Query 023073
Match_columns 287
No_of_seqs 227 out of 1173
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:15:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023073.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023073hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00052 prolyl 4-hydroxylase; 100.0 1.5E-59 3.1E-64 435.4 24.5 216 70-286 41-256 (310)
2 KOG1591 Prolyl 4-hydroxylase a 100.0 5E-52 1.1E-56 380.8 17.6 262 8-286 10-288 (289)
3 smart00702 P4Hc Prolyl 4-hydro 100.0 7.9E-37 1.7E-41 262.7 18.5 174 83-281 1-178 (178)
4 PRK05467 Fe(II)-dependent oxyg 100.0 2E-29 4.4E-34 224.4 14.8 164 85-282 2-178 (226)
5 PHA02813 hypothetical protein; 99.8 9.6E-18 2.1E-22 155.7 12.8 149 96-278 24-178 (354)
6 PHA02869 C4L/C10L-like gene fa 99.7 1.5E-17 3.3E-22 156.2 11.8 138 108-281 45-190 (418)
7 COG3128 PiuC Uncharacterized i 99.7 1.4E-16 3E-21 135.8 11.5 165 84-282 3-181 (229)
8 PF13640 2OG-FeII_Oxy_3: 2OG-F 99.6 3.5E-16 7.6E-21 121.8 7.2 96 163-281 1-100 (100)
9 KOG3710 EGL-Nine (EGLN) protei 99.0 8.4E-09 1.8E-13 91.0 12.5 168 82-282 52-239 (280)
10 PF03336 Pox_C4_C10: Poxvirus 98.6 6.4E-07 1.4E-11 83.6 11.5 126 122-278 36-165 (339)
11 PF13661 2OG-FeII_Oxy_4: 2OG-F 98.6 1E-07 2.2E-12 69.9 5.0 52 160-215 10-65 (70)
12 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.5 9.3E-08 2E-12 73.9 3.8 90 161-281 2-97 (98)
13 COG3751 EGL-9 Predicted prolin 98.4 1.6E-06 3.5E-11 78.5 8.8 101 162-284 137-242 (252)
14 TIGR02408 ectoine_ThpD ectoine 98.1 5.4E-05 1.2E-09 69.8 13.3 187 79-278 25-245 (277)
15 PHA02866 Hypothetical protein; 98.0 2.5E-05 5.4E-10 71.7 8.7 132 107-278 31-165 (333)
16 PF05721 PhyH: Phytanoyl-CoA d 97.8 0.00016 3.6E-09 61.6 9.6 167 85-271 6-206 (211)
17 PF13759 2OG-FeII_Oxy_5: Putat 97.8 9.1E-05 2E-09 57.9 6.8 91 166-276 5-98 (101)
18 KOG3844 Predicted component of 97.7 0.00043 9.3E-09 66.0 11.2 175 81-284 33-219 (476)
19 PF09859 Oxygenase-NA: Oxygena 97.6 0.00026 5.6E-09 60.0 7.8 102 162-282 63-172 (173)
20 TIGR01762 chlorin-enz chlorina 97.3 0.017 3.6E-07 53.7 16.2 177 84-276 15-242 (288)
21 TIGR02466 conserved hypothetic 97.2 0.0019 4.1E-08 57.0 8.9 96 162-277 97-195 (201)
22 PF13532 2OG-FeII_Oxy_2: 2OG-F 96.7 0.011 2.5E-07 50.8 9.2 153 85-271 2-177 (194)
23 PF12851 Tet_JBP: Oxygenase do 96.0 0.028 6.1E-07 48.3 7.5 79 173-281 86-170 (171)
24 PRK15401 alpha-ketoglutarate-d 95.9 0.35 7.6E-06 43.1 14.1 159 81-271 16-196 (213)
25 KOG3200 Uncharacterized conser 94.9 0.12 2.6E-06 44.5 7.5 95 79-181 8-108 (224)
26 PHA02923 hypothetical protein; 94.9 0.18 3.9E-06 46.8 9.1 98 139-278 43-142 (315)
27 COG3826 Uncharacterized protei 93.0 0.47 1E-05 41.3 7.4 103 161-282 124-234 (236)
28 PLN02984 oxidoreductase, 2OG-F 90.3 3.3 7.2E-05 39.4 10.9 87 162-282 201-298 (341)
29 PLN03001 oxidoreductase, 2OG-F 89.3 3.9 8.5E-05 37.4 10.1 108 140-281 87-212 (262)
30 PLN02485 oxidoreductase 87.9 4.9 0.00011 37.8 10.2 109 142-282 156-287 (329)
31 PF06822 DUF1235: Protein of u 87.8 4.2 9.2E-05 37.3 9.1 107 139-284 32-139 (266)
32 PLN02904 oxidoreductase 87.5 6.7 0.00015 37.5 10.9 87 162-282 209-305 (357)
33 PLN00417 oxidoreductase, 2OG-F 87.3 5.4 0.00012 38.0 10.1 88 162-282 204-301 (348)
34 PLN02639 oxidoreductase, 2OG-F 85.7 9.8 0.00021 36.0 10.9 106 144-282 165-288 (337)
35 PLN02515 naringenin,2-oxogluta 85.6 7.5 0.00016 37.2 10.2 89 162-282 196-294 (358)
36 PLN02299 1-aminocyclopropane-1 85.6 8 0.00017 36.4 10.2 88 162-282 159-256 (321)
37 PLN02216 protein SRG1 85.2 7.1 0.00015 37.4 9.8 87 162-281 211-307 (357)
38 PLN02276 gibberellin 20-oxidas 84.5 11 0.00024 36.1 10.7 87 161-281 206-302 (361)
39 PF14033 DUF4246: Protein of u 84.5 2.9 6.4E-05 41.9 7.0 101 167-286 359-482 (501)
40 PLN02254 gibberellin 3-beta-di 84.1 10 0.00022 36.3 10.3 87 162-281 211-307 (358)
41 PLN02912 oxidoreductase, 2OG-F 84.0 11 0.00025 35.8 10.5 88 161-282 197-294 (348)
42 PLN02947 oxidoreductase 83.8 12 0.00026 36.1 10.7 87 162-282 226-322 (374)
43 PLN02750 oxidoreductase, 2OG-F 83.4 12 0.00027 35.5 10.5 90 161-282 193-292 (345)
44 PLN02758 oxidoreductase, 2OG-F 82.5 16 0.00034 35.0 10.9 87 162-281 212-309 (361)
45 PLN02365 2-oxoglutarate-depend 82.4 9.6 0.00021 35.5 9.2 110 141-281 124-248 (300)
46 PLN02997 flavonol synthase 81.9 8.6 0.00019 36.3 8.8 87 162-282 184-280 (325)
47 PLN02403 aminocyclopropanecarb 81.1 14 0.00031 34.5 9.8 87 163-282 155-252 (303)
48 COG3145 AlkB Alkylated DNA rep 80.9 31 0.00068 30.3 11.2 85 141-249 86-170 (194)
49 KOG3959 2-Oxoglutarate- and ir 80.5 2.4 5.3E-05 38.3 4.2 93 82-182 71-175 (306)
50 PTZ00273 oxidase reductase; Pr 79.8 26 0.00056 32.8 11.2 87 162-282 178-275 (320)
51 COG5285 Protein involved in bi 79.2 8.3 0.00018 36.0 7.4 93 173-279 132-227 (299)
52 TIGR00568 alkb DNA alkylation 78.1 24 0.00051 30.2 9.5 86 140-249 74-159 (169)
53 PLN02393 leucoanthocyanidin di 77.8 23 0.0005 33.9 10.4 88 162-282 214-311 (362)
54 PLN02156 gibberellin 2-beta-di 76.5 30 0.00065 32.8 10.6 87 162-281 179-277 (335)
55 COG3491 PcbC Isopenicillin N s 75.2 23 0.00051 33.4 9.2 88 160-280 173-270 (322)
56 PHA02985 hypothetical protein; 74.4 26 0.00057 32.1 9.1 106 139-284 39-144 (271)
57 PLN02704 flavonol synthase 73.9 14 0.00031 34.9 7.7 87 162-282 200-296 (335)
58 PLN03178 leucoanthocyanidin di 73.5 26 0.00056 33.5 9.5 88 162-283 212-309 (360)
59 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 71.7 9 0.0002 33.5 5.4 99 139-270 70-179 (195)
60 KOG0143 Iron/ascorbate family 71.2 36 0.00079 32.1 9.7 88 162-281 177-274 (322)
61 PF02668 TauD: Taurine catabol 67.6 6.4 0.00014 34.7 3.7 38 234-279 219-258 (258)
62 PLN03002 oxidoreductase, 2OG-F 67.1 40 0.00087 31.8 9.1 90 162-281 183-283 (332)
63 KOG4459 Membrane-associated pr 66.7 1.1 2.4E-05 44.0 -1.5 74 190-284 363-436 (471)
64 COG4340 Uncharacterized protei 56.0 21 0.00045 31.3 4.5 44 205-270 158-201 (226)
65 KOG4176 Uncharacterized conser 55.7 1.1E+02 0.0025 29.0 9.8 117 139-285 189-307 (323)
66 cd00250 CAS_like Clavaminic ac 53.8 19 0.0004 32.4 4.2 40 234-281 218-260 (262)
67 PF13677 MotB_plug: Membrane M 53.0 38 0.00082 23.6 4.7 24 1-24 1-24 (58)
68 KOG1971 Lysyl hydroxylase [Pos 48.1 20 0.00042 35.1 3.5 75 191-282 280-356 (415)
69 PRK09965 3-phenylpropionate di 37.3 71 0.0015 24.6 4.6 49 196-271 4-52 (106)
70 cd03528 Rieske_RO_ferredoxin R 36.8 64 0.0014 24.1 4.2 48 198-271 4-51 (98)
71 PF03579 SHP: Small hydrophobi 35.7 56 0.0012 23.0 3.3 29 12-40 13-41 (64)
72 COG2850 Uncharacterized conser 34.1 68 0.0015 31.0 4.7 32 149-181 107-139 (383)
73 cd03474 Rieske_T4moC Toluene-4 32.9 87 0.0019 24.0 4.5 27 236-271 26-52 (108)
74 cd03530 Rieske_NirD_small_Baci 32.3 72 0.0016 23.9 3.9 25 238-271 28-52 (98)
75 PF11807 DUF3328: Domain of un 30.9 85 0.0018 26.5 4.5 6 176-181 161-166 (217)
76 cd04338 Rieske_RO_Alpha_Tic55 29.7 90 0.002 25.3 4.2 70 191-285 14-85 (134)
77 PRK09553 tauD taurine dioxygen 29.1 35 0.00077 31.2 1.9 31 176-212 96-126 (277)
78 PF13621 Cupin_8: Cupin-like d 28.3 95 0.0021 26.9 4.5 41 234-283 207-248 (251)
79 cd03467 Rieske Rieske domain; 27.2 1.4E+02 0.003 22.2 4.7 28 258-285 39-68 (98)
80 cd03542 Rieske_RO_Alpha_HBDO R 27.2 83 0.0018 25.2 3.5 42 235-285 26-70 (123)
81 PF14851 FAM176: FAM176 family 26.9 53 0.0012 27.8 2.4 23 21-43 22-44 (153)
82 cd04337 Rieske_RO_Alpha_Cao Ca 26.0 1.2E+02 0.0025 24.5 4.3 56 191-271 14-69 (129)
83 TIGR02410 carnitine_TMLD trime 25.8 61 0.0013 30.9 3.0 43 234-285 311-353 (362)
84 PF00355 Rieske: Rieske [2Fe-2 25.8 1.2E+02 0.0027 22.4 4.1 29 235-272 26-54 (97)
85 PF14927 Neurensin: Neurensin 25.1 1.2E+02 0.0027 25.2 4.2 10 7-16 32-41 (140)
86 PRK06489 hypothetical protein; 24.1 1.9E+02 0.0042 27.0 6.0 16 82-97 69-84 (360)
87 PF15183 MRAP: Melanocortin-2 23.5 1.1E+02 0.0024 23.3 3.2 21 17-37 42-62 (90)
88 TIGR02409 carnitine_bodg gamma 23.1 89 0.0019 29.8 3.5 44 234-285 312-357 (366)
89 cd03480 Rieske_RO_Alpha_PaO Ri 22.9 2E+02 0.0043 23.4 5.1 70 191-285 14-87 (138)
90 cd03477 Rieske_YhfW_C YhfW fam 22.7 1.2E+02 0.0027 22.8 3.6 39 238-285 26-65 (91)
91 COG4813 ThuA Trehalose utiliza 22.6 4.6E+02 0.01 23.3 7.4 15 235-249 181-195 (261)
92 TIGR02223 ftsN cell division p 20.9 3.3E+02 0.0071 25.6 6.7 12 92-103 114-125 (298)
93 cd03478 Rieske_AIFL_N AIFL (ap 20.8 1.5E+02 0.0033 22.0 3.7 22 241-271 29-50 (95)
94 cd00250 CAS_like Clavaminic ac 20.8 1.1E+02 0.0023 27.4 3.4 38 171-214 93-130 (262)
95 cd03535 Rieske_RO_Alpha_NDO Ri 20.5 1.1E+02 0.0024 24.3 3.1 52 196-271 4-55 (123)
96 PF15330 SIT: SHP2-interacting 20.2 87 0.0019 24.8 2.3 15 26-40 6-20 (107)
No 1
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=100.00 E-value=1.5e-59 Score=435.35 Aligned_cols=216 Identities=53% Similarity=0.952 Sum_probs=198.6
Q ss_pred CCCceeEEEEecCCCEEEEcCCCCHHHHHHHHHHhcCCCCcceeEeCCCCCccccceeeccceeecCCchHHHHHHHHHH
Q 023073 70 GRAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRI 149 (287)
Q Consensus 70 ~~~~~~~e~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri 149 (287)
.-.+.|+|+||++|+|++|+||||++||++||+++++.+++|.++++.+|+...+++|||+++|++..+++++++|++||
T Consensus 41 ~~~~~kve~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~dpvv~~I~~Ri 120 (310)
T PLN00052 41 PFNASRVKAVSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQDPVVSRIEERI 120 (310)
T ss_pred CcCCceEEEecCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCCCHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999888777777888999999999987789999999999
Q ss_pred HhhcCCCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCcccccc
Q 023073 150 ADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELS 229 (287)
Q Consensus 150 ~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~ 229 (287)
++++++|.+++|++||+||++||+|++|+|++.+..+...+++|++|+|+||||+++||||+||.++. ....+.++.++
T Consensus 121 a~~t~lp~~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~-~~~~~~~~~~s 199 (310)
T PLN00052 121 AAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEG-WENQPKDDTFS 199 (310)
T ss_pred HHHhCCCcccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCccc-ccccccccchh
Confidence 99999999999999999999999999999998764444567899999999999999999999998743 22334567789
Q ss_pred ccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeeecccc
Q 023073 230 ECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 286 (287)
Q Consensus 230 ~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 286 (287)
+|.+.+++|+|++|+||||+|+++||+.|++++|+||||++|+||++|+|||.++|.
T Consensus 200 ~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~~~ 256 (310)
T PLN00052 200 ECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRSYE 256 (310)
T ss_pred hhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeeccccc
Confidence 999999999999999999999999999999999999999999999999999999884
No 2
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-52 Score=380.82 Aligned_cols=262 Identities=47% Similarity=0.764 Sum_probs=214.3
Q ss_pred CCCCCCCc--hHHHHHHHHHHHHHHHHHHHHhhhccCCC---CCCCCCCCCCcchhhhccCCCC-------CCCCCCcee
Q 023073 8 RFPTRKSS--SSTLILTLLIMFTFAILILLAFGILSMPS---SSGDSRKANDLSSIVRKSMESE-------GDEGRAEQW 75 (287)
Q Consensus 8 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 75 (287)
+...+++. ..+.++.++.....+...+..+..+..+. ...+..-.+++....+...... +....++.|
T Consensus 10 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~g~~~~~~~~~~~~~~~~~~~~~~~~~ap~k 89 (289)
T KOG1591|consen 10 KLGILKSALSLLTEVFSILPESIRALDNLKQLEQLLDKEQEFTVYEQGCRGELPPLTKLTLRRLSCRNRAGPFLRLAPVK 89 (289)
T ss_pred eccchHhhhhhcchhhhcchhhHHHhhhhhhhhhhccccccccchhhhccCccCccchhHhhhhhcccccCcceeecchh
Confidence 44455533 34666777767667777777777777766 2222122223322222211111 334568999
Q ss_pred EEEEecCCCEEEEcCCCCHHHHHHHHHHhcCCCCcceeE-eCCCCCccccceeeccceeecCCchHHHHHHHHHHHhhcC
Q 023073 76 VEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVV-DSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTF 154 (287)
Q Consensus 76 ~e~ls~~P~i~vi~nfLs~eEC~~Li~~a~~~~~~s~v~-~~~~g~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~~g 154 (287)
+|++||+|++++||||||++||++|+.++++.+.++++. +..+|......+|+|+++|+..+.+++++.|++||+++++
T Consensus 90 ~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~~t~l~~~~~~~~~~i~~ri~~~T~ 169 (289)
T KOG1591|consen 90 LEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSSGTFLPDGASPVVSRIEQRIADLTG 169 (289)
T ss_pred hhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecceeEecCCCCHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999984 5555777777799999999998789999999999999999
Q ss_pred CCCCCCcccEEEEcCCCCccccCcCCccc---c-cccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccc
Q 023073 155 FPLENGEGLQVLHYEAGQKYEPHFDYFMD---E-FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSE 230 (287)
Q Consensus 155 ~p~~~~E~lqv~rY~~G~~y~~H~D~~~~---~-~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~ 230 (287)
+|.+.+|.+||++|+.||+|.+|+|++.+ . ++..++++|++|+++||+|+++||+|+||.++.
T Consensus 170 l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~v~~GG~TvFP~~~~------------- 236 (289)
T KOG1591|consen 170 LPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSDVEQGGETVFPNLGM------------- 236 (289)
T ss_pred CCcccCccceEEEecCCccccccccccccccchhhhhcccCCcceeEEEEecccCCCCcccCCCCCC-------------
Confidence 99999999999999999999999999952 2 345678999999999999999999999998632
Q ss_pred cCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeeecccc
Q 023073 231 CGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 286 (287)
Q Consensus 231 c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~~ 286 (287)
.++|+|++|+|++|+|+++||..|+++.|++|||+.|+||+.|+|||+..+.
T Consensus 237 ----~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~~~~ 288 (289)
T KOG1591|consen 237 ----KPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEKNQE 288 (289)
T ss_pred ----cccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeecccc
Confidence 2599999999999999999999999999999999999999999999998765
No 3
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=100.00 E-value=7.9e-37 Score=262.67 Aligned_cols=174 Identities=44% Similarity=0.739 Sum_probs=151.2
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhcCCCCcceeEeCCCCCccccceeeccceeecCCc-hHHHHHHHHHHHhhcCCC---CC
Q 023073 83 PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGR-DKIIRDIEKRIADFTFFP---LE 158 (287)
Q Consensus 83 P~i~vi~nfLs~eEC~~Li~~a~~~~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~-d~v~~~i~~Ri~~~~g~p---~~ 158 (287)
|.|++++||||++||++||+++++...++.+.++..+....+++|+|..+|+.... ++++++|++||.++++.+ ..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 80 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLADFLGLLRGLPL 80 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHHHHHCCCchhhc
Confidence 78999999999999999999999987778776654433356789999999998754 789999999999999988 67
Q ss_pred CCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEE
Q 023073 159 NGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSI 238 (287)
Q Consensus 159 ~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V 238 (287)
..|.+|+++|.+|++|.+|+|..... ..++|.+|+++||||+++||+|.|+..+. .....|
T Consensus 81 ~~~~~~~~~Y~~g~~~~~H~D~~~~~----~~~~r~~T~~~yLn~~~~GG~~~f~~~~~---------------~~~~~v 141 (178)
T smart00702 81 SAEDAQVARYGPGGHYGPHVDNFEDD----ENGDRIATFLLYLNDVEEGGELVFPGLGL---------------MVCATV 141 (178)
T ss_pred cCcceEEEEECCCCcccCcCCCCCCC----CCCCeEEEEEEEeccCCcCceEEecCCCC---------------ccceEE
Confidence 88999999999999999999997642 12689999999999999999999997531 135699
Q ss_pred ecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 239 KPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 239 ~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
+|++|++|+|++. ++.++|++|||.+|+||++++|+|
T Consensus 142 ~P~~G~~v~f~~~------~~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 142 KPKKGDLLFFPSG------RGRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred eCCCCcEEEEeCC------CCCccccCCcceeCCEEEEEEEEC
Confidence 9999999999974 237999999999999999999986
No 4
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.96 E-value=2e-29 Score=224.44 Aligned_cols=164 Identities=24% Similarity=0.320 Sum_probs=125.6
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCC-CCcceeEeCCCCCccccceeeccceeecCCchHHHHHHHHHHHhhc---------C
Q 023073 85 AFVYHNFLSKEECEYLINLATPH-MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFT---------F 154 (287)
Q Consensus 85 i~vi~nfLs~eEC~~Li~~a~~~-~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~~---------g 154 (287)
|++|+|+||++||+++++..+.. +.++.+ +.+...+++|++.++-. ++++++.|.++|.+.+ +
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~~~~dg~~----taG~~~~~vKnN~ql~~---d~~~a~~l~~~i~~~L~~~~l~~sa~ 74 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAAEWVDGRV----TAGAQAAQVKNNQQLPE---DSPLARELGNLILDALTRNPLFFSAA 74 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhcCCccCCc----CcCccchhcccccccCC---CCHHHHHHHHHHHHHHhcCchhhhhc
Confidence 68999999999999999999853 333222 23345678998876542 2566667776666543 3
Q ss_pred CCCCCCcccEEEEcCCCCccccCcCCcccccc-cCCCCceEEEEEEeccCCC--CCceeeecCCCCCCCCCCcccccccc
Q 023073 155 FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFN-TKNGGQRMATVLMYLSDVE--EGGETVFPNAQGNISAVPWWNELSEC 231 (287)
Q Consensus 155 ~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~-~~~~~~R~~T~llYLND~~--eGGeT~Fp~~~~~~~~~~~~~~~~~c 231 (287)
+|.. ..+++++||.+|++|++|+|+...... .....+|.+|+++||||++ +||||+|+...
