Confidence 887743222 2322234577888899999987751 1 0 225777778899999999998 44444
Q ss_pred ----HHHHHhcCccEEEEehhhhhCcc
Q 023070 153 ----QKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 153 ----~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
..+++ .|++|+.+||.++..|+
T Consensus 240 l~~v~~ai~-aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 240 LEMCWQAID-QGASGVDMGRNIFQSDH 265 (295)
T ss_dssp HHHHHHHHH-TTCSEEEESHHHHTSSS
T ss_pred HHHHHHHHH-hCCeEEEeHHHHhcCcC
Confidence 44456 59999999999997654
No 215
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.19 E-value=3.7e-06 Score=73.51 Aligned_cols=81 Identities=9% Similarity=0.113 Sum_probs=60.6
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~--~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
++...+.|+|+|.+.+...........+..++.++++++. .++||++-||| +++++.++++ .|+|+|.+|++++..
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~-aGa~gvav~sai~~a 225 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLD-AGARRIVVVRAITSA 225 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHH-TTCCCEEESHHHHTC
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHH-cCCCEEEEeHHHhCC
Confidence 4556679999999976533221111124678999999876 58999999999 8999999998 699999999999976
Q ss_pred ccchh
Q 023070 174 PALFA 178 (287)
Q Consensus 174 P~lf~ 178 (287)
++...
T Consensus 226 ~dp~~ 230 (243)
T 3o63_A 226 DDPRA 230 (243)
T ss_dssp SSHHH
T ss_pred CCHHH
Confidence 66433
No 216
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=98.17 E-value=2.6e-05 Score=73.21 Aligned_cols=127 Identities=12% Similarity=0.119 Sum_probs=97.0
Q ss_pred HHHcCCCCEEEEeccCChhhhhcCcccccc-cCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCC
Q 023070 28 RRVEPYCDYVDINLGCPQRIARRGNYGAFL-MDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGC 104 (287)
Q Consensus 28 ~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l-~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~ 104 (287)
+.++.||..+.++ |...... +-|... ..+++...+.+++||+.+ ++++.+...-+|+.++++++++.+++.|+
T Consensus 166 ~~~~~G~~~~K~~---~~~~~~~-K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i 241 (410)
T 3dip_A 166 SLVAEGYAAMKIW---PFDDFAS-ITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGV 241 (410)
T ss_dssp HHHHTTCSEEEEC---TTHHHHT-TCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTC
T ss_pred HHHHcCCCEEEEC---CccCccc-cccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 3567899999997 2211110 112211 123556778899999887 58999999889999999999999999999
Q ss_pred CEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 105 SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 105 ~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+|- +... .+.+++..+++++.+++||.+.+.+.+++++.++++...+|.|++-
T Consensus 242 ~~iE-------qP~~--~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 242 LWVE-------DPIA--KMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp SEEE-------CCBS--CTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CEEE-------CCCC--CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 9884 1100 1347888999999999999999999999999999998789999883
No 217
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.17 E-value=7.5e-05 Score=65.16 Aligned_cols=55 Identities=13% Similarity=0.251 Sum_probs=47.4
Q ss_pred cccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 123 RADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 123 ~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
..|++...++...+ ++.+|+.+||.|++|+.++.+ .|+|+|.||.++|.+|+-.+
T Consensus 188 ~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~-~G~~a~LVGealmr~~d~~~ 244 (258)
T 4a29_A 188 EINKENQRKLISMIPSNVVKVAKLGISERNEIEELRK-LGVNAFLISSSLMRNPEKIK 244 (258)
T ss_dssp CBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHH-TTCCEEEECHHHHHCTTHHH
T ss_pred ccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHH-CCCCEEEECHHHhCCCcHHH
Confidence 57888888888775 588899999999999998887 69999999999999987444
No 218
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.14 E-value=4.8e-06 Score=71.33 Aligned_cols=78 Identities=18% Similarity=0.320 Sum_probs=58.4
Q ss_pred HHHHHHcCCCEEEEeccCCCC-cCCCCccccHHHHHHHHhhCC-CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 96 AKMLEDAGCSLLAVHGRTRDE-KDGKKFRADWNAIKAVKNALR-IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~-~~~~~~~~~~~~i~~i~~~~~-ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
++.+.+.|+|++.+....... ..+...+.+|+.++++++.++ +||++.|||. ++++.++++ .|+|+|.+|++++..
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~-~Ga~gv~vgs~i~~~ 206 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQ-AGADGVSMISAISQA 206 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHH-TTCSEEEESHHHHTS
T ss_pred HHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHH-cCCCEEEEhHHhhcC
Confidence 455668899999873221111 111012457999999998887 9999999998 999999887 699999999999875
Q ss_pred cc
Q 023070 174 PA 175 (287)
Q Consensus 174 P~ 175 (287)
++
T Consensus 207 ~d 208 (227)
T 2tps_A 207 ED 208 (227)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 219
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.14 E-value=3.8e-05 Score=66.19 Aligned_cols=129 Identities=13% Similarity=0.158 Sum_probs=84.5
Q ss_pred HHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEe--cCC-CChhhHHHHHHH
Q 023070 22 ILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI--RVF-PNLQDTIKYAKM 98 (287)
Q Consensus 22 ~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKi--R~g-~~~~~~~~~a~~ 98 (287)
...++.. ++.|+|.||+-+ ++|.....+.+.+.+-+.++++.++- ..+|+ -.+ .+.++....++.
T Consensus 69 k~~E~~~-i~~GAdEID~Vi----------nig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~i 136 (226)
T 1vcv_A 69 RIALVSR-LAEVADEIDVVA----------PIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDI 136 (226)
T ss_dssp HHHHHHH-HTTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCCEEEEec----------chhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHH
Confidence 3455556 888999999875 24555556788888888888887742 24553 222 345667788888
Q ss_pred HHHcCCCEEEEe-ccCC---CCcCCCCccccHHHHHHHHhh---C--CCcEEEecCCCCHHHHHHHHHh--cCcc
Q 023070 99 LEDAGCSLLAVH-GRTR---DEKDGKKFRADWNAIKAVKNA---L--RIPVLANGNVRHMEDVQKCLEE--TGCE 162 (287)
Q Consensus 99 l~~~G~~~I~vh-~rt~---~~~~~~~~~~~~~~i~~i~~~---~--~ipVi~nGgI~s~~da~~~l~~--~gad 162 (287)
..++|+|+|-.+ |-+. ......++.+..+.++.+++. + ++||-++|||+|.+++.++++. .|++
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 999999999553 3320 000011123444444444443 4 4999999999999999999983 1565
No 220
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.13 E-value=1.3e-05 Score=69.40 Aligned_cols=70 Identities=7% Similarity=0.086 Sum_probs=58.5
Q ss_pred cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchhch
Q 023070 102 AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 102 ~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
.|..+|.+-. +.. +.+.+.++++++.+ ++||++.|||+|++++.++.+ |||+|.+|.++..||..+.++
T Consensus 158 ~g~~~vY~e~-sG~-------~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~--gAD~VVVGSai~~~~~~~~e~ 227 (235)
T 3w01_A 158 YRLPVMYIEY-SGI-------YGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA--IADTIIVGDIIYKDIKKALKT 227 (235)
T ss_dssp TCCSEEEEEC-TTS-------CCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT--TSSEEEECTHHHHCHHHHHHT
T ss_pred cCCCEEEEec-CCC-------cCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc--CCCEEEECCceecCHHHHHHH
Confidence 4778887654 211 13689999999998 899999999999999998775 899999999999999988876
Q ss_pred h
Q 023070 181 R 181 (287)
Q Consensus 181 ~ 181 (287)
-
T Consensus 228 v 228 (235)
T 3w01_A 228 V 228 (235)
T ss_dssp T
T ss_pred H
Confidence 3
No 221
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=98.11 E-value=2.1e-05 Score=73.58 Aligned_cols=127 Identities=13% Similarity=0.012 Sum_probs=97.4
Q ss_pred HHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCC
Q 023070 28 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCS 105 (287)
Q Consensus 28 ~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~ 105 (287)
+.++.||..+.+..|-|...... .|..-..+++...+.+++|++.+ ++++.+...-+|+.++++++++.+++.|+.
T Consensus 162 ~~~~~G~~~~Kik~g~~~~~~~~--~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 239 (400)
T 4dxk_A 162 SLLEDGITAMKIWPFDAAAEKTR--GQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTF 239 (400)
T ss_dssp HHHHTTCCEEEECTTHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCS
T ss_pred HHHHhCCCEEEEcCCCccccccc--cCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 45678999999986633210000 11100123566788899999887 589999998899999999999999999999
Q ss_pred EEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 106 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 106 ~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+|. +.- .+.+++..+++++.+++||.+.+.+.+++++.++++...+|.|++
T Consensus 240 ~iE-------eP~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 240 WHE-------DPI---KMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp EEE-------CCB---CTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred EEE-------cCC---CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 885 111 124677789999999999999999999999999999877999987
No 222
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.07 E-value=8.1e-06 Score=79.52 Aligned_cols=92 Identities=11% Similarity=0.141 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCH-----------HHHHHHHHh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHM-----------EDVQKCLEE 158 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~-----------~da~~~l~~ 158 (287)
.+..++|+.+.+.|++.|++..-+...........+.+.++++++.+.+||++.|||++. +++.++++
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~- 358 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR- 358 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHH-
Confidence 478899999999999999886544321100001245788999999899999999999998 55999998
Q ss_pred cCccEEEEehhhhh-------------Cccchhchhh
Q 023070 159 TGCEGVLSAESLLE-------------NPALFAGFRT 182 (287)
Q Consensus 159 ~gad~VmiGR~~l~-------------nP~lf~~~~~ 182 (287)
.|||.|.||++++. +|.+++++..
T Consensus 359 aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 359 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp HTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred cCCCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 59999999999987 4788888754
No 223
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.06 E-value=7.1e-06 Score=71.19 Aligned_cols=73 Identities=12% Similarity=0.187 Sum_probs=58.5
Q ss_pred HHHHHHHHcCC-----CEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 94 KYAKMLEDAGC-----SLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 94 ~~a~~l~~~G~-----~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+.++.+.+.|. .+|.+-+ +.. ..+.+.++++++.+ ++||++.|||+|++++.++++ |||+|.+|
T Consensus 149 e~~~~~a~~g~~~l~~~~Vyl~~-~G~-------~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~--gAd~VIVG 218 (234)
T 2f6u_A 149 ELAASYALVGEKLFNLPIIYIEY-SGT-------YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR--YADTIIVG 218 (234)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-TTS-------CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH--HSSEEEEC
T ss_pred HHHHHHHHhhhhhcCCCEEEEeC-CCC-------cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh--CCCEEEEC
Confidence 34555655555 6666554 211 35789999999999 999999999999999999887 79999999
Q ss_pred hhhhhCccc
Q 023070 168 ESLLENPAL 176 (287)
Q Consensus 168 R~~l~nP~l 176 (287)
+++..+|.-
T Consensus 219 Sa~v~~~~~ 227 (234)
T 2f6u_A 219 NVIYEKGID 227 (234)
T ss_dssp HHHHHHCHH
T ss_pred hHHHhCHHH
Confidence 999999863
No 224
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.99 E-value=5.5e-06 Score=73.09 Aligned_cols=81 Identities=12% Similarity=0.088 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.++.++|+.+.+.|++.+++-.-+. .+.+.++++.+.+++||...|||++. ++.+++ .|||-|.+|..
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~---------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l--~Ga~~Viigs~ 105 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP---------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL--KWASKVIVTSW 105 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS---------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT--TTCSCEEECGG
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC---------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh--cCCCEEEECcH
Confidence 5788999999999999998853332 46788999999999999999999987 999999 59999999999
Q ss_pred hhhC-----ccchhchhh
Q 023070 170 LLEN-----PALFAGFRT 182 (287)
Q Consensus 170 ~l~n-----P~lf~~~~~ 182 (287)
++.| |.++.++-.
T Consensus 106 a~~~~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 106 LFTKEGHFQLKRLERLTE 123 (260)
T ss_dssp GBCTTCCBCHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHH
Confidence 9999 998887753
No 225
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.98 E-value=3.8e-05 Score=73.55 Aligned_cols=124 Identities=15% Similarity=0.107 Sum_probs=78.5
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcC
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAG 103 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G 103 (287)
.++..+++.++|.+-+.- .|+ ....+.+.++.+++..++||.+|-=. + .+-++.+. |
T Consensus 231 ~~a~~l~~~gvd~lvvdt-----------a~G----~~~~~L~~I~~l~~~~~vpvi~k~v~--~----~~~a~~l~--G 287 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDT-----------AHA----HNLKAIKSMKEMRQKVDADFIVGNIA--N----PKAVDDLT--F 287 (486)
T ss_dssp HHHHHHHHTTCSEEEEEC-----------SCC----CCHHHHHHHHHHHHTCCSEEEEEEEC--C----HHHHTTCT--T
T ss_pred HHHHHHHHhcCCceEEEe-----------cCC----cEeehhhHHHHHHHHhCCccccCCcC--C----HHHHHHhh--C
Confidence 333345667888775541 111 22334555677777778999888311 1 23344455 9
Q ss_pred CCEEEEeccCCCCc------C--CCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 104 CSLLAVHGRTRDEK------D--GKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 104 ~~~I~vh~rt~~~~------~--~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
++.|.| |...... . +.+....+..+.++.+..++|||+.|||.+..|+.++|. .|||+||+|+.++.
T Consensus 288 ~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kala-lGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 288 ADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIA-AGADAVMLGNLLAG 362 (486)
T ss_dssp SSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHH-TTCSEEEESTTTTT
T ss_pred CCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHH-cCCCceeeChhhhc
Confidence 999998 3211100 0 110012233445555556899999999999999999998 69999999999985
No 226
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.98 E-value=6.6e-05 Score=64.84 Aligned_cols=138 Identities=8% Similarity=0.127 Sum_probs=94.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHH---HHhhccCCcEEEEec
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVE---KLALNLNVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~---~v~~~~~~pv~vKiR 84 (287)
+.|+.+.+.-+||+.|.+.. ++ +|.|-+|..... .+ +.+.++ .+++ .+.-+.+-+.
T Consensus 64 ~~~~dvhLmv~dp~~~i~~~--~~--Ad~itvH~ea~~-------------~~---~~~~i~~~~~i~~-~G~k~gvaln 122 (227)
T 1tqx_A 64 SIFFDVHLMVEYPEKYVPLL--KT--SNQLTFHFEALN-------------ED---TERCIQLAKEIRD-NNLWCGISIK 122 (227)
T ss_dssp SCEEEEEEESSCGGGGGGGC--TT--SSEEEEEGGGGT-------------TC---HHHHHHHHHHHHT-TTCEEEEEEC
T ss_pred CCcEEEEEEEcCHHHHHHHH--Hh--CCEEEEeecCCc-------------cC---HHHHHHHHHHHHH-cCCeEEEEeC
Confidence 57899999999999775332 22 899999954210 02 334555 6654 3555555554
Q ss_pred CCCChhhHHHHHHHHHHcC-CCEEEEec---cCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhc
Q 023070 85 VFPNLQDTIKYAKMLEDAG-CSLLAVHG---RTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G-~~~I~vh~---rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
.... .+.++.+.+.| +|+|.+.+ ....|.. .+..++.++++++.. +++|.+.|||+ ++.+.++.+ .
T Consensus 123 p~tp----~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f---~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~-a 193 (227)
T 1tqx_A 123 PKTD----VQKLVPILDTNLINTVLVMTVEPGFGGQSF---MHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISAS-H 193 (227)
T ss_dssp TTSC----GGGGHHHHTTTCCSEEEEESSCTTCSSCCC---CGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHH-H
T ss_pred CCCc----HHHHHHHhhcCCcCEEEEeeeccCCCCccc---chHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHH-c
Confidence 4333 33445556666 99996544 3333321 245678888888876 78999999996 789999988 5
Q ss_pred CccEEEEehhhhhCcc
Q 023070 160 GCEGVLSAESLLENPA 175 (287)
Q Consensus 160 gad~VmiGR~~l~nP~ 175 (287)
|||.+.+|++++..++
T Consensus 194 GAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 194 GANIIVAGTSIFNAED 209 (227)
T ss_dssp TCCEEEESHHHHTCSS
T ss_pred CCCEEEEeHHHhCCCC
Confidence 9999999999997665
No 227
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=97.98 E-value=9.9e-05 Score=68.33 Aligned_cols=133 Identities=6% Similarity=0.088 Sum_probs=103.5
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccC---CcEEEEec
Q 023070 9 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN---VPVSCKIR 84 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~---~pv~vKiR 84 (287)
.|+-..+.+.+|+.+.+.++ .++.||..+.+..|. .+++...+.++++++.++ +.+.+..+
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 45555677788998887666 567899999998652 246666778888887664 77888888
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHH--HHHHHHhcCcc
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMED--VQKCLEETGCE 162 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~d--a~~~l~~~gad 162 (287)
-+|+.++++++++.+++.++.+| ++.- .+.||+.++++++.+++||.+.-.+.+..+ +.++++...+|
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~i-------EqP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d 286 (377)
T 2pge_A 217 GAFSPANAPQRLKRLSQFHLHSI-------EQPI---RQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQ 286 (377)
T ss_dssp TBBCTTTHHHHHHHHHTTCCSEE-------ECCB---CSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCS
T ss_pred CCCCHHHHHHHHHHHhcCCCcEE-------EccC---CcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCC
Confidence 88999999999999999988776 2211 135899999999999999999998988888 77888877899
Q ss_pred EEEE
Q 023070 163 GVLS 166 (287)
Q Consensus 163 ~Vmi 166 (287)
.|++
T Consensus 287 ~i~i 290 (377)
T 2pge_A 287 YIIL 290 (377)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 228
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.96 E-value=4e-05 Score=66.40 Aligned_cols=139 Identities=9% Similarity=0.145 Sum_probs=92.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+-+-+...||+.|.+.+ ++.|+|+|-+|.-.| . .+ +.++++.+++ .+..+.+-+..+.
T Consensus 57 ~~~~dvhLmv~dp~~~i~~~--~~aGAd~itvh~Ea~-----------~--~~---~~~~i~~i~~-~G~k~gv~lnp~t 117 (231)
T 3ctl_A 57 TKPLDCHLMVTRPQDYIAQL--ARAGADFITLHPETI-----------N--GQ---AFRLIDEIRR-HDMKVGLILNPET 117 (231)
T ss_dssp CSCEEEEEESSCGGGTHHHH--HHHTCSEEEECGGGC-----------T--TT---HHHHHHHHHH-TTCEEEEEECTTC
T ss_pred CCcEEEEEEecCHHHHHHHH--HHcCCCEEEECcccC-----------C--cc---HHHHHHHHHH-cCCeEEEEEECCC
Confidence 67999999999999876444 566999999994321 0 12 3456666654 3555555555544
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEecc---CCCCcCCCCccccHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHHHHhc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGR---TRDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEET 159 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~r---t~~~~~~~~~~~~~~~i~~i~~~~-----~ipVi~nGgI~s~~da~~~l~~~ 159 (287)
..+.. +.+.+ ++|.|.+.+. +..|.. .+..++.++++++.. +++|.+.|||+ ++.+.++.+ .
T Consensus 118 p~~~~----~~~l~-~~D~VlvmsV~pGfggQ~f---~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~-a 187 (231)
T 3ctl_A 118 PVEAM----KYYIH-KADKITVMTVDPGFAGQPF---IPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMA-A 187 (231)
T ss_dssp CGGGG----TTTGG-GCSEEEEESSCTTCSSCCC---CTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHH-H
T ss_pred cHHHH----HHHHh-cCCEEEEeeeccCcCCccc---cHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHH-c
Confidence 33322 22222 6999976433 333321 244566677776653 68999999997 588888888 5
Q ss_pred CccEEEEe-hhhhhCcc
Q 023070 160 GCEGVLSA-ESLLENPA 175 (287)
Q Consensus 160 gad~VmiG-R~~l~nP~ 175 (287)
|||.+.+| ++++..++
T Consensus 188 GAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 188 GADVFIVGTSGLFNHAE 204 (231)
T ss_dssp TCCEEEECTTTTGGGCS
T ss_pred CCCEEEEccHHHhCCCC
Confidence 99999999 99887544
No 229
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.93 E-value=4.2e-05 Score=67.26 Aligned_cols=129 Identities=19% Similarity=0.169 Sum_probs=84.7
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccC-CcEEEEecC--C-CChhh-HHHHHHH
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRV--F-PNLQD-TIKYAKM 98 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~-~pv~vKiR~--g-~~~~~-~~~~a~~ 98 (287)
.++...++.|+|.||+-+. +|..+..+.+.+.+-+.++++.++ .+..+|+=+ + .+.++ ....++.
T Consensus 89 ~E~~~Av~~GAdEIDmVin----------ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~i 158 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFP----------YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEI 158 (260)
T ss_dssp HHHHHHHHHTCSEEEEECC----------HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecc----------HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHH
Confidence 3444467789999998752 455555677888888888887763 123445433 1 12234 4577888
Q ss_pred HHHcCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHhh-------CCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 99 LEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNA-------LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 99 l~~~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~~-------~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
..++|+|+|-.+ |-+ ++.+..+.++.+++. .+++|-++|||+|.+++.++++. |.-.
T Consensus 159 a~eaGADfVKTSTGf~-------~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~a--------ga~~ 223 (260)
T 1p1x_A 159 SIKAGADFIKTSTGKV-------AVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI--------ADEL 223 (260)
T ss_dssp HHHTTCSEEECCCSCS-------SCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHH--------HHHH
T ss_pred HHHhCCCEEEeCCCCC-------CCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHh--------hhhh
Confidence 899999999543 222 124566655444443 36999999999999999999984 3345
Q ss_pred hhCccch
Q 023070 171 LENPALF 177 (287)
Q Consensus 171 l~nP~lf 177 (287)
++..|+=
T Consensus 224 lG~~w~~ 230 (260)
T 1p1x_A 224 FGADWAD 230 (260)
T ss_dssp HCTTSCS
T ss_pred ccccccc
Confidence 5555543
No 230
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.92 E-value=0.00035 Score=66.09 Aligned_cols=141 Identities=15% Similarity=0.206 Sum_probs=104.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 8 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
+.|+.-+=|.-++-+..+ ....|+|+|=|+..+ + +.+.+.++++..++ .+..+.+-+..
T Consensus 108 ~lPvLrKDFI~d~~Qi~e---a~~~GAD~ILLi~a~--------------l-~~~~l~~l~~~a~~-lgm~~LvEvh~-- 166 (452)
T 1pii_A 108 PQPILCKDFIIDPYQIYL---ARYYQADACLLMLSV--------------L-DDDQYRQLAAVAHS-LEMGVLTEVSN-- 166 (452)
T ss_dssp CSCEEEESCCCSHHHHHH---HHHTTCSEEEEETTT--------------C-CHHHHHHHHHHHHH-TTCEEEEEECS--
T ss_pred CCCeEEEeccCCHHHHHH---HHHcCCCEEEEEccc--------------C-CHHHHHHHHHHHHH-cCCeEEEEeCC--
Confidence 467777777777765444 345699999998542 1 24567777777665 47777776532
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
.+-++++.++|++.|-+..|.... ...|++...++.+.+ +++||+.|||+|++|+.++.+ . +|+|.
T Consensus 167 -----~eE~~~A~~lga~iIGinnr~L~t-----~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~-~-a~avL 234 (452)
T 1pii_A 167 -----EEEQERAIALGAKVVGINNRDLRD-----LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSH-F-ANGFL 234 (452)
T ss_dssp -----HHHHHHHHHTTCSEEEEESEETTT-----TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTT-T-CSEEE
T ss_pred -----HHHHHHHHHCCCCEEEEeCCCCCC-----CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHH-h-CCEEE
Confidence 223456678999999999886532 257888888887765 689999999999999999987 5 99999
Q ss_pred EehhhhhCccchhchh
Q 023070 166 SAESLLENPALFAGFR 181 (287)
Q Consensus 166 iGR~~l~nP~lf~~~~ 181 (287)
||.+++..++.-..++
T Consensus 235 VGealmr~~d~~~~~~ 250 (452)
T 1pii_A 235 IGSALMAHDDLHAAVR 250 (452)
T ss_dssp ECHHHHTCSCHHHHHH
T ss_pred EcHHHcCCcCHHHHHH
Confidence 9999999888666554
No 231
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.89 E-value=9.1e-05 Score=65.73 Aligned_cols=120 Identities=11% Similarity=0.150 Sum_probs=77.9
Q ss_pred HHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChH---HHHHHHHHHhhccCCcEEEEecCC---CChhh-HHHHH
Q 023070 24 LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLP---LVKSLVEKLALNLNVPVSCKIRVF---PNLQD-TIKYA 96 (287)
Q Consensus 24 ~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~---~~~~iv~~v~~~~~~pv~vKiR~g---~~~~~-~~~~a 96 (287)
.++...++.|+|.||+-+. +|..+..+.+ .+.+-+.++++.++ ...+|+=+- .+.++ ....+
T Consensus 110 ~E~~~Av~~GAdEIDmVin----------ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~ 178 (281)
T 2a4a_A 110 NDTEKALDDGADEIDLVIN----------YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTT 178 (281)
T ss_dssp HHHHHHHHHTCSEEEEECC----------HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecc----------hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHH
Confidence 4444467789999998752 4444445667 88888889988874 234454332 12233 45778
Q ss_pred HHHHHcCCCEEEEe-ccCCCCcCCCCccccHHHHHHHHh---------hCCCcEEEecCCCCHHHHHHHHHh
Q 023070 97 KMLEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKN---------ALRIPVLANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 97 ~~l~~~G~~~I~vh-~rt~~~~~~~~~~~~~~~i~~i~~---------~~~ipVi~nGgI~s~~da~~~l~~ 158 (287)
+...++|+|+|-.. |-+.. .....+...++++.+ ..+++|-++|||+|.+++.++++.
T Consensus 179 ~ia~eaGADfVKTSTGf~~~----gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~a 246 (281)
T 2a4a_A 179 LAVLNGNADFIKTSTGKVQI----NATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILL 246 (281)
T ss_dssp HHHHTTTCSEEECCCSCSSC----CCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHhCCCEEEeCCCCCCC----CCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHH
Confidence 88899999999543 32211 101234444554432 346999999999999999999984
No 232
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=97.89 E-value=0.00018 Score=67.09 Aligned_cols=141 Identities=13% Similarity=0.088 Sum_probs=101.5
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 9 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
.|+...+...+|+.+++.++ .++.||..|.+..|.+.... .-...++.-.+.++++++.+ +..+.+..+-+
T Consensus 155 v~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~ 227 (393)
T 3u9i_A 155 LETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAPTARLILDGNCG 227 (393)
T ss_dssp EECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSC
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCCCCeEEEEccCC
Confidence 34445667788999888776 56789999999987543110 00112455566777787766 56777887889
Q ss_pred CChhhHHHHHHHH--HHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 87 PNLQDTIKYAKML--EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 87 ~~~~~~~~~a~~l--~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
|+..+++++++.+ ++.++.+| ++.- .+.|++.++++++.+++||.+.-.+.+..++.++++...+|.|
T Consensus 228 w~~~~A~~~~~~L~~~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i 297 (393)
T 3u9i_A 228 YTAPDALRLLDMLGVHGIVPALF-------EQPV---AKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVL 297 (393)
T ss_dssp CCHHHHHHHHHTTTTTTCCCSEE-------ECCS---CTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCHHHHHHHHHHHhhCCCCeEEE-------ECCC---CCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEE
Confidence 9999999999999 77777766 2211 1347788899999999999999999999999999998789998
Q ss_pred EE
Q 023070 165 LS 166 (287)
Q Consensus 165 mi 166 (287)
++
T Consensus 298 ~~ 299 (393)
T 3u9i_A 298 NI 299 (393)
T ss_dssp EE
T ss_pred Ee
Confidence 87
No 233
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=97.89 E-value=0.00014 Score=67.71 Aligned_cols=129 Identities=16% Similarity=0.208 Sum_probs=98.5
Q ss_pred CCEEEEec-CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecC
Q 023070 9 RPLFVQFC-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 85 (287)
Q Consensus 9 ~p~~~Qi~-g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~ 85 (287)
.|+-..++ +.+++++.+.++ .++.||..+.+..| | ..+ .+.++++++.+ ++.+.+..+-
T Consensus 150 v~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~~~~~l~vDaN~ 211 (393)
T 1wuf_A 150 IKVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P-------------NKD----IQFVEAVRKSFPKLSLMADANS 211 (393)
T ss_dssp EEBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T-------------TBS----HHHHHHHHTTCTTSEEEEECTT
T ss_pred ceeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h-------------HHH----HHHHHHHHHHcCCCEEEEECCC
Confidence 34444454 346898887766 56679999999764 1 112 35567777766 5677788777
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+|+.+++ ++++.+++.++.+|- +.- .+.|++..+++++.+++||.+.-.+.++.++.++++...+|.|+
T Consensus 212 ~~~~~~a-~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ 280 (393)
T 1wuf_A 212 AYNREDF-LLLKELDQYDLEMIE-------QPF---GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAIN 280 (393)
T ss_dssp CCCGGGH-HHHHTTGGGTCSEEE-------CCS---CSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHH-HHHHHHHhCCCeEEE-------CCC---CCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEE
Confidence 8998888 999999999988874 211 13578889999999999999999999999999999877789998
Q ss_pred E
Q 023070 166 S 166 (287)
Q Consensus 166 i 166 (287)
+
T Consensus 281 i 281 (393)
T 1wuf_A 281 L 281 (393)
T ss_dssp E
T ss_pred e
Confidence 7
No 234
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.86 E-value=8.8e-05 Score=81.33 Aligned_cols=86 Identities=10% Similarity=0.089 Sum_probs=63.3
Q ss_pred hhHHHHHHHHHHcCCCEE---EEeccCCCCcCCCC--ccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH-------
Q 023070 90 QDTIKYAKMLEDAGCSLL---AVHGRTRDEKDGKK--FRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE------- 157 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I---~vh~rt~~~~~~~~--~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~------- 157 (287)
...+..+...+++|+|++ .+.|....+..+.. ...-+..+.++++.++||||+.|||.+.+++..+|.
T Consensus 710 ~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~ 789 (2051)
T 2uv8_G 710 IDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKF 789 (2051)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHcccccccc
Confidence 556677788899999994 44455443321110 012234578899999999999999999999999993
Q ss_pred ---hcCccEEEEehhhhhCcc
Q 023070 158 ---ETGCEGVLSAESLLENPA 175 (287)
Q Consensus 158 ---~~gad~VmiGR~~l~nP~ 175 (287)
..|||||++|+.++.-..
T Consensus 790 g~~~lgadGv~~GTrf~~t~E 810 (2051)
T 2uv8_G 790 DYPPMPFDGFLFGSRVMIAKE 810 (2051)
T ss_dssp TCCCCCCSCEECSGGGTTSTT
T ss_pred CccCCCCceeeechHHHhCcc
Confidence 369999999999987554
No 235
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=97.84 E-value=0.00016 Score=67.30 Aligned_cols=133 Identities=17% Similarity=0.134 Sum_probs=99.8
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 9 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
.|+...+...+|+.+++.++ .++.||..|.+..|.. +++.-.+.++++++.+ +..+.+..+-+
T Consensus 134 v~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~~~~L~vDaN~~ 198 (389)
T 3s5s_A 134 LTTDITITTGSPERAEEAARRAAAMGFRALKVKVGGR---------------LAASDPARIEAIHAAAPGASLILDGNGG 198 (389)
T ss_dssp EECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred eEEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 34445677788999888776 5667999999987521 1233345566666655 56777887789
Q ss_pred CChhhHHHHHHHH--HHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 87 PNLQDTIKYAKML--EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 87 ~~~~~~~~~a~~l--~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
|+..++.++++.+ ++.++.+| ++.- .+.|++.++++++.+++||.+.-.+.+..++.++++...+|.|
T Consensus 199 w~~~~A~~~~~~L~~~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v 268 (389)
T 3s5s_A 199 LTAGEALALVAHARRLGADVALL-------EQPV---PRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVV 268 (389)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEE-------ECCS---CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEE
T ss_pred CCHHHHHHHHHHHhhCCCCeEEE-------ECCC---CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEE
Confidence 9999999999999 54444444 2211 1357899999999999999999999999999999998789999
Q ss_pred EE
Q 023070 165 LS 166 (287)
Q Consensus 165 mi 166 (287)
++
T Consensus 269 ~~ 270 (389)
T 3s5s_A 269 NI 270 (389)
T ss_dssp EE
T ss_pred Ee
Confidence 87
No 236
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.84 E-value=0.00019 Score=61.85 Aligned_cols=149 Identities=13% Similarity=0.223 Sum_probs=95.5
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChh--hhh--cC-------cccccccCChHHHH----------
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQR--IAR--RG-------NYGAFLMDNLPLVK---------- 65 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~--~~~--~~-------~~G~~l~~~~~~~~---------- 65 (287)
+.|++.=|.+.+++++.+.++ +++.|++.|++-+-.|.. ..+ +. ++|. ++ +.+.+.
T Consensus 16 ~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl-~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 16 ELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VL-TAEQVVLAKSSGADFV 93 (224)
T ss_dssp HHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CC-SHHHHHHHHHHTCSEE
T ss_pred HCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-Ee-eHHHHHHHHHCCCCEE
Confidence 357888888999999988888 456789999998654431 111 11 2233 22 333332
Q ss_pred -------HHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-C
Q 023070 66 -------SLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-R 137 (287)
Q Consensus 66 -------~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ 137 (287)
++++..++ .+.++.+-+ .+..+ +..+.+.|+|+|-+++ .. . ..-.++++.++..+ +
T Consensus 94 ~~p~~d~~v~~~ar~-~g~~~i~Gv------~t~~e-~~~A~~~Gad~vk~Fp---a~---~--~gG~~~lk~l~~~~~~ 157 (224)
T 1vhc_A 94 VTPGLNPKIVKLCQD-LNFPITPGV------NNPMA-IEIALEMGISAVKFFP---AE---A--SGGVKMIKALLGPYAQ 157 (224)
T ss_dssp ECSSCCHHHHHHHHH-TTCCEECEE------CSHHH-HHHHHHTTCCEEEETT---TT---T--TTHHHHHHHHHTTTTT
T ss_pred EECCCCHHHHHHHHH-hCCCEEecc------CCHHH-HHHHHHCCCCEEEEee---Cc---c--ccCHHHHHHHHhhCCC
Confidence 22333332 344443321 11222 4556689999999864 11 0 01257889999887 7
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 138 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 138 ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
+||++.||| +++.+.++++..|+++|. |+++...+.+
T Consensus 158 ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~~~~i 194 (224)
T 1vhc_A 158 LQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVEKKLI 194 (224)
T ss_dssp CEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCHHHH
T ss_pred CeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcCcchh
Confidence 999999999 568999999855999999 9888766554
No 237
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.76 E-value=9.9e-05 Score=65.50 Aligned_cols=119 Identities=15% Similarity=0.140 Sum_probs=77.7
Q ss_pred HHHHHHHHcCCCCEEEEeccCChhhhhcCccccccc---CChHHHHHHHHHHhhccCCcEEEEecC--C-CChhh-HHHH
Q 023070 23 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLM---DNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQD-TIKY 95 (287)
Q Consensus 23 ~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~---~~~~~~~~iv~~v~~~~~~pv~vKiR~--g-~~~~~-~~~~ 95 (287)
..++...++.|+|.||+=+ ++|..+. .+.+.+.+-++++++.++ +..+|+=+ + .+.++ ....
T Consensus 103 ~~Ea~~Av~~GAdEIDmVi----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A 171 (297)
T 4eiv_A 103 SLEAVGALKDGADEIECLI----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRA 171 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeee----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHH
Confidence 3345557788999999753 1455444 578888888888888874 34555533 3 22233 5677
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh------------------------CCCcEEEe-cCCCCHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA------------------------LRIPVLAN-GNVRHME 150 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~------------------------~~ipVi~n-GgI~s~~ 150 (287)
++.+.++|+|+|--+.... ++.+..+.++.+++. .++.|=++ |||+|.+
T Consensus 172 ~~ia~~AGADFVKTSTGf~------~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e 245 (297)
T 4eiv_A 172 AVAALEGGADFLQTSSGLG------ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAE 245 (297)
T ss_dssp HHHHHHHTCSEEECCCSSS------SCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHH
T ss_pred HHHHHHhCCCEEEcCCCCC------CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHH
Confidence 8888999999994432211 112444443333322 34778899 9999999
Q ss_pred HHHHHHHh
Q 023070 151 DVQKCLEE 158 (287)
Q Consensus 151 da~~~l~~ 158 (287)
++.++++.
T Consensus 246 ~A~~~i~~ 253 (297)
T 4eiv_A 246 TADFLMQM 253 (297)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999984
No 238
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=97.75 E-value=0.00063 Score=62.58 Aligned_cols=131 Identities=14% Similarity=0.144 Sum_probs=100.7
Q ss_pred EEEEec-CCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCC
Q 023070 11 LFVQFC-ANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 86 (287)
Q Consensus 11 ~~~Qi~-g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g 86 (287)
+..-+. +..++.+.++++.+. .|+..+.+..|- .+++.-.+.++++++.+ ++.+.+...-+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~~ 198 (370)
T 2chr_A 134 IAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQA 198 (370)
T ss_dssp BEEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSS---------------SCHHHHHHHHHHHHHHTTTTSEEEEECTTC
T ss_pred eeeeeccCchhhhHHHHHHHHhhcccceeeccccc---------------CChHHHHHHHHHHHHhcCCCcEEEecCCCC
Confidence 333343 456677777777654 589999887652 23445556677888776 57788888889
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.+++.++++.+++.++.+| ++.- .+.|++.++++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 199 ~~~~~A~~~~~~l~~~~~~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~ 268 (370)
T 2chr_A 199 WDEQVASVYIPELEALGVELI-------EQPV---GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSL 268 (370)
T ss_dssp CCTHHHHHHHHHHHTTTCCEE-------ECCS---CSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhcCCcee-------cCCC---ChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEe
Confidence 999999999999999998876 2211 135789999999999999999999999999999998777888865
No 239
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.74 E-value=0.00011 Score=63.79 Aligned_cols=133 Identities=12% Similarity=0.073 Sum_probs=87.1
Q ss_pred EEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--------CCcEEEEe
Q 023070 12 FVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--------NVPVSCKI 83 (287)
Q Consensus 12 ~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--------~~pv~vKi 83 (287)
=+-+.-++|+.+.+.+ ++.|+|+|-+|.... +.+.+.++.+++.. +.-+.+-+
T Consensus 73 DvhLMv~~p~~~i~~~--~~aGAd~itvH~ea~-----------------~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l 133 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAV--VANGANLVTLQLEQY-----------------HDFALTIEWLAKQKTTYANQVYPVLIGACL 133 (237)
T ss_dssp EEEEECSCHHHHHHHH--HHTTCSEEEEETTCT-----------------TSHHHHHHHHTTCEEEETTEEEECEEEEEE
T ss_pred CeEEEEECHHHHHHHH--HHcCCCEEEEecCCc-----------------ccHHHHHHHHHhcccccccccCCceEEEEE
Confidence 5677778998887766 467999999995421 11456667766541 33444444
Q ss_pred cCCCChhhHHHHHHHHHHcCCCEEEE---eccCCCCcCCCCccccHHHHHHHHhhC-----CCcEEEecCCCCHHHHHHH
Q 023070 84 RVFPNLQDTIKYAKMLEDAGCSLLAV---HGRTRDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 84 R~g~~~~~~~~~a~~l~~~G~~~I~v---h~rt~~~~~~~~~~~~~~~i~~i~~~~-----~ipVi~nGgI~s~~da~~~ 155 (287)
......+. ++.+. .++|+|.+ ++.+..|.. .+..++.++++++.. ++||.+-|||+ .+.+.++
T Consensus 134 ~p~Tp~~~----l~~~l-~~~D~vlvMsv~pgfggq~f---~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~ 204 (237)
T 3cu2_A 134 CPETPISE----LEPYL-DQIDVIQLLTLDPRNGTKYP---SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYF 204 (237)
T ss_dssp CTTSCGGG----GTTTT-TTCSEEEEESEETTTTEECC---HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHH
T ss_pred eCCChHHH----HHHHh-hcCceeeeeeeccCcCCeec---ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHH
Confidence 33333222 22222 36999855 666554322 234466677777664 58999999996 7888888
Q ss_pred HH--hcCccEEEEehhhhhC
Q 023070 156 LE--ETGCEGVLSAESLLEN 173 (287)
Q Consensus 156 l~--~~gad~VmiGR~~l~n 173 (287)
.+ . |||++.+|++++..
T Consensus 205 ~~~~a-Gad~~VvGSaIf~~ 223 (237)
T 3cu2_A 205 KQGTH-QIDWLVSGSALFSG 223 (237)
T ss_dssp HHSSS-CCCCEEECGGGGSS
T ss_pred HHhCC-CCcEEEEeeHHhCC
Confidence 76 5 99999999999874
No 240
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.74 E-value=0.00057 Score=61.48 Aligned_cols=125 Identities=18% Similarity=0.197 Sum_probs=79.2
Q ss_pred HHcCCCCEEEEe--ccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC-----CC--Ch-hhHHHHHHH
Q 023070 29 RVEPYCDYVDIN--LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV-----FP--NL-QDTIKYAKM 98 (287)
Q Consensus 29 ~~~~g~d~IdiN--~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~-----g~--~~-~~~~~~a~~ 98 (287)
.++.|+|+|.+. ++...+ . ....+.+.++.+..+ ..++|+.+-+-. +. +. +...+.++.
T Consensus 117 a~~~GAdaV~vlv~~~~d~~---------~-~~~~~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~ 185 (304)
T 1to3_A 117 VKRDGAKALKLLVLWRSDED---------A-QQRLNMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKE 185 (304)
T ss_dssp HHHTTCCEEEEEEEECTTSC---------H-HHHHHHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEEEcCCCcc---------H-HHHHHHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHHHHHH
Confidence 456699998854 331100 0 111233444444433 348888776532 21 12 334555888
Q ss_pred HHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh----CCCc-EEEecCCCCHH----HHHHHHHhcCccEEEEehh
Q 023070 99 LEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA----LRIP-VLANGNVRHME----DVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 99 l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~----~~ip-Vi~nGgI~s~~----da~~~l~~~gad~VmiGR~ 169 (287)
+.+.|+|++-++.-.. . ..+++.+.++.+. +++| |++.||+ +.+ .+..+++ .|++||.+||+
T Consensus 186 a~~lGaD~iKv~~~~~-~------~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~-aGa~Gv~vGRa 256 (304)
T 1to3_A 186 LGDSGADLYKVEMPLY-G------KGARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAME-AGASGFLAGRA 256 (304)
T ss_dssp HTTSSCSEEEECCGGG-G------CSCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHH-TTCCEEEESHH
T ss_pred HHHcCCCEEEeCCCcC-C------CCCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHH-cCCeEEEEehH
Confidence 8999999999985322 1 1256777776666 8999 9999999 553 3666666 59999999999
Q ss_pred hhhC
Q 023070 170 LLEN 173 (287)
Q Consensus 170 ~l~n 173 (287)
+...
T Consensus 257 I~q~ 260 (304)
T 1to3_A 257 VWSS 260 (304)
T ss_dssp HHGG
T ss_pred HhCc
Confidence 9876
No 241
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=97.73 E-value=0.00051 Score=63.41 Aligned_cols=113 Identities=11% Similarity=0.099 Sum_probs=91.4
Q ss_pred HHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCC
Q 023070 28 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCS 105 (287)
Q Consensus 28 ~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~ 105 (287)
+....||..+.+..|- +++.-.+.++++++.+ ++.+.+...-+|+..+++++++.+++.++.
T Consensus 154 ~~~~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~ 217 (378)
T 4hpn_A 154 ERRAEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFGID 217 (378)
T ss_dssp HHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred HHHHhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhcccc
Confidence 3556799999988652 3455567788888876 578888888899999999999999999987
Q ss_pred EEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 106 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 106 ~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+| ++.- .+.|++.++++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 218 ~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 268 (378)
T 4hpn_A 218 WF-------EEPV---VPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQP 268 (378)
T ss_dssp CE-------ECCS---CTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred hh-------hcCC---CccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEee
Confidence 76 2211 135789999999999999999999999999999999878888865
No 242
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.72 E-value=5.7e-05 Score=64.22 Aligned_cols=76 Identities=11% Similarity=0.056 Sum_probs=56.2
Q ss_pred HHHHHHcCCCEEEEeccCCCCc-CCCCccccHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhh
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEK-DGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~-~~~~~~~~~~~i~~i~~~--~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+..+. .|+|+|.+.+-..... .+...+.+|+.++.+++. .++||++.|||. ++++.++++ .|++||.++++++.
T Consensus 101 ~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~-~Ga~gVav~s~i~~ 177 (210)
T 3ceu_A 101 VKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKD-FGFGGAVVLGDLWN 177 (210)
T ss_dssp HHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHH-TTCSEEEESHHHHT
T ss_pred HHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHH-hCCCEEEEhHHhHc
Confidence 44455 8999998865432221 111124688999999887 689999999997 899999998 79999999999986
Q ss_pred Cc
Q 023070 173 NP 174 (287)
Q Consensus 173 nP 174 (287)
.+
T Consensus 178 ~~ 179 (210)
T 3ceu_A 178 KF 179 (210)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 243
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=97.71 E-value=0.00048 Score=64.53 Aligned_cols=126 Identities=12% Similarity=0.085 Sum_probs=96.1
Q ss_pred ecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhh
Q 023070 15 FCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQD 91 (287)
Q Consensus 15 i~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~ 91 (287)
+...+++.+++.++ ..+.||..+.+..|.. ++...+.++++++.+ ++.+.+...-+|+..+
T Consensus 184 ~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~ 247 (412)
T 4h1z_A 184 LPEDTRAKRAELAAAWQAKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAHTASE 247 (412)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCCCHHH
T ss_pred CCCCcHHHHHHHHHHHHhcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCCCHHH
Confidence 33457888888776 5667999999875421 122344466777765 5778888888999999
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++++++.+++.|+.+| ++.-. +.|++.++++++.+++||.+.-.+.+..++.++++...+|.+++
T Consensus 248 A~~~~~~l~~~~l~~i-------EqP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~ 312 (412)
T 4h1z_A 248 AVALIKAMEPHGLWFA-------EAPVR---TEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQP 312 (412)
T ss_dssp HHHHHHHHGGGCEEEE-------ECCSC---TTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHhhccccccee-------cCCCC---ccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEe
Confidence 9999999999997665 22111 35789999999999999999999999999999999777787654
No 244
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.63 E-value=0.0013 Score=58.99 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=94.1
Q ss_pred CCCEEEEecC--CCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 023070 8 DRPLFVQFCA--NDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g--~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR 84 (287)
+.|+++-+=. .+++...+.++. .+.|+++|.|--+...+ +.++.++.-+-..+...+-|++++++ +.++.|--|
T Consensus 89 ~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k--rcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~AR 165 (305)
T 3ih1_A 89 DLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPK--KCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVAR 165 (305)
T ss_dssp CCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSC--CTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCc--ccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 3577655421 358888888874 56799999998553211 11222332333455555555665555 555544444
Q ss_pred CC----CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe---cC---CCCHHHHHH
Q 023070 85 VF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---GN---VRHMEDVQK 154 (287)
Q Consensus 85 ~g----~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n---Gg---I~s~~da~~ 154 (287)
.. ...+++++=++.++++|+|.|.+++. .+.+.++++.+.+++|+++| || ..+.+ +
T Consensus 166 tda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~-----------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~---e 231 (305)
T 3ih1_A 166 TDARGVEGLDEAIERANAYVKAGADAIFPEAL-----------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAE---E 231 (305)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC-----------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHH---H
T ss_pred eccccccCHHHHHHHHHHHHHcCCCEEEEcCC-----------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHH---H
Confidence 42 23568888899999999999999864 24577899999999999876 33 33433 3
Q ss_pred HHHhcCccEEEEehhhh
Q 023070 155 CLEETGCEGVLSAESLL 171 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l 171 (287)
+- +.|+..|.+|-.++
T Consensus 232 L~-~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 232 FA-NMGFQMVIYPVTSL 247 (305)
T ss_dssp HH-HTTCSEEEECSHHH
T ss_pred HH-HcCCCEEEEchHHH
Confidence 33 46999999986654
No 245
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.63 E-value=0.00016 Score=61.79 Aligned_cols=134 Identities=15% Similarity=0.161 Sum_probs=78.9
Q ss_pred EEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC-Chhh
Q 023070 13 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQD 91 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-~~~~ 91 (287)
+-+. ..|+.+.+. .++.|+|+|-++... ..+.+.++++.+++. +..+.+.+ ++. +.
T Consensus 66 ~~l~-d~p~~~~~~--~~~aGad~i~vh~~~----------------~~~~~~~~~~~~~~~-g~~~~~d~-l~~~T~-- 122 (218)
T 3jr2_A 66 MKTT-DGGAILSRM--AFEAGADWITVSAAA----------------HIATIAACKKVADEL-NGEIQIEI-YGNWTM-- 122 (218)
T ss_dssp EEEC-SCHHHHHHH--HHHHTCSEEEEETTS----------------CHHHHHHHHHHHHHH-TCEEEEEC-CSSCCH--
T ss_pred Eeec-ccHHHHHHH--HHhcCCCEEEEecCC----------------CHHHHHHHHHHHHHh-CCccceee-eecCCH--
Confidence 3444 456654433 345688999888431 123456666666543 55444422 222 22
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCC-CccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGK-KFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~-~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
+-++.+.+.|++++.++.....+..+. ..+..++.+++++. .++||++.||| +++.+.++++ .|||+|.+||++
T Consensus 123 --~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~-~~~pi~v~GGI-~~~~~~~~~~-aGAd~vvvGsaI 197 (218)
T 3jr2_A 123 --QDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSA-LGIELSITGGI-VPEDIYLFEG-IKTKTFIAGRAL 197 (218)
T ss_dssp --HHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHH-TTCEEEEESSC-CGGGGGGGTT-SCEEEEEESGGG
T ss_pred --HHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhC-CCCCEEEECCC-CHHHHHHHHH-cCCCEEEEchhh
Confidence 224445667999987742211111011 01233444555543 58999999999 5899988887 699999999998
Q ss_pred hhCc
Q 023070 171 LENP 174 (287)
Q Consensus 171 l~nP 174 (287)
...+
T Consensus 198 ~~a~ 201 (218)
T 3jr2_A 198 AGAE 201 (218)
T ss_dssp SHHH
T ss_pred cCCC
Confidence 7543
No 246
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=97.63 E-value=0.0012 Score=59.93 Aligned_cols=124 Identities=8% Similarity=0.060 Sum_probs=95.7
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
.+++.+.+.++ .++.||..+.|..|. .+++.-.+.++++++.+ ++.+.+...-+|+.+++++
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~ 179 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANR 179 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHH
Confidence 46777766555 667899999998652 23555567788888876 4778888788899999999
Q ss_pred HHHHHHHc---CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 95 YAKMLEDA---GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 95 ~a~~l~~~---G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+++.+++. ++.+| ++.- .+.|++.++++++.+++||.+.=.+.+..++.++++...+|.+.+
T Consensus 180 ~~~~l~~~~~~~i~~i-------EqP~---~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~i 244 (332)
T 2ozt_A 180 WFAWLDRHGNGKIEYV-------EQPL---PPDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVI 244 (332)
T ss_dssp HHHHHHHHCCTTEEEE-------ECCS---CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHhhccCCccee-------ECCC---CCCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 99999998 65544 2211 135789999999999999999999999999999998756777666
No 247
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=97.63 E-value=0.0012 Score=61.31 Aligned_cols=131 Identities=12% Similarity=0.215 Sum_probs=99.7
Q ss_pred CCCEEEEecCCC-HHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 023070 8 DRPLFVQFCAND-PEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIR 84 (287)
Q Consensus 8 ~~p~~~Qi~g~~-~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR 84 (287)
..|+-..++..+ |+.+.+.++ .++.||..+.+..| | ..+. +.++++++.+ ++.+.+..+
T Consensus 137 ~v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~-------------~~d~----~~v~avR~~~~~~~l~vDaN 198 (388)
T 3qld_A 137 RVEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P-------------GRDR----AAIKAVRLRYPDLAIAADAN 198 (388)
T ss_dssp EEEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T-------------TBSH----HHHHHHHHHCTTSEEEEECT
T ss_pred eEEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c-------------HHHH----HHHHHHHHHCCCCeEEEECC
Confidence 345666666665 999988776 56789999999875 1 1233 4556666654 577888888
Q ss_pred CCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 85 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
-+|+..++.. ++.+++.++.+| ++.- .+.|++..+++++.+++||.+.=.+.+..++.++++...+|.|
T Consensus 199 ~~~~~~~A~~-~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v 267 (388)
T 3qld_A 199 GSYRPEDAPV-LRQLDAYDLQFI-------EQPL---PEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVL 267 (388)
T ss_dssp TCCCGGGHHH-HHHGGGGCCSCE-------ECCS---CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCChHHHHH-HHHHhhCCCcEE-------ECCC---CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 8999888876 788998887766 2211 1357888999999999999999899999999999997779999
Q ss_pred EEe
Q 023070 165 LSA 167 (287)
Q Consensus 165 miG 167 (287)
++-
T Consensus 268 ~~k 270 (388)
T 3qld_A 268 NVK 270 (388)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 248
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=97.62 E-value=0.00051 Score=65.02 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=98.2
Q ss_pred CCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 94 (287)
.+|+++++.|+ .+++ ||..+.|..|-. +++.-.+.++++++.+ ++++.+..+-+|+..++++
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKW 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHHH
Confidence 68999988877 4554 999999986521 3444456777887776 6788888888999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+++.+++. +.+| ++. ..+++.++++++.+++||.+.-.+.+..++.++++...+|.|++-
T Consensus 255 ~~~~L~~~-l~~i-------EeP-----~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d 314 (445)
T 3va8_A 255 VAKELEGI-VEYL-------EDP-----AGEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSD 314 (445)
T ss_dssp HHHHTTTT-CSEE-------ESC-----BSHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEEC
T ss_pred HHHHHhhh-cCeE-------eec-----CcCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEec
Confidence 99999987 7666 221 137888999999999999998899999999999998789998874
No 249
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.62 E-value=0.00054 Score=58.30 Aligned_cols=135 Identities=16% Similarity=0.205 Sum_probs=84.9
Q ss_pred EEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhH
Q 023070 13 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDT 92 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~ 92 (287)
+-+. ..|+.+.+ ..++.|+|.|.+|... ..+.+.++++.+++ .+.++.+++-.+.+ ..
