BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023071
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IZC4|BASS4_ARATH Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Arabidopsis thaliana GN=BASS4 PE=3 SV=1
Length = 436
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/247 (59%), Positives = 179/247 (72%), Gaps = 33/247 (13%)
Query: 45 RSISRPIRACRPSDQ-------DF--------------------------ASSKGLNWAK 71
R ISR IRAC+PSD+ DF AS++ L + K
Sbjct: 40 RWISRSIRACQPSDKVSGQFPFDFMYSSMLIPSSCGEWNRIHLGGDGGISASAQRLYFGK 99
Query: 72 PLLKIAADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGA 131
LL A+DNFLPLAL+ GV GFANP+LGCLADKY +K ST IFI+SGLTLR+ IGA
Sbjct: 100 ELLSFASDNFLPLALVSGVGLGFANPTLGCLADKYSFTKISTCGIFIISGLTLRTEAIGA 159
Query: 132 AAEAWPVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLA 191
A + WP+G+FGL SILL TP FS+LI+ VQLQP+E VTGL +F CMPTTLSSGVALTHLA
Sbjct: 160 AVKGWPLGLFGLISILLLTPSFSRLIMLVQLQPRELVTGLGIFCCMPTTLSSGVALTHLA 219
Query: 192 GGNSALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKV 251
GGN+ALALA+T+ SNLLGI+ +PF +S++IA GVG+S PT QLF+SL++TLLIPLI+GKV
Sbjct: 220 GGNAALALAVTVASNLLGILTIPFWVSRYIAGGVGVSFPTDQLFRSLIVTLLIPLIIGKV 279
Query: 252 LRESITG 258
+RES G
Sbjct: 280 IRESFKG 286
>sp|Q6ESG1|BASS4_ORYSJ Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS4 PE=3 SV=1
Length = 423
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 150/182 (82%)
Query: 77 AADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAW 136
A NFLPLALI G+A +P+LGCLA KY LSK+STF IF++SGLTLR+ E+GAA EAW
Sbjct: 92 ARSNFLPLALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAW 151
Query: 137 PVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSA 196
P G+FGL SILLFTP+ ++ I+Q++ P EF+TGLA+F CMPTTLSSGV LT L GGN+A
Sbjct: 152 PAGLFGLASILLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTA 211
Query: 197 LALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
LALAMT ISNLLGIMIVP S++K+I G G+S+PT++LFKSLV TLLIP+ILGKV RE+
Sbjct: 212 LALAMTAISNLLGIMIVPLSLAKYIGVGAGVSLPTEKLFKSLVTTLLIPIILGKVARETS 271
Query: 257 TG 258
G
Sbjct: 272 KG 273
>sp|B8AJ09|BASS4_ORYSI Probable sodium/metabolite cotransporter BASS4, chloroplastic
OS=Oryza sativa subsp. indica GN=BASS4 PE=3 SV=1
Length = 423
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 150/182 (82%)
Query: 77 AADNFLPLALIGGVAFGFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAW 136
A NFLPLALI G+A +P+LGCLA KY LSK+STF IF++SGLTLR+ E+GAA EAW
Sbjct: 92 ARSNFLPLALIAGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAW 151
Query: 137 PVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSA 196
P G+FGL SILLFTP+ ++ I+Q++ P EF+TGLA+F CMPTTLSSGV LT L GGN+A
Sbjct: 152 PAGLFGLASILLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTA 211
Query: 197 LALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
LALAMT ISNLLGIMIVP S++K+I G G+S+PT++LFKSLV TLLIP+ILGKV RE+
Sbjct: 212 LALAMTAISNLLGIMIVPLSLAKYIGVGAGVSLPTEKLFKSLVTTLLIPIILGKVARETS 271
Query: 257 TG 258
G
Sbjct: 272 KG 273
>sp|Q6DHK8|NTCP7_DANRE Sodium/bile acid cotransporter 7 OS=Danio rerio GN=slc10a7 PE=2