T Consensus 75 lp~~-i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~--------------- 138 (226)
T PRK05467 75 LPRK-IHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTY--------------- 138 (226)
T ss_pred cccc-cccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCC---------------
Confidence 4433 357899999999999999999764211 1112356899999999874 89999998642
Q ss_pred CCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 232 GKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 232 ~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
....|+|++|++|+|++ .++|+|+||++|.||+++.|++.
T Consensus 139 --g~~~Vkp~aG~~vlfps---------~~lH~v~pVt~G~R~~~~~Wi~S 178 (226)
T PRK05467 139 --GEHRVKLPAGDLVLYPS---------TSLHRVTPVTRGVRVASFFWIQS 178 (226)
T ss_pred --CcEEEecCCCeEEEECC---------CCceeeeeccCccEEEEEecHHH
Confidence 35789999999999986 79999999999999999999874
No 5
>PHA02813 hypothetical protein; Provisional
Probab=99.75 E-value=9.6e-18 Score=155.67 Aligned_cols=149 Identities=17% Similarity=0.229 Sum_probs=111.2
Q ss_pred HHHHHHHHhcCCCCcceeEeCCCC-CccccceeeccceeecCCchHHHHHHHHHHHhhc-CCC----CCCCcccEEEEcC
Q 023073 96 ECEYLINLATPHMRKSTVVDSDTG-KSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFT-FFP----LENGEGLQVLHYE 169 (287)
Q Consensus 96 EC~~Li~~a~~~~~~s~v~~~~~g-~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~~-g~p----~~~~E~lqv~rY~ 169 (287)
+.-.+|+...-.+.+|.+.+..+| +...+++|+++++.++.. +.+.++|++.|.+-+ +.+ ++.+|.++++||.
T Consensus 24 ~l~~~i~~~d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~-~~L~erIr~~Lp~~l~~~~lv~~V~vnerirfyrY~ 102 (354)
T PHA02813 24 IIMDMIKYKDIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL-DDIFKVIRKKLLLSFEFPQKISDIILDNTITLIKYE 102 (354)
T ss_pred HHHHHHhccccCccccceeccccCceEEccccccceEEEEcCH-HHHHHHHHHhhHHHhcCCccceeEEEcceEEEEEEC
Confidence 333444433334678888886555 457889999999988853 455556555555433 322 4678999999999
Q ss_pred CCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEe
Q 023073 170 AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW 249 (287)
Q Consensus 170 ~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~ 249 (287)
+||+|.+|.|+.... .+ ..+..|+|+|||++++||||.|...+ .-+|. .|++|+|.
T Consensus 103 kGq~F~~H~Dg~~~r---~k-~~s~~tLLLYLN~~~~GGeT~f~~~~------------------~tsI~--~g~dlLFd 158 (354)
T PHA02813 103 KGDFFNNHRDFIHFK---SK-NCYCYHLVLYLNNTSKGGNTNIHIKD------------------NTIFS--TKNDVLFD 158 (354)
T ss_pred CCcccCcccCCceee---cC-CceEEEEEEEEeccCCCCceEEEcCC------------------CceEe--ecceEEEe
Confidence 999999999986431 11 23899999999999999999999642 12566 99999995
Q ss_pred cCCCCCCCCCCCccccCCcccccEEEEEe
Q 023073 250 SMKPDASLDPSSLHGGCPVIKGNKWSSTK 278 (287)
Q Consensus 250 n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 278 (287)
....|+|++|.+|.||++..
T Consensus 159 ---------h~l~Heg~~V~sG~KyVa~~ 178 (354)
T PHA02813 159 ---------KTLNHSSDIITDGEKNIALI 178 (354)
T ss_pred ---------cccccCCcEeccCeEEEEEE
Confidence 58999999999999998754
No 6
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=99.73 E-value=1.5e-17 Score=156.24 Aligned_cols=138 Identities=20% Similarity=0.242 Sum_probs=108.8
Q ss_pred CCcceeEeCCCC-CccccceeeccceeecCCchHHHHHHHHHHHhh-----cCC--CCCCCcccEEEEcCCCCccccCcC
Q 023073 108 MRKSTVVDSDTG-KSKDSRVRTSSGTFLARGRDKIIRDIEKRIADF-----TFF--PLENGEGLQVLHYEAGQKYEPHFD 179 (287)
Q Consensus 108 ~~~s~v~~~~~g-~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~-----~g~--p~~~~E~lqv~rY~~G~~y~~H~D 179 (287)
+.+|.+.+..+| +-.+...|+|.+..+. +.+.+.|.+||+.+ -+. .++.+|.++++||.+||+|++|.|
T Consensus 45 ~~~s~i~~~~~g~e~~~~~~~ksKqii~e---~~La~~L~erlr~lLp~~lk~~v~~V~lnerirfyrY~kGq~F~~H~D 121 (418)
T PHA02869 45 CEDSKIFFPEKRTELLSIKDRKSKQIVFE---NSLNDDLLKKLHALIYDELSTVVDSVTVENTVTLIMYEKGDYFARHRD 121 (418)
T ss_pred cccceeeccccCceeEeeccccceeEEec---hHHHHHHHHHHHHhhhHHhhCccceEEEcceEEEEEECCCCccccccc
Confidence 567888886666 3356667899887776 34556666666554 232 457789999999999999999999
Q ss_pred CcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCC
Q 023073 180 YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDP 259 (287)
Q Consensus 180 ~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~ 259 (287)
+... ..+.....|+++|||++++||||.|+.. ...+|.|+.| |+|. .
T Consensus 122 g~~~----rs~e~s~~tLLLYLNd~~~GGET~f~~~------------------~~~sI~pksg--LLFd---------h 168 (418)
T PHA02869 122 FSTV----FSKNIICVHLLLYLEQPETGGETVIYID------------------NNTSVKLKTD--HLFD---------K 168 (418)
T ss_pred Ccee----cCCCEEEEEEEEEEeccCCCCceEEEeC------------------CCceEecCCC--eEec---------c
Confidence 8653 2355678999999999999999999972 2467999999 8885 5
Q ss_pred CCccccCCcccccEEEEEeeee
Q 023073 260 SSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 260 ~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
...|+|++|.+|.||+++.=+-
T Consensus 169 ~l~Heg~~V~sG~KyVartDVm 190 (418)
T PHA02869 169 TIEHESITVESGRKCVALFDVL 190 (418)
T ss_pred ccccCCcEeecCeEEEEEEEEE
Confidence 8999999999999999986543
No 7
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=99.70 E-value=1.4e-16 Score=135.82 Aligned_cols=165 Identities=22% Similarity=0.324 Sum_probs=118.0
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCCCCcceeEeCC-CCCccccceeeccceeecCCchHHHHHHHHHHHh-------hcC-
Q 023073 84 RAFVYHNFLSKEECEYLINLATPHMRKSTVVDSD-TGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIAD-------FTF- 154 (287)
Q Consensus 84 ~i~vi~nfLs~eEC~~Li~~a~~~~~~s~v~~~~-~g~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~-------~~g- 154 (287)
..+-|+.+||+++|.++.+..+. +..++++ +.+.....+|++.++-.+ .+..+.+..-|.+ +++
T Consensus 3 m~lhIp~VLs~a~va~iRa~l~~----A~w~dGrat~g~q~a~vk~n~qlp~~---s~l~~~vg~~il~al~~~plff~a 75 (229)
T COG3128 3 MMLHIPEVLSEAQVARIRAALEQ----AEWVDGRATQGPQGAQVKNNLQLPQD---SALARELGNEILQALTAHPLFFAA 75 (229)
T ss_pred eEEechhhCCHHHHHHHHHHHhh----ccccccccccCcchhhhhccccCCcc---cHHHHHHHHHHHHHHHhchhHHHh
Confidence 45678999999999999988763 3334433 223344556766644332 3444444333322 222
Q ss_pred -CCCCCCcccEEEEcCCCCccccCcCCcccccccCCC--CceEEEEEEeccCCC--CCceeeecCCCCCCCCCCcccccc
Q 023073 155 -FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNG--GQRMATVLMYLSDVE--EGGETVFPNAQGNISAVPWWNELS 229 (287)
Q Consensus 155 -~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~--~~R~~T~llYLND~~--eGGeT~Fp~~~~~~~~~~~~~~~~ 229 (287)
+|. ..+++++.||+.|++|.+|.|+.........+ -...+++.++|+|++ +|||++..+..
T Consensus 76 ALp~-t~~~P~Fn~Y~eg~~f~fHvDgavr~~hp~~~~~lrtdls~tlfl~DPedYdGGeLVv~dtY------------- 141 (229)
T COG3128 76 ALPR-TCLPPLFNRYQEGDFFGFHVDGAVRSIHPGSGFRLRTDLSCTLFLSDPEDYDGGELVVNDTY------------- 141 (229)
T ss_pred hccc-ccCCchhhhccCCCcccccccCcccccCCCCCceeEeeeeeeeecCCccccCCceEEEeccc-------------
Confidence 332 35689999999999999999997654222222 234577899999986 89999998753
Q ss_pred ccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 230 ECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 230 ~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+...||-.+|++|+|++ .++|++.||+.|+|+.+..|++.
T Consensus 142 ----g~h~VklPAGdLVlypS---------tSlH~VtPVTRg~R~asffW~qs 181 (229)
T COG3128 142 ----GNHRVKLPAGDLVLYPS---------TSLHEVTPVTRGERFASFFWIQS 181 (229)
T ss_pred ----cceEEeccCCCEEEccc---------ccceeccccccCceEEEeeehHH
Confidence 47889999999999996 89999999999999999999874
No 8
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=99.64 E-value=3.5e-16 Score=121.80 Aligned_cols=96 Identities=36% Similarity=0.574 Sum_probs=70.0
Q ss_pred cEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCC---CCceeeecCCCCCCCCCCccccccccCCcCeEEe
Q 023073 163 LQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE---EGGETVFPNAQGNISAVPWWNELSECGKTGLSIK 239 (287)
Q Consensus 163 lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~---eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~ 239 (287)
.|+.+|.+|++|+||+|... ...+.+|+++|||+++ +||+|+|.... ... +....+. ...++
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~-------~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~--~~~~~~~-----~~~~~ 65 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSY-------DPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSD--DVSREVE-----DFDIV 65 (100)
T ss_dssp -EEEEEETTEEEEEEESSSC-------CCSEEEEEEEESS-CS-HCEE--EEETTTS--TS--STCEEEG-----GGSEE
T ss_pred CEEEEECcCCEEeeeECCCC-------CCcceEEEEEEECCCCcccCCCEEEEeccc-cCC--CcceEEE-----ecccc
Confidence 47999999999999999753 3579999999999876 99999998743 100 0000000 11233
Q ss_pred cCCceEEEEecCCCCCCCCCCCccccCCc-ccccEEEEEeeee
Q 023073 240 PKMGDALLFWSMKPDASLDPSSLHGGCPV-IKGNKWSSTKWIR 281 (287)
Q Consensus 240 Pk~G~alvF~n~~~~g~~D~~~lH~g~PV-~~G~K~i~~~W~~ 281 (287)
|+.|++|+|++ ..++|++.|| ..|.|++++.|++
T Consensus 66 p~~g~~v~F~~--------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 66 PKPGRLVIFPS--------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp -BTTEEEEEES--------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred CCCCEEEEEeC--------CCCeecCcccCCCCCEEEEEEEEC
Confidence 99999999986 4899999999 9999999999986
No 9
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=98.98 E-value=8.4e-09 Score=91.01 Aligned_cols=168 Identities=26% Similarity=0.394 Sum_probs=111.2
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcC-----CCCcceeEeCCCCCccccceeeccceeecCCch--HHH----HHHHHHHH
Q 023073 82 EPRAFVYHNFLSKEECEYLINLATP-----HMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRD--KII----RDIEKRIA 150 (287)
Q Consensus 82 ~P~i~vi~nfLs~eEC~~Li~~a~~-----~~~~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d--~v~----~~i~~Ri~ 150 (287)
+=.+.+++|||-.+--..+.+..+. .+.+..++... ....+++|.....|+...+. ..+ ..|..-+.
T Consensus 52 e~g~~vvd~flg~~~g~~v~~ev~~l~~~G~f~dgql~~~~--~~~~k~iRgd~i~wi~G~e~gc~~i~~L~s~~d~~i~ 129 (280)
T KOG3710|consen 52 EYGICVVDNFLGSETGKFILKEVEALYETGAFRDGQLVSPD--AFHSKDIRGDKITWVGGNEPGCETIMLLPSPIDSVIL 129 (280)
T ss_pred hcceEEEechhhHHHHHHHHHHHHHHHhccCccCceeccCc--CCcchhhccCCceEecCCCCCccceeeecccchhhhh
Confidence 4457889999998876666665543 35555554422 22345789888999976421 011 11111111
Q ss_pred hhc---CCCCCCCcccEEEEcCC-CCccccCcCCcccccccCCCCceEEEEEEeccC---CC-CCcee-eecCCCCCCCC
Q 023073 151 DFT---FFPLENGEGLQVLHYEA-GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSD---VE-EGGET-VFPNAQGNISA 221 (287)
Q Consensus 151 ~~~---g~p~~~~E~lqv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND---~~-eGGeT-~Fp~~~~~~~~ 221 (287)
... +-..-.-..-.|..|.. |-.|-.|+|... +-.|.+|++.|||. +. .||-+ .||....
T Consensus 130 h~~~r~~~~~~gRtkAMVAcYPGNGtgYVrHVDNP~-------gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~---- 198 (280)
T KOG3710|consen 130 HCNGRLGSYIIGRTKAMVACYPGNGTGYVRHVDNPH-------GDGRCITCIYYLNQNWDVKVHGGILRIFPEGST---- 198 (280)
T ss_pred hhccccccccccceeEEEEEecCCCceeeEeccCCC-------CCceEEEEEEEcccCcceeeccceeEeccCCCC----
Confidence 111 11111134678899985 668999999753 45699999999994 33 45554 6675543
Q ss_pred CCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 222 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 222 ~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
.-..|.|+.++.||||| |.+-.|++.|+.. +||.++.|+-.
T Consensus 199 ------------~~adieP~fdrLlffwS-------drrnPhev~Pa~~-tryaitvwyfd 239 (280)
T KOG3710|consen 199 ------------TFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFD 239 (280)
T ss_pred ------------cccccCcCCCeEEEEEe-------cCCCccccccccc-cceEEEEEEec
Confidence 24569999999999998 6788999999987 59999999854
No 10
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=98.56 E-value=6.4e-07 Score=83.63 Aligned_cols=126 Identities=21% Similarity=0.271 Sum_probs=90.8
Q ss_pred cccceeeccceeecC-CchHHHHHHHHHHHhhc-C--CCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEE
Q 023073 122 KDSRVRTSSGTFLAR-GRDKIIRDIEKRIADFT-F--FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATV 197 (287)
Q Consensus 122 ~~~~~Rts~~~~l~~-~~d~v~~~i~~Ri~~~~-g--~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~ 197 (287)
.+...|.|++..+.. ..+++.++|++.|..-+ . ..+...+.+.+.+|..|++|..|.|.... ........++
T Consensus 36 ~d~~~r~sk~iv~~~~~~~dI~~~ik~~l~~~lk~~v~~V~V~n~iTfikY~kGd~f~~~~d~~~~----~~~n~~~y~L 111 (339)
T PF03336_consen 36 FDHEFRKSKQIVIEDSLNDDIFSKIKNLLYDELKNVVEDVIVDNTITFIKYEKGDFFDNHRDFIKR----DSKNCLEYHL 111 (339)
T ss_pred ccccccccceEEEeccchHHHHHHHHHHHHHHhhcceeEEEEcceEEEEEEccCcchhhhccccee----ccCCceEEEE
Confidence 334488888876662 34678888887776532 2 12334578999999999999999994322 3345678999
Q ss_pred EEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEE
Q 023073 198 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSST 277 (287)
Q Consensus 198 llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~ 277 (287)
++|||.+.+||+|.++-.+. ..-.|.+ ++-++| |....|++.+|.+|.|+++.
T Consensus 112 vLyL~~~~~GGktkiyi~~~----------------~~tvI~~--~~DvLF---------dKsl~h~s~~V~~G~K~VAl 164 (339)
T PF03336_consen 112 VLYLNNPENGGKTKIYIDPN----------------DNTVIST--SEDVLF---------DKSLNHESIIVEEGRKIVAL 164 (339)
T ss_pred EEEEeccCCCceEEEEECCC----------------Cceeeec--cccEEE---------eccccccceEeccCeEEEEE
Confidence 99999999999999874221 1112433 666778 46899999999999999964
Q ss_pred e
Q 023073 278 K 278 (287)
Q Consensus 278 ~ 278 (287)
.
T Consensus 165 ~ 165 (339)
T PF03336_consen 165 F 165 (339)
T ss_pred E
Confidence 3
No 11
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=98.56 E-value=1e-07 Score=69.94 Aligned_cols=52 Identities=27% Similarity=0.464 Sum_probs=43.4
Q ss_pred CcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEecc----CCCCCceeeecCC
Q 023073 160 GEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLS----DVEEGGETVFPNA 215 (287)
Q Consensus 160 ~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLN----D~~eGGeT~Fp~~ 215 (287)
.+.++..+|..|++|++|+|..... .+.+|.+|+++||| +..+||++.|...
T Consensus 10 ~~~~~~~~~~~g~~~~~H~D~~~~~----~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~ 65 (70)
T PF13661_consen 10 RPNFRFYRYRRGDFFGWHVDADPSS----SGKRRFLTLLLYLNEDWDEDFGGGELFFDDD 65 (70)
T ss_pred CcceeEEEcCCCCEeeeeEcCCccc----cccceeEEEEEEecccccCccCCcEEEEeCC
Confidence 4679999999999999999986532 25789999999999 4567899999864
No 12
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.51 E-value=9.3e-08 Score=73.92 Aligned_cols=90 Identities=22% Similarity=0.344 Sum_probs=56.5
Q ss_pred cccEEEEcC---CCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeE
Q 023073 161 EGLQVLHYE---AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLS 237 (287)
Q Consensus 161 E~lqv~rY~---~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~ 237 (287)
+.+++.+|. .+..+.+|+|.. .+.+|++++ +++|++.|...+ ..+.
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----------~~~~Til~~----~~~~gL~~~~~~-----------------~~~~ 50 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----------DGLLTILFQ----DEVGGLQVRDDG-----------------EWVD 50 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------------SSEEEEEE----TSTS-EEEEETT-----------------EEEE
T ss_pred CEEEEEECCCcccCCceeCCCcCC----------CCeEEEEec----ccchheeccccc-----------------cccC
Confidence 468999999 899999999963 468999999 678999998642 3466
Q ss_pred EecCCceEEEEe-cCC--CCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 238 IKPKMGDALLFW-SMK--PDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 238 V~Pk~G~alvF~-n~~--~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
|.|..+..++.. +.. -.+......+|+++++.+|.|++++.|++
T Consensus 51 v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~ 97 (98)
T PF03171_consen 51 VPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLR 97 (98)
T ss_dssp ----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred ccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence 777766655554 210 11334678999999999999999999986
No 13
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=1.6e-06 Score=78.46 Aligned_cols=101 Identities=29% Similarity=0.322 Sum_probs=77.1
Q ss_pred ccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccC---CCCCcee-eecCCCCCCCCCCccccccccCCcCeE
Q 023073 162 GLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSD---VEEGGET-VFPNAQGNISAVPWWNELSECGKTGLS 237 (287)
Q Consensus 162 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND---~~eGGeT-~Fp~~~~~~~~~~~~~~~~~c~~~~l~ 237 (287)
+.|+..|.+|.+|..|-|.+.+ ...|.+|.++|+|. ++-|||. .|+....+... +..-.+
T Consensus 137 e~~~~~y~~G~~l~~H~D~~~~------~~~R~~~yv~y~~r~wkpe~GGeL~l~~s~~~~~~~----------~~~~~t 200 (252)
T COG3751 137 EGQITVYNPGCFLLKHDDNGRD------KDIRLATYVYYLTREWKPEYGGELRLFHSLQKNNTA----------ADSFKT 200 (252)
T ss_pred eeeeeEecCCceeEeecccCCC------ccceEEEEEeccCCCCCcCCCCceeecccccccccc----------cccccc
Confidence 6999999999999999998753 45799999999997 4789999 77765422110 113467
Q ss_pred EecCCceEEEEecCCCCCCCCCCCccccCCcc-cccEEEEEeeeeecc
Q 023073 238 IKPKMGDALLFWSMKPDASLDPSSLHGGCPVI-KGNKWSSTKWIRVNE 284 (287)
Q Consensus 238 V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~W~~~~~ 284 (287)
|.|+-+..++|-+-. ..+.|.+.+|. .+.|.++++|++.+.