T Consensus 63 ~kl~-dip~t~~~--~~~~~Gad~itvh~~~----------------g~~~l~~~~~~~~~-~g~~~~~~ll~~~t-~~- 120 (216)
T 1q6o_A 63 AKIA-DAGKILSR--MCFEANADWVTVICCA----------------DINTAKGALDVAKE-FNGDVQIELTGYWT-WE- 120 (216)
T ss_dssp EEEC-SCHHHHHH--HHHHTTCSEEEEETTS----------------CHHHHHHHHHHHHH-TTCEEEEEECSCCC-HH-
T ss_pred EEec-ccHHHHHH--HHHhCCCCEEEEeccC----------------CHHHHHHHHHHHHH-cCCCceeeeeeCCC-hh-
Confidence 5554 46777766 3456799999999531 12335566666655 36777666531333 21
Q ss_pred HHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 93 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 93 ~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
-++.+++.|.+.+.+|--......+..+ ..+.++.+++.. ++||++.|||+ ++.+.++++ .|+|++.+||++
T Consensus 121 --~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~-aGad~ivvG~~I 194 (216)
T 1q6o_A 121 --QAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKG-IPIHVFIAGRSI 194 (216)
T ss_dssp --HHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTT-SCCSEEEESHHH
T ss_pred --hHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHH-cCCCEEEEeehh
Confidence 2344556688777776321111112222 245566666654 68899999998 788888887 699999999999
Q ss_pred hhCcc
Q 023070 171 LENPA 175 (287)
Q Consensus 171 l~nP~ 175 (287)
+..++
T Consensus 195 ~~a~d 199 (216)
T 1q6o_A 195 RDAAS 199 (216)
T ss_dssp HTSSC
T ss_pred cCCCC
Confidence 87544
No 250
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=97.62 E-value=0.00066 Score=64.24 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=99.8
Q ss_pred CCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 94 (287)
.+|+++++.|+ .++. ||..+.|..|-. +++.-.+.++++|+.+ ++++.+..+-+|+..+++.
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~~~~Ai~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWTPQTSVK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHH
Confidence 68999998877 4554 999999986521 3444456777887776 6788999888999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhh
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l 171 (287)
+++.+++. +.+| ++. . .+++.++++++.+++||.+.-.+.++.++.++++...+|.+++-=.-.
T Consensus 257 ~~~~L~~~-l~~i-------EeP----~-~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~ 320 (445)
T 3vdg_A 257 VAAGLEGV-LEYL-------EDP----T-PGLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYW 320 (445)
T ss_dssp HHHHTTTT-CSEE-------ECC----S-SSHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHhhH-HHee-------eCC----C-CCHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCccee
Confidence 99999987 7666 221 1 378889999999999999988999999999999988899998743333
No 251
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=97.61 E-value=0.00065 Score=63.01 Aligned_cols=128 Identities=17% Similarity=0.250 Sum_probs=96.2
Q ss_pred CEEEEec-CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC
Q 023070 10 PLFVQFC-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~-g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g 86 (287)
|+-..++ +.+++++.+.++ .++.||..+.+..| | ..+. +.++++++.+ ++.+.+..+-+
T Consensus 151 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d~----~~v~avr~a~~~~~l~vDaN~~ 212 (386)
T 1wue_A 151 PVGISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIR-P-------------GYDV----EPVALIRQHFPNLPLMVDANSA 212 (386)
T ss_dssp ECCEEECCCSCHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSH----HHHHHHHHHCTTSCEEEECTTC
T ss_pred EeeEEecCCCCHHHHHHHHHHHHHhhhheEEEeeC-c-------------HHHH----HHHHHHHHhCCCCeEEEeCCCC
Confidence 4434443 346888887665 56789999999765 2 1233 4456666554 57788888888
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.+++ ++++.+++.++.+|- +.- .+.||+..+++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 213 ~~~~~a-~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 281 (386)
T 1wue_A 213 YTLADL-PQLQRLDHYQLAMIE-------QPF---AADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINL 281 (386)
T ss_dssp CCGGGH-HHHHGGGGSCCSCEE-------CCS---CTTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHH-HHHHHHHhCCCeEEe-------CCC---CcccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 998888 889999998887762 211 135788899999999999999989999999999998877999987
No 252
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.60 E-value=0.00028 Score=60.30 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=96.1
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChh--hhh--cC-------cccccccCChHHHHHHHHHH----
Q 023070 8 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQR--IAR--RG-------NYGAFLMDNLPLVKSLVEKL---- 71 (287)
Q Consensus 8 ~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~--~~~--~~-------~~G~~l~~~~~~~~~iv~~v---- 71 (287)
+.|++.=|-+.+++++.+.++ +++.|++.|++-+-.|.. ..+ +. ++|. ++ +.+.+...++.=
T Consensus 15 ~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-vi-~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 15 TGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-VL-NPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-CC-SHHHHHHHHHHTCSCE
T ss_pred HCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-EE-EHHHHHHHHHcCCCEE
Confidence 578999999999999988888 456789999998654431 111 11 2333 22 223333222211
Q ss_pred ------------hhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CC
Q 023070 72 ------------ALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 138 (287)
Q Consensus 72 ------------~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~i 138 (287)
++..++++..-+ .+..+ +....+.|+|+|.+++- . . ....++++.++..+ ++
T Consensus 93 ~~p~~d~~v~~~~~~~g~~~i~G~------~t~~e-~~~A~~~Gad~v~~Fpa---~---~--~gG~~~lk~i~~~~~~i 157 (214)
T 1wbh_A 93 ISPGLTEPLLKAATEGTIPLIPGI------STVSE-LMLGMDYGLKEFKFFPA---E---A--NGGVKALQAIAGPFSQV 157 (214)
T ss_dssp EESSCCHHHHHHHHHSSSCEEEEE------SSHHH-HHHHHHTTCCEEEETTT---T---T--TTHHHHHHHHHTTCTTC
T ss_pred EcCCCCHHHHHHHHHhCCCEEEec------CCHHH-HHHHHHCCCCEEEEecC---c---c--ccCHHHHHHHhhhCCCC
Confidence 111234443321 11222 45566899999988651 1 0 01257889999887 89
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
||++.|||+ ++.+.++++..|+++|. |+++...+.+
T Consensus 158 pvvaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 158 RFCPTGGIS-PANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp EEEEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred eEEEECCCC-HHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 999999994 69999999855999999 9888766654
No 253
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.57 E-value=0.00014 Score=82.59 Aligned_cols=78 Identities=9% Similarity=0.152 Sum_probs=56.8
Q ss_pred HHHHHHHcCCC------EEEEeccCCCCcCCCCccccHHHH----HHHHhhCCCcEEEecCCCCHHHHHHHH--------
Q 023070 95 YAKMLEDAGCS------LLAVHGRTRDEKDGKKFRADWNAI----KAVKNALRIPVLANGNVRHMEDVQKCL-------- 156 (287)
Q Consensus 95 ~a~~l~~~G~~------~I~vh~rt~~~~~~~~~~~~~~~i----~~i~~~~~ipVi~nGgI~s~~da~~~l-------- 156 (287)
.++++.+.|++ .|++.|.+..+..+. ..-...+ .++++.+++||++.|||.|++++..++
T Consensus 556 ~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~--~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~ 633 (3089)
T 3zen_D 556 QIRSVIRIAAEVPTKPVIVHIEGGRAGGHHSW--EDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVH 633 (3089)
T ss_dssp HHHHHHHHHTTSTTSCEEEEECCSSSSEECCS--CCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTT
T ss_pred HHHHHHHhhhhcCCCcEEEEEeCCCcCCCCCc--ccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhcccccccc
Confidence 34455566666 777777665443221 1112344 777777899999999999999999999
Q ss_pred ---HhcCccEEEEehhhhhCcc
Q 023070 157 ---EETGCEGVLSAESLLENPA 175 (287)
Q Consensus 157 ---~~~gad~VmiGR~~l~nP~ 175 (287)
. .|||||++|+.++.-+.
T Consensus 634 ~~p~-lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 634 GYPL-MPIDGILVGTAAMATLE 654 (3089)
T ss_dssp TCCC-CCCSEEECSSTTTTCTT
T ss_pred CccC-CCCCEEEecHHHHhCcc
Confidence 5 59999999999987654
No 254
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=97.54 E-value=0.00092 Score=63.19 Aligned_cols=122 Identities=14% Similarity=0.181 Sum_probs=97.8
Q ss_pred CCHHHHHHHHH-HHcC-CCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~-g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 94 (287)
.+|+++++.|+ .++. ||..+.|..|.. +++.-.+.++++|+.+ ++.+.+..+-+|+..++++
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETSIR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHHHH
Confidence 68999998887 4554 999999986521 3444456677787776 6788899888999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+++.+++. +.+| ++. ..+++.++++++.+++||.+.-.+.+..++.++++...+|.+++-
T Consensus 252 ~~~~L~~~-l~~i-------EeP-----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d 311 (441)
T 3vc5_A 252 VGRALDGV-LEYL-------EDP-----TPGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLID 311 (441)
T ss_dssp HHHHTTTT-CSEE-------ECC-----SSSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHH-HHHh-------hcc-----CCCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeec
Confidence 99999987 7666 221 137888999999999999998889999999999998889998874
No 255
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.53 E-value=0.00033 Score=58.67 Aligned_cols=68 Identities=18% Similarity=0.270 Sum_probs=53.2
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
.-.+.+.+...|++-+-+. .. -+.++++++.+++|||+.|+|+|.+|+.++++ .||++|..+...+.+
T Consensus 118 ~~~~~i~~~~PD~iEiLPG----------i~-p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~-aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 118 KGVALIQKVQPDCIELLPG----------II-PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIA-SGAIAVTTSNKHLWE 185 (192)
T ss_dssp HHHHHHHHHCCSEEEEECT----------TC-HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHT-TTEEEEEECCGGGGT
T ss_pred HHHHHHhhcCCCEEEECCc----------hh-HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHH-cCCeEEEeCCHHHhC
Confidence 3455566666777755422 22 26899999999999999999999999999999 599999999776654
No 256
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=97.50 E-value=0.00061 Score=63.26 Aligned_cols=126 Identities=9% Similarity=0.029 Sum_probs=96.5
Q ss_pred CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 17 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
+.+++.+++.++ ..+.||..+.+..|- .+++.-.+.++++++.+ ++.+.+...-+|+..+++
T Consensus 162 ~~~~~~~~~~~~~~~~~G~~~~Kikvg~---------------~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~ 226 (388)
T 4h83_A 162 GEPLGSIADEMHNYQELGLAGVKFKVGG---------------LSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAV 226 (388)
T ss_dssp TCTTCSHHHHHHHHHHHTBSEEEEECSS---------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCceEeecCCC---------------CCHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHH
Confidence 345577777666 556799999998641 13344456677787776 578888888899999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++++.+++.++.+| ++. .+...+++.++++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 227 ~~~~~l~~~~~~~i-------EeP--~~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 227 DLSRRIADLNIRWF-------EEP--VEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNF 290 (388)
T ss_dssp HHHHHTTTSCCCCE-------ESC--BCSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECC
T ss_pred HHHHHhhhcCccee-------ecC--cccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEee
Confidence 99999999998776 221 11123578889999999999999999999999999999877888765
No 257
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=97.41 E-value=0.0024 Score=58.97 Aligned_cols=132 Identities=8% Similarity=0.146 Sum_probs=99.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEEEE
Q 023070 7 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCK 82 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~vK 82 (287)
+..|+-..++..+++++.+.++ .++.||..+.+..|.. +++.-.+.++++++++ ++.+.+.
T Consensus 138 ~~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vD 202 (376)
T 4h2h_A 138 DSVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAAD 202 (376)
T ss_dssp SEEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEe
Confidence 3456777888899999888776 5667999999987621 2233345566666543 5778888
Q ss_pred ecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 83 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 83 iR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
.+-+|+..+++.+++.+++.+. ++ ++. -.+++.++.+++.+++||.+.-.+.+..++.++++...+|
T Consensus 203 aN~~~~~~~A~~~~~~l~~~~~-~i-------EeP-----~~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d 269 (376)
T 4h2h_A 203 GNRGWTTRDALRFSRECPDIPF-VM-------EQP-----CNSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVD 269 (376)
T ss_dssp CTTCCCHHHHHHHHHHCTTSCE-EE-------ESC-----SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred eccCCCHHHHHHHHHHHhhccc-cc-------cCC-----cchhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccC
Confidence 8889999999999999887764 22 221 1357778899999999999988999999999999977788
Q ss_pred EEEE
Q 023070 163 GVLS 166 (287)
Q Consensus 163 ~Vmi 166 (287)
.|++
T Consensus 270 ~v~~ 273 (376)
T 4h2h_A 270 GFGM 273 (376)
T ss_dssp EECC
T ss_pred cccc
Confidence 8865
No 258
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.38 E-value=0.0015 Score=59.39 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=70.2
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcC--CCEEEEeccCCCCcCCCCccccHHHHHHHHhhC
Q 023070 59 DNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAG--CSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL 136 (287)
Q Consensus 59 ~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G--~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~ 136 (287)
.+++...++++.+++ .+.|+++.+ +.+ .+..+.++.+.+.| ++.+.++... + .....|+.++.+++.+
T Consensus 78 ~~~~~~~~~i~~~~~-~g~~v~v~~--g~~-~~~~~~a~~~~~~g~~~~~i~i~~~~-----G-~~~~~~~~i~~lr~~~ 147 (336)
T 1ypf_A 78 FQPEKRISFIRDMQS-RGLIASISV--GVK-EDEYEFVQQLAAEHLTPEYITIDIAH-----G-HSNAVINMIQHIKKHL 147 (336)
T ss_dssp SSGGGHHHHHHHHHH-TTCCCEEEE--CCS-HHHHHHHHHHHHTTCCCSEEEEECSS-----C-CSHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHh-cCCeEEEeC--CCC-HHHHHHHHHHHhcCCCCCEEEEECCC-----C-CcHHHHHHHHHHHHhC
Confidence 344556666776654 356888774 444 34456788899999 9999886421 1 1135689999999998
Q ss_pred CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 137 RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 137 ~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+.|++..|+|.++++++.+.+ .|||+|.++
T Consensus 148 ~~~~vi~G~v~s~e~A~~a~~-aGad~Ivvs 177 (336)
T 1ypf_A 148 PESFVIAGNVGTPEAVRELEN-AGADATKVG 177 (336)
T ss_dssp TTSEEEEEEECSHHHHHHHHH-HTCSEEEEC
T ss_pred CCCEEEECCcCCHHHHHHHHH-cCCCEEEEe
Confidence 655555677999999999988 599999993
No 259
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.38 E-value=0.0012 Score=60.74 Aligned_cols=95 Identities=24% Similarity=0.352 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCc
Q 023070 60 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 139 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ip 139 (287)
.++...+.++.+++....|+.+-+.... .+.++.+.++|++.|+++.-. +.+ ...++.++++++..++|
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~~-----~e~a~~l~eaGad~I~ld~a~-----G~~-~~~~~~i~~i~~~~~~~ 147 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVNE-----IERAKLLVEAGVDVIVLDSAH-----GHS-LNIIRTLKEIKSKMNID 147 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTTC-----HHHHHHHHHTTCSEEEECCSC-----CSB-HHHHHHHHHHHHHCCCE
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCCH-----HHHHHHHHHcCcCeEEEeCCC-----CCc-HHHHHHHHHHHHhcCCc
Confidence 5677788888888777788888874422 677888999999999886221 110 12346788888888999
Q ss_pred EEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 140 VLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 140 Vi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
|++ |++.|++++..+.+ .|+|+|.+|
T Consensus 148 Viv-g~v~t~e~A~~l~~-aGaD~I~VG 173 (361)
T 3khj_A 148 VIV-GNVVTEEATKELIE-NGADGIKVG 173 (361)
T ss_dssp EEE-EEECSHHHHHHHHH-TTCSEEEEC
T ss_pred EEE-ccCCCHHHHHHHHH-cCcCEEEEe
Confidence 987 67899999998887 699999996
No 260
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.37 E-value=0.00048 Score=59.31 Aligned_cols=148 Identities=14% Similarity=0.150 Sum_probs=91.6
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChh--hhh--cC-------cccccccCChHHHHHHHHHHh----
Q 023070 9 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQR--IAR--RG-------NYGAFLMDNLPLVKSLVEKLA---- 72 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~--~~~--~~-------~~G~~l~~~~~~~~~iv~~v~---- 72 (287)
.|++.=+.+.+++++.+.++ +++.|++.|++-+-.|.. ..+ +. ++|. ++ +.+.+...++.=.
T Consensus 26 ~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt-vl-~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 26 ARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT-VL-DRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp HSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC-CC-SHHHHHHHHHHTCSSEE
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe-Ee-eHHHHHHHHHCCCCEEE
Confidence 57787788899998888887 456789999997654431 111 11 2243 22 3333333222211
Q ss_pred ------------hccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccc-cHHHHHHHHhhC-CC
Q 023070 73 ------------LNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA-DWNAIKAVKNAL-RI 138 (287)
Q Consensus 73 ------------~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~-~~~~i~~i~~~~-~i 138 (287)
+..++++..-+ .+..+ +..+.+.|+|+|-+++- . .. -.++++.++..+ ++
T Consensus 104 ~p~~d~~v~~~~~~~g~~~i~G~------~t~~e-~~~A~~~Gad~vk~FPa--~-------~~~G~~~lk~i~~~~~~i 167 (225)
T 1mxs_A 104 TPGITEDILEAGVDSEIPLLPGI------STPSE-IMMGYALGYRRFKLFPA--E-------ISGGVAAIKAFGGPFGDI 167 (225)
T ss_dssp CSSCCHHHHHHHHHCSSCEECEE------CSHHH-HHHHHTTTCCEEEETTH--H-------HHTHHHHHHHHHTTTTTC
T ss_pred eCCCCHHHHHHHHHhCCCEEEee------CCHHH-HHHHHHCCCCEEEEccC--c-------cccCHHHHHHHHhhCCCC
Confidence 11222322211 11222 34456788888888541 0 11 257888998877 89
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
||++.||| +++.+.++++..|+++|. |++++..+++
T Consensus 168 pvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 168 RFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp EEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred eEEEECCC-CHHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 99999999 568999999856999999 9888765544
No 261
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.35 E-value=0.0027 Score=53.63 Aligned_cols=127 Identities=9% Similarity=0.077 Sum_probs=80.1
Q ss_pred EEEec--CCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCC-
Q 023070 12 FVQFC--ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPN- 88 (287)
Q Consensus 12 ~~Qi~--g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~- 88 (287)
=+-++ +++|+.+.+.+ ++.|+|.|.+|.... .+ .++.+++.. -|++...+...
T Consensus 57 D~kl~DI~~t~~~~v~~~--~~~Gad~vtvh~~~g----------------~~----~i~~~~~~~--gv~vl~~t~~~~ 112 (208)
T 2czd_A 57 DLKLADIPNTNRLIARKV--FGAGADYVIVHTFVG----------------RD----SVMAVKELG--EIIMVVEMSHPG 112 (208)
T ss_dssp EEEECSCHHHHHHHHHHH--HHTTCSEEEEESTTC----------------HH----HHHHHHTTS--EEEEECCCCSGG
T ss_pred EeeeCchHHHHHHHHHHH--HhcCCCEEEEeccCC----------------HH----HHHHHHHhC--CcEEEEecCCcc
Confidence 35666 66666554433 467999999995311 11 244444443 34444333211
Q ss_pred -----hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-CcEEEecCCCCH-HHHHHHHHhcCc
Q 023070 89 -----LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHM-EDVQKCLEETGC 161 (287)
Q Consensus 89 -----~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-ipVi~nGgI~s~-~da~~~l~~~ga 161 (287)
.+....+++...+.|++++.+.+. ..+.++++++..+ -++++.|||+.. .++.++++ .|+
T Consensus 113 ~~~~~~~~v~~~~~~a~~~G~~G~~~~~~------------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~-aGa 179 (208)
T 2czd_A 113 ALEFINPLTDRFIEVANEIEPFGVIAPGT------------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVK-AGA 179 (208)
T ss_dssp GGTTTGGGHHHHHHHHHHHCCSEEECCCS------------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHH-HTC
T ss_pred hhhHHHHHHHHHHHHHHHhCCcEEEECCC------------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHH-cCC
Confidence 233456677788999998865422 1244566766655 367799999862 27888887 599
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|.+.+||+++..++
T Consensus 180 d~vvvGr~I~~a~d 193 (208)
T 2czd_A 180 DYIIVGRAIYNAPN 193 (208)
T ss_dssp SEEEECHHHHTSSS
T ss_pred CEEEEChHHhcCCC
Confidence 99999999987654
No 262
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.35 E-value=0.0012 Score=57.09 Aligned_cols=148 Identities=10% Similarity=0.121 Sum_probs=95.2
Q ss_pred CCEEEEecCCCHHHHHHHHHH-HcCCCCEEEEeccCChh--hh---hc------CcccccccCChHHHHHHHHH------
Q 023070 9 RPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQR--IA---RR------GNYGAFLMDNLPLVKSLVEK------ 70 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~--~~---~~------~~~G~~l~~~~~~~~~iv~~------ 70 (287)
.|++.=|.+.++++..+.++. ++.|++.||+-+-.|.. .. ++ -+.|. ++ +++.+...+++
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGT-Vl-t~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGT-IL-NGEQALAAKEAGATFVV 111 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEEC-CC-SHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECC-cC-CHHHHHHHHHcCCCEEE
Confidence 478888999999999999984 56789999998765541 11 11 12233 22 35544444332
Q ss_pred -----------HhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CC
Q 023070 71 -----------LALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 138 (287)
Q Consensus 71 -----------v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~i 138 (287)
.++ .++|+...+. +.. | +....++|+|+|-+.+... . ...++++.++..+ ++
T Consensus 112 sP~~~~~vi~~~~~-~gi~~ipGv~---Tpt---E-i~~A~~~Gad~vK~FPa~~---~-----gG~~~lkal~~p~p~i 175 (232)
T 4e38_A 112 SPGFNPNTVRACQE-IGIDIVPGVN---NPS---T-VEAALEMGLTTLKFFPAEA---S-----GGISMVKSLVGPYGDI 175 (232)
T ss_dssp CSSCCHHHHHHHHH-HTCEEECEEC---SHH---H-HHHHHHTTCCEEEECSTTT---T-----THHHHHHHHHTTCTTC
T ss_pred eCCCCHHHHHHHHH-cCCCEEcCCC---CHH---H-HHHHHHcCCCEEEECcCcc---c-----cCHHHHHHHHHHhcCC
Confidence 222 1444433321 222 2 3445789999998854311 0 1358899998865 79
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccch
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 177 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf 177 (287)
|++..|||. ++.+.+.++ .|+.++.+|. .+.+|.+.
T Consensus 176 p~~ptGGI~-~~n~~~~l~-aGa~~~vgGs-~l~~~~~i 211 (232)
T 4e38_A 176 RLMPTGGIT-PSNIDNYLA-IPQVLACGGT-WMVDKKLV 211 (232)
T ss_dssp EEEEBSSCC-TTTHHHHHT-STTBCCEEEC-GGGCHHHH
T ss_pred CeeeEcCCC-HHHHHHHHH-CCCeEEEECc-hhcChHHh
Confidence 999999995 899999998 5899888775 44566554
No 263
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.33 E-value=0.00085 Score=57.26 Aligned_cols=153 Identities=12% Similarity=0.116 Sum_probs=97.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHHH-HcCCCCEEEEeccCChh--hhh--cCcc-----cccccCChHHHHHHHHH------
Q 023070 7 EDRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQR--IAR--RGNY-----GAFLMDNLPLVKSLVEK------ 70 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~--~~~--~~~~-----G~~l~~~~~~~~~iv~~------ 70 (287)
...|++.=|.+.++++....++. ++.|++.||+.+-.|.. ..+ +..+ |+.-.-+++.+.+.+++
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 45789999999999999999985 56689999998766641 111 1111 11112245544444333
Q ss_pred -----------HhhccCC------cEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHH
Q 023070 71 -----------LALNLNV------PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK 133 (287)
Q Consensus 71 -----------v~~~~~~------pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~ 133 (287)
.++ .++ |+.-.+. +.. -+....++|+|.|-+++-.. . ...++++.++
T Consensus 91 sP~~~~evi~~~~~-~~v~~~~~~~~~PG~~---Tpt----E~~~A~~~Gad~vK~FPa~~-----~---gG~~~lkal~ 154 (217)
T 3lab_A 91 SPGLTPELIEKAKQ-VKLDGQWQGVFLPGVA---TAS----EVMIAAQAGITQLKCFPASA-----I---GGAKLLKAWS 154 (217)
T ss_dssp ESSCCHHHHHHHHH-HHHHCSCCCEEEEEEC---SHH----HHHHHHHTTCCEEEETTTTT-----T---THHHHHHHHH
T ss_pred eCCCcHHHHHHHHH-cCCCccCCCeEeCCCC---CHH----HHHHHHHcCCCEEEECcccc-----c---cCHHHHHHHH
Confidence 221 123 4433221 122 23445789999997753211 0 1247899998
Q ss_pred hhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 134 NAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 134 ~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
.-+ ++|++..|||+ ++.+.+.++ .|+..+..| ..+..|.+..
T Consensus 155 ~p~p~i~~~ptGGI~-~~N~~~~l~-aGa~~~vgG-s~l~~~~~i~ 197 (217)
T 3lab_A 155 GPFPDIQFCPTGGIS-KDNYKEYLG-LPNVICAGG-SWLTESKLLI 197 (217)
T ss_dssp TTCTTCEEEEBSSCC-TTTHHHHHH-STTBCCEEE-SGGGCHHHHH
T ss_pred hhhcCceEEEeCCCC-HHHHHHHHH-CCCEEEEEC-hhhcChhHHh
Confidence 766 69999999997 799999998 588887665 5666666553
No 264
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=97.32 E-value=0.0066 Score=55.82 Aligned_cols=120 Identities=10% Similarity=0.061 Sum_probs=92.5
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
+++++.+.++ .++.||..+.+..|- +++.-.+.++++++.+ ++.+.+...-+|+.++++++
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~ 207 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYW 207 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 4566666554 667899999997541 3444566777777765 57888888889999999999
Q ss_pred HHHHHHc-CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC--CcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 96 AKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 96 a~~l~~~-G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~--ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++.+++. ++.+| ++.- .+.||+..+++++.++ +||.+.-.+.+..++.++ . ..+|.|.+
T Consensus 208 ~~~l~~~~~i~~i-------EqP~---~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~-~a~d~i~i 269 (372)
T 3cyj_A 208 AGAFAREAGISYL-------EEPV---SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-A-GCVDILQA 269 (372)
T ss_dssp HHHHHHHHCCCEE-------ECSS---CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-H-TTCSEEEE
T ss_pred HHHHHhhcCCcEE-------ECCC---CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-h-CCCCEEec
Confidence 9999998 88776 2211 1357899999998887 799999999999999888 4 68999987
No 265
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.31 E-value=0.0045 Score=54.12 Aligned_cols=76 Identities=20% Similarity=0.215 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.+..++|+.+++.|+++|.|- |-.. . + ....+.++.+++.+++||..-+.|.+..++.+++. .|||+|.++-.
T Consensus 65 ~~p~~~A~~~~~~GA~~isvl--t~~~-~-f--~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~-~GAD~VlL~~~ 137 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVL--TEPH-R-F--GGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARA-FGASAALLIVA 137 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEE--CCCS-S-S--CCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHH-TTCSEEEEEHH
T ss_pred CCHHHHHHHHHHcCCCEEEEe--cchh-h-h--ccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHH-cCCCEEEECcc
Confidence 578899999999999999883 1111 1 1 12457788888899999999999999999998887 69999999999
Q ss_pred hhh
Q 023070 170 LLE 172 (287)
Q Consensus 170 ~l~ 172 (287)
.+.
T Consensus 138 ~l~ 140 (254)
T 1vc4_A 138 LLG 140 (254)
T ss_dssp HHG
T ss_pred chH
Confidence 887
No 266
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.30 E-value=0.0074 Score=53.36 Aligned_cols=140 Identities=20% Similarity=0.190 Sum_probs=94.8
Q ss_pred CCEEEEe---cCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEEE
Q 023070 9 RPLFVQF---CANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSC 81 (287)
Q Consensus 9 ~p~~~Qi---~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~v 81 (287)
.|+++-+ +|.+|++..+.++ +++.|+.+|.|--+... -|..| -..+...+-|++++++. ++|+.+
T Consensus 77 ~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~-------~~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~i 148 (275)
T 2ze3_A 77 IPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGL-------TPTEL-YDLDSQLRRIEAARAAIDASGVPVFL 148 (275)
T ss_dssp SCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSS-------SSSCB-CCHHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCC-------CCCcc-CCHHHHHHHHHHHHHhHhhcCCCeEE
Confidence 5777654 4568988888877 55779999999855421 12233 35555556666665542 677766
Q ss_pred EecCCC-----------ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEec--CCCC
Q 023070 82 KIRVFP-----------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANG--NVRH 148 (287)
Q Consensus 82 KiR~g~-----------~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nG--gI~s 148 (287)
--|... ..+++++=++.++++|++.|.+++. .+.+.++++.+.+++|+-.++ +..+
T Consensus 149 ~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~n~~~~~~~~~ 217 (275)
T 2ze3_A 149 NARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLA-----------LQSQDIRALADALRVPLNVMAFPGSPV 217 (275)
T ss_dssp EEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC-----------CCHHHHHHHHHHCSSCEEEECCTTSCC
T ss_pred EEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCC-----------CCHHHHHHHHHhcCCCEEEecCCCCCC
Confidence 666532 2467788888999999999988754 345778999999999987764 3445
Q ss_pred HHHHHHHHHhcCccEEEEehhhh
Q 023070 149 MEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 149 ~~da~~~l~~~gad~VmiGR~~l 171 (287)
.+ ++- +.|+..|.+|-.++
T Consensus 218 ~~---eL~-~lGv~~v~~~~~~~ 236 (275)
T 2ze3_A 218 PR---ALL-DAGAARVSFGQSLM 236 (275)
T ss_dssp HH---HHH-HTTCSEEECTTHHH
T ss_pred HH---HHH-HcCCcEEEEChHHH
Confidence 43 333 46999998875543
No 267
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.27 E-value=0.0014 Score=58.56 Aligned_cols=91 Identities=20% Similarity=0.228 Sum_probs=63.0
Q ss_pred HHHHHHHHhhccCC-cEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcE
Q 023070 64 VKSLVEKLALNLNV-PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPV 140 (287)
Q Consensus 64 ~~~iv~~v~~~~~~-pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipV 140 (287)
+.+-++++++.... +|.+-+. +. +-++...++|+|+|-++. .+.+.++++++.+ ++||
T Consensus 195 i~~ai~~~r~~~~~~kI~vev~---tl----ee~~eA~~aGaD~I~ld~------------~~~e~l~~~v~~~~~~~~I 255 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVE---NL----DELDDALKAGADIIMLDN------------FNTDQMREAVKRVNGQARL 255 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES---SH----HHHHHHHHTTCSEEEESS------------CCHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHhCCCCcEEEEeC---CH----HHHHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeE
Confidence 34556666665432 4555432 22 234445678999998863 3346667766665 5999
Q ss_pred EEecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 141 LANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 141 i~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
.++||| +++.+.++.+ +|+|++.+|.....-|+
T Consensus 256 ~ASGGI-t~~~i~~~a~-~GvD~isvGsli~~a~~ 288 (296)
T 1qap_A 256 EVSGNV-TAETLREFAE-TGVDFISVGALTKHVRA 288 (296)
T ss_dssp EECCCS-CHHHHHHHHH-TTCSEEECSHHHHEEEC
T ss_pred EEECCC-CHHHHHHHHH-cCCCEEEEeHHHcCCCC
Confidence 999999 8999999988 69999999986655554
No 268
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.26 E-value=0.0034 Score=56.12 Aligned_cols=149 Identities=14% Similarity=0.154 Sum_probs=91.5
Q ss_pred CCCEEEEe---cCCCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCccc-ccccCChHHHHHHHHHHhhccCCcEEEE
Q 023070 8 DRPLFVQF---CANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYG-AFLMDNLPLVKSLVEKLALNLNVPVSCK 82 (287)
Q Consensus 8 ~~p~~~Qi---~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G-~~l~~~~~~~~~iv~~v~~~~~~pv~vK 82 (287)
+.|+++-+ +| +|+...+.++. .+.|+.+|.|--+...+ +.++.+ ..|....+.+.+|-.++....+.++.|-
T Consensus 83 ~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ 159 (298)
T 3eoo_A 83 NLPLLVDIDTGWG-GAFNIARTIRSFIKAGVGAVHLEDQVGQK--RCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIM 159 (298)
T ss_dssp CSCEEEECTTCSS-SHHHHHHHHHHHHHTTCSEEEEECBCCCC--CTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCeEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEECCCCCCc--ccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEE
Confidence 45777544 33 88888888874 56799999997443111 112222 3344444445554443333334445544
Q ss_pred ecCC----CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe---cCCCCHHHHHHH
Q 023070 83 IRVF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---GNVRHMEDVQKC 155 (287)
Q Consensus 83 iR~g----~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n---GgI~s~~da~~~ 155 (287)
-|.. ...+++++=++.+.++|+|.|-+++. .+.+.++++.+.+++||.+| +|-.-.-+..++
T Consensus 160 ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~-----------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL 228 (298)
T 3eoo_A 160 ARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM-----------KTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDEL 228 (298)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-----------CSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHH
T ss_pred EeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC-----------CCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHH
Confidence 4442 23457788888899999999999865 24577888888888999876 332111123333
Q ss_pred HHhcCccEEEEehhhh
Q 023070 156 LEETGCEGVLSAESLL 171 (287)
Q Consensus 156 l~~~gad~VmiGR~~l 171 (287)
- +.|+..|.+|-.++
T Consensus 229 ~-~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 229 K-GANVDIALYCCGAY 243 (298)
T ss_dssp H-HTTCCEEEECSHHH
T ss_pred H-HcCCeEEEEchHHH
Confidence 3 46999999986654
No 269
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=97.20 E-value=0.0028 Score=57.64 Aligned_cols=124 Identities=14% Similarity=0.268 Sum_probs=95.5
Q ss_pred EEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC-Chhh
Q 023070 13 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQD 91 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-~~~~ 91 (287)
..+...+|+.+++.++...+||..+.+..|.. . -.+.++++++..+..+.+..+-+| +..+
T Consensus 128 ~~~~~~~~e~~~~~a~~~~~g~~~~K~Kvg~~--------------~----d~~~v~avR~~~~~~l~vDaN~~~t~~~~ 189 (338)
T 3ijl_A 128 FTIGIDTPDVVRAKTKECAGLFNILKVKLGRD--------------N----DKEMIETIRSVTDLPIAVDANQGWKDRQY 189 (338)
T ss_dssp CBCCCCCHHHHHHHHHHHHTTCSSEEEECSSS--------------C----HHHHHHHHHTTCCCCEEEECTTCCCCHHH
T ss_pred EEEeCCCHHHHHHHHHHHHhcccEEEEecCcH--------------H----HHHHHHHHHhhcCCcEEEECcCCCCCHHH
Confidence 45566799999988875434899999987631 1 345678888888888888888899 5899
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+.++++.+++.++.+| ++.- .+.|++.++++++.+++||.+.-.+.+..++.+++ ..+|.|++
T Consensus 190 A~~~~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~~ 252 (338)
T 3ijl_A 190 ALDMIHWLKEKGIVMI-------EQPM---PKEQLDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGINI 252 (338)
T ss_dssp HHHHHHHHHHTTEEEE-------ECCS---CTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEEE
T ss_pred HHHHHHHHhhCCCCEE-------ECCC---CCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEEe
Confidence 9999999999987665 2211 13578999999999999999998999999887765 36887764
No 270
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=97.19 E-value=0.009 Score=53.21 Aligned_cols=147 Identities=9% Similarity=0.066 Sum_probs=91.8
Q ss_pred CCCEEEEec---CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCccc--ccccCChHHHHHHHHHHhhc---cCCc
Q 023070 8 DRPLFVQFC---ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYG--AFLMDNLPLVKSLVEKLALN---LNVP 78 (287)
Q Consensus 8 ~~p~~~Qi~---g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G--~~l~~~~~~~~~iv~~v~~~---~~~p 78 (287)
+.|+++-+= | +|+...+.++ +++.|+.+|.|--+... .+.++.| +.-+-..+...+-|++++++ .++-
T Consensus 75 ~~PviaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~~--k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~ 151 (290)
T 2hjp_A 75 SIPLIADIDTGFG-NAVNVHYVVPQYEAAGASAIVMEDKTFP--KDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFV 151 (290)
T ss_dssp SSCEEEECTTTTS-SHHHHHHHHHHHHHHTCSEEEEECBCSS--CCC-------CCBCCHHHHHHHHHHHHHHCSSTTSE
T ss_pred CCCEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCC--ccccccccCCCcccCHHHHHHHHHHHHHhcccCCcE
Confidence 467776542 4 8888888887 45679999999855321 1223333 22233344444444544443 2455
Q ss_pred EEEEecC---CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC--CcEEEec---CCCCHH
Q 023070 79 VSCKIRV---FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANG---NVRHME 150 (287)
Q Consensus 79 v~vKiR~---g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~--ipVi~nG---gI~s~~ 150 (287)
|..|.-. +...+++++=++.++++|++.|.++++.. +.+.++++.+.++ +|+++|- ...+.
T Consensus 152 i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~----------~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~- 220 (290)
T 2hjp_A 152 VIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQK----------TPDEILAFVKSWPGKVPLVLVPTAYPQLTE- 220 (290)
T ss_dssp EEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCS----------SSHHHHHHHHHCCCSSCEEECGGGCTTSCH-
T ss_pred EEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCC----------CHHHHHHHHHHcCCCCCEEEeccCCCCCCH-
Confidence 5555432 22367888889999999999999987432 2356788888888 9999873 23343
Q ss_pred HHHHHHHhcC-ccEEEEehhhh
Q 023070 151 DVQKCLEETG-CEGVLSAESLL 171 (287)
Q Consensus 151 da~~~l~~~g-ad~VmiGR~~l 171 (287)
.+ |.+.| +..|.+|-.++
T Consensus 221 --~e-L~~lG~v~~v~~~~~~~ 239 (290)
T 2hjp_A 221 --AD-IAALSKVGIVIYGNHAI 239 (290)
T ss_dssp --HH-HHTCTTEEEEEECSHHH
T ss_pred --HH-HHhcCCeeEEEechHHH
Confidence 33 33479 99999986654
No 271
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=97.19 E-value=0.0019 Score=58.51 Aligned_cols=138 Identities=14% Similarity=0.189 Sum_probs=89.3
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCC
Q 023070 9 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 86 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g 86 (287)
.|+-.-+...+|+++.+.++ +.||..+.+..|.+ |.. ++.-.+.++++++.+ ++.+.+..+-+
T Consensus 70 v~~~~ti~~~~~e~~~~~~~--~~G~~~~KiKvg~~---------g~~----~~~d~~~v~avR~~~G~~~~L~vDaN~~ 134 (327)
T 2opj_A 70 VPVNATVPAVGPEEAARIVA--SSGCTTAKVKVAER---------GQS----EANDVARVEAVRDALGPRGRVRIDVNGA 134 (327)
T ss_dssp EEBCEEECSCCHHHHHHHHH--HHCCSEEEEECCC-------------------CHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eEEeEEeCCCCHHHHHHHHH--HCCCCEEEEEeCCC---------CCC----HHHHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 35555566678888655544 56999999987643 112 222346677777765 57888888889
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+.++++++++.+++.++.+| ++. . .+++.++++++.+++||.+.-.+.+..++.++++...+|.|.+
T Consensus 135 w~~~~A~~~~~~L~~~~l~~i-------EqP----~-~~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~i 202 (327)
T 2opj_A 135 WDVDTAVRMIRLLDRFELEYV-------EQP----C-ATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVL 202 (327)
T ss_dssp SCHHHHHHHHHHHGGGCEEEE-------ECC----S-SSHHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEE
T ss_pred CCHHHHHHHHHHHHhcCCcEE-------eCC----C-CCHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 999999999999999887655 221 1 2577888999999999999999999999999888777899887
Q ss_pred ehhhhhC
Q 023070 167 AESLLEN 173 (287)
Q Consensus 167 GR~~l~n 173 (287)
==.-.+.
T Consensus 203 k~~~~GG 209 (327)
T 2opj_A 203 KVQPLGG 209 (327)
T ss_dssp CHHHHTS
T ss_pred CccccCC
Confidence 4433333
No 272
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.16 E-value=0.0085 Score=54.03 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=92.6
Q ss_pred CCCEEEEe---cCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEE
Q 023070 8 DRPLFVQF---CANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVS 80 (287)
Q Consensus 8 ~~p~~~Qi---~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~ 80 (287)
+.|+++-+ +| +|+...+.++ +++.|+.+|.|--+... .+.++.|+.-+-..+...+-|++++++. ++-|.
T Consensus 101 ~~PviaD~d~Gyg-~~~~v~~tv~~l~~aGaagv~iED~~~~--k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ 177 (318)
T 1zlp_A 101 NLCVVVDGDTGGG-GPLNVQRFIRELISAGAKGVFLEDQVWP--KKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLV 177 (318)
T ss_dssp SSEEEEECTTCSS-SHHHHHHHHHHHHHTTCCEEEEECBCSS--CCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCEEEeCCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCCC--ccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEE
Confidence 46777665 35 8888888777 55679999999755321 1223334332334444444455554432 34444
Q ss_pred EEecCC--CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe---cC---CCCHHHH
Q 023070 81 CKIRVF--PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---GN---VRHMEDV 152 (287)
Q Consensus 81 vKiR~g--~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n---Gg---I~s~~da 152 (287)
.|.-.. ...+++++=++.++++|+|.|.+++. .+.+.++++.+.+++|+.+| || ..+.+
T Consensus 178 ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~-----------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~-- 244 (318)
T 1zlp_A 178 ARTDARAPHGLEEGIRRANLYKEAGADATFVEAP-----------ANVDELKEVSAKTKGLRIANMIEGGKTPLHTPE-- 244 (318)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-----------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHH--
T ss_pred EeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC-----------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHH--
Confidence 443211 11257788889999999999999854 34577899999999999765 32 34433
Q ss_pred HHHHHhcCccEEEEehhhh
Q 023070 153 QKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l 171 (287)
++- +.|+..|.+|-.++
T Consensus 245 -eL~-~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 245 -EFK-EMGFHLIAHSLTAV 261 (318)
T ss_dssp -HHH-HHTCCEEEECSHHH
T ss_pred -HHH-HcCCeEEEEchHHH
Confidence 333 46999999987655
No 273
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=97.15 E-value=0.0054 Score=58.03 Aligned_cols=124 Identities=13% Similarity=0.115 Sum_probs=93.2
Q ss_pred CCCHHHHHHHHH-HHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHH
Q 023070 17 ANDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~ 93 (287)
+.+|+++++.|+ .++ .||..|.|..|.+ +++.-.+.++++++.. ++.+.+...-+|+..+++
T Consensus 180 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~ 244 (450)
T 3mzn_A 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFPEARLALDPNGAWKLDEAV 244 (450)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 358999998887 455 5999999987642 2333355677777765 577888888899999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCcccc----HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~----~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
.+++.+++. +.+| ++.-. +.| ++.++++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 245 ~~~~~L~~~-i~~i-------EeP~~---~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~ 310 (450)
T 3mzn_A 245 RVLEPIKHL-LSYA-------EDPCG---QEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLA 310 (450)
T ss_dssp HHHGGGGGG-CSEE-------ESSBC---CBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBC
T ss_pred HHHHHhhhc-ccee-------eCCCC---cccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 999999887 6655 22111 223 67889999999999988777889999999998777887754
No 274
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=97.14 E-value=0.0036 Score=59.60 Aligned_cols=124 Identities=13% Similarity=0.074 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHH-HHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHH
Q 023070 17 ANDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 17 g~~~~~~~~aA~-~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~ 93 (287)
+.+|+++++.|+ .++ .||..|.|..|.+ +++.-.+.++++++.. ++.+.+...-+|+..+++
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai 262 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFPHARVTLDPNGAWSLNEAI 262 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHH
Confidence 468999998887 466 5999999987642 2233345677777765 677888888889999999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCcccc----HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~----~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
.+++.+++. +.+| ++.-. +.| ++.++++++.+++||.+.=-+.++.++.++++...+|.+++
T Consensus 263 ~~~~~Le~~-l~~i-------EeP~~---~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~ 328 (470)
T 3p0w_A 263 ALCKGQGHL-VAYA-------EDPCG---PEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLA 328 (470)
T ss_dssp HHHTTCTTT-CSEE-------ESCBC---CBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBC
T ss_pred HHHHhcccc-ceee-------cCCCC---hhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 999988876 6555 22111 223 67889999999999998777889999999999777887754
No 275
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.13 E-value=0.00077 Score=57.67 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=64.3
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCC--CCcccc-H-HHHHHHHhhC-C
Q 023070 63 LVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG--KKFRAD-W-NAIKAVKNAL-R 137 (287)
Q Consensus 63 ~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~--~~~~~~-~-~~i~~i~~~~-~ 137 (287)
.+.+.++..++. ++.+.+=+. .. .+ .+++.+.|.+.|.++++..-++.. .+...+ . ..++.+++.. +
T Consensus 99 e~~~~~~~a~~~-Gl~~iv~v~--~~-~e----~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~ 170 (219)
T 2h6r_A 99 DIEAVINKCKNL-GLETIVCTN--NI-NT----SKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKD 170 (219)
T ss_dssp HHHHHHHHHHHH-TCEEEEEES--SS-HH----HHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHC-CCeEEEEeC--Cc-hH----HHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCC
Confidence 355555554432 554544432 22 11 244566788888888776421110 111112 3 3344455544 7
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 138 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 138 ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
+||++.|||++++++..+.+ .|+|||.+|++++.-+++..
