Citrus Sinensis ID: 023078

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
Protein Sequence
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYICI
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHccccEEEEEEccccHHHHHHHHHcccccEEEcccccccccHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHccccccEEEccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHcccEEEEEEccccccHHHcHHHHccccccccccEEEEEcccccHHHHHHHHHHccccEEEEHHHHHccccHHHHHHHccccEEEEEEcccHcccccccccccccccccccccccHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHcccccccccccccEEcEEEHHHHHHHHHHHHHccccccEEEEEcccccEcHHHHHHHHHHHHccccccEEEccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHEcc
Coil and Loop (DISEMBL)
MGGTRFIGVFLSRLLvkeghqvtlftrgkapiaqqlpgesdqEFAEFSSKILhlkgdrkdydfvksslsakgfdvvydingreadevepildalpnleqFIYCssagvylksdllphcetdtvdpksrhkgklntESVLEskgvnwtslrpvyiygplnynpvEEWFFHRlkagrpipipgsgiqvtqlgHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAkaagfpepelvhynpkefdfgkkkafpfrDQVIASLKTAFSVNMVKRSMLAFYICI
Flexible Loop (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILhlkgdrkdYDFVKsslsakgfdvVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCEtdtvdpksrhkgklntesvleskgvnwtslrpVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGnekasrqvfniSGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKtafsvnmvKRSMLAFYICI
Low Complexity Region (SEG)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYICI
Disordered region (IsUnstruct)
****RFIGVFLSRLLVKEGHQVTLFTRGKAPI**************FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET******************LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYIC*
Disordered Region (DISOPRED)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYICI
Disordered Region (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ*********AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD***********LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYICI
Disordered Region (DISPRO)
*GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYICI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSMLAFYICI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	287	2.2.26 [Sep-21-2011]
Q9SA52	378	Chloroplast stem-loop bin	yes	no	0.951	0.722	0.861	1e-142
Q9LYA9	406	Chloroplast stem-loop bin	no	no	0.878	0.620	0.367	6e-40
Q45291	329	UDP-glucose 4-epimerase O	no	no	0.787	0.686	0.251	3e-05
P55579	396	Uncharacterized protein y	yes	no	0.742	0.537	0.236	0.0003
P52577	310	Isoflavone reductase homo	no	no	0.477	0.441	0.275	0.0009

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  503 bits (1296), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 236/274 (86%), Positives = 260/274 (94%), Gaps = 1/274 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSV 273
           +VHYNPKEFDFGKKKAFPFRDQ   AS++ A  V
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHV 332

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  164 bits (415), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 144/264 (54%), Gaps = 12/264 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
           GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct: 90  GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
              V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFP 237
           IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA AAG  
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-K 321

Query: 238 EPELVHYNPKEFDFGKKKAFPFRD 261
             E+VHY+PK      KKAF FR+
Sbjct: 322 TVEIVHYDPKAIGVDAKKAFLFRN 345

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 56/282 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  ++G   + +L++ GH VT+         + +P ++             ++GD    
Sbjct: 7   GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVN-- 53

Query: 62  DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
           D V+  LS  GF+ V     R    + VE               +LDA+    +   ++ 
Sbjct: 54  DVVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLESK----GVNWTSLRPVYI---Y 155
           S+A  Y + D++P  E     P + +   KL+ +  + S     G+  TSLR   +   Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173

Query: 156 GPLNYN-PVEEWFF---------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
           G +  N  VE             HR K    G   P P  G  V    H+ DLA+A V  
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232

Query: 203 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKAAGFPEPELV 242
           L  NE    ++FN+ SG+ Y +   +   C +  G P P  V
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTGHPIPAEV 273

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=4 SV=1

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 41/254 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG+ + G  LS+ L+++G  V +F           PG S     EF      LKG   D 
Sbjct: 56  GGSGYFGELLSKQLLRQGTYVRVFDLNP-------PGFSHPNL-EF------LKGTILDR 101

Query: 62  DFVKSSLS--------------AKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSS 105
           + V+ +LS              AK  D+ + +N       + I+D      +E+F+Y SS
Sbjct: 102 NAVRQALSGIDKVFHNVAQVPLAKEKDLFWSVN---CGGTQIIVDESVATGIEKFVYTSS 158

Query: 106 AGVYLKSDLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY 160
           + V+      P  E    +P     +++  G++  +  ++  G++   +RP  + G    
Sbjct: 159 SAVFGAPKSNPVTEETEPNPAEDYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG-YGR 217

Query: 161 NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220
             V +  F  ++ G  IP+ G G    Q  H  DLA A +    +       +NI   ++
Sbjct: 218 QGVVQILFDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAA--SNVKGFATYNIGAAEF 275

Query: 221 VTFDGLARACAKAA 234
            T   L +   K A
Sbjct: 276 GTMRELLQVVIKHA 289

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score = 44.7 bits (104), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct: 11  IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           ++ +  ++  K  DVV    G        ILD    +       +   +L S+     + 
Sbjct: 68  HESLVKAI--KQVDVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120

Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWT 147
           T  V+P KS   GK+     +E++G+ +T
Sbjct: 121 TSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
255542956	381	NAD dependent epimerase/dehydratase, put	0.912	0.687	0.916	1e-143
363806740	378	uncharacterized protein LOC100791076 [Gl	0.951	0.722	0.872	1e-142
356572914	378	PREDICTED: uncharacterized protein At1g0	0.940	0.714	0.874	1e-141
312282041	379	unnamed protein product [Thellungiella h	0.940	0.712	0.874	1e-141
388497252	378	unknown [Medicago truncatula]	0.951	0.722	0.875	1e-141
118489564	380	unknown [Populus trichocarpa x Populus d	0.912	0.689	0.900	1e-140
388512335	378	unknown [Medicago truncatula]	0.951	0.722	0.872	1e-140
15217485	378	RNA binding protein [Arabidopsis thalian	0.951	0.722	0.861	1e-140
224124986	380	predicted protein [Populus trichocarpa]	0.912	0.689	0.900	1e-140
118487652	380	unknown [Populus trichocarpa]	0.912	0.689	0.900	1e-140

>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 240/262 (91%), Positives = 253/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAKA GFPEPE
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPE 300

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPKEFDFGKKKAFPFRDQ
Sbjct: 301 IVHYNPKEFDFGKKKAFPFRDQ 322

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 239/274 (87%), Positives = 262/274 (95%), Gaps = 1/274 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
           GSGIQ+TQLGHVKDLA+AF+QV GNEKAS++VFNISG+K+VTFDGLARACAKA GFPEPE
Sbjct: 239 GSGIQITQLGHVKDLAKAFIQVFGNEKASKEVFNISGDKHVTFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSV 273
           ++HYNPK+FDFGKKK+FPFRDQ   AS++ A SV
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSV 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/271 (87%), Positives = 259/271 (95%), Gaps = 1/271 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SG+Q+TQLGHVKDLA AF+QVLGNEKAS++VFNISGEKYVTFDGLARACAKA GFPEPE
Sbjct: 239 SSGLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTA 270
           ++HYNPK+FDFGKKK+FPFRDQ   AS++ A
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQHFFASIEKA 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/271 (87%), Positives = 259/271 (95%), Gaps = 1/271 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTA 270
           +VHYNPKEFDFGKKKAFPFRDQ   AS++ A
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKA 329

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/274 (87%), Positives = 259/274 (94%), Gaps = 1/274 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARACAKA GFPEPE
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSV 273
           ++HYNPK+FDFGKKK+FPFRDQ   AS++ A SV
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSV 332

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/262 (90%), Positives = 254/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPK+FDFGKKKAFPFRDQ
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQ 321

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/274 (87%), Positives = 258/274 (94%), Gaps = 1/274 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARAC KA GFPEPE
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACVKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSV 273
           ++HYNPK+FDFGKKK+FPFRDQ   AS++ A SV
Sbjct: 299 IIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSV 332

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/274 (86%), Positives = 260/274 (94%), Gaps = 1/274 (0%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSV 273
           +VHYNPKEFDFGKKKAFPFRDQ   AS++ A  V
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHV 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/262 (90%), Positives = 253/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPK+FDFGKKKAFPFRDQ
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQ 321

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/262 (90%), Positives = 253/262 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAGFPEPE
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPE 299

Query: 241 LVHYNPKEFDFGKKKAFPFRDQ 262
           +VHYNPK+FDFGKKKAFPFRDQ
Sbjct: 300 IVHYNPKDFDFGKKKAFPFRDQ 321

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.940	0.714	0.867	2.8e-130
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.878	0.620	0.367	4.8e-39
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.891	0.825	0.236	5.9e-05
TIGR_CMR|GSU_0385	294	GSU_0385 "NADH dehydrogenase s	0.362	0.353	0.259	6.2e-05
UNIPROTKB|Q83DM2	301	CBU_0681 "NAD dependent epimer	0.602	0.574	0.275	7.3e-05
TIGR_CMR|CBU_0681	301	CBU_0681 "conserved hypothetic	0.602	0.574	0.275	7.3e-05
UNIPROTKB|Q71YS4	291	LMOf2365_1769 "Putative unchar	0.895	0.883	0.251	8.8e-05
UNIPROTKB|Q81JK7	292	BA_5697 "Uncharacterized prote	0.334	0.328	0.318	0.00026
TIGR_CMR|BA_5697	292	BA_5697 "conserved hypothetica	0.334	0.328	0.318	0.00026
DICTYBASE|DDB_G0281487	349	DDB_G0281487 "3-beta-hydroxyst	0.567	0.467	0.252	0.00047

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
 Identities = 235/271 (86%), Positives = 259/271 (95%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct:    59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
             YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct:   119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query:   121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
             D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct:   179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query:   181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
              SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct:   239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298

Query:   241 LVHYNPKEFDFGKKKAFPFRDQ-VIASLKTA 270
             +VHYNPKEFDFGKKKAFPFRDQ   AS++ A
Sbjct:   299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKA 329

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 97/264 (36%), Positives = 144/264 (54%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
             GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct:    90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct:   149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query:   119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct:   206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query:   179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFP 237
             IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA AAG  
Sbjct:   263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-K 321

Query:   238 EPELVHYNPKEFDFGKKKAFPFRD 261
               E+VHY+PK      KKAF FR+
Sbjct:   322 TVEIVHYDPKAIGVDAKKAFLFRN 345

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 67/283 (23%), Positives = 119/283 (42%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct:    11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  GV +     
Sbjct:    68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119

Query:   116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
                 T  V+P KS   GK+     +E++G+ +T       +G   Y P    F   L + 
Sbjct:   120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT-YAVTGCFGGY-YLPTLVQFEPGLTSP 174

Query:   175 R--PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS-GEKYVTFDGLARACA 231
                 + I G G     +   +D+A   ++ + + +   ++  I      ++ + +     
Sbjct:   175 PRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWE 234

Query:   232 KAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVN 274
             K  G    E  H  P+E      +  P    V+ S+  A  VN
Sbjct:   235 KKIG-KSLEKTHL-PEEQLLKSIQESPIPINVVLSINHAVFVN 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 104 (41.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
 Identities = 28/108 (25%), Positives = 46/108 (42%)

Query:   129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
             H+ K   E V+    ++WT  RP  I+GP   +  +   F  R  A   +P+ G G    
Sbjct:   122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178

Query:   188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
             Q   V D+AR F   L   +   Q + + G   +T++ +     +  G
Sbjct:   179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

UNIPROTKB|Q83DM2 CBU_0681 "NAD dependent epimerase/dehydratase family" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
 Identities = 55/200 (27%), Positives = 85/200 (42%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKAAGF-----PEPE---LVHYNPKEFDFGK-KKAF 257
             + SR V NI+  + ++F  LA    + +       P P    + H   + FD    +KAF
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAF 274

Query:   258 PFRDQVIASLKTAFSVNMVK 277
             P  D    S++     + +K
Sbjct:   275 P--DFSYTSIEDGLQYSQLK 292

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0681 CBU_0681 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
 Identities = 55/200 (27%), Positives = 85/200 (42%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKAAGF-----PEPE---LVHYNPKEFDFGK-KKAF 257
             + SR V NI+  + ++F  LA    + +       P P    + H   + FD    +KAF
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVAIQPSPRQGSMPHNGYRPFDITDCQKAF 274

Query:   258 PFRDQVIASLKTAFSVNMVK 277
             P  D    S++     + +K
Sbjct:   275 P--DFSYTSIEDGLQYSQLK 292

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 119 (46.9 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 73/290 (25%), Positives = 124/290 (42%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
             GGTRF G  L   LV EGH+VT+ TRGK          ++  F +   +++ L  + +D 
Sbjct:     7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55

Query:    62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY-------LKSD 113
              F    L+ + +DV+YD       E    +DA    ++++IY SS  VY       +++D
Sbjct:    56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEAD 112

Query:   114 LLP-HCETDTVDPKSRH--KGKLNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFH 169
               P H E    D +     +GK   E+V   K      ++R   + G  +Y     +  +
Sbjct:   113 FNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHIN 172

Query:   170 RLKAGRPIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
              +K  + I I  S  Q  ++G +  D A  F++ +G E       N +       +G  +
Sbjct:   173 HIKNHQEIGI--SNGQA-EIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIK 229

Query:   229 ACAKAAG-FPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVK 277
                +  G     E V  +  +  FG +K + + D   A+ +  F  N +K
Sbjct:   230 MLEEKIGKLALVEEVTDDVDDSPFGIEKTY-YLDNTKAT-EAGFVFNDLK 277

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0281487 DDB_G0281487 "3-beta-hydroxysteroid dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
 Identities = 47/186 (25%), Positives = 87/186 (46%)

Query:    72 GFDVVYDIN--GREADEVEPILDALPNLEQFIYCSSAGVYLKS-DLLPHCET----DT-V 123
             G+D+ Y +N  G E   +E  +     ++Q +Y SS+ V     D++   ET    D  +
Sbjct:    78 GYDIYYSVNVIGTER-LIEACIKC--GVKQLVYTSSSSVVFNGKDIVNGDETLPYVDKHI 134

Query:   124 DPKSRHKGKLNTESVLESKGVNWT--SLRPVYIYGPLNYNPVEEW--FFHRLKAGRPIPI 179
             DP ++ K +L   +VL++KG N    +LRP  I+GP     V+ W  F    K G+   +
Sbjct:   135 DPYNKTK-ELGERAVLKAKGSNLLVCALRPAGIFGP---REVQGWPQFLKAAKEGKNKFM 190

Query:   180 PGSGIQVTQLGHVKDLARAFV----QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
              G G  +    ++ ++  A +     +  N   S  V+ I+ ++ + F  +     +A G
Sbjct:   191 FGDGNNLCDWTYIDNVVHAHILAADNMTTNSPISGSVYFITNDEPIPFWDMPIFAYEAFG 250

Query:   236 FPEPEL 241
             +  P++
Sbjct:   251 YERPKM 256

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA52	CP41B_ARATH	No assigned EC number	0.8613	0.9512	0.7222	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	CRB	CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding; Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes. (378 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	CSP41A	CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding; Encod [...] (406 aa)			•	•	•		•	•	0.991
	SBPASE	SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase [...] (393 aa)				•			•		0.950
	PRK	PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding; PHOSPHORIBULOKIN [...] (395 aa)				•			•		0.948
	AT3G47070	unknown protein; unknown protein; LOCATED IN- thylakoid, chloroplast thylakoid membrane, chloro [...] (100 aa)				•					0.936
	TRXF1	TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator; THIOREDOXIN F-TYPE 1 (TRXF1); FUNCTIONS IN- enz [...] (178 aa)				•					0.936
	AT1G55480	binding / protein binding; binding / protein binding; FUNCTIONS IN- protein binding, binding; L [...] (335 aa)				•					0.936
	PETC	PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cy [...] (229 aa)				•					0.935
	FBP	fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putativ [...] (417 aa)				•					0.935
	NPQ4	NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding; Encoding PSII-S ( [...] (265 aa)				•			•		0.934
	FNR1	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transfer [...] (360 aa)				•					0.933