T Consensus 201 i~P~fn~lv~F~s~~------~Hs~h~V~~~~~~~~RlsV~GW~r~~~ 242 (252)
T COG3751 201 IAPVFNSLVFFKSRP------SHSVHSVEEPYAAADRLSVTGWFRRPG 242 (252)
T ss_pred cCCCCceEEEEEecC------CccceeccccccccceEEEeeEEecCC
Confidence 999999999998621 13788888754 458999999998653
No 14
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=98.12 E-value=5.4e-05 Score=69.76 Aligned_cols=187 Identities=14% Similarity=0.161 Sum_probs=95.5
Q ss_pred EecCCCEEEEcCCCCHHHHHHHHHHhcCCCCcceeEeCCCCC--ccccceeeccceeecCCchHHHH------HHHHHHH
Q 023073 79 ISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGK--SKDSRVRTSSGTFLARGRDKIIR------DIEKRIA 150 (287)
Q Consensus 79 ls~~P~i~vi~nfLs~eEC~~Li~~a~~~~~~s~v~~~~~g~--~~~~~~Rts~~~~l~~~~d~v~~------~i~~Ri~ 150 (287)
...+- .+++++||+++||+.|.+..+..+..........+. ......|. .+.....++.+. +|.+.++
T Consensus 25 f~~dG-yvvl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~---~~~~~~~~~~~~~l~~~p~l~~~~~ 100 (277)
T TIGR02408 25 YERDG-FLLLENLFSDDEVAALLAEVERMTRDPAIVRDEEAITEPGSNAVRS---IFEVHVLSPILARLVRDPRVANAAR 100 (277)
T ss_pred HHHCC-EEECcccCCHHHHHHHHHHHHHHHhcccccCCCcceecCCCCceEE---EecccccCHHHHHHHcChHHHHHHH
Confidence 33344 469999999999999999887653321110000000 00111221 111111234333 3445556
Q ss_pred hhcCCCCCCCcccEEEEcC-CCCccccCcCCcccccccCCCCceEEEEEEeccCCC-CCceeee-cCCCCCC----CCCC
Q 023073 151 DFTFFPLENGEGLQVLHYE-AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNI----SAVP 223 (287)
Q Consensus 151 ~~~g~p~~~~E~lqv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~-eGGeT~F-p~~~~~~----~~~~ 223 (287)
++.|-++......-+.++. .|+.+.||.|...-.........+.+|+.++|.|+. +.|.+.| |...... ...+
T Consensus 101 ~LlG~~~~l~~~~l~~kp~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~t~eNG~l~vIPGSH~~~~~~~~~~~ 180 (277)
T TIGR02408 101 QILGSDVYVHQSRINMKPGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDNNETNGPLMLVPGSHRTFISCVGETP 180 (277)
T ss_pred HHcCCCeEEEeeeeeecCCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccCCCCCCCEEEecCCCCCcccCCcccc
Confidence 6666443221111123344 356788999964210000011236899999999986 3366665 5443210 0000
Q ss_pred --cccc--------cccc-------C-CcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc-cEEEEEe
Q 023073 224 --WWNE--------LSEC-------G-KTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTK 278 (287)
Q Consensus 224 --~~~~--------~~~c-------~-~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~ 278 (287)
.++. ..+. . ..-+.+.-++|++|||. ..++|++-|..+. .|+++..
T Consensus 181 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~---------~~~~H~S~~N~s~~~R~~l~l 245 (277)
T TIGR02408 181 RDNYKQSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFD---------CNTMHGSGSNITPWPRSNVFM 245 (277)
T ss_pred chhhhhhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEc---------cccccCCCCCCCCCcceeEEE
Confidence 0100 0000 0 11235667999999995 5899999999876 4555543
No 15
>PHA02866 Hypothetical protein; Provisional
Probab=98.02 E-value=2.5e-05 Score=71.73 Aligned_cols=132 Identities=16% Similarity=0.213 Sum_probs=90.1
Q ss_pred CCCcceeEeCCCC-CccccceeeccceeecCCchHHHHHHHHHHHhhcC--CCCCCCcccEEEEcCCCCccccCcCCccc
Q 023073 107 HMRKSTVVDSDTG-KSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTF--FPLENGEGLQVLHYEAGQKYEPHFDYFMD 183 (287)
Q Consensus 107 ~~~~s~v~~~~~g-~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~~g--~p~~~~E~lqv~rY~~G~~y~~H~D~~~~ 183 (287)
.+.+|.+.+.+.| .-.....|.|.++ +++..+++ |+-.+.. ..+-..+.+.+.+|..|.+|.-|.|....
T Consensus 31 ~w~~s~i~~~~~~i~~~~~~~~k~k~~------~~v~~~v~-~~~~~~~~~~dv~v~~~~t~vk~~kg~~fdn~~~~~~~ 103 (333)
T PHA02866 31 SWEDSDILRHRQFIPCEILVLEKSERT------KQVFGAVK-RVLASSLTDYDVYVCEHLTIVKCFKGVGFDNRFSILTE 103 (333)
T ss_pred ccchhhhhhhccCCceeeeehhhhhhh------HHHHHHHH-HHHhccCCCccEEEeeeEEEEEEecccccccceeEEEe
Confidence 3777887765544 2344556666544 56777776 5554432 22234567999999999999999987543
Q ss_pred ccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCcc
Q 023073 184 EFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLH 263 (287)
Q Consensus 184 ~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH 263 (287)
.....+-.++++||+.+.+||+|.++-.+. ++--.+-+ ++| |....|
T Consensus 104 ----~~~~~~~Y~LvLyL~~p~~GGkt~iyv~~~-------------------t~i~~~~D-vLF---------DKsl~h 150 (333)
T PHA02866 104 ----DRHRGREYTLVLHLSSPKNGGKTDVCVGDK-------------------TVISTADD-FLL---------EKRSEQ 150 (333)
T ss_pred ----ccCCceEEEEEEEEeccccCCceEEEeCCC-------------------ceEeeccc-eee---------eccccc
Confidence 223457899999999999999999995321 11111223 566 468999
Q ss_pred ccCCcccccEEEEEe
Q 023073 264 GGCPVIKGNKWSSTK 278 (287)
Q Consensus 264 ~g~PV~~G~K~i~~~ 278 (287)
+..-|.+|.|.++-.
T Consensus 151 ~S~~V~~G~K~Vali 165 (333)
T PHA02866 151 LSNVVQEGEKIVVAV 165 (333)
T ss_pred cceeeecCcEEEEEE
Confidence 999999999987643
No 16
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=97.79 E-value=0.00016 Score=61.57 Aligned_cols=167 Identities=20% Similarity=0.126 Sum_probs=84.6
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCC----CCc---ceeEeCCCCCccccceeeccceeecCCc---hHHH-H-HHHHHHHhh
Q 023073 85 AFVYHNFLSKEECEYLINLATPH----MRK---STVVDSDTGKSKDSRVRTSSGTFLARGR---DKII-R-DIEKRIADF 152 (287)
Q Consensus 85 i~vi~nfLs~eEC~~Li~~a~~~----~~~---s~v~~~~~g~~~~~~~Rts~~~~l~~~~---d~v~-~-~i~~Ri~~~ 152 (287)
.++++|+|+++||+.|.+..+.. ..+ ...... +... . ....++.... +.+. . .+...++++
T Consensus 6 yvvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (211)
T PF05721_consen 6 YVVIRNVLSPEEVERLREELDRLDDRALEPDQDVSDFFD--ESFF-G----DYTEQLAKSPNFYDLFLHPPRILDLVRAL 78 (211)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSCEEEES--TSCC-C----TCCCCGCCCHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHHHHHHHhhhhccccccccccc--cccc-c----ccccccccchhhHHHHhhHHHHHHHHHHh
Confidence 57899999999999999988753 111 111111 1000 0 0001111100 1111 2 456666666
Q ss_pred cCCCCC----CCcccE-EEEcC-CCCcc-ccCcCCcccccccCCCCceEEEEEEeccCCC-CCceeee-cCCCCCCCCCC
Q 023073 153 TFFPLE----NGEGLQ-VLHYE-AGQKY-EPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISAVP 223 (287)
Q Consensus 153 ~g~p~~----~~E~lq-v~rY~-~G~~y-~~H~D~~~~~~~~~~~~~R~~T~llYLND~~-eGGeT~F-p~~~~~~~~~~ 223 (287)
.|.... ....++ +.+-. +|... .||.|...-.. ....+.+|+.++|.|+. +.|.+.+ |..... ...+
T Consensus 79 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~---~~~~~~~~~wi~L~d~~~~~G~~~v~pGSH~~-~~~~ 154 (211)
T PF05721_consen 79 LGSDVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHT---DPPENQLTVWIALDDITPENGPLEVVPGSHKW-GVEP 154 (211)
T ss_dssp HTSSEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTE---ESSSCEEEEEEESS-BBTTCTCEEEETTGCCS-CCEE
T ss_pred hCCcchhhhhhHHHHHhhhhccccCCCCCCCCCCCccccc---CCccceEEEEEeeccCCcccCceEeecCCcCC-Cccc
Confidence 665432 112221 23333 46665 99999754210 11578999999999984 4555655 433221 1000
Q ss_pred -cc-----ccc-------cccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 224 -WW-----NEL-------SECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 224 -~~-----~~~-------~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
.+ ... .......+.+..++|++|||. ..++|++-|..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~---------~~~~H~s~~N~s~ 206 (211)
T PF05721_consen 155 HEERFPEEDFPEEDDEESDEDEDEWVPVPMKAGDVLFFH---------SRLIHGSGPNTSD 206 (211)
T ss_dssp ECCCCCCCCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEE---------TTSEEEEE-B-SS
T ss_pred ccccccccccccccccccccccCceEEeecCCCeEEEEc---------CCccccCCCCCCc
Confidence 00 000 011234678999999999996 5899999997654
No 17
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=97.76 E-value=9.1e-05 Score=57.87 Aligned_cols=91 Identities=24% Similarity=0.303 Sum_probs=48.5
Q ss_pred EEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCC-Cc-cccccccCCcCeEEecCCc
Q 023073 166 LHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAV-PW-WNELSECGKTGLSIKPKMG 243 (287)
Q Consensus 166 ~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~-~~-~~~~~~c~~~~l~V~Pk~G 243 (287)
..|..|++-.+|.= .+..++.++||+.+++.|.+.|.+........ +. +.+..........++|+.|
T Consensus 5 ni~~~g~~~~~H~H-----------~~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G 73 (101)
T PF13759_consen 5 NIYRKGGYNEPHNH-----------PNSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEG 73 (101)
T ss_dssp EEE-TT--EEEE-------------TT-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TT
T ss_pred EEeCCCCccCceEC-----------CCcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCCC
Confidence 45678888778742 23479999999998888999998654332211 11 1111112234678999999
Q ss_pred eEEEEecCCCCCCCCCCCccccCCcccc-cEEEE
Q 023073 244 DALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSS 276 (287)
Q Consensus 244 ~alvF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~ 276 (287)
++|||++ .+.|++.|-... .|.++
T Consensus 74 ~lvlFPs---------~l~H~v~p~~~~~~Risi 98 (101)
T PF13759_consen 74 DLVLFPS---------WLWHGVPPNNSDEERISI 98 (101)
T ss_dssp EEEEEET---------TSEEEE----SSS-EEEE
T ss_pred EEEEeCC---------CCEEeccCcCCCCCEEEE
Confidence 9999996 899999999875 56655
No 18
>KOG3844 consensus Predicted component of NuA3 histone acetyltransferase complex [Chromatin structure and dynamics]
Probab=97.68 E-value=0.00043 Score=65.98 Aligned_cols=175 Identities=17% Similarity=0.222 Sum_probs=104.1
Q ss_pred cCCCE-EEEcCCCCHHHHHHHHHHhcCC--CCcceeEeCCCCCccccceeeccceeecC---CchHHHHHHHHHHHhhcC
Q 023073 81 WEPRA-FVYHNFLSKEECEYLINLATPH--MRKSTVVDSDTGKSKDSRVRTSSGTFLAR---GRDKIIRDIEKRIADFTF 154 (287)
Q Consensus 81 ~~P~i-~vi~nfLs~eEC~~Li~~a~~~--~~~s~v~~~~~g~~~~~~~Rts~~~~l~~---~~d~v~~~i~~Ri~~~~g 154 (287)
..|+- +++++|+++...+.+....+.. +.+-. .|-. .-.+..+.++-++.-.+. -.+.+.......+.+.+|
T Consensus 33 ngPf~h~~i~~~vnd~~l~~vrkei~~~~~f~~k~-tDly-r~~QtgdL~nl~~le~p~lf~~r~~Lyke~r~~~q~vtg 110 (476)
T KOG3844|consen 33 NGPFNHFIIRDFVNDSLLRVVRKEIHGSIHFTEKE-TDLY-RVLQTGDLANLEGLEFPALFSFRDSLYKEARGEIQDVTG 110 (476)
T ss_pred cCCCcceeeeccCCHHHHHHHHHHHhhccchhhhc-chhh-heeccccccccccccchhHHHHHHHHHHHHHHHHHhccC
Confidence 34544 6799999988887777555432 22110 0000 000011122222111100 012233344444555664
Q ss_pred CCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCC----CCceeeecCCC-CCCCCCCcccccc
Q 023073 155 FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE----EGGETVFPNAQ-GNISAVPWWNELS 229 (287)
Q Consensus 155 ~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~----eGGeT~Fp~~~-~~~~~~~~~~~~~ 229 (287)
--...--++-+..|..|.+--.|-|-. +.|.+++++||-|.. -||++..+... .....
T Consensus 111 ~~s~sk~Dms~s~Y~kgd~LL~HDD~i---------etRriaFilYL~~~Dwds~~GG~L~Lf~~d~~~~P~-------- 173 (476)
T KOG3844|consen 111 GLSTSKIDMSGSYYRKGDHLLCHDDVI---------ETRRIAFILYLVDPDWDSEYGGELRLFPDDCPSQPK-------- 173 (476)
T ss_pred ccccceeeeceeeeeccceeccccccc---------cceEEEEEEEecCcccccccCceeEecccccccCcc--------
Confidence 322222367889999999999997643 568999999999865 38888665432 21110
Q ss_pred ccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCccccc-EEEEEeeeeecc
Q 023073 230 ECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN-KWSSTKWIRVNE 284 (287)
Q Consensus 230 ~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~-K~i~~~W~~~~~ 284 (287)
.--.++.|+-...++|.- -+-+.|.+.-|.+.+ |.++++|+|.+.
T Consensus 174 ---s~~asl~P~~Nql~fFeV-------sp~SFH~V~Ev~sde~RlSIsGWfH~p~ 219 (476)
T KOG3844|consen 174 ---SVAASLEPQWNQLVFFEV-------SPISFHDVEEVLSDEPRLSISGWFHFPQ 219 (476)
T ss_pred ---chhhccCcccceEEEEEe-------cccchhhHHHHhccCcceeEeeeecCCc
Confidence 112458899999999974 378999999999875 599999999764
No 19
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=97.61 E-value=0.00026 Score=59.99 Aligned_cols=102 Identities=22% Similarity=0.287 Sum_probs=73.1
Q ss_pred ccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCC---CCCceeeecCCCCCCCCCCccccccccCCcCeEE
Q 023073 162 GLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV---EEGGETVFPNAQGNISAVPWWNELSECGKTGLSI 238 (287)
Q Consensus 162 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~---~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V 238 (287)
-..+++|++|++=..|.|..-+. . =-+-+++-||++ ++|||.++-.-..+.. .....+
T Consensus 63 tplllrY~~gdyn~LHqdlyGe~---v----FPlQvv~lLs~Pg~DftGGEFVltEQrPR~Q------------SR~~V~ 123 (173)
T PF09859_consen 63 TPLLLRYGPGDYNCLHQDLYGEH---V----FPLQVVILLSEPGEDFTGGEFVLTEQRPRMQ------------SRAMVL 123 (173)
T ss_pred chhhheeCCCCccccccCCCCCc---c----cCeEEEEEcCCCCCcccCceEEEEEecCCcc------------CccccC
Confidence 47789999999999999965321 0 014577789985 5899999965433221 146778
Q ss_pred ecCCceEEEEec-CCCC----CCCCCCCccccCCcccccEEEEEeeeee
Q 023073 239 KPKMGDALLFWS-MKPD----ASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 239 ~Pk~G~alvF~n-~~~~----g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
.+.+|+|+||.. .+|- |----.+.|++.+|.+|+++.+-.=||.
T Consensus 124 ~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgliFHD 172 (173)
T PF09859_consen 124 PLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGLIFHD 172 (173)
T ss_pred CcCCCCEEEEecCCCCcCCCccceecccccccccccccceEEEEEEeec
Confidence 999999999973 3332 2222367999999999999998776653
No 20
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=97.28 E-value=0.017 Score=53.73 Aligned_cols=177 Identities=15% Similarity=0.151 Sum_probs=93.4
Q ss_pred CEEEEcCCCCHHHHHHHHHHhcCCCC-cceeEeCCCCCccccceeeccceeecCCchHHH------HHHHHHHHhhcCCC
Q 023073 84 RAFVYHNFLSKEECEYLINLATPHMR-KSTVVDSDTGKSKDSRVRTSSGTFLARGRDKII------RDIEKRIADFTFFP 156 (287)
Q Consensus 84 ~i~vi~nfLs~eEC~~Li~~a~~~~~-~s~v~~~~~g~~~~~~~Rts~~~~l~~~~d~v~------~~i~~Ri~~~~g~p 156 (287)
..++++++||++|++.|.+.++..+. ++.......+ ...|.+. +... .++.+ .+|...+++++|-+
T Consensus 15 Gyv~~~~~~s~eei~~L~~~~~~~l~~~~~~~~~~~~----~~~~~~~--~~~~-~~~~~~~l~~~~~l~~~~~~llG~~ 87 (288)
T TIGR01762 15 GFIGPFTLYSPEEMKETWKRIRLRLLDRSAAPYQDLG----GTNIANY--DRHL-DDDFLASHICRPEICHRVESILGPN 87 (288)
T ss_pred CEEeCcCCCCHHHHHHHHHHHHHHhhccccccccCCC----CceeEee--eecc-cCHHHHHHhcCHHHHHHHHHHhCCc
Confidence 45689999999999999998864321 1110000001 1122211 1111 12222 24455566666644
Q ss_pred CCCCcccEEEEcCCCCccccCcCCcccccc--------cCCCCceEEEEEEeccCCC-CCceeee-cCCCCCCC---CC-
Q 023073 157 LENGEGLQVLHYEAGQKYEPHFDYFMDEFN--------TKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNIS---AV- 222 (287)
Q Consensus 157 ~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~--------~~~~~~R~~T~llYLND~~-eGGeT~F-p~~~~~~~---~~- 222 (287)
+-....--+.+...++.+.||.|...-... ......+.+|+.+.|.|+. +-|.+.| |....... ..
T Consensus 88 v~l~~~~~~~K~pg~~~~~wHQD~~y~~~~~~~~~~~p~~~~~~~~vt~wiaLdd~t~eNG~L~viPGSH~~~~~~~~~~ 167 (288)
T TIGR01762 88 VLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQLVWPENEEFGGTITVWTAFTDATIENGCMQFIPGTHNSMNYDETRR 167 (288)
T ss_pred EEeeeceeeeeCCCCCCCCCCccCcccccCCcccccccccCCCCCeEEEEEEcccCCcccCCEEEECCCCCCCCCCcccc
Confidence 322222234455555558999995431110 0112347899999999975 4455555 44332100 00
Q ss_pred ----C----------c--------cccc------cccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCccccc--
Q 023073 223 ----P----------W--------WNEL------SECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN-- 272 (287)
Q Consensus 223 ----~----------~--------~~~~------~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~-- 272 (287)
| . +.++ ..+....+.+.-++|++++|. ..++|++.|-.+..