T Consensus 171 ~~ii~ggGI~~~~~~~~~~~-~gaDgvlVGsAi~~~~d~~~ 210 (219)
T 2h6r_A 171 VKVLCGAGISKGEDVKAALD-LGAEGVLLASGVVKAKNVEE 210 (219)
T ss_dssp CEEEECSSCCSHHHHHHHHT-TTCCCEEESHHHHTCSSHHH
T ss_pred CeEEEEeCcCcHHHHHHHhh-CCCCEEEEcHHHhCcccHHH
Confidence 99999999999999998876 69999999999997666544
No 276
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.10 E-value=0.0019 Score=59.99 Aligned_cols=128 Identities=12% Similarity=0.027 Sum_probs=92.7
Q ss_pred HHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHH
Q 023070 20 PEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 20 ~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a 96 (287)
++++.+.|+ .++.||..+.+..|.+.. +-. -..+++.-.+.++++|+.+ ++++.+...-+|+..+++.++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~------~~~-~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~~~A~~~~ 221 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGR------HMP-LWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVL 221 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTT------TSC-HHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCc------ccc-ccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCHHHHHHHH
Confidence 466666555 567899999999874321 000 0012455667788888864 688999998999999999999
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh-----CCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~-----~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+.+++.++.+| ++ |.+.|++.++++++. +.+||...-.+. ..++.++++...+|.|.+
T Consensus 222 ~~L~~~~l~~i-------Ee----P~~~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~ 284 (392)
T 3v5c_A 222 AALSDVNLYWL-------EA----AFHEDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHTTTSCCCEE-------EC----SSSCCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECC
T ss_pred HhcccCCCeEE-------eC----CCCcCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEe
Confidence 99999888777 22 112467777888765 678888777777 788999998777888866
No 277
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.06 E-value=0.0086 Score=53.25 Aligned_cols=144 Identities=11% Similarity=0.150 Sum_probs=95.7
Q ss_pred CCCEEEEe---cCCCHHHHHHHHH-HHcCCCCEEEEeccC-ChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcE
Q 023070 8 DRPLFVQF---CANDPEILLNAAR-RVEPYCDYVDINLGC-PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPV 79 (287)
Q Consensus 8 ~~p~~~Qi---~g~~~~~~~~aA~-~~~~g~d~IdiN~gc-P~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv 79 (287)
+.|+++-+ +| +|++..+.++ +++.|+++|.|--+. |.++ ++..+. +-..+...+-|++++++- ++-|
T Consensus 82 ~~PviaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrc---gh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i 156 (287)
T 3b8i_A 82 RLPVIADADHGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQF---GRKSTD-LICVEEGVGKIRAALEARVDPALTI 156 (287)
T ss_dssp SSCEEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCT---TTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEE
T ss_pred CCCEEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCcccc---CCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEE
Confidence 46777665 35 8888888887 456799999998653 3222 333334 455666666666665542 3445
Q ss_pred EEEecC-CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe-cC---CCCHHHHHH
Q 023070 80 SCKIRV-FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN-GN---VRHMEDVQK 154 (287)
Q Consensus 80 ~vKiR~-g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n-Gg---I~s~~da~~ 154 (287)
..|.-. ....+++++=++.++++|++.|.+++. .+.+.++++.+.+++|++.. || ..|.+ +
T Consensus 157 ~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~---e 222 (287)
T 3b8i_A 157 IARTNAELIDVDAVIQRTLAYQEAGADGICLVGV-----------RDFAHLEAIAEHLHIPLMLVTYGNPQLRDDA---R 222 (287)
T ss_dssp EEEEETTTSCHHHHHHHHHHHHHTTCSEEEEECC-----------CSHHHHHHHHTTCCSCEEEECTTCGGGCCHH---H
T ss_pred EEechhhhcCHHHHHHHHHHHHHcCCCEEEecCC-----------CCHHHHHHHHHhCCCCEEEeCCCCCCCCCHH---H
Confidence 555433 123467888899999999999999854 23477899999999998843 32 34443 3
Q ss_pred HHHhcCccEEEEehhhh
Q 023070 155 CLEETGCEGVLSAESLL 171 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l 171 (287)
+- +.|+..|..|-.++
T Consensus 223 L~-~lGv~~v~~~~~~~ 238 (287)
T 3b8i_A 223 LA-RLGVRVVVNGHAAY 238 (287)
T ss_dssp HH-HTTEEEEECCCHHH
T ss_pred HH-HcCCcEEEEChHHH
Confidence 33 46999999886554
No 278
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.01 E-value=0.0035 Score=53.63 Aligned_cols=136 Identities=11% Similarity=0.086 Sum_probs=82.3
Q ss_pred EEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChh
Q 023070 13 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQ 90 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~ 90 (287)
+-+. ..|+.+.+++ .+.|+|.|.+|..+. .+.+.+.++.+++.- ...+.|-+-..++.+
T Consensus 65 lKl~-Dip~t~~~~~--~~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~ 125 (221)
T 3exr_A 65 TKCA-DAGGTVAKNN--AVRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVELYGDWTYD 125 (221)
T ss_dssp EEEC-SCHHHHHHHH--HTTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEECCSSCCHH
T ss_pred EEee-ccHHHHHHHH--HHcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEEcCCCCHH
Confidence 4454 6688877763 667999999995311 233555556555431 133444443434433
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
. ++.+.+.|++.+.+|-....+..+. ......++.+++.. +++|.+.||| +++++..+.+ .|+|.+++||
T Consensus 126 ~----~~~~~~~~~~~~v~~~a~~~~~~Gv--v~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~-aGad~~VvG~ 197 (221)
T 3exr_A 126 Q----AQQWLDAGISQAIYHQSRDALLAGE--TWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEG-VDVFTFIAGR 197 (221)
T ss_dssp H----HHHHHHTTCCEEEEECCHHHHHHTC--CCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTT-CCCSEEEECH
T ss_pred H----HHHHHcCCHHHHHHHHHHhcCCCcc--ccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHH-CCCCEEEECc
Confidence 3 3345678999998873222111111 12233455555543 6889999999 5677776666 6999999999
Q ss_pred hhhhCcc
Q 023070 169 SLLENPA 175 (287)
Q Consensus 169 ~~l~nP~ 175 (287)
+++..++
T Consensus 198 ~I~~a~d 204 (221)
T 3exr_A 198 GITEAKN 204 (221)
T ss_dssp HHHTSSS
T ss_pred hhhCCCC
Confidence 9886544
No 279
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.00 E-value=0.0065 Score=54.04 Aligned_cols=90 Identities=20% Similarity=0.305 Sum_probs=59.4
Q ss_pred HHHHHHhhccC--CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEE
Q 023070 66 SLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 141 (287)
Q Consensus 66 ~iv~~v~~~~~--~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi 141 (287)
+-++.+++..+ .+|.+-++ + .+-++.+.++|+|+|-++..+. +.++++.+.+ ++|++
T Consensus 184 ~av~~ar~~~~~~~~IgVev~---t----~eea~eA~~aGaD~I~ld~~~~------------~~~k~av~~v~~~ipi~ 244 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEVEVR---S----LEELEEALEAGADLILLDNFPL------------EALREAVRRVGGRVPLE 244 (286)
T ss_dssp HHHHHHHHHSCTTSCEEEEES---S----HHHHHHHHHHTCSEEEEESCCH------------HHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHhCCCCCEEEEEeC---C----HHHHHHHHHcCCCEEEECCCCH------------HHHHHHHHHhCCCCeEE
Confidence 34555555542 45555321 2 2334556678999999985322 2334443333 69999
Q ss_pred EecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 142 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 142 ~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
++||| +++.+.++.+ +|+|+|.+|.....-|++
T Consensus 245 AsGGI-t~eni~~~a~-tGvD~IsVgs~~~~a~~~ 277 (286)
T 1x1o_A 245 ASGNM-TLERAKAAAE-AGVDYVSVGALTHSAKAL 277 (286)
T ss_dssp EESSC-CHHHHHHHHH-HTCSEEECTHHHHSCCCC
T ss_pred EEcCC-CHHHHHHHHH-cCCCEEEEcHHHcCCCce
Confidence 99999 5899998887 799999999877665653
No 280
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.96 E-value=0.0079 Score=54.23 Aligned_cols=124 Identities=15% Similarity=0.040 Sum_probs=84.0
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. .+..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~~ai~l 98 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCG----------NTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATSTAIEL 98 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHHHHHHH
Confidence 6778888777 5677999998872 223333334555566666665554 589999875 377899999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 99 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~ 159 (316)
T 3e96_A 99 GNAAKAAGADAVMIHMPIHPY---VTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAP 159 (316)
T ss_dssp HHHHHHHTCSEEEECCCCCSC---CCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTT
T ss_pred HHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHc
Confidence 999999999999875322110 0111234667888888889986 66 65567777777664
No 281
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.95 E-value=0.0015 Score=60.11 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+..+.++.+.++|++.|+++.-.. . ...-|+.++.+++.. ++||++ |+|.|++++..+.+ .|||+|.+|
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G-----~-~~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~-aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHA-----H-AKYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLAS-CGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCC-----S-SHHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHH-TTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCC-----C-cHhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHH-cCCCEEEEc
Confidence 5677889999999999999963221 1 023478899999875 788887 67999999998888 599999985
No 282
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.92 E-value=0.0024 Score=56.54 Aligned_cols=91 Identities=15% Similarity=0.251 Sum_probs=60.7
Q ss_pred HHHHHHHhhccC--CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh-----CC
Q 023070 65 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-----LR 137 (287)
Q Consensus 65 ~~iv~~v~~~~~--~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~-----~~ 137 (287)
.+-++++++... .++.+-+. +.++ ++...++|+|+|-++.. +.+.++++++. .+
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~---tlee----~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~~ 229 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE---SFEE----AKNAMNAGADIVMCDNL------------SVLETKEIAAYRDAHYPF 229 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES---SHHH----HHHHHHHTCSEEEEETC------------CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCceEEEEcC---CHHH----HHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCC
Confidence 455666666553 35555432 2222 34445689999988741 12344443332 24
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 138 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 138 ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
+||.++||| +++.+.++.+ +|+|++.+|+.....|++
T Consensus 230 ~~i~AsGGI-~~~ni~~~~~-aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 230 VLLEASGNI-SLESINAYAK-SGVDAISVGALIHQATFI 266 (273)
T ss_dssp CEEEEESSC-CTTTHHHHHT-TTCSEEECTHHHHTCCCC
T ss_pred cEEEEECCC-CHHHHHHHHH-cCCcEEEEcHHhcCCCCC
Confidence 999999999 8899999987 699999999987766654
No 283
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.92 E-value=0.0071 Score=52.09 Aligned_cols=104 Identities=15% Similarity=0.258 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCC---ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCC
Q 023070 62 PLVKSLVEKLALNLNVPVSCKIRVFP---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRI 138 (287)
Q Consensus 62 ~~~~~iv~~v~~~~~~pv~vKiR~g~---~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~i 138 (287)
..+..+++.+...-++-|+|.--.+. +..+..++|+.+++.|+.+|.+. ..+.++++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--------------~~~~i~~ir~~v~~ 70 (232)
T 3igs_A 5 SLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE--------------GIDNLRMTRSLVSV 70 (232)
T ss_dssp CHHHHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE--------------SHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC--------------CHHHHHHHHHhcCC
Confidence 44566666663333455555432222 35577899999999999998762 24779999999999
Q ss_pred cEEE-e----cC--C---CCHHHHHHHHHhcCccEEEEehhhhhCccchhch
Q 023070 139 PVLA-N----GN--V---RHMEDVQKCLEETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 139 pVi~-n----Gg--I---~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
||++ + || + .+.+++.++++ .|+|.|.++.+...+|....++
T Consensus 71 Pvig~~k~d~~~~~~~I~~~~~~i~~~~~-~Gad~V~l~~~~~~~p~~l~~~ 121 (232)
T 3igs_A 71 PIIGIIKRDLDESPVRITPFLDDVDALAQ-AGAAIIAVDGTARQRPVAVEAL 121 (232)
T ss_dssp CEEEECBCCCSSCCCCBSCSHHHHHHHHH-HTCSEEEEECCSSCCSSCHHHH
T ss_pred CEEEEEeecCCCcceEeCccHHHHHHHHH-cCCCEEEECccccCCHHHHHHH
Confidence 9985 1 33 3 46678988887 5999999998888888654443
No 284
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.92 E-value=0.02 Score=50.87 Aligned_cols=126 Identities=16% Similarity=0.138 Sum_probs=84.4
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 86 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCG----------TTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS-NSTAEAIA 86 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHHHH
Confidence 37778888777 5677999998872 223333345555566666666544 4899887532 35678999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE------ecCCCCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA------NGNVRHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~------nGgI~s~~da~~~l~ 157 (287)
+++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+. .|---+++.+.++.+
T Consensus 87 la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 87 FVRHAQNAGADGVLIVSPYYNK---PTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 9999999999999776432211 00012245677888888999875 343457888887765
No 285
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.89 E-value=0.028 Score=50.27 Aligned_cols=131 Identities=16% Similarity=0.095 Sum_probs=86.7
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 102 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSG----------TTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAHSIRL 102 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHH
Confidence 6778888777 5677999998872 223333334555566666666554 589988753 2466899999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHHhcCccE
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEG 163 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~~~gad~ 163 (287)
++.+++.|+|++.+..-.... .+...-.++++.+.+++++||+ +| |---+++.+.++.+...+-|
T Consensus 103 a~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 173 (304)
T 3l21_A 103 AKACAAEGAHGLLVVTPYYSK---PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVG 173 (304)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEE
T ss_pred HHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEE
Confidence 999999999999886432211 0111234667888888899986 54 55567888877765333333
No 286
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.88 E-value=0.012 Score=53.00 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=83.6
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. +..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~ 97 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNG----------NTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIE 97 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECc----------ccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHH
Confidence 36777888777 5677999988762 223333344555566666666544 5899998755 6788999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE-e-cCCCCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-N-GNVRHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~-n-GgI~s~~da~~~l~ 157 (287)
+++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+. | .|+-+++.+.++.+
T Consensus 98 la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~ 159 (314)
T 3d0c_A 98 LGKSAIDSGADCVMIHQPVHPY---ITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAP 159 (314)
T ss_dssp HHHHHHHTTCSEEEECCCCCSC---CCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHc
Confidence 9999999999999876332211 00012246677888888999864 4 22267787777754
No 287
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.87 E-value=0.0037 Score=55.24 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.+..++|+.+++.|+++|.|-.- .. + + .-..+.++.+++.+++||+..+.|.++.++.++.. .|||+|.++-.
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd--~~-~-f--~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~-~GAD~VlLi~a 151 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTD--TP-S-F--QGAPEFLTAARQACSLPALRKDFLFDPYQVYEARS-WGADCILIIMA 151 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECC--ST-T-T--CCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHH-TTCSEEEEETT
T ss_pred CCHHHHHHHHHHCCCCEEEEecc--cc-c-c--CCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHH-cCCCEEEEccc
Confidence 47889999999999999977521 11 1 1 13567888999999999999999999999999887 69999999988
Q ss_pred hhhC
Q 023070 170 LLEN 173 (287)
Q Consensus 170 ~l~n 173 (287)
++.+
T Consensus 152 ~L~~ 155 (272)
T 3tsm_A 152 SVDD 155 (272)
T ss_dssp TSCH
T ss_pred ccCH
Confidence 7743
No 288
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.81 E-value=0.0021 Score=62.18 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=58.9
Q ss_pred HHHHHHHHcC---CCEEEEeccCCCCcC-CCC-ccccHHHHHHHHhh------CCCcEEEecCCCCHHHHHHHHHh----
Q 023070 94 KYAKMLEDAG---CSLLAVHGRTRDEKD-GKK-FRADWNAIKAVKNA------LRIPVLANGNVRHMEDVQKCLEE---- 158 (287)
Q Consensus 94 ~~a~~l~~~G---~~~I~vh~rt~~~~~-~~~-~~~~~~~i~~i~~~------~~ipVi~nGgI~s~~da~~~l~~---- 158 (287)
+-+....+.| +|+|.+......... ... .+..++.++++++. .++||++-||| +++++.++++.
T Consensus 119 eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~ 197 (540)
T 3nl6_A 119 EEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSS 197 (540)
T ss_dssp HHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCT
T ss_pred HHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhccc
Confidence 3355667889 999998654433221 111 12447777777665 48999999999 68999999972
Q ss_pred ---cCccEEEEehhhhhCccch
Q 023070 159 ---TGCEGVLSAESLLENPALF 177 (287)
Q Consensus 159 ---~gad~VmiGR~~l~nP~lf 177 (287)
.|+|+|.++++++..|+..
T Consensus 198 g~~~GadgvAVvsaI~~a~dp~ 219 (540)
T 3nl6_A 198 NGKRSLDGICVVSDIIASLDAA 219 (540)
T ss_dssp TSSCBCSCEEESHHHHTCTTHH
T ss_pred ccccCceEEEEeHHHhcCCCHH
Confidence 5899999999999766543
No 289
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=96.81 E-value=0.01 Score=56.26 Aligned_cols=123 Identities=11% Similarity=0.076 Sum_probs=91.9
Q ss_pred CCHHHHHHHHH-HHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~ 94 (287)
.+|+++++.|+ .++ .||..+.|..|.+ +++.-.+.++++++.. ++.+.+...-+|+..+++.
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~~ 248 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQ 248 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCCCHHHHHH
Confidence 58999998877 455 5999999987632 2233345677777765 6788888888999999999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCcccc----HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~----~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+++.+++. +.+| ++.-. +.| ++.++++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 249 ~~~~L~~~-l~~i-------EeP~~---~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~ 313 (455)
T 3pfr_A 249 LCKGLNDV-LTYA-------EDPCI---GENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLA 313 (455)
T ss_dssp HHTTCTTT-CSEE-------ESCBC---CBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBC
T ss_pred HHHhhccc-ceee-------ecCCC---hhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 99988876 6555 22111 223 67889999999999988767889999999998777887754
No 290
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.81 E-value=0.008 Score=51.22 Aligned_cols=91 Identities=31% Similarity=0.402 Sum_probs=72.0
Q ss_pred CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHH
Q 023070 77 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 156 (287)
Q Consensus 77 ~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l 156 (287)
.||..=+|. .+.+++..+++.+.+.|++.|-|+-|+. ..++.|+.+++.++-++|+.|-|.|.++++.++
T Consensus 13 ~~vi~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t~---------~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai 82 (217)
T 3lab_A 13 KPLIPVIVI-DDLVHAIPMAKALVAGGVHLLEVTLRTE---------AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp CSEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH
T ss_pred CCEEEEEEc-CCHHHHHHHHHHHHHcCCCEEEEeCCCc---------cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHH
Confidence 355544554 4678999999999999999999987753 345889999998877899999999999999999
Q ss_pred HhcCccEEEEehhhhhCccchhchh
Q 023070 157 EETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 157 ~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+ .||+.++.= -.+|.+.+..+
T Consensus 83 ~-AGA~fivsP---~~~~evi~~~~ 103 (217)
T 3lab_A 83 D-AGAQFIVSP---GLTPELIEKAK 103 (217)
T ss_dssp H-HTCSEEEES---SCCHHHHHHHH
T ss_pred H-cCCCEEEeC---CCcHHHHHHHH
Confidence 8 599999761 14777766544
No 291
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=96.80 E-value=0.01 Score=53.87 Aligned_cols=123 Identities=9% Similarity=-0.019 Sum_probs=87.8
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCC
Q 023070 10 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPN 88 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~ 88 (287)
|+-..+.|.+++.+ .+.++.||..+.+..| ++ -.+.++++++.+ ++.+.+..+-+|+
T Consensus 121 ~~~~~~~g~~~e~~---~~~~~~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~~ 178 (342)
T 2okt_A 121 AYGATASGLSNKQL---ESLKATKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESLD 178 (342)
T ss_dssp ECEEEESSCCHHHH---HHHHHHCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCCC
T ss_pred eeeEEEecCCHHHH---HHHHHcCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 33444424444555 3345679999998764 23 357788888876 5667888788899
Q ss_pred hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+++ ++++.+++.++.+| ++.-. +.|++..++ +.+++||.+.=.+.+..++.++++...+|.|.+-
T Consensus 179 ~~~A-~~~~~l~~~~i~~i-------EqP~~---~~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k 244 (342)
T 2okt_A 179 RQDF-TQLQLLAREQVLYI-------EEPFK---DISMLDEVA--DGTIPPIALDEKATSLLDIINLIELYNVKVVVLK 244 (342)
T ss_dssp GGGH-HHHHHHGGGCEEEE-------ECCCS---SGGGGGGSC--TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEEC
T ss_pred HHHH-HHHHHHhhCCCcEE-------ECCCC---CccHHHHHH--hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEC
Confidence 9999 99999999887666 21110 234444444 4568999999999999999999988889999873
No 292
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.79 E-value=0.04 Score=49.20 Aligned_cols=126 Identities=13% Similarity=0.084 Sum_probs=83.8
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~l 99 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGG----------TTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHASIDL 99 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHHHHH
Confidence 6777878777 5677999998872 223333344555566666666544 589988753 2456889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHHh
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEE 158 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~~ 158 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+.
T Consensus 100 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 165 (301)
T 1xky_A 100 TKKATEVGVDAVMLVAPYYNK---PSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEI 165 (301)
T ss_dssp HHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred HHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC
Confidence 999999999999776332211 0011224667788888899986 45 333578888777653
No 293
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.75 E-value=0.053 Score=48.16 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=82.5
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 87 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCG----------TTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEAVHL 87 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 7777888777 5677999998872 223333334555566666665544 488887753 2456889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL 156 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l 156 (287)
++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.
T Consensus 88 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 88 TAHAKEVGADGALVVVPYYNK---PTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 999999999999776332211 0111224667788888899976 45 3335788888776
No 294
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.74 E-value=0.046 Score=48.49 Aligned_cols=125 Identities=14% Similarity=0.041 Sum_probs=83.3
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 86 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVG----------TTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEAIE 86 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHH
Confidence 37778888777 5678999999872 223333344555566666665544 488888753 245678999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL 156 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l 156 (287)
+++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.
T Consensus 87 la~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 87 LSVFAEDVGADAVLSITPYYNK---PTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 9999999999999776332211 0001224667788888899986 45 4335788888776
No 295
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.73 E-value=0.043 Score=49.10 Aligned_cols=124 Identities=16% Similarity=0.092 Sum_probs=82.9
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-~st~~ai~l 99 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLG----------TTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT-NSTEKTLKL 99 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC-ccHHHHHHH
Confidence 7778888777 5677999998872 223333344555566666665544 4899887532 356889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKCL 156 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~l 156 (287)
++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+ +| .|+ -+++.+.++.
T Consensus 100 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 100 VKQAEKLGANGVLVVTPYYNK---PTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 999999999999776432211 0011224667788888899986 44 343 5788888776
No 296
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.73 E-value=0.044 Score=48.82 Aligned_cols=125 Identities=16% Similarity=0.121 Sum_probs=82.7
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 94 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVG----------TTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEAIAL 94 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHH
Confidence 6777888777 5678999999873 223333334555566666665544 489988742 2467899999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 95 a~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 95 SQAAEKAGADYTLSVVPYYNK---PSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAE 159 (297)
T ss_dssp HHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHc
Confidence 999999999999776332211 0001224667888888899986 44 44456777776654
No 297
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.73 E-value=0.033 Score=49.67 Aligned_cols=126 Identities=17% Similarity=0.123 Sum_probs=83.7
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 86 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVG----------TTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-NNPVEAVR 86 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-CCHHHHHH
Confidence 37778888777 5678999998872 223333344555566666665544 4888887532 45678999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
+++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 87 la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 87 YAQHAQQAGADAVLCVAGYYNR---PSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHHHTCSEEEECCCTTTC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 9999999999999776332211 0001224667788888899986 45 43457888877764
No 298
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.72 E-value=0.028 Score=49.62 Aligned_cols=111 Identities=23% Similarity=0.292 Sum_probs=71.9
Q ss_pred ccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCC-EEEEe-ccCCCCcCCCCccccHHHHH
Q 023070 53 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCS-LLAVH-GRTRDEKDGKKFRADWNAIK 130 (287)
Q Consensus 53 ~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~-~I~vh-~rt~~~~~~~~~~~~~~~i~ 130 (287)
-||..+.+..++.++- ..+.||.+|.....+.++....++.+...|.. .+.+| |.+.-+.+ .....|+..+.
T Consensus 127 Igs~~~~n~~ll~~~a-----~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y-~~~~vdl~~i~ 200 (276)
T 1vs1_A 127 IGARNMQNFPLLREVG-----RSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPS-TRFTLDVAAVA 200 (276)
T ss_dssp ECGGGTTCHHHHHHHH-----HHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCS-SSSBCBHHHHH
T ss_pred ECcccccCHHHHHHHH-----ccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCc-CcchhCHHHHH
Confidence 3455555555544443 24899999977666778888888888899984 44556 44221111 12257889899
Q ss_pred HHHhhCCCcEEE-ec---CCCC--HHHHHHHHHhcCccEEEEehhh
Q 023070 131 AVKNALRIPVLA-NG---NVRH--MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 131 ~i~~~~~ipVi~-nG---gI~s--~~da~~~l~~~gad~VmiGR~~ 170 (287)
.+++..++||++ +. |.++ ..-+...+. .||||+||=+-+
T Consensus 201 ~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva-~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 201 VLKEATHLPVIVDPSHPAGRRSLVPALAKAGLA-AGADGLIVEVHP 245 (276)
T ss_dssp HHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHH-TTCSEEEEEBCS
T ss_pred HHHHHhCCCEEEeCCCCCCccchHHHHHHHHHH-cCCCEEEEEecC
Confidence 999887899975 22 4332 344445555 699999997654
No 299
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=96.72 E-value=0.026 Score=51.92 Aligned_cols=89 Identities=16% Similarity=0.254 Sum_probs=65.0
Q ss_pred CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCC----------------------cC----------------
Q 023070 77 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE----------------------KD---------------- 118 (287)
Q Consensus 77 ~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~----------------------~~---------------- 118 (287)
-|.++.+-.+.+.+...++++++++.|++.|.|+--+... ..
T Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 202 (370)
T 1gox_A 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSS 202 (370)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHH
T ss_pred CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHH
Confidence 5666766555566667888999999999999886322100 00
Q ss_pred ----CCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 119 ----GKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 119 ----~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
......+|+.++++++.+++||+. +++.+++++..+.+ .|+|+|.++
T Consensus 203 ~v~~~~~~~~~~~~i~~l~~~~~~pv~v-K~~~~~e~a~~a~~-~Gad~I~vs 253 (370)
T 1gox_A 203 YVAGQIDRSLSWKDVAWLQTITSLPILV-KGVITAEDARLAVQ-HGAAGIIVS 253 (370)
T ss_dssp HHHHTBCTTCCHHHHHHHHHHCCSCEEE-ECCCSHHHHHHHHH-TTCSEEEEC
T ss_pred HHHhhcCccchHHHHHHHHHHhCCCEEE-EecCCHHHHHHHHH-cCCCEEEEC
Confidence 001124688899999999999996 77899999998888 599999985
No 300
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.72 E-value=0.045 Score=49.19 Aligned_cols=125 Identities=17% Similarity=0.145 Sum_probs=83.0
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ai~l 109 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVG----------TTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSEAVEL 109 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHH
Confidence 6777888777 5678999998772 223333334555566666665544 589988743 2467889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 110 a~~A~~~Gadavlv~~P~y~~---~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 110 AKHAEKAGADAVLVVTPYYNR---PNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 999999999999776432211 0001234667888888899986 44 44457788877776
No 301
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.71 E-value=0.045 Score=49.80 Aligned_cols=125 Identities=16% Similarity=0.044 Sum_probs=82.9
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~ 117 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLG----------SGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG-TNARETIE 117 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHH
Confidence 36677877777 5677999998872 223333344555566666666544 5899887532 45688999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL 156 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l 156 (287)
+++.+++.|+|++.+..-.... .+...-+++++.|.+++++||+ +| |---+++.+.++.
T Consensus 118 la~~A~~~Gadavlv~~P~Y~~---~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINPYYWK---VSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHTCSEEEEECCSSSC---CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 9999999999999776332211 0011224667788888899976 44 3335788887776
No 302
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.71 E-value=0.072 Score=45.63 Aligned_cols=117 Identities=16% Similarity=0.213 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC-C----Chhh
Q 023070 18 NDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF-P----NLQD 91 (287)
Q Consensus 18 ~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g-~----~~~~ 91 (287)
++++.+.+.|+.. +.|+.+|.++ . .+-++++++.+++||.-..+.. . -...
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~ 89 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIE-------------------G----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITP 89 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEE-------------------S----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC
T ss_pred CCcchHHHHHHHHHHCCCcEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCc
Confidence 3488899988865 4589999874 1 3457888999999986433321 0 1112
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+.+-++.+.++|+|.|.+-...... + ..--++++.+++ .++++++ ++.|.+++.++.+ .|+|.|.+
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~----p-~~l~~~i~~~~~-~g~~v~~--~v~t~eea~~a~~-~Gad~Ig~ 155 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSR----P-VDIDSLLTRIRL-HGLLAMA--DCSTVNEGISCHQ-KGIEFIGT 155 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCC----S-SCHHHHHHHHHH-TTCEEEE--ECSSHHHHHHHHH-TTCSEEEC
T ss_pred cHHHHHHHHHcCCCEEEECccccCC----h-HHHHHHHHHHHH-CCCEEEE--ecCCHHHHHHHHh-CCCCEEEe
Confidence 3344667789999999775432210 0 112356666665 4666665 6899999999887 59999964
No 303
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.70 E-value=0.057 Score=48.14 Aligned_cols=133 Identities=17% Similarity=0.131 Sum_probs=87.2
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEEEEecCCCChhhHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~vKiR~g~~~~~~~ 93 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ai 93 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVG----------TTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHEAV 93 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHHHH
Confidence 37778888777 5678999998872 223333334555566666665544 478888742 24678999
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHHh-cCccEE
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEE-TGCEGV 164 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~~-~gad~V 164 (287)
++++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+. ..+-||
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 168 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNK---PTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGV 168 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEE
Confidence 99999999999999876432211 0001234677888888899986 44 445678888877765 344333
No 304
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.69 E-value=0.035 Score=50.34 Aligned_cols=131 Identities=17% Similarity=0.085 Sum_probs=85.9
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~l 121 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILG----------STGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA-LRTDEAVAL 121 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHH
Confidence 6677777777 4567999998872 233333345555566777666554 4899887643 456889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHHHHhcCccE
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKCLEETGCEG 163 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~l~~~gad~ 163 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| .|+ -+++.+.++.+...+-|
T Consensus 122 a~~A~~~Gadavlv~~P~Y~~---~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvg 192 (332)
T 2r8w_A 122 AKDAEAAGADALLLAPVSYTP---LTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRA 192 (332)
T ss_dssp HHHHHHHTCSEEEECCCCSSC---CCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEE
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEE
Confidence 999999999999775332211 0001224667888888899986 45 243 57888887765333333
No 305
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.69 E-value=0.029 Score=50.00 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=89.3
Q ss_pred CCCEEEEec---CCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCccc---ccccCChHHHHHHHHHHhhc-c--CC
Q 023070 8 DRPLFVQFC---ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYG---AFLMDNLPLVKSLVEKLALN-L--NV 77 (287)
Q Consensus 8 ~~p~~~Qi~---g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G---~~l~~~~~~~~~iv~~v~~~-~--~~ 77 (287)
+.|+++-+= | +++...+.++ +++.|+.+|.|--+... .+.++.| ..|. ..+...+-|++++++ . ++
T Consensus 79 ~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iED~~~~--k~cgH~gg~~k~l~-p~~e~~~rI~Aa~~a~~~~~~ 154 (295)
T 1s2w_A 79 DVPILLDADTGYG-NFNNARRLVRKLEDRGVAGACLEDKLFP--KTNSLHDGRAQPLA-DIEEFALKIKACKDSQTDPDF 154 (295)
T ss_dssp SSCEEEECCSSCS-SHHHHHHHHHHHHHTTCCEEEEECBCC----------CTTCCBC-CHHHHHHHHHHHHHHCSSTTC
T ss_pred CCCEEecCCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCCC--ccccccCCCCCccc-CHHHHHHHHHHHHHhcccCCc
Confidence 467776652 4 5677777776 55679999999865421 1223333 2333 333334444444433 2 34
Q ss_pred cEEEEecC---CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC--CcEEEecC---CCCH
Q 023070 78 PVSCKIRV---FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANGN---VRHM 149 (287)
Q Consensus 78 pv~vKiR~---g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~--ipVi~nGg---I~s~ 149 (287)
-|..|.-. +...+++++=++.++++|+|.|.+++.. .+.+.++++.+.++ +|+++|-+ -.+
T Consensus 155 ~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----------~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~- 223 (295)
T 1s2w_A 155 CIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK----------ADPSDIEAFMKAWNNQGPVVIVPTKYYKTP- 223 (295)
T ss_dssp EEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS----------SSSHHHHHHHHHHTTCSCEEECCSTTTTSC-
T ss_pred EEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC----------CCHHHHHHHHHHcCCCCCEEEeCCCCCCCC-
Confidence 45555432 2235788888999999999999998532 23466788888876 99999843 333
Q ss_pred HHHHHHHHhcCccEEEEehhhh
Q 023070 150 EDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 150 ~da~~~l~~~gad~VmiGR~~l 171 (287)
+.++- +.|+..|.+|-.++
T Consensus 224 --~~eL~-~lGv~~v~~~~~~~ 242 (295)
T 1s2w_A 224 --TDHFR-DMGVSMVIWANHNL 242 (295)
T ss_dssp --HHHHH-HHTCCEEEECSHHH
T ss_pred --HHHHH-HcCCcEEEEChHHH
Confidence 33444 46999999986654
No 306
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.67 E-value=0.015 Score=51.01 Aligned_cols=109 Identities=19% Similarity=0.292 Sum_probs=69.4
Q ss_pred cccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEE-ecc--CCCCcCCCCccccHHHHH
Q 023070 54 GAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV-HGR--TRDEKDGKKFRADWNAIK 130 (287)
Q Consensus 54 G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~v-h~r--t~~~~~~~~~~~~~~~i~ 130 (287)
|+..+.+..++.+ +.+ .+.||.+|.....+.++....++.+...|...+++ |-. +.. .+ .....|+..+.
T Consensus 113 ga~~~~n~~ll~~----~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~-~y-~~~~v~L~ai~ 185 (262)
T 1zco_A 113 GARNSQNFELLKE----VGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFE-TA-TRFTLDISAVP 185 (262)
T ss_dssp CGGGTTCHHHHHH----HTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSC-CS-SSSBCCTTHHH
T ss_pred CcccccCHHHHHH----HHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC-Cc-ChhhcCHHHHH
Confidence 3444444444333 333 68999999776667888888899999999865555 522 222 12 12246778889
Q ss_pred HHHhhCCCcEEEe----cCCCC--HHHHHHHHHhcCccEEEEehhh
Q 023070 131 AVKNALRIPVLAN----GNVRH--MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 131 ~i~~~~~ipVi~n----GgI~s--~~da~~~l~~~gad~VmiGR~~ 170 (287)
.+++..++||++. +|.+. +.-+..... .|++|+||=+-+
T Consensus 186 ~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva-~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 186 VVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYA-IGADGIMVEVHP 230 (262)
T ss_dssp HHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHH-TTCSEEEEEBCS
T ss_pred HHHhhhCCCEEEEcCCCCCccchHHHHHHHHHH-cCCCEEEEEecC
Confidence 9998888998653 23322 122344554 699999997654
No 307
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.66 E-value=0.048 Score=49.03 Aligned_cols=123 Identities=16% Similarity=0.098 Sum_probs=81.9
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..+++++
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ai~l 111 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLG----------STGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAKTVRR 111 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 6677777777 5678999998872 223333334555566666665544 589988753 2466889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKC 155 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~ 155 (287)
++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++
T Consensus 112 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 112 AQFAESLGAEAVMVLPISYWK---LNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHHHTTCSEEEECCCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 999999999999886432211 0011234677888888899986 44 434567777777
No 308
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.66 E-value=0.0042 Score=54.85 Aligned_cols=79 Identities=23% Similarity=0.354 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.+..++|+.+++.|+++|.|..-.. + + .-.++.++.+++.+++||+..+.|.++.++.++.. .|||+|.++-+
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~---~-f--~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~-~GAD~VlLi~a 144 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQR---R-F--QGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARA-HGADMLLLIVA 144 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGG---G-H--HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHH-TTCSEEEEEGG
T ss_pred CCHHHHHHHHHHcCCCEEEEecChh---h-c--CCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHH-cCCCEEEEecc
Confidence 4678999999999999998862111 0 1 12357888899999999999999999989999987 69999999988
Q ss_pred hhhCcc
Q 023070 170 LLENPA 175 (287)
Q Consensus 170 ~l~nP~ 175 (287)
.+.+..
T Consensus 145 ~l~~~~ 150 (272)
T 3qja_A 145 ALEQSV 150 (272)
T ss_dssp GSCHHH
T ss_pred cCCHHH
Confidence 776544
No 309
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.66 E-value=0.027 Score=50.48 Aligned_cols=145 Identities=14% Similarity=0.157 Sum_probs=86.6
Q ss_pred CCCEEEEe---cCCCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccc-cccCChHHHHHHHHHHhhc---cCCcE
Q 023070 8 DRPLFVQF---CANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGA-FLMDNLPLVKSLVEKLALN---LNVPV 79 (287)
Q Consensus 8 ~~p~~~Qi---~g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~-~l~~~~~~~~~iv~~v~~~---~~~pv 79 (287)
..|+++-+ +| +|+...+.++. .+.|+.+|.|--.... .+.++.++ .|....+.+.+| ++.+++ .+.++
T Consensus 88 ~~PviaD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~~--k~cgh~~gk~l~~~~e~~~rI-~Aa~~A~~~~~~d~ 163 (307)
T 3lye_A 88 GPPLIADMDTGYG-GPIMVARTVEHYIRSGVAGAHLEDQILT--KRCGHLSGKKVVSRDEYLVRI-RAAVATKRRLRSDF 163 (307)
T ss_dssp SCCEEEECTTCSS-SHHHHHHHHHHHHHTTCCEEEECCBCCC--C--------CBCCHHHHHHHH-HHHHHHHHHTTCCC
T ss_pred CCcEEEECCCCCC-CHHHHHHHHHHHHHcCCeEEEEcCCCCC--cccCCCCCCeecCHHHHHHHH-HHHHHHHHhcCCCe
Confidence 46887655 34 68888888874 5679999999744321 11222233 344333444444 333332 24455
Q ss_pred EEEecCC----CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-CcEEEe---cC---CCC
Q 023070 80 SCKIRVF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLAN---GN---VRH 148 (287)
Q Consensus 80 ~vKiR~g----~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-ipVi~n---Gg---I~s 148 (287)
.|--|.. ...+++++=++.+.++|+|.|-+++. .+.+.++++.+.++ +||.+| || ..+
T Consensus 164 ~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~-----------~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t 232 (307)
T 3lye_A 164 VLIARTDALQSLGYEECIERLRAARDEGADVGLLEGF-----------RSKEQAAAAVAALAPWPLLLNSVENGHSPLIT 232 (307)
T ss_dssp EEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC-----------SCHHHHHHHHHHHTTSCBEEEEETTSSSCCCC
T ss_pred EEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC-----------CCHHHHHHHHHHccCCceeEEeecCCCCCCCC
Confidence 5544442 24568888889999999999999864 23466778887764 888765 33 234
Q ss_pred HHHHHHHHHhcCccEEEEehhhh
Q 023070 149 MEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 149 ~~da~~~l~~~gad~VmiGR~~l 171 (287)
.++ +- +.|+..|+.+-.++
T Consensus 233 ~~e---L~-~lGv~~v~~~~~~~ 251 (307)
T 3lye_A 233 VEE---AK-AMGFRIMIFSFATL 251 (307)
T ss_dssp HHH---HH-HHTCSEEEEETTTH
T ss_pred HHH---HH-HcCCeEEEEChHHH
Confidence 333 33 46999998876554
No 310
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.62 E-value=0.014 Score=53.21 Aligned_cols=110 Identities=18% Similarity=0.302 Sum_probs=71.2
Q ss_pred cccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEE--eccCCCCcCCCCccccHHHHHH
Q 023070 54 GAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFRADWNAIKA 131 (287)
Q Consensus 54 G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~v--h~rt~~~~~~~~~~~~~~~i~~ 131 (287)
||..+.+.+++.++ . ..+.||.+|.....+.++....++.+...|..-+++ +|.+.-+.+. ....|+..+..
T Consensus 196 gAr~~~n~~LL~~v----a-~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~-~~~vdl~ai~~ 269 (350)
T 1vr6_A 196 GARNAQNFRLLSKA----G-SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKAT-RNTLDISAVPI 269 (350)
T ss_dssp CGGGTTCHHHHHHH----H-TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS-SSBCCTTHHHH
T ss_pred CcccccCHHHHHHH----H-ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcC-hhhhhHHHHHH
Confidence 44445555544433 3 358999999776667788888888889999866655 3332111111 23578888899
Q ss_pred HHhhCCCcEEE-ec---CCCC--HHHHHHHHHhcCccEEEEehhh
Q 023070 132 VKNALRIPVLA-NG---NVRH--MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 132 i~~~~~ipVi~-nG---gI~s--~~da~~~l~~~gad~VmiGR~~ 170 (287)
+++..++||++ +. |-++ ..-+..++. .||||+||=+-+
T Consensus 270 lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA-~GA~Gl~IE~H~ 313 (350)
T 1vr6_A 270 IRKESHLPILVDPSHSGGRRDLVIPLSRAAIA-VGAHGIIVEVHP 313 (350)
T ss_dssp HHHHBSSCEEECHHHHHCSGGGHHHHHHHHHH-HTCSEEEEEBCS
T ss_pred HHHhhCCCEEEeCCCCCcccchHHHHHHHHHH-hCCCEEEEEecC
Confidence 99888899976 22 4332 344445555 599999997654
No 311
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=96.60 E-value=0.025 Score=50.41 Aligned_cols=111 Identities=20% Similarity=0.249 Sum_probs=72.9
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCC-ccccHHHHH
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIK 130 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~-~~~~~~~i~ 130 (287)
.-||..+.+.+++.+ +. ..+.||.+|....-+.++....++.+...|...+++.-|... +.++ ...|+..+.
T Consensus 113 kIgA~~~~n~~Ll~~----~a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~--~~y~~~~~dl~~i~ 185 (292)
T 1o60_A 113 QLPAFLARQTDLVEA----MA-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTN--FGYDNLIVDMLGFS 185 (292)
T ss_dssp EECGGGTTCHHHHHH----HH-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE--CSTTCEECCTTHHH
T ss_pred EECcccccCHHHHHH----HH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCccccCHHHHH
Confidence 346777777775444 43 468999999776557788888888999999866655434322 1221 125888888
Q ss_pred HHHhhC-CCcEEEe---------------cCCCC--HHHHHHHHHhcCccEEEEehhh
Q 023070 131 AVKNAL-RIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 131 ~i~~~~-~ipVi~n---------------GgI~s--~~da~~~l~~~gad~VmiGR~~ 170 (287)
.+++.. ++||++. +|.+. ..-+..+.. .|+||+||=+-+
T Consensus 186 ~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva-~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 186 VMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLA-VGIAGLFLEAHP 242 (292)
T ss_dssp HHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHH-HCCSEEEEEEES
T ss_pred HHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHH-cCCCEEEEEecC
Confidence 898887 8999982 23211 123334454 699999997654
No 312
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.60 E-value=0.053 Score=48.16 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=81.6
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 89 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNG----------TTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKSIQA 89 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHH
Confidence 6677777777 5678999998872 223333334444456666665544 589988753 2466889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++.+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 90 a~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 90 SIQAKALGADAIMLITPYYNK---TNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 999999999999776332211 0001224667778887889976 44 44467777777665
No 313
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.59 E-value=0.05 Score=48.89 Aligned_cols=125 Identities=10% Similarity=0.105 Sum_probs=82.7
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~eai~l 110 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVG----------TTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA-NSTREAVAL 110 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHHH
Confidence 6677777777 4567999998872 223333334555566666665544 4899887432 456889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 111 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 111 TEAAKSGGADACLLVTPYYNK---PTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK 175 (314)
T ss_dssp HHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 999999999999776432211 0001224677888888899986 44 44567788777764
No 314
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.58 E-value=0.014 Score=53.63 Aligned_cols=97 Identities=18% Similarity=0.289 Sum_probs=68.2
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CC
Q 023070 60 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 138 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~i 138 (287)
+++...+.++.+++.-.++|.+-+ +.. .+..+.++.+.++|++.|.++.-. +. .....+.++++++.. ++
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~v--g~~-~~~~~~~~~lieaGvd~I~idta~-----G~-~~~~~~~I~~ik~~~p~v 150 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAV--GAA-PGNEERVKALVEAGVDVLLIDSSH-----GH-SEGVLQRIRETRAAYPHL 150 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEEC--CSC-TTCHHHHHHHHHTTCSEEEEECSC-----TT-SHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHhcCceeEEEEe--ccC-hhHHHHHHHHHhCCCCEEEEeCCC-----CC-CHHHHHHHHHHHHhcCCC
Confidence 577778888888765344444443 222 234567888999999999886211 11 022346788888876 78
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 139 PVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 139 pVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
||++ |.+.|++++.++.+ .|||+|.+|
T Consensus 151 ~Vi~-G~v~t~e~A~~a~~-aGAD~I~vG 177 (366)
T 4fo4_A 151 EIIG-GNVATAEGARALIE-AGVSAVKVG 177 (366)
T ss_dssp EEEE-EEECSHHHHHHHHH-HTCSEEEEC
T ss_pred ceEe-eeeCCHHHHHHHHH-cCCCEEEEe
Confidence 8876 77999999999887 599999995
No 315
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.54 E-value=0.045 Score=49.54 Aligned_cols=134 Identities=17% Similarity=0.119 Sum_probs=77.0
Q ss_pred HHcCCCCEEEEeccCChhhhhcCccccccc-----CChHHHHHHHHHHhhccCCcEEEEe--cC---CCC---------h
Q 023070 29 RVEPYCDYVDINLGCPQRIARRGNYGAFLM-----DNLPLVKSLVEKLALNLNVPVSCKI--RV---FPN---------L 89 (287)
Q Consensus 29 ~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~-----~~~~~~~~iv~~v~~~~~~pv~vKi--R~---g~~---------~ 89 (287)
+++.|+|+|-+.+- ||+.=. .....+.++.++.+ ..++|+.+=+ +. +.. .
T Consensus 119 a~~~GADAVk~lv~----------~g~d~~~e~~~~q~~~l~rv~~ec~-~~GiPlllEil~y~~~~~~~~~~~~a~~~p 187 (332)
T 3iv3_A 119 LKEAGADAVKFLLY----------YDVDGDPQVNVQKQAYIERIGSECQ-AEDIPFFLEILTYDETISNNSSVEFAKVKV 187 (332)
T ss_dssp HHHTTCSEEEEEEE----------ECTTSCHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECBTTBSCTTSHHHHTTHH
T ss_pred HHHcCCCEEEEEEE----------cCCCchHHHHHHHHHHHHHHHHHHH-HcCCceEEEEeccCCCCCCCcchhhhccCH
Confidence 45679999888752 333100 01223444444432 3489988744 22 111 1
Q ss_pred hhHHHHHHHH--HHcCCCEEEEe-ccCCC---Cc----CCCCccccHHHHHHHHhhCCCcEE-EecCCCCHHHHHHHHHh
Q 023070 90 QDTIKYAKML--EDAGCSLLAVH-GRTRD---EK----DGKKFRADWNAIKAVKNALRIPVL-ANGNVRHMEDVQKCLEE 158 (287)
Q Consensus 90 ~~~~~~a~~l--~~~G~~~I~vh-~rt~~---~~----~~~~~~~~~~~i~~i~~~~~ipVi-~nGgI~s~~da~~~l~~ 158 (287)
+.....++.+ .+.|+|.+-+- ..... +. ..|+.....+.++++.+.+++|+| .+||+ +.++..+.++.
T Consensus 188 ~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~~ 266 (332)
T 3iv3_A 188 HKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLVF 266 (332)
T ss_dssp HHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHHH
Confidence 1245667777 57799999774 11110 10 011111122457777788899965 79998 56666665532
Q ss_pred ---cCc--cEEEEehhhhhCc
Q 023070 159 ---TGC--EGVLSAESLLENP 174 (287)
Q Consensus 159 ---~ga--d~VmiGR~~l~nP 174 (287)
.|+ .||.+||....+.
T Consensus 267 A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 267 AHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHTCCCCEEEECHHHHTTH
T ss_pred HHHcCCCcceEEeeHHHHHhh
Confidence 588 9999999987763
No 316
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.53 E-value=0.052 Score=48.48 Aligned_cols=132 Identities=11% Similarity=0.172 Sum_probs=85.4
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~l 98 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGG----------STGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC-VSTAESQQL 98 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECe----------eccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHH
Confidence 6677777777 5678999999872 223333344555566666666544 5889887532 356789999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-CcEE-Ee----cCC-CCHHHHHHHHHhcCccEE
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVL-AN----GNV-RHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-ipVi-~n----GgI-~s~~da~~~l~~~gad~V 164 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.++++ +||+ +| .|+ -+++.+.++.+...+-||
T Consensus 99 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 171 (303)
T 2wkj_A 99 AASAKRYGFDAVSAVTPFYYP---FSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGAL 171 (303)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEE
T ss_pred HHHHHhCCCCEEEecCCCCCC---CCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 999999999999776332211 000122466778888888 9986 45 344 578888877653333333
No 317
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=96.53 E-value=0.031 Score=52.95 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=89.0
Q ss_pred CHHHHHHHHH-HHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 95 (287)
+|++.++.++ ... .||+.+.|..|.+ +++.-.+.++++++.+ ++++.+...-+|+.++++++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~wt~~~Ai~~ 266 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAWSLDEAVKI 266 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCccCHHHHHHH
Confidence 5666666554 343 4999999986521 3344456677777766 67888888889999999999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCC-CCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDG-KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~-~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++.+++. +.++ ++.-. .......+.++++++.+++||.+.-.+.+..++.++++...+|.++.
T Consensus 267 ~~~le~~-l~wi-------EeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~ 330 (464)
T 4g8t_A 267 GKQLKGV-LAYA-------EDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLA 330 (464)
T ss_dssp HHHTTTT-CSCE-------ESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBC
T ss_pred HHHhhhc-ccee-------ecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEec
Confidence 9998765 5544 11100 00012357788999999999999999999999999999877885543
No 318
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.52 E-value=0.16 Score=44.81 Aligned_cols=138 Identities=14% Similarity=0.162 Sum_probs=93.6
Q ss_pred CCC-EEEEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 023070 8 DRP-LFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIR 84 (287)
Q Consensus 8 ~~p-~~~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR 84 (287)
.+| +.|.|.+.+.+++...++.+. .|+|.||+=.-+ +.. ..+.+.+.+.+..+++.. ++|+.+=+|
T Consensus 38 g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~---------l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 38 GAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDH---------FAN--VTTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGG---------CTT--TTCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEecc---------ccc--cCcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 455 569999999999999888776 699999996421 111 123477888999998887 799999888
Q ss_pred C----CC---ChhhHHHHHHHHHHcC-CCEEEEeccCCCCcCCCCccccHHHHHHHH---hhCCCcEEEec----CCCCH
Q 023070 85 V----FP---NLQDTIKYAKMLEDAG-CSLLAVHGRTRDEKDGKKFRADWNAIKAVK---NALRIPVLANG----NVRHM 149 (287)
Q Consensus 85 ~----g~---~~~~~~~~a~~l~~~G-~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~---~~~~ipVi~nG----gI~s~ 149 (287)
. |. +.++..++.+.+.+.| +++|.|--.. +-+.++++. ...++.||++= +--+.
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~-----------~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~ 175 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT-----------GDDEVKATVGYAHQHNVAVIMSNHDFHKTPAA 175 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG-----------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCH
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC-----------CHHHHHHHHHHHHhCCCEEEEEeecCCCCcCH
Confidence 7 21 3456678888888899 9999996321 113344443 23467888763 33444
Q ss_pred HHHHHHHH---hcCccEEEEe
Q 023070 150 EDVQKCLE---ETGCEGVLSA 167 (287)
Q Consensus 150 ~da~~~l~---~~gad~VmiG 167 (287)
+++...++ ..|||.|=++
T Consensus 176 ~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 176 EEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEE
Confidence 55554443 3588877554
No 319
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.51 E-value=0.0062 Score=54.11 Aligned_cols=94 Identities=13% Similarity=0.181 Sum_probs=60.3
Q ss_pred HHHHHHHhhccC--CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccH-HHHHHHHh-hCCCcE
Q 023070 65 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKN-ALRIPV 140 (287)
Q Consensus 65 ~~iv~~v~~~~~--~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~-~~i~~i~~-~~~ipV 140 (287)
.+.++++++... .+|.|-++ + .+-++.+.++|+|+|-++..+ +.++ +.++.++. ..++|+
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~---t----leea~eA~~aGaD~I~LDn~~---------~e~l~~av~~l~~~~~~v~i 243 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE---N----LEDALRAVEAGADIVMLDNLS---------PEEVKDISRRIKDINPNVIV 243 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES---S----HHHHHHHHHTTCSEEEEESCC---------HHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHhCCCCceEEEEeC---C----HHHHHHHHHcCCCEEEECCCC---------HHHHHHHHHHhhccCCCceE
Confidence 445566665542 45555432 2 234555667999999998532 1222 22333332 126899
Q ss_pred EEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 141 LANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 141 i~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
.++||| +++.+.++.+ +|+|++.+|.....-|++
T Consensus 244 eASGGI-t~eni~~~a~-tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 244 EVSGGI-TEENVSLYDF-ETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp EEEECC-CTTTGGGGCC-TTCCEEEEGGGTSSCCCC
T ss_pred EEECCC-CHHHHHHHHH-cCCCEEEEeHHHcCCCCc
Confidence 999999 5688887776 799999999987766653
No 320
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.50 E-value=0.064 Score=47.92 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=82.1
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ai~ 102 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAG----------TTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTSVE 102 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHHHH
Confidence 36777877777 5677999998872 223333334455566666665544 488888753 246688999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~l~ 157 (287)
+++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| -|+ -+++.+.++.+
T Consensus 103 la~~A~~~Gadavlv~~P~y~~---~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (304)
T 3cpr_A 103 LAEAAASAGADGLLVVTPYYSK---PSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSE 168 (304)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 9999999999999775322111 0001224667788888899976 45 243 57787777654
No 321
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.50 E-value=0.067 Score=44.64 Aligned_cols=122 Identities=17% Similarity=0.162 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc-cCCcEEEEecCCCChhhHHHHH
Q 023070 18 NDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-LNVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 18 ~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~-~~~pv~vKiR~g~~~~~~~~~a 96 (287)
.+.++..+.++.+..|+|.|++.+ |.. .. +| .++++++++. .++||.+-.-.... ...++
T Consensus 10 ~~~~~~~~~~~~~~~~~diie~G~--p~~--~~--~g----------~~~i~~ir~~~~~~~i~~~~~~~~~---~~~~~ 70 (211)
T 3f4w_A 10 LTLPEAMVFMDKVVDDVDIIEVGT--PFL--IR--EG----------VNAIKAIKEKYPHKEVLADAKIMDG---GHFES 70 (211)
T ss_dssp CCHHHHHHHHHHHGGGCSEEEECH--HHH--HH--HT----------THHHHHHHHHCTTSEEEEEEEECSC---HHHHH
T ss_pred CCHHHHHHHHHHhhcCccEEEeCc--HHH--Hh--cc----------HHHHHHHHHhCCCCEEEEEEEeccc---hHHHH
Confidence 466777777765555788888875 442 11 12 3567777776 47887543222211 12358
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccH-HHHHHHHhhCCCcEEEe-cCCCCH-HHHHHHHHhcCccEEEEeh
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNALRIPVLAN-GNVRHM-EDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~-~~i~~i~~~~~ipVi~n-GgI~s~-~da~~~l~~~gad~VmiGR 168 (287)
+.+.++|++++++|.... ..++ +.++.+++ .+++++.. =+..++ +.+..+.+ .|+|.|.+..