SV=1
Length = 336
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 90 VAFGFANPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFS 145
+ F PS+G L + ++ + IF SGL+L++ E+ +A + F
Sbjct: 20 ITFAKLQPSVGVKGGPLHPEITITYVAVSVIFFNSGLSLKTEELASALMHVKLHFFVQTF 79
Query: 146 ILLFTPYFSKLILQV---QLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMT 202
L+F P L+L+V + + GL +CMP +SS V LT GGN A A+ +
Sbjct: 80 TLVFFPIAIWLLLKVLALTAINEWLLRGLQTVACMPPPVSSAVILTKAVGGNEAAAIFNS 139
Query: 203 IISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESITGECLN 262
+ LGI++ P + F+ G SVP +F L +T+++PLI+G+V R + ECL+
Sbjct: 140 AFGSFLGIVVTPLLLLVFL--GSSSSVPFTSIFSQLFMTVVVPLIVGQVCRRFLR-ECLD 196
>sp|Q7T0V6|NTP7A_XENLA Sodium/bile acid cotransporter 7-A OS=Xenopus laevis GN=slc10a7-a
PE=2 SV=1
Length = 343
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 100 GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ 159
G L + ++ + AIF SGL+L++ E+ A + +F L+F P L LQ
Sbjct: 34 GPLKPEITITYIAVSAIFFNSGLSLKTEELTNALMHVKLHLFVQLFTLVFFPTAIWLFLQ 93
Query: 160 V-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMIVPFS 216
V L P + + GL SCMP +SS V LT GGN A A+ + + LGI++ P
Sbjct: 94 VLSLTPINEWLLKGLQTVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPLL 153
Query: 217 ISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+ G SVP +F L +T+++PLI+G+++R I
Sbjct: 154 LLL--FLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYI 191
>sp|Q52KD1|NTP7B_XENLA Sodium/bile acid cotransporter 7-B OS=Xenopus laevis GN=slc10a7-b
PE=2 SV=1
Length = 343
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 100 GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ 159
G L + ++ + AIF SGL+L++ E+ A + +F L+F P + LQ
Sbjct: 34 GPLKPEITITYIAVSAIFFNSGLSLKTEELTNALMHVKLHLFVQLFTLVFFPTAIWIFLQ 93
Query: 160 V-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMIVPFS 216
V L P + + GL SCMP +SS V LT GGN A A+ + + LGI++ P
Sbjct: 94 VLSLTPINEWLLKGLQTVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPLL 153
Query: 217 ISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+ G SVP +F L +T+++PLI+G+++R I
Sbjct: 154 LLL--FLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYI 191
>sp|Q28HF8|NTCP7_XENTR Sodium/bile acid cotransporter 7 OS=Xenopus tropicalis GN=slc10a7
PE=2 SV=1
Length = 343
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 100 GCLADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ 159
G L + ++ + AIF SGL+L++ E+ A + +F L+F P + LQ
Sbjct: 34 GPLKPEITITYIAVSAIFFNSGLSLKTEELTNALMHVKLHLFVQLFTLVFFPTAIWVFLQ 93
Query: 160 V-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMIVPFS 216
V L P + + GL SCMP +SS V LT GGN A A+ + + LGI++ P
Sbjct: 94 VLSLTPINEWLLKGLQTVSCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPLL 153
Query: 217 ISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+ G SVP +F L +T+++PLI+G+++R I
Sbjct: 154 LLL--FLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYI 191
>sp|Q0GE19|NTCP7_HUMAN Sodium/bile acid cotransporter 7 OS=Homo sapiens GN=SLC10A7 PE=2