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	287
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-162
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	5e-96
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-23
cd08946	200	cd08946, SDR_e, extended (e) SDRs	6e-22
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-19
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-17
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	2e-16
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	7e-14
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-11
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-11
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-10
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	5e-10
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-09
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-09
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	8e-09
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-08
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-08
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-08
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	3e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	4e-08
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-07
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	6e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	4e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	4e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	8e-06
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-05
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	4e-05
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	7e-05
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	1e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	2e-04
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	2e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	0.002
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	0.002
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	0.003
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.003
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.003
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.004
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  455 bits (1173), Expect = e-162
 Identities = 156/264 (59%), Positives = 188/264 (71%), Gaps = 11/264 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           GG  FIG +L++ LVK GH+VTLFTRGK P +Q++  E    F+E SS  +  + GD  D
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
              VKS ++  GFDVVYD NG++ DEVEP+ D    P L+QF++CSSAGVY KSD  PH 
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V PK+   G L  E+ L+  GVNWTS RP YIYGP N    EEWFF RL  GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 238
           IPGSGIQ+TQLGHVKDLA  F  V+GN KA+ Q+FNI  ++ VTFDG+A+ACAKAAGFP 
Sbjct: 236 IPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFP- 294

Query: 239 PELVHYNPKEFDFGKKKAFPFRDQ 262
            E+VHY+PK   FG KKAFPFRDQ
Sbjct: 295 EEIVHYDPKAVGFGAKKAFPFRDQ 318

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  282 bits (724), Expect = 5e-96
 Identities = 104/259 (40%), Positives = 133/259 (51%), Gaps = 24/259 (9%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGTRFIG  L   L+  GH VT+F RG+                     + H+ GDR D
Sbjct: 6   IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
            D ++  L  + FDVV D       +VE  LDA    ++Q+I+ SSA VYLK      + 
Sbjct: 53  RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112

Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            P  E D V   DP    +GK   E VL       +T +RP YIYGP +Y     +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
           L  GRPI +PG G  + Q  HVKDLARA +   GN KA   +FNI+G++ VT+D L  AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232

Query: 231 AKAAGFPEPELVHYNPKEF 249
           AKA G  E E+VH      
Sbjct: 233 AKALGK-EAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 97.7 bits (243), Expect = 1e-23
 Identities = 65/275 (23%), Positives = 93/275 (33%), Gaps = 47/275 (17%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            GG  FIG  L   L+  GH V    R +  +   L G                  D  D
Sbjct: 6   TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVV------------LDLTD 53

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            D V         D V       +  +++  +P      N+               ++F+
Sbjct: 54  RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
           + SS  V          + D   P+        KL  E +L +     G+    LRP  +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
           YGP +   +             K    I I G G Q     +V D+A A +  L  E   
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230

Query: 210 RQVFNI-SGEKYVTFDGLARACAKAAGFPEPELVH 243
             VFNI SG   +T   LA A A+A G   P +V+
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY 265

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 90.4 bits (225), Expect = 6e-22
 Identities = 60/225 (26%), Positives = 85/225 (37%), Gaps = 39/225 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L R L++ GH+V +  R                       ++HL       
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
                  S    D  ++ N         +L+A     +++F+Y SSA VY   + LP  E
Sbjct: 44  -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95

Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
                P S     KL  E +L S     G+    LR   +YGP      + V   F  R 
Sbjct: 96  ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
             G+P+ + G G Q     HV D+ RA +  L N      V+NI 
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L R L++EG++V +  R +   +                 I   +GD  D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52

Query: 62  DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
           D ++  L+    D V           +  +  +           +L+A     +++F++ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
           SS+ VY      P  E   + P S     K   +   E+   + G+    LR   +YGP 
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
           N +P           R+  G+PI + G G Q     +V D+ARA +  L +      ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231

Query: 215 I 215
           I
Sbjct: 232 I 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 48/250 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG QV +F R   P    L G       ++       KGD ++ 
Sbjct: 6   GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53

Query: 62  DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
             ++S+L        +    N   +    PILD   N+                + I+ S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
           S G VY   + LP  E+D   P S +   KL  E  L       G+++T LR    YGP 
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172

Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211
                     P+     +++  G PI I G G  +    ++ DL  A + +L ++     
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE- 228

Query: 212 VFNI-SGEKY 220
           VFNI SG  Y
Sbjct: 229 VFNIGSGIGY 238

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 71/257 (27%), Positives = 98/257 (38%), Gaps = 30/257 (11%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           ++G  L+R L+ +G QVT  TR    +A   P       A+     L   G   D D + 
Sbjct: 8   YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62

Query: 66  SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
            SL            G     +  +LDAL   P +++ IY SS GVY   D      +  
Sbjct: 63  ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116

Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           +    S   G+  L  E  L + G    T LR   IYGP   +P+      RL  G    
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 238
            P +G   T   HV DL  A    L        V+N+  +  VT     +A A+  G P 
Sbjct: 169 RPPAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVVDDLPVTRGEFYQAAAELLGLPP 227

Query: 239 PELVHYNPKEFDFGKKK 255
           P  +   P  F    K+
Sbjct: 228 PPFI---PFAFLREGKR 241

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 69.6 bits (171), Expect = 7e-14
 Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 47/255 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
           G T FIG ++   L K G QV +  R +A   + L  G+  Q        +L ++ D +D
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58

Query: 61  YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
            + ++ +L  +G DVV ++ GR         E +    P           +E+ I+ S+ 
Sbjct: 59  DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
           G             D   P    + K   E  +       T +RP  ++G  +       
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158

Query: 167 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           F +R        P  P+ G G    Q  +V D+A A  + L + +   + + + G K  T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 223 FDGLARACAKAAGFP 237
              L     +  G  
Sbjct: 219 LAELVELLRRLGGRK 233

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 66/265 (24%), Positives = 103/265 (38%), Gaps = 44/265 (16%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F G  L + L++  G  V  F       A       + EF         LKGD  D
Sbjct: 6   GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56

Query: 61  YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
            + V+ +LS  G D V+           R+   EV     + +LDA     +++F+Y SS
Sbjct: 57  RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114

Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
           + V             LP+   D+ D  +  K  +    VLE+ G +     +LRP  I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172

Query: 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASRQ 211
           GP     +    F   + G    + G G  +    +V +LA A +      +  +  S Q
Sbjct: 173 GP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQ 231

Query: 212 VFNISGEKYVTFDGLARACAKAAGF 236
            + I+  +      L R   KA GF
Sbjct: 232 TYFITDAEPHNMFELLRPVWKALGF 256

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 38/208 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L + L+  GHQVT  +R  +                 +  +  ++ D  D 
Sbjct: 5   GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50

Query: 62  DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
             +  +L   G D V D    R  D   V+ +LDA       + +  S+AG+Y  +    
Sbjct: 51  ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
              +     P +R K     E +L + G++WT +RP  ++        E           
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVL 203
            I                D+A A +  L
Sbjct: 166 SI-------------SRADVAAALLDEL 180

Length = 182

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 72/285 (25%), Positives = 106/285 (37%), Gaps = 56/285 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   L++ GH+V +    + GK    + LP        E    +  ++GD 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54

Query: 59  KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
           +D + V+ +          A    V   I        +PI D   N              
Sbjct: 55  RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107

Query: 97  -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
            +++F+Y SS+ VY     LP  E    +P S +   K   E          G+   SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205
              +YGP       Y  V   F  R   G P  I G G Q     +V+D+  A +     
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
             A  +V+NI   K  + + LA    +  G  E E V+  P+  D
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILG-KELEPVYAPPRPGD 270

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 58.5 bits (142), Expect = 5e-10
 Identities = 60/289 (20%), Positives = 98/289 (33%), Gaps = 42/289 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T FIG  + R LV  GH+V    R            SD   A+  +      +GD +D
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54

Query: 61  YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
            D ++ + +         F   +D   +  +     +E + +AL    +  IY S   + 
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114

Query: 110 LKSDLLPHCETDTVDPKS---RHKGKLNTESVLESKGVNWTSLR-PVYIYGPLNYNPVEE 165
             +      E    DP +   R   +      L  +GV  + +R P     P+ +   + 
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALE-LAERGVRASVVRLP-----PVVHGRGDH 168

Query: 166 WFF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
            F        +        G G       H  D AR +   L   KA   V++   E+ +
Sbjct: 169 GFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGI 227

Query: 222 TFDGLARACAKAAGFP-EPELVHYNPKEFDFGKKKAFPFRDQVIASLKT 269
               +A A  +  G P            F +     F   DQ ++S KT
Sbjct: 228 PVKDIAEAIGRRLGVPVVSIPAEEAAAHFGWL--AMFVALDQPVSSQKT 274

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 57.6 bits (139), Expect = 1e-09
 Identities = 51/242 (21%), Positives = 78/242 (32%), Gaps = 33/242 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T F+G  + R L+  GH+V    R     A  L G  +    +    K L       D
Sbjct: 7   GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65

Query: 61  YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
              + S L           V   +   EA        A   ++  +  S  G        
Sbjct: 66  GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
                D   P +  + K   E+ L S G+ +T+LR    Y          +      AG 
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
           P+   G G        V D+A A    L     + + + ++G + +T   LA       G
Sbjct: 162 PVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG 219

Query: 236 FP 237
            P
Sbjct: 220 RP 221

Length = 275

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 53/245 (21%), Positives = 89/245 (36%), Gaps = 48/245 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  +  LL+ +   V    R           E  + FA    ++        DY
Sbjct: 5   GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50

Query: 62  DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
           D  ++   A +G D +             + +  +DA            AGV    YL  
Sbjct: 51  DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100

Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 172
                 + D+    +R  G   TE  LE+ G+ +T LRP +    L      E+    L+
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILE 151

Query: 173 AGRPIPIPGSGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
            G      G G     +  V  +D+A A    L       +V+N++G + +++  LA   
Sbjct: 152 EGTIYGPAGDGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAIL 207

Query: 231 AKAAG 235
           ++A G
Sbjct: 208 SEALG 212

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 60/262 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L++EGH+V       +  +  L   +  +   F      + GD +D 
Sbjct: 6   GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59

Query: 62  DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
             V+  +  K  DVV+                  VE  +               ++ ++ 
Sbjct: 60  SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 104 SSAGVYLKSDLLPHCETDTVD-------PKSRHKGKLN--TESVLESKGVNWTSLRPVYI 154
           S++ VY  +  +P  E   +        P S  K   +    S   S G+  T +RP   
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 155 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 201
           YGP            R  A   IP               G G        VKD AR F+ 
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225

Query: 202 VLGNEKASRQVFNISGEKYVTF 223
           +L   +A  ++ N    + ++ 
Sbjct: 226 ILDAIEAVGEIINNGSGEEISI 247

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG  L+R L+++GH+VTL  R           + DQE           +GD +D 
Sbjct: 5   GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
           D +  ++  +G DVV        + R+  EV+      +L+A     ++ FI+ SS G Y
Sbjct: 54  DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
              DL    E     P    K K  TE+VL    + +T +RP  IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 76/302 (25%), Positives = 116/302 (38%), Gaps = 52/302 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
           GG   IG  L   L++ GHQV +   F  G+       P  +            D+ F +
Sbjct: 7   GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66

Query: 47  FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
           F    ++H     KD D + + +L+    +VV   N  +A +          +++ IY  
Sbjct: 67  FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115

Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
           +A  Y LK    P   +     P S +   K   E  LE  GV++ + R   + GP N  
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175

Query: 162 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKY 220
                F+ RLKAG+   +  +         VKDLAR   + L +       ++  SGE  
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231

Query: 221 VT---FDGLARACAKAAGFPEPELVHYNPKEF------------DFGKKKAFPFRDQVIA 265
                FD +  A       PE E+V   P +             DFG K+  P  + V A
Sbjct: 232 SIKELFDAVVEALD-LPLRPEVEVVELGPDDVPSILLDPSRTFQDFGWKEFTPLSETVSA 290

Query: 266 SL 267
           +L
Sbjct: 291 AL 292

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 44/231 (19%), Positives = 75/231 (32%), Gaps = 46/231 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
           G T  +G  + R L+  G+QV    R  +   +     ++    +     S    L+G  
Sbjct: 6   GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVY----L 110
              D V S+  + G            D      ++DA     +++F+  SS G       
Sbjct: 64  --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              L P+              K   E  L + G+++T +RP    G L  +P        
Sbjct: 119 LEALGPY-----------LDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVL 163

Query: 171 LKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
              G  +  PI  +           D+A    + L    A  + F + G  
Sbjct: 164 GGDGTRLDGPISRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 23/153 (15%)

Query: 136 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 185
           E+  +  G ++ S+ P  +YGP  N++P            FH  K   G+ + + GSG  
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203

Query: 186 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYN 245
             +  +  DLARA V +L N      + N+     ++   LA A A+  GF + E+V ++
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVGF-KGEIV-FD 260

Query: 246 P--------KEFDFGKKKAFPFRDQVIASLKTA 270
                    K  D  K +A  +       L+  
Sbjct: 261 TSKPDGQPRKLLDVSKLRALGWFPFT--PLEQG 291

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 56/272 (20%), Positives = 96/272 (35%), Gaps = 56/272 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F+G  L R L+ +G++V    R  +  A  L G    E  E         GD  D 
Sbjct: 5   GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
             + +++  KG D V+       +  ++  E+    ++   N+          + ++ SS
Sbjct: 54  ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
                        +  P  E    +   R K  L    VLE  ++G++   + P  ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170

Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            +  P              +P  P  G        V+D+A   +  +  EK  R      
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRR------ 219

Query: 217 GEKY------VTFDGLARACAKAAGFPEPELV 242
           GE+Y      ++F  L    A+  G   P   
Sbjct: 220 GERYILGGENLSFKQLFETLAEITGVKPPRRT 251

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 62/272 (22%), Positives = 90/272 (33%), Gaps = 58/272 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+  G +V +  R           E     AE               
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP------------- 46

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-----NLE---------------QFI 101
           D    +    G D V  +  R     +   D L      N E               +F+
Sbjct: 47  DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106

Query: 102 YCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
           + SS  V  +  +  P  ETD   P+  + + KL  E  L     S G+    LRP  +Y
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVY 166

Query: 156 GP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           GP    N+  +       +  G P+P PG+      L  + +L  A    +   KA+   
Sbjct: 167 GPGVRGNFARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAANGT 221

Query: 213 FNISGEKYVT----FDGLARACAKAA-GFPEP 239
           F +S    V+     D + RA  K     P P
Sbjct: 222 FLVSDGPPVSTAELVDEIRRALGKPTRLLPVP 253

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 60/255 (23%), Positives = 98/255 (38%), Gaps = 39/255 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G +  IG  ++R L + G  V L +R G       LPG   +  A           D  D
Sbjct: 6   GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51

Query: 61  YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
              V ++  A+G DV+Y        R  +   P+++     A  N  + +   +  +Y  
Sbjct: 52  ASSVIAA--ARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109

Query: 112 SDLLPHCETDTVDPKSRHKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEE 165
               P  E     P +R KG++     E +L +     +    +R    YGP   N    
Sbjct: 110 QAGSPITEDTPFQPTTR-KGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS--- 165

Query: 166 WFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           W    L A   G+    PG+     +  ++ D+ARA V +     A  + +++ G   +T
Sbjct: 166 WLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAIT 225