T Consensus 71 ~~~~~~Gad~v~v~~~~~--------~~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~-~g~d~i~v~~ 135 (211)
T 3f4w_A 71 QLLFDAGADYVTVLGVTD--------VLTIQSCIRAAKE-AGKQVVVDMICVDDLPARVRLLEE-AGADMLAVHT 135 (211)
T ss_dssp HHHHHTTCSEEEEETTSC--------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHH-HTCCEEEEEC
T ss_pred HHHHhcCCCEEEEeCCCC--------hhHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHH-cCCCEEEEcC
Confidence 888999999999996531 1222 33444444 36666542 335565 44666666 6999987753
No 322
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=96.49 E-value=0.019 Score=50.57 Aligned_cols=93 Identities=13% Similarity=0.191 Sum_probs=60.7
Q ss_pred HHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHH
Q 023070 21 EILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKML 99 (287)
Q Consensus 21 ~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l 99 (287)
+...+-|+ .++.|+|.||||++++ ....++.+..+++++++.+++|+++... + .+.++..
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~~~~pisIDT~------~-~~v~~aa 94 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEVVDLPCCLDST------N-PDAIEAG 94 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHHCCCCEEEECS------C-HHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHhCCCeEEEeCC------C-HHHHHHH
Confidence 33444333 6678999999997652 2356888999999999888999999832 1 2345555
Q ss_pred HHc--CCCEEE-EeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE
Q 023070 100 EDA--GCSLLA-VHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 142 (287)
Q Consensus 100 ~~~--G~~~I~-vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~ 142 (287)
.++ |++.|- |++.. .+++.+..+....+.||++
T Consensus 95 l~a~~Ga~iINdvs~~~----------d~~~~~~~~~a~~~~~vv~ 130 (271)
T 2yci_X 95 LKVHRGHAMINSTSADQ----------WKMDIFFPMAKKYEAAIIG 130 (271)
T ss_dssp HHHCCSCCEEEEECSCH----------HHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCEEEECCCCc----------cccHHHHHHHHHcCCCEEE
Confidence 556 888873 65431 1133344444455778876
No 323
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.49 E-value=0.014 Score=50.99 Aligned_cols=139 Identities=17% Similarity=0.125 Sum_probs=87.3
Q ss_pred CCEEEEe---cCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc---CCcEEEE
Q 023070 9 RPLFVQF---CANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCK 82 (287)
Q Consensus 9 ~p~~~Qi---~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~---~~pv~vK 82 (287)
.|+++-+ +|+++ +..+.++++.|+++|.|--+...+ |..+ -..+...+-|++++++. ++|+.|-
T Consensus 81 ~pviaD~~~Gyg~~~--~~~~~~l~~aGa~gv~iEd~~~~~-------~k~l-~~~~e~~~~I~a~~~a~~~~g~~~~v~ 150 (255)
T 2qiw_A 81 IPVSVDVESGYGLSP--ADLIAQILEAGAVGINVEDVVHSE-------GKRV-REAQEHADYIAAARQAADVAGVDVVIN 150 (255)
T ss_dssp SCEEEECTTCTTCCH--HHHHHHHHHTTCCEEEECSEEGGG-------TTEE-CCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCEEeccCCCcCcHH--HHHHHHHHHcCCcEEEECCCCCCC-------CCcc-cCHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 5666544 34556 444555677899999997443110 2222 24455566666665542 5775544
Q ss_pred ecCC-----CC-----hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe--cCCCCH-
Q 023070 83 IRVF-----PN-----LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN--GNVRHM- 149 (287)
Q Consensus 83 iR~g-----~~-----~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n--GgI~s~- 149 (287)
-|.. .+ .+++++=++.++++|++.|.+++. .+.+.++++.+.+++|+..+ ++-.++
T Consensus 151 aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~n~~~~~~~~~p~ 219 (255)
T 2qiw_A 151 GRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL-----------STAEQVERLVDAVSVPVNITAHPVDGHGA 219 (255)
T ss_dssp EEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC-----------CSHHHHHHHHTTCSSCBEEECBTTTBBTT
T ss_pred EEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC-----------CCHHHHHHHHHhCCCCEEEEecCCCCCCC
Confidence 4442 22 467788889999999999999754 33467889999999998766 333111
Q ss_pred HHHHHHHHhcCccEEEEehh
Q 023070 150 EDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 150 ~da~~~l~~~gad~VmiGR~ 169 (287)
-++.++- +.|+..|..|-.
T Consensus 220 ~~~~eL~-~lGv~~v~~~~~ 238 (255)
T 2qiw_A 220 GDLATLA-GLGVRRVTFGPL 238 (255)
T ss_dssp BCHHHHH-HTTCCEEECTTH
T ss_pred CCHHHHH-HcCCCEEEEHHH
Confidence 1233333 469999998865
No 324
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.48 E-value=0.025 Score=48.69 Aligned_cols=99 Identities=22% Similarity=0.255 Sum_probs=73.9
Q ss_pred HHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecC
Q 023070 66 SLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 145 (287)
Q Consensus 66 ~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGg 145 (287)
++++.+.+. +|..=+|. .+.+++.++++.+.+.|++.|-|+-++. ...+.|+++++.++-.+++.|.
T Consensus 26 ~~~~~l~~~---~vv~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t~---------~a~e~I~~l~~~~~~~~iGaGT 92 (232)
T 4e38_A 26 TINNQLKAL---KVIPVIAI-DNAEDIIPLGKVLAENGLPAAEITFRSD---------AAVEAIRLLRQAQPEMLIGAGT 92 (232)
T ss_dssp HHHHHHHHH---CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHhC---CEEEEEEc-CCHHHHHHHHHHHHHCCCCEEEEeCCCC---------CHHHHHHHHHHhCCCCEEeECC
Confidence 345555443 33333333 4568899999999999999999986643 2358899999887667899999
Q ss_pred CCCHHHHHHHHHhcCccEEEEehhhhhCccchhchh
Q 023070 146 VRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 146 I~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
|.+.++++.+++ .|||+|+..- .+|.+.+..+
T Consensus 93 Vlt~~~a~~Ai~-AGA~fIvsP~---~~~~vi~~~~ 124 (232)
T 4e38_A 93 ILNGEQALAAKE-AGATFVVSPG---FNPNTVRACQ 124 (232)
T ss_dssp CCSHHHHHHHHH-HTCSEEECSS---CCHHHHHHHH
T ss_pred cCCHHHHHHHHH-cCCCEEEeCC---CCHHHHHHHH
Confidence 999999999998 5999998753 4677665443
No 325
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.46 E-value=0.065 Score=47.59 Aligned_cols=127 Identities=11% Similarity=0.075 Sum_probs=83.9
Q ss_pred CCHHHHHHHHH-HHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHH
Q 023070 18 NDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~ 93 (287)
=|.+.+.+-++ .++ .|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+++
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai 89 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGG----------STGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS-VNLKEAV 89 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC-CCHHHHH
Confidence 36777888777 567 8999998872 223333345555566666666544 4888877532 3568899
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHHHHh
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKCLEE 158 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~l~~ 158 (287)
++++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| .|+ -+++.+.++.+.
T Consensus 90 ~la~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 157 (293)
T 1f6k_A 90 ELGKYATELGYDCLSAVTPFYYK---FSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKN 157 (293)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTS
T ss_pred HHHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcC
Confidence 99999999999999776332211 0001224667788888889976 45 344 578888877653
No 326
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=96.45 E-value=0.019 Score=50.82 Aligned_cols=112 Identities=18% Similarity=0.190 Sum_probs=71.2
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCC-ccccHHHHH
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIK 130 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~-~~~~~~~i~ 130 (287)
..||..+++.+++.++ . ..+.||.+|....-+.++....++.+...|...+++.-|+.. +.+. ...|+..+.
T Consensus 110 kIga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~--~~~~~~~~dl~~i~ 182 (280)
T 2qkf_A 110 QLPAFLARQTDLVVAM----A-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSS--FGYDNLVVDMLGFG 182 (280)
T ss_dssp EECGGGTTBHHHHHHH----H-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE--CSTTCEECCTTHHH
T ss_pred EECcccccCHHHHHHH----H-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCccccCHHHHH
Confidence 4567777777755443 2 468999999776557788888888899999866655434332 2221 125888888
Q ss_pred HHHhhC-CCcEEEe-----------cCCCC------HHHHHHHHHhcCccEEEEehhhh
Q 023070 131 AVKNAL-RIPVLAN-----------GNVRH------MEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 131 ~i~~~~-~ipVi~n-----------GgI~s------~~da~~~l~~~gad~VmiGR~~l 171 (287)
.+++.. ++||++. |+-.. ..-+..+.. .|+||+||=+-+-
T Consensus 183 ~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava-~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 183 VMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMA-TRLAGLFLESHPD 240 (280)
T ss_dssp HHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHT-TCCSEEEEEC---
T ss_pred HHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHH-cCCCEEEEeecCC
Confidence 998887 8999983 12111 122334444 6999999976543
No 327
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.44 E-value=0.008 Score=55.32 Aligned_cols=87 Identities=15% Similarity=0.187 Sum_probs=58.3
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccc---cH-HHHHHHHhhCCCcEEEecCC---CC
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA---DW-NAIKAVKNALRIPVLANGNV---RH 148 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~---~~-~~i~~i~~~~~ipVi~nGgI---~s 148 (287)
+.++..-+...... .+..+.++..|++++.+|-....+.....+.. +| +.++.+++.+++||++=| | .+
T Consensus 144 ~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s 219 (365)
T 3sr7_A 144 HLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMD 219 (365)
T ss_dssp -CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCC
T ss_pred CCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCC
Confidence 55665554443332 25566777899999999854321111111222 34 789999999999999874 6 79
Q ss_pred HHHHHHHHHhcCccEEEEe
Q 023070 149 MEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 149 ~~da~~~l~~~gad~VmiG 167 (287)
++++..+.+ .|+|+|.++
T Consensus 220 ~e~A~~l~~-aGad~I~V~ 237 (365)
T 3sr7_A 220 VKTIQTAID-LGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHH-HTCCEEECC
T ss_pred HHHHHHHHH-cCCCEEEEe
Confidence 999998887 699999873
No 328
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=96.42 E-value=0.03 Score=49.88 Aligned_cols=117 Identities=18% Similarity=0.243 Sum_probs=74.3
Q ss_pred HcCCCCEEE----EeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEE--e--cCC------CChhhHHHH
Q 023070 30 VEPYCDYVD----INLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK--I--RVF------PNLQDTIKY 95 (287)
Q Consensus 30 ~~~g~d~Id----iN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vK--i--R~g------~~~~~~~~~ 95 (287)
+..|+|+|- ||.|.|... ...+.+.+++++.. ..++|+.+= + |.| .+.+.....
T Consensus 138 vrlGADaV~~l~~i~~Gs~~e~-----------~~l~~la~vv~ea~-~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~a 205 (307)
T 3fok_A 138 VDRGVDFAKTLVRINLSDAGTA-----------PTLEATAHAVNEAA-AAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQS 205 (307)
T ss_dssp HHHTCCEEEEEEEECTTCTTHH-----------HHHHHHHHHHHHHH-HTTCCEEEEEEEEEEETTEEEECCSHHHHHHH
T ss_pred HHCCCCEEEEEEEECCCChhHH-----------HHHHHHHHHHHHHH-HcCCcEEEEeeccccCCCCcCCCCCHHHHHHH
Confidence 344888866 666666531 12344555555543 347887763 1 212 233444556
Q ss_pred HHHHHHcCCC----EEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCC--CHHHHHHHHHh----cCccEEE
Q 023070 96 AKMLEDAGCS----LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVR--HMEDVQKCLEE----TGCEGVL 165 (287)
Q Consensus 96 a~~l~~~G~~----~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~--s~~da~~~l~~----~gad~Vm 165 (287)
++...+.|+| .|-+- + + +.++++.+.+.+||+..||=. +.+++.+..+. .|+.|+.
T Consensus 206 aRiAaELGADs~~tivK~~---------y--~---e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 206 VAIAAGLGNDSSYTWMKLP---------V--V---EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp HHHHHTCSSCCSSEEEEEE---------C--C---TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHhCCCcCCCEEEeC---------C--c---HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 6777899999 77662 1 1 236788888899998888765 45666555432 4999999
Q ss_pred Eehhhhh
Q 023070 166 SAESLLE 172 (287)
Q Consensus 166 iGR~~l~ 172 (287)
+||-++.
T Consensus 272 vGRNIfQ 278 (307)
T 3fok_A 272 VGRTLLY 278 (307)
T ss_dssp ECTTTSS
T ss_pred echhhcc
Confidence 9998877
No 329
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.40 E-value=0.091 Score=46.64 Aligned_cols=126 Identities=14% Similarity=0.064 Sum_probs=85.3
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 89 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFG----------TTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDAAD 89 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHHHH
Confidence 36777877777 5677999999872 234344445566677777777665 4899887633 45688999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC---CCcEE-Ee----cCC-CCHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL---RIPVL-AN----GNV-RHMEDVQKCL 156 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~---~ipVi-~n----GgI-~s~~da~~~l 156 (287)
+++.+++.|+|++-+..-..... .+...-+++++.+.+++ ++||+ +| .|+ -+++.+.++.
T Consensus 90 la~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 90 QSAEALNAGARNILLAPPSYFKN--VSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp HHHHHHHTTCSEEEECCCCSSCS--CCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCcCCCC--CCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 99999999999998763322110 01112246677888887 89986 45 243 5788888777
No 330
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=96.39 E-value=0.041 Score=48.72 Aligned_cols=110 Identities=18% Similarity=0.238 Sum_probs=72.9
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc-cccHHHHH
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIK 130 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~-~~~~~~i~ 130 (287)
..|+..+.+.+++.+ +. ..+.||.+|-....+.++....++.+.+.|.+-|++.-|+.. +.+.. ..|+..+.
T Consensus 115 qIgA~~~~n~~LLr~----va-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~--y~~~~~~vdl~~i~ 187 (285)
T 3sz8_A 115 QVPAFLARQTDLVVA----IA-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSS--FGYDNLVVDMLGFR 187 (285)
T ss_dssp EECGGGTTCHHHHHH----HH-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEE--CSSSCEECCTTHHH
T ss_pred EECccccCCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCC--CCCCcCccCHHHHH
Confidence 456777777775554 33 368999999766557778888888899999877766433332 12211 26888899
Q ss_pred HHHhhC-CCcEEEe---------------cCCCC--HHHHHHHHHhcCccEEEEehh
Q 023070 131 AVKNAL-RIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 131 ~i~~~~-~ipVi~n---------------GgI~s--~~da~~~l~~~gad~VmiGR~ 169 (287)
.+++.. ++||++. ||-+. +.-+..++. .||||++|=+-
T Consensus 188 ~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA-~GA~gl~IE~H 243 (285)
T 3sz8_A 188 QMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIA-VGIAGLFLEAH 243 (285)
T ss_dssp HHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHH-HCCSEEEEEEE
T ss_pred HHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHH-hCCCEEEEEec
Confidence 999988 5999984 23221 223445555 59999998654
No 331
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.38 E-value=0.047 Score=48.49 Aligned_cols=126 Identities=13% Similarity=0.008 Sum_probs=82.8
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~ 87 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVG----------TTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGA-NATAEAIS 87 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHHHH
Confidence 36777888777 4567999998872 223333334555566666665544 4898887532 35678999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~l~ 157 (287)
+++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| .|+ -+++.+.++.+
T Consensus 88 la~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLTVTPYYNR---PSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp HHHHTTTSSCSEEEEECCCSSC---CCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 9999999999999776332211 0001224667788888899986 44 344 57888877764
No 332
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=96.37 E-value=0.049 Score=48.80 Aligned_cols=129 Identities=12% Similarity=0.060 Sum_probs=83.7
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 94 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILA----------NFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQVCAA 94 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHHHHH
Confidence 36777888777 5678999998872 223333344555566666666544 589998863 246688999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCCCCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNVRHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI~s~~da~~~l~ 157 (287)
+++.+++.|+|++-+..-........+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 95 la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 95 RSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 99999999999997753221000000111234667888888888876 44 44456777777764
No 333
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=96.37 E-value=0.05 Score=46.10 Aligned_cols=128 Identities=9% Similarity=0.102 Sum_probs=72.1
Q ss_pred CCEEEEec-CCCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 9 RPLFVQFC-ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 9 ~p~~~Qi~-g~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
.+++.=+= +.-|.....+++. ++.|+|.|.+|.. ++ .+.+..+++... ..-+.|-+-..
T Consensus 59 ~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~-----------~G-----~~~l~~~~~~~~---~~~~~V~~lts 119 (213)
T 1vqt_A 59 LKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSC-----------AG-----YESVERALSATD---KHVFVVVKLTS 119 (213)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGG-----------GC-----HHHHHHHHHHCS---SEEEEECCCTT
T ss_pred CCEEEEeecccCchHHHHHHHHHHHCCCCEEEEecc-----------CC-----HHHHHHHHHhcC---CCeEEEEEeCC
Confidence 45554442 3334555556654 4568999999942 22 122223322211 11122222112
Q ss_pred CC--h-hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHH---H------HHH
Q 023070 87 PN--L-QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHME---D------VQK 154 (287)
Q Consensus 87 ~~--~-~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~---d------a~~ 154 (287)
.+ . +.....++. .+.|++ ++..+ +.++.+++.++.| +..+||+--. | ..+
T Consensus 120 ~~~~l~~~v~~~a~~-~e~G~d-vV~~~---------------~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~ 181 (213)
T 1vqt_A 120 MEGSLEDYMDRIEKL-NKLGCD-FVLPG---------------PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE 181 (213)
T ss_dssp SCCCHHHHHHHHHHH-HHHTCE-EECCH---------------HHHHHHTTTCCSC-EEECCBC---------CCBCHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCE-EEEcH---------------HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH
Confidence 11 2 455667888 899998 43321 3467777777667 7788886432 1 456
Q ss_pred HHHhcCccEEEEehhhhhCcc
Q 023070 155 CLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~ 175 (287)
++ .|+|++.+||+++..++
T Consensus 182 -i~-aGad~iVvGR~I~~a~d 200 (213)
T 1vqt_A 182 -MK-GIANFAVLGREIYLSEN 200 (213)
T ss_dssp -HT-TTCSEEEESHHHHTSSC
T ss_pred -HH-CCCCEEEEChhhcCCCC
Confidence 66 69999999999997665
No 334
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.37 E-value=0.029 Score=51.88 Aligned_cols=110 Identities=17% Similarity=0.294 Sum_probs=71.6
Q ss_pred cccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEE-eccCCCCcCCCCccccHHHHHHH
Q 023070 54 GAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV-HGRTRDEKDGKKFRADWNAIKAV 132 (287)
Q Consensus 54 G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~v-h~rt~~~~~~~~~~~~~~~i~~i 132 (287)
||..+.+.++ ++++. ..+.||.+|...+.+.++....++.+.+.|..-|++ |..+..-........|+..+..+
T Consensus 232 gs~~~~n~~L----L~~~a-~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~l 306 (385)
T 3nvt_A 232 GARNMQNFEL----LKAAG-RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPIL 306 (385)
T ss_dssp CGGGTTCHHH----HHHHH-TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHH
T ss_pred CcccccCHHH----HHHHH-ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHH
Confidence 4445555543 44443 358999999877778889988899999999865544 53233211001124688889999
Q ss_pred HhhCCCcEEEe----cCCCCH--HHHHHHHHhcCccEEEEehh
Q 023070 133 KNALRIPVLAN----GNVRHM--EDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 133 ~~~~~ipVi~n----GgI~s~--~da~~~l~~~gad~VmiGR~ 169 (287)
++..++||+.. +|-+.. .-+..+.. .||||+||=+-
T Consensus 307 k~~~~lpV~~D~th~~G~r~~v~~~a~AAvA-~GA~gl~iE~H 348 (385)
T 3nvt_A 307 KKETHLPVMVDVTHSTGRKDLLLPCAKAALA-IEADGVMAEVH 348 (385)
T ss_dssp HHHBSSCEEEEHHHHHCCGGGHHHHHHHHHH-TTCSEEEEEBC
T ss_pred HHhcCCCEEEcCCCCCCccchHHHHHHHHHH-hCCCEEEEEec
Confidence 98889999764 232222 23445555 69999999753
No 335
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=96.37 E-value=0.18 Score=44.29 Aligned_cols=113 Identities=14% Similarity=0.092 Sum_probs=75.1
Q ss_pred EEecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC--CC
Q 023070 13 VQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF--PN 88 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g--~~ 88 (287)
+-+...|.-. |+++ +.|+|.| + .|....++.- ||-..+.-..+.+..-+++|++.+ ..||.+.+-.| .+
T Consensus 32 ~m~tayDa~s----A~l~e~aG~d~i-l-vGdSl~~~~l-G~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s 104 (275)
T 3vav_A 32 AMLTCYDASF----AALLDRANVDVQ-L-IGDSLGNVLQ-GQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGT 104 (275)
T ss_dssp EEEECCSHHH----HHHHHHTTCSEE-E-ECTTHHHHTT-CCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSS
T ss_pred EEEeCcCHHH----HHHHHHcCCCEE-E-ECcHHHHHHc-CCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCC
Confidence 3444455433 5555 4599999 4 3333333322 234444455677777778888877 58999999875 35
Q ss_pred hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n 143 (287)
.+++.+-+.++.+.|+++|.+-+.. .-.+.|+.+.+ .+|||++.
T Consensus 105 ~~~a~~~a~rl~kaGa~aVklEdg~----------~~~~~i~~l~~-~GIpv~gH 148 (275)
T 3vav_A 105 PADAFASAVKLMRAGAQMVKFEGGE----------WLAETVRFLVE-RAVPVCAH 148 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCG----------GGHHHHHHHHH-TTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCch----------hHHHHHHHHHH-CCCCEEEe
Confidence 6677888888888999999987542 22467788776 48999864
No 336
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=96.36 E-value=0.077 Score=47.22 Aligned_cols=110 Identities=19% Similarity=0.195 Sum_probs=75.2
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc-cccHHHHH
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIK 130 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~-~~~~~~i~ 130 (287)
..|+..+.+.+++.+ +. ..+.||.+|-....+.++....++.+.+.|.+-|++.-|+.. +.+.. ..|+..+.
T Consensus 136 kIgA~~~~n~~LLr~----va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~--y~~~~~~vdl~~i~ 208 (298)
T 3fs2_A 136 QIPAFLCRQTDLLIA----AA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVS--FGYNTLVSDMRALP 208 (298)
T ss_dssp EECGGGTTCHHHHHH----HH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEE--CSSSCEECCTTHHH
T ss_pred EECccccCCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCCCccCHHHHH
Confidence 457888888886554 33 358999999766667788888889999999877766434332 12211 25888899
Q ss_pred HHHhhCCCcEEEe---------------cCCCC--HHHHHHHHHhcCccEEEEehhh
Q 023070 131 AVKNALRIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 131 ~i~~~~~ipVi~n---------------GgI~s--~~da~~~l~~~gad~VmiGR~~ 170 (287)
.+++ .++||++. ||-+. +.-+..++. .||||++|=+-+
T Consensus 209 ~lk~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvA-lGAdGl~IE~H~ 263 (298)
T 3fs2_A 209 IMAG-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVA-VGVAGFFIETHE 263 (298)
T ss_dssp HHHT-TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHH-HCCSEEEEEEES
T ss_pred HHHH-cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHH-cCCCEEEEEecC
Confidence 9998 79999983 33222 233445565 599999996543
No 337
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.35 E-value=0.044 Score=48.63 Aligned_cols=125 Identities=13% Similarity=0.132 Sum_probs=81.7
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~l 88 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVG----------TTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREAIEL 88 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHH
Confidence 6777888777 4577999998762 123333334454566666665544 489988743 2466899999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 89 a~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3tak_A 89 TKAAKDLGADAALLVTPYYNK---PTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAE 153 (291)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred HHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHc
Confidence 999999999999776332211 0001224667888888899986 43 44457777776664
No 338
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=96.34 E-value=0.043 Score=48.71 Aligned_cols=126 Identities=17% Similarity=0.125 Sum_probs=78.7
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~ 94 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~-~~t~~ai~ 87 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCG----------TTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS-NNTAASIA 87 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHHHH
Confidence 46677777777 5677999998872 223333334555566666665544 4899888532 45688999
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
+++.+++.|+|++-+..-.... .+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 88 la~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 88 MSKWAESIGVDGLLVITPYYNK---TTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCE 153 (291)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred HHHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 9999999999999776332211 0001123445566667788875 34 33346777766654
No 339
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.34 E-value=0.0029 Score=56.73 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=59.5
Q ss_pred HHHHHHHhhccC--CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh-----CC
Q 023070 65 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-----LR 137 (287)
Q Consensus 65 ~~iv~~v~~~~~--~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~-----~~ 137 (287)
.+-++++++... .++.+-+. +.+ -++...++|+|+|-++.. +.+.++++++. .+
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev~---tle----e~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~~ 244 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVECS---SLQ----EAVQAAEAGADLVLLDNF------------KPEELHPTATVLKAQFPS 244 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEES---SHH----HHHHHHHTTCSEEEEESC------------CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCcCCeEEEecC---CHH----HHHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCC
Confidence 344555555442 45555432 222 234445689999988741 12344433332 24
Q ss_pred CcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccch
Q 023070 138 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 177 (287)
Q Consensus 138 ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf 177 (287)
+||.++||| +++.+.++.+ +|+|++.+|+.....|++=
T Consensus 245 ~~I~ASGGI-t~~ni~~~~~-aGaD~i~vGs~i~~a~~~D 282 (299)
T 2jbm_A 245 VAVEASGGI-TLDNLPQFCG-PHIDVISMGMLTQAAPALD 282 (299)
T ss_dssp SEEEEESSC-CTTTHHHHCC-TTCCEEECTHHHHSCCCCC
T ss_pred eeEEEECCC-CHHHHHHHHH-CCCCEEEEChhhcCCCCcc
Confidence 899999999 8899998887 6999999999776667653
No 340
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.34 E-value=0.045 Score=48.09 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=71.0
Q ss_pred HHHHHHHHHhhccCCcEEEEecCC-CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc---------------cccH
Q 023070 63 LVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF---------------RADW 126 (287)
Q Consensus 63 ~~~~iv~~v~~~~~~pv~vKiR~g-~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~---------------~~~~ 126 (287)
.+.+..+.+++.-...+..=+-.| ++.+.+.++++.++++|+|.|.+---..++...++. ..-+
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 345555665544444555555555 467889999999999999999985222222111110 0115
Q ss_pred HHHHHHHhh-CCCcEEEecCCC-----CHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 127 NAIKAVKNA-LRIPVLANGNVR-----HMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 127 ~~i~~i~~~-~~ipVi~nGgI~-----s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
+.++++++. +++||+.-|-.+ ..+...+.+.+.|+|+|.+.---+....
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~ 138 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESA 138 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCH
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHH
Confidence 778888887 899999876532 2255555555579999999654444433
No 341
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.33 E-value=0.012 Score=52.56 Aligned_cols=88 Identities=17% Similarity=0.216 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCCEEEEecc-CCCCcCCC--CccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehh
Q 023070 93 IKYAKMLEDAGCSLLAVHGR-TRDEKDGK--KFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 93 ~~~a~~l~~~G~~~I~vh~r-t~~~~~~~--~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~ 169 (287)
.++|+..+++|++.|.+--+ +.+.+... ....+.+.++++++.+++||++-+++...++++.+.+ .|||.| -...
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~a-aGAD~I-d~s~ 108 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEE-LKVDML-DESE 108 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHH-TTCSEE-EEET
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHH-cCCCEE-EcCC
Confidence 47899999999999977521 11111111 1135789999999999999999888888888887775 799999 3223
Q ss_pred hhhCccchhchhh
Q 023070 170 LLENPALFAGFRT 182 (287)
Q Consensus 170 ~l~nP~lf~~~~~ 182 (287)
.+..+.+...++.
T Consensus 109 ~~~~~~li~~i~~ 121 (297)
T 4adt_A 109 VLTMADEYNHINK 121 (297)
T ss_dssp TSCCSCSSCCCCG
T ss_pred CCCHHHHHHHHHh
Confidence 3456677776654
No 342
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=96.29 E-value=0.038 Score=50.20 Aligned_cols=90 Identities=17% Similarity=0.128 Sum_probs=62.5
Q ss_pred ccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccc----cHHHHHHHHhhCCCcEEEe--cCCC
Q 023070 74 NLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA----DWNAIKAVKNALRIPVLAN--GNVR 147 (287)
Q Consensus 74 ~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~----~~~~i~~i~~~~~ipVi~n--GgI~ 147 (287)
..+.|+.+.+..+.+.+. +.+.++..|+++|.+|.....+.....+.. .++.++.+++.+++||+.- |...
T Consensus 114 ~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~ 190 (349)
T 1p0k_A 114 NPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGM 190 (349)
T ss_dssp CSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCC
T ss_pred CCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 457899988876655443 445677889999999865433211111111 3578999999899999975 4557
Q ss_pred CHHHHHHHHHhcCccEEEEe
Q 023070 148 HMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 148 s~~da~~~l~~~gad~VmiG 167 (287)
+++++..+.+ .|+|+|.+.
T Consensus 191 ~~~~a~~a~~-~Gad~I~v~ 209 (349)
T 1p0k_A 191 SKASAGKLYE-AGAAAVDIG 209 (349)
T ss_dssp CHHHHHHHHH-HTCSEEEEE
T ss_pred CHHHHHHHHH-cCCCEEEEc
Confidence 8999988877 699999884
No 343
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.28 E-value=0.076 Score=47.43 Aligned_cols=145 Identities=15% Similarity=0.213 Sum_probs=87.7
Q ss_pred CCCEEEEe---cCCCHHHHHHHHHH-HcCCCCEEEEeccC-ChhhhhcCcc-cccccCChHHHHHHHHHHhhc--cCCcE
Q 023070 8 DRPLFVQF---CANDPEILLNAARR-VEPYCDYVDINLGC-PQRIARRGNY-GAFLMDNLPLVKSLVEKLALN--LNVPV 79 (287)
Q Consensus 8 ~~p~~~Qi---~g~~~~~~~~aA~~-~~~g~d~IdiN~gc-P~~~~~~~~~-G~~l~~~~~~~~~iv~~v~~~--~~~pv 79 (287)
+.|+++-+ +| +|+...+.++. .+.|+.+|.|--.. |.+ .++. |..+....+.+.+|-.++... .+.++
T Consensus 80 ~~PviaD~d~Gyg-~~~~v~~tv~~l~~aGaagv~iEDq~~~Kr---cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~ 155 (302)
T 3fa4_A 80 STPVIADADTGYG-GPIMVARTTEQYSRSGVAAFHIEDQVQTKR---CGHLAGKILVDTDTYVTRIRAAVQARQRIGSDI 155 (302)
T ss_dssp TSCEEEECTTTTS-SHHHHHHHHHHHHHTTCCEEEECSBCCC----------CCCBCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEECCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCcc---cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCE
Confidence 67888665 34 58888888874 56799999997432 221 1222 233444334444443333221 24444
Q ss_pred EEEecCC----CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEe---cC---CCC
Q 023070 80 SCKIRVF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLAN---GN---VRH 148 (287)
Q Consensus 80 ~vKiR~g----~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~n---Gg---I~s 148 (287)
.+=-|+. ...+++++=++.+.++|+|.|-+++. .+.+.++++.+.+ ++|+.+| || ..|
T Consensus 156 ~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~-----------~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~ 224 (302)
T 3fa4_A 156 VVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGI-----------TSREMARQVIQDLAGWPLLLNMVEHGATPSIS 224 (302)
T ss_dssp EEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTC-----------CCHHHHHHHHHHTTTSCEEEECCTTSSSCCCC
T ss_pred EEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCC-----------CCHHHHHHHHHHhcCCceeEEEecCCCCCCCC
Confidence 4444442 34678888899999999999999864 2346688888887 4898776 33 234
Q ss_pred HHHHHHHHHhcCccEEEEehhhh
Q 023070 149 MEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 149 ~~da~~~l~~~gad~VmiGR~~l 171 (287)
.+++ - +.|+..|..+-.++
T Consensus 225 ~~eL---~-~lGv~~v~~~~~~~ 243 (302)
T 3fa4_A 225 AAEA---K-EMGFRIIIFPFAAL 243 (302)
T ss_dssp HHHH---H-HHTCSEEEETTTTH
T ss_pred HHHH---H-HcCCCEEEEchHHH
Confidence 4433 3 35899888875543
No 344
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.28 E-value=0.011 Score=49.18 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
.-++.+.+...|++-+- |+..--+.++++ +++|||+.|+|+|.+++.+ ++ .|||+|..|.--+.+
T Consensus 119 ~~~~~I~~~kPD~iEiL----------Pg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~-aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 119 RGIEQIETLGVDVVEVL----------PGAVAPKVARKI---PGRTVIAAGLVETEEEARE-IL-KHVSAISTSSRILWK 183 (188)
T ss_dssp HHHHHHHHHTCSEEEEE----------SGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HT-TTSSEEEECCHHHHT
T ss_pred hhhhhccccCCCeEeec----------CCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-HH-CCCeEEEeCCHHHhC
Confidence 34455566667766554 222223556555 6899999999999999999 88 599999999766544
No 345
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.24 E-value=0.011 Score=54.04 Aligned_cols=43 Identities=19% Similarity=0.529 Sum_probs=37.3
Q ss_pred cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 123 RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 123 ~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
...|+.++.+++.+++||+.-| +.+++++..+.+ .|+|+|.+.
T Consensus 203 ~~~w~~i~~lr~~~~~PvivK~-v~~~e~A~~a~~-~GaD~I~vs 245 (352)
T 3sgz_A 203 SFCWNDLSLLQSITRLPIILKG-ILTKEDAELAMK-HNVQGIVVS 245 (352)
T ss_dssp TCCHHHHHHHHHHCCSCEEEEE-ECSHHHHHHHHH-TTCSEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHHH-cCCCEEEEe
Confidence 4689999999999999998864 689999998887 699999874
No 346
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.24 E-value=0.11 Score=46.66 Aligned_cols=126 Identities=11% Similarity=0.063 Sum_probs=83.7
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~l 94 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAG----------TTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDSIEF 94 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESS----------TTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHH
Confidence 5567777776 5678999999983 233333345555677777776655 589988753 2456789999
Q ss_pred HHHHHHcCC-CEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHHh
Q 023070 96 AKMLEDAGC-SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEE 158 (287)
Q Consensus 96 a~~l~~~G~-~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~~ 158 (287)
++.+++.|+ |++.+..-.... .+...-.++++.+.+++++||+ +| |---+++.+.++.+.
T Consensus 95 a~~A~~~Ga~davlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (311)
T 3h5d_A 95 VKEVAEFGGFAAGLAIVPYYNK---PSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADH 161 (311)
T ss_dssp HHHHHHSCCCSEEEEECCCSSC---CCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTS
T ss_pred HHHHHhcCCCcEEEEcCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC
Confidence 999999996 999776432211 0001224667888888899986 44 444577777776653
No 347
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.19 E-value=0.083 Score=48.12 Aligned_cols=107 Identities=11% Similarity=0.149 Sum_probs=76.7
Q ss_pred ccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHH
Q 023070 53 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAV 132 (287)
Q Consensus 53 ~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i 132 (287)
-||.=+++..++.++-+ .+.||.+|.... +.++....++.+.+.|.+.+.+|+.+.-+. .....|+..|..+
T Consensus 130 I~S~~~~n~~LL~~va~-----~gkPviLstGma-t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~--~~~~~nL~ai~~l 201 (349)
T 2wqp_A 130 IGSGECNNYPLIKLVAS-----FGKPIILSTGMN-SIESIKKSVEIIREAGVPYALLHCTNIYPT--PYEDVRLGGMNDL 201 (349)
T ss_dssp ECGGGTTCHHHHHHHHT-----TCSCEEEECTTC-CHHHHHHHHHHHHHHTCCEEEEECCCCSSC--CGGGCCTHHHHHH
T ss_pred ECcccccCHHHHHHHHh-----cCCeEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEeccCCCCC--ChhhcCHHHHHHH
Confidence 36666788887665533 589999997664 778888888888899998888886543322 1224789999999
Q ss_pred HhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhh
Q 023070 133 KNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 133 ~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~ 170 (287)
++.. ++||..++--....-+..++. .||| ||=+-+
T Consensus 202 k~~f~~lpVg~sdHt~G~~~~~AAvA-lGA~--iIEkH~ 237 (349)
T 2wqp_A 202 SEAFPDAIIGLSDHTLDNYACLGAVA-LGGS--ILERHF 237 (349)
T ss_dssp HHHCTTSEEEEECCSSSSHHHHHHHH-HTCC--EEEEEB
T ss_pred HHHCCCCCEEeCCCCCcHHHHHHHHH-hCCC--EEEeCC
Confidence 9998 899988765444566666676 5898 554433
No 348
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=96.19 E-value=0.032 Score=52.00 Aligned_cols=117 Identities=11% Similarity=0.072 Sum_probs=86.3
Q ss_pred HcCCCCEEEEecc-CChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCE
Q 023070 30 VEPYCDYVDINLG-CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSL 106 (287)
Q Consensus 30 ~~~g~d~IdiN~g-cP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~ 106 (287)
.+.||..+.+..+ .|.. |. .+++.-.+.++++|+.+ ++++.+...-+|+..+++++++.+++.++.+
T Consensus 171 ~~~Gf~~~K~Kv~~g~~~-------g~---~~~~~di~~v~avRea~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~ 240 (404)
T 3ekg_A 171 QKMGFIGGKMPLHHGPSE-------GE---EGLKKNLEELATMRERVGPDFWLMFDCWMSLDLNYATRLARGAREYGLKW 240 (404)
T ss_dssp HHTTCSEEEEECCCCGGG-------HH---HHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCE
T ss_pred HHcCCCEEEEecCCCCcc-------cc---ccHHHHHHHHHHHHHHhCCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcE
Confidence 3568888888754 1210 11 12455667788888876 5788999888999999999999999999887
Q ss_pred EEEeccCCCCcCCCCccccHHHHHHHHhhCCCcE-EEec-CCCCHHHHHHHHHhcCccEEEE
Q 023070 107 LAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPV-LANG-NVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 107 I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipV-i~nG-gI~s~~da~~~l~~~gad~Vmi 166 (287)
| ++.- .+.|++.++++++.+++|| |+.| .+.+..++.++++...+|.|++
T Consensus 241 i-------EeP~---~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~ 292 (404)
T 3ekg_A 241 I-------EEAL---PPDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQP 292 (404)
T ss_dssp E-------ECCS---CTTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred E-------ecCC---CcccHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEec
Confidence 7 2211 1357889999999988874 3433 5899999999998777888876
No 349
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.18 E-value=0.071 Score=44.90 Aligned_cols=128 Identities=17% Similarity=0.222 Sum_probs=79.6
Q ss_pred ecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHH
Q 023070 15 FCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 15 i~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~ 94 (287)
+.-.+++.+.+.++.+ +.|.|.|| |. .+++.+.+ ++. ++|+.--++.... . +
T Consensus 60 fvn~~~~~i~~~~~~~--~ld~vQLH-------------G~---e~~~~~~~----l~~--~~~vika~~v~~~-~---~ 111 (205)
T 1nsj_A 60 FVNEEPEKILDVASYV--QLNAVQLH-------------GE---EPIELCRK----IAE--RILVIKAVGVSNE-R---D 111 (205)
T ss_dssp ESSCCHHHHHHHHHHH--TCSEEEEC-------------SC---CCHHHHHH----HHT--TSEEEEEEEESSH-H---H
T ss_pred EeCCCHHHHHHHHHhh--CCCEEEEC-------------CC---CCHHHHHH----Hhc--CCCEEEEEEcCCH-H---H
Confidence 3345666666666544 67999999 21 34554433 322 3667655554321 1 2
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCc-cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhC
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 173 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~-~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~n 173 (287)
+ ..+.+..+|++.+..... .++++| ..||+.++.++ ..+.|++..||+ +++.+.++++..++.||=+.+|.-..
T Consensus 112 l-~~~~~~~~d~~LlD~~~~--~~GGtG~~fdw~~l~~~~-~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~ 186 (205)
T 1nsj_A 112 M-ERALNYREFPILLDTKTP--EYGGSGKTFDWSLILPYR-DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAF 186 (205)
T ss_dssp H-HHHGGGTTSCEEEEESCS--SSSSCCSCCCGGGTGGGG-GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEE
T ss_pred H-HHHHHcCCCEEEECCCCC--CCCCCCCccCHHHHHhhh-cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecC
Confidence 2 223344489998875443 122222 47998776542 336899999999 67999888887799999999887644
Q ss_pred cc
Q 023070 174 PA 175 (287)
Q Consensus 174 P~ 175 (287)
|.
T Consensus 187 pG 188 (205)
T 1nsj_A 187 PG 188 (205)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 350
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=96.17 E-value=0.017 Score=52.02 Aligned_cols=121 Identities=12% Similarity=0.129 Sum_probs=85.3
Q ss_pred EecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhh
Q 023070 14 QFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQD 91 (287)
Q Consensus 14 Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~ 91 (287)
.+.+.+|+.+.+.++ .++.||..+.+..|. .. ..+.++++++.. ++.+.+..+-+|+.++
T Consensus 127 ~~~~~~~e~~~~~a~~~~~~G~~~~KiKvg~--------------~~----d~~~v~avr~~~~~~~l~vDaN~~~~~~~ 188 (324)
T 1jpd_X 127 TVVIGTPDQMANSASTLWQAGAKLLKVKLDN--------------HL----ISERMVAIRTAVPDATLIVDANESWRAEG 188 (324)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS--------------SC----HHHHHHHHHHHCTTSEEEEECTTCCCSTT
T ss_pred EeeCCCHHHHHHHHHHHHHcCCCEEEEEeCC--------------ch----HHHHHHHHHHhCCCCEEEEECcCCCCHHH
Confidence 455678998887666 567899999997651 01 234566676655 5677777777899999
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+.++++.+++.++.+| ++.-. +.|++.+++++ .++||.+.=.+.+..++.++++. +|.+.+
T Consensus 189 a~~~~~~l~~~~i~~i-------EqP~~---~~d~~~~~~l~--~~ipIa~dE~~~~~~~~~~~~~~--~~~i~i 249 (324)
T 1jpd_X 189 LAARCQLLADLGVAML-------EQPLP---AQDDAALENFI--HPLPICADESCHTRSNLKALKGR--YEMVNI 249 (324)
T ss_dssp HHHHHHHHHHTTCCEE-------ECCSC---TTSCGGGGSSC--CSSCEEESTTCSSGGGHHHHBTT--BSEEEE
T ss_pred HHHHHHHHHhCCCCEE-------ECCCC---CCCHHHHHhcc--CCCCEEEcCCCCCHHHHHHHHhh--CCEEEE
Confidence 9999999999988877 11100 12344333332 57999998889999999988863 776665
No 351
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=96.16 E-value=0.014 Score=54.39 Aligned_cols=145 Identities=13% Similarity=0.177 Sum_probs=96.3
Q ss_pred CCCCEEEEecC---CCHHHHHHHHH-HHcCC-CCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcE
Q 023070 7 EDRPLFVQFCA---NDPEILLNAAR-RVEPY-CDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPV 79 (287)
Q Consensus 7 ~~~p~~~Qi~g---~~~~~~~~aA~-~~~~g-~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv 79 (287)
...|+..+.++ .+|+.+.+.++ .++.| |..+.+..|.. +..+....+...+.+++|++.+ ++.+
T Consensus 165 ~~vp~~~~~g~~~~~~~~~~~~~a~~~~~~G~~~~~KiKvG~~---------~~~~~~~~~~d~~~v~avR~~~G~~~~l 235 (413)
T 1kcz_A 165 NAVPVFAQSGDDRYDNVDKMIIKEADVLPHALINNVEEKLGLK---------GEKLLEYVKWLRDRIIKLRVREDYAPIF 235 (413)
T ss_dssp CCCCEECCCTTCTTHHHHHHHHTTCSEEEECCCCCCCCCCCTT---------SHHHHHHHHHHHHHHHHHCSSTTCCCEE
T ss_pred CCeeeeEecCccccCCHHHHHHHHHHHHHhcchhheeeccCCC---------ccchhhHHHHHHHHHHHHHHhcCCCceE
Confidence 45566665543 24555555443 34557 77777755421 0001111122557788888876 4667
Q ss_pred EEEecCC------CChhhHHHHHHHHHHc--CCC-EEEEeccCCCCcCCCC-ccccHHHHHHHHhh-----CCCcEEEec
Q 023070 80 SCKIRVF------PNLQDTIKYAKMLEDA--GCS-LLAVHGRTRDEKDGKK-FRADWNAIKAVKNA-----LRIPVLANG 144 (287)
Q Consensus 80 ~vKiR~g------~~~~~~~~~a~~l~~~--G~~-~I~vh~rt~~~~~~~~-~~~~~~~i~~i~~~-----~~ipVi~nG 144 (287)
.+...-+ |+.++++++++.+++. ++. +| ++.-... .+.||+.++++++. +++||.+.=
T Consensus 236 ~vDaN~~~~~~~~~~~~~a~~~~~~L~~~~~~i~~~i-------EqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE 308 (413)
T 1kcz_A 236 HIDVYGTIGAAFDVDIKAMADYIQTLAEAAKPFHLRI-------EGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADE 308 (413)
T ss_dssp EEECTTHHHHHTTTCHHHHHHHHHHHHHHHTTSCEEE-------ECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECT
T ss_pred EEecCCCcccccCCCHHHHHHHHHHHHhhcCCcceEE-------ecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCC
Confidence 7777777 8989999999999998 555 33 1110000 12378889999988 889999988
Q ss_pred CCCCHHHHHHHHHhcCccEEEEe
Q 023070 145 NVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 145 gI~s~~da~~~l~~~gad~VmiG 167 (287)
.+.+++++.++++...+|.|.+=
T Consensus 309 ~~~~~~~~~~~i~~~a~d~v~ik 331 (413)
T 1kcz_A 309 WCNTVEDVKFFTDNKAGHMVQIK 331 (413)
T ss_dssp TCCSHHHHHHHHHTTCSSEEEEC
T ss_pred CcCCHHHHHHHHHhCCCCEEEeC
Confidence 89999999999998789999883
No 352
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.09 E-value=0.096 Score=43.51 Aligned_cols=132 Identities=19% Similarity=0.188 Sum_probs=75.8
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCC
Q 023070 10 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPN 88 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~ 88 (287)
++++-+-..+.++..+.++.+..|+|.|+++++. . .. +| + ++++++++.. +.|+.+-+-.. +
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~~--~--~~--~g------~----~~i~~l~~~~~~~~i~~~l~~~-d 64 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAEYVDIIELGTPL--I--KA--EG------L----SVITAVKKAHPDKIVFADMKTM-D 64 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGGGCSEEEECHHH--H--HH--HC------T----HHHHHHHHHSTTSEEEEEEEEC-S
T ss_pred eEEEEeCCCCHHHHHHHHHHhhccCCEEEECcHH--H--Hh--hC------H----HHHHHHHHhCCCCeEEEEEEec-C
Confidence 3555665668888888887666688999996532 1 11 12 2 3566666665 77887633222 2
Q ss_pred hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccH-HHHHHHHhhCCCcEEE-ecCCCCHHHHHHHHHhcCccEEEE
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNALRIPVLA-NGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~-~~i~~i~~~~~ipVi~-nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
. ...+++.+.++|++++++|.-... ... +.++.+++ .++++.+ .-...++++..+.+...|+|.|-+
T Consensus 65 i--~~~~~~~a~~~Gad~v~vh~~~~~--------~~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~ 133 (207)
T 3ajx_A 65 A--GELEADIAFKAGADLVTVLGSADD--------STIAGAVKAAQA-HNKGVVVDLIGIEDKATRAQEVRALGAKFVEM 133 (207)
T ss_dssp C--HHHHHHHHHHTTCSEEEEETTSCH--------HHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHTTCSEEEE
T ss_pred c--cHHHHHHHHhCCCCEEEEeccCCh--------HHHHHHHHHHHH-cCCceEEEEecCCChHHHHHHHHHhCCCEEEE
Confidence 1 233578888999999999965321 112 22233333 2555411 223447776333444468999855
Q ss_pred ehh
Q 023070 167 AES 169 (287)
Q Consensus 167 GR~ 169 (287)
..+
T Consensus 134 ~~~ 136 (207)
T 3ajx_A 134 HAG 136 (207)
T ss_dssp ECC
T ss_pred Eec
Confidence 433
No 353
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.05 E-value=0.11 Score=43.77 Aligned_cols=128 Identities=15% Similarity=0.120 Sum_probs=79.1
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc-cCCcE--EEEecCC
Q 023070 10 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-LNVPV--SCKIRVF 86 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~-~~~pv--~vKiR~g 86 (287)
++++-+=-.+.++..+.++.+..++|.+|+.+ |. +.. +| .++++++++. .+.|+ .+|+-
T Consensus 8 ~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~--~~-~~~---~G----------~~~i~~lr~~~~~~~i~ld~~l~-- 69 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNVASYVDVIEVGT--IL-AFA---EG----------MKAVSTLRHNHPNHILVCDMKTT-- 69 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECH--HH-HHH---HT----------THHHHHHHHHCTTSEEEEEEEEC--
T ss_pred CeEEEeCCCCHHHHHHHHHHhcCCceEEEeCc--HH-HHh---cC----------HHHHHHHHHhCCCCcEEEEEeec--
Confidence 46666655677777777776666899999985 21 111 12 3567777766 35454 56643
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccH-HHHHHHHhhCCCcEEE-ecCCCCHHHHHHHHHhcCccEE
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNALRIPVLA-NGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~-~~i~~i~~~~~ipVi~-nGgI~s~~da~~~l~~~gad~V 164 (287)
.. ...+++.+.++|++++++|+-... ... +.++.+++. ++++++ .=++.|++++.++.+. |+|.+
T Consensus 70 d~---p~~~~~~~~~aGad~i~vh~~~~~--------~~~~~~~~~~~~~-g~~~~~d~l~~~T~~~~~~~~~~-g~d~v 136 (218)
T 3jr2_A 70 DG---GAILSRMAFEAGADWITVSAAAHI--------ATIAACKKVADEL-NGEIQIEIYGNWTMQDAKAWVDL-GITQA 136 (218)
T ss_dssp SC---HHHHHHHHHHHTCSEEEEETTSCH--------HHHHHHHHHHHHH-TCEEEEECCSSCCHHHHHHHHHT-TCCEE
T ss_pred cc---HHHHHHHHHhcCCCEEEEecCCCH--------HHHHHHHHHHHHh-CCccceeeeecCCHHHHHHHHHc-Cccce
Confidence 22 234678899999999999965321 111 334445443 555443 3334678888888774 99988
Q ss_pred EEeh
Q 023070 165 LSAE 168 (287)
Q Consensus 165 miGR 168 (287)
.+..