T Consensus 168 ~~~~p~~~~~~~~g~~~~~~~~~~~~~l~~d~~~~~~~~~~v~~~lkaGd~~~f~---------~~t~HgS~~N~S~~~~ 238 (288)
T TIGR01762 168 MTFEPDANNSVVKGGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPNSGESQM 238 (288)
T ss_pred cccCccccccccccccccccccccchhhcccccCCccccceeeeeeCCceEEEEC---------CCceecCCCCCCCCce
Confidence 0 0 0000 001123467777999999995 58999999998853
Q ss_pred EEEE
Q 023073 273 KWSS 276 (287)
Q Consensus 273 K~i~ 276 (287)
|+++
T Consensus 239 R~~~ 242 (288)
T TIGR01762 239 RMGF 242 (288)
T ss_pred EEEE
Confidence 5554
No 21
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=97.23 E-value=0.0019 Score=57.02 Aligned_cols=96 Identities=19% Similarity=0.145 Sum_probs=63.0
Q ss_pred ccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCC--CCCCccccccccCCcCeEEe
Q 023073 162 GLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI--SAVPWWNELSECGKTGLSIK 239 (287)
Q Consensus 162 ~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~--~~~~~~~~~~~c~~~~l~V~ 239 (287)
..=+.++.+|++-..|+= .+..+|-++||+.+..+|...|.+..... ...+.-..........+.|+
T Consensus 97 ~~W~ni~~~Gg~h~~H~H-----------p~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~ 165 (201)
T TIGR02466 97 KAWVNILPQGGTHSPHLH-----------PGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVP 165 (201)
T ss_pred eEeEEEcCCCCccCceEC-----------CCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEEC
Confidence 344467888998777742 23589999999998888999886532211 00000000001112356799
Q ss_pred cCCceEEEEecCCCCCCCCCCCccccCCccc-ccEEEEE
Q 023073 240 PKMGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSST 277 (287)
Q Consensus 240 Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~ 277 (287)
|+.|++|+|++ .++|++.|-.. ++|.++.
T Consensus 166 P~~G~lvlFPS---------~L~H~v~p~~~~~~RISiS 195 (201)
T TIGR02466 166 PQEGRVLLFES---------WLRHEVPPNESEEERISVS 195 (201)
T ss_pred CCCCeEEEECC---------CCceecCCCCCCCCEEEEE
Confidence 99999999997 79999999975 4676653
No 22
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=96.70 E-value=0.011 Score=50.76 Aligned_cols=153 Identities=22% Similarity=0.196 Sum_probs=76.1
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCC--CCcceeEeCCCCCccc---------------cceeecc-----ceeecCCchHHH
Q 023073 85 AFVYHNFLSKEECEYLINLATPH--MRKSTVVDSDTGKSKD---------------SRVRTSS-----GTFLARGRDKII 142 (287)
Q Consensus 85 i~vi~nfLs~eEC~~Li~~a~~~--~~~s~v~~~~~g~~~~---------------~~~Rts~-----~~~l~~~~d~v~ 142 (287)
+++++||||++|.+.|++..... +....... ++... ..++-+. ..-++. -.+.+
T Consensus 2 ~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~-~p~~l 77 (194)
T PF13532_consen 2 LYYIPNFLSEEEAAELLNELRESAPFRQPTYPM---GKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPP-FPEWL 77 (194)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCC---CCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSC-CHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcC---CCEEccceecceeeEEECCCCCeEcCCccccCCCCCCC-ccHHH
Confidence 67999999999999999998632 11111100 11000 0011110 000110 12345
Q ss_pred HHHHHHHHhhcC-CCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCC
Q 023073 143 RDIEKRIADFTF-FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISA 221 (287)
Q Consensus 143 ~~i~~Ri~~~~g-~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~ 221 (287)
..+.+++....+ .+........|..|..|+.-.+|.|.... ..+..++|+-+ |+..+|-......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~-----~~~~~I~slSL-------G~~~~~~f~~~~~-- 143 (194)
T PF13532_consen 78 SRLLERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEY-----GFGPPIASLSL-------GSSRVFRFRNKSD-- 143 (194)
T ss_dssp HHHHHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC------CCSEEEEEEE-------ES-EEEEEEECGG--
T ss_pred HHHHHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccc-----cCCCcEEEEEE-------ccCceEEEeeccC--
Confidence 555555554433 22222346788899999999999997521 23567777776 3444443221100
Q ss_pred CCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 222 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 222 ~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
.+.-+.|.-..|+++++.. ...... |++.|+..+
T Consensus 144 ----------~~~~~~~~L~~gsl~vm~g-----~~r~~~-H~I~~~~~~ 177 (194)
T PF13532_consen 144 ----------DDEPIEVPLPPGSLLVMSG-----EARYDW-HGIPPVKKD 177 (194)
T ss_dssp ----------TS-EEEEEE-TTEEEEEET-----THHHHE-EEE-S-SCE
T ss_pred ----------CCccEEEEcCCCCEEEeCh-----HHhhhe-eEcccccCC
Confidence 1235788999999999963 222345 999999874
No 23
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=96.01 E-value=0.028 Score=48.31 Aligned_cols=79 Identities=25% Similarity=0.296 Sum_probs=58.5
Q ss_pred ccccCcCCcccccccCCCCceEEEEEEeccC-CCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecC
Q 023073 173 KYEPHFDYFMDEFNTKNGGQRMATVLMYLSD-VEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSM 251 (287)
Q Consensus 173 ~y~~H~D~~~~~~~~~~~~~R~~T~llYLND-~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~ 251 (287)
....|.|... .+--.++++-|.- .++||..++|..+.+ -.|++|.|..|++|+|-.
T Consensus 86 ~t~~HrD~~~--------~~~~~~~~~t~~~gd~~~g~l~lp~~~~~--------------~~g~~~~~~~GtVl~~~~- 142 (171)
T PF12851_consen 86 CTHSHRDTHN--------MPNGYDVLCTLGRGDYDGGRLELPGLDPN--------------ILGVAFAYQPGTVLIFCA- 142 (171)
T ss_pred CccceecCCC--------CCCCeEEEEecCCccccCceEeccccccc--------------cCCEEEecCCCcEEEEcc-
Confidence 4467777542 2223666666653 388999999974322 248999999999999964
Q ss_pred CCCCCCCCCCccccCCccc-----ccEEEEEeeee
Q 023073 252 KPDASLDPSSLHGGCPVIK-----GNKWSSTKWIR 281 (287)
Q Consensus 252 ~~~g~~D~~~lH~g~PV~~-----G~K~i~~~W~~ 281 (287)
....|+..||.. |+|+.+.-+.|
T Consensus 143 -------~~~~Hgvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 143 -------KRELHGVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred -------cceeeecCcccCCCCCCCeEEEEEEEeE
Confidence 468999999997 99999987765
No 24
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=95.88 E-value=0.35 Score=43.09 Aligned_cols=159 Identities=19% Similarity=0.191 Sum_probs=91.1
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHHhcCCCCcceeEeCCC-CCccccceeec-cc--eeecC-------------C-----c
Q 023073 81 WEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDT-GKSKDSRVRTS-SG--TFLAR-------------G-----R 138 (287)
Q Consensus 81 ~~P~i~vi~nfLs~eEC~~Li~~a~~~~~~s~v~~~~~-g~~~~~~~Rts-~~--~~l~~-------------~-----~ 138 (287)
..|.++++++|. .+|.++|++..+.....+......+ |+ ...++|.. -+ .|+.+ . -
T Consensus 16 ~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~~~gg-~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~~ 93 (213)
T PRK15401 16 LAPGAVLLRGFA-LAAAEALLAAIEAVAAQAPFRHMVTPGG-YTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPAM 93 (213)
T ss_pred cCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCCccceecCCC-CcceeEEeccccceEecCCCCcccCCcCCCCCCCCCCc
Confidence 578899999996 8888888877654111111100001 11 11122211 11 12110 0 1
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCC
Q 023073 139 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGN 218 (287)
Q Consensus 139 d~v~~~i~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~ 218 (287)
.+.+..|.++++...+.+....+..-|..|.+|+.-++|.|....+ ...-++++-+ |.+-.|......
T Consensus 94 P~~l~~L~~~~~~~~~~~~~~p~a~LvN~Y~~G~~mg~H~D~~E~~-----~~~pI~SvSL-------G~~~~F~~~~~~ 161 (213)
T PRK15401 94 PASFLALAQRAAAAAGFPGFQPDACLINRYAPGAKLSLHQDKDERD-----FRAPIVSVSL-------GLPAVFQFGGLK 161 (213)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCCEEEEEeccCcCccccccCCCccc-----CCCCEEEEeC-------CCCeEEEecccC
Confidence 2357788888887777543344578999999999999999963211 1233555543 445555432110
Q ss_pred CCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 219 ISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 219 ~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
. .+...+|.-.-|++|++- |.. ...+|++-++..|
T Consensus 162 ~------------~~~~~~l~L~~Gdllvm~-----G~s-r~~~HgVp~~~~~ 196 (213)
T PRK15401 162 R------------SDPLQRILLEHGDVVVWG-----GPS-RLRYHGILPLKAG 196 (213)
T ss_pred C------------CCceEEEEeCCCCEEEEC-----chH-hheeccCCcCCCC
Confidence 0 112468999999999994 222 3467999888765
No 25
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.93 E-value=0.12 Score=44.53 Aligned_cols=95 Identities=17% Similarity=0.208 Sum_probs=57.9
Q ss_pred EecCCCEEEEcCCCCHHHHHHHHHHhcCCCCcce-eE-----eCCCCCccccceeeccceeecCCchHHHHHHHHHHHhh
Q 023073 79 ISWEPRAFVYHNFLSKEECEYLINLATPHMRKST-VV-----DSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADF 152 (287)
Q Consensus 79 ls~~P~i~vi~nfLs~eEC~~Li~~a~~~~~~s~-v~-----~~~~g~~~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~ 152 (287)
+...|.+++|+||+++||-..+.+-.+..-++-. +. .+- |+-. -....++..-.+-.+.+...|.+.
T Consensus 8 V~~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRLqNy-GGvv------h~~glipeelP~wLq~~v~kinnl 80 (224)
T KOG3200|consen 8 VKSAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRLQNY-GGVV------HKTGLIPEELPPWLQYYVDKINNL 80 (224)
T ss_pred ecccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhhhhc-CCcc------ccCCcCccccCHHHHHHHHHhhcc
Confidence 5568899999999999999999888874321110 00 000 1100 001123322244566666777654
Q ss_pred cCCCCCCCcccEEEEcCCCCccccCcCCc
Q 023073 153 TFFPLENGEGLQVLHYEAGQKYEPHFDYF 181 (287)
Q Consensus 153 ~g~p~~~~E~lqv~rY~~G~~y~~H~D~~ 181 (287)
.-++. ......|..|.+||.--||.|+.
T Consensus 81 glF~s-~~NHVLVNeY~pgqGImPHtDGP 108 (224)
T KOG3200|consen 81 GLFKS-PANHVLVNEYLPGQGIMPHTDGP 108 (224)
T ss_pred cccCC-CcceeEeecccCCCCcCcCCCCC
Confidence 32332 23367888999999999999974
No 26
>PHA02923 hypothetical protein; Provisional
Probab=94.92 E-value=0.18 Score=46.79 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHhhcCCC--CCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCC
Q 023073 139 DKIIRDIEKRIADFTFFP--LENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQ 216 (287)
Q Consensus 139 d~v~~~i~~Ri~~~~g~p--~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~ 216 (287)
+++..+|++.|-+-+-.. +.....+.+..|++|.+ .|. .+ ...-..+++||+.+++||++.|+..+
T Consensus 43 ~di~~~ir~liy~elk~v~~V~V~n~iT~ikYekgd~--~~l---------~~-~~~~y~LvLyL~~p~~GGt~i~~~~~ 110 (315)
T PHA02923 43 IDISECIREILYKQFKNVRNIEVSSTISFIKYNPFND--TTL---------TD-DNMGYYLVIYLNRPKSGKTLIYPTPE 110 (315)
T ss_pred hHHHHHHHHHHHHhccCcceEEEeceEEEEEEcCCCc--cee---------ec-CceEEEEEEEEeccCCCCeEEEecCC
Confidence 567788877765533221 22234689999999995 111 11 23778899999999999999998753
Q ss_pred CCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEe
Q 023073 217 GNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTK 278 (287)
Q Consensus 217 ~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 278 (287)
. .|. .+-+ ++| |....|+..-|.+|.|.++-.
T Consensus 111 t-------------------~i~-~~~D-vLF---------dKsl~h~s~~V~~G~K~VAl~ 142 (315)
T PHA02923 111 T-------------------VIT-SSED-IMF---------SKSLNFRFENVKRGYKLVMCS 142 (315)
T ss_pred C-------------------eEe-eccc-eee---------ecccccceeeeecCcEEEEEE
Confidence 1 111 1223 566 468999999999999998766
No 27
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.99 E-value=0.47 Score=41.28 Aligned_cols=103 Identities=18% Similarity=0.213 Sum_probs=70.8
Q ss_pred cccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCC---CCCceeeecCCCCCCCCCCccccccccCCcCeE
Q 023073 161 EGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV---EEGGETVFPNAQGNISAVPWWNELSECGKTGLS 237 (287)
Q Consensus 161 E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~---~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~ 237 (287)
.-..++.|.+|++--.|.|-.-+- -=-+-+.|-|+|+ +.|||.+.-.-..... ..+-.
T Consensus 124 pTpLlLqYgpgD~NcLHQDLYGel-------vFPLQvailLsePg~DfTGGEF~lvEQRPR~Q------------Sr~~v 184 (236)
T COG3826 124 PTPLLLQYGPGDYNCLHQDLYGEL-------VFPLQVAILLSEPGTDFTGGEFVLVEQRPRMQ------------SRPTV 184 (236)
T ss_pred CCceeEEecCCccchhhhhhhhce-------eeeeeEEEeccCCCCcccCceEEEEecccccc------------cCCce
Confidence 356789999999999999964221 0124466778986 4899988854433221 13567
Q ss_pred EecCCceEEEEecC-CC----CCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 238 IKPKMGDALLFWSM-KP----DASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 238 V~Pk~G~alvF~n~-~~----~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
|.-.+|++++|-.. .| -|.--....|++.-+.+|+++.+-.=||.
T Consensus 185 vpLrqG~g~vFavr~RPv~gtrG~~r~~lRHGvS~lRSG~R~t~GiIFHD 234 (236)
T COG3826 185 VPLRQGDGVVFAVRDRPVQGTRGWYRVPLRHGVSRLRSGERHTVGIIFHD 234 (236)
T ss_pred eeccCCceEEEEeecCcccCccCccccchhcchhhhhcccceeeEEEeec
Confidence 88889999999632 11 12223456899999999999998776664
No 28
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=90.29 E-value=3.3 Score=39.42 Aligned_cols=87 Identities=20% Similarity=0.216 Sum_probs=54.5
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+-. ...+|.|+. .+|+|+- ++ .||=-+..+ ...
T Consensus 201 ~lRl~~YPp~~~~~~~~g~~aHTD~g------------~lTlL~Q-d~--v~GLQV~~~------------------g~W 247 (341)
T PLN02984 201 VIRVYRYPQCSNEAEAPGMEVHTDSS------------VISILNQ-DE--VGGLEVMKD------------------GEW 247 (341)
T ss_pred eEEEEeCCCCCCcccccCccCccCCC------------ceEEEEe-CC--CCCeeEeeC------------------Cce
Confidence 59999998632 245788864 5777754 33 355444321 247
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCcccc-CCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGG-CPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g-~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|.+||--- ...||. =..+.|++ .+-....||++.-+++-
T Consensus 248 v~V~p~pgalVVNiGD~Le~wTNg~-~kSt~HRVv~~~~~~~R~Sia~F~~P 298 (341)
T PLN02984 248 FNVKPIANTLVVNLGDMMQVISDDE-YKSVLHRVGKRNKKKERYSICYFVFP 298 (341)
T ss_pred EECCCCCCeEEEECChhhhhhcCCe-eeCCCCccccCCCCCCeEEEEEEecC
Confidence 899999999888631 122332 24689999 44434578988776643
No 29
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=89.25 E-value=3.9 Score=37.43 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhhcCCCCC--------CCcccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCC
Q 023073 140 KIIRDIEKRIADFTFFPLE--------NGEGLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE 205 (287)
Q Consensus 140 ~v~~~i~~Ri~~~~g~p~~--------~~E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~ 205 (287)
.+..+|.+-++..+|++.+ ....+++.+|.+- -...+|.|.. .+|+|+. +++
T Consensus 87 ~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~q-d~v- 152 (262)
T PLN03001 87 ALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFG------------AITLLIQ-DDV- 152 (262)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCC------------eeEEEEe-CCC-
Confidence 4555666666666676621 1234788999762 1246788853 5777754 333
Q ss_pred CCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 206 EGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 206 eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
||==+... +..+.|+|..|..||--- ...||. -..+.|++.-....+||++.-+++
T Consensus 153 -~GLqV~~~------------------g~Wi~V~p~p~a~vVNiGD~l~~~tng~-~~S~~HRVv~~~~~~R~Sia~F~~ 212 (262)
T PLN03001 153 -EGLQLLKD------------------AEWLMVPPISDAILIIIADQTEIITNGN-YKSAQHRAIANANKARLSVATFHD 212 (262)
T ss_pred -CceEEeeC------------------CeEEECCCCCCcEEEEccHHHHHHhCCc-cccccceEEcCCCCCEEEEEEEEc
Confidence 55333321 147899999998777521 122222 246899998655567999887765
No 30
>PLN02485 oxidoreductase
Probab=87.92 E-value=4.9 Score=37.83 Aligned_cols=109 Identities=16% Similarity=0.036 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhcCCCCC------CC---cccEEEEcCCCC----------ccccCcCCcccccccCCCCceEEEEEEecc
Q 023073 142 IRDIEKRIADFTFFPLE------NG---EGLQVLHYEAGQ----------KYEPHFDYFMDEFNTKNGGQRMATVLMYLS 202 (287)
Q Consensus 142 ~~~i~~Ri~~~~g~p~~------~~---E~lqv~rY~~G~----------~y~~H~D~~~~~~~~~~~~~R~~T~llYLN 202 (287)
...|.+.++..+|++.+ .. ..+++.+|.+-. .-.+|+|+. .+|+|. .
T Consensus 156 ~~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g------------~lTlL~--q 221 (329)
T PLN02485 156 SRKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYG------------LLTLVN--Q 221 (329)
T ss_pred HHHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCC------------eEEEEe--c
Confidence 33444445555566521 11 248899998632 135687753 467663 4
Q ss_pred CCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEe
Q 023073 203 DVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTK 278 (287)
Q Consensus 203 D~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 278 (287)
|...||-=+.... +..+.|+|..|.+||--- ...||. =..+.|++.+....+||++.-
T Consensus 222 d~~~~GLqV~~~~-----------------g~Wi~V~p~pg~~vVNiGD~L~~~TnG~-~~St~HRVv~~~~~~R~Si~~ 283 (329)
T PLN02485 222 DDDITALQVRNLS-----------------GEWIWAIPIPGTFVCNIGDMLKIWSNGV-YQSTLHRVINNSPKYRVCVAF 283 (329)
T ss_pred cCCCCeeeEEcCC-----------------CcEEECCCCCCcEEEEhHHHHHHHHCCE-eeCCCceecCCCCCCeEEEEE
Confidence 4344564444321 247899999998887521 122221 246899998665557999887
Q ss_pred eeee
Q 023073 279 WIRV 282 (287)
Q Consensus 279 W~~~ 282 (287)
+++-
T Consensus 284 F~~p 287 (329)
T PLN02485 284 FYET 287 (329)
T ss_pred EecC
Confidence 7653
No 31
>PF06822 DUF1235: Protein of unknown function (DUF1235); InterPro: IPR009641 This family contains a number of poxviral proteins, which include Vaccinia virus, A37, the function of which is unknown.
Probab=87.76 E-value=4.2 Score=37.34 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCcccEEEEcCCCCcccc-CcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCC
Q 023073 139 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEP-HFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQG 217 (287)
Q Consensus 139 d~v~~~i~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~-H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~ 217 (287)
..++..|++.+.+ +.-..+.+++..|+.||-++. +.+ .....++++-|+.+..||..++.....
T Consensus 32 ~~i~~EI~kh~~e----~V~~~~~i~i~~f~~~~~~~~~~~~-----------~~~~sr~lvCi~sakkGG~iii~~~~~ 96 (266)
T PF06822_consen 32 KIILSEIEKHINE----PVYVNNLISIQVFDKGQCYKSRIQD-----------NSSLSRILVCIQSAKKGGCIIIRNTIS 96 (266)
T ss_pred HHHHHHHHHhcCC----eEEecCcEEEEEEeCCCceeccccC-----------CCcceeEEEEeeccccCCeEEEeeccc
Confidence 4566777776643 333456899999999998743 322 236788999999999999998876533
Q ss_pred CCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeeecc
Q 023073 218 NISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNE 284 (287)
Q Consensus 218 ~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~ 284 (287)
+ ..-.++|..|.||+-. |.....+.+|.+|.-..+..=+..+.