Query: 223 FDGLARACAKAAGFP 237
              L    A+AAG P
Sbjct: 226 TRELIAIAARAAGRP 240

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 47/242 (19%), Positives = 73/242 (30%), Gaps = 68/242 (28%)

Query: 2   GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G T   G      +V+E    GH+VT   R  A +                 K+  ++GD
Sbjct: 6   GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
             D + VK +L  +G D V    G   D             I+ A+      + I    A
Sbjct: 50  VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP----------VY 153
           G       +       + P +  +   +      VL   G++WT++RP           Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167

Query: 154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
               L  +                   GS I         DLA   +  L   +  R+  
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205

Query: 214 NI 215
            I
Sbjct: 206 TI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 62/286 (21%), Positives = 102/286 (35%), Gaps = 57/286 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L  EGH V    RG A            +  EF         D ++ 
Sbjct: 7   GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
           +    +    G D V+    D+ G    +    +    N               +E+F++
Sbjct: 56  ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 103 CSSAGVY-----LKSDLLPHCETDTVDPKSRHKG----KLNTESVL----ESKGVNWTSL 149
            SSA VY     L++ ++   E D   P          KL TE +     E  G+    +
Sbjct: 114 ASSACVYPEFKQLETTVVRLREED-AWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIV 172

Query: 150 RPVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201
           R   IYGP   ++   E     +       K G    I G G+Q     ++ D      +
Sbjct: 173 RFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRR 232

Query: 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
           ++  E    +  N+  ++ V+ + LA      +G P  E++H+ P 
Sbjct: 233 LM--ESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPL-EIIHHTPG 275

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 44/247 (17%)

Query: 14  LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
           LL   G +V   TR   +P A+ L     +            +GD  D + ++++L  KG
Sbjct: 18  LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65

Query: 73  FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTV 123
              V+           DE+     ++DA     ++ F++ S   V   +  +PH      
Sbjct: 66  VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH------ 119

Query: 124 DPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGS 182
                   K   E  + + G+  T LRP +       N +      +++ G   + +P  
Sbjct: 120 -----FDSKAEVEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLD 170

Query: 183 GIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 241
                 +  V D+  A   +  +  K + +   ++G++  T + +A A +K  G P    
Sbjct: 171 PDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLGKP---- 225

Query: 242 VHYNPKE 248
           V Y   E
Sbjct: 226 VTYVQVE 232

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 41/177 (23%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 97  LEQFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKG---KLNTESVLES-----KGVNW 146
           + + +  SS  VY     +  P  E   +           K   E +L         +N 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
           T LRP  I GP   N      F    + R +P+PG      Q  H  D+ARA   VL   
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARAL--VLAVR 214

Query: 207 KASRQVFNISGEKYVTFDGLARAC-AKAAGFPEP-----------ELVHYNPKEFDF 251
             +  +FN++G+  V    +      +    P P            L    P++ DF
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALLGRRPVPLPSPLPAALAAARRLGLRPLPPEQLDF 271

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 17/147 (11%)

Query: 116 PHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
           P+ E D  +P + + K KL  E  + +    +  LR  ++YG L    N VE W      
Sbjct: 115 PYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFVE-WMLRLAA 173

Query: 173 AGRPI----PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLA 227
             + +       GS        +  DLA A ++++  E+ S   ++++S    ++    A
Sbjct: 174 ERKEVNVVHDQIGSPT------YAADLADAILELI--ERNSLTGIYHLSNSGPISKYEFA 225

Query: 228 RACAKAAGFPEPELVHYNPKEFDFGKK 254
           +  A A G P+ E+      E+    +
Sbjct: 226 KLIADALGLPDVEIKPITSSEYPLPAR 252

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 49/284 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GGT F+G  L + L++ G +V +  R ++   A +   E+  E          L+GD   
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60

Query: 61  YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
            +     LS       A   D V      YD      +A        E +L+    L+  
Sbjct: 61  PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 100 -FIYCSSAGVY-LKSDLLPHCETDTVDP------KSRHKGKLNTESVLESKGVNWTSLRP 151
            F Y S+A V   +   +   E +          +S+ + +    +   +  +  T  RP
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA--AATQIPLTVYRP 175

Query: 152 VYIYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
             + G              E    + L K GR +P+PG+      L  V  +A A V + 
Sbjct: 176 SIVVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
              +A+ Q+F+++     T   +A     A   P   ++  N  
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEP 277

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 140 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195
            + G+     R    YGP  +     P+   F      G+P+PI G G+ V    +V+D 
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222

Query: 196 ARAFVQVLGNEKASRQVFNISGE 218
           ARA   VL  +    +++NI G 
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGG 244

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 11/105 (10%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 192
           G +  S  P  +YGP +    E           FH  KA G P  +  GSG  + +  HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208

Query: 193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFP 237
            DLA A V ++     +  V N+     VT   LA    +  GF 
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVGFE 252

Length = 306

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 68/293 (23%), Positives = 96/293 (32%), Gaps = 97/293 (33%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L++ L K GH+VT+ TR   P A     E  + +A   +  L         
Sbjct: 5   GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
                    +G D V ++ G      EPI D                        A+   
Sbjct: 55  ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99

Query: 98  EQ----FIYCSSAGVYLKSDLLPHCETDTVDPK-------------SRHKGKLNTES--- 137
           EQ    FI  S+ G Y  S+   + E D+                 ++    L T     
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159

Query: 138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
               VL  KG     +   +  G                 G P+   GSG Q     H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200

Query: 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG----FPEPELV 242
           DL +  +  L N   S    N +  + V     A+A A+A      FP P  V
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFV 252

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 15/134 (11%)

Query: 116 PHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           P+ E D   P +   + KL  E  + +       LR  ++YG    N V+          
Sbjct: 110 PYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK-TMLRLAAER 168

Query: 175 RPIPIPGSGIQVT-QLG---HVKDLARAFVQVLG---NEKASRQVFNISGEKYVTFDGLA 227
             + +      V  QLG     +DLA A + ++       A    ++++G    ++   A
Sbjct: 169 DELRV------VDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFA 222

Query: 228 RACAKAAGFPEPEL 241
           RA    AG     +
Sbjct: 223 RAIFDEAGADGGRV 236

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
          GGT FIG  L+R L   GH+V + +R +   A+ L   
Sbjct: 6  GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199
           G+     R    YGP  Y   E+          AG+P+P+ G G QV    +V+D  RA 
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226

Query: 200 VQVLGNEKA-SRQVFNISGEKYVT 222
             VL  EK    + +NI G    T
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERT 248

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPL 158
            ++ S+  V+      P+ ETDT +P +   + KL  E  + + G     LR  ++YG  
Sbjct: 95  LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154

Query: 159 NYNPVEEWFFHRLKAGRPIPIP----GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
             N V+       K G+ + +     GS        + +DLA A +++L  EK    V++
Sbjct: 155 GNNFVK-TMLRLAKEGKELKVVDDQYGSPT------YTEDLADAILELLEKEKEGG-VYH 206

Query: 215 ISGEKYVTFDGLARACAKAAGFP 237
           +      ++   A+A  + AG  
Sbjct: 207 LVNSGECSWYEFAKAIFEEAGVD 229

Length = 281

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 34/242 (14%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T  +G  +   L+   G  VT+ TR  +         S  EF     K+  +  D   
Sbjct: 6   GATGTLGGPIVSALLASPGFTVTVLTRPSST--------SSNEFQPSGVKV--VPVDYAS 55

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP-ILDALPNLEQFIYCSSAGV--YLKSDL-LP 116
           ++ + ++L  KG D V    G  A   +  ++DA           +AGV  ++ S+  + 
Sbjct: 56  HESLVAAL--KGVDAVISALGGAAIGDQLKLIDA---------AIAAGVKRFIPSEFGVD 104

Query: 117 HCETDTVDPKSRHKGKLNTESVLESK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           +     +        K +    L +K  G+ WT    V     L+Y  +E  F     A 
Sbjct: 105 YDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTY---VSTGMFLDY-LLEPLFGVVDLAN 160

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKA 233
           R   I G G        ++D+ RA  + L + ++   +V  ++G+  VT + L     + 
Sbjct: 161 RTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAGD-VVTQNELIALVERV 219

Query: 234 AG 235
            G
Sbjct: 220 TG 221

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 42/270 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG++V +     +   + +  E + +   F      +K D  D 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
                 ++ K  D V+      D+     D   P +D                   +++ 
Sbjct: 60  ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK----GVNWTSLRPVYIY 155
           ++ SS+ VY ++ ++P  E     P S +   KL  E+++ +     G      R   I 
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 156 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
           GP + + V   F ++LK   P  + + G G Q     +V D   A +           +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232

Query: 214 NISGEKYVTFDGLARACAKAAGFPEPELVH 243
           N+  +  ++ + +A    +  G  +P   +
Sbjct: 233 NLGNDDTISVNEIAEIVIEELGL-KPRFKY 261

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 166 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISG 217
           +F      G+P+ I G G  QV  + H  DL   +++   N    + +VFNI G
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG 269

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 54/255 (21%), Positives = 94/255 (36%), Gaps = 55/255 (21%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            G T  IG  ++  L++ G  V    R     A           A   ++++   GD  D
Sbjct: 4   TGATGRIGSKVATTLLEAGRPVRALVRSDERAA---------ALAARGAEVV--VGDLDD 52

Query: 61  YDFVKSSLSAKGFDVVY---------DINGREADEVEPILDALPN--LEQFIYCSSAGVY 109
              + ++L   G D V+         D         E    AL    +++ +  SS G  
Sbjct: 53  PAVLAAAL--AGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSVGAD 110

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFH 169
            +S       +  +      +G    E VL   G+    LRP +         +E     
Sbjct: 111 PES------PSGLI------RGHWLMEQVLNWAGLPVVHLRPAWF--------MENLLSQ 150

Query: 170 R---LKAGR-PIPIPGSGIQVTQLGHV--KDLARAFVQVLGN-EKASRQVFNISGEKYVT 222
                KAG   +P PG G    +L  +   D+AR   ++L + E    +V+ ++G + +T
Sbjct: 151 APSIRKAGVLALPFPGDG----RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206

Query: 223 FDGLARACAKAAGFP 237
            + +A A ++  G P
Sbjct: 207 MNEIAAALSRVLGRP 221

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 2  GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
          GGT R +   L+  LV  GH+VTLF    ++  AP+   +P     +             
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75

Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
                  + +L+A  FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	287
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.98
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
CHL00194	317	ycf39 Ycf39; Provisional	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.97
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PRK05865	854	hypothetical protein; Provisional	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
PLN02778	298	3,5-epimerase/4-reductase	99.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PRK12320	699	hypothetical protein; Provisional	99.92
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.92
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.91
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.91
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.9
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.9
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.89
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.86
PLN02260	668	probable rhamnose biosynthetic enzyme	99.86
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.82
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.78
PRK06482	276	short chain dehydrogenase; Provisional	99.78
PRK09135	249	pteridine reductase; Provisional	99.75
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.75
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.74
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.74
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.74
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.73
PRK07806	248	short chain dehydrogenase; Provisional	99.72
PRK07774	250	short chain dehydrogenase; Provisional	99.71
COG2910	211	Putative NADH-flavin reductase [General function p	99.7
PRK08263	275	short chain dehydrogenase; Provisional	99.7
PRK05875	276	short chain dehydrogenase; Provisional	99.69
PRK07074	257	short chain dehydrogenase; Provisional	99.68
PRK07775	274	short chain dehydrogenase; Provisional	99.68
KOG2774	366	consensus NAD dependent epimerase [General functio	99.68
PRK07067	257	sorbitol dehydrogenase; Provisional	99.67
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12828	239	short chain dehydrogenase; Provisional	99.66
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.66
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK12746	254	short chain dehydrogenase; Provisional	99.66
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.66
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.65
PRK06914	280	short chain dehydrogenase; Provisional	99.65
PRK06180	277	short chain dehydrogenase; Provisional	99.65
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.65
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.64
PRK06138	252	short chain dehydrogenase; Provisional	99.64
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK09186	256	flagellin modification protein A; Provisional	99.63
PRK08219	227	short chain dehydrogenase; Provisional	99.62
PRK12827	249	short chain dehydrogenase; Provisional	99.62
PRK12829	264	short chain dehydrogenase; Provisional	99.62
PRK06128	300	oxidoreductase; Provisional	99.62
PRK06123	248	short chain dehydrogenase; Provisional	99.61
PRK06701	290	short chain dehydrogenase; Provisional	99.61
PRK05876	275	short chain dehydrogenase; Provisional	99.61
PRK06182	273	short chain dehydrogenase; Validated	99.61
PRK07890	258	short chain dehydrogenase; Provisional	99.61
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.6
PRK07060	245	short chain dehydrogenase; Provisional	99.6
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.6
PRK12939	250	short chain dehydrogenase; Provisional	99.59
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.59
PRK06194	287	hypothetical protein; Provisional	99.59
PRK06181	263	short chain dehydrogenase; Provisional	99.59
PRK12937	245	short chain dehydrogenase; Provisional	99.58
PRK08324	681	short chain dehydrogenase; Validated	99.57
PRK07577	234	short chain dehydrogenase; Provisional	99.57
PRK07041	230	short chain dehydrogenase; Provisional	99.57
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.57
PRK05993	277	short chain dehydrogenase; Provisional	99.57
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.56
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.56
PRK10538	248	malonic semialdehyde reductase; Provisional	99.54
PRK06500	249	short chain dehydrogenase; Provisional	99.54
PRK06841	255	short chain dehydrogenase; Provisional	99.54
PRK08628	258	short chain dehydrogenase; Provisional	99.54
PRK09134	258	short chain dehydrogenase; Provisional	99.54
PRK06196	315	oxidoreductase; Provisional	99.54
PRK09291	257	short chain dehydrogenase; Provisional	99.54
PRK05717	255	oxidoreductase; Validated	99.53
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.53
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.53
PRK08017	256	oxidoreductase; Provisional	99.53
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
PRK07326	237	short chain dehydrogenase; Provisional	99.52
PRK06523	260	short chain dehydrogenase; Provisional	99.52
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
PRK07069	251	short chain dehydrogenase; Validated	99.51
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.51
PRK07825	273	short chain dehydrogenase; Provisional	99.5
PRK06179	270	short chain dehydrogenase; Provisional	99.5
PLN02253	280	xanthoxin dehydrogenase	99.5
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.5
PRK07985	294	oxidoreductase; Provisional	99.5
PRK08643	256	acetoin reductase; Validated	99.49
PRK12744	257	short chain dehydrogenase; Provisional	99.49
PRK12743	256	oxidoreductase; Provisional	99.49
PRK06398	258	aldose dehydrogenase; Validated	99.49
PRK06114	254	short chain dehydrogenase; Provisional	99.49
PRK08264	238	short chain dehydrogenase; Validated	99.49
PRK05650	270	short chain dehydrogenase; Provisional	99.49
PRK07454	241	short chain dehydrogenase; Provisional	99.48
PRK06949	258	short chain dehydrogenase; Provisional	99.48
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.48
PRK06101	240	short chain dehydrogenase; Provisional	99.47
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.47
PRK07814	263	short chain dehydrogenase; Provisional	99.47
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.46
PRK07109	334	short chain dehydrogenase; Provisional	99.46
PRK08265	261	short chain dehydrogenase; Provisional	99.46
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.46
PRK07478	254	short chain dehydrogenase; Provisional	99.46
PRK12747	252	short chain dehydrogenase; Provisional	99.46
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.46
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
PRK07856	252	short chain dehydrogenase; Provisional	99.45
PRK12742	237	oxidoreductase; Provisional	99.45
PRK07024	257	short chain dehydrogenase; Provisional	99.45
PRK09242	257	tropinone reductase; Provisional	99.45
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.45
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.45
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.44
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.44
PRK07063	260	short chain dehydrogenase; Provisional	99.44
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.44
PRK06483	236	dihydromonapterin reductase; Provisional	99.43
PRK06198	260	short chain dehydrogenase; Provisional	99.43
PRK07035	252	short chain dehydrogenase; Provisional	99.43
PRK06172	253	short chain dehydrogenase; Provisional	99.43
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.43
PRK06057	255	short chain dehydrogenase; Provisional	99.43
PRK07102	243	short chain dehydrogenase; Provisional	99.42
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.42
PRK08339	263	short chain dehydrogenase; Provisional	99.41
PRK07677	252	short chain dehydrogenase; Provisional	99.4
PRK08226	263	short chain dehydrogenase; Provisional	99.4
PRK06197	306	short chain dehydrogenase; Provisional	99.4
PRK05867	253	short chain dehydrogenase; Provisional	99.4
PRK07576	264	short chain dehydrogenase; Provisional	99.39
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.39
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.39
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.39
PRK07904	253	short chain dehydrogenase; Provisional	99.39
PRK08589	272	short chain dehydrogenase; Validated	99.39
PRK08267	260	short chain dehydrogenase; Provisional	99.38
PRK05866	293	short chain dehydrogenase; Provisional	99.38
PRK07831	262	short chain dehydrogenase; Provisional	99.38
PRK08251	248	short chain dehydrogenase; Provisional	99.38
PRK05693	274	short chain dehydrogenase; Provisional	99.38
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.37
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.37
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.37
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.37
PRK08278	273	short chain dehydrogenase; Provisional	99.36
PRK07023	243	short chain dehydrogenase; Provisional	99.35
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.35
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.35
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.35
PRK06139	330	short chain dehydrogenase; Provisional	99.34
PRK07062	265	short chain dehydrogenase; Provisional	99.34
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.33
PRK06924	251	short chain dehydrogenase; Provisional	99.33
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.33
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.33
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.32
PRK06484	520	short chain dehydrogenase; Validated	99.32
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.3
PRK05872	296	short chain dehydrogenase; Provisional	99.3
PRK07201	657	short chain dehydrogenase; Provisional	99.29
PRK09072	263	short chain dehydrogenase; Provisional	99.27
PRK08177	225	short chain dehydrogenase; Provisional	99.26
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.26
PRK07832	272	short chain dehydrogenase; Provisional	99.25
PRK07578	199	short chain dehydrogenase; Provisional	99.25
PRK06940	275	short chain dehydrogenase; Provisional	99.25
PRK05854	313	short chain dehydrogenase; Provisional	99.24
PRK06125	259	short chain dehydrogenase; Provisional	99.24
PRK08703	239	short chain dehydrogenase; Provisional	99.24
PRK05884	223	short chain dehydrogenase; Provisional	99.24
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.24
PRK05855	582	short chain dehydrogenase; Validated	99.24
PRK06953	222	short chain dehydrogenase; Provisional	99.23
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.2
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.19
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.18
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.17
PRK07791	286	short chain dehydrogenase; Provisional	99.13
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.12
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.1
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.09
PRK12367	245	short chain dehydrogenase; Provisional	99.09
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.06
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.06
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.05
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.05
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.05
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.05
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.04
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.04
PRK06484	520	short chain dehydrogenase; Validated	99.04
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.04
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.02
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.0
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.0
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.99
PRK05599	246	hypothetical protein; Provisional	98.98
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.98
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.98
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.96
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.95
PLN02780	320	ketoreductase/ oxidoreductase	98.94
PLN00015	308	protochlorophyllide reductase	98.93
PRK08862	227	short chain dehydrogenase; Provisional	98.82
PRK08303	305	short chain dehydrogenase; Provisional	98.78
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.73
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.66
KOG0725	270	consensus Reductases with broad range of substrate	98.66
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.65
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.65
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.6
KOG1208	314	consensus Dehydrogenases with different specificit	98.59
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.55
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.48
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.46
PRK08309	177	short chain dehydrogenase; Provisional	98.42
PRK09620	229	hypothetical protein; Provisional	98.38
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.37
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.34
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.3
COG1028	251	FabG Dehydrogenases with different specificities (	98.18
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.17
PRK06720	169	hypothetical protein; Provisional	98.15
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.14
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.13
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.11
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.07
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.04
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.04
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.89
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.87
PTZ00325	321	malate dehydrogenase; Provisional	97.7
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.62
PLN00106	323	malate dehydrogenase	97.57
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.51
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.46
COG3268	382	Uncharacterized conserved protein [Function unknow	97.38
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.27
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.21
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.12
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.02
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	96.95
PRK14982	340	acyl-ACP reductase; Provisional	96.88
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.71
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	96.67
PRK05086	312	malate dehydrogenase; Provisional	96.62
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.61
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.49
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.37
PRK09496	453	trkA potassium transporter peripheral membrane com	96.32
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.28
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.28
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.28
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.11
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.08
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.96
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	95.92
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	95.72
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.67
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.58
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	95.57
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.56
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.56
PRK09496	453	trkA potassium transporter peripheral membrane com	95.52
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.46
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.41
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.36
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.23
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.2
PRK10669	558	putative cation:proton antiport protein; Provision	95.16
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.11
PRK04148	134	hypothetical protein; Provisional	95.06
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.84
PRK00048	257	dihydrodipicolinate reductase; Provisional	94.83
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.8
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.78
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.78
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.64
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.54
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.52
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	94.35
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.31
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	94.29
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	94.28
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.27
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.25
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	94.25
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.16
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	94.14
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.14
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.09
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	93.98
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.93
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	93.92
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	93.91
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	93.79
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	93.77
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	93.71
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.66
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.65
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	93.59
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	93.58
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	93.54
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.54
PLN02383	344	aspartate semialdehyde dehydrogenase	93.46
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.42
PRK08306	296	dipicolinate synthase subunit A; Reviewed	93.38
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	93.35
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.3
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	93.26
PRK08328	231	hypothetical protein; Provisional	93.24
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	93.14
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.13
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.13
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	93.13
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	93.08
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.02
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	92.99
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	92.94
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	92.92
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	92.83
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.78
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	92.72
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.61
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	92.55
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	92.41
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	92.3
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	92.28
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	92.22
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	92.2
PRK06436	303	glycerate dehydrogenase; Provisional	92.18
PRK08655	437	prephenate dehydrogenase; Provisional	92.18
PRK08223	287	hypothetical protein; Validated	92.15
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	92.05
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	92.02
PRK10537	393	voltage-gated potassium channel; Provisional	91.94
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	91.89
PRK03562	621	glutathione-regulated potassium-efflux system prot	91.83
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	91.8
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	91.74
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	91.71
PRK13243	333	glyoxylate reductase; Reviewed	91.71
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	91.7
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	91.65
PLN02494	477	adenosylhomocysteinase	91.58
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.58
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	91.53
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	91.42
PRK15116	268	sulfur acceptor protein CsdL; Provisional	91.4
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	91.34
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	91.34
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	91.33
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	91.33
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.3
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	91.21
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	91.17
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	91.14
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	91.13
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	91.12
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	91.12
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	91.07
PLN02928	347	oxidoreductase family protein	90.93
PTZ00075	476	Adenosylhomocysteinase; Provisional	90.77
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	90.75
PRK12480	330	D-lactate dehydrogenase; Provisional	90.72
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	90.7
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	90.7
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	90.69
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	90.54
PLN02586	360	probable cinnamyl alcohol dehydrogenase	90.48
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	90.37
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	90.28
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	90.23
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.19
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	90.18
KOG0409	327	consensus Predicted dehydrogenase [General functio	90.18
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	90.17
PRK05442	326	malate dehydrogenase; Provisional	89.94
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	89.91
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.88
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.87
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	89.82
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	89.81
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	89.78
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	89.68
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	89.59
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	89.53
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	89.51
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	89.36
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	89.33
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	89.32
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	89.3
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	89.25
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	89.2
PRK07574	385	formate dehydrogenase; Provisional	89.19
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	89.07
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	89.03
PTZ00354	334	alcohol dehydrogenase; Provisional	89.01
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	89.0
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	88.99
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	88.9
PRK06487	317	glycerate dehydrogenase; Provisional	88.85
PRK07411	390	hypothetical protein; Validated	88.84
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	88.82
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	88.75
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	88.69
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	88.63
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	88.61
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	88.59
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	88.57
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	88.54
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	88.51
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	88.41
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	88.27
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	88.24
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	87.98
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	87.95
PRK07417	279	arogenate dehydrogenase; Reviewed	87.77
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	87.74
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	87.58
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	87.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	87.15
PRK06849	389	hypothetical protein; Provisional	87.14
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	87.08
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.03
PLN02178	375	cinnamyl-alcohol dehydrogenase	86.98
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	86.98
PRK15059	292	tartronate semialdehyde reductase; Provisional	86.95
COG1255	129	Uncharacterized protein conserved in archaea [Func	86.87

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-41  Score=267.75  Aligned_cols=259  Identities=21%  Similarity=0.251  Sum_probs=209.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+|.+.+|++.|++|++++.-.....+.+..          ...+++++|+.|.+.+.++|++.++|+|||+|
T Consensus         6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            79999999999999999999999999866553333321          11689999999999999999999999999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +.                |+.++.+|+++|+  ++++|||.||+.|||.....|++|+.+..|.++| ++|++.|++++ 
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence            86                4567999999998  9999999999999999999999999999999998 99999999985 


Q ss_pred             ---hcCCcEEEEccCceecCCC----------CCchhHHHHHHHHcCC-CcccCC------CCCceeeeeeHHHHHHHHH
Q 023078          141 ---SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGR-PIPIPG------SGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~g~~~----------~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~~~Dva~~~~  200 (287)
                         .++++++++|..++.|.-.          ...+++...+...... .+.++|      ++...+|+||+.|+|++.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence               4689999999999999531          1234555554443333 355554      4566899999999999999


Q ss_pred             HHhcCC--cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhccc
Q 023078          201 QVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVK  277 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~  277 (287)
                      .+++.-  .....+||+++|...|.+|+++++.++.|++.|-.. .+ .         .++.... +.|++|++++|||+
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~-~~-R---------R~GDpa~l~Ad~~kA~~~Lgw~  304 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEI-AP-R---------RAGDPAILVADSSKARQILGWQ  304 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceee-CC-C---------CCCCCceeEeCHHHHHHHhCCC
Confidence            988642  223369999999999999999999999998763322 11 1         1111122 89999999999999


Q ss_pred             ccc
Q 023078          278 RSM  280 (287)
Q Consensus       278 p~~  280 (287)
                      |.+
T Consensus       305 p~~  307 (329)
T COG1087         305 PTY  307 (329)
T ss_pred             ccc
Confidence            987

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.6e-40  Score=260.58  Aligned_cols=263  Identities=21%  Similarity=0.242  Sum_probs=218.8

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||.||||+++++.++++.  .+|+.++.=.=  ...+.   ........++..++++|+.|.+.+.+++++.++|+|+|
T Consensus         6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY--Agn~~---~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY--AGNLE---NLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             ecCcchHHHHHHHHHHhcCCCceEEEEecccc--cCCHH---HHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            7999999999999999985  45666665210  00000   00111124689999999999999999999888999999


Q ss_pred             ccCC----------------CccchHHHHHhCC--CC-CcEEEEeeeeEeecCCCC--CCCCCCCCCCCccc-cchHHHH
Q 023078           79 INGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        79 ~a~~----------------~~~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~--~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      +|+.                |+.++.+++++++  .. -||+|+||..|||.-...  .++|+++..|.++| .||+.+.
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            9986                4568999999988  33 499999999999975443  68999999999999 9999988


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      .+++    .+|++++|.|+++-|||.+. ..+++.++.....|++++++|++.+.+||+|++|-++++..++++.. .|+
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~-~GE  239 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK-IGE  239 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc-CCc
Confidence            8774    57999999999999999975 56788889999999999999999999999999999999999999977 599


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCe----EEEcCCCCcCCCCcccccccccc-ccchhhHhhhhccccc
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPE----LVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRS  279 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~  279 (287)
                      +|||+++...+-.|+++.|.+.+|+..+.    +.+...          .|+.+.+ .+|.+|+.++|||.|.
T Consensus       240 ~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~D----------RpGHD~RYaid~~Ki~~eLgW~P~  302 (340)
T COG1088         240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVED----------RPGHDRRYAIDASKIKRELGWRPQ  302 (340)
T ss_pred             eEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccC----------CCCCccceeechHHHhhhcCCCcC
Confidence            99999999999999999999999988764    444322          3445555 8999999999999994

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=6.1e-40  Score=279.51  Aligned_cols=273  Identities=17%  Similarity=0.156  Sum_probs=206.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|........+.............+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA   98 (348)
T PRK15181         21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA   98 (348)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence            799999999999999999999999998654321111100000000001367899999999999999998  899999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +.                |..++.+++++|+  ++++|||+||..+||.....+..|+.+..|.+.| .+|.++|.+++ 
T Consensus        99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181         99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence            85                2345789999987  8899999999999997655566777777788888 99999999874 


Q ss_pred             ---hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc--CCC
Q 023078          141 ---SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  210 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~  210 (287)
                         +++++++++||+++|||++..     .+++.++.++..++++.+++++.+.++|+|++|+|++++.++....  ..+
T Consensus       179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  258 (348)
T PRK15181        179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258 (348)
T ss_pred             HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence               458999999999999997532     3567777778888888888899999999999999999988775432  256


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ++||+++++++|++|+++.+.+.++.......   .........+  +..... .+|++|++++|||+|..
T Consensus       259 ~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~d~~k~~~~lGw~P~~  324 (348)
T PRK15181        259 KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS---RAEPIYKDFR--DGDVKHSQADITKIKTFLSYEPEF  324 (348)
T ss_pred             CEEEecCCCcEeHHHHHHHHHHHhCccccccc---CCCcccCCCC--CCcccccccCHHHHHHHhCCCCCC
Confidence            89999999999999999999999984321100   0000011111  111112 78999999999999975

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=3.2e-38  Score=271.77  Aligned_cols=271  Identities=58%  Similarity=0.963  Sum_probs=212.3

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||||++|++.|+++||+|++++|+.... ..+.......+... ..+++++.+|+.|   +.+++...++|+|||++
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~  138 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPS-QKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN  138 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcch-hhhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence            9999999999999999999999999987542 11211101111111 2368899999976   44444434899999999


Q ss_pred             CCCccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEccCceecCC
Q 023078           81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~~~v~g~~  158 (287)
                      +.....+.+++++++  ++++|||+||.++|+.....+..|+....|..   +|..+|.++++.+++++++||+++|||.
T Consensus       139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence            988888999999987  89999999999999876555666665554443   8999999999999999999999999997


Q ss_pred             CCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      ....+..+++.++..++++.+++++.+.++++|++|+|+++..+++++...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            65556677788888888887778888999999999999999999988655678999999999999999999999999876


Q ss_pred             CeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          239 PELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                       .+...++..+.++.....+..... ..|++|++++|||+|..
T Consensus       296 -~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~  337 (378)
T PLN00016        296 -EIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKF  337 (378)
T ss_pred             -ceeecCccccCccccccccccccccccCHHHHHHhcCCCCCC
Confidence             555555444333322223333333 67999999999999974

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.3e-36  Score=261.26  Aligned_cols=272  Identities=18%  Similarity=0.164  Sum_probs=193.7