T Consensus 137 ~~~~ 140 (218)
T 3jr2_A 137 IYHR 140 (218)
T ss_dssp EEEC
T ss_pred eeee
Confidence 7644
No 354
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.04 E-value=0.075 Score=46.74 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=69.5
Q ss_pred HHHHHHHHHhhccCCcEEEEecCC-CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCC---------------ccccH
Q 023070 63 LVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK---------------FRADW 126 (287)
Q Consensus 63 ~~~~iv~~v~~~~~~pv~vKiR~g-~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~---------------~~~~~ 126 (287)
.+.+..+.+++.-...+..=+-.| ++.+.+.++++.+++.|+|.|-+---..++...++ ...-+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 355566666554444555555556 56788999999999999999988522222211111 01125
Q ss_pred HHHHHHHhh-CCCcEEEecCCC-----CHHHHHHHHHhcCccEEEEehhhhh
Q 023070 127 NAIKAVKNA-LRIPVLANGNVR-----HMEDVQKCLEETGCEGVLSAESLLE 172 (287)
Q Consensus 127 ~~i~~i~~~-~~ipVi~nGgI~-----s~~da~~~l~~~gad~VmiGR~~l~ 172 (287)
+.++++++. +++||+.-|-.+ ..+...+...+.|+|||.+.---+.
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~e 137 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTN 137 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGG
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHH
Confidence 778888887 799999876432 3354444555579999999544333
No 355
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.04 E-value=0.11 Score=46.31 Aligned_cols=127 Identities=13% Similarity=0.004 Sum_probs=83.3
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~l 101 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQG----------SNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQATVEM 101 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHHHHHH
Confidence 6677777776 4567999998872 234333445556677788777765 588888742 2467889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++.+..-..... ..+...-+++++.+.+++++||+ +| |---+++.+.++.+
T Consensus 102 a~~A~~~Gadavlv~~P~y~~~-~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 102 TVSMAQVGADAAMVVTPCYYRG-RMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp HHHHHHTTCSEEEEECCCTTGG-GCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEcCCCcCCC-CCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 9999999999997753221100 00001234667788888889986 44 32357777777764
No 356
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.04 E-value=0.18 Score=44.10 Aligned_cols=136 Identities=13% Similarity=0.130 Sum_probs=88.2
Q ss_pred EEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCC-cEEEEecCCC--C
Q 023070 13 VQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVFP--N 88 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~-pv~vKiR~g~--~ 88 (287)
+-+...|.-. |++++ .|+|.|=+ |....++.- |+-..+.-..+.+..-+++|++.++. +|.+.+..|. +
T Consensus 20 ~~~tayD~~s----A~l~e~aG~d~ilv--Gdsl~~~~l-G~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 92 (264)
T 1m3u_A 20 ATITAYDYSF----AKLFADEGLNVMLV--GDSLGMTVQ-GHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYAT 92 (264)
T ss_dssp EEEECCSHHH----HHHHHHHTCCEEEE--CTTHHHHTT-CCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSS
T ss_pred EEEeCcCHHH----HHHHHHcCCCEEEE--CHHHHHHHc-CCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCC
Confidence 3455566433 55554 49999966 766655443 34555556677777788888887764 5677765532 4
Q ss_pred hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE-----------ecCC----CCHHHHH
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-----------NGNV----RHMEDVQ 153 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~-----------nGgI----~s~~da~ 153 (287)
.+++++.+.++.++|+++|.+-+.. .-.+.|+.+.+. ++||++ .||. ++.+.+.
T Consensus 93 ~~~a~~~a~rl~kaGa~aVklEgg~----------e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~a~ 161 (264)
T 1m3u_A 93 PEQAFENAATVMRAGANMVKIEGGE----------WLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGD 161 (264)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCSG----------GGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcH----------HHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHHHHH
Confidence 5677777888999999999886541 223667777654 799983 3554 3544444
Q ss_pred HHH------HhcCccEEEE
Q 023070 154 KCL------EETGCEGVLS 166 (287)
Q Consensus 154 ~~l------~~~gad~Vmi 166 (287)
+++ ++.|||++.+
T Consensus 162 ~~i~rA~a~~eAGA~~ivl 180 (264)
T 1m3u_A 162 QLLSDALALEAAGAQLLVL 180 (264)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEE
Confidence 433 3359998877
No 357
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.03 E-value=0.04 Score=46.94 Aligned_cols=136 Identities=19% Similarity=0.205 Sum_probs=81.4
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 9 RPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 9 ~p~~~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
.-++..|...|...+.+.++.+ +.|+|.|.+-.- + |.... +.....++++++++.++.|+.+-+-. .
T Consensus 7 ~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~--------D--g~fv~-~~~~~~~~~~~lr~~~~~~~~v~lmv-~ 74 (228)
T 1h1y_A 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIM--------D--GHFVP-NLTIGAPVIQSLRKHTKAYLDCHLMV-T 74 (228)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE--------B--SSSSS-CBCBCHHHHHHHHTTCCSEEEEEEES-S
T ss_pred CeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEe--------c--CCcCc-chhhCHHHHHHHHhhcCCcEEEEEEe-c
Confidence 3477899999999999988865 568998766530 1 11100 11112366677777666677655433 2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCcccc-HHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhc--CccEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD-WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET--GCEGV 164 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~-~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~--gad~V 164 (287)
+. .++++.+.++|+|.+++|+-... .. .+.++.+++. ++.++..=.-.|+.+..+.+... ++|.|
T Consensus 75 d~---~~~i~~~~~agad~v~vH~~~~~--------~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~v 142 (228)
T 1h1y_A 75 NP---SDYVEPLAKAGASGFTFHIEVSR--------DNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELV 142 (228)
T ss_dssp CG---GGGHHHHHHHTCSEEEEEGGGCT--------TTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEE
T ss_pred CH---HHHHHHHHHcCCCEEEECCCCcc--------cHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEE
Confidence 32 33466667799999999976432 22 3556666654 55554433334544443344333 79999
Q ss_pred EEeh
Q 023070 165 LSAE 168 (287)
Q Consensus 165 miGR 168 (287)
.++.
T Consensus 143 l~~s 146 (228)
T 1h1y_A 143 LVMT 146 (228)
T ss_dssp EEES
T ss_pred EEEe
Confidence 8863
No 358
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.02 E-value=0.0042 Score=55.51 Aligned_cols=91 Identities=11% Similarity=0.189 Sum_probs=48.4
Q ss_pred HHHHHHHhhccC--CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC------
Q 023070 65 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL------ 136 (287)
Q Consensus 65 ~~iv~~v~~~~~--~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~------ 136 (287)
.+-++++++... .++.+-+. +.++ ++...++|+|+|-++..+ .+.++++++.+
T Consensus 186 ~~ai~~~r~~~~~~~~i~vev~---tlee----~~~A~~aGaD~I~ld~~~------------~~~l~~~v~~l~~~~~g 246 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEVECL---SEDE----ATEAIEAGADVIMLDNFK------------GDGLKMCAQSLKNKWNG 246 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEEECS---SSHH----HHHHHHHTCSEEECCC-------------------------------
T ss_pred HHHHHHHHHhcCcCCeEEEecC---CHHH----HHHHHHcCCCEEEECCCC------------HHHHHHHHHHhcccccC
Confidence 444555555443 45555432 2233 333446899999876421 12233333222
Q ss_pred --CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccc
Q 023070 137 --RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 176 (287)
Q Consensus 137 --~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~l 176 (287)
++||.++||| +++.+.++.+ +|+|++.+|+.....|++
T Consensus 247 ~~~v~I~ASGGI-t~~ni~~~~~-~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 247 KKHFLLECSGGL-NLDNLEEYLC-DDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp --CCEEEEECCC-CC------CC-CSCSEEECGGGTSSCCCC
T ss_pred CCCeEEEEECCC-CHHHHHHHHH-cCCCEEEEechhcCCCCC
Confidence 3899999999 8899998887 799999999887665653
No 359
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.02 E-value=0.035 Score=49.54 Aligned_cols=124 Identities=14% Similarity=0.107 Sum_probs=78.4
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+++++
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~l 91 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLG----------STGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVADAVAQ 91 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHH
Confidence 6777888777 5678999997762 223333334455566666665544 4888887532 456889999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCCCCHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL 156 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI~s~~da~~~l 156 (287)
++.+++.|+|++.+..-..... +...-+++++.+.+++++||+ +| |---+++.+.++.
T Consensus 92 a~~a~~~Gadavlv~~P~y~~~---~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 92 AKLYEKLGADGILAILEAYFPL---KDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHHTCSEEEEEECCSSCC---CHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCCCC---CHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 9999999999997753322110 001224567777777888875 44 2234566666554
No 360
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.01 E-value=0.081 Score=46.55 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=69.2
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC------------
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV------------ 85 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~------------ 85 (287)
+|++..+.|. +++.|+++|.|=-| ....+.|+++.+ .++||..-+.+
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~ 152 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGG-------------------VWMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYK 152 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHH-cCCCeEeeeccCceeecccCCeE
Confidence 5776666554 56678888888622 233445555543 37888744332
Q ss_pred --C--CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 86 --F--PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 86 --g--~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
| ...+++++-++.++++|++.|.+.+.. -+..+++.+.+++|+|+-|.= .+|
T Consensus 153 v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp------------~~~a~~it~~l~iP~igIGaG------------~~~ 208 (275)
T 1o66_A 153 VQGRGGKAQALLNDAKAHDDAGAAVVLMECVL------------AELAKKVTETVSCPTIGIGAG------------ADC 208 (275)
T ss_dssp ------CHHHHHHHHHHHHHTTCSEEEEESCC------------HHHHHHHHHHCSSCEEEESSC------------SCS
T ss_pred EEeChHHHHHHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHhCCCCEEEECCC------------CCC
Confidence 1 123567778889999999999997531 156788999999999987642 368
Q ss_pred cEEEEe
Q 023070 162 EGVLSA 167 (287)
Q Consensus 162 d~VmiG 167 (287)
||-++-
T Consensus 209 dgQvLV 214 (275)
T 1o66_A 209 DGQVLV 214 (275)
T ss_dssp SEEEEC
T ss_pred Ccceee
Confidence 886543
No 361
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.95 E-value=0.018 Score=55.04 Aligned_cols=70 Identities=21% Similarity=0.304 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+..+.++.+.++|++.|.++..... ....++.++++++.. ++||++ |++.+++++..+.+ .|||+|.+|
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~-aGaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGH------SKGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAE-AGADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCS------BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHH-TTCSEEEEC
T ss_pred cchHHHHHHHhhcccceEEecccCCc------chhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHH-cCCCEEEEC
Confidence 45678889999999999999844321 124468899999887 788887 88999999998888 699999986
No 362
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.95 E-value=0.071 Score=47.92 Aligned_cols=95 Identities=12% Similarity=0.181 Sum_probs=69.5
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEecCCCC--hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC
Q 023070 59 DNLPLVKSLVEKLALNLNVPVSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL 136 (287)
Q Consensus 59 ~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~--~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~ 136 (287)
..++.+.+.++.+++..+.|+.+-+-.... ..+..+.++.+.+.|++.|.+|... + ++.++.+++.
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~---------p--~~~~~~l~~~- 117 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND---------P--GEHIAEFRRH- 117 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC---------C--HHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC---------c--HHHHHHHHHc-
Confidence 347888888888887777777666543210 2334567888889999999999531 1 4677778765
Q ss_pred CCcEEEecCCCCHHHHHHHHHhcCccEEEE-eh
Q 023070 137 RIPVLANGNVRHMEDVQKCLEETGCEGVLS-AE 168 (287)
Q Consensus 137 ~ipVi~nGgI~s~~da~~~l~~~gad~Vmi-GR 168 (287)
++||+. .+.+++++..+.+ .|+|+|.+ |.
T Consensus 118 gi~vi~--~v~t~~~a~~~~~-~GaD~i~v~g~ 147 (328)
T 2gjl_A 118 GVKVIH--KCTAVRHALKAER-LGVDAVSIDGF 147 (328)
T ss_dssp TCEEEE--EESSHHHHHHHHH-TTCSEEEEECT
T ss_pred CCCEEe--eCCCHHHHHHHHH-cCCCEEEEECC
Confidence 888885 4889999998887 59999988 54
No 363
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=95.93 E-value=0.069 Score=46.74 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=60.2
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 97 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~ 97 (287)
+++...+-|+ .+++|+|.||||.| +.....++.+.+++..+.+.+++|+++... + .+.++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g------------~~~v~~~ee~~rvv~~i~~~~~~pisIDT~------~-~~v~~ 83 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVG------------PAVQDKVSAMEWLVEVTQEVSNLTLCLDST------N-IKAIE 83 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECS------C-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCC------------CCCCChHHHHHHHHHHHHHhCCCeEEEeCC------C-HHHHH
Confidence 5555555554 66789999999974 333456778888899888877999999832 1 23455
Q ss_pred HHHHc--CCCEE-EEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE
Q 023070 98 MLEDA--GCSLL-AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 142 (287)
Q Consensus 98 ~l~~~--G~~~I-~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~ 142 (287)
...++ |++.| .|++. ..+++.+..+....+.|+++
T Consensus 84 aAl~a~~Ga~iINdvs~~----------~d~~~~~~~~~a~~~~~vvl 121 (262)
T 1f6y_A 84 AGLKKCKNRAMINSTNAE----------REKVEKLFPLAVEHGAALIG 121 (262)
T ss_dssp HHHHHCSSCEEEEEECSC----------HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhhCCCCCEEEECCCC----------cccHHHHHHHHHHhCCcEEE
Confidence 55555 88877 35542 12233344455556788876
No 364
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=95.92 E-value=0.075 Score=48.80 Aligned_cols=90 Identities=16% Similarity=0.247 Sum_probs=63.7
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCC--------------C---------------cCC-------
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD--------------E---------------KDG------- 119 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~--------------~---------------~~~------- 119 (287)
+.|+.+-+-...+.+...+++++++++|++.|.||--... + ...
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 4566666544345566778888888899998888632111 0 000
Q ss_pred CCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 120 KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
......|+.++.+++.+++||++-| +.+++++..+.+ .|+|+|.+.
T Consensus 212 ~d~~~~~~~i~~lr~~~~~PvivK~-v~~~e~a~~a~~-~Gad~I~vs 257 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHSGLPVFVKG-IQHPEDADMAIK-RGASGIWVS 257 (368)
T ss_dssp BCSBCCHHHHHHHHHHSSSCEEEEE-ECSHHHHHHHHH-TTCSEEEEC
T ss_pred cCchhhHHHHHHHHHHcCCCEEEEc-CCCHHHHHHHHH-cCCCEEEEc
Confidence 0123578999999999999999864 789999998887 699999883
No 365
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.90 E-value=0.026 Score=52.47 Aligned_cols=67 Identities=27% Similarity=0.478 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 93 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 93 ~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+.++.+.++|++.|.+.... +.+ ...++.++++++..++||++ |++.|++++..+.+ .|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~-----G~~-~~~~e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~~-aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH-----GHS-LNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELIE-NGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC-----CSB-HHHHHHHHHHHTTCCCEEEE-EEECSHHHHHHHHH-TTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCC-----CCc-ccHHHHHHHHHhcCCCeEEE-eecCCHHHHHHHHH-cCCCEEEEe
Confidence 577889999999999874111 110 12357888998888899887 78999999998887 699999996
No 366
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=95.86 E-value=0.019 Score=49.31 Aligned_cols=133 Identities=14% Similarity=0.195 Sum_probs=82.8
Q ss_pred EEEEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCCh
Q 023070 11 LFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL 89 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~ 89 (287)
++..|...|...+.+..+.+. .|+|.|.+-.- + |... .+..+..++++++++.++.|+.+-+-. .+.
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~--------D--G~fv-p~~~~g~~~v~~lr~~~~~~~~vhlmv-~dp 74 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVM--------D--GRFV-PNITIGPLIVDAIRPLTKKTLDVHLMI-VEP 74 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE--------B--SSSS-SCBCBCHHHHHHHGGGCCSEEEEEEES-SSG
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEE--------e--cCCC-cchhhhHHHHHHHHhhcCCcEEEEEEc-cCH
Confidence 688999999999999998664 58998666530 0 1111 112222377888888777788865544 233
Q ss_pred hhHHHHHHHHHHcCCCEEEEecc--CCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGR--TRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~r--t~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+ ++++.+.++|+|++++|.- ... ...+.++.+++. ++-+...=.-.|+.+..+.+.. ++|.|.++
T Consensus 75 ~---~~i~~~~~aGadgv~vh~e~~~~~--------~~~~~~~~i~~~-g~~~gv~~~p~t~~e~~~~~~~-~~D~v~~m 141 (230)
T 1tqj_A 75 E---KYVEDFAKAGADIISVHVEHNASP--------HLHRTLCQIREL-GKKAGAVLNPSTPLDFLEYVLP-VCDLILIM 141 (230)
T ss_dssp G---GTHHHHHHHTCSEEEEECSTTTCT--------THHHHHHHHHHT-TCEEEEEECTTCCGGGGTTTGG-GCSEEEEE
T ss_pred H---HHHHHHHHcCCCEEEECcccccch--------hHHHHHHHHHHc-CCcEEEEEeCCCcHHHHHHHHh-cCCEEEEE
Confidence 3 3567778999999999954 211 123556666654 4333333344565555544443 79988776
Q ss_pred h
Q 023070 168 E 168 (287)
Q Consensus 168 R 168 (287)
.
T Consensus 142 s 142 (230)
T 1tqj_A 142 S 142 (230)
T ss_dssp S
T ss_pred E
Confidence 4
No 367
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=95.85 E-value=0.041 Score=48.76 Aligned_cols=93 Identities=8% Similarity=0.092 Sum_probs=60.8
Q ss_pred HHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccH-HHHHHHHhh-CCCcEE
Q 023070 65 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNA-LRIPVL 141 (287)
Q Consensus 65 ~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~-~~i~~i~~~-~~ipVi 141 (287)
.+.+++.++.. ..++.|-+. + .+-++.+.++|+|.|-+|..+. .++ +.++.++.. .++++.
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~---t----~eea~eal~aGaD~I~LDn~~~---------~~~~~~v~~l~~~~~~v~ie 245 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD---S----LEQLDAVLPEKPELILLDNFAV---------WQTQTAVQRRDSRAPTVMLE 245 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES---S----HHHHHHHGGGCCSEEEEETCCH---------HHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC---C----HHHHHHHHHcCCCEEEECCCCH---------HHHHHHHHHhhccCCCeEEE
Confidence 34555555543 225666543 2 3445566679999999986322 222 334444442 368999
Q ss_pred EecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 142 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 142 ~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++||| +++.+.++.+ +|+|.+.+|.....-|+
T Consensus 246 aSGGI-t~~~i~~~a~-tGVD~isvG~l~~~a~~ 277 (284)
T 1qpo_A 246 SSGGL-SLQTAATYAE-TGVDYLAVGALTHSVRV 277 (284)
T ss_dssp EESSC-CTTTHHHHHH-TTCSEEECGGGTSSBCC
T ss_pred EECCC-CHHHHHHHHh-cCCCEEEECHHHcCCCC
Confidence 99999 5799988887 79999999987666664
No 368
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.84 E-value=0.11 Score=46.69 Aligned_cols=127 Identities=9% Similarity=-0.023 Sum_probs=82.2
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 98 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILG----------TNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQVLEH 98 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHH
Confidence 6677877777 5677999998872 223333334555566677666554 589988752 2467899999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee-----cCC-CCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNV-RHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n-----GgI-~s~~da~~~l~ 157 (287)
++.+++.|+|++.+..-....+. .+...-+++++.+.+++++||+ +| .|+ -+++.+.++.+
T Consensus 99 a~~a~~~Gadavlv~~P~y~~kp-~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 99 INDASVAGANYVLVLPPAYFGKA-TTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp HHHHHHHTCSEEEECCCCC---C-CCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCcccCCC-CCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 99999999999977532111000 0001225677888888899986 33 244 57888877776
No 369
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=95.84 E-value=0.071 Score=47.30 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=71.4
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCC------CEEEEeccCCCCcCCCCc-cc
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC------SLLAVHGRTRDEKDGKKF-RA 124 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~------~~I~vh~rt~~~~~~~~~-~~ 124 (287)
..|+..+.+.+++. ++. ..+.||.+|-....+.++....++.+.+.|. +-|++.-|+.. +.+.. ..
T Consensus 112 kIgA~~~~n~~LLr----~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~--y~~~~~~v 184 (288)
T 3tml_A 112 QTPAFLCRQTDFIH----ACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVS--FGYNNLVS 184 (288)
T ss_dssp EECGGGTTCHHHHH----HHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEE--CSSSCEEC
T ss_pred EECcccccCHHHHH----HHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCC--CCCCcCcC
Confidence 45677777777544 433 4689999997665577788888888888887 55655333322 12211 24
Q ss_pred cHHHHHHHHhhCCCcEEEe---------------cCCCCH--HHHHHHHHhcCccEEEEehh
Q 023070 125 DWNAIKAVKNALRIPVLAN---------------GNVRHM--EDVQKCLEETGCEGVLSAES 169 (287)
Q Consensus 125 ~~~~i~~i~~~~~ipVi~n---------------GgI~s~--~da~~~l~~~gad~VmiGR~ 169 (287)
|+..+..+++ .++||++. ||-+.. .-+..++. .||||++|=+-
T Consensus 185 dl~~i~~lk~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA-~GadGl~iE~H 244 (288)
T 3tml_A 185 DMRSLAIMRE-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVA-TGVAGLFMETH 244 (288)
T ss_dssp CHHHHHHGGG-GSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHH-HCCSEEEEEEE
T ss_pred CHHHHHHHHh-cCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHH-cCCCEEEEeec
Confidence 8999999988 89999883 444332 23455565 59999999654
No 370
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.84 E-value=0.18 Score=45.17 Aligned_cols=125 Identities=11% Similarity=0.088 Sum_probs=82.6
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 95 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~ai~l 94 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLG----------ILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAMRRL 94 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEEST----------GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCc----------cCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHHHHH
Confidence 36778888777 5678999998872 223333334455566666665554 588888743 2467899999
Q ss_pred HHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC--CcEEE-e-----cCCCCHHHHHHHHH
Q 023070 96 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLA-N-----GNVRHMEDVQKCLE 157 (287)
Q Consensus 96 a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~--ipVi~-n-----GgI~s~~da~~~l~ 157 (287)
++.+++.|+|++.+..-... .+...-+++++.+.++++ +||+. | |---+++.+.++.+
T Consensus 95 a~~A~~~Gadavlv~~P~~~----~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPPSL----RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHTCSEEEECCCTTC----CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCC----CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 99999999999987532211 111123466788888877 99874 3 44457787777764
No 371
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=95.83 E-value=0.14 Score=47.12 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=72.8
Q ss_pred ccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCC-CEEEEeccCCCCcCCCCccccHHHHHH
Q 023070 53 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC-SLLAVHGRTRDEKDGKKFRADWNAIKA 131 (287)
Q Consensus 53 ~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~-~~I~vh~rt~~~~~~~~~~~~~~~i~~ 131 (287)
-||.=+++..++.++-+ .+.||.+|.... +.++....++.+.+.|. +.+.+|+.+.-+. .....|+..|..
T Consensus 140 IgS~~~~N~pLL~~va~-----~gKPViLStGma-Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPt--p~~~~nL~aI~~ 211 (385)
T 1vli_A 140 IASYEINHLPLLKYVAR-----LNRPMIFSTAGA-EISDVHEAWRTIRAEGNNQIAIMHCVAKYPA--PPEYSNLSVIPM 211 (385)
T ss_dssp ECGGGTTCHHHHHHHHT-----TCSCEEEECTTC-CHHHHHHHHHHHHTTTCCCEEEEEECSSSSC--CGGGCCTTHHHH
T ss_pred ECcccccCHHHHHHHHh-----cCCeEEEECCCC-CHHHHHHHHHHHHHCCCCcEEEEeccCCCCC--ChhhcCHHHHHH
Confidence 35666788887665533 589999997664 77888888888999998 6666786543222 122468899999
Q ss_pred HHhhC-CCcEEEecCCCC-HHHHHHHHHhcCcc
Q 023070 132 VKNAL-RIPVLANGNVRH-MEDVQKCLEETGCE 162 (287)
Q Consensus 132 i~~~~-~ipVi~nGgI~s-~~da~~~l~~~gad 162 (287)
+++.. ++||..++--.. ..-+..++. .||+
T Consensus 212 Lk~~f~~lpVG~SdHt~G~~~~~~AAvA-lGA~ 243 (385)
T 1vli_A 212 LAAAFPEAVIGFSDHSEHPTEAPCAAVR-LGAK 243 (385)
T ss_dssp HHHHSTTSEEEEEECCSSSSHHHHHHHH-TTCS
T ss_pred HHHHcCCCCEEeCCCCCCchHHHHHHHH-cCCC
Confidence 99998 899987764444 566666666 5898
No 372
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.82 E-value=0.22 Score=43.79 Aligned_cols=112 Identities=15% Similarity=0.113 Sum_probs=75.2
Q ss_pred EEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCC-cEEEEecCCC---
Q 023070 13 VQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVFP--- 87 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~-pv~vKiR~g~--- 87 (287)
+-+...|.-. |++++ .|+|.| + .|....++.- |+-..+.-..+.+...+++|++.++. +|.+.+..|.
T Consensus 20 ~~~tayDa~s----A~l~e~aG~d~i-l-vGdSl~~~~l-G~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 92 (275)
T 1o66_A 20 AMLTAYESSF----AALMDDAGVEML-L-VGDSLGMAVQ-GRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQ 92 (275)
T ss_dssp EEEECCSHHH----HHHHHHTTCCEE-E-ECTTHHHHTT-CCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSS
T ss_pred EEEeCcCHHH----HHHHHHcCCCEE-E-ECHHHHHHHc-CCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccC
Confidence 3455566543 55554 599998 4 3655555433 34555556777888888888887764 5777766542
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 142 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~ 142 (287)
+.+++++-+.++.++|+++|.+-+.. .-.+.|+.+.+. ++||++
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg~----------e~~~~I~al~~a-gIpV~g 136 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGGV----------WMAETTEFLQMR-GIPVCA 136 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECSG----------GGHHHHHHHHHT-TCCEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCcH----------HHHHHHHHHHHc-CCCeEe
Confidence 46778888889999999999997641 223567777653 789883
No 373
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.81 E-value=0.36 Score=43.08 Aligned_cols=127 Identities=11% Similarity=0.129 Sum_probs=73.1
Q ss_pred CHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEE--EEecCCCCh------
Q 023070 19 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVS--CKIRVFPNL------ 89 (287)
Q Consensus 19 ~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~--vKiR~g~~~------ 89 (287)
-|.....+++. .+.|+|.|.+|.. |+ ++.+...++...+.-..|.. |-+-...+.
T Consensus 88 IpnTv~~av~~~a~lGaD~vTVHa~-----------~G-----~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l 151 (303)
T 3ru6_A 88 IPNTMADACEEVSKLGVDMINIHAS-----------AG-----KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSI 151 (303)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEGG-----------GC-----HHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHH
T ss_pred CchhHHHHHHHHHhcCCCEEEEecc-----------CC-----HHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHH
Confidence 35555556654 4558999999842 21 33444455544332222221 211122221
Q ss_pred ------hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-CcEEEecCCCCHH----------HH
Q 023070 90 ------QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHME----------DV 152 (287)
Q Consensus 90 ------~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-ipVi~nGgI~s~~----------da 152 (287)
+....+++...+.|+++++..+ .+ ++.+++.++ -.++..+||+-.. +.
T Consensus 152 ~~~~~~e~V~~lA~~a~~~G~dGvV~s~------------~E---~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~ 216 (303)
T 3ru6_A 152 YRQKIEEAVINFSKISYENGLDGMVCSV------------FE---SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANL 216 (303)
T ss_dssp HSSCHHHHHHHHHHHHHHTTCSEEECCT------------TT---HHHHHHHSCTTSEEEECCCCTTC--------CCSH
T ss_pred HcCCHHHHHHHHHHHHHHcCCCEEEECH------------HH---HHHHHHhCCCccEEECCCcCcccCCcccccccCCH
Confidence 1234677778889999987631 12 345666553 4578889997221 34
Q ss_pred HHHHHhcCccEEEEehhhhhCccch
Q 023070 153 QKCLEETGCEGVLSAESLLENPALF 177 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~nP~lf 177 (287)
.++++ .|+|.+++||+++..++-.
T Consensus 217 ~~a~~-aGAd~iVvGr~I~~a~dp~ 240 (303)
T 3ru6_A 217 AMARE-NLSDYIVVGRPIYKNENPR 240 (303)
T ss_dssp HHHHH-TTCSEEEECHHHHTSSCHH
T ss_pred HHHHH-cCCCEEEEChHHhCCCCHH
Confidence 45555 5999999999999866543
No 374
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.78 E-value=0.17 Score=44.89 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCC-EEEEeccCCCCcC--CCCcc--ccHHHHHHHHh
Q 023070 62 PLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCS-LLAVHGRTRDEKD--GKKFR--ADWNAIKAVKN 134 (287)
Q Consensus 62 ~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~-~I~vh~rt~~~~~--~~~~~--~~~~~i~~i~~ 134 (287)
+.+.+.+...++.. +.|+.+-+. +.+.++..+.++.+.++|+| +|.+|-....... .+.+. .-++.++.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 77 DYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp HHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHH
Confidence 33333344433334 688887764 56778899999999999999 9999853222110 01001 12466778888
Q ss_pred hCCCcEEE--ecCCCCHHHH---HHHHHhcCccEEEEe
Q 023070 135 ALRIPVLA--NGNVRHMEDV---QKCLEETGCEGVLSA 167 (287)
Q Consensus 135 ~~~ipVi~--nGgI~s~~da---~~~l~~~gad~VmiG 167 (287)
.+++||++ +.++ +.+++ .+.+++.|+|+|.+.
T Consensus 156 ~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 156 FFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp TCCSCEEEEECCCC-SHHHHHHHHHHHTTSCCCEEEEC
T ss_pred hcCCCEEEEECCCC-CHHHHHHHHHHHHHcCCcEEEec
Confidence 88899874 5555 55554 445555799998763
No 375
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.77 E-value=0.19 Score=43.00 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=81.3
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC--
Q 023070 10 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-- 87 (287)
Q Consensus 10 p~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-- 87 (287)
+.++.++- ++++..+.++. .+.|.|.|| |. ..|+.+. .+++..++||.=-+|...
T Consensus 72 ~~~v~v~v-~~~ei~~~i~~--~~ld~vQLH-------------G~---E~~~~~~----~l~~~~~~~viKa~~v~~~~ 128 (228)
T 4aaj_A 72 VFLVSTMV-GFSEWAMAIER--TGAQYIQVH-------------SN---ALPQTID----TLKKEFGVFVMKAFRVPTIS 128 (228)
T ss_dssp EEEEECCC-CHHHHHHHHHH--HTCSEEEEC-------------SC---CCHHHHH----HHHHHHCCEEEEEEECCSSC
T ss_pred CEEEeccC-chHHHHHHHHh--ccchheecc-------------cc---cCHHHHH----HHhhccCceEEEEEEecccc
Confidence 34455544 46655444332 367999998 21 3455544 444455677764445432
Q ss_pred C--hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc-cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEE
Q 023070 88 N--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 88 ~--~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~-~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~V 164 (287)
+ .++...+...+....+|++.+... +++| ..||+.++.+.. +.|++..||+ +++.+.++++..+..||
T Consensus 129 ~~~~~~~~~~~~~~~~~~~d~~LlDs~------GGtG~~fDW~~~~~~~~--~~p~iLAGGL-~peNV~~Ai~~~~P~gV 199 (228)
T 4aaj_A 129 KNPEEDANRLLSEISRYNADMVLLDTG------AGSGKLHDLRVSSLVAR--KIPVIVAGGL-NAENVEEVIKVVKPYGV 199 (228)
T ss_dssp SCHHHHHHHHHHHHHHSCCSEEEEEC-------------CCCHHHHHHHH--HSCEEEESSC-CTTTHHHHHHHHCCSEE
T ss_pred cchhhhHHHHHHHHhccCCCEEccCCC------CCCcCcCChHHHHHhhh--cCCeEEECCC-CHHHHHHHHHHhCCCEE
Confidence 1 223444555666778999988632 1122 479998887765 4799999999 57999999987788888
Q ss_pred EEehhhh
Q 023070 165 LSAESLL 171 (287)
Q Consensus 165 miGR~~l 171 (287)
=+..|.=
T Consensus 200 DVsSGVE 206 (228)
T 4aaj_A 200 DVSSGVE 206 (228)
T ss_dssp EESGGGE
T ss_pred EeCCCCC
Confidence 8887763
No 376
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=95.76 E-value=0.06 Score=50.28 Aligned_cols=95 Identities=7% Similarity=0.038 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-
Q 023070 61 LPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR- 137 (287)
Q Consensus 61 ~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~- 137 (287)
++.-.+.++++++++ ++.+.+...-+|+.++++++++.+++.++.+| ++.- .+.||+..+++++.++
T Consensus 205 ~~~d~~~v~avrea~G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~i-------EqPl---~~~d~~~~~~l~~~~~~ 274 (415)
T 2p3z_A 205 IRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWI-------EECL---PPQQYEGYRELKRNAPA 274 (415)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEE-------ECCS---CTTCHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCceE-------eCCC---CcchHHHHHHHHHhcCC
Confidence 344556777777765 57788888888999999999999999988776 2211 1358899999998887
Q ss_pred -CcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 138 -IPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 138 -ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+||.+.-.+.+..++.++++.. +|.|.+
T Consensus 275 ~ipIa~dE~~~~~~~~~~~i~~~-~d~i~i 303 (415)
T 2p3z_A 275 GMMVTSGEHHGTLQSFRTLAETG-IDIMQP 303 (415)
T ss_dssp TCEEEECTTCCSHHHHHHHHHTT-CSEECC
T ss_pred CCcEEcCCCCCCHHHHHHHHHcC-CCEEEe
Confidence 8988888899999999999975 998876
No 377
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.75 E-value=0.21 Score=44.06 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=90.9
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C--
Q 023070 11 LFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-- 86 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g-- 86 (287)
+.+-++..+.++...| .+.|+|-|||+-+-.. + .+.-. ..+++.+++.+++||-+=+|. |
T Consensus 40 ~~lEvc~~s~~~a~~A---~~gGAdRIELc~~l~~-----G----GlTPS----~g~i~~a~~~~~ipV~vMIRPRgGdF 103 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNA---ERGGADRIELCSGLSE-----G----GTTPS----MGVLQVVKQSVQIPVFVMIRPRGGDF 103 (287)
T ss_dssp SEEEEEESSHHHHHHH---HHHTCSEEEECBCGGG-----T----CBCCC----HHHHHHHHTTCCSCEEEECCSSSSCS
T ss_pred ceEEEEeCCHHHHHHH---HHhCCCEEEECCCCCC-----C----CCCCC----HHHHHHHHHhcCCCeEEEEecCCCCc
Confidence 5688888888775544 3468999999832111 1 11222 244556666678999888887 2
Q ss_pred -CChh---hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh-CCCcEEEecC---CCCHHHHHHHHHh
Q 023070 87 -PNLQ---DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-LRIPVLANGN---VRHMEDVQKCLEE 158 (287)
Q Consensus 87 -~~~~---~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~-~~ipVi~nGg---I~s~~da~~~l~~ 158 (287)
.+.. ...+-++.+.++|++.|+++.=+.+. ..|.+.++++.+. -.++|...=- +.++..+.+.+..
T Consensus 104 ~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg------~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~ 177 (287)
T 3iwp_A 104 LYSDREIEVMKADIRLAKLYGADGLVFGALTEDG------HIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLT 177 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS------CBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC------CcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHH
Confidence 2222 23456777889999999998655442 4788888777655 3588887765 4568888777776
Q ss_pred cCccEEEEe
Q 023070 159 TGCEGVLSA 167 (287)
Q Consensus 159 ~gad~VmiG 167 (287)
.|+|.|..+
T Consensus 178 lGvdrILTS 186 (287)
T 3iwp_A 178 LGFERVLTS 186 (287)
T ss_dssp HTCSEEEEC
T ss_pred cCCCEEECC
Confidence 799999874
No 378
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=95.74 E-value=0.069 Score=46.88 Aligned_cols=109 Identities=21% Similarity=0.294 Sum_probs=71.4
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCC-ccccHHHHH
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIK 130 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~-~~~~~~~i~ 130 (287)
..|+..+++.+++.+ +. ..+.||.+|-...-+.++....++.+...|...+++.-|... +.++ ...|+..+.
T Consensus 99 ~IgA~~~rn~~ll~~----~a-~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~--~~y~~~~~dl~~i~ 171 (267)
T 2nwr_A 99 QIPAFLCRQTDLLLA----AA-KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTT--FGYNNLVVDFRSLP 171 (267)
T ss_dssp EECGGGTTCHHHHHH----HH-TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEE--CSSSCEECCTTHHH
T ss_pred EECcccccCHHHHHH----HH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCccccCHHHHH
Confidence 457888888885444 43 568999999776557778888888889999866655434322 1221 125777888
Q ss_pred HHHhhCCCcEEEe---------------cCCCC--HHHHHHHHHhcCccEEEEehhh
Q 023070 131 AVKNALRIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 131 ~i~~~~~ipVi~n---------------GgI~s--~~da~~~l~~~gad~VmiGR~~ 170 (287)
.+++. + ||++. +|-+. ..-+...+. .|+||+||=+-+
T Consensus 172 ~lk~~-~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava-~Ga~G~mIE~H~ 225 (267)
T 2nwr_A 172 IMKQW-A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVA-VGCDGVFMETHP 225 (267)
T ss_dssp HHTTT-S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHH-HCCSEEEEEEES
T ss_pred HHHHc-C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHH-cCCCEEEEEecC
Confidence 88876 6 99873 33211 223344454 699999997654
No 379
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=95.71 E-value=0.057 Score=48.54 Aligned_cols=90 Identities=14% Similarity=0.235 Sum_probs=57.9
Q ss_pred HHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEE
Q 023070 65 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 141 (287)
Q Consensus 65 ~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi 141 (287)
.+.++++++.. ..++.|-+. +. +-++.+.++|+|.|-+... +.+.++++.+.+ ++++.
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVd---tl----dea~eAl~aGaD~I~LDn~------------~~~~l~~av~~l~~~v~ie 279 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETE---TL----AELEEAISAGADIIMLDNF------------SLEMMREAVKINAGRAALE 279 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEES---SH----HHHHHHHHTTCSEEEEESC------------CHHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEC---CH----HHHHHHHHcCCCEEEECCC------------CHHHHHHHHHHhCCCCeEE
Confidence 34455555443 345555432 22 3344555689999988632 234555555543 68999
Q ss_pred EecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 142 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 142 ~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++|||. ++.+.++.+ +|+|.+.+|.-...-|+
T Consensus 280 aSGGIt-~~~I~~~a~-tGVD~isvGalt~sa~~ 311 (320)
T 3paj_A 280 NSGNIT-LDNLKECAE-TGVDYISVGALTKHLKA 311 (320)
T ss_dssp EESSCC-HHHHHHHHT-TTCSEEECTHHHHSBCC
T ss_pred EECCCC-HHHHHHHHH-cCCCEEEECceecCCCc
Confidence 999994 788887776 79999999975443443
No 380
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.70 E-value=0.17 Score=44.82 Aligned_cols=162 Identities=15% Similarity=0.225 Sum_probs=92.5
Q ss_pred CCCCEEEEecC------CCHHHHHHHHH-HHcC-CCC-EEEEec-cCCh-h---hhhcCccccccc--------CChHHH
Q 023070 7 EDRPLFVQFCA------NDPEILLNAAR-RVEP-YCD-YVDINL-GCPQ-R---IARRGNYGAFLM--------DNLPLV 64 (287)
Q Consensus 7 ~~~p~~~Qi~g------~~~~~~~~aA~-~~~~-g~d-~IdiN~-gcP~-~---~~~~~~~G~~l~--------~~~~~~ 64 (287)
...|+|+|+.- ...+.+...++ +++. .++ =|-||+ .|.. . ...+.+|.|-+. .+.+..
T Consensus 44 ~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~T 123 (288)
T 3q94_A 44 EKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETT 123 (288)
T ss_dssp TTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHH
T ss_pred hCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHH
Confidence 45799999863 23344444444 3331 222 255554 2322 1 222344544333 233455
Q ss_pred HHHHHHHhhccCCcEEEEecC--CC-C--------hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHH
Q 023070 65 KSLVEKLALNLNVPVSCKIRV--FP-N--------LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK 133 (287)
Q Consensus 65 ~~iv~~v~~~~~~pv~vKiR~--g~-~--------~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~ 133 (287)
+++++... ..++.|-.-+.. |. + ..++.+..+.+++.|+|.+.+.=.|.-+.+......|++.+++++
T Consensus 124 k~vv~~ah-~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~ 202 (288)
T 3q94_A 124 KKVVEYAH-ARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVR 202 (288)
T ss_dssp HHHHHHHH-TTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHH
T ss_pred HHHHHHHH-HcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHH
Confidence 55555543 235555554432 11 0 123445555566899999977433333222222357899999999
Q ss_pred hhCCCcEEEecCCCC-HHHHHHHHHhcCccEEEEehhh
Q 023070 134 NALRIPVLANGNVRH-MEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 134 ~~~~ipVi~nGgI~s-~~da~~~l~~~gad~VmiGR~~ 170 (287)
+.+++|++.-||=.. .+++.++++ .|+--|=|++.+
T Consensus 203 ~~v~vpLVlHGgSG~~~e~i~~ai~-~Gv~KiNi~Tdl 239 (288)
T 3q94_A 203 DFTGVPLVLHGGTGIPTADIEKAIS-LGTSKINVNTEN 239 (288)
T ss_dssp HHHCSCEEECCCTTCCHHHHHHHHH-TTEEEEEECHHH
T ss_pred HhcCCCEEEeCCCCCCHHHHHHHHH-cCCeEEEEChHH
Confidence 999999998886443 466788887 689888888765
No 381
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.69 E-value=0.023 Score=54.05 Aligned_cols=70 Identities=19% Similarity=0.299 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
...+.++.+.++|++.|.+++-. +. ....|+.++.+++.+ ++||+ .|+|.+.+++..+++ .|+|+|.+|.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~-----g~-~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~-~Gad~I~vg~ 303 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAH-----GH-SAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYD-AGVDVVKVGI 303 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSC-----TT-CHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHH-TTCSEEEECS
T ss_pred hHHHHHHHHHHcCCCeEEEeeec-----Cc-chhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHH-cCCCEEEECc
Confidence 34677888999999999998621 11 124578889999887 89999 899999999998888 6999999984
No 382
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=95.68 E-value=0.17 Score=44.73 Aligned_cols=124 Identities=10% Similarity=-0.049 Sum_probs=81.5
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a 96 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.++- |.+-+. +.+..++++++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~la 84 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNG----------TTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVMELV 84 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHHHH
Confidence 37778888777 5678999998872 23444444566668888888877644 655532 23568899999
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHH
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKC 155 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~ 155 (287)
+.+++.|+|++-+..-..... .+...-+++++.+.+++++||+ +| .|+ -+++.+.++
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 85 KFSNEMDILGVSSHSPYYFPR--LPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHTSCCSEEEECCCCSSCS--CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHhcCCCEEEEcCCcCCCC--CCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 999999999997753322110 0111224667788888899986 44 243 466666554
No 383
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.67 E-value=0.11 Score=46.36 Aligned_cols=158 Identities=13% Similarity=0.103 Sum_probs=92.8
Q ss_pred EEecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC-Chh
Q 023070 13 VQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQ 90 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-~~~ 90 (287)
+=+...|+-. |+++ +.|||+|=+-=. ...... |+-....-..+.+...+++|.+.++.||.+.+-.|+ +..
T Consensus 32 ~~~~ayD~~s----A~l~e~aG~dai~vs~~-s~a~~~--G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~ 104 (305)
T 3ih1_A 32 QIPGAHDAMA----ALVARNTGFLALYLSGA-AYTASK--GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVL 104 (305)
T ss_dssp EEEBCSSHHH----HHHHHHTTCSCEEECHH-HHHHHH--TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHH
T ss_pred EEecCcCHHH----HHHHHHcCCCEEEECcH-HHHHhC--CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHH
Confidence 3344455543 4444 358888877520 111111 233333345666677777787778899999998875 445
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCC---Ccccc----HHHHHHHHhhCCCcEEEecCCCCH-----HH----HHH
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGK---KFRAD----WNAIKAVKNALRIPVLANGNVRHM-----ED----VQK 154 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~---~~~~~----~~~i~~i~~~~~ipVi~nGgI~s~-----~d----a~~ 154 (287)
+..+.++.++++|+.+|.+-+.....+-+. ..-.+ .+.|+.++++ +.+++.++..... ++ +..
T Consensus 105 ~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~a 183 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANA 183 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHH
Confidence 677888999999999999977653221110 00112 2345555555 5666666665543 22 222
Q ss_pred HHHhcCccEEEEehhhhhCccchhchh
Q 023070 155 CLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+. +.|||+|++= .+.++..++++.
T Consensus 184 y~-eAGAD~i~~e--~~~~~~~~~~i~ 207 (305)
T 3ih1_A 184 YV-KAGADAIFPE--ALQSEEEFRLFN 207 (305)
T ss_dssp HH-HHTCSEEEET--TCCSHHHHHHHH
T ss_pred HH-HcCCCEEEEc--CCCCHHHHHHHH
Confidence 33 3699999982 334556666554
No 384
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.67 E-value=0.062 Score=45.61 Aligned_cols=129 Identities=12% Similarity=0.142 Sum_probs=76.7
Q ss_pred EEEEecCCCHHHHHHHHHHH-cCCCCEEEEec--cCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC
Q 023070 11 LFVQFCANDPEILLNAARRV-EPYCDYVDINL--GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 87 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~--gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~ 87 (287)
++..|.+.|++.+.+.++.+ +.|+|.|++-+ |.-.++ .....++++++++.++.|+.+-+-..
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~-------------~~~~~~~i~~l~~~~~~~~~v~l~vn- 78 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN-------------ITIGPLVVDSLRPITDLPLDVHLMIV- 78 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC-------------BCCCHHHHHHHGGGCCSCEEEEEESS-
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccc-------------cccCHHHHHHHHhccCCcEEEEEEec-
Confidence 67888999999999988865 56899888863 110011 11113666777776666665554221
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEecc--CCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGR--TRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~r--t~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+..++++.+.++|+++|++|+- ... ...+.++.+++. ++.++..=.-.++.+..+.+. .++|.|.
T Consensus 79 ---d~~~~v~~~~~~Gad~v~vh~~~~~~~--------~~~~~~~~~~~~-g~~ig~~~~p~t~~e~~~~~~-~~~d~vl 145 (230)
T 1rpx_A 79 ---EPDQRVPDFIKAGADIVSVHCEQSSTI--------HLHRTINQIKSL-GAKAGVVLNPGTPLTAIEYVL-DAVDLVL 145 (230)
T ss_dssp ---SHHHHHHHHHHTTCSEEEEECSTTTCS--------CHHHHHHHHHHT-TSEEEEEECTTCCGGGGTTTT-TTCSEEE
T ss_pred ---CHHHHHHHHHHcCCCEEEEEecCccch--------hHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHH-hhCCEEE
Confidence 2445777888999999999965 321 113556666553 444443321224333333333 3799885
Q ss_pred E
Q 023070 166 S 166 (287)
Q Consensus 166 i 166 (287)
+
T Consensus 146 ~ 146 (230)
T 1rpx_A 146 I 146 (230)
T ss_dssp E
T ss_pred E
Confidence 3
No 385
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=95.67 E-value=0.028 Score=52.80 Aligned_cols=72 Identities=11% Similarity=0.180 Sum_probs=57.3
Q ss_pred CCCChhhHHHHHHHHHH-cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEec-CCCCHHHHHHHHHhcC
Q 023070 85 VFPNLQDTIKYAKMLED-AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANG-NVRHMEDVQKCLEETG 160 (287)
Q Consensus 85 ~g~~~~~~~~~a~~l~~-~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nG-gI~s~~da~~~l~~~g 160 (287)
.+|+.++++++++.+++ .++.+| ++.- .+.||+..+++++.+ ++||.+.- -+.++.++.++++...
T Consensus 265 ~~~t~~~ai~~~~~L~~~~~i~~i-------EePl---~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a 334 (431)
T 2fym_A 265 KAFTSEEFTHFLEELTKQYPIVSI-------EDGL---DESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGI 334 (431)
T ss_dssp EEECHHHHHHHHHHHHHHSCEEEE-------ESCS---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCceEE-------ECCC---CcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCC
Confidence 45788889999999988 775444 2211 145899999999988 89998877 7899999999999888
Q ss_pred ccEEEE
Q 023070 161 CEGVLS 166 (287)
Q Consensus 161 ad~Vmi 166 (287)
+|.|++
T Consensus 335 ~d~i~i 340 (431)
T 2fym_A 335 ANSILI 340 (431)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999988
No 386
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.66 E-value=0.055 Score=45.56 Aligned_cols=83 Identities=22% Similarity=0.312 Sum_probs=62.2
Q ss_pred CcEEEEecCCC---ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE-------ecCC
Q 023070 77 VPVSCKIRVFP---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-------NGNV 146 (287)
Q Consensus 77 ~pv~vKiR~g~---~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~-------nGgI 146 (287)
+-|+|-...+. +...+.++++.++++|++++.+. ..+.++.+++.+++|+++ .+++
T Consensus 7 ~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~--------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~ 72 (223)
T 1y0e_A 7 LIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN--------------TKEDILAIKETVDLPVIGIVKRDYDHSDV 72 (223)
T ss_dssp EEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE--------------SHHHHHHHHHHCCSCEEEECBCCCTTCCC
T ss_pred eEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC--------------CHHHHHHHHHhcCCCEEeeeccCCCcccc
Confidence 44555554443 34567899999999999998662 136688999999999974 3455
Q ss_pred ---CCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 147 ---RHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 147 ---~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
.+.+++..+++ .|+|.|.++.....+|
T Consensus 73 ~i~~~~~~i~~~~~-~Gad~v~l~~~~~~~p 102 (223)
T 1y0e_A 73 FITATSKEVDELIE-SQCEVIALDATLQQRP 102 (223)
T ss_dssp CBSCSHHHHHHHHH-HTCSEEEEECSCSCCS
T ss_pred ccCCcHHHHHHHHh-CCCCEEEEeeecccCc
Confidence 56778888877 5999999998887777
No 387
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=95.66 E-value=0.18 Score=44.48 Aligned_cols=122 Identities=19% Similarity=0.100 Sum_probs=79.8
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 97 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~ 97 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.++- |.+-+. +.+..+++++++
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~la~ 84 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAG----------TTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIALAK 84 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHHHHH
Confidence 7777888777 5678999998872 23334444555567777777766643 665542 235688999999
Q ss_pred HHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHH
Q 023070 98 MLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQK 154 (287)
Q Consensus 98 ~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~ 154 (287)
.+++.|+|++-+..-.... ..+...-+++++.+.+++++||+ +| .|+ -+++.+.+
T Consensus 85 ~A~~~Gadavlv~~P~y~~--~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 85 YAESRGAEAVASLPPYYFP--RLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHTTCSEEEECCSCSST--TCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHhcCCCEEEEcCCcCCC--CCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 9999999999876332211 00111224667788888899986 44 233 46777766
No 388
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.65 E-value=0.12 Score=49.48 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=62.7
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCC-----------------------C--cC--C---------
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD-----------------------E--KD--G--------- 119 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~-----------------------~--~~--~--------- 119 (287)
+.|.++.+-.+.+.+...+++++++++|+++|.||--... . .. .
