BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023072
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DW75|DGDG2_SOYBN Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max
GN=DGD2 PE=2 SV=1
Length = 463
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/282 (73%), Positives = 247/282 (87%), Gaps = 1/282 (0%)
Query: 4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
+VIRLSAATQ+Y SIICNVHGVNPKFLEIGKKK+EQQQ G HAF KGAY+IGKM+WSKG
Sbjct: 183 KVIRLSAATQDYTGSIICNVHGVNPKFLEIGKKKREQQQKGEHAFTKGAYFIGKMIWSKG 242
Query: 64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
YKELL+LL DH+KEL+ LEVDL+G+GED +++Q+AAEKL++ VRV+P RDHAD +FHDYK
Sbjct: 243 YKELLQLLKDHEKELSALEVDLFGSGEDSDEVQKAAEKLELAVRVHPARDHADALFHDYK 302
Query: 124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLKALA 183
+FLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNC TYDD +GFV+ TLKALA
Sbjct: 303 LFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDGFVKLTLKALA 362
Query: 184 EEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSKHFASTSLNLKKNMEEAS 243
E+PA PT+AQRH LSWE+AT+RFL+ A+LD+ + +K S++ S +F + SLNL++ ++EAS
Sbjct: 363 EQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLERKLSRTTS-NFLAASLNLQEKVDEAS 421
Query: 244 AYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTPMSK 285
AYVH +ASGFE SRR FGAIP SL PDEEL KELGL +K
Sbjct: 422 AYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLTDASTK 463
>sp|Q6DW73|DGDG2_LOTJA Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus
japonicus GN=DGD2 PE=2 SV=1
Length = 463
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/276 (73%), Positives = 240/276 (86%), Gaps = 1/276 (0%)
Query: 4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
+VIRLSAATQ+Y+ SI+CNVHGVNPKFLEIGKKK+EQQQNG AF KGAY+IGKMVWSKG
Sbjct: 183 KVIRLSAATQDYSGSIVCNVHGVNPKFLEIGKKKREQQQNGDQAFTKGAYFIGKMVWSKG 242
Query: 64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
YKELL L +HQKEL+ LEVDL+G+GED +++Q+AA+KL++ VRV+P RDHAD +FHDYK
Sbjct: 243 YKELLHLFKNHQKELSALEVDLFGSGEDSDEVQKAAKKLEMAVRVHPARDHADALFHDYK 302
Query: 124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLKALA 183
+FLNPSTTDVVCTTTAEALAMGKIVVCANH SN+FFKQFPNC T+D+ GFV+ LKALA
Sbjct: 303 LFLNPSTTDVVCTTTAEALAMGKIVVCANHCSNEFFKQFPNCWTFDESKGFVQLILKALA 362
Query: 184 EEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSKHFASTSLNLKKNMEEAS 243
EEPA T+AQRH LSWE+ATERFL+ AELD+ KK S+S S + STSLNL++ +++AS
Sbjct: 363 EEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSI-YMSTSLNLQQTVDDAS 421
Query: 244 AYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 279
AYVH +ASGFE SRR FGAIPGSL PDEEL KELGL
Sbjct: 422 AYVHHVASGFEISRRMFGAIPGSLKPDEELSKELGL 457
>sp|Q8W1S1|DGDG2_ARATH Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=DGD2 PE=1 SV=1
Length = 473
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/276 (72%), Positives = 232/276 (84%)
Query: 4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
+VIRLSAATQEY SI+CNVHGVNPKFLEIG +K EQQ+ F KGAYYIGKMVWSKG
Sbjct: 185 KVIRLSAATQEYPKSIVCNVHGVNPKFLEIGLRKLEQQKLQEQPFTKGAYYIGKMVWSKG 244
Query: 64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
YKELL+LL+ HQKELA LEVDLYG+GED +I+EAA KL + V VYPGRDHAD +FH+YK
Sbjct: 245 YKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLFHNYK 304
Query: 124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLKALA 183
VFLNPSTTDVVCTTTAEALAMGKIVVCANH SN FFKQFPNCRTYDD GFV ATLKAL
Sbjct: 305 VFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATLKALG 364
Query: 184 EEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSKHFASTSLNLKKNMEEAS 243
E+P+ TE QRH+LSWE+AT+RF++V++L++ + S FAS+S+++ KN+E+ S
Sbjct: 365 EQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNLEDMS 424
Query: 244 AYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 279
AY+HFLASGFE SR AFGAIPGSL PDEELC++LGL
Sbjct: 425 AYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460
>sp|Q6DW74|DGDG1_LOTJA Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus
japonicus GN=DGD1 PE=2 SV=1
Length = 786
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/286 (49%), Positives = 198/286 (69%), Gaps = 7/286 (2%)
Query: 4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
+V+RLSAATQ+ S++CNVHGVNPKFL+IG+ +++ G F KGAY++GKMVW+KG
Sbjct: 492 KVLRLSAATQDLPKSVVCNVHGVNPKFLKIGESIAAERELGQKGFTKGAYFLGKMVWAKG 551
Query: 64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
YKEL++LL H+ +L G+++D++GNGED N++Q AA + + + GRDHAD H YK
Sbjct: 552 YKELIDLLAKHKADLDGVKLDVFGNGEDANEVQSAARRFDLNLNFQKGRDHADDSLHRYK 611
Query: 124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLKALA 183
VF+NPS +DV+CT TAEALAMGK VVCA+HPSN+FF+ FPNC TY F +ALA
Sbjct: 612 VFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTPEDFAVKVKEALA 671
Query: 184 EEPALPTEAQRHQLSWESATERFLQVAELDQAVVK-----KPSKSPSKHFASTSL--NLK 236
EP T QR+QLSWE+AT+RF++ +ELD+ + K KPSK+ K A ++ NL
Sbjct: 672 NEPYPLTPEQRYQLSWEAATQRFMEYSELDKVLNKEKDGAKPSKNNRKIMAKSASMPNLT 731
Query: 237 KNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 282
+ ++ A+ H+ +G E R GA PG+ D++ CK+L L+ P
Sbjct: 732 ELVDGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDLNLLPP 777
>sp|Q6DW76|DGDG1_SOYBN Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max
GN=DGD1 PE=2 SV=1
Length = 783
Score = 291 bits (745), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/286 (49%), Positives = 198/286 (69%), Gaps = 7/286 (2%)
Query: 4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
+V+RLSAATQ+ S+ICNVHGVNPKFL+IG+K +++ G AF KGAY++GKMVW+KG
Sbjct: 489 KVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAERELGQKAFTKGAYFLGKMVWAKG 548
Query: 64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
YKEL++LL H+ +L G ++D++GNGED N++Q AA +L + + GRDHAD H YK
Sbjct: 549 YKELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARRLDLNLNFQKGRDHADDSLHRYK 608
Query: 124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLKALA 183
VF+NPS +DV+CT TAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +AL
Sbjct: 609 VFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVTKVKEALE 668
Query: 184 EEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSK-------HFASTSLNLK 236
EP T QR+QLSWE+AT+RF++ +ELD + K+ + S+ +++ NL
Sbjct: 669 NEPYPLTPEQRYQLSWEAATQRFMEYSELDGILNKENNGEKSRVDKGKLIAKSASMPNLT 728
Query: 237 KNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 282
+ ++ A+ H+ +G E R GAIPG+ D++ CK+L L+ P
Sbjct: 729 ELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPP 774
>sp|Q9S7D1|DGDG1_ARATH Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis
thaliana GN=DGD1 PE=1 SV=1
Length = 808
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 189/280 (67%), Gaps = 3/280 (1%)
Query: 4 QVIRLSAATQEYANSIICNVHGVNPKFLEIGKKKKEQQQNGTHAFAKGAYYIGKMVWSKG 63
+V+RLSAATQ+ S++CNVHGVNPKFL IG+K E++ G AF+KGAY++GKMVW+KG
Sbjct: 522 KVLRLSAATQDLPKSVVCNVHGVNPKFLMIGEKIAEERSRGEQAFSKGAYFLGKMVWAKG 581
Query: 64 YKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYK 123
Y+EL++L+ H+ EL +D+YGNGED ++Q AA+K + + GRDHAD H YK
Sbjct: 582 YRELIDLMAKHKSELGSFNLDVYGNGEDAVEVQRAAKKHDLNLNFLKGRDHADDALHKYK 641
Query: 124 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDDRNGFVEATLKALA 183
VF+NPS +DV+CT TAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +A+