SV=1
Length = 358
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 73 LLKIAADNFLPLALIGGVAFGFANPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGE 128
LL+ ++ + ++ +A PS+G L + +S + IF SGL+L++ E
Sbjct: 3 LLERMRKDWFMVGIVLAIAGAKLEPSIGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEE 62
Query: 129 IGAAAEAWPVGIFGLFSILLFTPYFSKLILQV-QLQP--QEFVTGLALFSCMPTTLSSGV 185
+ +A + +F L F P L LQ+ + P + + GL CMP +SS V
Sbjct: 63 LTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAV 122
Query: 186 ALTHLAGGNSALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIP 245
LT GGN A A+ + + LGI+I P + G SVP +F L +T+++P
Sbjct: 123 ILTKAVGGNEAAAIFNSAFGSFLGIVITPLLLLL--FLGSSSSVPFTSIFSQLFMTVVVP 180
Query: 246 LILGKVLRESI 256
LI+G+++R I
Sbjct: 181 LIIGQIVRRYI 191
>sp|Q5PT53|NTCP7_MOUSE Sodium/bile acid cotransporter 7 OS=Mus musculus GN=Slc10a7 PE=2
SV=1
Length = 340
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 73 LLKIAADNFLPLALIGGVAFGFANPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGE 128
LL+ A + + ++ + PS+G L + +S + IF SGL+L++ E
Sbjct: 3 LLERARKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEE 62
Query: 129 IGAAAEAWPVGIFGLFSILLFTPYFSKLILQ---VQLQPQEFVTGLALFSCMPTTLSSGV 185
+ +A + +F L F P L LQ V + + GL CMP +SS V
Sbjct: 63 LTSALVHLRLHLFIQIFTLAFFPAAIWLFLQLLSVTSINEWLLKGLQTVGCMPPPVSSAV 122
Query: 186 ALTHLAGGNSALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIP 245
LT GGN A A+ + + LGI++ P + + G SVP +F L +T+++P
Sbjct: 123 ILTKAVGGNEAAAIFNSAFGSFLGIVVTP--VLLLLFLGSSSSVPFTSIFSQLFMTVVVP 180
Query: 246 LILGKVLRESI 256
L++G+++R I
Sbjct: 181 LVIGQIVRRYI 191
>sp|Q5PT50|NTCP7_RAT Sodium/bile acid cotransporter 7 OS=Rattus norvegicus GN=Slc10a7
PE=2 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 90 VAFGFA--NPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPVGIFGL 143
VA G A PS+G L + +S + IF SGL+L++ E+ +A + +F
Sbjct: 18 VAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQ 77
Query: 144 FSILLFTPYFSKLILQ---VQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALA 200
L F P L LQ V + + GL CMP +SS V LT GGN A A+
Sbjct: 78 VFTLAFFPTTIWLFLQLLSVTSINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIF 137
Query: 201 MTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+ + LGI++ P + + G SVP +F L +T+++PL++G+++R I
Sbjct: 138 NSAFGSFLGIVVTP--VLLLLFLGSSSSVPFTSIFSQLFMTVVVPLVIGQIVRRYI 191
>sp|Q5ZJH8|NTCP7_CHICK Sodium/bile acid cotransporter 7 OS=Gallus gallus GN=SLC10A7 PE=2
SV=1
Length = 333
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 87 IGGVAFGFA----NPSLGC----LADKYQLSKFSTFAIFIVSGLTLRSGEIGAAAEAWPV 138
I G+A A P++G L + ++ + AIF SGL+L++ E+ +A +
Sbjct: 13 IAGIALVIAAARLEPAVGVKGGPLKPEITITYIAVSAIFFNSGLSLKTEELTSALMHVKL 72
Query: 139 GIFGLFSILLFTPYFSKLILQV-QLQP--QEFVTGLALFSCMPTTLSSGVALTHLAGGNS 195
+F L+F P L LQ+ + P + + GL CMP +SS V LT GGN
Sbjct: 73 HLFVQIFTLVFFPTAIWLFLQLLSITPINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNE 132
Query: 196 ALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRES 255
A A I N S G SVP +F L +T+++PLI+G+++R