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~ 325 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKF 325 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTT
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhc
Confidence 3566666654555566678888899999998877621110 0 00 0
Q ss_pred CCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 120 KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 120 ~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
......|+.++.+++.+++||++- |+.+++++..+.+ .|+|+|.++
T Consensus 326 ~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~-aGad~I~vs 371 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKKTKLPIVIK-GVQRTEDVIKAAE-IGVSGVVLS 371 (511)
T ss_dssp BCTTCCHHHHHHHHHHCSSCEEEE-EECSHHHHHHHHH-TTCSEEEEC
T ss_pred cChHhHHHHHHHHHHHhCCcEEEE-eCCCHHHHHHHHH-cCCCEEEEc
Confidence 011235899999999999999986 4667999988877 699999983
No 389
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.64 E-value=0.025 Score=54.18 Aligned_cols=70 Identities=16% Similarity=0.314 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
+..+.++.+.++|++.|.+|.... .+ ...++.++.+++.+ ++||++ |++.+.+++..+.+ .|+|+|.+|.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G-----~~-~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~-aGad~I~vg~ 325 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQG-----NS-VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLID-AGVDGLRVGM 325 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC-----CS-HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHH-HTCSEEEECS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCC-----cc-hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHH-cCCCEEEECC
Confidence 456778889999999999975421 11 23468899999988 899986 78999999998887 5999998854
No 390
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=95.63 E-value=0.068 Score=49.81 Aligned_cols=98 Identities=11% Similarity=0.116 Sum_probs=75.0
Q ss_pred HHHHHHHHhhcc--CCcEEEEecC------CCChhhHHHHHHHHHHcCCCE-EEEeccCCCCcCC-CCccccHHHHHHHH
Q 023070 64 VKSLVEKLALNL--NVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSL-LAVHGRTRDEKDG-KKFRADWNAIKAVK 133 (287)
Q Consensus 64 ~~~iv~~v~~~~--~~pv~vKiR~------g~~~~~~~~~a~~l~~~G~~~-I~vh~rt~~~~~~-~~~~~~~~~i~~i~ 133 (287)
..+.+++|++.+ ++.+.+...- +|+.++++++++.+++.|+.. +-+ ++.-. ...+.||+.+++++
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~~L~~~~~~~~l~i-----EqP~~~~~~~~d~~~~~~l~ 292 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYI-----EGPVDAGNKPDQIRMLTAIT 292 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEE-----ECCCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHHHHHhccCCcceEE-----ECCcCCCCCcccHHHHHHHH
Confidence 447888998877 4777787777 789999999999999976541 111 21110 00035888899999
Q ss_pred hh-----CCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 134 NA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 134 ~~-----~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+. +++||.+.=.+.+++++.++++...+|.|.+
T Consensus 293 ~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 330 (413)
T 1kko_A 293 KELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQI 330 (413)
T ss_dssp HHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 88 8899999889999999999999878999988
No 391
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.61 E-value=0.059 Score=47.79 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=67.5
Q ss_pred HHHHHHHhh-ccCCcEEEEecCCCChhhHHHHHHHHHH-cCCCEEEEeccCCCCcC---CCCcc--ccHHHHHHHHhhCC
Q 023070 65 KSLVEKLAL-NLNVPVSCKIRVFPNLQDTIKYAKMLED-AGCSLLAVHGRTRDEKD---GKKFR--ADWNAIKAVKNALR 137 (287)
Q Consensus 65 ~~iv~~v~~-~~~~pv~vKiR~g~~~~~~~~~a~~l~~-~G~~~I~vh~rt~~~~~---~~~~~--~~~~~i~~i~~~~~ 137 (287)
.++++.+++ ..+.|+.+-+.. .+.++..+.++.+.+ .|+|+|.+|-....... .+... .-.+.++.+++.++
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~ 164 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSK 164 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcC
Confidence 335566665 337888887753 356778888888888 99999999843221100 00001 12577888888888
Q ss_pred CcEEE--ecCCCCHHHHHHHHHhcCccEEEE
Q 023070 138 IPVLA--NGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 138 ipVi~--nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+||++ +.++.+..++.+.+++.|+|+|.+
T Consensus 165 ~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 165 VPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp SCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 99875 346777777656666689999988
No 392
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.60 E-value=0.035 Score=46.50 Aligned_cols=89 Identities=16% Similarity=0.221 Sum_probs=64.3
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcE-EEecCCCCHHHHHH
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPV-LANGNVRHMEDVQK 154 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipV-i~nGgI~s~~da~~ 154 (287)
..|+..-++ +.+.++..+.++.+.+.|++.|.+...+ +...+.++++++..++|+ ++.|++.+.+++..
T Consensus 6 ~~~i~~~i~-~~d~~~~~~~~~~~~~~G~~~i~l~~~~---------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~ 75 (212)
T 2v82_A 6 KLPLIAILR-GITPDEALAHVGAVIDAGFDAVEIPLNS---------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDA 75 (212)
T ss_dssp SSCEEEECT-TCCHHHHHHHHHHHHHHTCCEEEEETTS---------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHH
T ss_pred CCCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEeCCC---------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHH
Confidence 456655554 4567888999999999999999885332 123567777777666664 46688999999998
Q ss_pred HHHhcCccEEEEehhhhhCccchh
Q 023070 155 CLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 155 ~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
+++ .|+|+|.+|. .++.+..
T Consensus 76 a~~-~Gad~V~~~~---~~~~~~~ 95 (212)
T 2v82_A 76 LAR-MGCQLIVTPN---IHSEVIR 95 (212)
T ss_dssp HHH-TTCCEEECSS---CCHHHHH
T ss_pred HHH-cCCCEEEeCC---CCHHHHH
Confidence 888 6999998764 2444443
No 393
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.60 E-value=0.023 Score=54.39 Aligned_cols=70 Identities=20% Similarity=0.323 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+..+.++.+.++|++.|.++..... ....++.++++++.. ++||++ |++.+.+++..+.+ .|||+|.+|
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~-aGaD~I~Vg 300 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIE-AGVSAVKVG 300 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHH-HTCSEEEEC
T ss_pred cchHHHHHHHHhccCceEEecccccc------chHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHH-hCCCEEEEC
Confidence 34567788999999999999854321 123468899999887 789988 88999999998887 599999986
No 394
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=95.57 E-value=0.18 Score=42.99 Aligned_cols=136 Identities=9% Similarity=-0.012 Sum_probs=77.3
Q ss_pred CEEEEecCC-CHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC---
Q 023070 10 PLFVQFCAN-DPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--- 85 (287)
Q Consensus 10 p~~~Qi~g~-~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--- 85 (287)
+++.=+=-+ -|.....+++.+... |.+.+|.. |+. .+.+...++...+. +.-|++=..+
T Consensus 55 ~VflDlK~~DI~nTv~~~~~~~~~~-d~vTVh~~-----------~G~----~~~~~~a~~~~~~~-~~~v~vLts~s~~ 117 (222)
T 4dbe_A 55 EIIVDFKLADIGYIMKSIVERLSFA-NSFIAHSF-----------IGV----KGSLDELKRYLDAN-SKNLYLVAVMSHE 117 (222)
T ss_dssp EEEEEEEECSCHHHHHHHHTTCTTC-SEEEEEST-----------TCT----TTTHHHHHHHHHHT-TCEEEEEEECSST
T ss_pred eEEEEeeecchHHHHHHHHHHHHhC-CEEEEEcC-----------cCc----HHHHHHHHHHHHhc-CCcEEEEEeCCCc
Confidence 455444333 345555555544334 89999842 220 12233334433221 2334433233
Q ss_pred CCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHH-HHHHHHHhcCccEE
Q 023070 86 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHME-DVQKCLEETGCEGV 164 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~-da~~~l~~~gad~V 164 (287)
++.......+++...++|++++++.+. .-+.++.+++.++-.++..+||+--. +..++++ .|+|.+
T Consensus 118 ~~~~~~~~~~a~~a~~~g~~GvV~sat------------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~-~Gad~i 184 (222)
T 4dbe_A 118 GWSTLFADYIKNVIREISPKGIVVGGT------------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVC-AGADYE 184 (222)
T ss_dssp TCCCTTHHHHHHHHHHHCCSEEEECTT------------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHH-HTCSEE
T ss_pred chHHHHHHHHHHHHHHhCCCEEEECCC------------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHH-cCCCEE
Confidence 221223467888889999999977532 11345666666543677889887421 4555666 599999
Q ss_pred EEehhhhhCcc
Q 023070 165 LSAESLLENPA 175 (287)
Q Consensus 165 miGR~~l~nP~ 175 (287)
+|||+++.-++
T Consensus 185 VVGR~I~~A~d 195 (222)
T 4dbe_A 185 IIGRSIYNAGN 195 (222)
T ss_dssp EECHHHHTSSS
T ss_pred EECHHhcCCCC
Confidence 99999997554
No 395
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.56 E-value=0.15 Score=44.86 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=90.9
Q ss_pred HHHHc-CCCCEEEEe-ccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC--ChhhHHHHHHHHHHc
Q 023070 27 ARRVE-PYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP--NLQDTIKYAKMLEDA 102 (287)
Q Consensus 27 A~~~~-~g~d~IdiN-~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~--~~~~~~~~a~~l~~~ 102 (287)
|++++ .|||+|=+- .+.- . .-|+-....-..+.+...+++|.+.++.||++.+-.|+ +..+..+.++.+.++
T Consensus 29 A~~~~~aG~~ai~vsg~s~a--~--~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~a 104 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIA--H--ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAAL 104 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHH--H--HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECcHHHH--H--hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHc
Confidence 44443 489888775 2211 1 12333333456677778888888888999999999985 456888999999999
Q ss_pred CCCEEEEeccCCC-CcCCCCccccHHHHHHHHhh---CCCcEEEecCCCC--------H-HHHHHHH------HhcCccE
Q 023070 103 GCSLLAVHGRTRD-EKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRH--------M-EDVQKCL------EETGCEG 163 (287)
Q Consensus 103 G~~~I~vh~rt~~-~~~~~~~~~~~~~i~~i~~~---~~ipVi~nGgI~s--------~-~da~~~l------~~~gad~ 163 (287)
|+.+|.+-+.... .+.-.+...-.+.|+.+++. .++|+..+|.... + +.+.+++ .+.|||+
T Consensus 105 Gaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~ 184 (275)
T 2ze3_A 105 GVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADG 184 (275)
T ss_dssp TCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSE
T ss_pred CCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCE
Confidence 9999999765431 11111101112445555444 2678777775544 1 2233333 3369999
Q ss_pred EEEehhhhhCccchhchh
Q 023070 164 VLSAESLLENPALFAGFR 181 (287)
Q Consensus 164 VmiGR~~l~nP~lf~~~~ 181 (287)
|++= .+.++...+++.
T Consensus 185 i~~e--~~~~~~~~~~i~ 200 (275)
T 2ze3_A 185 IFVP--LALQSQDIRALA 200 (275)
T ss_dssp EECT--TCCCHHHHHHHH
T ss_pred EEEC--CCCCHHHHHHHH
Confidence 9883 245556666554
No 396
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=95.54 E-value=0.21 Score=44.26 Aligned_cols=123 Identities=16% Similarity=-0.015 Sum_probs=81.2
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a 96 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.++- |.+-+. +.+..++++++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~la 84 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNG----------TTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIRLA 84 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHHHH
Confidence 36777888777 5677999998872 23434444566667888888777644 665542 24568899999
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHH
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQK 154 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~ 154 (287)
+.+++.|+|++-+..-..... .+...-+++++.+.+++++||+ +| .|+ -+++.+.+
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 85 KLSKDFDIVGIASYAPYYYPR--MSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHGGGSCCSEEEEECCCSCSS--CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCCCC--CCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 999999999997763322110 0111224667788888899986 44 243 47777766
No 397
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=95.54 E-value=0.11 Score=45.85 Aligned_cols=105 Identities=21% Similarity=0.263 Sum_probs=68.8
Q ss_pred CHHHHHH-HHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC-----------
Q 023070 19 DPEILLN-AARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV----------- 85 (287)
Q Consensus 19 ~~~~~~~-aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~----------- 85 (287)
++++..+ |.++++ .|+++|.|=-| ....+.|+++.++ ++||.--+.+
T Consensus 110 s~~~a~~na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf 169 (281)
T 1oy0_A 110 GPTAALAAATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGF 169 (281)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC---------
T ss_pred CHHHHHHHHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCe
Confidence 6777666 556666 69999998632 1234444555433 6887632222
Q ss_pred ---CCC--hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcC
Q 023070 86 ---FPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETG 160 (287)
Q Consensus 86 ---g~~--~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~g 160 (287)
|-+ .+++++-++.++++|++.|.+.+.. -+..+++.+.+++|+|+-|.= .+
T Consensus 170 ~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp------------~~~a~~it~~l~iP~igIGaG------------~~ 225 (281)
T 1oy0_A 170 RVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVP------------AELATQITGKLTIPTVGIGAG------------PN 225 (281)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCSEEEEESCC------------HHHHHHHHHHCSSCEEEESSC------------SC
T ss_pred EEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHhCCCCEEEeCCC------------CC
Confidence 112 2456777888999999999997541 156788999999999987642 36
Q ss_pred ccEEEEe
Q 023070 161 CEGVLSA 167 (287)
Q Consensus 161 ad~VmiG 167 (287)
|||-++-
T Consensus 226 ~dgQvLV 232 (281)
T 1oy0_A 226 CDGQVLV 232 (281)
T ss_dssp SSEEEEC
T ss_pred CCcceee
Confidence 8886543
No 398
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.49 E-value=0.11 Score=44.09 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=65.7
Q ss_pred HHHHHHHhhccCCcEEEEecCCC---Chh--hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCc
Q 023070 65 KSLVEKLALNLNVPVSCKIRVFP---NLQ--DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 139 (287)
Q Consensus 65 ~~iv~~v~~~~~~pv~vKiR~g~---~~~--~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ip 139 (287)
.++++.+ .-++++++....+. +.+ +..++++.+++.|++++.+. ..+.++.+++.+++|
T Consensus 8 ~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~--------------~~~~i~~i~~~~~~p 71 (234)
T 1yxy_A 8 EKLMEQL--KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN--------------SVRDIKEIQAITDLP 71 (234)
T ss_dssp HHHHHHH--TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE--------------SHHHHHHHHTTCCSC
T ss_pred HHHHHHH--hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC--------------CHHHHHHHHHhCCCC
Confidence 3466666 33566666654321 245 77899999999999998763 125688898889999
Q ss_pred EEEe-------cCC---CCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 140 VLAN-------GNV---RHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 140 Vi~n-------GgI---~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
+++. +++ .+.+++..+++ .|+|.|.++-....+|
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~~~i~~~~~-~Gad~V~l~~~~~~~~ 115 (234)
T 1yxy_A 72 IIGIIKKDYPPQEPFITATMTEVDQLAA-LNIAVIAMDCTKRDRH 115 (234)
T ss_dssp EEEECBCCCTTSCCCBSCSHHHHHHHHT-TTCSEEEEECCSSCCT
T ss_pred EEeeEcCCCCccccccCChHHHHHHHHH-cCCCEEEEcccccCCC
Confidence 9641 222 35577777776 6999999998887777
No 399
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=95.48 E-value=0.048 Score=51.56 Aligned_cols=117 Identities=14% Similarity=0.036 Sum_probs=87.0
Q ss_pred cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEE
Q 023070 31 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLA 108 (287)
Q Consensus 31 ~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~ 108 (287)
+.||..+.+.++.... .|. .+++.-.+.++++|+++ ++++.+...-+|+..+++++++.+++.++.+|
T Consensus 178 ~~Gf~~~KlKv~~~~~------~G~---~~~~~di~rv~avRea~G~d~~L~vDaN~~wt~~~Ai~~~~~Le~~~l~~i- 247 (455)
T 3fxg_A 178 AMGFWGGKVPLPFCPD------DGH---EGLRKNVEFLRKHREAVGPDFPIMVDCYMSLNVSYTIELVKACLDLNINWW- 247 (455)
T ss_dssp HHTCSCEEEECCCCGG------GHH---HHHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHTGGGCCSEE-
T ss_pred HcCCCEEEEcCCCCcc------ccc---ccHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHhcccCCccee-
Confidence 4588888777542110 011 23455667788888877 58899998889999999999999999998777
Q ss_pred EeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 109 VHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 109 vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++.- .+.|++.++++++.+ .+||.+.=.+.+..++.++++...+|.|++
T Consensus 248 ------EEPl---~~dd~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~ 297 (455)
T 3fxg_A 248 ------EECL---SPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQP 297 (455)
T ss_dssp ------ECCS---CGGGGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECC
T ss_pred ------cCCC---CcchHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEE
Confidence 2211 134677888898876 488888888999999999998778888876
No 400
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=95.47 E-value=0.05 Score=48.24 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=58.2
Q ss_pred HHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEE
Q 023070 65 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 141 (287)
Q Consensus 65 ~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi 141 (287)
.+.++++++.. ..++.|-+. +. +-++.+.++|+|.|-+..- +.+.++++.+.+ ++++.
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~---tl----~ea~eAl~aGaD~I~LDn~------------~~~~l~~av~~~~~~v~ie 246 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVT---NL----DELNQAIAAKADIVMLDNF------------SGEDIDIAVSIARGKVALE 246 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEES---SH----HHHHHHHHTTCSEEEEESC------------CHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeC---CH----HHHHHHHHcCCCEEEEcCC------------CHHHHHHHHHhhcCCceEE
Confidence 34455555432 456666432 22 3345566789999988732 124455554443 68999
Q ss_pred EecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 142 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 142 ~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++||| +++.+.++.+ +|+|.+.+|.-...-|+
T Consensus 247 aSGGI-t~~~i~~~a~-tGVD~IsvGalt~sa~~ 278 (287)
T 3tqv_A 247 VSGNI-DRNSIVAIAK-TGVDFISVGAITKHIKA 278 (287)
T ss_dssp EESSC-CTTTHHHHHT-TTCSEEECSHHHHSBCC
T ss_pred EECCC-CHHHHHHHHH-cCCCEEEEChhhcCCcc
Confidence 99999 5688888777 79999999865554444
No 401
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=95.46 E-value=0.041 Score=50.61 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=57.1
Q ss_pred ccCCcEEEEecC----C-CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccc-----cHHHHHHHHhhCCCcEEEe
Q 023070 74 NLNVPVSCKIRV----F-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA-----DWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 74 ~~~~pv~vKiR~----g-~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~-----~~~~i~~i~~~~~ipVi~n 143 (287)
+.+.|+..-+.. + ++.+...+.++ ..+++++.+|=-....--...+.. .++.++.+++.+++||++=
T Consensus 117 ap~~~~~anlg~~ql~~~~~~~~~~~av~---~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK 193 (368)
T 3vkj_A 117 APTIPIIANLGMPQLVKGYGLKEFQDAIQ---MIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVK 193 (368)
T ss_dssp CSSSCEEEEEEGGGGGTTCCHHHHHHHHH---HTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEE
T ss_pred CcCcceecCcCeeecCCCCCHHHHHHHHH---HhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 446788777665 3 55554444343 446777777722110000001112 4678999999999999984
Q ss_pred --cCCCCHHHHHHHHHhcCccEEEE
Q 023070 144 --GNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 144 --GgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+-.+++++..+.+ .|+|+|.+
T Consensus 194 ~vG~g~s~~~A~~l~~-aGad~I~V 217 (368)
T 3vkj_A 194 ESGNGISMETAKLLYS-YGIKNFDT 217 (368)
T ss_dssp CSSSCCCHHHHHHHHH-TTCCEEEC
T ss_pred eCCCCCCHHHHHHHHh-CCCCEEEE
Confidence 55568999998887 69999988
No 402
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=95.44 E-value=0.38 Score=43.70 Aligned_cols=126 Identities=18% Similarity=0.119 Sum_probs=81.4
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a 96 (287)
=|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++. ...-.+||.+-+.. .+..++++++
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg~-~st~eai~la 111 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCG----------SMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTGA-VNTASAVAHA 111 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESS----------GGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECCC-SSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc----------cCcChhhCCHHHHHHHHHH-HhCCCCcEEEecCC-CCHHHHHHHH
Confidence 36677877777 5678999998872 2233333344444566665 22236899888532 4568899999
Q ss_pred HHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHh-hCCCcEE-Ee----cCCCCHHHHHHH-HH
Q 023070 97 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALRIPVL-AN----GNVRHMEDVQKC-LE 157 (287)
Q Consensus 97 ~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~-~~~ipVi-~n----GgI~s~~da~~~-l~ 157 (287)
+.+++.|+|++.+..-..... .+...-+++++.|.+ ++++||+ +| |---+++.+.++ .+
T Consensus 112 ~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~ 177 (344)
T 2hmc_A 112 VHAQKVGAKGLMVIPRVLSRG--SVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAE 177 (344)
T ss_dssp HHHHHHTCSEEEECCCCSSST--TCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCCccCCC--CCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhc
Confidence 999999999997753222110 001123467788888 7899976 45 433578888887 54
No 403
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=95.41 E-value=0.1 Score=48.88 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=70.1
Q ss_pred CChHHHHHHHHHHhhc---c--CCcEEEEec--------------CCCChhhHHHHHHH-HHHcCCCEEEEeccCCCCcC
Q 023070 59 DNLPLVKSLVEKLALN---L--NVPVSCKIR--------------VFPNLQDTIKYAKM-LEDAGCSLLAVHGRTRDEKD 118 (287)
Q Consensus 59 ~~~~~~~~iv~~v~~~---~--~~pv~vKiR--------------~g~~~~~~~~~a~~-l~~~G~~~I~vh~rt~~~~~ 118 (287)
.+.+.+.-++++|+++ + ++.+.+..- -+|+.++++++++. +++.++.+| ++.-
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~I-------EdPl 288 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISI-------EDGL 288 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEE-------ECCS
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceE-------eCCC
Confidence 3445556668899887 5 466666551 35788889999997 788886554 2111
Q ss_pred CCCccccHHHHHHHHhhCCCcEEEecC---CCCHHHHHHHHHhcCccEEEE
Q 023070 119 GKKFRADWNAIKAVKNALRIPVLANGN---VRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 119 ~~~~~~~~~~i~~i~~~~~ipVi~nGg---I~s~~da~~~l~~~gad~Vmi 166 (287)
.+.||+..+++++.++.||-..|+ ++++.++.+.++...||.|.+
T Consensus 289 ---~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 289 ---SENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp ---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ---CcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 146899999999988766644454 459999999999878899877
No 404
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=95.38 E-value=0.015 Score=52.33 Aligned_cols=120 Identities=14% Similarity=0.164 Sum_probs=84.6
Q ss_pred CCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCCCChhhHHHH
Q 023070 17 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 17 g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~ 95 (287)
..+|+.+.+.++.. .||..+.+..|.+ +++.-.+.++++++.+ ++.+.+..+-+|+.+++.++
T Consensus 113 ~~~~~~~~~~a~~~-~G~~~~KiKvG~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~ 176 (322)
T 1r6w_A 113 NGDPDDLILKLADM-PGEKVAKVRVGLY---------------EAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQF 176 (322)
T ss_dssp CSCHHHHHHHHHTC-CSSEEEEEECSSS---------------CHHHHHHHHHHHHHHCTTEEEEEECTTCBCHHHHHHH
T ss_pred CCCHHHHHHHHHHh-CCCceEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHH
Confidence 56888887766543 6899999886531 3566667788888776 45566666678998899999
Q ss_pred HHHHHHc---CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 96 AKMLEDA---GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 96 a~~l~~~---G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
++.+++. ++.+| ++. . .+++..+++++.+++||.+.-.+.+.+ . ..++..++|.|++
T Consensus 177 ~~~l~~~~~~~i~~i-------EqP----~-~~~~~~~~l~~~~~ipIa~dE~~~~~~-~-~~~~~~a~d~i~i 236 (322)
T 1r6w_A 177 AKYVNPDYRDRIAFL-------EEP----C-KTRDDSRAFARETGIAIAWDESLREPD-F-AFVAEEGVRAVVI 236 (322)
T ss_dssp HHTSCTTTGGGEEEE-------ECC----B-SSHHHHHHHHHHHCCCEEESGGGGSTT-C-CCCCCTTEEEEEE
T ss_pred HHHhhhhccCCeeEE-------ECC----C-CChHHHHHHHHhCCCCEEeCCCCCChh-H-hhhhcCCCCEEEE
Confidence 9988876 55544 211 1 246778888888899999988888854 4 4445456777776
No 405
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=95.37 E-value=0.32 Score=43.37 Aligned_cols=154 Identities=16% Similarity=0.229 Sum_probs=87.0
Q ss_pred CCCCEEEEecCCCH-----HHHHHHHHHHcCCCC-EEEEec-cCCh-h---hhhcCcccccccC--------ChHHHHHH
Q 023070 7 EDRPLFVQFCANDP-----EILLNAARRVEPYCD-YVDINL-GCPQ-R---IARRGNYGAFLMD--------NLPLVKSL 67 (287)
Q Consensus 7 ~~~p~~~Qi~g~~~-----~~~~~aA~~~~~g~d-~IdiN~-gcP~-~---~~~~~~~G~~l~~--------~~~~~~~i 67 (287)
...|+|+|+.-... +.+...++.+.. ++ =|-||+ .|.. . ...+.+|.|-+.+ +.+..+++
T Consensus 40 ~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~v 118 (305)
T 1rvg_A 40 QRSPVILALSEGAMKYGGRALTLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRV 118 (305)
T ss_dssp TTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHH
T ss_pred hCCCEEEECChhHHhhCCHHHHHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHH
Confidence 46799999965332 222233332222 32 255554 2322 1 2223556554432 34455555
Q ss_pred HHHHhhccCCcEEEEecC-C--CC----------hhhHHHHHHHHHHcCCCEEEEeccCCCCcCC--CCccccHHHHHHH
Q 023070 68 VEKLALNLNVPVSCKIRV-F--PN----------LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG--KKFRADWNAIKAV 132 (287)
Q Consensus 68 v~~v~~~~~~pv~vKiR~-g--~~----------~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~--~~~~~~~~~i~~i 132 (287)
++.... .++.|-.-+.. | .+ ..++.+..+.+++.|+|.+.+.=.|.-+.+. .....+++.++++
T Consensus 119 v~~ah~-~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I 197 (305)
T 1rvg_A 119 VEAAHA-VGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERI 197 (305)
T ss_dssp HHHHHH-TTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHH
T ss_pred HHHHHH-cCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHH
Confidence 555432 35555544432 1 11 1234455555567899999874333333222 2235789999999
Q ss_pred HhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 133 KNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 133 ~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
++.+++|++.-||=.=|++..+.+.+.|-+
T Consensus 198 ~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 198 ARLVPAPLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp HHHCCSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred HHhcCCCEEEeCCCCCcHHHHHHHHhhccc
Confidence 999999999999877778888787776654
No 406
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.34 E-value=0.093 Score=46.76 Aligned_cols=89 Identities=15% Similarity=0.263 Sum_probs=51.7
Q ss_pred CCCEEEEecCCCH------------HHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc
Q 023070 8 DRPLFVQFCANDP------------EILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN 74 (287)
Q Consensus 8 ~~p~~~Qi~g~~~------------~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~ 74 (287)
.+|.|.=|.--.| +...+-|+ .+++|+|.||||.-+--+ +.-.-+.....+.+..+++++++.
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrP----ga~~v~~~eE~~RvvpvI~~l~~~ 113 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRP----GFAKVSVEEEIKRVVPMIQAVSKE 113 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC--------CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4566655554333 44444444 667899999999644111 111111223344566666888877
Q ss_pred cCCcEEEEecCCCChhhHHHHHHHHHHcCCCEE
Q 023070 75 LNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLL 107 (287)
Q Consensus 75 ~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I 107 (287)
+++||+|... + .+.++...++|++.|
T Consensus 114 ~~vpiSIDT~---~----~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 114 VKLPISIDTY---K----AEVAKQAIEAGAHII 139 (297)
T ss_dssp SCSCEEEECS---C----HHHHHHHHHHTCCEE
T ss_pred CCceEEEeCC---C----HHHHHHHHHcCCCEE
Confidence 7999999842 1 234555556688777
No 407
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.31 E-value=0.069 Score=47.27 Aligned_cols=98 Identities=18% Similarity=0.178 Sum_probs=65.3
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEec-cCCCCc--CCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHH
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHG-RTRDEK--DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDV 152 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~-rt~~~~--~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da 152 (287)
..|+.+-++. .++++.+.+.|++.|.+-. ...+.. .+.....+.+.++++++.+++|++.+.++.+.+++
T Consensus 21 ~~~~i~~~~~-------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~~ 93 (297)
T 2zbt_A 21 KGGVIMDVTT-------PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEA 93 (297)
T ss_dssp TTEEEEEESS-------HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHH
T ss_pred hCCeeeeech-------HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHHH
Confidence 4466555433 6889999999999998721 000000 01011245788999999999999999888888888
Q ss_pred HHHHHhcCccEEEEehhhhhCccchhchhh
Q 023070 153 QKCLEETGCEGVLSAESLLENPALFAGFRT 182 (287)
Q Consensus 153 ~~~l~~~gad~VmiGR~~l~nP~lf~~~~~ 182 (287)
+.+++ .|||+| .+......|.+++.++.
T Consensus 94 ~~~~~-aGad~v-~~~~~~~~~~~~~~~~~ 121 (297)
T 2zbt_A 94 MILEA-IGVDFI-DESEVLTPADEEHHIDK 121 (297)
T ss_dssp HHHHH-TTCSEE-EEETTSCCSCSSCCCCG
T ss_pred HHHHH-CCCCEE-eeeCCCChHHHHHHHHH
Confidence 88887 699999 44433344566665543
No 408
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.28 E-value=0.043 Score=52.22 Aligned_cols=71 Identities=21% Similarity=0.364 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
.+..+.++.+.++|++.|.++.... . ....|+.++.+++.+ ++||++ |++.+++++..+.+ .|+|+|.+|-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G-----~-~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~-~G~d~I~v~~ 307 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG-----H-SRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIK-AGADAVKVGV 307 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC-----S-SHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHH-TTCSEEEECS
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC-----c-hHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHH-cCCCEEEEcC
Confidence 4456788889999999999974311 1 124678899999987 799887 77889999987777 6999999853
No 409
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.26 E-value=0.23 Score=51.49 Aligned_cols=102 Identities=21% Similarity=0.258 Sum_probs=72.1
Q ss_pred HHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcC--CC--C----ccccHHHHHHHHhh
Q 023070 65 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD--GK--K----FRADWNAIKAVKNA 135 (287)
Q Consensus 65 ~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~--~~--~----~~~~~~~i~~i~~~ 135 (287)
.+-+..+++.. +.|+.+-+-.+.+.++..+.+++++++|+|+|.+|........ .+ . ...-++.++.+++.
T Consensus 622 ~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~ 701 (1025)
T 1gte_A 622 CQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA 701 (1025)
T ss_dssp HHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh
Confidence 33345555544 6788888777778888999999999999999999854332211 00 0 01235678888888
Q ss_pred CCCcEE--EecCCCCHHHHHHHHHhcCccEEEE
Q 023070 136 LRIPVL--ANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 136 ~~ipVi--~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+++||+ ...++.+..++.+.+.+.|+|+|.+
T Consensus 702 ~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 702 VQIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp CSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred hCCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 899988 4567777777777776789999988
No 410
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.25 E-value=0.25 Score=43.62 Aligned_cols=132 Identities=20% Similarity=0.177 Sum_probs=86.1
Q ss_pred CCHHHHHHHH---HH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHH
Q 023070 18 NDPEILLNAA---RR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTI 93 (287)
Q Consensus 18 ~~~~~~~~aA---~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~ 93 (287)
.+.+++.... +. .+.|+|+|-+.+.-|- | .-|.+.+.++++... ..++++- |......+..
T Consensus 105 Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~d--------g---~iD~~~~~~Li~~a~---~l~vTFH-RAFD~~~d~~ 169 (287)
T 3iwp_A 105 YSDREIEVMKADIRLAKLYGADGLVFGALTED--------G---HIDKELCMSLMAICR---PLPVTFH-RAFDMVHDPM 169 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT--------S---CBCHHHHHHHHHHHT---TSCEEEC-GGGGGCSCHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCC--------C---CcCHHHHHHHHHHcC---CCcEEEE-CchhccCCHH
Confidence 4555555443 32 3569999987654343 1 136778888888653 4677765 2322223456
Q ss_pred HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHHhcCccEEE-Eehhh
Q 023070 94 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVL-SAESL 170 (287)
Q Consensus 94 ~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~~~gad~Vm-iGR~~ 170 (287)
+..+.+.+.|++.|-.+|.... ....++.++++.+.. +++|++.|||+ ++.+.++++.+|++-+= .++..
T Consensus 170 ~Ale~Li~lGvdrILTSG~~~~------a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H~S~~~~ 242 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGCDSS------ALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGATEFHCSARST 242 (287)
T ss_dssp HHHHHHHHHTCSEEEECTTSSS------TTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCCSEEEECCEEE
T ss_pred HHHHHHHHcCCCEEECCCCCCC------hHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCCCEEeECcCcc
Confidence 6677888889999977765222 134567777776643 59999999996 48888888878999884 34444
Q ss_pred h
Q 023070 171 L 171 (287)
Q Consensus 171 l 171 (287)
.
T Consensus 243 ~ 243 (287)
T 3iwp_A 243 R 243 (287)
T ss_dssp E
T ss_pred c
Confidence 3
No 411
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=95.24 E-value=0.42 Score=42.29 Aligned_cols=160 Identities=19% Similarity=0.227 Sum_probs=93.2
Q ss_pred CCCEEEEecCCC-----HHHHHHHHHH-HcC-CCCEEEEec-cCCh-h---hhhcCcccccccC--------ChHHHHHH
Q 023070 8 DRPLFVQFCAND-----PEILLNAARR-VEP-YCDYVDINL-GCPQ-R---IARRGNYGAFLMD--------NLPLVKSL 67 (287)
Q Consensus 8 ~~p~~~Qi~g~~-----~~~~~~aA~~-~~~-g~d~IdiN~-gcP~-~---~~~~~~~G~~l~~--------~~~~~~~i 67 (287)
..|+|+|+.-+. .+.+...++. ++. .+. |-||+ .|.. . ...+.+|.|-+.+ +.+..+++
T Consensus 42 ~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VP-ValHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~v 120 (286)
T 1gvf_A 42 RSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMP-LALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSV 120 (286)
T ss_dssp TCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSC-BEEEEEEECCHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCc-EEEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHH
Confidence 579999997654 2444555543 232 332 45553 2322 1 2223456554432 34455555
Q ss_pred HHHHhhccCCcEEEEecC-C--CC----------hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHh
Q 023070 68 VEKLALNLNVPVSCKIRV-F--PN----------LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN 134 (287)
Q Consensus 68 v~~v~~~~~~pv~vKiR~-g--~~----------~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~ 134 (287)
++.... .++.|-.-+.. | .+ ..++.+..+.+++.|+|.+.+.=.|.-+.+......|++.++++++
T Consensus 121 v~~ah~-~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~ 199 (286)
T 1gvf_A 121 VDFCHS-QDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIRE 199 (286)
T ss_dssp HHHHHH-TTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHH
T ss_pred HHHHHH-cCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHH
Confidence 555442 25555544432 1 10 1234455555668999999874333333222233578999999999
Q ss_pred hCCCcEEEecCCC-CHHHHHHHHHhcCccEEEEehhh
Q 023070 135 ALRIPVLANGNVR-HMEDVQKCLEETGCEGVLSAESL 170 (287)
Q Consensus 135 ~~~ipVi~nGgI~-s~~da~~~l~~~gad~VmiGR~~ 170 (287)
.+++|++.-||=. +.+++.++++ .|+--|=|++.+
T Consensus 200 ~~~vpLVlHGgSG~~~e~i~~ai~-~Gv~KiNi~Tdl 235 (286)
T 1gvf_A 200 VVDVPLVLHGASDVPDEFVRRTIE-LGVTKVNVATEL 235 (286)
T ss_dssp HCCSCEEECCCTTCCHHHHHHHHH-TTEEEEEECHHH
T ss_pred hcCCCEEEECCCCCCHHHHHHHHH-CCCeEEEEChHH
Confidence 9999999888543 3466788887 689888887765
No 412
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.23 E-value=0.083 Score=47.17 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=53.6
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHh---hccCCcEEEEecCCCChhhHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLA---LNLNVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~---~~~~~pv~vKiR~g~~~~~~~~ 94 (287)
+++...+-|+ .+++|+|.||||+|.+ .....+.+.+++..+. +..++||++... + .+
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~------------~v~~~eem~rvv~~i~~~~~~~~vpisIDT~------~-~~ 95 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDG------------LLDARTEMTTFLNLIMSEPEIARVPVMIDSS------K-WE 95 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCT------------TSCHHHHHHHHHHHHHTCHHHHTSCEEEECS------C-HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC------------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeCC------C-HH
Confidence 4455555555 6788999999997532 2233445555555554 456899999842 1 23
Q ss_pred HHHHHHH--cCCCEE-EEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEE
Q 023070 95 YAKMLED--AGCSLL-AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 142 (287)
Q Consensus 95 ~a~~l~~--~G~~~I-~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~ 142 (287)
.++...+ .|++.| .|++-.. ...++.+..+....+.|||+
T Consensus 96 V~eaaL~~~~Ga~iINdIs~~~~--------d~~~~~~~~l~a~~ga~vV~ 138 (300)
T 3k13_A 96 VIEAGLKCLQGKSIVNSISLKEG--------EEVFLEHARIIKQYGAATVV 138 (300)
T ss_dssp HHHHHHHHCSSCCEEEEECSTTC--------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhcCCCCEEEeCCcccC--------ChhHHHHHHHHHHhCCeEEE
Confidence 3444444 577765 3433211 12333344444445667664
No 413
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=95.23 E-value=0.19 Score=45.24 Aligned_cols=155 Identities=19% Similarity=0.228 Sum_probs=84.0
Q ss_pred CCCCEEEEecCCC-----HHHHHHHHH-HHcCCCC-EEEEec-cCCh----hhhhcCcccccccC--------ChHHHHH
Q 023070 7 EDRPLFVQFCAND-----PEILLNAAR-RVEPYCD-YVDINL-GCPQ----RIARRGNYGAFLMD--------NLPLVKS 66 (287)
Q Consensus 7 ~~~p~~~Qi~g~~-----~~~~~~aA~-~~~~g~d-~IdiN~-gcP~----~~~~~~~~G~~l~~--------~~~~~~~ 66 (287)
...|+|+|+.-+. .+.+..+++ .++.+++ =|-||+ .|.. ....+.+|.|-+.+ +.+..++
T Consensus 41 ~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~ 120 (323)
T 2isw_A 41 LKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKE 120 (323)
T ss_dssp TTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHH
T ss_pred hCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCCCCCHHHHHHHHHH
Confidence 4679999996532 123333333 2332222 255664 2322 12223456554432 3344555
Q ss_pred HHHHHhhccCCcEEEEecC--C-CC-------hhhHHHHHHHHHHcCCCEEEEeccCCCCcCC--CCcc--ccHHHHHHH
Q 023070 67 LVEKLALNLNVPVSCKIRV--F-PN-------LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG--KKFR--ADWNAIKAV 132 (287)
Q Consensus 67 iv~~v~~~~~~pv~vKiR~--g-~~-------~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~--~~~~--~~~~~i~~i 132 (287)
+++.... .++.|-.-+.. | .+ ..++.+..+.+++.|+|.+.+.=.|.-+.+. .... .+++.++++
T Consensus 121 vv~~ah~-~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I 199 (323)
T 2isw_A 121 VVAYAHA-RSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTI 199 (323)
T ss_dssp HHHHHHT-TTCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHH
T ss_pred HHHHHHH-cCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHH
Confidence 5555432 24444444322 1 10 1234455555568999999874333333232 1123 678999999
Q ss_pred HhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 133 KNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 133 ~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
++.+++|++.-||=.-|++..+.+.+.|-+
T Consensus 200 ~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 200 SDLTGIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp HHHHCSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred HHHhCCCeEEECCCCCCHHHHHHHHHhccc
Confidence 999999999999776677777777665543
No 414
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.21 E-value=0.16 Score=45.61 Aligned_cols=90 Identities=11% Similarity=0.110 Sum_probs=68.2
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCc
Q 023070 60 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 139 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ip 139 (287)
+++.+.+.++.+++.++.|+.|.+-.. ..+..+.++.+.+.|++.|.+|+.. + .+.++.+++ .++|
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~--~~~~~~~~~~~~~~g~d~V~l~~g~---------p--~~~~~~l~~-~g~~ 126 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV--SPWADDLVKVCIEEKVPVVTFGAGN---------P--TKYIRELKE-NGTK 126 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT--STTHHHHHHHHHHTTCSEEEEESSC---------C--HHHHHHHHH-TTCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc--CCCHHHHHHHHHHCCCCEEEECCCC---------c--HHHHHHHHH-cCCc
Confidence 688888999999887788998886442 1234566777889999999998642 1 245666765 4778
Q ss_pred EEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 140 VLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 140 Vi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
|+. .+.+.+++..+.+ .|+|+|.+
T Consensus 127 v~~--~v~s~~~a~~a~~-~GaD~i~v 150 (326)
T 3bo9_A 127 VIP--VVASDSLARMVER-AGADAVIA 150 (326)
T ss_dssp EEE--EESSHHHHHHHHH-TTCSCEEE
T ss_pred EEE--EcCCHHHHHHHHH-cCCCEEEE
Confidence 775 6889999998887 59999988
No 415
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=95.17 E-value=0.23 Score=44.34 Aligned_cols=71 Identities=17% Similarity=0.247 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCC--CCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCcc
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDG--KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~--~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad 162 (287)
+.+..+.+++.|+|.|.+.=.|.-+.+. .....|++.++++++.+++|++.-||=.-|++..+.+..+|-+
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGD 229 (307)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCc
Confidence 3444445567999999774333333222 1124789999999887799999999887788888887776543
No 416
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.17 E-value=0.22 Score=41.79 Aligned_cols=124 Identities=16% Similarity=0.150 Sum_probs=77.7
Q ss_pred ecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHH
Q 023070 15 FCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 15 i~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~ 94 (287)
+.-.+++.+.+.++. .+.|.|.|| |. .+++.+.++ .. ++|+.--++.... .+.
T Consensus 59 fvn~~~~~i~~~~~~--~~ld~vQLH-------------G~---e~~~~~~~l----~~--~~~vika~~v~~~-~~l-- 111 (203)
T 1v5x_A 59 FRDQPPEEVLRLMEE--ARLQVAQLH-------------GE---EPPEWAEAV----GR--FYPVIKAFPLEGP-ARP-- 111 (203)
T ss_dssp ESSCCHHHHHHHHHH--TTCSEEEEC-------------SC---CCHHHHHHH----TT--TSCEEEEEECSSS-CCG--
T ss_pred EeCCCHHHHHHHHHh--hCCCEEEEC-------------CC---CCHHHHHHh----cc--CCCEEEEEEcCCh-Hhh--
Confidence 334566666665543 367999999 22 355555443 21 5777766665432 111
Q ss_pred HHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 95 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 95 ~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
.+....+|++.+.... + +.....||+.++.+. ..+.|++..||+ +++.+.+++ ..++.||=+.+|.-..|
T Consensus 112 ---~~~~~~~d~~LlD~~~--g--GtG~~fdW~~l~~~~-~~~~p~~LAGGL-~peNV~~ai-~~~p~gVDvsSGvE~~p 181 (203)
T 1v5x_A 112 ---EWADYPAQALLLDGKR--P--GSGEAYPRAWAKPLL-ATGRRVILAGGI-APENLEEVL-ALRPYALDLASGVEEAP 181 (203)
T ss_dssp ---GGGGSSCSEEEEECSS--T--TSCCCCCGGGGHHHH-HTTSCEEECSSC-CSTTHHHHH-HHCCSEEEESGGGEEET
T ss_pred ---hhhhcCCCEEEEcCCC--C--CCCCccCHHHHHhhh-ccCCcEEEECCC-CHHHHHHHH-hcCCCEEEeCCceecCC
Confidence 1233448999887543 1 111157998887632 246899999999 578888888 67999999998876444
Q ss_pred c
Q 023070 175 A 175 (287)
Q Consensus 175 ~ 175 (287)
.
T Consensus 182 G 182 (203)
T 1v5x_A 182 G 182 (203)
T ss_dssp T
T ss_pred C
Confidence 3
No 417
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.13 E-value=0.48 Score=40.36 Aligned_cols=127 Identities=11% Similarity=-0.017 Sum_probs=70.0
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCC----h--h
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPN----L--Q 90 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~----~--~ 90 (287)
..|+....+++ ..+.|+|.|.+|.- ++ .+.+...++.+++. +.-|++=..+... . +
T Consensus 75 DipnTv~~~~~~~~~~gad~vtvh~~-----------~G-----~~~l~~~~~~~~~~-g~~v~vLt~~s~~~~~~~~~~ 137 (228)
T 3m47_A 75 DIPETNEKICRATFKAGADAIIVHGF-----------PG-----ADSVRACLNVAEEM-GREVFLLTEMSHPGAEMFIQG 137 (228)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEST-----------TC-----HHHHHHHHHHHHHH-TCEEEEECCCCSGGGGTTHHH
T ss_pred ccHhHHHHHHHHHHhCCCCEEEEecc-----------CC-----HHHHHHHHHHHHhc-CCCeEEEEeCCCccHHHHHHH
Confidence 45666666666 35678999999842 21 23344455544332 2334442222211 1 1
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC--CcEEEecCCCCH-HHHHHHHHhcCccEEEEe
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANGNVRHM-EDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~--ipVi~nGgI~s~-~da~~~l~~~gad~VmiG 167 (287)
....+++...+.|++++.+.+ + ..+.++.+++..+ .++ ..+||+.- .+. ++++ .|+|.+.+|
T Consensus 138 ~~~~~a~~a~~~G~~GvV~~a-t-----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~-aGad~iVvG 202 (228)
T 3m47_A 138 AADEIARMGVDLGVKNYVGPS-T-----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETL-RFADAIIVG 202 (228)
T ss_dssp HHHHHHHHHHHTTCCEEECCS-S-----------CHHHHHHHHHHHCSSSEE-EECC----------CGG-GTCSEEEEC
T ss_pred HHHHHHHHHHHhCCcEEEECC-C-----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHH-cCCCEEEEC
Confidence 234577778899999877643 1 1134566766553 444 77787632 145 6665 699999999
Q ss_pred hhhhhCccc
Q 023070 168 ESLLENPAL 176 (287)
Q Consensus 168 R~~l~nP~l 176 (287)
|+++..++.
T Consensus 203 r~I~~a~dp 211 (228)
T 3m47_A 203 RSIYLADNP 211 (228)
T ss_dssp HHHHTSSCH
T ss_pred HHHhCCCCH
Confidence 999875543
No 418
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.13 E-value=0.59 Score=39.93 Aligned_cols=130 Identities=18% Similarity=0.228 Sum_probs=74.2
Q ss_pred EEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc--cCC--c--EEEEecC
Q 023070 13 VQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNV--P--VSCKIRV 85 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~--~~~--p--v~vKiR~ 85 (287)
+-+. ..|+....+++ ..+.|+|.|.+|.- ++ .+.+...++.+++. .+. | +.|-...
T Consensus 61 ~kl~-Dip~t~~~~~~~~~~~Gad~vtvH~~-----------~g-----~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~t 123 (239)
T 1dbt_A 61 LKLH-DIPTTVNKAMKRLASLGVDLVNVHAA-----------GG-----KKMMQAALEGLEEGTPAGKKRPSLIAVTQLT 123 (239)
T ss_dssp EEEC-SCHHHHHHHHHHHHTTTCSEEEEEGG-----------GC-----HHHHHHHHHHHHHHSCTTSCCCEEEEECSCT
T ss_pred eccc-cchHHHHHHHHHHHhcCCCEEEEeCc-----------CC-----HHHHHHHHHHHHhhhccCCCCccEEEEEEcC
Confidence 5554 66777666665 45669999999942 11 22334555555443 132 3 4444433
Q ss_pred CCChhhH----------H----HHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHH
Q 023070 86 FPNLQDT----------I----KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHME 150 (287)
Q Consensus 86 g~~~~~~----------~----~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~ 150 (287)
..+.+.. . .++....+.|.+.+.... +.++.+++.. +.+++..|||+.-.
T Consensus 124 s~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~---------------~~i~~lr~~~~~~~i~v~gGI~~~~ 188 (239)
T 1dbt_A 124 STSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV---------------HEAKAIYQAVSPSFLTVTPGIRMSE 188 (239)
T ss_dssp TCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG---------------GGHHHHTTTSCTTCEEEECCBCCTT
T ss_pred CCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH---------------HHHHHHHHhcCCCcEEEeCCcCCCC
Confidence 3221111 1 222223556777654432 1245566554 36899999997532
Q ss_pred H----------HHHHHHhcCccEEEEehhhhhCcc
Q 023070 151 D----------VQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 151 d----------a~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
. ..++++ .|+|.+.+||+++..|+
T Consensus 189 ~~~~dq~rv~tp~~a~~-aGad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 189 DAANDQVRVATPAIARE-KGSSAIVVGRSITKAED 222 (239)
T ss_dssp SCCTTCSSCBCHHHHHH-TTCSEEEECHHHHTSSC
T ss_pred CCccceeccCCHHHHHH-cCCCEEEEChhhcCCCC
Confidence 2 256666 69999999999997655
No 419
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.13 E-value=0.047 Score=50.70 Aligned_cols=69 Identities=22% Similarity=0.329 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+..+.++.+.++|++.|.++... +.+ ...|+.++.+++.+ ++||++ |++.+++++..+.+ .|+|+|.+|
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-----g~~-~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~-~Gad~I~vg 222 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-----GHS-TRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLIS-VGADCLKVG 222 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-----CSS-HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHT-TTCSEEEEC
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-----CCh-HHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHh-cCCCEEEEC
Confidence 45667788889999999985221 111 23578889999988 899987 77889999998887 699999994
No 420
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=95.10 E-value=0.072 Score=45.70 Aligned_cols=127 Identities=14% Similarity=0.219 Sum_probs=79.8
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCCE--EEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCC
Q 023070 11 LFVQFCANDPEILLNAARRVEPYCDY--VDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPN 88 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~~~g~d~--IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~ 88 (287)
+.++|...|...+.++.+.++.|+|. ||+--|.=.+|. .+| ..+++++++.++.|+.+-+-.. +
T Consensus 3 i~pSila~D~~~l~~~i~~~~~gad~lHvDvmDG~fvpn~---t~G----------~~~v~~lr~~~~~~~dvhLmv~-d 68 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNL---TLS----------PFFVSQVKKLATKPLDCHLMVT-R 68 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHTTCSCEEEEEECSSSSSCC---CBC----------HHHHHHHHTTCCSCEEEEEESS-C
T ss_pred EEeehhhCChhhHHHHHHHHHcCCCEEEEEEEeCccCccc---hhc----------HHHHHHHHhccCCcEEEEEEec-C
Confidence 56889999999999999977778887 555434311121 122 3578888887788888776553 2
Q ss_pred hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCc--EEEecCCCCHH-HHHHHHHhcCccEEE
Q 023070 89 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP--VLANGNVRHME-DVQKCLEETGCEGVL 165 (287)
Q Consensus 89 ~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ip--Vi~nGgI~s~~-da~~~l~~~gad~Vm 165 (287)
. ..+++.+.++|++++++|.-... ..-...++.+++. ++- |..|-+ |+. .+..++. ++|.|.