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++ |++|++++|+..+........    ......+++++.+|++|.+.+.++++  ++|+|||+
T Consensus        20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~----~~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl   93 (386)
T PLN02427         20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD----TVPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL   93 (386)
T ss_pred             ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc----cccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence            799999999999999998 599999998765422111100    00012468999999999999999998  89999999


Q ss_pred             cCCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCC-------------------
Q 023078           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------------------  123 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-------------------  123 (287)
                      |+..                ..++.+++++|+ ..++|||+||..+||.....+..|+.+.                   
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~  173 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG  173 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence            9741                224667788876 3489999999999986432222222110                   


Q ss_pred             ---CCCccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCC------------CchhHHHHHHHHcCCCcccCCCC
Q 023078          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG  183 (287)
Q Consensus       124 ---~p~~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  183 (287)
                         .|.+.| .+|..+|+++.    ..+++++++||+++|||++.            ..++..+...+.+++++.+++++
T Consensus       174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  253 (386)
T PLN02427        174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG  253 (386)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence               233456 99999999885    35899999999999999742            12344455677778887777888


Q ss_pred             CceeeeeeHHHHHHHHHHHhcCCc-CCCceEEeeCC-CcccHHHHHHHHHHHhCCCCCe----EEEcCCCCcCCCCcccc
Q 023078          184 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPE----LVHYNPKEFDFGKKKAF  257 (287)
Q Consensus       184 ~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~~~~~~~-~~~s~~~i~~~i~~~~g~~~~~----~~~~~~~~~~~~~~~~~  257 (287)
                      ++.++|+|++|+|++++.+++++. ..+++||++++ +.+|++|+++.+.+.+|.....    ...+...........  
T Consensus       254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--  331 (386)
T PLN02427        254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEG--  331 (386)
T ss_pred             CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccccCcc--
Confidence            889999999999999999998753 35679999987 5899999999999999853111    000000000000000  


Q ss_pred             cccccc-ccchhhHhhhhcccccc
Q 023078          258 PFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       258 ~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ...... ..|++|++++|||+|..
T Consensus       332 ~~~~~~~~~d~~k~~~~lGw~p~~  355 (386)
T PLN02427        332 YDDSDKRIPDMTIINKQLGWNPKT  355 (386)
T ss_pred             ccchhhccCCHHHHHHhcCCCcCc
Confidence            011112 77999999999999976

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1e-35  Score=253.90  Aligned_cols=267  Identities=17%  Similarity=0.219  Sum_probs=197.5

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC-ChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|++. |++|++++|+.........          ..+++++.+|+. +.+.+.++++  ++|+|||
T Consensus         7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH   74 (347)
T PRK11908          7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP   74 (347)
T ss_pred             ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999986 6999999987544222221          246889999997 6777888888  8999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCC-------CCCccc-cchH
Q 023078           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-------~p~~~~-~~k~  133 (287)
                      +|+..                ..++.+++++|+ ..++|||+||..+||.....+++|+...       .|.+.| .+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            98752                234678899887 3379999999999996544455555421       355567 9999


Q ss_pred             HHHHHHH----hcCCcEEEEccCceecCCCC---------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilr~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|.++.    +.+++++++||+++|||+..         ..++..++..+..++++.+.+++++.++|+|++|+++++.
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            9998874    46899999999999999742         2356677888888888777778889999999999999999


Q ss_pred             HHhcCCc--CCCceEEeeCC-CcccHHHHHHHHHHHhCCCCCeEEEc--CCCCcCCCCcccc---cccccc-ccchhhHh
Q 023078          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPELVHY--NPKEFDFGKKKAF---PFRDQV-IASLKTAF  271 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~-~~~s~~~i~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~-~~~~~k~~  271 (287)
                      .+++++.  ..+++||++++ ..+|++|+++.+.+.+|... .+...  +............   ...... ..|++|++
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  313 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP-EYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTM  313 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc-cccccccccccccCCchhccCcCcchhccccCChHHHH
Confidence            9998753  35789999987 47999999999999999542 22100  0000000000000   001112 56899999


Q ss_pred             hhhcccccc
Q 023078          272 SVNMVKRSM  280 (287)
Q Consensus       272 ~~lg~~p~~  280 (287)
                      ++|||+|..
T Consensus       314 ~~lGw~p~~  322 (347)
T PRK11908        314 QELGWAPKT  322 (347)
T ss_pred             HHcCCCCCC
Confidence            999999974

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.4e-36  Score=255.15  Aligned_cols=278  Identities=16%  Similarity=0.133  Sum_probs=201.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|++.|+++|++|++++|+.... ...+.............+++++.+|++|.+.+.++++..++|+|||+
T Consensus         6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~   85 (343)
T TIGR01472         6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNL   85 (343)
T ss_pred             EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEEC
Confidence            79999999999999999999999999986421 01111000000000024688999999999999999986678999999


Q ss_pred             cCCC----------------ccchHHHHHhCC--CC---CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~--~~---~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      |+..                ..++.+++++|+  ++   ++|||+||..+||.....+.+|+.+..|.+.| .+|.++|.
T Consensus        86 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  165 (343)
T TIGR01472        86 AAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHW  165 (343)
T ss_pred             CcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            9862                225678888876  44   38999999999997655567888888888888 99999999


Q ss_pred             HHH----hcCCcEEEEccCceecCCCCCc----hhHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          138 VLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilr~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      +++    +.++++++.|+.++|||+....    .+..++..+..+++ ..+++++++.++|+|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~-  244 (343)
T TIGR01472       166 ITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK-  244 (343)
T ss_pred             HHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC-
Confidence            884    4588999999999999964332    23334555666653 3455888999999999999999999988653 


Q ss_pred             CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeE------EEcCCC----CcCCCCcccccccccc-ccchhhHhhhhccc
Q 023078          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPEL------VHYNPK----EFDFGKKKAFPFRDQV-IASLKTAFSVNMVK  277 (287)
Q Consensus       209 ~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~  277 (287)
                       ++.||+++++++|++|+++.+.+.+|++.+..      ...+..    ...+......+..... ..|++|++++|||+
T Consensus       245 -~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~  323 (343)
T TIGR01472       245 -PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWK  323 (343)
T ss_pred             -CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCC
Confidence             35899999999999999999999999653110      000000    0011111111222222 67999999999999


Q ss_pred             ccc
Q 023078          278 RSM  280 (287)
Q Consensus       278 p~~  280 (287)
                      |..
T Consensus       324 p~~  326 (343)
T TIGR01472       324 PEV  326 (343)
T ss_pred             CCC
Confidence            975

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.3e-35  Score=258.79  Aligned_cols=268  Identities=18%  Similarity=0.224  Sum_probs=194.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc------cCCC-----CCchhhhh-hcCCcEEEEecCCChHHHHhhh
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPG-----ESDQEFAE-FSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~------~~~~-----~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~   68 (287)
                      |||+||||++|++.|+++|++|++++|......+      .+..     .....+.. ...+++++.+|++|.+.+.+++
T Consensus        53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l  132 (442)
T PLN02572         53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF  132 (442)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence            7999999999999999999999998764321100      0000     00000000 1236899999999999999999


Q ss_pred             ccCCccEEEEccCC-------------------CccchHHHHHhCC--CCC-cEEEEeeeeEeecCCCCCCCC-------
Q 023078           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCE-------  119 (287)
Q Consensus        69 ~~~~~d~vi~~a~~-------------------~~~~~~~l~~a~~--~~~-~~i~~Ss~~~y~~~~~~~~~e-------  119 (287)
                      +..++|+|||+|+.                   |..++.+++++++  +++ +||++||..+||... .+.+|       
T Consensus       133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~  211 (442)
T PLN02572        133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITH  211 (442)
T ss_pred             HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCccccccccc
Confidence            86679999999864                   2235777888887  675 899999999998542 12221       


Q ss_pred             ----C---CCCCCCccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCCC------------------chhHHHHH
Q 023078          120 ----T---DTVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH  169 (287)
Q Consensus       120 ----~---~~~~p~~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~------------------~~~~~~~~  169 (287)
                          +   .+..|.+.| .+|.++|.+++    .++++++++|++++|||++..                  .++..++.
T Consensus       212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~  291 (442)
T PLN02572        212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV  291 (442)
T ss_pred             ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence                2   144666778 99999998874    459999999999999997532                  23445566


Q ss_pred             HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC--ceEEeeCCCcccHHHHHHHHHHH---hCCCCCeEEEc
Q 023078          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKA---AGFPEPELVHY  244 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~i~~~i~~~---~g~~~~~~~~~  244 (287)
                      ++..++++.+++++++.++|+|++|+|++++.++++....+  .+||+++ ..+|++|+++.+.+.   +|.+. .+...
T Consensus       292 ~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~-~~~~~  369 (442)
T PLN02572        292 QAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDV-EVISV  369 (442)
T ss_pred             HHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCC-CeeeC
Confidence            77778888788899999999999999999999998643233  5899976 579999999999999   88664 33333


Q ss_pred             CCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          245 NPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +....        ...... ..|++|+++ |||+|..
T Consensus       370 p~~~~--------~~~~~~~~~d~~k~~~-LGw~p~~  397 (442)
T PLN02572        370 PNPRV--------EAEEHYYNAKHTKLCE-LGLEPHL  397 (442)
T ss_pred             CCCcc--------cccccccCccHHHHHH-cCCCCCC
Confidence            32210        000111 578999974 9999975

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6e-36  Score=232.97  Aligned_cols=269  Identities=22%  Similarity=0.273  Sum_probs=214.0

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||.||||++.+..+...  .++.+.++.-.--. ...+.      -....++..++++|+.+...+...+....+|.|+
T Consensus        12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~------~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen   12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLE------PVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhh------hhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            799999999999999986  46666655421110 11111      1112478999999999999999999988999999


Q ss_pred             EccCC----------------CccchHHHHHhCC---CCCcEEEEeeeeEeecCCCCCCC-CCCCCCCCccc-cchHHHH
Q 023078           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        78 ~~a~~----------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~-e~~~~~p~~~~-~~k~~~E  136 (287)
                      |+|+.                |+-++..++++++   ++++|||+||..|||........ |.+...|.++| ++|.++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99986                3446788999987   78999999999999987766655 88999999999 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      ..++    +++++++++|.++||||.+. ...++.|+.....+++.++.|++.+.++|+|++|+++++..++++.. .|+
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-ccc
Confidence            9885    57899999999999999875 35677788878888999999999999999999999999999999844 799


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccce
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSML  281 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~~  281 (287)
                      +|||++..+.+..|+++.+.+.+.+..+.+.. ++......   ..|..+.+ .+|++|++ .|||+|...
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~-~p~~~~v~---dRp~nd~Ry~~~~eKik-~LGw~~~~p  310 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEKRLPNIDT-EPFIFFVE---DRPYNDLRYFLDDEKIK-KLGWRPTTP  310 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHHhccCCCC-CCcceecC---CCCcccccccccHHHHH-hcCCcccCc
Confidence            99999999999999999999999986643221 11111111   12333444 89999999 799999764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=3.8e-35  Score=251.29  Aligned_cols=272  Identities=18%  Similarity=0.159  Sum_probs=199.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++++++.++..........   ... ....+++++.+|++|.+.+.++++..++|+|||+|
T Consensus         7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   82 (355)
T PRK10217          7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL---APV-AQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA   82 (355)
T ss_pred             EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh---hhc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999998766544432211110000   000 00235788899999999999999865699999999


Q ss_pred             CCC----------------ccchHHHHHhCC-----------CCCcEEEEeeeeEeecCC--CCCCCCCCCCCCCccc-c
Q 023078           81 GRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD--LLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-----------~~~~~i~~Ss~~~y~~~~--~~~~~e~~~~~p~~~~-~  130 (287)
                      +..                ..++.++++++.           ++++||++||.++||...  ..+++|+.+..|.+.| .
T Consensus        83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~  162 (355)
T PRK10217         83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA  162 (355)
T ss_pred             cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence            862                234677777763           357999999999998532  3457888777788888 9


Q ss_pred             chHHHHHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      +|.++|.+++    +.+++++++||+++|||++. ..+++.++.+...++++.+++++++.++|+|++|+++++..+++.
T Consensus       163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            9999998874    46899999999999999863 345666777777787777778899999999999999999999887


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCC----CCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP----KEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      .. .+++||+++++++|++|+++.+.+.+|...+.. ..+.    ..+....  ..+..... .+|++|++++|||+|..
T Consensus       243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~k~~~~lg~~p~~  318 (355)
T PRK10217        243 GK-VGETYNIGGHNERKNLDVVETICELLEELAPNK-PQGVAHYRDLITFVA--DRPGHDLRYAIDASKIARELGWLPQE  318 (355)
T ss_pred             CC-CCCeEEeCCCCcccHHHHHHHHHHHhccccccc-ccccccccccceecC--CCCCCCcccccCHHHHHHhcCCCCcC
Confidence            54 568999999999999999999999998643211 1100    0011110  11111112 78999999999999974

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=3.5e-35  Score=251.67  Aligned_cols=254  Identities=18%  Similarity=0.183  Sum_probs=195.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++||+|++++|.........           ...++++.+|+.+.+.+..+++  ++|+|||+|
T Consensus        27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   93 (370)
T PLN02695         27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA   93 (370)
T ss_pred             ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence            799999999999999999999999998653211100           1135788999999999888887  899999999


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCC----CCCCCCC--CCCCCccc-cchHH
Q 023078           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN  134 (287)
Q Consensus        81 ~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~----~~~~e~~--~~~p~~~~-~~k~~  134 (287)
                      +..                 ..++.+++++|+  ++++|||+||..+|+....    .++.|+.  +..|.+.| .+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            642                 224678889886  7899999999999986432    2355544  55677778 99999


Q ss_pred             HHHHHH----hcCCcEEEEccCceecCCCC-----CchhHHHHHHHHc-CCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      +|+++.    +.+++++++||+++|||++.     ..+...++..+.. +.++.+++++++.++|+|++|+++++..+++
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            999864    46899999999999999642     1234456655544 4677778889999999999999999999877


Q ss_pred             CCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ..  .++.||+++++.+|++|+++.+.+..|.+. .+...+....          ......|++|++++|||+|..
T Consensus       254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~i~~~~~~~~----------~~~~~~d~sk~~~~lgw~p~~  316 (370)
T PLN02695        254 SD--FREPVNIGSDEMVSMNEMAEIALSFENKKL-PIKHIPGPEG----------VRGRNSDNTLIKEKLGWAPTM  316 (370)
T ss_pred             cc--CCCceEecCCCceeHHHHHHHHHHHhCCCC-CceecCCCCC----------ccccccCHHHHHHhcCCCCCC
Confidence            64  357899999999999999999999999765 3333322110          011157999999999999974

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=2.5e-35  Score=246.02  Aligned_cols=249  Identities=17%  Similarity=0.143  Sum_probs=191.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++| +|++++|...                      .+.+|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999 7998887521                      1357999999999999866799999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                ..++.+++++|+ ...+|||+||..|||+....+++|+.+..|.+.| .+|..+|++++..
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            863                224678889887 2248999999999988766688999998999888 9999999999887


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCC--CCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~  220 (287)
                      ..+++++|++++|||++ ..++..+++.+.+++++.++++  +...+.+.+.+|++.++..++.... .+++||+++++.
T Consensus       143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~~~~  220 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVASGT  220 (299)
T ss_pred             CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEeeCCCC
Confidence            78899999999999975 3556777888778887777666  4444455667778888887776543 346999999999