Sbjct: 133 AAA-----IFN---------SAFGSFLLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRY 178
Query: 256 I 256
I
Sbjct: 179 I 179
>sp|Q05131|YMS4_YEAST Uncharacterized membrane protein YMR034C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR034C PE=1
SV=1
Length = 434
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 170 GLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMIVPFSISKFI-------- 221
GL L + PTT++S V +T AGGNS L + I NLLG I P + F
Sbjct: 123 GLILTATCPTTVASNVIMTTNAGGNSLLCVCEVFIGNLLGAFITPALVQMFTNRAPFAYG 182
Query: 222 --AAGVGISVPTKQLFKSLVLTLLIPLILGKVLRE 254
A G GI ++ K + L++ +PL +G+V++
Sbjct: 183 NPATGNGIGALYGRVMKQVGLSVFVPLFVGQVIQN 217
>sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter YocS OS=Bacillus
subtilis (strain 168) GN=yocS PE=3 SV=1
Length = 321
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 93 GFANPSLGCLADKYQLSKFSTFAIFIVSGLTLRSGEIGA-AAEAWPV--GIFGLFSILLF 149
GF+ PSL Y ++ F +F + GLTL++ + + W V G+ ++I+
Sbjct: 26 GFSFPSLFTWISSY-ITIFLGIIMFGM-GLTLQADDFKELVRKPWQVIIGVIAQYTIMPL 83
Query: 150 TPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLG 209
+ L + P E G+ L C P +S V +T LA GN+AL++A+T IS LL
Sbjct: 84 VAFGLAFGLHL---PAEIAVGVILVGCCPGGTASNV-MTFLAKGNTALSVAVTTISTLLA 139
Query: 210 IMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLR 253
++ P I F A + V LF S++ +L P+I G +++
Sbjct: 140 PVVTPLLIMLF--AKEWLPVSPGSLFISILQAVLFPIIAGLIVK 181
>sp|Q1EBV7|BASS2_ARATH Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis
thaliana GN=BASS2 PE=2 SV=1
Length = 409
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 136 WPVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNS 195
W VG+ G + + P LI TGL L SC P +S VA T+++ GN
Sbjct: 159 WTVGV-GFLAQYMIKPILGFLIAMTLKLSAPLATGLILVSCCPGGQASNVA-TYISKGNV 216
Query: 196 ALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRE 254
AL++ MT S + I++ P ++K + AG + V L S +L+P I+G + E
Sbjct: 217 ALSVLMTTCSTIGAIIMTPL-LTKLL-AGQLVPVDAAGLALSTFQVVLVPTIIGVLANE 273
>sp|Q5VRB2|BASS2_ORYSJ Probable sodium/metabolite cotransporter BASS2, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS2 PE=2 SV=1
Length = 419
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 136 WPVGIFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNS 195
W VG+ G + L P I TGL L SC P +S VA T+++ GN
Sbjct: 168 WTVGV-GFLAQYLIKPMLGFAIAMTLKLSAPLATGLILVSCCPGGQASNVA-TYISKGNV 225
Query: 196 ALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRE 254
AL++ MT S + I++ P ++K + AG + V L S +L+P I+G + E
Sbjct: 226 ALSVLMTTCSTIGAIVMTPL-LTKLL-AGQLVPVDAAGLAISTFQVVLLPTIVGVLAHE 282
>sp|P39879|Y2026_PSEAE Uncharacterized protein PA2026 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2026
PE=4 SV=2
Length = 333
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 79 DNFLPLALIGGVAFGFANPSLGCLADKYQ-LSKFSTFAIFIVSGLTLRSGEIGAAAEAWP 137
DNF LALI V P G A ++ ++ +F + G L I A W
Sbjct: 9 DNF-TLALIATVLLATFLPCSGQTAVVFEWVTNIGIGLLFFLHGAKLSRQAIIAGMTHWR 67
Query: 138 VGIFGLFSILLFTPYFSKLILQVQLQPQ---EFVTGLALFSCMPTTLSSGVALTHLAGGN 194