T Consensus 69 p---~~~i~~~~~aGAd~itvh~Ea~~-------~~~~~~i~~i~~~-G~k~gv~lnp~--tp~~~~~~~l~--~~D~Vl 133 (231)
T 3ctl_A 69 P---QDYIAQLARAGADFITLHPETIN-------GQAFRLIDEIRRH-DMKVGLILNPE--TPVEAMKYYIH--KADKIT 133 (231)
T ss_dssp G---GGTHHHHHHHTCSEEEECGGGCT-------TTHHHHHHHHHHT-TCEEEEEECTT--CCGGGGTTTGG--GCSEEE
T ss_pred H---HHHHHHHHHcCCCEEEECcccCC-------ccHHHHHHHHHHc-CCeEEEEEECC--CcHHHHHHHHh--cCCEEE
Confidence 3 34567888999999999964311 1112556666654 332 333333 443 4444444 699887
Q ss_pred E
Q 023070 166 S 166 (287)
Q Consensus 166 i 166 (287)
+
T Consensus 134 v 134 (231)
T 3ctl_A 134 V 134 (231)
T ss_dssp E
T ss_pred E
Confidence 6
No 421
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=95.10 E-value=0.059 Score=48.45 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=51.6
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccc---cccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGA---FLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~---~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~ 94 (287)
+++...+-|+ ++++|+|.||||.-+-.+ |+ +.....+.+..+|+++++..++||+|...- .+
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~-------~~ 96 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRP-------GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWK-------SQ 96 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSC-------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCC-------HH
Confidence 3444444444 678899999999633111 22 112456677888888888789999998321 35
Q ss_pred HHHHHHHcCCCEE-EEecc
Q 023070 95 YAKMLEDAGCSLL-AVHGR 112 (287)
Q Consensus 95 ~a~~l~~~G~~~I-~vh~r 112 (287)
.++...++|++.| .|++.
T Consensus 97 Va~aAl~aGa~iINDVsg~ 115 (314)
T 2vef_A 97 VAEAALAAGADLVNDITGL 115 (314)
T ss_dssp HHHHHHHTTCCEEEETTTT
T ss_pred HHHHHHHcCCCEEEECCCC
Confidence 6777778899888 45543
No 422
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.07 E-value=0.62 Score=40.01 Aligned_cols=130 Identities=13% Similarity=0.192 Sum_probs=72.8
Q ss_pred EEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhc--cC--Cc--EEEEecC
Q 023070 13 VQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LN--VP--VSCKIRV 85 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~--~~--~p--v~vKiR~ 85 (287)
+-+. ..|+....+++ ..+.|+|.|.+|.- ++ .+.+.+.++.+++. .+ .| +.+....
T Consensus 62 ~kl~-Dip~t~~~~~~~~~~~Gad~vTvH~~-----------~g-----~~~l~~~~~~~~~~~~~G~~~~~~lav~~~T 124 (246)
T 2yyu_A 62 LKLH-DIPNTVKQAMKGLARVGADLVNVHAA-----------GG-----RRMMEAAIEGLDAGTPSGRMRPRCIAVTQLT 124 (246)
T ss_dssp EEEC-SCHHHHHHHHHHHHHTTCSEEEEEGG-----------GC-----HHHHHHHHHHHHHHSCSSSCCCEEEEESSCT
T ss_pred eecc-cchHHHHHHHHHHHhcCCCEEEEECC-----------CC-----HHHHHHHHHHHHhhcccCCcCCCEEEEEeCC
Confidence 5554 66777666665 35679999999942 11 23345555666541 22 33 3333222
Q ss_pred CCChhhH--------------HHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCH-
Q 023070 86 FPNLQDT--------------IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHM- 149 (287)
Q Consensus 86 g~~~~~~--------------~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~- 149 (287)
..+.++. ..++....+.|.+.+.... ++ ++++++.. ..+++..|||+.-
T Consensus 125 s~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------~e-i~~lr~~~~~~~i~V~gGI~~~g 189 (246)
T 2yyu_A 125 STDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA--------------NE-AAFIKERCGASFLAVTPGIRFAD 189 (246)
T ss_dssp TCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH--------------HH-HHHHHHHHCTTSEEEECCCCCCC
T ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH--------------HH-HHHHHHhcCCCCEEEeCCcCCCC
Confidence 2111111 1222223456777653321 23 55666554 3568999999742
Q ss_pred H---------HHHHHHHhcCccEEEEehhhhhCcc
Q 023070 150 E---------DVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 150 ~---------da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
. .+.++++ .|+|.+.+||+++..++
T Consensus 190 ~~~~dq~rv~t~~~a~~-aGad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 190 DAAHDQVRVVTPRKARA-LGSDYIVIGRSLTRAAD 223 (246)
T ss_dssp -------CCCCHHHHHH-HTCSEEEECHHHHTSSS
T ss_pred CCcccccccCCHHHHHH-cCCCEEEECHhhcCCCC
Confidence 0 3566666 59999999999997655
No 423
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.06 E-value=0.13 Score=44.96 Aligned_cols=105 Identities=25% Similarity=0.292 Sum_probs=67.6
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC------------
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV------------ 85 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~------------ 85 (287)
+|++..+.|. +++.|+++|.|--| ....+.|+++.++ ++||.--+.+
T Consensus 92 ~~~~a~~~a~rl~kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~ 151 (264)
T 1m3u_A 92 TPEQAFENAATVMRAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYK 151 (264)
T ss_dssp SHHHHHHHHHHHHHTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeE
Confidence 5666655444 55667777777521 2344555555443 7888733322
Q ss_pred --CCCh---hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcC
Q 023070 86 --FPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETG 160 (287)
Q Consensus 86 --g~~~---~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~g 160 (287)
|-+. +++++-++.++++|++.|.+.+.. . +..+++.+.+++|+|+-|.= .+
T Consensus 152 v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~vp----------~--~~a~~it~~l~iP~igIGag------------~~ 207 (264)
T 1m3u_A 152 VQGRGDEAGDQLLSDALALEAAGAQLLVLECVP----------V--ELAKRITEALAIPVIGIGAG------------NV 207 (264)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTCCEEEEESCC----------H--HHHHHHHHHCSSCEEEESSC------------TT
T ss_pred EEeCCHHHHHHHHHHHHHHHHCCCcEEEEecCC----------H--HHHHHHHHhCCCCEEEeCCC------------CC
Confidence 2222 456777888999999999997541 1 56788999999999987632 36
Q ss_pred ccEEEEe
Q 023070 161 CEGVLSA 167 (287)
Q Consensus 161 ad~VmiG 167 (287)
|||-++-
T Consensus 208 ~dgQvLV 214 (264)
T 1m3u_A 208 TDGQILV 214 (264)
T ss_dssp SSEEEEC
T ss_pred CCcceee
Confidence 8886543
No 424
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.05 E-value=0.46 Score=42.11 Aligned_cols=160 Identities=15% Similarity=0.130 Sum_probs=92.0
Q ss_pred EecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC-Chhh
Q 023070 14 QFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQD 91 (287)
Q Consensus 14 Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-~~~~ 91 (287)
=+...|+-. |++++ .|||+|=+-= .....+ -|+-....-..+.+...+++|.+.++.||++.+-.|+ +..+
T Consensus 19 ~~~a~D~~s----A~~~~~aG~~ai~vs~-~~~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~ 91 (290)
T 2hjp_A 19 AMAAHNPLV----AKLAEQAGFGGIWGSG-FELSAS--YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVN 91 (290)
T ss_dssp EEECSSHHH----HHHHHHHTCSEEEECH-HHHHHH--TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHH
T ss_pred EecCCCHHH----HHHHHHcCCCEEEECh-HHHHHh--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHH
Confidence 344556543 44443 5899887651 011112 2233333456777888888998899999999998875 4567
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCC------CCcccc---HHHHHHHHhhC---CCcEEEecCCC----CHHHHH--
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDG------KKFRAD---WNAIKAVKNAL---RIPVLANGNVR----HMEDVQ-- 153 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~------~~~~~~---~~~i~~i~~~~---~ipVi~nGgI~----s~~da~-- 153 (287)
+.+.++.+.++|+.+|.+-+.....+.+ ....+. .+.|+.+++.- +.-|++=.+-. ..+++.
T Consensus 92 ~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~R 171 (290)
T 2hjp_A 92 VHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRR 171 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHH
Confidence 7888999999999999997664321111 101111 23344444442 33344433332 134443
Q ss_pred -HHHHhcCccEEEEehhhhhCccchhchh
Q 023070 154 -KCLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 154 -~~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+.+.+.|||+|++=-+ +.++..++++.
T Consensus 172 a~ay~eAGAd~i~~e~~-~~~~~~~~~i~ 199 (290)
T 2hjp_A 172 GQAYEEAGADAILIHSR-QKTPDEILAFV 199 (290)
T ss_dssp HHHHHHTTCSEEEECCC-CSSSHHHHHHH
T ss_pred HHHHHHcCCcEEEeCCC-CCCHHHHHHHH
Confidence 2333469999988311 34556666554
No 425
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=95.03 E-value=0.19 Score=46.54 Aligned_cols=90 Identities=17% Similarity=0.295 Sum_probs=60.2
Q ss_pred CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCC------------------------------Cc----CCC-
Q 023070 76 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD------------------------------EK----DGK- 120 (287)
Q Consensus 76 ~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~------------------------------~~----~~~- 120 (287)
+.|+.+-+-...+.+...+++++++++|++.|.++--+.. +. ...
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 4566666544345566778888889999998877421100 00 000
Q ss_pred ----------CccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 121 ----------KFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 121 ----------~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.....|+.++.+++.+++||++- |+.+++++..+.+ .|+|+|.++
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~-aGad~I~vs 280 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAK-GILRGDDAREAVK-HGLNGILVS 280 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEE-EECCHHHHHHHHH-TTCCEEEEC
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEE-ecCCHHHHHHHHH-cCCCEEEeC
Confidence 11246889999999999999986 4689999998887 699999983
No 426
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.02 E-value=0.14 Score=45.31 Aligned_cols=81 Identities=17% Similarity=0.141 Sum_probs=48.5
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 97 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~ 97 (287)
+++...+.|+ .+++|+|.||||.-+..+ +.-.-......+.+..+++++++. ++||++...- .+.++
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestrp----ga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~~-------~~va~ 94 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSRP----GATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMR-------ADVAR 94 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC------------------HHHHHHHHHHHHHT-TCCEEEECSC-------HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCC----CCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCCC-------HHHHH
Confidence 5677766665 678899999999533111 111112234566777788888765 8999998321 34566
Q ss_pred HHHHcCCCEE-EEec
Q 023070 98 MLEDAGCSLL-AVHG 111 (287)
Q Consensus 98 ~l~~~G~~~I-~vh~ 111 (287)
...++|++.| .|++
T Consensus 95 aAl~aGa~iINdvsg 109 (280)
T 1eye_A 95 AALQNGAQMVNDVSG 109 (280)
T ss_dssp HHHHTTCCEEEETTT
T ss_pred HHHHcCCCEEEECCC
Confidence 7777898877 4443
No 427
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=95.02 E-value=0.35 Score=44.44 Aligned_cols=43 Identities=21% Similarity=0.573 Sum_probs=38.0
Q ss_pred cccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 123 RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 123 ~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
..+|+.++.+++.+++||++- |+.+++++..+.+ .|+|+|.++
T Consensus 211 ~~~~~~i~~i~~~~~~Pv~vk-gv~t~e~a~~a~~-aGad~I~vs 253 (380)
T 1p4c_A 211 SFNWEALRWLRDLWPHKLLVK-GLLSAEDADRCIA-EGADGVILS 253 (380)
T ss_dssp TCCHHHHHHHHHHCCSEEEEE-EECCHHHHHHHHH-TTCSEEEEC
T ss_pred cccHHHHHHHHHhcCCCEEEE-ecCcHHHHHHHHH-cCCCEEEEc
Confidence 457999999999999999986 4899999999988 699999994
No 428
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=95.02 E-value=0.03 Score=50.57 Aligned_cols=122 Identities=8% Similarity=-0.011 Sum_probs=89.4
Q ss_pred CCEEEEec-C--CCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC
Q 023070 9 RPLFVQFC-A--NDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 85 (287)
Q Consensus 9 ~p~~~Qi~-g--~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~ 85 (287)
.|+-..+. . .+|+.+. +.++.||..+.+..| . +++.-.+.++++++ -++.+.+..+-
T Consensus 99 v~~~~~~~~~~~~~~~~~~---~~~~~G~~~~KiKvg------------~----~~~~d~~~v~avr~-~~~~l~vDaN~ 158 (330)
T 3caw_A 99 IKNNYLLSHFQDLKPGFLD---GLKNEGYNTVKVKMG------------R----DLQKEADMLTHIAA-SGMRMRLDFNA 158 (330)
T ss_dssp CCBCEEECTTSCCCTTHHH---HHHHHTCCEEEEECS------------S----CHHHHHHHHHHHHH-TTCEEEEECTT
T ss_pred eEEEEEecCCCCCCHHHHH---HHHHcCCcEEEEecC------------C----CHHHHHHHHHHHhC-CCCeEEEECCC
Confidence 45556665 3 5788777 555669999999764 1 45666778888888 67888888888
Q ss_pred CCChhhHHHHHHHHHH---cCCCEEEEeccCCCCcCCCCccc-cHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCc
Q 023070 86 FPNLQDTIKYAKMLED---AGCSLLAVHGRTRDEKDGKKFRA-DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 161 (287)
Q Consensus 86 g~~~~~~~~~a~~l~~---~G~~~I~vh~rt~~~~~~~~~~~-~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~ga 161 (287)
+|+.+++.++++.+++ .++.+| ++.-. +. |++.. ++ .+ +||.+.-. +..++.++++...+
T Consensus 159 ~~~~~~A~~~~~~l~~~~~~~l~~i-------EqP~~---~~~d~~~~--l~-~~-iPIa~dEs--~~~~~~~~i~~~a~ 222 (330)
T 3caw_A 159 LGSWQTFEKFMVNLPLTVRPLIEYV-------EDPFP---FDFHAWGE--AR-KL-AKIALDNQ--YDKVPWGKIASAPF 222 (330)
T ss_dssp CSCHHHHHHHHHTSCTTTGGGEEEE-------ECCSS---CCHHHHHH--HT-TT-SCEEESTT--GGGCCTTTCSSCSC
T ss_pred CCCHHHHHHHHHHhhhhccCCceEE-------ECCCC---CCccHHHH--HH-hc-CcEEeCCC--CHHHHHHHHHcCCC
Confidence 9999999999999988 666555 22111 23 55555 77 77 99888666 88899888887788
Q ss_pred cEEEE
Q 023070 162 EGVLS 166 (287)
Q Consensus 162 d~Vmi 166 (287)
|.|.+
T Consensus 223 d~v~~ 227 (330)
T 3caw_A 223 DVIVI 227 (330)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 98887
No 429
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=94.96 E-value=0.27 Score=44.69 Aligned_cols=116 Identities=16% Similarity=0.239 Sum_probs=81.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCC-CCHHHHHHHHHhcCccEEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNV-RHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI-~s~~da~~~l~~~gad~Vmi 166 (287)
+.+.+++-++.++++|++.|-+.--+ ..+.+.++.+++.+++|+++ || +++.-+.++++ .|+|.+=|
T Consensus 44 D~~atv~Qi~~l~~aG~diVRvavp~---------~~~a~al~~I~~~~~vPlva--DiHf~~~lal~a~e-~G~dklRI 111 (366)
T 3noy_A 44 DVEATLNQIKRLYEAGCEIVRVAVPH---------KEDVEALEEIVKKSPMPVIA--DIHFAPSYAFLSME-KGVHGIRI 111 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS---------HHHHHHHHHHHHHCSSCEEE--ECCSCHHHHHHHHH-TTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCC---------hHHHHHHHHHHhcCCCCEEE--eCCCCHHHHHHHHH-hCCCeEEE
Confidence 45567788889999999999886221 23357789999999999986 66 78999999998 59999999
Q ss_pred ehhhhhCccchhchhh--hhhcc-------CCc-------cccCCCchhHHHHHHHHHHHHHhCC
Q 023070 167 AESLLENPALFAGFRT--AEWIV-------GSE-------EISKDGNLDQADLLVEYLKLCEKYP 215 (287)
Q Consensus 167 GR~~l~nP~lf~~~~~--~~~~~-------~g~-------~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (287)
-=|-+.+++-|.++-. .++.. .|. .+..+++....+-+.+|.+++++.+
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 9999988876665521 11100 010 0111344455677888888888765
No 430
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=94.94 E-value=0.065 Score=47.73 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=56.3
Q ss_pred HHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh--CCCcEEE
Q 023070 66 SLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLA 142 (287)
Q Consensus 66 ~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~--~~ipVi~ 142 (287)
+.++++++.. ..++.|-+. +.+ -++.+.++|+|.|-+... +.+.++++.+. .++++.+
T Consensus 198 ~Av~~~r~~~p~~~ieVEvd---tld----e~~eAl~aGaD~I~LDn~------------~~~~l~~av~~i~~~v~iea 258 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQIEVE---TLD----QLRTALAHGARSVLLDNF------------TLDMMRDAVRVTEGRAVLEV 258 (298)
T ss_dssp HHHHHHHHHC--CCCEEEES---SHH----HHHHHHHTTCEEEEEESC------------CHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEeC---CHH----HHHHHHHcCCCEEEECCC------------CHHHHHHHHHHhCCCCeEEE
Confidence 4455555443 344444432 222 245556689999988742 22444444443 3688999
Q ss_pred ecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 143 NGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 143 nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
+||| +++.+.++.+ +|+|++.+|.....-|+
T Consensus 259 SGGI-~~~~i~~~a~-tGVD~isvG~lt~sa~~ 289 (298)
T 3gnn_A 259 SGGV-NFDTVRAIAE-TGVDRISIGALTKDVRA 289 (298)
T ss_dssp ESSC-STTTHHHHHH-TTCSEEECGGGGTSCCC
T ss_pred EcCC-CHHHHHHHHH-cCCCEEEECCeecCCCc
Confidence 9999 5688888777 79999999986655554
No 431
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=94.93 E-value=0.87 Score=40.07 Aligned_cols=111 Identities=17% Similarity=0.170 Sum_probs=68.2
Q ss_pred EEecCCCHHHHHHHHHHHc-CCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCc-EEEEecCCC---
Q 023070 13 VQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVP-VSCKIRVFP--- 87 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~-~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~p-v~vKiR~g~--- 87 (287)
+-+...|.-. |++++ .|+|.| + .|....++.- |+-..+.-..+.+...+++|++.++.| |.+.+..|.
T Consensus 37 ~~~tayDa~s----A~l~e~aG~d~i-l-vGdSl~~~~l-G~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~ 109 (281)
T 1oy0_A 37 AMLTAYDYST----ARIFDEAGIPVL-L-VGDSAANVVY-GYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEA 109 (281)
T ss_dssp EEEECCSHHH----HHHHHTTTCCEE-E-ECTTHHHHTT-CCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTT
T ss_pred EEEeCcCHHH----HHHHHHcCCCEE-E-ECHHHHHHHc-CCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccC
Confidence 4455555432 55554 599998 4 3655554433 344445556677777778888777644 556655542
Q ss_pred ChhhHHHHHHH-HHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE
Q 023070 88 NLQDTIKYAKM-LEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL 141 (287)
Q Consensus 88 ~~~~~~~~a~~-l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi 141 (287)
+.+++.+-+.+ ++++|+++|.+-+.. .-.+.|+.+.+. ++||+
T Consensus 110 s~~~a~~na~rl~~eaGa~aVklEdg~----------e~~~~I~al~~a-gIpV~ 153 (281)
T 1oy0_A 110 GPTAALAAATRFLKDGGAHAVKLEGGE----------RVAEQIACLTAA-GIPVM 153 (281)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEBSG----------GGHHHHHHHHHH-TCCEE
T ss_pred CHHHHHHHHHHHHHHhCCeEEEECCcH----------HHHHHHHHHHHC-CCCEE
Confidence 45566654444 455999999997651 223567777664 78887
No 432
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.91 E-value=1.7 Score=37.64 Aligned_cols=140 Identities=13% Similarity=0.154 Sum_probs=90.2
Q ss_pred CCC-EEEEecCCCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 023070 8 DRP-LFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIR 84 (287)
Q Consensus 8 ~~p-~~~Qi~g~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR 84 (287)
..| +++-|.+.+.+++...++ ..+.|+|.||+=.-+ +.. ..+.+.+.+.+..+++.. ++|+.+=+|
T Consensus 18 ~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~---------l~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~R 86 (257)
T 2yr1_A 18 TEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADF---------FRA--IDDQERVLATANGLRNIAGEIPILFTIR 86 (257)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGG---------CTT--TTCHHHHHHHHHHHHHHSSSCCEEEECC
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeec---------ccc--cCcHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 345 779999999999866666 467799999996421 110 124577888889998887 799999988
Q ss_pred CCC--------ChhhHHHHHHHHHHcC-CCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecC----CCCHHH
Q 023070 85 VFP--------NLQDTIKYAKMLEDAG-CSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN----VRHMED 151 (287)
Q Consensus 85 ~g~--------~~~~~~~~a~~l~~~G-~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGg----I~s~~d 151 (287)
.-+ +.++..++.+.+.+.| +++|.|--... . ....+.+.....++.||++=- --+.++
T Consensus 87 t~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~--------~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~e 157 (257)
T 2yr1_A 87 SEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYG--------E-RIADVRRMTEECSVWLVVSRHYFDGTPRKET 157 (257)
T ss_dssp CTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGT--------T-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHH
T ss_pred ecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCC--------h-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 621 2345677888888888 99999963211 1 112222222234667777642 233455
Q ss_pred HHHHHH---hcCccEEEEe
Q 023070 152 VQKCLE---ETGCEGVLSA 167 (287)
Q Consensus 152 a~~~l~---~~gad~VmiG 167 (287)
+.+.++ ..|||.|=++
T Consensus 158 l~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 158 LLADMRQAERYGADIAKVA 176 (257)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEE
Confidence 554443 3688877554
No 433
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.81 E-value=0.25 Score=42.97 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=51.5
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc---------------cccHHHHHHHHhhC-CCcEEEecCCCC--
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF---------------RADWNAIKAVKNAL-RIPVLANGNVRH-- 148 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~---------------~~~~~~i~~i~~~~-~ipVi~nGgI~s-- 148 (287)
++.+.+.++++.+.++|+|.|.+-.-..++...++. ..-++.++++++.+ ++|+++.|..+.
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~ 107 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIF 107 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHH
Confidence 566789999999999999999984322221111100 01135688888888 899999654321
Q ss_pred ---HHHHHHHHHhcCccEEEEe
Q 023070 149 ---MEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 149 ---~~da~~~l~~~gad~VmiG 167 (287)
.+...+.....|+||+.+.
T Consensus 108 ~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEEECT
T ss_pred HhhHHHHHHHHHHcCCCEEEEC
Confidence 1333333444799999984
No 434
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.76 E-value=0.4 Score=43.71 Aligned_cols=96 Identities=11% Similarity=0.090 Sum_probs=67.5
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEecCCCC---------------------------------hhhHHHHHHHHHHcCCC
Q 023070 59 DNLPLVKSLVEKLALNLNVPVSCKIRVFPN---------------------------------LQDTIKYAKMLEDAGCS 105 (287)
Q Consensus 59 ~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~---------------------------------~~~~~~~a~~l~~~G~~ 105 (287)
..++.+.+.++.+++.++.|+.|.+-.... .....+.++.+.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 357778888888877666677766422111 01134567778899999
Q ss_pred EEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEE-eh
Q 023070 106 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS-AE 168 (287)
Q Consensus 106 ~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi-GR 168 (287)
.|.+|... ..++.++.+++ .++||+. .+.|++++..+.+ .|+|+|.+ |+
T Consensus 125 ~V~~~~g~----------~~~~~i~~~~~-~g~~v~~--~v~t~~~a~~a~~-~GaD~i~v~g~ 174 (369)
T 3bw2_A 125 VVSFHFGV----------PDREVIARLRR-AGTLTLV--TATTPEEARAVEA-AGADAVIAQGV 174 (369)
T ss_dssp EEEEESSC----------CCHHHHHHHHH-TTCEEEE--EESSHHHHHHHHH-TTCSEEEEECT
T ss_pred EEEEeCCC----------CcHHHHHHHHH-CCCeEEE--ECCCHHHHHHHHH-cCCCEEEEeCC
Confidence 99998542 23577888876 4777776 4789999987777 69999998 64
No 435
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=94.76 E-value=0.12 Score=44.18 Aligned_cols=42 Identities=29% Similarity=0.372 Sum_probs=35.7
Q ss_pred CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchhc
Q 023070 137 RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAG 179 (287)
Q Consensus 137 ~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~~ 179 (287)
+++|++.|||++.+++..+.. .|+||+.||.+++.-+++..-
T Consensus 176 ~~~ilyggsV~~~n~~~~~~~-~~vDG~LVG~a~l~a~~~~~~ 217 (225)
T 1hg3_A 176 EVKVLCGAGISTGEDVKKAIE-LGTVGVLLASGVTKAKDPEKA 217 (225)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-TTCSEEEESHHHHTCSSHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHh-CCCCEEEeCHHHHCCcCHHHH
Confidence 589999999999999887776 699999999999977765543
No 436
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=94.75 E-value=0.41 Score=40.71 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=65.1
Q ss_pred cEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHH
Q 023070 78 PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE 157 (287)
Q Consensus 78 pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~ 157 (287)
|+..=+|. .+.++..++++.+.+.|++.|.+.-++. ...+.++++++..+--+++.|-+.+.+++..+++
T Consensus 18 ~ii~vir~-~~~~~~~~~~~al~~gGv~~iel~~k~~---------~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~ 87 (224)
T 1vhc_A 18 KIVPVIAL-DNADDILPLADTLAKNGLSVAEITFRSE---------AAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKS 87 (224)
T ss_dssp CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHH
T ss_pred CeEEEEeC-CCHHHHHHHHHHHHHcCCCEEEEeccCc---------hHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHH
Confidence 44444444 5668899999999999999999974432 2356788888876434566677889999999998
Q ss_pred hcCccEEEEehhhhhCccchhch
Q 023070 158 ETGCEGVLSAESLLENPALFAGF 180 (287)
Q Consensus 158 ~~gad~VmiGR~~l~nP~lf~~~ 180 (287)
.|||+|..+. .|+.+....
T Consensus 88 -aGAd~v~~p~---~d~~v~~~a 106 (224)
T 1vhc_A 88 -SGADFVVTPG---LNPKIVKLC 106 (224)
T ss_dssp -HTCSEEECSS---CCHHHHHHH
T ss_pred -CCCCEEEECC---CCHHHHHHH
Confidence 5999998873 566655443
No 437
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=94.69 E-value=0.31 Score=42.52 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=53.1
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCc-------------cc--cHHHHHHHHhh-CCCcEEEecCCC---
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-------------RA--DWNAIKAVKNA-LRIPVLANGNVR--- 147 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~-------------~~--~~~~i~~i~~~-~~ipVi~nGgI~--- 147 (287)
++.+++.++++.++++|+|+|.+---..++...++. .. -++.++++++. +++||++-+...
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~ 107 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVF 107 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHH
Confidence 456788999999999999999994322221111100 00 13668889988 899998754221
Q ss_pred --C-HHHHHHHHHhcCccEEEEehhhh
Q 023070 148 --H-MEDVQKCLEETGCEGVLSAESLL 171 (287)
Q Consensus 148 --s-~~da~~~l~~~gad~VmiGR~~l 171 (287)
. ...+..+.+ .|+|++.+.-..+
T Consensus 108 ~~g~~~~~~~~~~-aGadgii~~d~~~ 133 (268)
T 1qop_A 108 NNGIDAFYARCEQ-VGVDSVLVADVPV 133 (268)
T ss_dssp TTCHHHHHHHHHH-HTCCEEEETTCCG
T ss_pred HhhHHHHHHHHHH-cCCCEEEEcCCCH
Confidence 1 234444444 7999999864443
No 438
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=94.66 E-value=0.73 Score=39.57 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=33.3
Q ss_pred HHHHHhhC-CCcEEEecCCCCHH----------HHHHHHHhcCccEEEEehhhhhCcc
Q 023070 129 IKAVKNAL-RIPVLANGNVRHME----------DVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 129 i~~i~~~~-~ipVi~nGgI~s~~----------da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++++++.. +.+++..|||+.-. ...++++ .|+|.+.+||+++..++
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~-aGad~iVvGr~I~~a~d 229 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALS-AGVDYMVIGRPVTQSVD 229 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHH-TTCSEEEECHHHHTSSS
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHH-cCCCEEEECHHHcCCCC
Confidence 44555543 46899999997421 4666666 69999999999997655
No 439
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=94.64 E-value=1.5 Score=37.51 Aligned_cols=136 Identities=11% Similarity=0.086 Sum_probs=82.4
Q ss_pred EEEEecC-CCHHHHHHHHHH-HcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEecCC-
Q 023070 11 LFVQFCA-NDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF- 86 (287)
Q Consensus 11 ~~~Qi~g-~~~~~~~~aA~~-~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKiR~g- 86 (287)
+++-|.| .+.+++.+.++. .+.|+|.||+=.- .+.. .+++.+.+.+..+++.. ++|+.+=+|.-
T Consensus 6 Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD---------~l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~ 73 (238)
T 1sfl_A 6 VVATITPQLSIEETLIQKINHRIDAIDVLELRID---------QFEN---VTVDQVAEMITKLKVMQDSFKLLVTYRTKL 73 (238)
T ss_dssp EEEEECCCC---CHHHHHHHHTTTTCSEEEEECT---------TSTT---CCHHHHHHHHHHHC---CCSEEEEECCBGG
T ss_pred EEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEec---------cccc---CCHHHHHHHHHHHHHhccCCCEEEEeeccc
Confidence 6789999 999988776664 4568999999643 2211 14677888888998877 78999988862
Q ss_pred ------CChhhHHHHHHHHHHc-CCCEEEEeccCCCCcCCCCccccHHHHHHH---HhhCCCcEEEecC----CCCHHHH
Q 023070 87 ------PNLQDTIKYAKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAV---KNALRIPVLANGN----VRHMEDV 152 (287)
Q Consensus 87 ------~~~~~~~~~a~~l~~~-G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i---~~~~~ipVi~nGg----I~s~~da 152 (287)
.+.++..++.+.+.+. ++++|.|--.... +-+.++++ ....++.||++=- --+.+++
T Consensus 74 eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el 144 (238)
T 1sfl_A 74 QGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADI---------DIEKHQRIITHLQQYNKEVIISHHNFESTPPLDEL 144 (238)
T ss_dssp GTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTTS---------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCCC---------ChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHH
Confidence 1344567778877777 6999999632200 11222332 2233566777642 2334666
Q ss_pred HHHHH---hcCccEEEEe
Q 023070 153 QKCLE---ETGCEGVLSA 167 (287)
Q Consensus 153 ~~~l~---~~gad~VmiG 167 (287)
...++ ..|||.|=++
T Consensus 145 ~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 145 QFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp HHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 55543 3688877554
No 440
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=94.54 E-value=0.33 Score=43.45 Aligned_cols=94 Identities=16% Similarity=0.098 Sum_probs=60.7
Q ss_pred HHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEE-EecCCCChhhHHHHHHHHHHcCCC-
Q 023070 28 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC-KIRVFPNLQDTIKYAKMLEDAGCS- 105 (287)
Q Consensus 28 ~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~v-KiR~g~~~~~~~~~a~~l~~~G~~- 105 (287)
+.++.|+|.||||+.+--+ + +....++...++++.+++.+++|+++ .. | +.+.-.+.++...++|++
T Consensus 82 ~~v~~GAdiIDIg~~StrP----~----~~~vs~eee~~vV~~v~~~~~vplsI~DT--~-~~~~~~~V~eaal~aga~~ 150 (310)
T 2h9a_B 82 KCVEYGADIVALRLVSAHP----D----GQNRSGAELAEVCKAVADAIDVPLMIIGC--G-VEEKDAEIFPVIGEALSGR 150 (310)
T ss_dssp HHHHTTCSEEEEECGGGCT----T----TTCCCHHHHHHHHHHHHHHCSSCEEEECC--S-CHHHHHHHHHHHHHHTTTS
T ss_pred HHHHcCCcEEEEeCccCCC----C----CCCCCHHHHHHHHHHHHHhCCceEEEECC--C-CCCCCHHHHHHHHHhCCCC
Confidence 4667899999999753111 1 12245666777899998888999998 52 1 122334677888888887
Q ss_pred --EE-EEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEec
Q 023070 106 --LL-AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANG 144 (287)
Q Consensus 106 --~I-~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nG 144 (287)
.| .+++- +++.+..+....+.||++..
T Consensus 151 k~iINdvs~~------------~~~~~~~~aa~~g~~vv~m~ 180 (310)
T 2h9a_B 151 NCLLSSATKD------------NYKPIVATCMVHGHSVVASA 180 (310)
T ss_dssp CCEEEEECTT------------THHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEECCCC------------ccHHHHHHHHHhCCCEEEEC
Confidence 44 33321 34455555566688988765
No 441
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=94.50 E-value=0.22 Score=42.12 Aligned_cols=88 Identities=25% Similarity=0.331 Sum_probs=65.9
Q ss_pred CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHH
Q 023070 77 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 156 (287)
Q Consensus 77 ~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l 156 (287)
.|+..=+|. .+.++..++++.+.+.|++.|.+.-++. ...+.++++++..+-.+++.|-+.+.+++..++
T Consensus 16 ~~~i~v~r~-~~~~~~~~~~~al~~gGv~~iel~~k~~---------~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~ 85 (214)
T 1wbh_A 16 GPVVPVIVV-KKLEHAVPMAKALVAGGVRVLNVTLRTE---------CAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVT 85 (214)
T ss_dssp CSEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEESCST---------THHHHHHHHHHHCTTSEEEEESCCSHHHHHHHH
T ss_pred CCEEEEEEC-CCHHHHHHHHHHHHHcCCCEEEEeCCCh---------hHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHH
Confidence 345544554 4567889999999999999999974432 235678888887754567778899999999999
Q ss_pred HhcCccEEEEehhhhhCccchh
Q 023070 157 EETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 157 ~~~gad~VmiGR~~l~nP~lf~ 178 (287)
+ .|||+|..|- .++.+..
T Consensus 86 ~-aGAd~v~~p~---~d~~v~~ 103 (214)
T 1wbh_A 86 E-AGAQFAISPG---LTEPLLK 103 (214)
T ss_dssp H-HTCSCEEESS---CCHHHHH
T ss_pred H-cCCCEEEcCC---CCHHHHH
Confidence 8 5999999883 4665544
No 442
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=94.50 E-value=0.18 Score=47.39 Aligned_cols=70 Identities=16% Similarity=0.322 Sum_probs=55.3
Q ss_pred CChhhHHHHHHHHHH-cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecC-CCCHHHHHHHHHhcCcc
Q 023070 87 PNLQDTIKYAKMLED-AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGN-VRHMEDVQKCLEETGCE 162 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~-~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGg-I~s~~da~~~l~~~gad 162 (287)
|+.++++++++.+.+ .++.+| ++.- .+.||+..+++++.+ ++||.+.-- +.++.++.++++...+|
T Consensus 279 ~t~~eai~~~~~l~~~~~i~~i-------EePl---~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d 348 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYPIITI-------EDGM---DENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAAN 348 (444)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE-------ESCS---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCS
T ss_pred CCHHHHHHHHHHHHHhCCcEEE-------ECCC---ChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCC
Confidence 677888999988865 775544 2211 146899999999988 899988776 99999999999987899
Q ss_pred EEEE
Q 023070 163 GVLS 166 (287)
Q Consensus 163 ~Vmi 166 (287)
.|++
T Consensus 349 ~i~i 352 (444)
T 1w6t_A 349 SILI 352 (444)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 443
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=94.48 E-value=0.37 Score=41.80 Aligned_cols=132 Identities=18% Similarity=0.188 Sum_probs=84.5
Q ss_pred EEecCCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C---C
Q 023070 13 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F---P 87 (287)
Q Consensus 13 ~Qi~g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g---~ 87 (287)
+-++..++++...| .+.|+|-|||+-.-.. |+ +.-.... ++.+++.+++||.+=||+ | +
T Consensus 4 lEvc~~s~~~a~~A---~~~GAdRIELc~~L~~--------GG-lTPS~g~----i~~~~~~~~ipv~vMIRPR~GdF~Y 67 (256)
T 1twd_A 4 LEICCYSMECALTA---QQNGADRVELCAAPKE--------GG-LTPSLGV----LKSVRQRVTIPVHPIIRPRGGDFCY 67 (256)
T ss_dssp EEEEESSHHHHHHH---HHTTCSEEEECBCGGG--------TC-BCCCHHH----HHHHHHHCCSCEEEBCCSSSSCSCC
T ss_pred EEEEeCCHHHHHHH---HHcCCCEEEEcCCccc--------CC-CCCCHHH----HHHHHHHcCCceEEEECCCCCCCcC
Confidence 34556666554433 3468999999842111 11 2222233 444556678999998887 2 2
Q ss_pred Chhh---HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecC---CCCHHHHHHHHHhcC
Q 023070 88 NLQD---TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGN---VRHMEDVQKCLEETG 160 (287)
Q Consensus 88 ~~~~---~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGg---I~s~~da~~~l~~~g 160 (287)
+..+ ..+-++.+.++|++.|.+-.=+.+ +..|.+.++++.+.. ++||...=- +.++..+.+.|...|
T Consensus 68 s~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d------g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG 141 (256)
T 1twd_A 68 SDGEFAAILEDVRTVRELGFPGLVTGVLDVD------GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELG 141 (256)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEECCBCTT------SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeECCC------CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcC
Confidence 2222 234566788999999988655543 257888888887653 577775432 477888877777779
Q ss_pred ccEEEE
Q 023070 161 CEGVLS 166 (287)
Q Consensus 161 ad~Vmi 166 (287)
++.|.-
T Consensus 142 ~~rILT 147 (256)
T 1twd_A 142 IARVLT 147 (256)
T ss_dssp CCEEEE
T ss_pred CCEEEC
Confidence 998874
No 444
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.46 E-value=0.48 Score=41.61 Aligned_cols=105 Identities=18% Similarity=0.246 Sum_probs=69.2
Q ss_pred CCEEEEec-C--CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 023070 9 RPLFVQFC-A--NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 84 (287)
Q Consensus 9 ~p~~~Qi~-g--~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR 84 (287)
.|+++-+= | .+|++..+.+. ++++|+++|.|=-| ....+.++++++ .++||.--+.
T Consensus 91 ~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg-------------------~~~~~~i~~l~~-~GIpv~gHlg 150 (275)
T 3vav_A 91 ALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGG-------------------EWLAETVRFLVE-RAVPVCAHVG 150 (275)
T ss_dssp SEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECC-------------------GGGHHHHHHHHH-TTCCEEEEEE
T ss_pred CCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCc-------------------hhHHHHHHHHHH-CCCCEEEecC
Confidence 46666654 2 47777666554 56679999888622 123455555554 3778764432
Q ss_pred C--------------CCC---hhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecC
Q 023070 85 V--------------FPN---LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 145 (287)
Q Consensus 85 ~--------------g~~---~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGg 145 (287)
+ |-+ .+++++-++.++++|++.|.+-+. +. +.++++.+.+++|+|+-|.
T Consensus 151 ltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~v----------p~--~~a~~It~~l~iP~igIGa 216 (275)
T 3vav_A 151 LTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAV----------PT--LVAAEVTRELSIPTIGIGA 216 (275)
T ss_dssp SCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESC----------CH--HHHHHHHHHCSSCEEEESS
T ss_pred CCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecCC----------CH--HHHHHHHHhCCCCEEEEcc
Confidence 2 222 235677788899999999988644 12 3678899999999998763
No 445
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.45 E-value=0.1 Score=47.60 Aligned_cols=67 Identities=16% Similarity=0.207 Sum_probs=50.4
Q ss_pred HHHHHHHHHc--CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 93 IKYAKMLEDA--GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 93 ~~~a~~l~~~--G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
.+.++.+.+. |++.+.+|... +. ...-|+.++++++.. ++||++ |++.|++++..+.+ .|+|+|.++
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~-----g~-~~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~a~~-aGaD~I~v~ 189 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVAN-----GY-SEHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEELIL-SGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSC-----TT-BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHH-TTCSEEEEC
T ss_pred HHHHHHHHhccCCCCEEEEEecC-----CC-cHHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHHH-hCCCEEEEC
Confidence 3455666666 99999887421 11 123478899999988 799885 67899999999888 599999886
No 446
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=94.43 E-value=0.14 Score=45.69 Aligned_cols=87 Identities=18% Similarity=0.301 Sum_probs=57.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|+++|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|||
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPTTT-AAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSC-HHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 555667889999999999999998887643211 111224455555543 59998654444545554433 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
++|+-.+.|..|.
T Consensus 114 avlv~~P~y~~~~ 126 (304)
T 3cpr_A 114 GLLVVTPYYSKPS 126 (304)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999999887665
No 447
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.42 E-value=1.9 Score=37.50 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHH----H------HHHHHHhcC
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHME----D------VQKCLEETG 160 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~----d------a~~~l~~~g 160 (287)
...+++...++|++++++. +.. ++.+++.+ +-.++..+||+-.. | ..++++ .|
T Consensus 146 v~~~A~~a~~~G~dGvV~s------------~~e---~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~-aG 209 (259)
T 3tfx_A 146 VLSLAKMAKHSGADGVICS------------PLE---VKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKE-WG 209 (259)
T ss_dssp HHHHHHHHHHTTCCEEECC------------GGG---HHHHHHHHCSSSEEEECCCCCC-----------CHHHHHH-TT
T ss_pred HHHHHHHHHHhCCCEEEEC------------HHH---HHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHH-cC
Confidence 3567888889999998774 122 33444443 33467788886421 1 556666 59
Q ss_pred ccEEEEehhhhhCcc
Q 023070 161 CEGVLSAESLLENPA 175 (287)
Q Consensus 161 ad~VmiGR~~l~nP~ 175 (287)
+|.+++||+++..++
T Consensus 210 ad~iVvGr~I~~a~d 224 (259)
T 3tfx_A 210 SSAIVVGRPITLASD 224 (259)
T ss_dssp CSEEEECHHHHTSSS
T ss_pred CCEEEEChHHhCCCC
Confidence 999999999987554
No 448
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=94.40 E-value=0.15 Score=45.43 Aligned_cols=90 Identities=13% Similarity=0.129 Sum_probs=57.1
Q ss_pred HHHHHHHhhcc-CCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEE
Q 023070 65 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 141 (287)
Q Consensus 65 ~~iv~~v~~~~-~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi 141 (287)
.+.++++++.. ..++.|-++. .+-++.+.++|+|.|-+..-+ .+.++++.+.+ ++.+.
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv~t-------l~e~~eAl~aGaDiImLDn~s------------~~~l~~av~~~~~~v~le 255 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIECDN-------ISQVEESLSNNVDMILLDNMS------------ISEIKKAVDIVNGKSVLE 255 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEESS-------HHHHHHHHHTTCSEEEEESCC------------HHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHHhCCCCCEEEEECC-------HHHHHHHHHcCCCEEEECCCC------------HHHHHHHHHhhcCceEEE
Confidence 35555555543 4566655422 234555667899999886321 23444444332 68899
Q ss_pred EecCCCCHHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 142 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 142 ~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
++||| +++.+.++.+ +|+|.+.+|.-...-|+
T Consensus 256 aSGGI-t~~~i~~~A~-tGVD~IsvGalthsa~~ 287 (300)
T 3l0g_A 256 VSGCV-NIRNVRNIAL-TGVDYISIGCITNSFQN 287 (300)
T ss_dssp EESSC-CTTTHHHHHT-TTCSEEECGGGTSSCCC
T ss_pred EECCC-CHHHHHHHHH-cCCCEEEeCccccCCCc
Confidence 99999 5688887776 79999999955444444
No 449
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.37 E-value=0.11 Score=46.65 Aligned_cols=83 Identities=12% Similarity=0.100 Sum_probs=46.8
Q ss_pred CCHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHH
Q 023070 18 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYA 96 (287)
Q Consensus 18 ~~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a 96 (287)
.+++...+-|+ .+++|+|.||||.-+-.+.....+-.-+.....+.+..+++++++..++||+|...- .+.+
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~-------~~Va 118 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR-------PRVM 118 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC-------HHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC-------HHHH
Confidence 35566655555 678899999999532222110000000112334557778888888789999998432 1334
Q ss_pred HHHHHcCCCEE
Q 023070 97 KMLEDAGCSLL 107 (287)
Q Consensus 97 ~~l~~~G~~~I 107 (287)
+...++|++.|
T Consensus 119 ~aAl~aGa~iI 129 (314)
T 3tr9_A 119 REAVNTGADMI 129 (314)
T ss_dssp HHHHHHTCCEE
T ss_pred HHHHHcCCCEE
Confidence 44444566654
No 450
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.34 E-value=0.68 Score=42.08 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=67.0
Q ss_pred cccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHH
Q 023070 54 GAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK 133 (287)
Q Consensus 54 G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~ 133 (287)
||.=+++..++.++- ..+.||.+|.... +.++....++.+.+.|.+.+.+|+-+.-+. .....|+..|..++
T Consensus 118 ~S~~~~N~pLL~~va-----~~gKPviLstGms-tl~Ei~~Ave~i~~~g~~viLlhC~s~YPt--~~~~~nL~aI~~Lk 189 (350)
T 3g8r_A 118 ASCSFTDWPLLERIA-----RSDKPVVASTAGA-RREDIDKVVSFMLHRGKDLTIMHCVAEYPT--PDDHLHLARIKTLR 189 (350)
T ss_dssp CSSSTTCHHHHHHHH-----TSCSCEEEECTTC-CHHHHHHHHHHHHTTTCCEEEEECCCCSSC--CGGGCCTTHHHHHH
T ss_pred CcccccCHHHHHHHH-----hhCCcEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCC--CcccCCHHHHHHHH
Confidence 555577888766553 2589999997664 778888888888888988667786543221 12247889999999
Q ss_pred hhC-CCcEEEe----cCCCCHHHHHHHHHhcCcc
Q 023070 134 NAL-RIPVLAN----GNVRHMEDVQKCLEETGCE 162 (287)
Q Consensus 134 ~~~-~ipVi~n----GgI~s~~da~~~l~~~gad 162 (287)
+.. ++||..+ |+.. .-+..+.. .||+
T Consensus 190 ~~fp~lpVG~SdHt~g~~~--~~~~AAvA-lGA~ 220 (350)
T 3g8r_A 190 QQYAGVRIGYSTHEDPDLM--EPIMLAVA-QGAT 220 (350)
T ss_dssp HHCTTSEEEEEECCCSSCC--HHHHHHHH-TTCC
T ss_pred HHCCCCCEEcCCCCCCCcc--HHHHHHHH-cCCC
Confidence 988 7999877 3332 22334554 4775
No 451
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.33 E-value=2.4 Score=36.74 Aligned_cols=93 Identities=17% Similarity=0.345 Sum_probs=67.8
Q ss_pred CCCC-EEEEecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc-CCcEEEEe
Q 023070 7 EDRP-LFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKI 83 (287)
Q Consensus 7 ~~~p-~~~Qi~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~-~~pv~vKi 83 (287)
+++| ++|-|.|.+.+++.+.|+.+ ..|+|.||+=+-+ +-. ..+++.+.+.+..+++.. ++|+.+-+
T Consensus 17 ~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~---------l~~--~~~~~~v~~~l~~lr~~~~~lPiI~T~ 85 (258)
T 4h3d_A 17 EGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDF---------FEN--VENIKEVKEVLYELRSYIHDIPLLFTF 85 (258)
T ss_dssp SSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGG---------CTT--TTCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecc---------ccc--cCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3566 67999999999988877654 5689999997431 100 135678889999998876 69999999
Q ss_pred cC----C---CChhhHHHHHHHHHHcC-CCEEEEe
Q 023070 84 RV----F---PNLQDTIKYAKMLEDAG-CSLLAVH 110 (287)
Q Consensus 84 R~----g---~~~~~~~~~a~~l~~~G-~~~I~vh 110 (287)
|. | .+.++..++.+.+.+.| +++|.|-
T Consensus 86 Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvE 120 (258)
T 4h3d_A 86 RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVE 120 (258)
T ss_dssp CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHh
Confidence 97 2 13345566777777776 8999886
No 452
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.33 E-value=0.13 Score=42.68 Aligned_cols=82 Identities=18% Similarity=0.267 Sum_probs=59.0
Q ss_pred CcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCC-CcEEEecCCCCHHHHHHH
Q 023070 77 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHMEDVQKC 155 (287)
Q Consensus 77 ~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~-ipVi~nGgI~s~~da~~~ 155 (287)
.|+..=+|. .+.+++.++++.+.+.|++.|.+|-++.. -.+.++.+++.++ -.+++.|-+.+++++..+
T Consensus 10 ~~~i~~~~~-~~~~~~~~~~~~~~~~G~~~iev~~~~~~---------~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a 79 (205)
T 1wa3_A 10 HKIVAVLRA-NSVEEAKEKALAVFEGGVHLIEITFTVPD---------ADTVIKELSFLKEKGAIIGAGTVTSVEQCRKA 79 (205)
T ss_dssp HCEEEEECC-SSHHHHHHHHHHHHHTTCCEEEEETTSTT---------HHHHHHHTHHHHHTTCEEEEESCCSHHHHHHH
T ss_pred CCEEEEEec-CCHHHHHHHHHHHHHCCCCEEEEeCCChh---------HHHHHHHHHHHCCCCcEEEecccCCHHHHHHH
Confidence 355554543 46678899999999999999999966421 1345777776642 224666778999999999
Q ss_pred HHhcCccEEEEehhh
Q 023070 156 LEETGCEGVLSAESL 170 (287)
Q Consensus 156 l~~~gad~VmiGR~~ 170 (287)
.+ .|+|.| ++-++
T Consensus 80 ~~-~Gad~i-v~~~~ 92 (205)
T 1wa3_A 80 VE-SGAEFI-VSPHL 92 (205)
T ss_dssp HH-HTCSEE-ECSSC
T ss_pred HH-cCCCEE-EcCCC
Confidence 88 599999 76443
No 453
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.31 E-value=0.31 Score=43.80 Aligned_cols=92 Identities=12% Similarity=0.188 Sum_probs=67.2
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCc
Q 023070 60 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 139 (287)
Q Consensus 60 ~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ip 139 (287)
+++.+.+.++.+++..+.|+.+.+-.. + .+..+.++.+.+.|++.|.+|+... .+.++.+++ .++|
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~-~~~~~~~~~a~~~g~d~V~~~~g~p-----------~~~i~~l~~-~g~~ 112 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S-PFVEDIVDLVIEEGVKVVTTGAGNP-----------SKYMERFHE-AGII 112 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S-TTHHHHHHHHHHTTCSEEEECSSCG-----------GGTHHHHHH-TTCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C-CCHHHHHHHHHHCCCCEEEECCCCh-----------HHHHHHHHH-cCCe
Confidence 577778888888877778888876442 1 2345667788899999999996421 234666665 3788
Q ss_pred EEEecCCCCHHHHHHHHHhcCccEEEE-eh
Q 023070 140 VLANGNVRHMEDVQKCLEETGCEGVLS-AE 168 (287)
Q Consensus 140 Vi~nGgI~s~~da~~~l~~~gad~Vmi-GR 168 (287)
|+. .+.+.+++..+.+ .|+|+|.+ |+
T Consensus 113 v~~--~v~~~~~a~~~~~-~GaD~i~v~g~ 139 (332)
T 2z6i_A 113 VIP--VVPSVALAKRMEK-IGADAVIAEGM 139 (332)
T ss_dssp EEE--EESSHHHHHHHHH-TTCSCEEEECT
T ss_pred EEE--EeCCHHHHHHHHH-cCCCEEEEECC
Confidence 885 4789999887776 69999988 54
No 454
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.30 E-value=0.56 Score=41.65 Aligned_cols=159 Identities=12% Similarity=0.125 Sum_probs=91.7
Q ss_pred ecCCCHHHHHHHHHHH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC--Chhh
Q 023070 15 FCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP--NLQD 91 (287)
Q Consensus 15 i~g~~~~~~~~aA~~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~--~~~~ 91 (287)
+...|+-. |+++ +.|||+|=+-=. ....+. -++-....-..+.+...+++|.+.++.||++.+-.|. +..+
T Consensus 22 ~~a~D~~s----A~~~~~aG~~ai~vs~~-~~a~~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~ 95 (295)
T 1xg4_A 22 VGTINANH----ALLAQRAGYQAIYLSGG-GVAAGS-LGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFN 95 (295)
T ss_dssp EECSSHHH----HHHHHHTTCSCEEECHH-HHHHTT-TCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHH
T ss_pred ecCcCHHH----HHHHHHcCCCEEEECch-Hhhhhh-cCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHH
Confidence 44556544 4444 358998876411 111111 1233333446677778888888888999999998875 4678
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCC----CCcccc---HHHHHHHHhhC-CCcEEEecCCCCH-----HHHH---HH
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDG----KKFRAD---WNAIKAVKNAL-RIPVLANGNVRHM-----EDVQ---KC 155 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~----~~~~~~---~~~i~~i~~~~-~ipVi~nGgI~s~-----~da~---~~ 155 (287)
..+.++.+.++|+++|.+-+......-+ ...... .+.|+.++++- ..++..+|..... +++. +.