Q ss_pred             ccHHHHHHHHHHHh---CCCCC--eEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhccccc
Q 023078          221 VTFDGLARACAKAA---GFPEP--ELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRS  279 (287)
Q Consensus       221 ~s~~~i~~~i~~~~---g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~  279 (287)
                      +|+.|+++.+.+..   |.+.+  .+...+...+..     ...++.+ .+|++|+++.|||+|.
T Consensus       221 ~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~-----~~~rp~~~~ld~~k~~~~lg~~~~  280 (299)
T PRK09987        221 TTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPT-----PARRPHNSRLNTEKFQQNFALVLP  280 (299)
T ss_pred             ccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCC-----CCCCCCcccCCHHHHHHHhCCCCc
Confidence            99999999998764   43321  233332221110     0112223 7899999999999975

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3e-35  Score=255.51  Aligned_cols=254  Identities=19%  Similarity=0.204  Sum_probs=194.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|...........     .. ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus       126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-----~~-~~~~~~~~~~Di~~~~-----~~--~~D~ViHlA  192 (436)
T PLN02166        126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-----LF-GNPRFELIRHDVVEPI-----LL--EVDQIYHLA  192 (436)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-----hc-cCCceEEEECcccccc-----cc--CCCEEEECc
Confidence            79999999999999999999999999864321111100     00 0246778888886542     34  799999999


Q ss_pred             CC----------------CccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCC-----CCCCCccc-cchHHHHH
Q 023078           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~-----~~~p~~~~-~~k~~~E~  137 (287)
                      +.                |+.++.+++++|+ ...+||++||..+||.....+.+|+.     +..|.+.| .+|..+|+
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            74                2335788999987 23489999999999976555666653     44556667 99999999


Q ss_pred             HHH----hcCCcEEEEccCceecCCCC---CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~----~~~~~~~ilr~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                      ++.    +.+++++++|++++|||++.   ..++..++.++.+++++.+++++++.++|+|++|+++++..+++...  +
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~  350 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V  350 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence            874    45899999999999999742   35566788888888888888888999999999999999999987543  4


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ++||+++++.+|++|+++.+.+.+|.+. .+...+...          ..... .+|++|++++|||+|..
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~~-~i~~~p~~~----------~~~~~~~~d~~Ka~~~LGw~P~~  410 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSSA-TIEFKPNTA----------DDPHKRKPDISKAKELLNWEPKI  410 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCCC-CeeeCCCCC----------CCccccccCHHHHHHHcCCCCCC
Confidence            6999999999999999999999999764 333322111          00111 67999999999999964

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=5.8e-35  Score=267.21  Aligned_cols=267  Identities=18%  Similarity=0.178  Sum_probs=199.0

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHH-HHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++ ||+|++++|..........          ..+++++.+|++|... +.++++  ++|+|||
T Consensus       321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH  388 (660)
T PRK08125        321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP  388 (660)
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence            799999999999999986 7999999997654221111          2468899999998655 567787  8999999


Q ss_pred             ccCC----------------CccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCC-------CCCccc-cchH
Q 023078           79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~----------------~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-------~p~~~~-~~k~  133 (287)
                      +|+.                |..++.+++++|+ ..++|||+||..+||.....+.+|+.+.       .|.+.| .+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            9874                2345778899987 3389999999999996544456676532       234457 9999


Q ss_pred             HHHHHHH----hcCCcEEEEccCceecCCCC---------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilr~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      ++|.+++    +++++++++||+++|||++.         ..++..++..+.+++++.+++++++.++|+|++|++++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999884    46899999999999999753         2456677778888888777788899999999999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC-cccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCC--cccc----ccccccccchhhHh
Q 023078          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGK--KKAF----PFRDQVIASLKTAF  271 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~-~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~k~~  271 (287)
                      .++++..  ..+++||+++++ .+|++|+++.+.+.+|.+...+ ..+........  ....    .......+|++|++
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~  627 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRD-HFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAR  627 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccc-cCCccccccccccccccccccccccccCCChHHHH
Confidence            9998743  346799999985 6999999999999999643221 22221100000  0000    00111167999999


Q ss_pred             hhhcccccc
Q 023078          272 SVNMVKRSM  280 (287)
Q Consensus       272 ~~lg~~p~~  280 (287)
                      ++|||+|..
T Consensus       628 ~~LGw~P~~  636 (660)
T PRK08125        628 RLLDWEPKI  636 (660)
T ss_pred             HHhCCCCCC
Confidence            999999974

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.1e-34  Score=247.02  Aligned_cols=269  Identities=19%  Similarity=0.157  Sum_probs=199.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+||||++|++.|+++|++|++++|+++... ..+... .........+++++.+|++|.+.+.++++..++|+|||+
T Consensus        12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~   90 (340)
T PLN02653         12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHI-YIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL   90 (340)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhh-ccccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence            799999999999999999999999998754311 111100 000000124588999999999999999986678999999


Q ss_pred             cCCC----------------ccchHHHHHhCC--CCC-----cEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHH
Q 023078           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~--~~~-----~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~  135 (287)
                      |+..                ..++.+++++++  +++     +||++||..+||.... +.+|+.+..|.+.| .+|.++
T Consensus        91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~  169 (340)
T PLN02653         91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA  169 (340)
T ss_pred             CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence            9862                224677888876  443     8999999999997654 67888888888888 999999


Q ss_pred             HHHHH----hcCCcEEEEccCceecCCCCCch----hHHHHHHHHcCCCccc-CCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       136 E~~~~----~~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      |.+++    ++++.++..|+.++|||+....+    +..++.++..+....+ .+++++.++|+|++|+|++++.++++.
T Consensus       170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            99874    45788899999999999643333    2333455566665443 488899999999999999999999875


Q ss_pred             cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      .  ++.||+++++++|++|+++.+.+.+|.+......+....       ..+..... .+|++|++++|||+|..
T Consensus       250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lgw~p~~  315 (340)
T PLN02653        250 K--PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRY-------FRPAEVDNLKGDASKAREVLGWKPKV  315 (340)
T ss_pred             C--CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCccc-------CCccccccccCCHHHHHHHhCCCCCC
Confidence            3  468999999999999999999999996421111111111       11111222 67999999999999985

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=9e-35  Score=252.94  Aligned_cols=254  Identities=19%  Similarity=0.205  Sum_probs=192.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|......+....      .....+++++.+|+.+..     +.  ++|+|||+|
T Consensus       125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~------~~~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA  191 (442)
T PLN02206        125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH------HFSNPNFELIRHDVVEPI-----LL--EVDQIYHLA  191 (442)
T ss_pred             ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh------hccCCceEEEECCccChh-----hc--CCCEEEEee
Confidence            79999999999999999999999998753321111100      001246788889987652     34  799999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC-----CCCCCccc-cchHHHH
Q 023078           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTE  136 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~-----~~~p~~~~-~~k~~~E  136 (287)
                      +.                |..++.+++++|+  + .+||++||..+||.....+.+|+.     +..+.+.| .+|.++|
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE  270 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE  270 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence            74                2335788999987  5 489999999999876555566653     33345567 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCC---CCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      +++.    +.+++++++|++++|||+.   ...++..++.....++++.+++++++.++|+|++|+|+++..++++..  
T Consensus       271 ~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--  348 (442)
T PLN02206        271 TLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--  348 (442)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--
Confidence            9874    4689999999999999974   335566777788888888888888999999999999999999887643  


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++.||++++.++|++|+++.+.+.+|.+. .+...+....       .+  ....+|++|++++|||+|.+
T Consensus       349 ~g~yNIgs~~~~sl~Elae~i~~~~g~~~-~i~~~p~~~~-------~~--~~~~~d~sKa~~~LGw~P~~  409 (442)
T PLN02206        349 VGPFNLGNPGEFTMLELAKVVQETIDPNA-KIEFRPNTED-------DP--HKRKPDITKAKELLGWEPKV  409 (442)
T ss_pred             CceEEEcCCCceeHHHHHHHHHHHhCCCC-ceeeCCCCCC-------Cc--cccccCHHHHHHHcCCCCCC
Confidence            45899999999999999999999998654 4433222110       00  11168999999999999964

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3e-34  Score=244.96  Aligned_cols=265  Identities=14%  Similarity=0.148  Sum_probs=199.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+++++.|+++|++|++++|+.........      ......+++++.+|+++.+.+.++++..++|+|||++
T Consensus        10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622        10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE------LLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH------HHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            7999999999999999999999999987654221100      0011235778999999999999999866789999999


Q ss_pred             CC----------------CccchHHHHHhCC--C-CCcEEEEeeeeEeecCCC-CCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~-~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +.                |..++.+++++++  + +++||++||..+|+.... .+.+|+.+..|.+.| .+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            85                2235677888876  4 789999999999986432 346677777787878 9999999887


Q ss_pred             Hh-----------cCCcEEEEccCceecCCCC--CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          140 ES-----------KGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       140 ~~-----------~~~~~~ilr~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      +.           .+++++++||+++|||++.  ..+++.+++....++++.+ +++++.++|+|++|++++++.++++.
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~  242 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL  242 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence            43           2899999999999999742  3567788888888887765 56788999999999999999887642


Q ss_pred             ----cCCCceEEeeCC--CcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhccccc
Q 023078          207 ----KASRQVFNISGE--KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRS  279 (287)
Q Consensus       207 ----~~~~~~~~~~~~--~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~  279 (287)
                          ...++.||++++  ++++..++++.+.+.++.....+...+ ...       .+..... .+|++|++++|||+|.
T Consensus       243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~d~~k~~~~lgw~p~  314 (349)
T TIGR02622       243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDS-DLN-------HPHEARLLKLDSSKARTLLGWHPR  314 (349)
T ss_pred             hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeecc-CCC-------CCcccceeecCHHHHHHHhCCCCC
Confidence                123579999975  679999999999988764321222211 100       1111111 6899999999999998


Q ss_pred             c
Q 023078          280 M  280 (287)
Q Consensus       280 ~  280 (287)
                      +
T Consensus       315 ~  315 (349)
T TIGR02622       315 W  315 (349)
T ss_pred             C
Confidence            5

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.3e-34  Score=237.92  Aligned_cols=232  Identities=24%  Similarity=0.363  Sum_probs=182.1

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccc-cCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||+||||++|+++|+++|  ++|+++++.+..... ...         .....+++.+|++|.+++.++++  ++|+||
T Consensus         3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~---------~~~~~~~~~~Di~d~~~l~~a~~--g~d~V~   71 (280)
T PF01073_consen    3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQ---------KSGVKEYIQGDITDPESLEEALE--GVDVVF   71 (280)
T ss_pred             EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhh---------cccceeEEEeccccHHHHHHHhc--CCceEE
Confidence            7999999999999999999  799999987765321 111         01233499999999999999999  999999


Q ss_pred             EccCC---------------CccchHHHHHhCC--CCCcEEEEeeeeEeec-CCCCC---CCCCCCC--CCCccc-cchH
Q 023078           78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLP---HCETDTV--DPKSRH-KGKL  133 (287)
Q Consensus        78 ~~a~~---------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~-~~~~~---~~e~~~~--~p~~~~-~~k~  133 (287)
                      |+|+.               |+.++++++++|+  +++||||+||.++++. ....+   .+|+.+.  .+.+.| .+|.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            99875               4568999999988  9999999999999886 21222   2344332  234457 9999


Q ss_pred             HHHHHHHh-c--------CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          134 NTESVLES-K--------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       134 ~~E~~~~~-~--------~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      .+|+++.+ .        .+..++|||+.||||++.. +.+.+......+......+++....+++|++|+|.+++.+++
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            99998743 1        3889999999999997533 345566666676555556778889999999999999988765


Q ss_pred             C-------CcCCCceEEeeCCCccc-HHHHHHHHHHHhCCCCCeEEEc
Q 023078          205 N-------EKASRQVFNISGEKYVT-FDGLARACAKAAGFPEPELVHY  244 (287)
Q Consensus       205 ~-------~~~~~~~~~~~~~~~~s-~~~i~~~i~~~~g~~~~~~~~~  244 (287)
                      +       ....|+.|++++++++. +++++..+.+.+|.+.+...++
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~l  278 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISL  278 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCC
Confidence            2       23478999999999998 9999999999999998664443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.5e-34  Score=240.67  Aligned_cols=246  Identities=19%  Similarity=0.174  Sum_probs=193.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|+++++.|+++|++|++++|+                          .+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            6999999999999999999999999884                          35788999999999866679999999


Q ss_pred             CCCc----------------cchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +...                .++.+++++++ ...+||++||..+|+.....+++|+.+..|.+.| .+|..+|++++..
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            8521                23677788876 2248999999999987666678888888888888 9999999999888


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +.+++++||+.+||+.....+...++..+..+.++.+.+  ++.++++|++|+|+++..+++.+...+++||+++++.+|
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS  216 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence            999999999999999754556666777777776665544  356899999999999999998764457899999999999


Q ss_pred             HHHHHHHHHHHhCCCCCe-----EEEcCCCCcCCCCcccccccccc-ccchhhHhhhhccccc
Q 023078          223 FDGLARACAKAAGFPEPE-----LVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRS  279 (287)
Q Consensus       223 ~~~i~~~i~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~  279 (287)
                      +.|+++.+.+.+|.+...     +.......+  ..   ....... .+|++|++++|||++.
T Consensus       217 ~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~d~~~~~~~lg~~~~  274 (287)
T TIGR01214       217 WYEFAQAIFEEAGADGLLLHPQEVKPISSKEY--PR---PARRPAYSVLDNTKLVKTLGTPLP  274 (287)
T ss_pred             HHHHHHHHHHHhCcccccccCceeEeecHHHc--CC---CCCCCCccccchHHHHHHcCCCCc
Confidence            999999999999976421     111111100  00   0111112 7899999999999654

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.1e-33  Score=238.67  Aligned_cols=263  Identities=21%  Similarity=0.253  Sum_probs=200.6

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||||+||++++++|+++|  ++|++++|..... ...+.     .+. ...+++++.+|++|++++.++++..++|+||
T Consensus         5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-----DLE-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-----hhc-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999986  7899888743211 11110     000 0246888999999999999999855599999


Q ss_pred             EccCCC----------------ccchHHHHHhCC--CC-CcEEEEeeeeEeecCCCC-CCCCCCCCCCCccc-cchHHHH
Q 023078           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~-~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      |+++..                ..++.++++++.  +. .++|++||..+||..... +.+|..+..|.+.| .+|..+|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  158 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD  158 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence            999852                223567788776  23 389999999999965432 57777777787777 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      .+++    +.+++++++||+.+|||... ..+++.++..+..++++.+++++++.++|+|++|+++++..++++.. .++
T Consensus       159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~  237 (317)
T TIGR01181       159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGE  237 (317)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCc
Confidence            8864    46899999999999999753 45667777888888877777888889999999999999999998654 567


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +||++++++++++|+++.+.+.+|.+.+.+...+..          +..... .+|++|++++|||+|..
T Consensus       238 ~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~k~~~~lG~~p~~  297 (317)
T TIGR01181       238 TYNIGGGNERTNLEVVETILELLGKDEDLITHVEDR----------PGHDRRYAIDASKIKRELGWAPKY  297 (317)
T ss_pred             eEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCC----------ccchhhhcCCHHHHHHHhCCCCCC
Confidence            999999999999999999999999754222211110          111111 57999999999999864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=9.2e-34  Score=242.48  Aligned_cols=270  Identities=19%  Similarity=0.192  Sum_probs=198.1