T Consensus 97 ~---------------~kkii~~~~~~aVlLs---------pl~~y~Vs~V~~G~~i~i~l~idIPS 139 (266)
T PF06822_consen 97 N---------------DKKIITPNQNMAVLLS---------PLADYDVSNVTKGSMIIIVLDIDIPS 139 (266)
T ss_pred C---------------CceEEecCCCeEEEec---------chhheEEEEecCCcEEEEEEEeccCc
Confidence 2 3578999999999985 57888899999998777665554443
No 32
>PLN02904 oxidoreductase
Probab=87.46 E-value=6.7 Score=37.54 Aligned_cols=87 Identities=16% Similarity=0.118 Sum_probs=54.5
Q ss_pred ccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+. -.-.+|.|+. .+|+|+ .|+ ||==+.... +..
T Consensus 209 ~lrl~~YPp~p~~~~~~g~~~HtD~g------------~lTlL~--qd~--~GLQV~~~~-----------------g~W 255 (357)
T PLN02904 209 VMAVNCYPACPEPEIALGMPPHSDFG------------SLTILL--QSS--QGLQIMDCN-----------------KNW 255 (357)
T ss_pred EEEeeecCCCCCcccccCCcCccCCC------------ceEEEe--cCC--CeeeEEeCC-----------------CCE
Confidence 5888999863 1245788864 578885 453 453333321 247
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|..||--- ...||. -..++|++......+||++.-++.-
T Consensus 256 i~V~p~pgalVVNiGD~Le~~TNG~-~kSt~HRVv~~~~~~R~Si~~F~~p 305 (357)
T PLN02904 256 VCVPYIEGALIVQLGDQVEVMSNGI-YKSVVHRVTVNKDYKRLSFASLHSL 305 (357)
T ss_pred EECCCCCCeEEEEccHHHHHHhCCe-eeccCCcccCCCCCCEEEEEEeecC
Confidence 899999999887531 112221 2578999965445679998877653
No 33
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=87.27 E-value=5.4 Score=38.04 Aligned_cols=88 Identities=15% Similarity=0.090 Sum_probs=55.3
Q ss_pred ccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+- -...+|+|.. .+|+| +.|...||==+..+ +..
T Consensus 204 ~lRl~~YPp~~~~~~~~g~~~HTD~g------------~lTlL--~qd~~v~GLQV~~~------------------g~W 251 (348)
T PLN00417 204 DTRFNMYPPCPRPDKVIGVKPHADGS------------AFTLL--LPDKDVEGLQFLKD------------------GKW 251 (348)
T ss_pred eeeeeecCCCCCcccccCCcCccCCC------------ceEEE--EecCCCCceeEeEC------------------CeE
Confidence 4899999752 1245788864 46766 34433455444422 147
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|.+||--- ...|| .-..++|++.+...++||++.-+++-
T Consensus 252 i~V~p~pg~lVVNiGD~Le~~Tng-~~kSt~HRVv~~~~~~R~Si~fF~~P 301 (348)
T PLN00417 252 YKAPIVPDTILINVGDQMEIMSNG-IYKSPVHRVVTNREKERISVATFCIP 301 (348)
T ss_pred EECCCCCCcEEEEcChHHHHHhCC-eecccceEEecCCCCCEEEEEEEecC
Confidence 889999999887521 11222 23578999976656789998877653
No 34
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=85.68 E-value=9.8 Score=36.03 Aligned_cols=106 Identities=15% Similarity=0.189 Sum_probs=62.2
Q ss_pred HHHHHHHhhcCCCCC--------CCcccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCce
Q 023073 144 DIEKRIADFTFFPLE--------NGEGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGE 209 (287)
Q Consensus 144 ~i~~Ri~~~~g~p~~--------~~E~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGe 209 (287)
+|.+-++..+|++.. ....+++.+|.+-. ...+|+|.. .+|+|+- |...||=
T Consensus 165 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~q--d~~v~GL 230 (337)
T PLN02639 165 RLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPN------------ALTILLQ--DQQVAGL 230 (337)
T ss_pred HHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCC------------ceEEEEe--cCCcCce
Confidence 344444444566521 22358889998631 245787753 5677643 4334554
Q ss_pred eeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 210 TVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 210 T~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
=++.+ +..+.|+|..|.+||--- ...||. =..++|++-.....+||++.-+++-
T Consensus 231 QV~~~------------------g~Wi~V~p~pg~lVVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Sia~F~~p 288 (337)
T PLN02639 231 QVLKD------------------GKWVAVNPHPGAFVINIGDQLQALSNGR-YKSVWHRAVVNTDKERMSVASFLCP 288 (337)
T ss_pred EeecC------------------CeEEeccCCCCeEEEechhHHHHHhCCe-eeccCcccccCCCCCEEEEEEEecC
Confidence 44432 147899999999887421 112221 2468999954445679998877653
No 35
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=85.63 E-value=7.5 Score=37.24 Aligned_cols=89 Identities=17% Similarity=0.149 Sum_probs=54.7
Q ss_pred ccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+- -...+|.|+. .+|+|+- ++ .||==+.... ++..
T Consensus 196 ~lrl~~YP~~~~~~~~~G~~~HTD~g------------~lTlL~Q-d~--v~GLQV~~~~----------------~~~W 244 (358)
T PLN02515 196 KVVVNYYPKCPQPDLTLGLKRHTDPG------------TITLLLQ-DQ--VGGLQATRDG----------------GKTW 244 (358)
T ss_pred eEEEeecCCCCChhhccCCCCCCCCC------------eEEEEec-CC--CCceEEEECC----------------CCeE
Confidence 4788889862 1345788864 5777744 32 3554443321 1147
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|..||=-- ...||. -..++|++.....++||++.-+++-
T Consensus 245 i~Vpp~pgalVVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Si~~F~~P 294 (358)
T PLN02515 245 ITVQPVEGAFVVNLGDHGHYLSNGR-FKNADHQAVVNSNCSRLSIATFQNP 294 (358)
T ss_pred EECCCCCCeEEEEccHHHHHHhCCe-eeeecceEECCCCCCEEEEEEEecC
Confidence 899999998777421 122332 2578999865556689998877654
No 36
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=85.61 E-value=8 Score=36.44 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=55.5
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+-. ...+|.|.. .+|+| +.|...||==+..+ ...
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g------------~lTlL--~qd~~v~GLQV~~~------------------g~W 206 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAG------------GIILL--FQDDKVSGLQLLKD------------------GEW 206 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCC------------eEEEE--EecCCCCCcCcccC------------------CeE
Confidence 47899998621 245888864 56776 44433455434321 147
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|.+||--- ...||. -..+.|++.....++||++.-+++-
T Consensus 207 i~V~p~pg~lvVNiGD~l~~~Tng~-~kS~~HRVv~~~~~~R~Si~~F~~p 256 (321)
T PLN02299 207 VDVPPMRHSIVVNLGDQLEVITNGK-YKSVMHRVVAQTDGNRMSIASFYNP 256 (321)
T ss_pred EECCCCCCeEEEEeCHHHHHHhCCc-eecccceeecCCCCCEEEEEEEecC
Confidence 889999998887531 122332 2578999985556789998877653
No 37
>PLN02216 protein SRG1
Probab=85.20 E-value=7.1 Score=37.36 Aligned_cols=87 Identities=16% Similarity=0.190 Sum_probs=54.1
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+-. ...+|.|+. .+|+|+--++ .||==+... +..
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g------------~lTlL~q~~~--v~GLQV~~~------------------g~W 258 (357)
T PLN02216 211 SIRMNYYPPCPQPDQVIGLTPHSDAV------------GLTILLQVNE--VEGLQIKKD------------------GKW 258 (357)
T ss_pred eeEEeecCCCCCcccccCccCcccCc------------eEEEEEecCC--CCceeEEEC------------------CEE
Confidence 58889997621 245777753 4676644333 456445432 247
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
+.|+|..|..||--- ...||. -..++|++......+|+++.-++.
T Consensus 259 i~V~p~pgalvVNiGD~L~~~TNG~-~kS~~HRVv~~~~~~R~Si~~F~~ 307 (357)
T PLN02216 259 VSVKPLPNALVVNVGDILEIITNGT-YRSIEHRGVVNSEKERLSVATFHN 307 (357)
T ss_pred EECCCCCCeEEEEcchhhHhhcCCe-eeccCceeecCCCCCEEEEEEEec
Confidence 899999998887421 122232 247899986554567998877765
No 38
>PLN02276 gibberellin 20-oxidase
Probab=84.54 E-value=11 Score=36.10 Aligned_cols=87 Identities=22% Similarity=0.241 Sum_probs=55.8
Q ss_pred cccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCc
Q 023073 161 EGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 234 (287)
Q Consensus 161 E~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 234 (287)
.-+++.+|.+.. .-.+|+|+. .+|+|+- | ..||==++.+ +.
T Consensus 206 ~~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~Q--d-~v~GLQV~~~------------------g~ 252 (361)
T PLN02276 206 SIMRCNYYPPCQEPELTLGTGPHCDPT------------SLTILHQ--D-QVGGLQVFVD------------------NK 252 (361)
T ss_pred ceeeeEeCCCCCCcccccCCccccCCc------------eeEEEEe--c-CCCceEEEEC------------------CE
Confidence 358889997641 245787753 5777753 4 3456555532 24
Q ss_pred CeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 235 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
.+.|+|..|.+||--- ...||. -..++|++.......||++.-+++
T Consensus 253 Wi~V~p~pgalVVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Sia~F~~ 302 (361)
T PLN02276 253 WRSVRPRPGALVVNIGDTFMALSNGR-YKSCLHRAVVNSERERRSLAFFLC 302 (361)
T ss_pred EEEcCCCCCeEEEEcHHHHHHHhCCc-cccccceeecCCCCCEEEEEEEec
Confidence 7899999999888631 122222 357899986444567999887765
No 39
>PF14033 DUF4246: Protein of unknown function (DUF4246)
Probab=84.52 E-value=2.9 Score=41.94 Aligned_cols=101 Identities=16% Similarity=0.201 Sum_probs=62.6
Q ss_pred EcCCCCccccCcCCcccccccCCCCceEEEEEEeccCC-CCCceeeecCCCCC-C-------C--CCCccccc------c
Q 023073 167 HYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV-EEGGETVFPNAQGN-I-------S--AVPWWNEL------S 229 (287)
Q Consensus 167 rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~-~eGGeT~Fp~~~~~-~-------~--~~~~~~~~------~ 229 (287)
.|..| .||+++.. +.+-+||.|.|+... -....+.|...-.. . . ...++..+ .
T Consensus 359 ~Y~gg---~WHvEG~l-------NE~IvATalYyyd~eNIT~s~L~FR~~~~d~~~~~~~~~~q~~~~~~~~~~g~~~~~ 428 (501)
T PF14033_consen 359 EYPGG---SWHVEGQL-------NEHIVATALYYYDSENITESRLSFRQQTDDPDLDQELSYEQDDHEWLERVFGIEDGG 428 (501)
T ss_pred CCCCC---CccccCCc-------ccceeEEEEEEEecCccCCCceEeeeeccCccccccccccccchhHHHHhcCCCCCc
Confidence 45444 69998764 346789999998643 24456677544311 1 0 00111111 1
Q ss_pred ccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcc------cccEEEEEeeeeecccc
Q 023073 230 ECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI------KGNKWSSTKWIRVNEYK 286 (287)
Q Consensus 230 ~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~------~G~K~i~~~W~~~~~~~ 286 (287)
.|-+.-=+|.-+.|++|+|+| ...|.+.|.. .|.+-+++-|+-.+.++
T Consensus 429 ~~~q~~Gsv~~~~gr~i~fPN---------~~qhrv~~f~L~D~tkpGhrkil~lfLvDP~~~ 482 (501)
T PF14033_consen 429 PAVQELGSVETKEGRLIAFPN---------TLQHRVSPFELADPTKPGHRKILALFLVDPHIR 482 (501)
T ss_pred cceEEcCcEEccCCcEEeccc---------hhhhccCCccccCCCCCCcEEEEEEEecCCCCc
Confidence 222333468889999999999 5778888653 68888999888666554
No 40
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=84.10 E-value=10 Score=36.29 Aligned_cols=87 Identities=22% Similarity=0.272 Sum_probs=54.9
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+.. ...+|.|.. .+|+|+. ++ .||==++... +..
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g------------~lTiL~Q-d~--v~GLQV~~~~-----------------~~W 258 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDSS------------LLTILYQ-SN--TSGLQVFREG-----------------VGW 258 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCCC------------cEEEEec-CC--CCCceEECCC-----------------CEE
Confidence 57888998631 256788854 5787764 33 3565454431 147
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
+.|+|..|..||--- ...||. -..++|++..-...+|+++.-+++
T Consensus 259 i~V~p~pgalVVNiGD~lq~~SNg~-~kS~~HRVv~~~~~~R~Sia~F~~ 307 (358)
T PLN02254 259 VTVPPVPGSLVVNVGDLLHILSNGR-FPSVLHRAVVNKTRHRISVAYFYG 307 (358)
T ss_pred EEcccCCCCEEEEhHHHHHHHhCCe-eccccceeecCCCCCEEEEEEEec
Confidence 899999999888531 122232 357899995444457888877665
No 41
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=83.96 E-value=11 Score=35.80 Aligned_cols=88 Identities=18% Similarity=0.190 Sum_probs=55.4
Q ss_pred cccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCc
Q 023073 161 EGLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 234 (287)
Q Consensus 161 E~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 234 (287)
..+++.+|.+- -.-.+|.|+. .+|+|+- | ..||==++.+ +.
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~g------------~lTlL~Q--d-~v~GLQV~~~------------------g~ 243 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDAN------------LITVLLQ--D-EVSGLQVFKD------------------GK 243 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCCC------------ceEEEEE--C-CCCceEEEEC------------------Cc
Confidence 35888999872 1245788864 5777744 4 2356555532 24
Q ss_pred CeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 235 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
.+.|+|..|..||--- ...||. -..+.|++.....++||++.-+++-
T Consensus 244 Wi~V~p~pgalvVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Sia~F~~p 294 (348)
T PLN02912 244 WIAVNPIPNTFIVNLGDQMQVISNDK-YKSVLHRAVVNTDKERISIPTFYCP 294 (348)
T ss_pred EEECCCcCCeEEEEcCHHHHHHhCCE-EEcccccccCCCCCCEEEEEEEecC
Confidence 7899999998887521 112221 2478999864445679998877653
No 42
>PLN02947 oxidoreductase
Probab=83.78 E-value=12 Score=36.12 Aligned_cols=87 Identities=18% Similarity=0.170 Sum_probs=54.6
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
-+++.+|.+.. ...+|+|+. .+|+|+- ++ .||==++.+ +..
T Consensus 226 ~lrln~YPp~p~~~~~~G~~~HTD~g------------~lTlL~Q-d~--v~GLQV~~~------------------g~W 272 (374)
T PLN02947 226 MMVVNCYPACPEPELTLGMPPHSDYG------------FLTLLLQ-DE--VEGLQIMHA------------------GRW 272 (374)
T ss_pred eeeeecCCCCCCcccccCCCCccCCC------------ceEEEEe-cC--CCCeeEeEC------------------CEE
Confidence 57778888731 245788753 5788765 33 356555542 147
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|..||--- ...||. -..++|++.......|+++.-++.-
T Consensus 273 i~V~p~pga~VVNvGD~Lq~~SNG~-~kS~~HRVv~~~~~~R~Sia~F~~P 322 (374)
T PLN02947 273 VTVEPIPGSFVVNVGDHLEIFSNGR-YKSVLHRVRVNSTKPRISVASLHSL 322 (374)
T ss_pred EeCCCCCCeEEEEeCceeeeeeCCE-EeccccccccCCCCCEEEEEEEecC
Confidence 889999988776421 112332 2478999965555679988877653
No 43
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=83.42 E-value=12 Score=35.49 Aligned_cols=90 Identities=17% Similarity=0.070 Sum_probs=55.5
Q ss_pred cccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCc
Q 023073 161 EGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 234 (287)
Q Consensus 161 E~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 234 (287)
..+++.+|.+-. ...+|.|+. .+|+|+- | ..||==++...+ +.
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d-~v~GLQV~~~~~----------------g~ 241 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDGG------------ALTVLAQ--D-DVGGLQISRRSD----------------GE 241 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCCC------------eEEEEec--C-CCCceEEeecCC----------------Ce
Confidence 358899998631 246788864 5677633 3 235544443211 24
Q ss_pred CeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 235 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
.+.|+|..|..||=-- ...||. =..++|++......+||++.-+++-
T Consensus 242 Wi~V~p~pg~~vVNiGD~L~~~Tng~-~~St~HRVv~~~~~~R~Si~~F~~P 292 (345)
T PLN02750 242 WIPVKPIPDAFIINIGNCMQVWTNDL-YWSAEHRVVVNSQKERFSIPFFFFP 292 (345)
T ss_pred EEEccCCCCeEEEEhHHHHHHHhCCe-eecccceeccCCCCCEEEEEEeecC
Confidence 7899999998877421 122222 2478999976555679988877654
No 44
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=82.53 E-value=16 Score=35.05 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=53.7
Q ss_pred ccEEEEcCCC----C--ccccCcCCcccccccCCCCceEEEEEEeccCC-CCCceeeecCCCCCCCCCCccccccccCCc
Q 023073 162 GLQVLHYEAG----Q--KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV-EEGGETVFPNAQGNISAVPWWNELSECGKT 234 (287)
Q Consensus 162 ~lqv~rY~~G----~--~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~-~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 234 (287)
.+++.+|.+- . .-.+|+|+. .+|+|+ .|. ..||==++.+ +.
T Consensus 212 ~lR~~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~--qd~~~v~GLQV~~~------------------g~ 259 (361)
T PLN02758 212 AVRMNYYPPCSRPDLVLGLSPHSDGS------------ALTVLQ--QGKGSCVGLQILKD------------------NT 259 (361)
T ss_pred eeeeecCCCCCCcccccCccCccCCc------------eeEEEE--eCCCCCCCeeeeeC------------------CE
Confidence 5788888752 1 235788854 577774 443 3456444332 14
Q ss_pred CeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 235 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
.+.|+|..|..||--- ...||. -..+.|++......+||++.-+++
T Consensus 260 Wi~V~p~pgalVVNiGD~L~~~SNG~-~kS~~HRVv~~~~~~R~Sia~F~~ 309 (361)
T PLN02758 260 WVPVHPVPNALVINIGDTLEVLTNGK-YKSVEHRAVTNKEKDRLSIVTFYA 309 (361)
T ss_pred EEeCCCCCCeEEEEccchhhhhcCCe-eecccceeecCCCCCEEEEEEEec
Confidence 7889999998887531 122232 257899997554557888877665
No 45
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=82.43 E-value=9.6 Score=35.47 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=64.5
Q ss_pred HHHHHHHHHHhhcCC-CCC----CCcccEEEEcCCC-----C-ccccCcCCcccccccCCCCceEEEEEEeccCCCCCce
Q 023073 141 IIRDIEKRIADFTFF-PLE----NGEGLQVLHYEAG-----Q-KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGE 209 (287)
Q Consensus 141 v~~~i~~Ri~~~~g~-p~~----~~E~lqv~rY~~G-----~-~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGe 209 (287)
+..+|.+-++..+|+ +.+ ....+++++|.+- + .-.+|.|.. .+|+|+. |...||=
T Consensus 124 l~~~ll~~la~~Lgl~~~~~f~~~~~~lr~~~YP~~p~~~~~~g~~~HtD~g------------~lTlL~q--d~~~~GL 189 (300)
T PLN02365 124 LAMDLARKLAESLGLVEGDFFQGWPSQFRINKYNFTPETVGSSGVQIHTDSG------------FLTILQD--DENVGGL 189 (300)
T ss_pred HHHHHHHHHHHHcCCCChHHHhhcccceeeeecCCCCCccccccccCccCCC------------ceEEEec--CCCcCce
Confidence 344455555555677 432 1236889999542 1 245777753 4777743 4334554
Q ss_pred eeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 210 TVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 210 T~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
=+....+ +..+.|.|..|..||--- ...||. =..++|++......+||++.-++.
T Consensus 190 qV~~~~~----------------g~Wi~V~p~pga~vVNiGD~l~~~TNG~-~~St~HRVv~~~~~~R~Si~~F~~ 248 (300)
T PLN02365 190 EVMDPSS----------------GEFVPVDPLPGTLLVNLGDVATAWSNGR-LCNVKHRVQCKEATMRISIASFLL 248 (300)
T ss_pred EEEECCC----------------CeEEecCCCCCeEEEEhhHHHHHHhCCc-eecccceeEcCCCCCEEEEEEEec
Confidence 4443211 147899999999887421 122232 357899997655557999877754
No 46
>PLN02997 flavonol synthase
Probab=81.94 E-value=8.6 Score=36.32 Aligned_cols=87 Identities=14% Similarity=0.069 Sum_probs=55.1
Q ss_pred ccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+- -...+|.|+. .+|+|+. |. .||==+..+ +..