T Consensus 96 ~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~a 175 (295)
T 1xg4_A 96 VARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQA 175 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHH
Confidence 8889999999999999997654321111 101112 23344444442 3455555544332 2222 22
Q ss_pred HHhcCccEEEEehhhhhCccchhchh
Q 023070 156 LEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 156 l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+.+.|||+|++= .+.++...+++.
T Consensus 176 y~eAGAd~i~~e--~~~~~~~~~~i~ 199 (295)
T 1xg4_A 176 YVEAGAEMLFPE--AITELAMYRQFA 199 (295)
T ss_dssp HHHTTCSEEEET--TCCSHHHHHHHH
T ss_pred HHHcCCCEEEEe--CCCCHHHHHHHH
Confidence 334699999883 234555555554
No 455
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=94.27 E-value=0.13 Score=45.82 Aligned_cols=87 Identities=20% Similarity=0.307 Sum_probs=57.0
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|||
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls-~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLT-SEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 445667888999999999999988877643211 011224455555443 59988654444445554433 447999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+-.+.|..|.
T Consensus 110 avlv~~P~y~~~s 122 (301)
T 1xky_A 110 AVMLVAPYYNKPS 122 (301)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999999887764
No 456
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.22 E-value=0.13 Score=45.65 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGESATLS-VEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcccCC-HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 455667888899999999999988877643211 111223455555543 58998765544556555443 347999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 105 avlv~~P~y~~~~ 117 (297)
T 3flu_A 105 YTLSVVPYYNKPS 117 (297)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988887775
No 457
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.21 E-value=0.63 Score=41.38 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=89.8
Q ss_pred ecCCCHHHHHHHHHHHc-CCCCEEEEec-cCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC-Chhh
Q 023070 15 FCANDPEILLNAARRVE-PYCDYVDINL-GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQD 91 (287)
Q Consensus 15 i~g~~~~~~~~aA~~~~-~g~d~IdiN~-gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-~~~~ 91 (287)
+...|+-. |++++ .|||+|=+-= ++- ... -|+-....-..+.+...+++|.+.+++||++.+-.|+ +..+
T Consensus 27 ~~a~D~~s----A~l~e~aGf~ai~vs~~s~a--~~~-~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~ 99 (298)
T 3eoo_A 27 VGAITAYA----AKMAEAVGFKAVYLSGGGVA--ANS-LGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFN 99 (298)
T ss_dssp EECSSHHH----HHHHHHHTCSCEEECHHHHH--HHT-TCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHH
T ss_pred ecCCCHHH----HHHHHHcCCCEEEECcHHHH--HHh-cCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHH
Confidence 44455543 44443 4888887751 211 111 1122222335666777778887788999999999886 4567
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCCC-Cc--cccH-HHHHHH---HhhC-CCcEEEecCCCCH--HHHHHHH-----
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDGK-KF--RADW-NAIKAV---KNAL-RIPVLANGNVRHM--EDVQKCL----- 156 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~~-~~--~~~~-~~i~~i---~~~~-~ipVi~nGgI~s~--~da~~~l----- 156 (287)
..+.++.++++|+.+|.+-+.....+-+. .+ -.+. +.+.+| +++- +.+++.++...+. +.+.+.+
T Consensus 100 v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~a 179 (298)
T 3eoo_A 100 IARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIA 179 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHh
Confidence 78889999999999999976653221111 01 1122 334444 3332 3445555544332 2222222
Q ss_pred -HhcCccEEEEehhhhhCccchhchh
Q 023070 157 -EETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 157 -~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
.+.|||+|++= .+.++..++++.
T Consensus 180 y~~AGAD~if~~--~~~~~ee~~~~~ 203 (298)
T 3eoo_A 180 YVEAGADMIFPE--AMKTLDDYRRFK 203 (298)
T ss_dssp HHHTTCSEEEEC--CCCSHHHHHHHH
T ss_pred hHhcCCCEEEeC--CCCCHHHHHHHH
Confidence 23599999983 235677666554
No 458
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=94.20 E-value=0.13 Score=45.96 Aligned_cols=87 Identities=22% Similarity=0.331 Sum_probs=58.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+...++++.+.+.|++.|.+.|-|.+..... .....+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESPTTT-DGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCC-HHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 556677889999999999999988877643211 111224455555543 68998765545556665443 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+....|..|.
T Consensus 113 avlv~~P~y~~~s 125 (304)
T 3l21_A 113 GLLVVTPYYSKPP 125 (304)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988887764
No 459
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.18 E-value=0.12 Score=45.74 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=58.4
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... .....+.++.+.+.+ ++|||+.-|-.+.+++.+.. ++.|||
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLT-TDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCC-HHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 455667888899999999999988877643211 011224455555543 69998765555566665443 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 100 avlv~~P~y~~~~ 112 (292)
T 3daq_A 100 AIMLITPYYNKTN 112 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988877664
No 460
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.16 E-value=0.34 Score=42.97 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=60.3
Q ss_pred cCCcEEEEecCCCChhhHHHHHHHHHHcCCC---EEEEeccCCCCcCCCCcccc----HHHHHHHHhhCCCcEEE--ecC
Q 023070 75 LNVPVSCKIRVFPNLQDTIKYAKMLEDAGCS---LLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLA--NGN 145 (287)
Q Consensus 75 ~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~---~I~vh~rt~~~~~~~~~~~~----~~~i~~i~~~~~ipVi~--nGg 145 (287)
.+.|+.+-+. +.+.++..+.++.+.++|+| +|.++-.............+ ++.++.+++.+++||++ +++
T Consensus 92 ~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 92 SKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred CCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4789888875 56778889999999999999 89998532221100000112 46778888877889874 455
Q ss_pred CCCHHHH---HHHHHhcC-ccEEEEe
Q 023070 146 VRHMEDV---QKCLEETG-CEGVLSA 167 (287)
Q Consensus 146 I~s~~da---~~~l~~~g-ad~VmiG 167 (287)
+ +.+++ .+.+.+.| +|+|.+.
T Consensus 171 ~-~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 F-DIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp C-CHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred C-CHHHHHHHHHHHHhcCCceEEEEe
Confidence 5 55664 33445579 9999753
No 461
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.14 E-value=0.12 Score=46.44 Aligned_cols=87 Identities=16% Similarity=0.280 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.. ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls-~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESATLD-VEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 455667888889999999999988877643211 011123444444443 58998765555556655443 347999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 121 avlv~~P~y~~~s 133 (314)
T 3qze_A 121 ACLLVTPYYNKPT 133 (314)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999998887775
No 462
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.13 E-value=0.13 Score=49.41 Aligned_cols=72 Identities=22% Similarity=0.321 Sum_probs=54.5
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
.+..+-++.|.++|+|.|+|..-.. . ...-++.++.+++.. ++|||+ |+|-|.+.+..+++ .|||+|-+|-
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahG-----h-s~~v~~~i~~ik~~~p~~~via-GNVaT~e~a~~Li~-aGAD~vkVGi 351 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQG-----N-SVYQIEFIKWIKQTYPKIDVIA-GNVVTREQAAQLIA-AGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCC-----C-SHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHH-HTCSEEEECS
T ss_pred ccHHHHHHHHHhcCCcEEEEecccc-----c-cHHHHHHHHHHHhhCCcceEEe-ccccCHHHHHHHHH-cCCCEEeecC
Confidence 4567889999999999998842211 1 023467888888875 577665 89999999999888 5999999886
Q ss_pred h
Q 023070 169 S 169 (287)
Q Consensus 169 ~ 169 (287)
|
T Consensus 352 G 352 (556)
T 4af0_A 352 G 352 (556)
T ss_dssp S
T ss_pred C
Confidence 5
No 463
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=94.08 E-value=0.13 Score=45.51 Aligned_cols=87 Identities=15% Similarity=0.266 Sum_probs=58.2
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLS-MEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccccccCC-HHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 555667888899999999999988877643211 111224455555543 58998765545556655443 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 99 avlv~~P~y~~~~ 111 (291)
T 3tak_A 99 AALLVTPYYNKPT 111 (291)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999998887775
No 464
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.07 E-value=0.15 Score=43.52 Aligned_cols=86 Identities=12% Similarity=0.147 Sum_probs=57.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCC-----------cccc----HHHHHHHHhhCCCcEEEecCCCC----
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-----------FRAD----WNAIKAVKNALRIPVLANGNVRH---- 148 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~-----------~~~~----~~~i~~i~~~~~ipVi~nGgI~s---- 148 (287)
+.+++.+.++.+++. ++.|.+.--..+....++ ...+ .+.++++++.+++||..-++++.
T Consensus 17 ~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 17 DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRA 95 (248)
T ss_dssp CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhc
Confidence 446888999999999 999988511111111000 0012 57888999888999988766554
Q ss_pred --HHHHHHHHHhcCccEEEEehhhhhCcc
Q 023070 149 --MEDVQKCLEETGCEGVLSAESLLENPA 175 (287)
Q Consensus 149 --~~da~~~l~~~gad~VmiGR~~l~nP~ 175 (287)
.+.+..+++ .|+|+|.++--...++.
T Consensus 96 ~~~~~~~~~~~-~Gad~v~~~~~~~~~~~ 123 (248)
T 1geq_A 96 GVRNFLAEAKA-SGVDGILVVDLPVFHAK 123 (248)
T ss_dssp CHHHHHHHHHH-HTCCEEEETTCCGGGHH
T ss_pred CHHHHHHHHHH-CCCCEEEECCCChhhHH
Confidence 466777776 69999999855444444
No 465
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=94.07 E-value=0.19 Score=42.89 Aligned_cols=41 Identities=24% Similarity=0.436 Sum_probs=35.1
Q ss_pred CCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 137 RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 137 ~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
+++|++.|||++.+++..+.. .|+||+.||.+++.-+++..
T Consensus 173 ~~~ilyggsV~~~n~~~~~~~-~giDG~LVG~a~l~a~~~~~ 213 (226)
T 1w0m_A 173 EVSVITGAGIESGDDVAAALR-LGTRGVLLASAAVKAKDPYA 213 (226)
T ss_dssp TSEEEEESSCCSHHHHHHHHH-TTCSEEEECHHHHTCSSHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHh-CCCCEEEECHHHHCCcCHHH
Confidence 589999999999999987776 69999999999997766544
No 466
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.07 E-value=0.14 Score=45.46 Aligned_cols=87 Identities=16% Similarity=0.222 Sum_probs=57.8
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHHH---hcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLE---ETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l~---~~gad 162 (287)
|.+...++++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+..+ ..|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGESATLN-HDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 455667888999999999999988877643211 011224455555443 589986544445565554443 36999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+-.+.|..|.
T Consensus 99 avlv~~P~y~~~s 111 (292)
T 2ojp_A 99 GCLTVTPYYNRPS 111 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999999887664
No 467
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.06 E-value=0.15 Score=45.30 Aligned_cols=87 Identities=16% Similarity=0.157 Sum_probs=57.6
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+...++++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVG-SRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC-HHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 455667888999999999999998877643211 011234555566655 48988554444555554433 346999
Q ss_pred EEEEehhhhhC-cc
Q 023070 163 GVLSAESLLEN-PA 175 (287)
Q Consensus 163 ~VmiGR~~l~n-P~ 175 (287)
+||+....|.. |.
T Consensus 101 avlv~~P~y~~~~s 114 (294)
T 3b4u_A 101 NILLAPPSYFKNVS 114 (294)
T ss_dssp EEEECCCCSSCSCC
T ss_pred EEEEcCCcCCCCCC
Confidence 99999888866 53
No 468
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=94.02 E-value=0.14 Score=45.60 Aligned_cols=87 Identities=13% Similarity=0.115 Sum_probs=56.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|.|.+..... ..-..+.++.+.+.+ ++|||+.=|=.+.+++.+.. +..|+|
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls-~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQS-LSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 455667888999999999999988877643211 011224455555543 69998654444445554333 446999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
++|+-.+.|..|.
T Consensus 109 avlv~~P~y~~~s 121 (303)
T 2wkj_A 109 AVSAVTPFYYPFS 121 (303)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEecCCCCCCCC
Confidence 9999999887664
No 469
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.01 E-value=0.24 Score=41.34 Aligned_cols=83 Identities=5% Similarity=0.009 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEec--cCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEE
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHG--RTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 165 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~--rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~Vm 165 (287)
+..+..+.++.+.+.|++++.+-- .+... . .....+.++++++.++.|+.+-+.|.++++..+.+...|+|+|.
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~--~--~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~ 89 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDIMDGQFVP--N--ISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMT 89 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS--C--BCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeecCCCCC--c--cccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEE
Confidence 556777888999999999976542 11111 1 12337889999988888999999999987533444457999999
Q ss_pred EehhhhhCc
Q 023070 166 SAESLLENP 174 (287)
Q Consensus 166 iGR~~l~nP 174 (287)
+.-.....|
T Consensus 90 vh~~~~~~~ 98 (220)
T 2fli_A 90 IHTESTRHI 98 (220)
T ss_dssp EEGGGCSCH
T ss_pred EccCccccH
Confidence 975544443
No 470
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=94.00 E-value=0.24 Score=43.04 Aligned_cols=148 Identities=18% Similarity=0.156 Sum_probs=85.9
Q ss_pred HHHH-cCCCCEEEEe-ccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCC
Q 023070 27 ARRV-EPYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 104 (287)
Q Consensus 27 A~~~-~~g~d~IdiN-~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~ 104 (287)
|+++ +.|||.|=+- .+.- . .-|+-....-..+.+...+++|.+.++.||++.+-.|+.... .+.++++.++|+
T Consensus 33 A~~~~~aG~dai~vg~~s~a--~--~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~-~~~~~~l~~aGa 107 (255)
T 2qiw_A 33 AGLVEEAGFSGLTIGSHPVA--D--ATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP-ADLIAQILEAGA 107 (255)
T ss_dssp HHHHHHTTCSCEEECHHHHH--H--HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH-HHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEChHHHH--H--hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH-HHHHHHHHHcCC
Confidence 4444 3588888664 1111 1 123333344566777788888888889999999998853223 788889999999
Q ss_pred CEEEEeccCCC-CcCCCCccccHHHHHHHHhh---CCCcEEEecCCCC-----------HHHHH---HHHHhcCccEEEE
Q 023070 105 SLLAVHGRTRD-EKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRH-----------MEDVQ---KCLEETGCEGVLS 166 (287)
Q Consensus 105 ~~I~vh~rt~~-~~~~~~~~~~~~~i~~i~~~---~~ipVi~nGgI~s-----------~~da~---~~l~~~gad~Vmi 166 (287)
.+|.+-+.... .+.-.+...-.+.|+.+++. .++|+..+|-... .+++. +.+++.|||+|++
T Consensus 108 ~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~ 187 (255)
T 2qiw_A 108 VGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYP 187 (255)
T ss_dssp CEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEE
Confidence 99999654311 00001001122445555544 2578666664432 23332 1233469999998
Q ss_pred ehhhhhCccchhchh
Q 023070 167 AESLLENPALFAGFR 181 (287)
Q Consensus 167 GR~~l~nP~lf~~~~ 181 (287)
= .+.++...+++.
T Consensus 188 e--~~~~~~~~~~i~ 200 (255)
T 2qiw_A 188 V--GLSTAEQVERLV 200 (255)
T ss_dssp C--CCCSHHHHHHHH
T ss_pred c--CCCCHHHHHHHH
Confidence 2 244445555553
No 471
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=93.99 E-value=0.31 Score=47.26 Aligned_cols=94 Identities=21% Similarity=0.283 Sum_probs=58.1
Q ss_pred HHHHHHH-HHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHH
Q 023070 21 EILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKML 99 (287)
Q Consensus 21 ~~~~~aA-~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l 99 (287)
+...+-| +.+++|+|.||||.| +......+.+.+++..+++.+++||++... + .+.++..
T Consensus 340 ~~a~~~A~~~v~~GAdiIDIgpg------------~~~v~~~ee~~rvv~~i~~~~~vpisIDT~------~-~~v~eaa 400 (566)
T 1q7z_A 340 EIVIKEAKTQVEKGAEVLDVNFG------------IESQIDVRYVEKIVQTLPYVSNVPLSLDIQ------N-VDLTERA 400 (566)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECS------------SGGGSCHHHHHHHHHHHHHHTCSCEEEECC------C-HHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCC------------CCCCCHHHHHHHHHHHHHhhCCceEEEeCC------C-HHHHHHH
Confidence 3333334 367889999999943 333456788888888888777999999832 1 2345555
Q ss_pred HHc--CCCEE-EEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe
Q 023070 100 EDA--GCSLL-AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 100 ~~~--G~~~I-~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n 143 (287)
.++ |++.| .|++-. ..++.+..+....+.||++-
T Consensus 401 l~~~~G~~iINdis~~~----------~~~~~~~~~~~~~g~~vV~m 437 (566)
T 1q7z_A 401 LRAYPGRSLFNSAKVDE----------EELEMKINLLKKYGGTLIVL 437 (566)
T ss_dssp HHHCSSCCEEEEEESCH----------HHHHHHHHHHHHHCCEEEEE
T ss_pred HHhcCCCCEEEECCcch----------hhHHHHHHHHHHhCCeEEEE
Confidence 555 88876 444321 11233344444457777763
No 472
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.99 E-value=0.14 Score=45.24 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=57.9
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCc
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 161 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~ga 161 (287)
.|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMT-ETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGV 97 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCC
Confidence 3555667888999999999999988877643211 011224455555443 59988654444555554443 44699
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|++|+-.+.|..|.
T Consensus 98 davlv~~P~y~~~s 111 (291)
T 3a5f_A 98 DGLLVITPYYNKTT 111 (291)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999998887664
No 473
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=93.94 E-value=0.14 Score=45.31 Aligned_cols=87 Identities=13% Similarity=0.071 Sum_probs=57.4
Q ss_pred ChhhHHHHHHHHHH-cCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCc
Q 023070 88 NLQDTIKYAKMLED-AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 161 (287)
Q Consensus 88 ~~~~~~~~a~~l~~-~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~ga 161 (287)
|.+....+++.+.+ .|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLS-TEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSC-HHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccchhhCC-HHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 45566788888999 9999999988877643211 011224455555543 59998654444555554443 34699
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|+||+-.+.|..|.
T Consensus 101 davlv~~P~y~~~~ 114 (293)
T 1f6k_A 101 DCLSAVTPFYYKFS 114 (293)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999999887775
No 474
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=93.92 E-value=0.15 Score=45.02 Aligned_cols=88 Identities=19% Similarity=0.294 Sum_probs=57.8
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCc
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 161 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~ga 161 (287)
.|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLS-HEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCC
Confidence 3566677889999999999999988877643211 111224455555443 59988554444445554333 44699
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|++|+-.+.|..|.
T Consensus 97 davlv~~P~y~~~s 110 (289)
T 2yxg_A 97 DAVLSITPYYNKPT 110 (289)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999998887664
No 475
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=93.91 E-value=0.19 Score=44.71 Aligned_cols=83 Identities=24% Similarity=0.309 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcCCCEEEEeccC-CCCc--CCCCccccHHHHHHHHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEe
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRT-RDEK--DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 167 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt-~~~~--~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiG 167 (287)
+..++++.+++.|+++|.+.... .... .+.....+.+.++++++.+++||+++-.+...++++.+++ .|||+|. +
T Consensus 29 ~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a-~GAd~V~-~ 106 (305)
T 2nv1_A 29 INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEA-MGVDYID-E 106 (305)
T ss_dssp SSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHH-HTCSEEE-E
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHHH-CCCCEEE-E
Confidence 44678999999999999543210 0000 0100124678899999999999996433333677777776 6999996 6
Q ss_pred hhhhhCcc
Q 023070 168 ESLLENPA 175 (287)
Q Consensus 168 R~~l~nP~ 175 (287)
...+..++
T Consensus 107 ~~~l~~~~ 114 (305)
T 2nv1_A 107 SEVLTPAD 114 (305)
T ss_dssp CTTSCCSC
T ss_pred eccCCHHH
Confidence 66553333
No 476
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=93.90 E-value=0.15 Score=45.30 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=57.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGESPTLT-FEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 556677889999999999999988877643211 011224455555543 59988654444555554433 447999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+-.+.|..|.
T Consensus 98 avlv~~P~y~~~s 110 (294)
T 2ehh_A 98 GALVVVPYYNKPT 110 (294)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999998887664
No 477
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=93.82 E-value=0.16 Score=45.41 Aligned_cols=88 Identities=19% Similarity=0.300 Sum_probs=58.0
Q ss_pred CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCc
Q 023070 87 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 161 (287)
Q Consensus 87 ~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~ga 161 (287)
.|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.||
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls-~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVN-EDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCC-HHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCC-HHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCC
Confidence 3566677889999999999999988877643211 011224455555443 58988654444545554433 34699
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|+||+-.+.|..|.
T Consensus 109 davlv~~P~y~~~s 122 (306)
T 1o5k_A 109 NGVLVVTPYYNKPT 122 (306)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999999887764
No 478
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=93.82 E-value=0.12 Score=46.39 Aligned_cols=87 Identities=15% Similarity=0.237 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|||
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls-~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPTLT-HEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccccC-HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 455667888999999999999988876643211 111224455555543 58988765545556655443 347999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 120 avlv~~P~y~~~~ 132 (315)
T 3si9_A 120 AVLVVTPYYNRPN 132 (315)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999998887774
No 479
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=93.79 E-value=0.15 Score=45.09 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=40.5
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 84 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR 84 (287)
+++...+.|+ .+++|+|.||||.-+.-+ +.---+.....+.+..+++++++..++||++...
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrP----ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~ 98 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRP----GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS 98 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCST----TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC----CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCC
Confidence 4566666555 678899999999733111 1001122345667888888888777999999853
No 480
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=93.73 E-value=0.15 Score=43.20 Aligned_cols=135 Identities=10% Similarity=-0.019 Sum_probs=79.5
Q ss_pred CCCEEEEec-CCCHHHHHHHHHHHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCC
Q 023070 8 DRPLFVQFC-ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 86 (287)
Q Consensus 8 ~~p~~~Qi~-g~~~~~~~~aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g 86 (287)
+.+++.=+= +.-|.....+++.+...+|.+.+|..... ...++ .. +. +.-|++=..+.
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~ad~vTvh~~~G~---------~~~~~------~~-~~-----~~~v~vLts~s 108 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDITNSFIAHAFVGV---------EGSLA------SL-SQ-----RVDLFLVLSMS 108 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTTCSEEEEEGGGCT---------TTTHH------HH-HH-----HSEEEEECCCS
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHhhheEEEeCCCCc---------HHHHH------hH-hc-----CCCEEEEEecC
Confidence 345554443 33455556666654333999999942110 11111 11 11 11244333332
Q ss_pred ---CChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecCCCCHH--HHHHHHHhcCc
Q 023070 87 ---PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHME--DVQKCLEETGC 161 (287)
Q Consensus 87 ---~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGgI~s~~--da~~~l~~~ga 161 (287)
+..+....+++...++|++++++.+. ..+.++.+++.++-.++..+||+. + +..++++ .|+
T Consensus 109 ~~~~~~~~v~~~a~~a~~~G~~GvV~sat------------~~~e~~~ir~~~~~f~~v~pGI~~-~g~~~~~a~~-~Ga 174 (215)
T 3ve9_A 109 HPGWNDAFYPYLREVARRVNPKGFVAPAT------------RPSMISRVKGDFPDKLVISPGVGT-QGAKPGIALC-HGA 174 (215)
T ss_dssp STTCCGGGHHHHHHHHHHHCCSEEECCTT------------SHHHHHHHHHHCTTSEEEECCTTS-TTCCTTHHHH-TTC
T ss_pred CcchHHHHHHHHHHHHHHcCCCceeeCCC------------CHHHHHHHHHhCCCcEEEcCCCCc-CcCCHHHHHH-cCC
Confidence 11334677888889999998876422 224566777765337888899974 3 5566776 599
Q ss_pred cEEEEehhhhhCccch
Q 023070 162 EGVLSAESLLENPALF 177 (287)
Q Consensus 162 d~VmiGR~~l~nP~lf 177 (287)
|.+.+||+++..++-.
T Consensus 175 d~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 175 DYEIVGRSVYQSADPV 190 (215)
T ss_dssp SEEEECHHHHTSSSHH
T ss_pred CEEEeCHHHcCCCCHH
Confidence 9999999999765543
No 481
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=93.72 E-value=0.16 Score=46.20 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=57.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|||
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls-~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLG-AEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 455667889999999999999988877643211 011224455555543 58998654444555554443 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+-.+.|..|.
T Consensus 129 avlv~~P~Y~~~s 141 (343)
T 2v9d_A 129 GIVVINPYYWKVS 141 (343)
T ss_dssp EEEEECCSSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999999887664
No 482
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.62 E-value=0.15 Score=46.15 Aligned_cols=87 Identities=16% Similarity=0.116 Sum_probs=56.7
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|+|
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls-~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYMYLT-REERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 455667888999999999999988877643211 011224455555543 59998544434445554333 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 132 avlv~~P~Y~~~s 144 (332)
T 2r8w_A 132 ALLLAPVSYTPLT 144 (332)
T ss_dssp EEEECCCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999998887664
No 483
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.58 E-value=0.24 Score=42.14 Aligned_cols=120 Identities=14% Similarity=0.078 Sum_probs=77.0
Q ss_pred cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecC--C---CChhh---HHHHHHHHHHc
Q 023070 31 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F---PNLQD---TIKYAKMLEDA 102 (287)
Q Consensus 31 ~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~--g---~~~~~---~~~~a~~l~~~ 102 (287)
+.|+|-|||+-.-.. |+ +.-....+..+..+ .+.+++||.+=||+ | ++..+ ..+-++.+.++
T Consensus 19 ~~GAdRIELc~~L~~--------GG-lTPS~g~i~~~~~~-~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 88 (224)
T 2bdq_A 19 KAIISRVELCDNLAV--------GG-TTPSYGVIKEANQY-LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVEL 88 (224)
T ss_dssp TTTCCEEEEEBCGGG--------TC-BCCCHHHHHHHHHH-HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HcCCCEEEEcCCccc--------CC-cCCCHHHHHHHHHh-hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Confidence 458999999842111 11 22233333333211 15678999998887 2 22222 23456678899
Q ss_pred CCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecC---C--CCHHHHHHHHHhcCccEEEE
Q 023070 103 GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGN---V--RHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 103 G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGg---I--~s~~da~~~l~~~gad~Vmi 166 (287)
|++.|.+-.=+.+. ..|.+.++++.+.. ++||...=- + .++..+.+.|...|++.|.-
T Consensus 89 GadGvV~G~Lt~dg------~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILT 152 (224)
T 2bdq_A 89 ESDALVLGILTSNN------HIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILL 152 (224)
T ss_dssp TCSEEEECCBCTTS------SBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEeeECCCC------CcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEEC
Confidence 99999886555442 58889888887653 688876543 3 77888877777789998873
No 484
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.53 E-value=0.16 Score=45.14 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=58.5
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC---CCcEEEecCCCCHHHHHHHH---HhcCc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL---RIPVLANGNVRHMEDVQKCL---EETGC 161 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~---~ipVi~nGgI~s~~da~~~l---~~~ga 161 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... .....+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls-~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESATLT-HEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSC-HHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 556677889999999999999988877643211 011223455555443 58998765545556665443 34699
Q ss_pred cEEEEehhhhhCcc
Q 023070 162 EGVLSAESLLENPA 175 (287)
Q Consensus 162 d~VmiGR~~l~nP~ 175 (287)
|+||+-.+.|..|.
T Consensus 105 davlv~~P~y~~~s 118 (301)
T 3m5v_A 105 DGILSVAPYYNKPT 118 (301)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999998887775
No 485
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=93.51 E-value=0.36 Score=42.08 Aligned_cols=115 Identities=16% Similarity=0.198 Sum_probs=70.6
Q ss_pred cccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCC-ccccHHHHH
Q 023070 52 NYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIK 130 (287)
Q Consensus 52 ~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~-~~~~~~~i~ 130 (287)
..|=.+..+.+.+.++++.+++. ++.||+=|-. + .+-++...+.|++.|-+|........... ....++.+.
T Consensus 132 egGlDv~~~~~~L~~~i~~L~~~-GIrVSLFIDp--d----~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~ 204 (278)
T 3gk0_A 132 EGGLDVVGHFDAVRAACKQLADA-GVRVSLFIDP--D----EAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIA 204 (278)
T ss_dssp SSSBCTTTTHHHHHHHHHHHHHT-TCEEEEEECS--C----HHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHH
T ss_pred CcchhhhccHHHHHHHHHHHHHC-CCEEEEEeCC--C----HHHHHHHHHhCcCEEEEecchhhccCCchhHHHHHHHHH
Confidence 33556778899999999998764 7777766522 2 23355666899999999854322111100 011222222
Q ss_pred H---HHhhCCCcEEEecCCCCHHHHHHHHHhcCccEEEEehhhhhCc
Q 023070 131 A---VKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 174 (287)
Q Consensus 131 ~---i~~~~~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR~~l~nP 174 (287)
. .....++-|-+..|+. ++.+..+..-.+..-|-||.+++++-
T Consensus 205 ~aA~~A~~lGL~VnAGHGL~-y~Nv~~ia~ip~i~ElnIGHaiIa~A 250 (278)
T 3gk0_A 205 TGVDAGIALGLKVNAGHGLH-YTNVQAIAALPGIAELNIGHAIVAHA 250 (278)
T ss_dssp HHHHHHHHTTCEEEECTTCC-TTTHHHHHTCTTEEEEEECHHHHHHH
T ss_pred HHHHHHHHcCCEEecCCCCC-HHHHHHHHhCCCCeEEecCHHHHHHH
Confidence 2 2234577787877773 45555443335788899999988654
No 486
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=93.50 E-value=0.14 Score=45.51 Aligned_cols=87 Identities=15% Similarity=0.212 Sum_probs=56.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|.|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGESPTLT-EEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSC-HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCC-HHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCC
Confidence 555667888999999999999988877643211 011224455555443 58987554444445554333 446999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+-.+.|..|.
T Consensus 98 avlv~~P~y~~~s 110 (297)
T 2rfg_A 98 AVLCVAGYYNRPS 110 (297)
T ss_dssp EEEECCCTTTCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999999887664
No 487
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=93.49 E-value=0.54 Score=39.99 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=68.8
Q ss_pred HHHHHHHHhhccCCcEEEEecCCCChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEe
Q 023070 64 VKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 143 (287)
Q Consensus 64 ~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~n 143 (287)
..++++.+.+. |+..=+|. .+.++..++++.+.+.|++.|.+.-++ +...+.++++++..+--+++.
T Consensus 16 ~~~~~~~l~~~---~ii~V~r~-~~~~~~~~~~~al~~gGv~~iel~~k~---------~~~~~~i~~l~~~~~~~~iga 82 (225)
T 1mxs_A 16 AARIDAICEKA---RILPVITI-AREEDILPLADALAAGGIRTLEVTLRS---------QHGLKAIQVLREQRPELCVGA 82 (225)
T ss_dssp HHHHHHHHHHH---SEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEESSS---------THHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHC---CEEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEecCC---------ccHHHHHHHHHHhCcccEEee
Confidence 44455555443 44444443 466788999999999999999997432 223467887877764345666
Q ss_pred cCCCCHHHHHHHHHhcCccEEEEehhhhhCccchh
Q 023070 144 GNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 178 (287)
Q Consensus 144 GgI~s~~da~~~l~~~gad~VmiGR~~l~nP~lf~ 178 (287)
|-+.+.+++..+++ .|||+|.+|- .++.+..
T Consensus 83 gtvl~~d~~~~A~~-aGAd~v~~p~---~d~~v~~ 113 (225)
T 1mxs_A 83 GTVLDRSMFAAVEA-AGAQFVVTPG---ITEDILE 113 (225)
T ss_dssp ECCCSHHHHHHHHH-HTCSSEECSS---CCHHHHH
T ss_pred CeEeeHHHHHHHHH-CCCCEEEeCC---CCHHHHH
Confidence 77999999999998 5999999873 4665544
No 488
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=93.43 E-value=0.79 Score=40.66 Aligned_cols=158 Identities=15% Similarity=0.127 Sum_probs=84.5
Q ss_pred ecCCCHHHHHHHHHHHc-CCCCEEEEe-ccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCC-Chhh
Q 023070 15 FCANDPEILLNAARRVE-PYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQD 91 (287)
Q Consensus 15 i~g~~~~~~~~aA~~~~-~g~d~IdiN-~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~-~~~~ 91 (287)
+...|+-. |++++ .|||+|=+- .++-. .-|+-....-..+.+...+++|.+.+++||++.+-.|+ +..+
T Consensus 24 ~~a~D~~s----A~~~~~aG~~ai~vsg~~~a~----~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~ 95 (295)
T 1s2w_A 24 MEAHNGLS----ARIVQEAGFKGIWGSGLSVSA----QLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNN 95 (295)
T ss_dssp EEECSHHH----HHHHHHHTCSCEEECCHHHHH----TC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHH
T ss_pred ecCCCHHH----HHHHHHcCCCEEEeChHHHHH----hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHH
Confidence 44456544 44443 488888775 22221 11122222334556677778888888999999998874 3456
Q ss_pred HHHHHHHHHHcCCCEEEEeccCCCCcCC------CCc-cc--cHHHHHHHHhhC---CCcEEEecCCC----CHHHHH--
Q 023070 92 TIKYAKMLEDAGCSLLAVHGRTRDEKDG------KKF-RA--DWNAIKAVKNAL---RIPVLANGNVR----HMEDVQ-- 153 (287)
Q Consensus 92 ~~~~a~~l~~~G~~~I~vh~rt~~~~~~------~~~-~~--~~~~i~~i~~~~---~ipVi~nGgI~----s~~da~-- 153 (287)
+.+.++.+.++|+.+|.+-+.....+-+ ... +. ..+.|+.++++- +.-|++=.+-. ..+++.
T Consensus 96 v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~R 175 (295)
T 1s2w_A 96 ARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKR 175 (295)
T ss_dssp HHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHH
Confidence 7788999999999999997654211100 000 11 133444454442 23344433332 124443
Q ss_pred -HHHHhcCccEEEEehhhhhCccchhchh
Q 023070 154 -KCLEETGCEGVLSAESLLENPALFAGFR 181 (287)
Q Consensus 154 -~~l~~~gad~VmiGR~~l~nP~lf~~~~ 181 (287)
+.+.+.|||+|++=- .+.++..++++.
T Consensus 176 a~ay~eAGAd~i~~e~-~~~~~~~~~~i~ 203 (295)
T 1s2w_A 176 AEAYRNAGADAILMHS-KKADPSDIEAFM 203 (295)
T ss_dssp HHHHHHTTCSEEEECC-CSSSSHHHHHHH
T ss_pred HHHHHHcCCCEEEEcC-CCCCHHHHHHHH
Confidence 223346999999821 133455555543
No 489
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.43 E-value=0.78 Score=41.86 Aligned_cols=81 Identities=10% Similarity=-0.041 Sum_probs=56.3
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhcc--CCcEEEEecCCCChhhHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 95 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~--~~pv~vKiR~g~~~~~~~~~ 95 (287)
|.+.+.+-++ .++.|+|+|=++- .-|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++++
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~G----------TTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~l 146 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGG----------TTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG-SNSTREAIHA 146 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecc----------cccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHHHH
Confidence 6677777776 5678999998872 123333334444456666655544 488888752 2467889999
Q ss_pred HHHHHHcCCCEEEEe
Q 023070 96 AKMLEDAGCSLLAVH 110 (287)
Q Consensus 96 a~~l~~~G~~~I~vh 110 (287)
++.+++.|+|++.+.
T Consensus 147 a~~A~~~Gadavlvv 161 (360)
T 4dpp_A 147 TEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHTTCSEEEEE
T ss_pred HHHHHHcCCCEEEEc
Confidence 999999999999775
No 490
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.41 E-value=0.13 Score=46.08 Aligned_cols=87 Identities=15% Similarity=0.074 Sum_probs=58.0
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+-|-|.+..... .....+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|||
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls-~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAYLS-DPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSC-HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 455667888999999999999988877643211 011224455555543 58988765544556555443 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+..+.|..|.
T Consensus 122 avlv~~P~y~~~s 134 (315)
T 3na8_A 122 AVMVLPISYWKLN 134 (315)
T ss_dssp EEEECCCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999998887765
No 491
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=93.32 E-value=0.47 Score=41.52 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=47.6
Q ss_pred CHHHHHH-HHHHHcCCCCEEEEeccCChhhhhcCcccccc---cCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHH
Q 023070 19 DPEILLN-AARRVEPYCDYVDINLGCPQRIARRGNYGAFL---MDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIK 94 (287)
Q Consensus 19 ~~~~~~~-aA~~~~~g~d~IdiN~gcP~~~~~~~~~G~~l---~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~ 94 (287)
+++...+ |-+++++|+|.|||..-+--+ |+.. ....+.+.-+++++++ .++||+|..+- .+
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTRP-------ga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~-------~~ 92 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTRP-------GHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFR-------SE 92 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCST-------TCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSC-------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCC-------CCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCC-------HH
Confidence 3444433 334678899999997322112 2222 2344567777788765 58999998432 24
Q ss_pred HHHHHHHcCCCEE-EEec
Q 023070 95 YAKMLEDAGCSLL-AVHG 111 (287)
Q Consensus 95 ~a~~l~~~G~~~I-~vh~ 111 (287)
.++...++|++.| .|++
T Consensus 93 Va~~al~aGa~iINDVs~ 110 (270)
T 4hb7_A 93 VAEACLKLGVDMINDQWA 110 (270)
T ss_dssp HHHHHHHHTCCEEEETTT
T ss_pred HHHHHHHhccceeccccc
Confidence 5677777888877 3443
No 492
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=93.30 E-value=0.33 Score=45.24 Aligned_cols=70 Identities=14% Similarity=0.320 Sum_probs=52.3
Q ss_pred CChhhHHHHHH-HHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEEEecC-CCCHHHHHHHHHhcCccEE
Q 023070 87 PNLQDTIKYAK-MLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN-VRHMEDVQKCLEETGCEGV 164 (287)
Q Consensus 87 ~~~~~~~~~a~-~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi~nGg-I~s~~da~~~l~~~gad~V 164 (287)
|+.+++++++. .+++.++.+| ++.- .+.||+..+++++..++||.+.=- +.++.++.++++...+|.|
T Consensus 267 ~~~~~ai~~~~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i 336 (427)
T 2pa6_A 267 LTREELLDYYKALVDEYPIVSI-------EDPF---HEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANAL 336 (427)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE-------ECCS---CTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHHhhCCCcEE-------EcCC---ChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEE
Confidence 36667777754 7888876554 2211 135889999999999999977655 5669999999998789999
Q ss_pred EE
Q 023070 165 LS 166 (287)
Q Consensus 165 mi 166 (287)
.+
T Consensus 337 ~i 338 (427)
T 2pa6_A 337 LL 338 (427)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 493
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.22 E-value=0.46 Score=41.07 Aligned_cols=101 Identities=18% Similarity=0.225 Sum_probs=59.0
Q ss_pred HHHHHHHhhccCCcEEEEecCC-CChhhHHHHHHHHHHcCCCEEEEeccCCCCcC---------------CCCccccHHH
Q 023070 65 KSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD---------------GKKFRADWNA 128 (287)
Q Consensus 65 ~~iv~~v~~~~~~pv~vKiR~g-~~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~---------------~~~~~~~~~~ 128 (287)
.+.+..+++.-...+..-+-.| ++.+++.+.++.+++.|+|.|.+-.-..++.. +.....-++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~ 85 (262)
T 1rd5_A 6 SDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEM 85 (262)
T ss_dssp HHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3444454433233333333233 34578889999999999999998422211110 0000112467
Q ss_pred HHHHHhhCCCcEEEecCCCCHH---HHHHHHHhcCccEEEEe
Q 023070 129 IKAVKNALRIPVLANGNVRHME---DVQKCLEETGCEGVLSA 167 (287)
Q Consensus 129 i~~i~~~~~ipVi~nGgI~s~~---da~~~l~~~gad~VmiG 167 (287)
++++++.+++||++++.. ++. .+..+.+ .|+|+|.+.
T Consensus 86 i~~ir~~~~~Pv~~m~~~-~~~~~~~~~~a~~-aGadgv~v~ 125 (262)
T 1rd5_A 86 LREVTPELSCPVVLLSYY-KPIMFRSLAKMKE-AGVHGLIVP 125 (262)
T ss_dssp HHHHGGGCSSCEEEECCS-HHHHSCCTHHHHH-TTCCEEECT
T ss_pred HHHHHhcCCCCEEEEecC-cHHHHHHHHHHHH-cCCCEEEEc
Confidence 888888889999987532 222 1223454 799999985
No 494
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=93.20 E-value=0.87 Score=39.99 Aligned_cols=121 Identities=13% Similarity=-0.005 Sum_probs=79.0
Q ss_pred CHHHHHHHHH-HHcCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCChhhHHHHHH
Q 023070 19 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 97 (287)
Q Consensus 19 ~~~~~~~aA~-~~~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~~~~~~~a~ 97 (287)
|.+.+.+-++ .++. +|+|=++- .-|-+..-..+.-.++++.+.+ .+||.+-+.. .+..+++++++
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg~-~~t~~ai~la~ 82 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLVYG----------SNGEGVHLTPEERARGLRALRP--RKPFLVGLME-ETLPQAEGALL 82 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEETC----------TTTTGGGSCHHHHHHHHHTCCC--SSCCEEEECC-SSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh-CCEEEECC----------cCcCchhcCHHHHHHHHHHHHh--CCcEEEeCCC-CCHHHHHHHHH
Confidence 6777877777 5667 89988762 2343444455666778887776 7888887632 45688999999
Q ss_pred HHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhCCCcEE-Ee----cCC-CCHHHHHHHHH
Q 023070 98 MLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKCLE 157 (287)
Q Consensus 98 ~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~~ipVi-~n----GgI-~s~~da~~~l~ 157 (287)
.+++.|+|++-+..-....... ...-+++++.+.+ ++||+ +| .|+ -+++.+.++.+
T Consensus 83 ~A~~~Gadavlv~~P~y~~~~~--~~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La~ 144 (283)
T 2pcq_A 83 EAKAAGAMALLATPPRYYHGSL--GAGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALAP 144 (283)
T ss_dssp HHHHHTCSEEEECCCCTTGGGT--TTHHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHTT
T ss_pred HHHhcCCCEEEecCCcCCCCCC--HHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHhc
Confidence 9999999999775322111000 0122456677776 78875 44 243 47777777654
No 495
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.09 E-value=0.6 Score=44.65 Aligned_cols=71 Identities=18% Similarity=0.260 Sum_probs=54.0
Q ss_pred hhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC-CCcEEEecCCCCHHHHHHHHHhcCccEEEEeh
Q 023070 90 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 168 (287)
Q Consensus 90 ~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~-~ipVi~nGgI~s~~da~~~l~~~gad~VmiGR 168 (287)
.+..+.++.+.++|++.|.+..-... ...-++.++++++.. ++||++ |+|.+.+++..+.+ .|+|+|.+|-
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~------~~~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~~-aGad~i~vg~ 326 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGH------SQGVIDKVKEVRAKYPSLNIIA-GNVATAEATKALIE-AGANVVKVGI 326 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHH-HTCSEEEECS
T ss_pred cchHHHHHHHHhhccceEEecccccc------hhhhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHHH-hCCCEEEECC
Confidence 35567788899999999999743211 123457889998876 478775 78999999999888 5999999854
No 496
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=93.09 E-value=0.23 Score=44.26 Aligned_cols=85 Identities=9% Similarity=0.069 Sum_probs=57.0
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. ++.|+|
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls-~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLT-SSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSC-HHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCC-HHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 455667788889999999999998887643211 112234566666655 58988654444555554433 347999
Q ss_pred EEEEehhhhhC
Q 023070 163 GVLSAESLLEN 173 (287)
Q Consensus 163 ~VmiGR~~l~n 173 (287)
++|+-.+.|..
T Consensus 112 avlv~~P~y~~ 122 (307)
T 3s5o_A 112 AAMVVTPCYYR 122 (307)
T ss_dssp EEEEECCCTTG
T ss_pred EEEEcCCCcCC
Confidence 99999887754
No 497
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=93.06 E-value=0.15 Score=45.18 Aligned_cols=87 Identities=15% Similarity=0.216 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|++.|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.=|=.+.+++.+.. +..|+|
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls-~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESPTLS-KSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSC-HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCC
Confidence 556677889999999999999988877643211 011224455555443 58987543433445554333 447999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
+||+-.+.|..|.
T Consensus 98 avlv~~P~y~~~s 110 (292)
T 2vc6_A 98 GVLIVSPYYNKPT 110 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999999887664
No 498
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.06 E-value=1.6 Score=37.14 Aligned_cols=130 Identities=20% Similarity=0.249 Sum_probs=85.3
Q ss_pred CCCHHHHHHHHH---HH-cCCCCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCcEEEEecCCCCh--h
Q 023070 17 ANDPEILLNAAR---RV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL--Q 90 (287)
Q Consensus 17 g~~~~~~~~aA~---~~-~~g~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~pv~vKiR~g~~~--~ 90 (287)
-++.+++....+ .+ +.|+|+|-+-+.-|. | .=|.+.+.++++... +.+++.-. ..+.. .
T Consensus 69 ~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d--------g---~iD~~~~~~Li~~a~---~~~vTFHR-AFD~~~~~ 133 (224)
T 2bdq_A 69 VYNDLELRIMEEDILRAVELESDALVLGILTSN--------N---HIDTEAIEQLLPATQ---GLPLVFHM-AFDVIPKS 133 (224)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT--------S---SBCHHHHHHHHHHHT---TCCEEECG-GGGGSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCC--------C---CcCHHHHHHHHHHhC---CCeEEEEC-chhccCCc
Confidence 366666665443 33 469999987655332 1 136777888887643 57777653 33222 4
Q ss_pred hHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhh--CCCcEEEecCCCCHHHHHHHHHhcCccEEEE
Q 023070 91 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCEGVLS 166 (287)
Q Consensus 91 ~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~--~~ipVi~nGgI~s~~da~~~l~~~gad~Vmi 166 (287)
+..+..+.+.+.|++.|--||..... +.....+.++++.+. -++-|++.|||+. +.+.++++.+|++-+=.
T Consensus 134 d~~~ale~L~~lGv~rILTSG~~~~~----~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~-~Ni~~l~~~tGv~e~H~ 206 (224)
T 2bdq_A 134 DQKKSIDQLVALGFTRILLHGSSNGE----PIIENIKHIKALVEYANNRIEIMVGGGVTA-ENYQYICQETGVKQAHG 206 (224)
T ss_dssp THHHHHHHHHHTTCCEEEECSCSSCC----CGGGGHHHHHHHHHHHTTSSEEEECSSCCT-TTHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHcCCCEEECCCCCCCC----cHHHHHHHHHHHHHhhCCCeEEEeCCCCCH-HHHHHHHHhhCCCEEcc
Confidence 56667888899999999766654321 113446777777553 2577888899964 88888887789988764
No 499
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.04 E-value=0.26 Score=45.06 Aligned_cols=87 Identities=14% Similarity=0.148 Sum_probs=56.9
Q ss_pred ChhhHHHHHHHHHHcCCCEEEEeccCCCCcCCCCccccHHHHHHHHhhC--CCcEEEecCCCCHHHHHHHH---HhcCcc
Q 023070 88 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 162 (287)
Q Consensus 88 ~~~~~~~~a~~l~~~G~~~I~vh~rt~~~~~~~~~~~~~~~i~~i~~~~--~ipVi~nGgI~s~~da~~~l---~~~gad 162 (287)
|.+....+++.+.+.|+++|.+.|-|.+..... ..-..+.++.+.+.+ ++|||+.=|=.+.+++.+.. ++.|||
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls-~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 156 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMH 156 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC-HHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccChhhCC-HHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 455667888899999999999988877643211 011223455555543 58998754444555555443 346999
Q ss_pred EEEEehhhhhCcc
Q 023070 163 GVLSAESLLENPA 175 (287)
Q Consensus 163 ~VmiGR~~l~nP~ 175 (287)
++|+-...+..|.
T Consensus 157 avlvv~PyY~k~s 169 (360)
T 4dpp_A 157 AALHINPYYGKTS 169 (360)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999988776654
No 500
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=93.04 E-value=3.9 Score=38.01 Aligned_cols=97 Identities=11% Similarity=0.108 Sum_probs=65.6
Q ss_pred EEEEecCCCHHHHHHHHHHHcC-C-CCEEEEeccCChhhhhcCcccccccCChHHHHHHHHHHhhccCCc---EEEEecC
Q 023070 11 LFVQFCANDPEILLNAARRVEP-Y-CDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVP---VSCKIRV 85 (287)
Q Consensus 11 ~~~Qi~g~~~~~~~~aA~~~~~-g-~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~~iv~~v~~~~~~p---v~vKiR~ 85 (287)
-+.+++.++++.+..+.+.+++ + .-.|++..+ .- +.+|++.-.+++.+..++.++.+..++| |.+-.-=
T Consensus 15 av~afn~~n~e~i~Ail~aAee~~sPVIi~~s~~--~v----~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDH 88 (420)
T 2fiq_A 15 GICSVCSAHPLVIEAALAFDRNSTRKVLIEATSN--QV----NQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDH 88 (420)
T ss_dssp CEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETT--TB----STTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEeccCCHHHHHHHHHHHHHcCCCEEEEcChh--hh----hhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCC
Confidence 4678889999988877777765 4 334444422 21 2234544446888999999998888888 8877543
Q ss_pred CCCh-----------hhHHHHHHHHHHcCCCEEEEeccC
Q 023070 86 FPNL-----------QDTIKYAKMLEDAGCSLLAVHGRT 113 (287)
Q Consensus 86 g~~~-----------~~~~~~a~~l~~~G~~~I~vh~rt 113 (287)
|.+. ..+.+.++.+.++|.+.|.+-+-.
T Consensus 89 g~~~~w~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~ 127 (420)
T 2fiq_A 89 LGPNCWQQENVDAAMEKSVELVKAYVRAGFSKIHLDASM 127 (420)
T ss_dssp ESSGGGTTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCccccccchhhhhhhHHHHHHHHHHhCCCEEEECCCC
Confidence 3222 234477888899999999997553
Done!