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++ |+++++.... ....+.     . .....+++++.+|++|.+++.++++..++|+|||
T Consensus         6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-----D-VSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-----h-cccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999875 5555553211 000000     0 0002457889999999999999998657999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC-----------CCCcEEEEeeeeEeecCC---------C-CCCCCCC
Q 023078           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD---------L-LPHCETD  121 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~-----------~~~~~i~~Ss~~~y~~~~---------~-~~~~e~~  121 (287)
                      +|+..                ..++.+++++|+           ++++||++||..+||...         . .+++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            99852                235777888874           246899999999998531         1 1356777


Q ss_pred             CCCCCccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      +..|.+.| .+|..+|.+++    .++++++++|++.+|||+.. ..++..++..+..+..+.+++++++.++|+|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            77888888 99999998774    46899999999999999853 34566667777777777777888999999999999


Q ss_pred             HHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhh
Q 023078          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVN  274 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~l  274 (287)
                      ++++..++++.. .+++||+++++++|++++++.+.+.+|...|....... .  +......+..... .+|++|++++|
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~-~--~~~~~~~~~~~~~~~~d~~k~~~~l  315 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYRE-Q--ITYVADRPGHDRRYAIDASKISREL  315 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhh-h--ccccccCCCCCceeeeCHHHHHHHc
Confidence            999999888644 56899999999999999999999999964332111110 0  1110001111122 68999999999


Q ss_pred             cccccc
Q 023078          275 MVKRSM  280 (287)
Q Consensus       275 g~~p~~  280 (287)
                      ||+|..
T Consensus       316 g~~p~~  321 (352)
T PRK10084        316 GWKPQE  321 (352)
T ss_pred             CCCCcC
Confidence            999964

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.1e-33  Score=260.18  Aligned_cols=262  Identities=22%  Similarity=0.300  Sum_probs=200.5

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|++.|+++  +++|++++|.... ....+..      .....+++++.+|+.|.+.+..++...++|+||
T Consensus        12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260         12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP------SKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh------cccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            799999999999999997  6899999885311 0001100      001257899999999998888777555899999


Q ss_pred             EccCCCc----------------cchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCC---CCCCCCCCCCccc-cchHH
Q 023078           78 DINGREA----------------DEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        78 ~~a~~~~----------------~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~---~~e~~~~~p~~~~-~~k~~  134 (287)
                      |+|+...                .++.+++++++  + +++|||+||..+||.....+   ..|+.+..|.+.| .+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            9998632                24678888887  4 78999999999999754322   3566666777778 99999


Q ss_pred             HHHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      +|.++.    +.+++++++||+++|||.+. ..+++.++.....++++.+++++++.++|+|++|+|+++..++++.. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999884    36899999999999999764 34566777777888888888888999999999999999999887654 4


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCe-EEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPE-LVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +++||+++++.+|+.|+++.+.+.+|.+... +...+..          +..... .+|++|++ +|||+|..
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~----------p~~~~~~~~d~~k~~-~lGw~p~~  306 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENR----------PFNDQRYFLDDQKLK-KLGWQERT  306 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCC----------CCCcceeecCHHHHH-HcCCCCCC
Confidence            6799999999999999999999999976422 2111111          111122 68999996 59999863

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=9.3e-34  Score=220.75  Aligned_cols=256  Identities=20%  Similarity=0.236  Sum_probs=197.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||.||||+||++.|..+|++|++++.--....+.+..      .....+++++.-|...+     ++.  .+|.|+|+|
T Consensus        33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~------~~~~~~fel~~hdv~~p-----l~~--evD~IyhLA   99 (350)
T KOG1429|consen   33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEH------WIGHPNFELIRHDVVEP-----LLK--EVDQIYHLA   99 (350)
T ss_pred             ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcch------hccCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence            79999999999999999999999999865543333221      01134556665555443     566  899999998


Q ss_pred             CC----------------CccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCC-----CCCCCccc-cchHHHHH
Q 023078           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~-----~~~p~~~~-~~k~~~E~  137 (287)
                      +.                |..++.+++-.|+ -.+||++.||+.|||.....|..|+.     +..|.+-| ..|..+|.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~  179 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET  179 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence            86                3345777777766 55899999999999986655554442     33444446 99999999


Q ss_pred             HH----HhcCCcEEEEccCceecCC---CCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          138 VL----ESKGVNWTSLRPVYIYGPL---NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~----~~~~~~~~ilr~~~v~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                      ++    ++.|+.+.|.|+.+.|||.   ..+.+...|+.+..++.++.+++++.+.++|.+++|+++.++.+++.+..  
T Consensus       180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~--  257 (350)
T KOG1429|consen  180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR--  257 (350)
T ss_pred             HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence            87    4678999999999999997   35667778899999999999999999999999999999999999998653  


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccce
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSML  281 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  281 (287)
                      +-+|++++..+|+.|+++++.+..+-+. .+.+.....-     .    ...+..|+.|+++.|||.|...
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s-~i~~~~~~~D-----d----p~kR~pDit~ake~LgW~Pkv~  318 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVS-EIEFVENGPD-----D----PRKRKPDITKAKEQLGWEPKVS  318 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCc-ceeecCCCCC-----C----ccccCccHHHHHHHhCCCCCCc
Confidence            3599999999999999999999997554 4444432211     0    0111679999999999999753

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=4.5e-33  Score=233.83  Aligned_cols=243  Identities=20%  Similarity=0.200  Sum_probs=184.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|++.|++|+++.+.                         ..+|+++.+.+.++++..++|+|||+|
T Consensus         3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          3 AGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             ccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            7999999999999999999988766432                         147899999999998877899999999


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC----CCCCCc-cc-cchHHH
Q 023078           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS-RH-KGKLNT  135 (287)
Q Consensus        81 ~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~----~~~p~~-~~-~~k~~~  135 (287)
                      +..                 ..++.+++++|+  ++++||++||..+|+.....+.+|+.    +..|.+ .| .+|..+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            752                 224777888887  78899999999999976666777765    444544 36 999999


Q ss_pred             HHHHH----hcCCcEEEEccCceecCCCC-----CchhHHHHH----HHHcCCCccc-CCCCCceeeeeeHHHHHHHHHH
Q 023078          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFH----RLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       136 E~~~~----~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      |++++    ..+++++++||+.+|||+..     ..+++.++.    ....+.++.+ ++++++.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            97653    56899999999999999742     233444443    2344555544 6778889999999999999999


Q ss_pred             HhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++++.. .++.||++++..+|+.|+++.+.+.+|.+. .+...+...   .     . .....+|++|++ +|||+|.+
T Consensus       218 ~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~---~-----~-~~~~~~d~~k~~-~lg~~p~~  284 (306)
T PLN02725        218 LMRRYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEG-ELVWDTSKP---D-----G-TPRKLMDSSKLR-SLGWDPKF  284 (306)
T ss_pred             HHhccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCC-ceeecCCCC---C-----c-ccccccCHHHHH-HhCCCCCC
Confidence            998754 346789999999999999999999999764 332211100   0     0 011268999996 69999964

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.5e-33  Score=236.91  Aligned_cols=254  Identities=17%  Similarity=0.161  Sum_probs=178.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HH-HHhhhcc---CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~~~~~~~---~~~   73 (287)
                      ||||||||++|++.|+++|++++++.|+...... .              ..+..+|+.|.   +. +..+++.   .++
T Consensus         5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F--------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             ecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-H--------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            7999999999999999999988887776433110 0              11223444443   33 2333321   269


Q ss_pred             cEEEEccCC--------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHH
Q 023078           74 DVVYDINGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        74 d~vi~~a~~--------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      |+|||+|+.              |..++.+++++|+  ++ +|||+||.++||.....+.+|+.+..|.+.| .+|..+|
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  148 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFD  148 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHH
Confidence            999999874              2234678889887  54 7999999999997654456777777888878 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCCC-c----hhHHHHHHHHcCCCccc-CCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~~-~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      ++++    +.+++++++||+++|||++.. .    +...+...+.++....+ .++++..++|+|++|++++++.+++..
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~  228 (308)
T PRK11150        149 EYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG  228 (308)
T ss_pred             HHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC
Confidence            8775    358999999999999997532 1    22334466777765433 356677899999999999999888764


Q ss_pred             cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      .  +++||++++.++|+.|+++.+.+.+|...  +...+.....   ..  .......+|++|+++ +||+|..
T Consensus       229 ~--~~~yni~~~~~~s~~el~~~i~~~~~~~~--~~~~~~~~~~---~~--~~~~~~~~d~~k~~~-~g~~p~~  292 (308)
T PRK11150        229 V--SGIFNCGTGRAESFQAVADAVLAYHKKGE--IEYIPFPDKL---KG--RYQAFTQADLTKLRA-AGYDKPF  292 (308)
T ss_pred             C--CCeEEcCCCCceeHHHHHHHHHHHhCCCc--ceeccCcccc---cc--ccceecccCHHHHHh-cCCCCCC
Confidence            3  46999999999999999999999998531  1111111100   00  000011679999985 7999864

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.4e-32  Score=233.96  Aligned_cols=263  Identities=23%  Similarity=0.287  Sum_probs=191.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++|++|++++|........+.     .... ...++.++.+|++|.+.+.++++..++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999875332111110     0011 123577889999999999998876679999999


Q ss_pred             cCCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCC-CCCccc-cchHHHHHHH
Q 023078           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL  139 (287)
Q Consensus        80 a~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-~p~~~~-~~k~~~E~~~  139 (287)
                      ++...                .++.+++++++  ++++||++||.++||.....+++|+.+. .|.+.| .+|..+|+++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            87532                24667888876  7889999999999987655667777765 567777 9999999988


Q ss_pred             Hh-----cCCcEEEEccCceecCCC------C-----CchhHHHHHHHHcCC--CcccCC------CCCceeeeeeHHHH
Q 023078          140 ES-----KGVNWTSLRPVYIYGPLN------Y-----NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDL  195 (287)
Q Consensus       140 ~~-----~~~~~~ilr~~~v~g~~~------~-----~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~Dv  195 (287)
                      ++     .+++++++|++++||+..      .     ..+.+.+ .++..+.  .+.+++      ++.+.++|+|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH-HHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            53     368999999999999731      1     1123333 3333332  233322      56788999999999


Q ss_pred             HHHHHHHhcC--CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhh
Q 023078          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFS  272 (287)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~  272 (287)
                      |++++.+++.  ....+++||+++++.+|++|+++.+.+.+|++. .+...+...          ..... ..|++|+++
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~~~~k~~~  308 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPV-NYHFAPRRE----------GDLPAYWADASKADR  308 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCC-CeeeCCCCC----------CchhhhhcCHHHHHH
Confidence            9999998875  223457999999999999999999999999765 333322111          00111 679999999


Q ss_pred             hhcccccc
Q 023078          273 VNMVKRSM  280 (287)
Q Consensus       273 ~lg~~p~~  280 (287)
                      +|||+|..
T Consensus       309 ~lg~~p~~  316 (338)
T PRK10675        309 ELNWRVTR  316 (338)
T ss_pred             HhCCCCcC
Confidence            99999864

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.7e-32  Score=234.69  Aligned_cols=267  Identities=19%  Similarity=0.228  Sum_probs=195.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|++|++.|+++|++|++++|........... ..........+++++.+|+++.+.+.++++..++|.|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a   89 (352)
T PLN02240         11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRR-VKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA   89 (352)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHH-HHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEcc
Confidence            79999999999999999999999998754321100000 00000001246889999999999999988766899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +..                ..++.+++++++  ++++||++||.++|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (352)
T PLN02240         90 GLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRD  169 (352)
T ss_pred             ccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            852                124667888876  7889999999999987666678888888888878 999999998742


Q ss_pred             -----cCCcEEEEccCceecCCCC-----------CchhHHHHHHHHcCC--CcccCC------CCCceeeeeeHHHHHH
Q 023078          142 -----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLAR  197 (287)
Q Consensus       142 -----~~~~~~ilr~~~v~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~Dva~  197 (287)
                           .+++++++|++++||+...           ..+.+ ++..+..++  .+.+++      ++.+.++|+|++|+|+
T Consensus       170 ~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~  248 (352)
T PLN02240        170 IHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLAD  248 (352)
T ss_pred             HHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH-HHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHH
Confidence                 4688999999999997421           11222 334444443  333433      5688999999999999


Q ss_pred             HHHHHhcCC----cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhh
Q 023078          198 AFVQVLGNE----KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFS  272 (287)
Q Consensus       198 ~~~~~~~~~----~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~  272 (287)
                      +++.++++.    ...+++||+++++++|++|+++.+.+.+|.+. .+...+...          ..... ..|++|+++
T Consensus       249 a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~d~~k~~~  317 (352)
T PLN02240        249 GHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKI-PLKLAPRRP----------GDAEEVYASTEKAEK  317 (352)
T ss_pred             HHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCC-CceeCCCCC----------CChhhhhcCHHHHHH
Confidence            998887642    23457999999999999999999999999765 333332211          11112 679999999


Q ss_pred             hhcccccc
Q 023078          273 VNMVKRSM  280 (287)
Q Consensus       273 ~lg~~p~~  280 (287)
                      +|||+|..
T Consensus       318 ~lg~~p~~  325 (352)
T PLN02240        318 ELGWKAKY  325 (352)
T ss_pred             HhCCCCCC
Confidence            99999974

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.2e-32  Score=229.42  Aligned_cols=256  Identities=29%  Similarity=0.376  Sum_probs=199.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCc-cEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-d~vi~~   79 (287)
                      ||||||||++|++.|+++||+|++++|...+.....            .++.++.+|+++.+...+..+  .. |+|||+
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~   71 (314)
T COG0451           6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL   71 (314)
T ss_pred             EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence            799999999999999999999999999876632211            367889999999888888887  55 999999


Q ss_pred             cCCC-----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecC-CCCCCCCC-CCCCCCccc-cchHHHHH
Q 023078           80 NGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~-~~~~~~e~-~~~~p~~~~-~~k~~~E~  137 (287)
                      ++..                 ..++.+++++++  ++++|||.||.++|+.. ...+.+|+ .+..|.+.| .+|+.+|+
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8763                 224777888887  89999998888887765 33367777 677777767 99999999


Q ss_pred             HHHh----cCCcEEEEccCceecCCCCCc----hhHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~~----~~~~~~ilr~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      ++..    .+++++++||+++|||+....    +...++.++..+.+ ..+.+++...++++|++|+++++..+++++..
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            9854    469999999999999986553    34444555666665 55556777889999999999999999998764


Q ss_pred             CCceEEeeCCC-cccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhccccc
Q 023078          209 SRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRS  279 (287)
Q Consensus       209 ~~~~~~~~~~~-~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  279 (287)
                      .  .||++++. ..+++|+++.+.+.+|.+.+.+...+...   .    ........+|++|++++|||+|.
T Consensus       232 ~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~lg~~p~  294 (314)
T COG0451         232 G--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGR---R----GDLREGKLLDISKARAALGWEPK  294 (314)
T ss_pred             c--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCC---C----CcccccccCCHHHHHHHhCCCCC
Confidence            3  99999997 89999999999999998864333322200   0    00011117899999999999997

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=9.9e-34  Score=234.08  Aligned_cols=246  Identities=24%  Similarity=0.297  Sum_probs=183.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|+||++|.+.|.++|++|+++.|.                          ..|++|.+.+.+.++..++|+|||+|
T Consensus         6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            6999999999999999999999999775                          34788999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                ...+.+++++|. ...++||+||..||++....+++|++++.|.+.| ++|.++|+.+++.
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            862                345778888887 5669999999999998877789999999999998 9999999999886


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc---CCCceEEeeCCC
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~~~~~~~~~~~  219 (287)
                      .-+++|+|++++||+ ...++..++++.+.+++.+.++.  ++.++.++++|+|+++..++++..   ...++||+++++
T Consensus       140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            679999999999999 44678888999999999887654  578899999999999999998743   245799999999