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~Q--d~-v~GLQV~~~------------------g~W 230 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDMG------------AIALLIP--NE-VPGLQAFKD------------------EQW 230 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCCC------------ceEEEec--CC-CCCEEEeEC------------------CcE
Confidence 4888999863 1256788864 5777743 32 456445432 147
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|.+||--- ...||. -..++|++..-....||++.-+++-
T Consensus 231 i~V~p~pgalvVNiGD~Le~~TNG~-~kSt~HRVv~~~~~~R~Si~fF~~P 280 (325)
T PLN02997 231 LDLNYINSAVVVIIGDQLMRMTNGR-FKNVLHRAKTDKERLRISWPVFVAP 280 (325)
T ss_pred EECCCCCCeEEEEechHHHHHhCCc-cccccceeeCCCCCCEEEEEEEecC
Confidence 899999998887531 122232 3568999975545579988776653
No 47
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=81.13 E-value=14 Score=34.53 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=51.3
Q ss_pred cEEEEcCCC----Cc--cccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCe
Q 023073 163 LQVLHYEAG----QK--YEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGL 236 (287)
Q Consensus 163 lqv~rY~~G----~~--y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l 236 (287)
+++.+|.+- .. ..+|.|+. .+|+|+ .|...|| +.... + ...+
T Consensus 155 lrl~~YP~~~~~~~~~G~~~HtD~g------------~lTlL~--q~~~v~G-LqV~~-~----------------g~Wi 202 (303)
T PLN02403 155 TKVAKYPECPRPELVRGLREHTDAG------------GIILLL--QDDQVPG-LEFLK-D----------------GKWV 202 (303)
T ss_pred eeeEcCCCCCCcccccCccCccCCC------------eEEEEE--ecCCCCc-eEecc-C----------------CeEE
Confidence 789999752 12 45788864 456653 3322344 33321 1 2478
Q ss_pred EEecCCce-EEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 237 SIKPKMGD-ALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 237 ~V~Pk~G~-alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
.|.|..|+ .||--- ...||. -..+.|++.....++||++.-+++-
T Consensus 203 ~V~p~p~~~lvVNvGD~L~~~Tng~-~~S~~HRVv~~~~~~R~Si~~F~~p 252 (303)
T PLN02403 203 PIPPSKNNTIFVNTGDQLEVLSNGR-YKSTLHRVMADKNGSRLSIATFYNP 252 (303)
T ss_pred ECCCCCCCEEEEEehHHHHHHhCCe-eecccceeecCCCCCEEEEEEEEcC
Confidence 89999864 444310 122232 3478899986667789998877654
No 48
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=80.87 E-value=31 Score=30.30 Aligned_cols=85 Identities=18% Similarity=0.264 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCC
Q 023073 141 IIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNIS 220 (287)
Q Consensus 141 v~~~i~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~ 220 (287)
..-.+...+....|.+....|..-+..|.+|+.-.+|.|--... ...-++++-+ |....|-....+
T Consensus 86 ~l~~~~~~~~~~~g~~~~~~ea~Lvn~Y~pGd~ig~HqD~~e~~-----~~~~v~slSL-------g~~~~F~~~~~~-- 151 (194)
T COG3145 86 PLLALFHDLFGAAGYPFEGPEAVLVNRYRPGASIGWHQDKDEED-----DRPPVASLSL-------GAPCIFRLRGRR-- 151 (194)
T ss_pred ccHHHHHHHHHHhcCCCCChhheeEEeccCCCcccccccccccc-----CCCceEEEec-------CCCeEEEecccc--
Confidence 34455566666778887777889999999999999999964321 1112444443 333334322110
Q ss_pred CCCccccccccCCcCeEEecCCceEEEEe
Q 023073 221 AVPWWNELSECGKTGLSIKPKMGDALLFW 249 (287)
Q Consensus 221 ~~~~~~~~~~c~~~~l~V~Pk~G~alvF~ 249 (287)
. .+...++.-..|++|++-
T Consensus 152 ---------r-~~~~~~~~L~~Gdvvvm~ 170 (194)
T COG3145 152 ---------R-RGPGLRLRLEHGDVVVMG 170 (194)
T ss_pred ---------C-CCCceeEEecCCCEEEec
Confidence 0 124788999999999995
No 49
>KOG3959 consensus 2-Oxoglutarate- and iron-dependent dioxygenase-related proteins [General function prediction only]
Probab=80.48 E-value=2.4 Score=38.34 Aligned_cols=93 Identities=25% Similarity=0.373 Sum_probs=53.9
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCC-CCcceeEeC--CCCCc---cccceeeccceeecCCchHHHHHHHHHHHhhcC-
Q 023073 82 EPRAFVYHNFLSKEECEYLINLATPH-MRKSTVVDS--DTGKS---KDSRVRTSSGTFLARGRDKIIRDIEKRIADFTF- 154 (287)
Q Consensus 82 ~P~i~vi~nfLs~eEC~~Li~~a~~~-~~~s~v~~~--~~g~~---~~~~~Rts~~~~l~~~~d~v~~~i~~Ri~~~~g- 154 (287)
-|.+.+++||||.+|-..|++..... +..|+-... ..|.. .-++.|+..-+-+ ....+.+.+|+.++-+
T Consensus 71 ~pG~~lie~Fls~~Eea~l~~~~D~~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~F~G~----P~~~~~v~rrm~~yp~l 146 (306)
T KOG3959|consen 71 IPGLTLIENFLSESEEAKLLNMIDTVPWAQSQSGRRKQDYGPKVNFKKKKLKTDTFVGM----PEYADMVLRRMSEYPVL 146 (306)
T ss_pred cCCeeehhhhhccchHhHHHHHhccCchhhhcccccccccCCccchhhhhhccCcccCC----chHHHHHHHHhhccchh
Confidence 58899999999999999999998754 222211000 01221 1233444443333 3456666677776532
Q ss_pred ---CCCCCCcccEEEEcCC--CCccccCcCCcc
Q 023073 155 ---FPLENGEGLQVLHYEA--GQKYEPHFDYFM 182 (287)
Q Consensus 155 ---~p~~~~E~lqv~rY~~--G~~y~~H~D~~~ 182 (287)
-|++.. =+.|.+ |.--.||.|...
T Consensus 147 ~gfqp~EqC----nLeYep~kgsaIdpH~DD~W 175 (306)
T KOG3959|consen 147 KGFQPFEQC----NLEYEPVKGSAIDPHQDDMW 175 (306)
T ss_pred hccCcHHHc----CcccccccCCccCccccchh
Confidence 222211 134664 888999999654
No 50
>PTZ00273 oxidase reductase; Provisional
Probab=79.77 E-value=26 Score=32.78 Aligned_cols=87 Identities=21% Similarity=0.194 Sum_probs=53.2
Q ss_pred ccEEEEcCCCC-------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCc
Q 023073 162 GLQVLHYEAGQ-------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 234 (287)
Q Consensus 162 ~lqv~rY~~G~-------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 234 (287)
.+++.+|.+.. .-.+|+|.. .+|+|. .|. .||==++... +.
T Consensus 178 ~lrl~~YP~~~~~~~~~~g~~~HTD~g------------~lTlL~--qd~-~~GLqV~~~~-----------------g~ 225 (320)
T PTZ00273 178 VFRMKHYPALPQTKKGRTVCGEHTDYG------------IITLLY--QDS-VGGLQVRNLS-----------------GE 225 (320)
T ss_pred eeeeeecCCCCCccccCcccccccCCC------------eEEEEe--cCC-CCceEEECCC-----------------CC
Confidence 47889997631 135677753 577774 342 3554444321 24
Q ss_pred CeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 235 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
.+.|+|..|.+||--- ...||. -..++|++... ..+||++.-+++-
T Consensus 226 Wi~V~p~pg~lvVNvGD~l~~~TnG~-~kSt~HRVv~~-~~~R~Si~~F~~p 275 (320)
T PTZ00273 226 WMDVPPLEGSFVVNIGDMMEMWSNGR-YRSTPHRVVNT-GVERYSMPFFCEP 275 (320)
T ss_pred EEeCCCCCCeEEEEHHHHHHHHHCCe-eeCCCccccCC-CCCeEEEEEEEcC
Confidence 7889999999887521 122232 24689999744 4579988777653
No 51
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.20 E-value=8.3 Score=35.98 Aligned_cols=93 Identities=19% Similarity=0.248 Sum_probs=56.1
Q ss_pred ccccCcCCcccccccCCCCceEEEEEEeccCCC-CCceeee-cCCCCCCCCCCcccccc-ccCCcCeEEecCCceEEEEe
Q 023073 173 KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISAVPWWNELS-ECGKTGLSIKPKMGDALLFW 249 (287)
Q Consensus 173 ~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~-eGGeT~F-p~~~~~~~~~~~~~~~~-~c~~~~l~V~Pk~G~alvF~ 249 (287)
.=.||.|+... ..+..-...+.+=|-|.. +-|.|.+ |.... .+..|.|.+.+ --....+.|.-.+|+||+|.
T Consensus 132 ~t~~HqD~~~~----~~~~~~lV~~wiAl~d~~~dnGat~vvPgSH~-~~~~~~r~d~~~y~~~~~~pv~lekGDallF~ 206 (299)
T COG5285 132 ATRWHQDYPLV----SPGYPALVNAWIALCDFTEDNGATLVVPGSHK-WDVIPERPDHETYLERNAVPVELEKGDALLFN 206 (299)
T ss_pred ccccccccccc----cCCccceEEEEEeccccccccCceEEEecccc-cccCCCCCCccchhhhcceeeeecCCCEEEEc
Confidence 34689996442 223444666777788863 5677765 54332 11113332221 11123677888999999994
Q ss_pred cCCCCCCCCCCCccccCCcccccEEEEEee
Q 023073 250 SMKPDASLDPSSLHGGCPVIKGNKWSSTKW 279 (287)
Q Consensus 250 n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W 279 (287)
+.++|+.---..+-+-.+...
T Consensus 207 ---------~~L~HaA~aNrT~~~R~A~~~ 227 (299)
T COG5285 207 ---------GSLWHAAGANRTSADRVALTL 227 (299)
T ss_pred ---------chhhhhhhcCCCCcccceEEE
Confidence 689999998888854444443
No 52
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=78.12 E-value=24 Score=30.25 Aligned_cols=86 Identities=17% Similarity=0.150 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCC
Q 023073 140 KIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI 219 (287)
Q Consensus 140 ~v~~~i~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~ 219 (287)
+.+..|.++++...+.+....+..-|..|.+|+.-++|.|.... ....-++++- -|..-.|-......
T Consensus 74 ~~L~~L~~~v~~~~g~~~~~~n~~LvN~Y~~Gd~mg~H~D~~e~-----~~~~pI~SvS-------LG~~r~F~~~~~~~ 141 (169)
T TIGR00568 74 QDLGDLCERVATAAGFPDFQPDACLVNRYAPGATLSLHQDRDEP-----DLRAPLLSVS-------LGLPAIFLIGGLKR 141 (169)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEEeecCCCccccccccccc-----cCCCCEEEEe-------CCCCEEEEecCCcC
Confidence 67788899999888875445567889999999999999994221 1122344433 24444554321100
Q ss_pred CCCCccccccccCCcCeEEecCCceEEEEe
Q 023073 220 SAVPWWNELSECGKTGLSIKPKMGDALLFW 249 (287)
Q Consensus 220 ~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~ 249 (287)
++...++.-.-|++|++.
T Consensus 142 ------------~~~~~~l~L~sGsllvM~ 159 (169)
T TIGR00568 142 ------------NDPPKRLRLHSGDVVIMG 159 (169)
T ss_pred ------------CCceEEEEeCCCCEEEEC
Confidence 112477899999999995
No 53
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=77.84 E-value=23 Score=33.90 Aligned_cols=88 Identities=19% Similarity=0.088 Sum_probs=53.0
Q ss_pred ccEEEEcCCC------CccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+- -.-.+|+|+. .+|+|+- |...||=-+..+ +..
T Consensus 214 ~lRl~~YP~~p~~~~~~g~~~HtD~g------------~lTlL~q--~~~v~GLQV~~~------------------g~W 261 (362)
T PLN02393 214 CLRVNYYPKCPQPDLTLGLSPHSDPG------------GMTILLP--DDNVAGLQVRRD------------------DAW 261 (362)
T ss_pred eeeeeecCCCCCcccccccccccCCc------------eEEEEee--CCCCCcceeeEC------------------CEE
Confidence 5788889652 1256788864 4566633 333355444422 247
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|.|..|.+||--- ...||. -..++|++......+||++.-+++-
T Consensus 262 ~~V~p~pgalVVNiGD~l~~~Tng~-~kSt~HRVv~~~~~~R~SiafF~~P 311 (362)
T PLN02393 262 ITVKPVPDAFIVNIGDQIQVLSNAI-YKSVEHRVIVNSAKERVSLAFFYNP 311 (362)
T ss_pred EECCCCCCeEEEEcchhhHhhcCCe-eeccceecccCCCCCEEEEEEEecC
Confidence 889999998887421 112222 2468999964444579998877654
No 54
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=76.50 E-value=30 Score=32.84 Aligned_cols=87 Identities=15% Similarity=0.195 Sum_probs=55.5
Q ss_pred ccEEEEcCCCC------c--cccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCC
Q 023073 162 GLQVLHYEAGQ------K--YEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGK 233 (287)
Q Consensus 162 ~lqv~rY~~G~------~--y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~ 233 (287)
.+++.+|.+-. . -.+|+|.. .+|+|+- | ..||=-+.... +
T Consensus 179 ~lRl~~YP~~~~~~~~~~~g~~~HTD~g------------~lTlL~Q--d-~v~GLQV~~~~-----------------g 226 (335)
T PLN02156 179 CLRMNHYPEKEETPEKVEIGFGEHTDPQ------------LISLLRS--N-DTAGLQICVKD-----------------G 226 (335)
T ss_pred eEeEEeCCCCCCCccccccCCCCccCCC------------ceEEEEe--C-CCCceEEEeCC-----------------C
Confidence 58899998632 1 34688853 5777744 3 23554444221 2
Q ss_pred cCeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 234 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
..+.|.|..|..||--- ...||. -..+.|++......+||++.-+++
T Consensus 227 ~Wi~Vpp~pga~VVNiGD~l~~wTNg~-~kSt~HRVv~~~~~~R~SiafF~~ 277 (335)
T PLN02156 227 TWVDVPPDHSSFFVLVGDTLQVMTNGR-FKSVKHRVVTNTKRSRISMIYFAG 277 (335)
T ss_pred CEEEccCCCCcEEEEhHHHHHHHhCCe-eeccceeeecCCCCCEEEEEEeec
Confidence 47899999999887531 122332 257899998766667999887765
No 55
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=75.23 E-value=23 Score=33.39 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=59.8
Q ss_pred CcccEEEEcCC------CCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCC
Q 023073 160 GEGLQVLHYEA------GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGK 233 (287)
Q Consensus 160 ~E~lqv~rY~~------G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~ 233 (287)
++.++++||.. ++.-+.|.|+. .+|++ +. ...||--+.+...
T Consensus 173 ~~~~RLlrYP~~~~~~~~~~~GaHtD~G------------~lTLl--~Q-d~~~GLqv~~~~g----------------- 220 (322)
T COG3491 173 NSVLRLLRYPSRPAREGADGVGAHTDYG------------LLTLL--FQ-DDVGGLEVRPPNG----------------- 220 (322)
T ss_pred hheEEEEecCCCcccccccccccccCCC------------eEEEE--Ee-cccCCeEEecCCC-----------------
Confidence 46799999993 44557898874 34554 23 4457777776532
Q ss_pred cCeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeee
Q 023073 234 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWI 280 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~ 280 (287)
+.+.|.|..|..++..- ...+| .-..+.|+++-...=+||++--++
T Consensus 221 ~Wl~v~P~pgtlvVNiGdmLe~~Tng-~lrST~HRV~~~~~~~R~SipfF~ 270 (322)
T COG3491 221 GWLDVPPIPGTLVVNIGDMLERWTNG-RLRSTVHRVRNPPGVDRYSIPFFL 270 (322)
T ss_pred CeeECCCCCCeEEEeHHHHHHHHhCC-eeccccceeecCCCccceeeeeec
Confidence 57999999999999752 12223 235789999988543788876554
No 56
>PHA02985 hypothetical protein; Provisional
Probab=74.44 E-value=26 Score=32.15 Aligned_cols=106 Identities=17% Similarity=0.199 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCC
Q 023073 139 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGN 218 (287)
Q Consensus 139 d~v~~~i~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~ 218 (287)
..+...|++++.+- +-..+.+++..|+.|+.|.. . ...++..+++-+..+..||..+......+
T Consensus 39 ~~I~~EI~~~i~E~----V~~~n~i~i~~f~~~~~~~~-~-----------~~~~~SkilICiqsAkkGG~iIi~~~~~~ 102 (271)
T PHA02985 39 KIILDEIEQYIDET----VLVKNLISIEVFNKKKKYYQ-N-----------IPSRLSKIIICIQSAKKGGCIIIINNITN 102 (271)
T ss_pred hHHHHHHHHhcCCe----EEecceeEEEEEcCCcceEe-e-----------CCCCceeEEEEEeecccCCEEEEeccccc
Confidence 46777787777442 22345789999998866422 1 23467889999999999999988542211
Q ss_pred CCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeeecc
Q 023073 219 ISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNE 284 (287)
Q Consensus 219 ~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~ 284 (287)
..-.++|..|.|++-. |.+-..+.+|.+|.-.++..=+..+.
T Consensus 103 ---------------~K~ii~~~~n~aVlLS---------PLs~Y~Vs~V~kGsli~i~l~idIPS 144 (271)
T PHA02985 103 ---------------NKKIITLNINHIIILS---------PLSKYTVSKVSKGSLIIIVLDIDIPS 144 (271)
T ss_pred ---------------CceEEecCCCeEEEec---------chhhceEEEecCCcEEEEEEEecCCc
Confidence 3467999999999985 57888899999998776665544443
No 57
>PLN02704 flavonol synthase
Probab=73.92 E-value=14 Score=34.86 Aligned_cols=87 Identities=16% Similarity=0.117 Sum_probs=53.5
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
-+++.+|.+-. ...+|.|+. .+|+|+- |. .||==+... +..
T Consensus 200 ~lrl~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~~------------------g~W 246 (335)
T PLN02704 200 LLKINYYPPCPRPDLALGVVAHTDMS------------AITILVP--NE-VQGLQVFRD------------------DHW 246 (335)
T ss_pred hhhhhcCCCCCCcccccCccCccCCc------------ceEEEec--CC-CCceeEeEC------------------CEE
Confidence 36778898621 245788864 4677654 32 445444331 247
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeee
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 282 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~ 282 (287)
+.|+|..|.+||--- ...|| .-..++|++......+||++.-+++-
T Consensus 247 i~V~p~pg~lvVNvGD~L~~~TNg-~~kSt~HRVv~~~~~~R~Si~~F~~p 296 (335)
T PLN02704 247 FDVKYIPNALVIHIGDQIEILSNG-KYKSVLHRTTVNKEKTRMSWPVFLEP 296 (335)
T ss_pred EeCCCCCCeEEEEechHHHHHhCC-eeecccceeecCCCCCeEEEEEEecC
Confidence 889999998777531 11222 12478999975545679998877654
No 58
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=73.49 E-value=26 Score=33.49 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=54.1
Q ss_pred ccEEEEcCCC----C--ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAG----Q--KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G----~--~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
.+++.+|.+- . .-.+|+|+. .+|+|+. | ..||==+... +..
