BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023072
MGFQVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVW
SKGYKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFH
DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLK
ALAEEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSKHFASTSLNLKKNME
EASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTPMSKQG

High Scoring Gene Products

Symbol, full name Information P value
DGD2
digalactosyl diacylglycerol deficient 2
protein from Arabidopsis thaliana 1.9e-99
DGD1
DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1
protein from Arabidopsis thaliana 2.0e-65

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023072
        (287 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2126998 - symbol:DGD2 "digalactosyl diacylglyc...   987  1.9e-99   1
TAIR|locus:2098333 - symbol:DGD1 "DIGALACTOSYL DIACYLGLYC...   666  2.0e-65   1


>TAIR|locus:2126998 [details] [associations]
            symbol:DGD2 "digalactosyl diacylglycerol deficient 2"
            species:3702 "Arabidopsis thaliana" [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0016757 "transferase activity, transferring glycosyl groups"
            evidence=ISS] [GO:0016036 "cellular response to phosphate
            starvation" evidence=IEP;RCA;IMP] [GO:0008194
            "UDP-glycosyltransferase activity" evidence=IDA] [GO:0009247
            "glycolipid biosynthetic process" evidence=IDA] [GO:0019375
            "galactolipid biosynthetic process" evidence=RCA;IDA] [GO:0046481
            "digalactosyldiacylglycerol synthase activity" evidence=IDA]
            [GO:0009707 "chloroplast outer membrane" evidence=IDA] [GO:0035250
            "UDP-galactosyltransferase activity" evidence=TAS] [GO:0000165
            "MAPK cascade" evidence=RCA] [GO:0001666 "response to hypoxia"
            evidence=RCA] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
            [GO:0009409 "response to cold" evidence=RCA] [GO:0009697 "salicylic
            acid biosynthetic process" evidence=RCA] [GO:0009738 "abscisic acid
            mediated signaling pathway" evidence=RCA] [GO:0009862 "systemic
            acquired resistance, salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
            signaling pathway" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0042631 "cellular response to water deprivation" evidence=RCA]
            [GO:0043069 "negative regulation of programmed cell death"
            evidence=RCA] [GO:0045087 "innate immune response" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA]
            InterPro:IPR001296 Pfam:PF00534 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009247 EMBL:AF058919 EMBL:AL161472
            GO:GO:0035250 GO:GO:0016036 CAZy:GT4 GO:GO:0009707
            HOGENOM:HOG000239858 KO:K09480 GO:GO:0046481 EMBL:AF421193
            EMBL:AF421194 EMBL:AK228220 EMBL:AK220856 EMBL:BT010144
            IPI:IPI00530882 IPI:IPI00798645 PIR:T01219 RefSeq:NP_191964.2
            UniGene:At.43438 PDB:2L7C PDBsum:2L7C ProteinModelPortal:Q8W1S1
            IntAct:Q8W1S1 STRING:Q8W1S1 PaxDb:Q8W1S1 PRIDE:Q8W1S1
            EnsemblPlants:AT4G00550.1 GeneID:827960 KEGG:ath:AT4G00550
            TAIR:At4g00550 eggNOG:NOG299328 InParanoid:Q8W1S1 OMA:TKGAYYI
            PhylomeDB:Q8W1S1 ProtClustDB:PLN02846
            BioCyc:MetaCyc:AT4G00550-MONOMER Genevestigator:Q8W1S1
            GermOnline:AT4G00550 Uniprot:Q8W1S1
        Length = 473

 Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
 Identities = 188/276 (68%), Positives = 218/276 (78%)

Query:     4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
             +VIRLSAATQEY  SI+CNVHGVNPKFLEIG +K EQQ+     F KGAYYIGKMVWSKG
Sbjct:   185 KVIRLSAATQEYPKSIVCNVHGVNPKFLEIGLRKLEQQKLQEQPFTKGAYYIGKMVWSKG 244

Query:    64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
             YKELL+LL+ HQKELA LEVDLYG+GED  +I+EAA KL + V VYPGRDHAD +FH+YK
Sbjct:   245 YKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLFHNYK 304

Query:   124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXX 183
             VFLNPSTTDVVCTTTAEALAMGKIVVCANH SN FFKQFPNCRTYDD  GFV        
Sbjct:   305 VFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATLKALG 364