Sbjct: 642 VFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMT 701
Query: 184 EEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSKHFASTSL-NLKKNMEEA 242
+EP T Q + LSWE+AT+RF++ ++LD+ + + K S S+ + + ++
Sbjct: 702 KEPLPLTPEQMYNLSWEAATQRFMEYSDLDK--ILNNGEGGRKMRKSRSVPSFNEVVDGG 759
Query: 243 SAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 282
A+ H++ +G + R GA P + D + CK+L LV P
Sbjct: 760 LAFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPP 799
>sp|A1C3L9|GTF1_STRPA Glycosyltransferase Gtf1 OS=Streptococcus parasanguis GN=gtf1 PE=1
SV=1
Length = 504
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 67 LLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRV-YPGRDHADLIFHDYKVF 125
L+E + QK L L D+YG G + ++ E KL + G D I+ +Y+++
Sbjct: 339 LIEGVALAQKRLPELTFDIYGEGGERRKLTELLTKLHAGEFIELKGHKQLDEIYQNYELY 398
Query: 126 LNPSTTDVVCTTTAEALAMGKIVVCANHP 154
L ST++ T EA+ G ++ + P
Sbjct: 399 LTASTSEGFGLTLMEAVGSGLPIIGFDVP 427
>sp|O95996|APC2_HUMAN Adenomatous polyposis coli protein 2 OS=Homo sapiens GN=APC2 PE=1
SV=1
Length = 2303
Score = 35.8 bits (81), Expect = 0.35, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 182 LAEEPALPTEAQRHQLSWESATERFLQVA----------ELDQAVVKKPSKSPSKHFAST 231
LA P P EA + L WES +RFL +A ELD V+ + P ++F+
Sbjct: 1216 LAPAPQGPPEATQFSLQWESYVKRFLDIADCRERCRLPSELDAGSVRFTVEKPDENFSCA 1275
Query: 232 S 232
S
Sbjct: 1276 S 1276
>sp|Q3S2Y2|GTF1_STRAG Glycosyltransferase Gtf1 OS=Streptococcus agalactiae GN=gtf1 PE=1
SV=1
Length = 506
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 67 LLELLDDHQKELAGLEVDLYGNGEDFNQIQE--AAEKLKIVVRVYPGRDHADLIFHDYKV 124
L+ + + K + L D+YG G + ++QE A K +R+ G + ++ DY+V
Sbjct: 338 LINAVVEANKVIPELTFDIYGEGGERQKLQEIIAKNKANNYIRL-MGHKNLSSVYKDYQV 396
Query: 125 FLNPSTTDVVCTTTAEALAMGKIVVCANHP 154
+L+ ST++ T EA+ G ++ + P
Sbjct: 397 YLSGSTSEGFGLTLMEAIGSGLPIIGLDVP 426
>sp|Q53JI9|SPSA5_ORYSJ Probable sucrose-phosphate synthase 5 OS=Oryza sativa subsp.
japonica GN=SPS5 PE=2 SV=1
Length = 1014
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 74 HQKELAGLEVDLYGNGEDFNQIQEAAEK-----LKIVVR-------VYPGRDHADLIFHD 121
H +ELA L + + GN +D ++ A LK++ R YP + H
Sbjct: 475 HLRELANLTL-ILGNRDDIEEMSGGAATVLTAVLKLIDRYDLYGQVAYPKHHKQTDVPHI 533
Query: 122 YK-------VFLNPSTTDVVCTTTAEALAMG-KIVVCANHPSNDFFKQFPNCRTYDDRN- 172
Y+ VF+NP+ + T EA A G +V N D K N D +
Sbjct: 534 YRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKVLSNGLLVDPHDA 593
Query: 173 GFVEATLKALAEEPALPTEAQR------HQLSWESATERFL 207
+ A L +L + + +E +R H+ SW +L
Sbjct: 594 AAITAALLSLLADKSRWSECRRSGLRNIHRFSWPHHCRLYL 634
>sp|B1JDX9|Y4806_PSEPW UPF0229 protein PputW619_4806 OS=Pseudomonas putida (strain W619)
GN=PputW619_4806 PE=3 SV=1
Length = 423
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 70 LLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRDHADLIFHDYKVFLNPS 129
LL + QKELA L+V+ N D ++++ E+LK + P D DL ++ NPS
Sbjct: 185 LLREAQKELARLKVEEPDNFTDIQEVEQEIERLKARINRLPFLDTFDLKYNLLVKQPNPS 244
Query: 130 TTDVV 134
+ V+
Sbjct: 245 SKAVM 249
>sp|P70194|CLC4F_MOUSE C-type lectin domain family 4 member F OS=Mus musculus GN=Clec4f
PE=1 SV=1
Length = 548
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 169 DDRNGFVEATLKALAEEPALPTEAQRHQLSWESATERFLQVAELDQAVVKKPSKSPSKHF 228
+D N + T L E AL E Q A L+VA D ++ + +
Sbjct: 145 EDVNADILQTKDVLKESGALALETQ--------ALRSSLEVASADIHSLRGDLEKANAMT 196
Query: 229 ASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKE 276
+ T LK + E SA +H L G E ++ A+ GSL +L +
Sbjct: 197 SQTRGLLKSSTENTSAELHVLGRGLEEAQSEIQALRGSLQSANDLSSQ 244