+ + + P L L+ L P E G+ +P T+ S +A T LA GN
Sbjct: 68 LHLLVFACTFVMFPLLG-LALKPALSPMVTPELYLGILFLCALPATVQSSIAFTSLARGN 126
Query: 195 SALALAMTIISNLLGIMIVPFSISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRE 254
A+ +S+LLG+ + P + + A G + + L LL+P I G+VLR
Sbjct: 127 VPAAVCSASVSSLLGVFLTPLLVKLLLGAE-GETGNALDAIGKITLQLLVPFIAGQVLRR 185
Query: 255 SI 256
I
Sbjct: 186 WI 187
>sp|P39836|YFEH_ECOLI Uncharacterized protein YfeH OS=Escherichia coli (strain K12)
GN=yfeH PE=4 SV=2
Length = 332
Score = 38.9 bits (89), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 116 IFIVSGLTLRSGEIGAAAEAWPVGIFGLFSILLFTPYFSKLILQ---VQLQPQEFVTGLA 172
+F + G L I A W + ++ + S + P L V + P + +G
Sbjct: 45 LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLY-SGFL 103
Query: 173 LFSCMPTTLSSGVALTHLAGGNSALALAMTIISNLLGIMIVPFSISKFI-AAGVGISVPT 231
+P T+ S +A T +AGGN A A+ S+LLGI + P + + G G S+
Sbjct: 104 YLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSL-- 161
Query: 232 KQLFKSLVLTLLIPLILGKVLRESI 256
+Q+ K ++L LL+P +LG + R I
Sbjct: 162 EQVGK-IMLQLLLPFVLGHLSRPWI 185
>sp|Q0V8N6|P3_BOVIN P3 protein OS=Bos taurus GN=SLC10A3 PE=2 SV=1
Length = 477
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 140 IFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALAL 199
+ GL L P+++ L+ +V + P+ GL + +C + L GG+ LA+
Sbjct: 227 LLGLLGQFLVMPFYAFLMAKVFMLPKALALGL-IITCSSPGGGGSYLFSLLLGGDVTLAI 285
Query: 200 AMTIISNLLGIMIVPFS---ISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+MT IS + +P S S+ ++ + VP ++ +L L + IP+ G V++ +
Sbjct: 286 SMTFISTVAATGFLPLSSAIYSRLLSIHETLHVPVSKILGTL-LFIAIPIAAGVVIKSKL 344
>sp|P21129|P3_MOUSE P3 protein OS=Mus musculus GN=Slc10a3 PE=2 SV=2
Length = 473
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 140 IFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALAL 199
+ GL L P+++ L+ +V + P+ GL + +C + L GG+ LA+
Sbjct: 223 LLGLLGQFLVMPFYAFLMAKVFMLPKALALGL-IITCSSPGGGGSYLFSLLLGGDVTLAI 281
Query: 200 AMTIISNLLGIMIVPFS---ISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+MT IS + +P S S ++ + VP ++ +L L + IP+ G V++ +
Sbjct: 282 SMTFISTVAATGFLPLSSAIYSYLLSIHETLHVPISKILGTL-LFIAIPIAAGVVIKSKL 340
Query: 257 T--GECLNIFIRP 267
E L I+P
Sbjct: 341 PKFSELLLQVIKP 353
>sp|P09131|P3_HUMAN P3 protein OS=Homo sapiens GN=SLC10A3 PE=2 SV=1
Length = 477
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 140 IFGLFSILLFTPYFSKLILQVQLQPQEFVTGLALFSCMPTTLSSGVALTHLAGGNSALAL 199
+ GL L P ++ L+ +V + P+ GL + +C + L GG+ LA+
Sbjct: 227 LLGLLGQFLVMPLYAFLMAKVFMLPKALALGL-IITCSSPGGGGSYLFSLLLGGDVTLAI 285
Query: 200 AMTIISNLLGIMIVPFS---ISKFIAAGVGISVPTKQLFKSLVLTLLIPLILGKVLRESI 256
+MT +S + +P S S+ ++ + VP ++ +L L + IP+ +G +++ +
Sbjct: 286 SMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTL-LFIAIPIAVGVLIKSKL 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,954,254
Number of Sequences: 539616
Number of extensions: 3783010
Number of successful extensions: 10839
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 10805
Number of HSP's gapped (non-prelim): 37
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)