T Consensus 212 ~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~q--d-~v~GLQV~~~------------------g~W 258 (360)
T PLN03178 212 QMKINYYPRCPQPDLALGVEAHTDVS------------ALTFILH--N-MVPGLQVLYE------------------GKW 258 (360)
T ss_pred hhheeccCCCCCCccccCcCCccCCC------------ceEEEee--C-CCCceeEeEC------------------CEE
Confidence 4788899752 1 246888864 5777743 3 2345444321 247
Q ss_pred eEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeeeec
Q 023073 236 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 283 (287)
Q Consensus 236 l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~ 283 (287)
+.|+|..|.+||--- ...||. -..++|++..-..++||++.-+++-+
T Consensus 259 i~V~p~pg~lvVNiGD~L~~~TNG~-~kSt~HRVv~~~~~~R~Si~~F~~P~ 309 (360)
T PLN03178 259 VTAKCVPDSIVVHIGDTLEILSNGR-YKSILHRGLVNKEKVRISWAVFCEPP 309 (360)
T ss_pred EEcCCCCCeEEEEccHHHHHHhCCc-cccccceeecCCCCCeEEEEEEecCC
Confidence 899999998777421 112222 25789998544455799998877643
No 59
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=71.68 E-value=9 Score=33.48 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCcc----cEEEEcCC--CC-----ccccCcCCcccccccCCCCceEEEEEEeccCCCCC
Q 023073 139 DKIIRDIEKRIADFTFFPLENGEG----LQVLHYEA--GQ-----KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEG 207 (287)
Q Consensus 139 d~v~~~i~~Ri~~~~g~p~~~~E~----lqv~rY~~--G~-----~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eG 207 (287)
+++++.|.....++++......++ ++-.|+.. ++ -=+.|.|+. .-++..++--+++ +|
T Consensus 70 ~~~~~~ll~~~~~~~~~~~~~~~~~~i~vHq~Ri~a~~~~~g~ptPEGiH~DG~----------d~v~~~li~r~Ni-~G 138 (195)
T PF10014_consen 70 NPVLQALLRFDAEIFGWDEDSSEPWHIGVHQIRIIATPDEPGEPTPEGIHRDGV----------DFVFIHLINRHNI-EG 138 (195)
T ss_dssp SHHHHHHHHHHHHHHHCCS-GGGEEEEEEEEEEEETTTS--B--STTSSB--SS----------SEEEEEEEEEESE-EE
T ss_pred CHHHHHHHHHHHHHhcccccCCCCEEEEEEEEEEEEecCccCCcCCCCccCCCC----------CEEEEEEEcCCCc-cC
Confidence 456666666666555443312223 33345443 22 124566654 4566667666666 79
Q ss_pred ceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCccc
Q 023073 208 GETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 270 (287)
Q Consensus 208 GeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~ 270 (287)
|+|.....+.. ......--..|+.+++- |...+|.+.||..
T Consensus 139 G~s~i~~~~~~--------------~~~~~~l~~p~d~l~~~--------D~~~~H~vtpI~~ 179 (195)
T PF10014_consen 139 GESQIYDNDKE--------------ILFFFTLLEPGDTLLVD--------DRRVWHYVTPIRP 179 (195)
T ss_dssp --EEEEETTSS--------------EEEEE---STTEEEEEE--------TTTEEEEE--EEE
T ss_pred ceEEEEeCCCC--------------cceEEEecCCCCEEEEe--------CCcceECCCceec
Confidence 99988654321 11233445679999985 6899999999974
No 60
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=71.21 E-value=36 Score=32.11 Aligned_cols=88 Identities=19% Similarity=0.192 Sum_probs=57.4
Q ss_pred ccEEEEcCCCC------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcC
Q 023073 162 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 235 (287)
Q Consensus 162 ~lqv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 235 (287)
-+++.+|.+-- ...+|.|.. .+|+| |.|...||--+|. .+ +..
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~------------~lTiL--lqd~~V~GLQv~~-~d----------------g~W 225 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS------------FLTIL--LQDDDVGGLQVFT-KD----------------GKW 225 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC------------ceEEE--EccCCcCceEEEe-cC----------------CeE
Confidence 68888898732 357888853 36666 4554557888885 11 258
Q ss_pred eEEecCCceEEEEe----cCCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 236 LSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 236 l~V~Pk~G~alvF~----n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
+.|+|..|..|+=- ....|| .-...+|++......+|+++-.++.
T Consensus 226 i~V~P~p~a~vVNiGD~l~~lSNG-~ykSv~HRV~~n~~~~R~Sia~F~~ 274 (322)
T KOG0143|consen 226 IDVPPIPGAFVVNIGDMLQILSNG-RYKSVLHRVVVNGEKERISVAFFVF 274 (322)
T ss_pred EECCCCCCCEEEEcccHHhHhhCC-cccceEEEEEeCCCCceEEEEEEec
Confidence 99999997666531 012233 2357899999998888887766543
No 61
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=67.59 E-value=6.4 Score=34.70 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=29.7
Q ss_pred cCeEEecCCceEEEEecCCCCCCCCCCCccccCCc--ccccEEEEEee
Q 023073 234 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPV--IKGNKWSSTKW 279 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV--~~G~K~i~~~W 279 (287)
..+.++-++|++++|-| .+++|+-.+. ..|.|+..+.|
T Consensus 219 ~~~~~~~~~GDlli~dN--------~~~lHgR~~~~~~~~~R~L~R~~ 258 (258)
T PF02668_consen 219 YTYRHRWQPGDLLIWDN--------HRVLHGRTAFDDPDGDRHLLRVW 258 (258)
T ss_dssp GEEEEE--TTEEEEEET--------TTEEEEE--E-STTSSEEEEEEE
T ss_pred hcccccCCCceEEEEcC--------CeeEecCCCCCCCCCCEEEEEeC
Confidence 45778889999999998 6899999999 67899999988
No 62
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=67.09 E-value=40 Score=31.83 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=54.1
Q ss_pred ccEEEEcCCCC-------ccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCc
Q 023073 162 GLQVLHYEAGQ-------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 234 (287)
Q Consensus 162 ~lqv~rY~~G~-------~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 234 (287)
.+++++|.+.. ...+|.|.. .+|+|+ .| ..||==+..... .+++.
T Consensus 183 ~lrl~~YP~~~~~~~~~~g~~~HTD~g------------~lTlL~--qd-~v~GLQV~~~~~-------------~~~g~ 234 (332)
T PLN03002 183 TMRLLRYQGISDPSKGIYACGAHSDFG------------MMTLLA--TD-GVMGLQICKDKN-------------AMPQK 234 (332)
T ss_pred heeeeeCCCCCCcccCccccccccCCC------------eEEEEe--eC-CCCceEEecCCC-------------CCCCc
Confidence 47899998631 235788853 578874 34 245655554310 01124
Q ss_pred CeEEecCCceEEEEec----CCCCCCCCCCCccccCCcccccEEEEEeeee
Q 023073 235 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 281 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~ 281 (287)
.+.|.|..|..||--- ...||. -..++|++..- ..+||++.-+++
T Consensus 235 Wi~Vpp~pg~~VVNiGD~L~~wTng~-~kSt~HRVv~~-~~~R~Sia~F~~ 283 (332)
T PLN03002 235 WEYVPPIKGAFIVNLGDMLERWSNGF-FKSTLHRVLGN-GQERYSIPFFVE 283 (332)
T ss_pred EEECCCCCCeEEEEHHHHHHHHhCCe-eECcCCeecCC-CCCeeEEEEEec
Confidence 7889999999887521 112221 24689999643 457888877655
No 63
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown]
Probab=66.74 E-value=1.1 Score=43.99 Aligned_cols=74 Identities=27% Similarity=0.326 Sum_probs=55.3
Q ss_pred CCceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcc
Q 023073 190 GGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI 269 (287)
Q Consensus 190 ~~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~ 269 (287)
.+-+.....+|+||+++||+..|...+.. -....++|+-|+.+-|.+- -...|+..+|+
T Consensus 363 ~~~~~~~a~~~~~dd~~~~el~~t~~d~~--------------t~~a~~k~~~~re~~~~~g-------~e~~~~~~~~~ 421 (471)
T KOG4459|consen 363 YTELDYFALLYLNDDFEGGELLFTEPDAK--------------TYTAISKPECGRECAFSSG-------AENPHGVKAVT 421 (471)
T ss_pred HHHHHhhccHhhcCccccccceecCCccc--------------chhhccccccccchhhhcc-------ccCccchhhhh
Confidence 34577889999999999999999643221 1356789999999998752 24569999999
Q ss_pred cccEEEEEeeeeecc
Q 023073 270 KGNKWSSTKWIRVNE 284 (287)
Q Consensus 270 ~G~K~i~~~W~~~~~ 284 (287)
+|.+-.+--|....+
T Consensus 422 kg~e~~~~lw~~~~~ 436 (471)
T KOG4459|consen 422 KGLECAVALWPTLAP 436 (471)
T ss_pred hhhHHhhhcCcccCh
Confidence 998777777766544
No 64
>COG4340 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.98 E-value=21 Score=31.34 Aligned_cols=44 Identities=30% Similarity=0.458 Sum_probs=29.0
Q ss_pred CCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCccc
Q 023073 205 EEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 270 (287)
Q Consensus 205 ~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~ 270 (287)
-.||||..+..+.. +-+..=--..|.+++-- |.+.+|.+||+..
T Consensus 158 I~gGet~lY~~~~~--------------~p~f~kvl~pGe~~~l~--------Dh~~~H~~tpi~p 201 (226)
T COG4340 158 IDGGETDLYAPDGA--------------SPGFFKVLAPGEAVFLD--------DHRVLHGVTPIVP 201 (226)
T ss_pred ccCceEEEEccCCC--------------CcceEEeccCCcEEEec--------cchhcccccceec
Confidence 36999999875421 11333334467766553 7899999999874
No 65
>KOG4176 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.75 E-value=1.1e+02 Score=28.96 Aligned_cols=117 Identities=20% Similarity=0.292 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCcccEEEEcCCCCccccCcCCcccccccCCCCceEEEEEEeccCCCC--CceeeecCCC
Q 023073 139 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEE--GGETVFPNAQ 216 (287)
Q Consensus 139 d~v~~~i~~Ri~~~~g~p~~~~E~lqv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~e--GGeT~Fp~~~ 216 (287)
..+++.|.+|+-.+--+|. .-+.+-+..|++|+.-.||+|... ..+.+.|+ .+|+|+.. |=....-...
T Consensus 189 Ps~~~~ii~rlv~~~~ip~-~pd~~~iN~Ye~G~~i~ph~~~~~-------F~~Pi~sl-S~lSe~~m~Fg~~~~~~~~~ 259 (323)
T KOG4176|consen 189 PSLFKSIIDRLVSWRVIPE-RPDQCTINFYEPGDGIPPHIDHSA-------FLDPISSL-SFLSECTMEFGHGLLSDNIG 259 (323)
T ss_pred chHHHHHHHHhhhhccCCC-CCCeeEEEeeCCCCCCCCCCChHH-------hcCceEEE-EeecceeEEecccccccCcc
Confidence 3467777788777766765 456789999999999999996432 23344444 35666421 1111110000
Q ss_pred CCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeeeccc
Q 023073 217 GNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEY 285 (287)
Q Consensus 217 ~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~ 285 (287)
+ + ..-+++.-..|.+++-.+... ....|+++|+. +|.+..++.+.++.
T Consensus 260 -~---------~----~g~~s~p~~~g~~lvi~~~~a-----d~~~~~~~~~~--~kRisitfrki~~~ 307 (323)
T KOG4176|consen 260 -N---------F----RGSLSLPLRYGSVLVIRGRSA-----DVAPHCIRPSR--NKRISITFRKIRPD 307 (323)
T ss_pred -c---------c----ccccccccccCeEEEeCCCcc-----cccccccCCCC--CceEEEEEEEeccC
Confidence 0 0 012667777888888765322 25678999943 57777777777664
No 66
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=53.77 E-value=19 Score=32.42 Aligned_cols=40 Identities=28% Similarity=0.543 Sum_probs=34.0
Q ss_pred cCeEEecCCceEEEEecCCCCCCCCCCCccccCCccc---ccEEEEEeeee
Q 023073 234 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK---GNKWSSTKWIR 281 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~---G~K~i~~~W~~ 281 (287)
..+.++-++|++|+|-| .+++|+-.+-.. +.||..+.|+.
T Consensus 218 ~~~~~~l~~Gdivi~DN--------~r~lHgR~~f~~~~~~~R~L~r~~i~ 260 (262)
T cd00250 218 NQLTVKLEPGDLLIFDN--------RRVLHGRTAFSPRYGGDRWLKGCYVD 260 (262)
T ss_pred hEEEEEcCCCCEEEEec--------hhhhcCCCCCCCCCCCceEEEEEEec
Confidence 46789999999999988 689999988764 57999999985
No 67
>PF13677 MotB_plug: Membrane MotB of proton-channel complex MotA/MotB
Probab=52.98 E-value=38 Score=23.63 Aligned_cols=24 Identities=21% Similarity=0.069 Sum_probs=11.8
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHH
Q 023073 1 MAKPRYSRFPTRKSSSSTLILTLL 24 (287)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~ 24 (287)
|+|.|..+-.......+.+.++=|
T Consensus 1 Makkk~~~~~~~~~~~WlvtyaDl 24 (58)
T PF13677_consen 1 MAKKKKKEEEEEGSPRWLVTYADL 24 (58)
T ss_pred CCCCCCCCCCCCCCccHHHHHHHH
Confidence 777776333344444444444433
No 68
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=48.14 E-value=20 Score=35.06 Aligned_cols=75 Identities=23% Similarity=0.376 Sum_probs=49.8
Q ss_pred CceEEEEEEeccCCCCCceeeecCCCCCCCCC--CccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCc
Q 023073 191 GQRMATVLMYLSDVEEGGETVFPNAQGNISAV--PWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPV 268 (287)
Q Consensus 191 ~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~--~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV 268 (287)
..|..|+.+||++.++||+..|-......... .-|.-+..|. .-|.+++.++ .+.|...+-
T Consensus 280 ~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~~~~~EiFdn~h--------~p~qa~LHrg---------~~~~~a~~~ 342 (415)
T KOG1971|consen 280 DAREVGLFVCLSNQFEGGELLFTGKYCTKHLRTDDLWEIFDNSH--------DPGQAYLHRG---------YHKHGARAT 342 (415)
T ss_pred chhhcceeEEecccccCCeeEeeccccccccCCCchhhhccCcC--------CCccceecCc---------chhcccccc
Confidence 46899999999999999999998765443221 1244444442 2567788775 456666665
Q ss_pred ccccEEEEEeeeee
Q 023073 269 IKGNKWSSTKWIRV 282 (287)
Q Consensus 269 ~~G~K~i~~~W~~~ 282 (287)
..|..+.-..|+..
T Consensus 343 ~~~~~~~nv~~~~~ 356 (415)
T KOG1971|consen 343 IVGQPCPNVYWFPI 356 (415)
T ss_pred CCCCCCCceeeehh
Confidence 66666666666654
No 69
>PRK09965 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional
Probab=37.27 E-value=71 Score=24.62 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=32.5
Q ss_pred EEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 196 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 196 T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
+.+.-++|..+|+...|... ..+.|.-..|....|.| ...|.++|+..|
T Consensus 4 ~~v~~~~~l~~g~~~~~~~~------------------~~i~v~~~~g~~~A~~~---------~CpH~g~~L~~G 52 (106)
T PRK09965 4 IYACPVADLPEGEALRVDTS------------------PVIALFNVGGEFYAIDD---------RCSHGNASLSEG 52 (106)
T ss_pred EEeeeHHHcCCCCeEEEeCC------------------CeEEEEEECCEEEEEeC---------cCCCCCCCCCce
Confidence 34556778878877777532 12444445777777765 788999998644
No 70
>cd03528 Rieske_RO_ferredoxin Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO). The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The ferredoxin component contains either a plant-type or Rieske-type [2Fe-2S] cluster. The Rieske ferredoxin component in this family carries an electron from the RO reductase component to the terminal RO oxygenase component. BPDO degrades biphenyls and polychlorinated biphenyls. BPDO ferredoxin (BphF) has structural features consistent with a minimal and perhaps archetypical Rieske protein in that the in
Probab=36.81 E-value=64 Score=24.11 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=29.6
Q ss_pred EEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 198 LMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 198 llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
+.-++|...|+...|.... ..+.|.-..|....|.| ...|.|+|+..|
T Consensus 4 v~~~~~l~~g~~~~~~~~g-----------------~~~~v~r~~~~~~a~~~---------~CpH~g~~L~~g 51 (98)
T cd03528 4 VCAVDELPEGEPKRVDVGG-----------------RPIAVYRVDGEFYATDD---------LCTHGDASLSEG 51 (98)
T ss_pred EEEhhhcCCCCEEEEEECC-----------------eEEEEEEECCEEEEECC---------cCCCCCCCCCCC
Confidence 3445666666666664321 23444444667777755 789999998765
No 71
>PF03579 SHP: Small hydrophobic protein; InterPro: IPR005327 The small hydrophobic integral membrane protein, SH (previously designated 1A) is found to have a variety of glycosylated forms [, ]. This protein is a component of the mature respiratory syncytial virion [] where it may form complexes and appears to play a structural role.; GO: 0016020 membrane, 0016021 integral to membrane, 0048222 glycoprotein network
Probab=35.67 E-value=56 Score=23.05 Aligned_cols=29 Identities=28% Similarity=0.257 Sum_probs=21.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhhc
Q 023073 12 RKSSSSTLILTLLIMFTFAILILLAFGIL 40 (287)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (287)
+-|.-+||++.++...+|++.+-+-++|+
T Consensus 13 kFW~YFtLi~M~lti~~~~Iv~si~~AIL 41 (64)
T PF03579_consen 13 KFWTYFTLIFMMLTIGFFFIVTSIMAAIL 41 (64)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33666799998888888887777666664
No 72
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=34.12 E-value=68 Score=31.04 Aligned_cols=32 Identities=25% Similarity=0.573 Sum_probs=24.5
Q ss_pred HHhhcCCCCCCCcccEEEEcC-CCCccccCcCCc
Q 023073 149 IADFTFFPLENGEGLQVLHYE-AGQKYEPHFDYF 181 (287)
Q Consensus 149 i~~~~g~p~~~~E~lqv~rY~-~G~~y~~H~D~~ 181 (287)
+..|-++|--....+.|. |. +||.|++|+|..
T Consensus 107 ~~~FrflP~wr~ddiMIS-~a~~GGgvg~H~D~Y 139 (383)
T COG2850 107 MEPFRFLPDWRIDDIMIS-FAAPGGGVGPHFDQY 139 (383)
T ss_pred HHHhccCccccccceEEE-EecCCCccCccccch
Confidence 336667887667778888 65 699999999975
No 73
>cd03474 Rieske_T4moC Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. T4mo is a four-protein complex that catalyzes the NADH- and O2-dependent hydroxylation of toluene to form p-cresol. T4mo consists of an NADH oxidoreductase (T4moF), a diiron hydroxylase (T4moH), a catalytic effector protein (T4moD), and a Rieske ferredoxin (T4moC). T4moC contains a Rieske domain and functions as an obligate electron carrier between T4moF and T4moH. Rieske ferredoxins are found as subunits of membrane oxidase complexes, cis-dihydrodiol-forming aromatic dioxygenases, bacterial assimilatory nitrite reductases, and arsenite oxidase. Rieske ferredoxins are also found as soluble electron carriers in bacterial dioxygenase and monooxygenase complexes.
Probab=32.89 E-value=87 Score=23.99 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=19.8
Q ss_pred eEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 236 LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 236 l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
+-++...|..-.|.| .+.|+++|+..|
T Consensus 26 ~~~~~~~g~~~A~~n---------~CpH~g~~L~~g 52 (108)
T cd03474 26 LLVAPEGGEFRAFQG---------ICPHQEIPLAEG 52 (108)
T ss_pred EEEEccCCeEEEEcC---------cCCCCCCCcccC
Confidence 456666777777765 788999998766
No 74
>cd03530 Rieske_NirD_small_Bacillus Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.
Probab=32.32 E-value=72 Score=23.94 Aligned_cols=25 Identities=16% Similarity=0.338 Sum_probs=17.6
Q ss_pred EecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 238 IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 238 V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
++...|....|.| ...|.++|+..|
T Consensus 28 ~r~~~g~~~A~~~---------~CpH~g~~L~~g 52 (98)
T cd03530 28 FRTADDEVFALEN---------RCPHKGGPLSEG 52 (98)
T ss_pred EEeCCCCEEEEcC---------cCCCCCCCccCC
Confidence 4444577666654 788999998766
No 75
>PF11807 DUF3328: Domain of unknown function (DUF3328); InterPro: IPR021765 This family of proteins are functionally uncharacterised. This family is only found in eukaryotes.
Probab=30.92 E-value=85 Score=26.54 Aligned_cols=6 Identities=33% Similarity=0.456 Sum_probs=2.7
Q ss_pred cCcCCc
Q 023073 176 PHFDYF 181 (287)
Q Consensus 176 ~H~D~~ 181 (287)
.|.|+.
T Consensus 161 ~H~~HC 166 (217)
T PF11807_consen 161 EHIDHC 166 (217)
T ss_pred chhHHH
Confidence 354443
No 76
>cd04338 Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane. This domain represents the N-terminal Rieske domain of the Tic55 oxygenase alpha subunit. Tic55 is closely related to the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO), Ptc52, and ACD1 (accelerated cell death 1). ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis.
Probab=29.70 E-value=90 Score=25.30 Aligned_cols=70 Identities=10% Similarity=-0.035 Sum_probs=44.7
Q ss_pred CceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCccc
Q 023073 191 GQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 270 (287)
Q Consensus 191 ~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~ 270 (287)
..+.+..+..++|..+|+-..|.... +.-+-++-..|.+-.|.| .+.|+|.|+..