>sp|Q9ZBH5|DCDA_STRCO Diaminopimelate decarboxylase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=lysA PE=3 SV=1
Length = 440
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 59 VWSKGYKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPGRD 113
+W + +E L L+D H +L GL + + G+G D+ ++ E + VR+ GRD
Sbjct: 173 IWHEHLEESLALVDRHGLDLVGLHMHI-GSGVDYGHLESVCETMVKQVRMA-GRD 225
>sp|O32272|TUAC_BACSU Putative teichuronic acid biosynthesis glycosyltransferase TuaC
OS=Bacillus subtilis (strain 168) GN=tuaC PE=2 SV=1
Length = 389
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 52 AYYIGKMVWSKGYKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRVYPG 111
A Y+G++V KG EL E ++ Q + V G+G + + +K IV P
Sbjct: 222 AVYVGRLVREKGIFELSEAIESLQDSPKAVFV---GDGPAKSTL---TQKGHIVTGQVPN 275
Query: 112 RDHADLIFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCAN 152
D + +F+ PS ++ + T EALA+ V+C +
Sbjct: 276 HQVRDYLL-AADLFVLPSYSEGMPTVVIEALALRVPVICTD 315
>sp|O05083|Y1698_HAEIN Uncharacterized glycosyltransferase HI_1698 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1698 PE=3 SV=1
Length = 353
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 55 IGKMVWSKGYKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKI--VVRVYPGR 112
+G + KG+ LL++ K+ + + G+GE+ ++ A+ L I V P
Sbjct: 187 VGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSVNFIPRT 246
Query: 113 DHADLIFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCAN 152
+ + ++ PS T+ + EA+A G +V N
Sbjct: 247 NDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFN 286
>sp|Q1Q999|MNMC_PSYCK tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Psychrobacter cryohalolentis (strain K5)
GN=mnmC PE=3 SV=1
Length = 697
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 100 EKLKIVVRVYPGRDHADLIFHDYK-----VFLNPSTTDVVCTTTAEALAMGKIVVCANHP 154
+ L+ V+ +P + L + K + L S D + + + +V+CA +
Sbjct: 443 QALQTVILAHPNITYQQLNIINIKETENSIILTGSKEDENASQASLTITADHVVICAAYE 502
Query: 155 SNDFFKQFPNCRTYDDRNGFVEATLKALAEEPALP 189
S+ K+ CRT + + T + L + P LP
Sbjct: 503 SHQLDKRIVKCRTIRGQLSWFTPTAQQLTQLPKLP 537
>sp|Q9AET5|GTF1_STRGN Glycosyltransferase Gtf1 OS=Streptococcus gordonii GN=gtf1 PE=3
SV=2
Length = 506
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 77 ELAGLEVDLYGNGEDFNQIQEAAEK--LKIVVRVYPGRDHADL--IFHDYKVFLNPSTTD 132
+L L +D+YG G + ++++ E+ + +R+ + HADL I+ Y+++L ST++
Sbjct: 348 QLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRL---KGHADLSQIYAGYELYLTASTSE 404
Query: 133 VVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCRTYDD-RNGFV 175
T EA+ G P F ++ N DD +NG++
Sbjct: 405 GFGLTLMEAVGSGL-------PLIGFDVRYGNQTFIDDGKNGYL 441
>sp|P27127|RFAB_ECOLI Lipopolysaccharide 1,6-galactosyltransferase OS=Escherichia coli
(strain K12) GN=rfaB PE=3 SV=2
Length = 359
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 54 YIGKMVWSKGYKELLELLDDHQKELAGLEVDLYGNGEDFNQIQEAAEKLKIVVRV----- 108
Y+G+M + +G K + +LLD + ++ + G+G DF + Q +L I R+
Sbjct: 183 YVGRMKF-EGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGW 241
Query: 109 --YPGRDHADLIFHDYK---VFLNPSTTDVVCTTTAEALAMGKIVV---CANHPSNDFFK 160
YP +L+ D + L S+ + T EAL+ G + C + P+ D +
Sbjct: 242 QQYP----WELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPA-DIIQ 296
Query: 161 QFPNCRTYD--DRNGFVEATLKALAEE 185
N Y D GFV K +A E
Sbjct: 297 PDVNGHLYQPGDIAGFVTLLNKYIAGE 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,771,929
Number of Sequences: 539616
Number of extensions: 4441787
Number of successful extensions: 12821
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 12802
Number of HSP's gapped (non-prelim): 27
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)