Query:   184 XXXXXXXXXQRHQLSWESATERFLQVAELDQAVVXXXXXXXXXHFASTSLNLKKNMEEAS 243
                      QRH+LSWE+AT+RF++V++L++             FAS+S+++ KN+E+ S
Sbjct:   365 EQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNLEDMS 424

Query:   244 AYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 279
             AY+HFLASGFE SR AFGAIPGSL PDEELC++LGL
Sbjct:   425 AYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460


>TAIR|locus:2098333 [details] [associations]
            symbol:DGD1 "DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1"
            species:3702 "Arabidopsis thaliana" [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0016757 "transferase activity, transferring glycosyl groups"
            evidence=ISS;IMP] [GO:0006869 "lipid transport" evidence=TAS]
            [GO:0019375 "galactolipid biosynthetic process" evidence=RCA;IDA]
            [GO:0046480 "galactolipid galactosyltransferase activity"
            evidence=IDA] [GO:0009707 "chloroplast outer membrane"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0035250
            "UDP-galactosyltransferase activity" evidence=TAS] [GO:0042550
            "photosystem I stabilization" evidence=TAS] [GO:0001666 "response
            to hypoxia" evidence=RCA] [GO:0006636 "unsaturated fatty acid
            biosynthetic process" evidence=RCA] [GO:0006655
            "phosphatidylglycerol biosynthetic process" evidence=RCA]
            [GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
            [GO:0016036 "cellular response to phosphate starvation"
            evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
            evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
            process, mevalonate-independent pathway" evidence=RCA]
            GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0035250
            CAZy:GT4 EMBL:AC009918 GO:GO:0009707 EMBL:AF149842 EMBL:AF149841
            EMBL:AY101521 EMBL:AY075649 IPI:IPI00521446 IPI:IPI00543822
            RefSeq:NP_187773.1 RefSeq:NP_850561.1 UniGene:At.21419
            ProteinModelPortal:Q9S7D1 STRING:Q9S7D1 PRIDE:Q9S7D1
            EnsemblPlants:AT3G11670.1 GeneID:820339 KEGG:ath:AT3G11670
            TAIR:At3g11670 eggNOG:NOG284572 HOGENOM:HOG000239858
            InParanoid:Q9S7D1 KO:K09480 OMA:TQRFMEY PhylomeDB:Q9S7D1
            ProtClustDB:CLSN2918066 BioCyc:MetaCyc:AT3G11670-MONOMER
            BRENDA:2.4.1.241 Genevestigator:Q9S7D1 GermOnline:AT3G11670
            GO:GO:0046481 GO:GO:0019375 GO:GO:0042550 Uniprot:Q9S7D1
        Length = 808

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 126/279 (45%), Positives = 180/279 (64%)

Query:     4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
             +V+RLSAATQ+   S++CNVHGVNPKFL IG+K  E++  G  AF+KGAY++GKMVW+KG
Sbjct:   522 KVLRLSAATQDLPKSVVCNVHGVNPKFLMIGEKIAEERSRGEQAFSKGAYFLGKMVWAKG 581

Query:    64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
             Y+EL++L+  H+ EL    +D+YGNGED  ++Q AA+K  + +    GRDHAD   H YK
Sbjct:   582 YRELIDLMAKHKSELGSFNLDVYGNGEDAVEVQRAAKKHDLNLNFLKGRDHADDALHKYK 641

Query:   124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVXXXXXXXX 183
             VF+NPS +DV+CT TAEALAMGK VVCA+HPSN+FF+ FPNC TY     FV        
Sbjct:   642 VFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMT 701

Query:   184 XXXXXXXXXQRHQLSWESATERFLQVAELDQAVVXXXXXXXXXHFASTSLNLKKNMEEAS 243
                      Q + LSWE+AT+RF++ ++LD+ ++           + +  +  + ++   
Sbjct:   702 KEPLPLTPEQMYNLSWEAATQRFMEYSDLDK-ILNNGEGGRKMRKSRSVPSFNEVVDGGL 760

Query:   244 AYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 282
             A+ H++ +G +  R   GA P +   D + CK+L LV P
Sbjct:   761 AFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPP 799


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      287       261   0.00090  114 3  11 22  0.47    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  205 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.12u 0.20s 21.32t   Elapsed:  00:00:01
  Total cpu time:  21.12u 0.20s 21.32t   Elapsed:  00:00:01
  Start:  Sat May 11 09:34:35 2013   End:  Sat May 11 09:34:36 2013

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