T Consensus 14 ~~~~W~~v~~~~el~~~~~~~~~v~g----------------~~ivl~r~~~G~v~A~~n---------~CpHrga~L~~ 68 (134)
T cd04338 14 WREEWYPLYLLKDVPTDAPLGLSVYD----------------EPFVLFRDQNGQLRCLED---------RCPHRLAKLSE 68 (134)
T ss_pred cccCcEEEEEHHHCCCCCCEEEEECC----------------ceEEEEEcCCCCEEEEcC---------cCCCCcCcccC
Confidence 34567788889998888876665321 122334456777777765 78999999988
Q ss_pred ccE--EEEEeeeeeccc
Q 023073 271 GNK--WSSTKWIRVNEY 285 (287)
Q Consensus 271 G~K--~i~~~W~~~~~~ 285 (287)
|.- =.++-.+|.-.|
T Consensus 69 G~~~~~~i~CP~Hgw~F 85 (134)
T cd04338 69 GQLIDGKLECLYHGWQF 85 (134)
T ss_pred CeecCCEEEccCCCCEE
Confidence 741 134445544433
No 77
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=29.12 E-value=35 Score=31.17 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=0.0
Q ss_pred cCcCCcccccccCCCCceEEEEEEeccCCCCCceeee
Q 023073 176 PHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVF 212 (287)
Q Consensus 176 ~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~F 212 (287)
||.|..... ..-.+++|..+.-+.+||+|.|
T Consensus 96 wHtD~sy~~------~pp~~~~L~~~~~p~~GG~T~f 126 (277)
T PRK09553 96 WHTDVTFIE------TPPLGAILAAKQLPSTGGDTLW 126 (277)
T ss_pred CeecccCee------CCCceeEEEEEecCCCCCccHh
No 78
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A ....
Probab=28.29 E-value=95 Score=26.90 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=30.3
Q ss_pred cCeEEecCCceEEEEecCCCCCCCCCCCccccCCcc-cccEEEEEeeeeec
Q 023073 234 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI-KGNKWSSTKWIRVN 283 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~W~~~~ 283 (287)
..+.+.-.+|++|+.+. ..+|.+.-.. .+.-.++|-|++..
T Consensus 207 ~~~~~~l~pGD~LfiP~---------gWwH~V~~~~~~~~sisvn~w~~~~ 248 (251)
T PF13621_consen 207 PPYEVVLEPGDVLFIPP---------GWWHQVENLSDDDLSISVNYWFRTP 248 (251)
T ss_dssp -EEEEEEETT-EEEE-T---------T-EEEEEESTTSSCEEEEEEEEESS
T ss_pred ceeEEEECCCeEEEECC---------CCeEEEEEcCCCCeEEEEEEEeccc
Confidence 57888999999999985 7899999883 33478899999865
No 79
>cd03467 Rieske Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.
Probab=27.16 E-value=1.4e+02 Score=22.24 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=18.8
Q ss_pred CCCCccccCCccccc--EEEEEeeeeeccc
Q 023073 258 DPSSLHGGCPVIKGN--KWSSTKWIRVNEY 285 (287)
Q Consensus 258 D~~~lH~g~PV~~G~--K~i~~~W~~~~~~ 285 (287)
+....|.++|+..|. .-.++-..|...|
T Consensus 39 ~~~CpH~g~~l~~~~~~~~~i~Cp~H~~~f 68 (98)
T cd03467 39 SNRCTHQGCPLSEGEGEDGCIVCPCHGSRF 68 (98)
T ss_pred cCcCCCCCccCCcCccCCCEEEeCCCCCEE
Confidence 357889999998763 4455555555554
No 80
>cd03542 Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. HBDO catalyzes the double hydroxylation of 2-halobenzoates with concomitant release of halogenide and carbon dioxide, yielding catechol.
Probab=27.16 E-value=83 Score=25.20 Aligned_cols=42 Identities=17% Similarity=0.102 Sum_probs=27.3
Q ss_pred CeEEecCCceEEEEecCCCCCCCCCCCccccCCccccc---EEEEEeeeeeccc
Q 023073 235 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN---KWSSTKWIRVNEY 285 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~---K~i~~~W~~~~~~ 285 (287)
-+-++...|..-.|.| ...|+|+++..|. .-.++-.+|.-.|
T Consensus 26 i~l~r~~~g~v~A~~n---------~C~Hrg~~L~~g~~~~~~~i~CP~Hg~~F 70 (123)
T cd03542 26 VVITRDKDGELNAFIN---------ACSHRGAMLCRRKQGNKGTFTCPFHGWTF 70 (123)
T ss_pred EEEEECCCCCEEEEcc---------cCcCCCCccccccccCCCEEECcCCCCEe
Confidence 3456667788888876 7889999997652 2245555554433
No 81
>PF14851 FAM176: FAM176 family
Probab=26.89 E-value=53 Score=27.79 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHhhhccCC
Q 023073 21 LTLLIMFTFAILILLAFGILSMP 43 (287)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~ 43 (287)
+++++++++++.+||.|.++.+.
T Consensus 22 ~aLYFv~gVC~GLlLtLcllV~r 44 (153)
T PF14851_consen 22 FALYFVSGVCAGLLLTLCLLVIR 44 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 56778888888888888776544
No 82
>cd04337 Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b. CAO is found not only in plants but also in chlorophytes and prochlorophytes. This domain represents the N-terminal rieske domain of the oxygenase alpha subunit. ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Cao is closely related to several other plant RO's including Tic 55, a 55 kDa protein associated with protein transport through the inner
Probab=26.04 E-value=1.2e+02 Score=24.47 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=39.2
Q ss_pred CceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCccc
Q 023073 191 GQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 270 (287)
Q Consensus 191 ~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~ 270 (287)
..+.+..+..+++..+|.-..|.... ..-+-++-..|+.-.|.| .+.|.|+|+..
T Consensus 14 ~~~~W~~v~~~~el~~g~~~~~~v~g----------------~~l~l~r~~~g~v~A~~n---------~CpH~g~~L~~ 68 (129)
T cd04337 14 LRNFWYPVEFSKDLKMDTMVPFELFG----------------QPWVLFRDEDGTPGCIRD---------ECAHRACPLSL 68 (129)
T ss_pred hhCccEEEEEHHHCCCCCeEEEEECC----------------cEEEEEECCCCcEEEEeC---------cCCCCcCCccc
Confidence 34567777788888887777776432 123445666788888865 78999999987
Q ss_pred c
Q 023073 271 G 271 (287)
Q Consensus 271 G 271 (287)
|
T Consensus 69 G 69 (129)
T cd04337 69 G 69 (129)
T ss_pred C
Confidence 7
No 83
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=25.83 E-value=61 Score=30.91 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=35.5
Q ss_pred cCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccccEEEEEeeeeeccc
Q 023073 234 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEY 285 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~W~~~~~~ 285 (287)
..+.++-+.|++++|-| .+++|+-..-. |.||..-.++.-.+|
T Consensus 311 ~~~~~~l~pGd~vi~DN--------~rvLHgRtaf~-g~R~L~G~Y~d~D~~ 353 (362)
T TIGR02410 311 NEIEFKLRPGTVLIFDN--------WRVLHSRTSFT-GYRRMCGCYLTRDDF 353 (362)
T ss_pred cEEEEEcCCccEEEEee--------EEEeecCCCcC-CceEEEEEEEccHHH
Confidence 46788999999999998 68999999884 889988887765544
No 84
>PF00355 Rieske: Rieske [2Fe-2S] domain; InterPro: IPR017941 There are multiple types of iron-sulphur clusters which are grouped into three main categories based on their atomic content: [2Fe-2S], [3Fe-4S], [4Fe-4S] (see PDOC00176 from PROSITEDOC), and other hybrid or mixed metal types. Two general types of [2Fe-2S] clusters are known and they differ in their coordinating residues. The ferredoxin-type [2Fe-2S] clusters are coordinated to the protein by four cysteine residues (see PDOC00175 from PROSITEDOC). The Rieske-type [2Fe-2S] cluster is coordinated to its protein by two cysteine residues and two histidine residues [, ]. The structure of several Rieske domains has been solved []. It contains three layers of antiparallel beta sheets forming two beta sandwiches. Both beta sandwiches share the central sheet 2. The metal-binding site is at the top of the beta sandwich formed by the sheets 2 and 3. The Fe1 iron of the Rieske cluster is coordinated by two cysteines while the other iron Fe2 is coordinated by two histidines. Two inorganic sulphide ions bridge the two iron ions forming a flat, rhombic cluster. Rieske-type iron-sulphur clusters are common to electron transfer chains of mitochondria and chloroplast and to non-haem iron oxygenase systems: The Rieske protein of the Ubiquinol-cytochrome c reductase (1.10.2.2 from EC) (also known as the bc1 complex or complex III), a complex of the electron transport chains of mitochondria and of some aerobic prokaryotes; it catalyses the oxidoreduction of ubiquinol and cytochrome c. The Rieske protein of chloroplastic plastoquinone-plastocyanin reductase (1.10.99.1 from EC) (also known as the b6f complex). It is functionally similar to the bc1 complex and catalyses the oxidoreduction of plastoquinol and cytochrome f. Bacterial naphthalene 1,2-dioxygenase subunit alpha, a component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyses the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol. Bacterial 3-phenylpropionate dioxygenase ferredoxin subunit. Bacterial toluene monoxygenase. Bacterial biphenyl dioxygenase. ; GO: 0016491 oxidoreductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process; PDB: 2XRX_A 2XR8_O 2XSH_G 2XSO_I 2YFI_C 2YFL_A 2YFJ_K 1G8J_D 1G8K_D 1NYK_B ....
Probab=25.79 E-value=1.2e+02 Score=22.39 Aligned_cols=29 Identities=24% Similarity=0.511 Sum_probs=22.2
Q ss_pred CeEEecCCceEEEEecCCCCCCCCCCCccccCCccccc
Q 023073 235 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN 272 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~ 272 (287)
.+.+.-..|....|.| ...|.++|+..|.
T Consensus 26 ~v~~~~~~g~~~A~~~---------~CpH~g~~l~~~~ 54 (97)
T PF00355_consen 26 LVLVRRSDGEIYAFSN---------RCPHQGCPLSEGP 54 (97)
T ss_dssp EEEEEETTTEEEEEES---------B-TTTSBBGGCSS
T ss_pred EEEEEeCCCCEEEEEc---------cCCccceeEccee
Confidence 4566677888888876 7999999998884
No 85
>PF14927 Neurensin: Neurensin
Probab=25.05 E-value=1.2e+02 Score=25.23 Aligned_cols=10 Identities=20% Similarity=0.002 Sum_probs=5.4
Q ss_pred CCCCCCCCch
Q 023073 7 SRFPTRKSSS 16 (287)
Q Consensus 7 ~~~~~~~~~~ 16 (287)
.+.++++|++
T Consensus 32 ~~~~~~~w~s 41 (140)
T PF14927_consen 32 IQPSPSRWSS 41 (140)
T ss_pred CCCCCCCCcc
Confidence 3555666554
No 86
>PRK06489 hypothetical protein; Provisional
Probab=24.08 E-value=1.9e+02 Score=27.01 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=13.0
Q ss_pred CCCEEEEcCCCCHHHH
Q 023073 82 EPRAFVYHNFLSKEEC 97 (287)
Q Consensus 82 ~P~i~vi~nfLs~eEC 97 (287)
.|.|+++|.+....++
T Consensus 69 gpplvllHG~~~~~~~ 84 (360)
T PRK06489 69 DNAVLVLHGTGGSGKS 84 (360)
T ss_pred CCeEEEeCCCCCchhh
Confidence 4779999999987655
No 87
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=23.51 E-value=1.1e+02 Score=23.31 Aligned_cols=21 Identities=24% Similarity=0.534 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 023073 17 STLILTLLIMFTFAILILLAF 37 (287)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~ 37 (287)
+-+.|++|+++.|+++++++-
T Consensus 42 FWv~LA~FV~~lF~iL~~ms~ 62 (90)
T PF15183_consen 42 FWVSLAAFVVFLFLILLYMSW 62 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 345677777777777777754
No 88
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=23.06 E-value=89 Score=29.76 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=35.2
Q ss_pred cCeEEecCCceEEEEecCCCCCCCCCCCccccCCcc--cccEEEEEeeeeeccc
Q 023073 234 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KGNKWSSTKWIRVNEY 285 (287)
Q Consensus 234 ~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~~W~~~~~~ 285 (287)
..+.++=+.|++++|-| .+++|+..+-. .|.|+..-.++.-.+|
T Consensus 312 ~~~~~~l~pGd~vi~DN--------~rvlH~R~af~~~~~~R~L~g~Y~d~d~~ 357 (366)
T TIGR02409 312 FKFTFKLEPGDLVLFDN--------TRLLHARDAFSNPEGKRHLQGCYADWDGL 357 (366)
T ss_pred cEEEEEcCCCcEEEEec--------eEEeecCCCcCCCCCceEEEEEEEccHHH
Confidence 35678888999999988 68999998875 5788888877765544
No 89
>cd03480 Rieske_RO_Alpha_PaO Rieske non-heme iron oxygenase (RO) family, Pheophorbide a oxygenase (PaO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO) and ACD1 (accelerated cell death 1). ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. PaO expression increases upon physical wounding of plant leaves and is thought to catalyze a key step in chlorophyll degradation. The
Probab=22.88 E-value=2e+02 Score=23.43 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=45.6
Q ss_pred CceEEEEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecC-CceEEEEecCCCCCCCCCCCccccCCcc
Q 023073 191 GQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPK-MGDALLFWSMKPDASLDPSSLHGGCPVI 269 (287)
Q Consensus 191 ~~R~~T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk-~G~alvF~n~~~~g~~D~~~lH~g~PV~ 269 (287)
..+.+..+..++|+.+|+-+.|-... ..-+-++-. .|..-.|.| .+.|+|.|+.
T Consensus 14 ~~~~W~~v~~~~el~~g~~~~~~~~g----------------~~i~v~r~~~dG~~~A~~n---------~CpHrga~L~ 68 (138)
T cd03480 14 WREVWYPVAYVEDLDPSRPTPFTLLG----------------RDLVIWWDRNSQQWRAFDD---------QCPHRLAPLS 68 (138)
T ss_pred CccceEEEEEHHHCCCCCcEEEEECC----------------eeEEEEEECCCCEEEEEcC---------CCcCCcCccc
Confidence 34567778888998887766665431 112233333 788888876 7999999999
Q ss_pred ccc---EEEEEeeeeeccc
Q 023073 270 KGN---KWSSTKWIRVNEY 285 (287)
Q Consensus 270 ~G~---K~i~~~W~~~~~~ 285 (287)
.|. +-.++-.+|.-.|
T Consensus 69 ~G~~~~~~~i~CP~Hgw~F 87 (138)
T cd03480 69 EGRIDEEGCLECPYHGWSF 87 (138)
T ss_pred cceEcCCCEEEeCCCCCEE
Confidence 884 2256666665544
No 90
>cd03477 Rieske_YhfW_C YhfW family, C-terminal Rieske domain; YhfW is a protein of unknown function with an N-terminal DadA-like (glycine/D-amino acid dehydrogenase) domain and a C-terminal Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. It is commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. YhfW is found in bacteria, some eukaryotes and archaea.
Probab=22.72 E-value=1.2e+02 Score=22.79 Aligned_cols=39 Identities=15% Similarity=0.052 Sum_probs=23.6
Q ss_pred EecCCceEEEEecCCCCCCCCCCCccccCCccccc-EEEEEeeeeeccc
Q 023073 238 IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN-KWSSTKWIRVNEY 285 (287)
Q Consensus 238 V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G~-K~i~~~W~~~~~~ 285 (287)
++-..|....|.+ ...|.|+++..|. ...++-.+|...|
T Consensus 26 ~r~~~g~~~A~~~---------~CpH~g~~l~~g~~~~~i~CP~Hg~~F 65 (91)
T cd03477 26 YRDEDGVLHTVSA---------TCTHLGCIVHWNDAEKSWDCPCHGSRF 65 (91)
T ss_pred EECCCCCEEEEcC---------cCCCCCCCCcccCCCCEEECCCCCCEE
Confidence 4455677777654 7889999887653 1244444444443
No 91
>COG4813 ThuA Trehalose utilization protein [Carbohydrate transport and metabolism]
Probab=22.61 E-value=4.6e+02 Score=23.28 Aligned_cols=15 Identities=27% Similarity=0.596 Sum_probs=12.0
Q ss_pred CeEEecCCceEEEEe
Q 023073 235 GLSIKPKMGDALLFW 249 (287)
Q Consensus 235 ~l~V~Pk~G~alvF~ 249 (287)
+++.+--.|++..|.
T Consensus 181 g~T~rRGaG~ifYFr 195 (261)
T COG4813 181 GLTYRRGAGNIFYFR 195 (261)
T ss_pred cceeeecCccEEEeC
Confidence 688888889977774
No 92
>TIGR02223 ftsN cell division protein FtsN. FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by Pfam model pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis.
Probab=20.87 E-value=3.3e+02 Score=25.55 Aligned_cols=12 Identities=25% Similarity=0.409 Sum_probs=6.9
Q ss_pred CCHHHHHHHHHH
Q 023073 92 LSKEECEYLINL 103 (287)
Q Consensus 92 Ls~eEC~~Li~~ 103 (287)
||+++-+.|...
T Consensus 114 lt~eq~q~leq~ 125 (298)
T TIGR02223 114 LTAEQRQLLEQM 125 (298)
T ss_pred cCHHHHHHHHHH
Confidence 566666555443
No 93
>cd03478 Rieske_AIFL_N AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox). The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. AIFL shares 35% homology with human AIF (apoptosis-inducing factor), mainly in the Pyr_redox domain. AIFL is predominantly localized to the mitochondria. AIFL induces apoptosis in a caspase-dependent manner.
Probab=20.83 E-value=1.5e+02 Score=22.03 Aligned_cols=22 Identities=27% Similarity=0.422 Sum_probs=15.7
Q ss_pred CCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 241 KMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 241 k~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
..|....|.| ...|.++|+..|
T Consensus 29 ~~g~~~A~~~---------~CpH~g~~L~~g 50 (95)
T cd03478 29 QGGEVHAIGA---------KCPHYGAPLAKG 50 (95)
T ss_pred ECCEEEEEcC---------cCcCCCCccCCC
Confidence 3566666654 789999998765
No 94
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=20.82 E-value=1.1e+02 Score=27.39 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCccccCcCCcccccccCCCCceEEEEEEeccCCCCCceeeecC
Q 023073 171 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 214 (287)
Q Consensus 171 G~~y~~H~D~~~~~~~~~~~~~R~~T~llYLND~~eGGeT~Fp~ 214 (287)
.....+|+|....+ ..--+.+|..+....+||+|.|-+
T Consensus 93 ~~~l~~HtD~~y~~------~pp~~~~L~cl~~~~~GG~T~~vd 130 (262)
T cd00250 93 NTLLPLHTDLAYHE------YRPGLQILHCLRNTATGGATLLVD 130 (262)
T ss_pred cCCcCccccCCCCC------CCCceEEEEEeccCCCCCcceeee
Confidence 45667999976432 122466777788888999999976
No 95
>cd03535 Rieske_RO_Alpha_NDO Rieske non-heme iron oxygenase (RO) family, Nathphalene 1,2-dioxygenase (NDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. NDO is a three-component RO system consisting of a reductase, a ferredoxin, and a hetero-hexameric alpha-beta subunit oxygenase component. NDO catalyzes the oxidation of naphthalene to cis-(1R,2S)-dihydroxy-1,2-dihydronaphthalene (naphthalene cis-dihydrodiol) with the consumption of O2 and NAD(P)H. NDO has a relaxed substrate specificity and can oxidize almost 1
Probab=20.51 E-value=1.1e+02 Score=24.25 Aligned_cols=52 Identities=17% Similarity=0.235 Sum_probs=30.9
Q ss_pred EEEEeccCCCCCceeeecCCCCCCCCCCccccccccCCcCeEEecCCceEEEEecCCCCCCCCCCCccccCCcccc
Q 023073 196 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 271 (287)
Q Consensus 196 T~llYLND~~eGGeT~Fp~~~~~~~~~~~~~~~~~c~~~~l~V~Pk~G~alvF~n~~~~g~~D~~~lH~g~PV~~G 271 (287)
..+.-++|..++|.-.+..... ..-+-++-..|..-.|.| ...|+|+|+..|
T Consensus 4 ~~v~~~~el~~~g~~~~~~~~~---------------~~iiv~r~~~g~~~A~~n---------~CpHrg~~L~~g 55 (123)
T cd03535 4 VFLGHESEIPNAGDYVVRYIGD---------------DSFIVCRDEDGEIRAMFN---------SCRHRGMQVCRA 55 (123)
T ss_pred EEEEEHHHCCCCCCEEEEEECC---------------eEEEEEECCCCCEEEEcc---------cCccCCCEeecc
Confidence 3445566776666555432210 112344555677777765 788999999765
No 96
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=20.25 E-value=87 Score=24.81 Aligned_cols=15 Identities=27% Similarity=0.549 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHhhhc
Q 023073 26 MFTFAILILLAFGIL 40 (287)
Q Consensus 26 ~~~~~~~~~~~~~~~ 40 (287)
.++++++|+|++.|+
T Consensus 6 il~llLll~l~asl~ 20 (107)
T PF15330_consen 6 ILALLLLLSLAASLL 20 (107)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444443
Done!