Q ss_pred             cccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          220 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       220 ~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      .+|+.|+++.+.+.+|.+.+.+...+.........     ++.. .+|++|+++.||.++..
T Consensus       217 ~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~-----rp~~~~L~~~kl~~~~g~~~~~  273 (286)
T PF04321_consen  217 RVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAP-----RPRNTSLDCRKLKNLLGIKPPP  273 (286)
T ss_dssp             -EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSG-----S-SBE-B--HHHHHCTTS---B
T ss_pred             ccCHHHHHHHHHHHhCCCCceEEecccccCCCCCC-----CCCcccccHHHHHHccCCCCcC
Confidence            99999999999999999887777776665433221     2223 89999999999998764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=5e-32  Score=230.15  Aligned_cols=257  Identities=18%  Similarity=0.170  Sum_probs=181.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|++++|+.+......    ...+.....+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A   89 (342)
T PLN02214         16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTH----LRELEGGKERLILCKADLQDYEALKAAID--GCDGVFHTA   89 (342)
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHH----HHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEec
Confidence            799999999999999999999999999765311100    00011112357889999999999999998  899999999


Q ss_pred             CCC-----------ccchHHHHHhCC--CCCcEEEEeee-eEeecCCC---CCCCCCC------CCCCCccc-cchHHHH
Q 023078           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNTE  136 (287)
Q Consensus        81 ~~~-----------~~~~~~l~~a~~--~~~~~i~~Ss~-~~y~~~~~---~~~~e~~------~~~p~~~~-~~k~~~E  136 (287)
                      +..           ..++.+++++++  ++++||++||. .+||....   .+++|+.      +..|.+.| .+|..+|
T Consensus        90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE  169 (342)
T PLN02214         90 SPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAE  169 (342)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHH
Confidence            863           345788899886  78899999996 58875322   2356653      23455667 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCCCc---hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      +++.    +.+++++++||+++|||++...   ....++. ...+.... .  +++.++|||++|+|++++.+++++. .
T Consensus       170 ~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~-~  244 (342)
T PLN02214        170 QAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLK-YLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPS-A  244 (342)
T ss_pred             HHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCcc-c
Confidence            9874    4589999999999999975422   1222332 33444332 2  2457899999999999999998765 3


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRS  279 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  279 (287)
                      ++.||+++ ..++++|+++.+.+.++...     .+... ..+.   .+......+|++|++ +|||+|.
T Consensus       245 ~g~yn~~~-~~~~~~el~~~i~~~~~~~~-----~~~~~-~~~~---~~~~~~~~~d~~k~~-~LG~~p~  303 (342)
T PLN02214        245 SGRYLLAE-SARHRGEVVEILAKLFPEYP-----LPTKC-KDEK---NPRAKPYKFTNQKIK-DLGLEFT  303 (342)
T ss_pred             CCcEEEec-CCCCHHHHHHHHHHHCCCCC-----CCCCC-cccc---CCCCCccccCcHHHH-HcCCccc
Confidence            45899987 46899999999999986321     11100 0000   001111157999997 5999995

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=6.8e-32  Score=227.50  Aligned_cols=259  Identities=21%  Similarity=0.240  Sum_probs=187.1

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc--CCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~d~vi   77 (287)
                      ||||||||+++++.|.++|+ +|++++|.....  .+.        .  .....+.+|+.+.+.+..+.+.  .++|+||
T Consensus         4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~--------~--~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFL--------N--LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhh--------h--hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            79999999999999999997 788887754321  111        0  1123466788777766655431  3799999


Q ss_pred             EccCCC--------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCC-CCCCccc-cchHHHHHHHH
Q 023078           78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        78 ~~a~~~--------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~-~~p~~~~-~~k~~~E~~~~  140 (287)
                      |+|+..              ..++.+++++|+ ...+||++||.++|+.... +.+|+.. ..|.+.| .+|..+|.+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            999852              234677888876 2348999999999986543 4555544 3477778 99999999875


Q ss_pred             h------cCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccC------CCCCceeeeeeHHHHHHHHHHHh
Q 023078          141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       141 ~------~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +      .+++++++|++.+|||+..     ..++..++..+..++++.++      +++++.++++|++|+++++..++
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~  230 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL  230 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence            3      2578999999999999743     23455667777777765443      45778899999999999999999


Q ss_pred             cCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      .+ . .+++||+++++++|++|+++.+.+.+|.+. .+...+.+.....     .......+|++|++++|||+|..
T Consensus       231 ~~-~-~~~~yni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~k~~~~l~~~p~~  299 (314)
T TIGR02197       231 EN-G-VSGIFNLGTGRARSFNDLADAVFKALGKDE-KIEYIPMPEALRG-----KYQYFTQADITKLRAAGYYGPFT  299 (314)
T ss_pred             hc-c-cCceEEcCCCCCccHHHHHHHHHHHhCCCC-cceeccCcccccc-----ccccccccchHHHHHhcCCCCcc
Confidence            87 3 457999999999999999999999999764 3333322211000     00011167999999999999864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-31  Score=214.31  Aligned_cols=245  Identities=21%  Similarity=0.199  Sum_probs=204.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||++|++|+.|.+.|. .+++|++++|.+                          .|++|.+.+.+++++.+||+|||+|
T Consensus         6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            7999999999999999 779999999863                          5889999999999998999999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +..                ..+..++.++|+ -..++||+||..||++....++.|++.+.|.+.| ++|+..|..+++.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            873                345788888887 4558999999999999888899999999999999 9999999999999


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +.+.+|+|.+++||... .+|...+++...+++++.+..  ++..+.++..|+|+++..+++..... ++||+++...+|
T Consensus       139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~~-~~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKEG-GVYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhccccC-cEEEEeCCCccc
Confidence            99999999999999965 678888999999999887754  58889999999999999999887643 499999988899


Q ss_pred             HHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccce
Q 023078          223 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSML  281 (287)
Q Consensus       223 ~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~~  281 (287)
                      |.|+++.|.+.++.+.......+.......     ..++.+ .+|++|+.+.+|++|...
T Consensus       215 wydfa~~I~~~~~~~~~v~~~~~~~~~~~~-----a~RP~~S~L~~~k~~~~~g~~~~~w  269 (281)
T COG1091         215 WYEFAKAIFEEAGVDGEVIEPIASAEYPTP-----AKRPANSSLDTKKLEKAFGLSLPEW  269 (281)
T ss_pred             HHHHHHHHHHHhCCCccccccccccccCcc-----CCCCcccccchHHHHHHhCCCCccH
Confidence            999999999999976522212222211111     112222 789999999999987643

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.1e-32  Score=219.67  Aligned_cols=272  Identities=23%  Similarity=0.258  Sum_probs=210.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+|.+-+|+++||.|.+++.-.......+..  .+.+..-...+.++++|+.|.+.++++|+...+|.|+|+|
T Consensus         8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r--~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa   85 (343)
T KOG1371|consen    8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR--VRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA   85 (343)
T ss_pred             ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHH--HHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence            79999999999999999999999999855443222210  1111111478999999999999999999999999999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCC-CCccc-cchHHHHHHHH
Q 023078           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE  140 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~-p~~~~-~~k~~~E~~~~  140 (287)
                      +.                |+.++.+++++|+  +++.+|+.||+.+||.....|++|+.+.. |.++| ++|...|+++.
T Consensus        86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence            86                4567899999987  89999999999999999999999999988 99998 99999999985


Q ss_pred             ----hcCCcEEEEccCceec--CCC---------CCchhHHHHHHHHcCC--Cccc------CCCCCceeeeeeHHHHHH
Q 023078          141 ----SKGVNWTSLRPVYIYG--PLN---------YNPVEEWFFHRLKAGR--PIPI------PGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       141 ----~~~~~~~ilr~~~v~g--~~~---------~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~i~~~Dva~  197 (287)
                          ..++.++.||..+++|  |..         ..+..+. .....-++  .+.+      ..+++..++++|+-|.|+
T Consensus       166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~-v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~  244 (343)
T KOG1371|consen  166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPY-VFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLAD  244 (343)
T ss_pred             hhhccccceEEEEEeccccCccccCccCCCCccCccccccc-ccchhhcccccceeecCcccccCCCeeecceeeEehHH
Confidence                3468999999999999  431         1122222 11222111  1111      124578999999999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhh
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVN  274 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~l  274 (287)
                      ....++.+..  ..-++||++.+...+..+|++++++..|.+.+... .+.          .+....+ ..+++++.++|
T Consensus       245 ~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~-v~~----------R~gdv~~~ya~~~~a~~el  313 (343)
T KOG1371|consen  245 GHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKV-VPR----------RNGDVAFVYANPSKAQREL  313 (343)
T ss_pred             HHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccc-cCC----------CCCCceeeeeChHHHHHHh
Confidence            9999998643  23359999999999999999999999999874322 221          1111222 78999999999


Q ss_pred             cccccceeeeec
Q 023078          275 MVKRSMLAFYIC  286 (287)
Q Consensus       275 g~~p~~~~~~~~  286 (287)
                      ||+|+.....||
T Consensus       314 gwk~~~~iee~c  325 (343)
T KOG1371|consen  314 GWKAKYGLQEML  325 (343)
T ss_pred             CCccccCHHHHH
Confidence            999999988888

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=1.2e-32  Score=222.81  Aligned_cols=206  Identities=33%  Similarity=0.478  Sum_probs=178.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|+.+.|+........          ...+++++.+|+.|.+.+.++++..++|+|||++
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----------~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEE----------KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHH----------HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EccCCHHHHHHHHHHHHcCCcccccccccccccccc----------ccceEEEEEeeccccccccccccccCceEEEEee
Confidence            699999999999999999999999999877632111          1137899999999999999999976779999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +..                ...+.+++++++  ++++||++||..+|+.....+++|+.+..|.+.| .+|...|++++ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            873                224677888887  7899999999999998877778899888888888 99999999874 


Q ss_pred             ---hcCCcEEEEccCceecCC----CCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceE
Q 023078          141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~  213 (287)
                         +.+++++++||+++|||.    ....++..++.++..++++.+++++++.++++|++|+|++++.+++++...+++|
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y  233 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY  233 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence               358999999999999998    4567788899999999988888999999999999999999999999887678899


Q ss_pred             Eee
Q 023078          214 NIS  216 (287)
Q Consensus       214 ~~~  216 (287)
                      |++
T Consensus       234 Nig  236 (236)
T PF01370_consen  234 NIG  236 (236)
T ss_dssp             EES
T ss_pred             EeC
Confidence            985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=6.1e-31  Score=222.93  Aligned_cols=264  Identities=20%  Similarity=0.252  Sum_probs=194.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|........+..     ... ..+++++.+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKR-----GER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhh-----hcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            79999999999999999999999887654332221111     000 125778899999999999998766799999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +..                ..++.++++++.  +++++|++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence            853                234567778776  6789999999999987655567888877787777 999999988742


Q ss_pred             -----cCCcEEEEccCceecCCCC----------CchhHHHHHHHH-cCCCcccC------CCCCceeeeeeHHHHHHHH
Q 023078          142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       142 -----~~~~~~ilr~~~v~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~Dva~~~  199 (287)
                           .+++++++||+.+||+...          ..+++.+..... ....+..+      .++.+.++|+|++|+++++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence                 6899999999999998521          123333443333 22333222      3456789999999999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcc
Q 023078          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMV  276 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~  276 (287)
                      ..++...  ...+++||+++++++|++|+++.+.+.+|++. .+...+...          ..... ..|++|++++|||
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~lg~  307 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF-PVELAPRRP----------GDPASLVADASKIRRELGW  307 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc-ceEeCCCCC----------ccccchhcchHHHHHHhCC
Confidence            9988752  23467999999999999999999999999875 333322211          00111 5699999999999


Q ss_pred             cccce
Q 023078          277 KRSML  281 (287)
Q Consensus       277 ~p~~~  281 (287)
                      +|...
T Consensus       308 ~p~~~  312 (328)
T TIGR01179       308 QPKYT  312 (328)
T ss_pred             CCCcc
Confidence            99753

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=6.7e-31  Score=223.49  Aligned_cols=259  Identities=19%  Similarity=0.220  Sum_probs=178.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|++++|+.........   ...+. ...+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   88 (338)
T PLN00198         15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH---LRALQ-ELGDLKIFGADLTDEESFEAPIA--GCDLVFHVA   88 (338)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH---HHhcC-CCCceEEEEcCCCChHHHHHHHh--cCCEEEEeC
Confidence            7999999999999999999999999987643211000   00000 01358899999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC---CCCcEEEEeeeeEeecCC----CCCCCCCC---------CCCCCccc
Q 023078           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKSRH  129 (287)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~----~~~~~e~~---------~~~p~~~~  129 (287)
                      +..               ..++.+++++++   ++++||++||..+|+...    ..+.+|+.         ...|.+.|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y  168 (338)
T PLN00198         89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGY  168 (338)
T ss_pred             CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchh
Confidence            842               223566788764   478999999999998532    22333431         23456667


Q ss_pred             -cchHHHHHHHH----hcCCcEEEEccCceecCCCCC---chhHHHHHHHHcCCCcccCC-CCC----ceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGI----QVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~Dva  196 (287)
                       .+|.++|.++.    +++++++++||+++|||++..   ..+ .++..+..++.+.+.+ ++.    ..++|+|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a  247 (338)
T PLN00198        169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC  247 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence             99999998764    468999999999999997532   122 1233455555544443 222    237999999999


Q ss_pred             HHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcc
Q 023078          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMV  276 (287)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  276 (287)
                      ++++.+++.... ++.|+ +++..+|+.|+++.+.+.++........        +..   +.......|++|+++ +||
T Consensus       248 ~a~~~~~~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~k~~~-~G~  313 (338)
T PLN00198        248 RAHIFLAEKESA-SGRYI-CCAANTSVPELAKFLIKRYPQYQVPTDF--------GDF---PSKAKLIISSEKLIS-EGF  313 (338)
T ss_pred             HHHHHHhhCcCc-CCcEE-EecCCCCHHHHHHHHHHHCCCCCCCccc--------ccc---CCCCccccChHHHHh-CCc
Confidence            999999987543 34675 5566799999999999988642111111        100   001111579999987 699


Q ss_pred             cccc
Q 023078          277 KRSM  280 (287)
Q Consensus       277 ~p~~  280 (287)
                      +|..
T Consensus       314 ~p~~  317 (338)
T PLN00198        314 SFEY  317 (338)
T ss_pred             eecC
Confidence            9985

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.98  E-value=1.1e-30  Score=221.06  Aligned_cols=258  Identities=16%  Similarity=0.136  Sum_probs=182.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|++++|+.........   .........+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A   85 (325)
T PLN02989         11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDH---LLALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA   85 (325)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHH---HHhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999988654211000   00000012468899999999999999998  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC---CCCcEEEEeeeeEeecCC-----CCCCCCCCCCCCC------ccc-
Q 023078           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD-----LLPHCETDTVDPK------SRH-  129 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~-----~~~~~e~~~~~p~------~~~-  129 (287)
                      +..                ..++.++++++.   +.++||++||..+|+...     ..+++|+.+..|.      +.| 
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            852                123567777764   467999999998775432     2346777666553      456 


Q ss_pred             cchHHHHHHHH----hcCCcEEEEccCceecCCCCC--chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      .+|..+|.++.    +++++++++||+++|||++..  .+...++..+..++...  +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence            99999998874    468999999999999998543  23334555555555432  2  24579999999999999999


Q ss_pred             cCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +++.. ++.||++ +..+|++|+++.+.+.++...  +...+ ...       .+..... ..|++|+++ |||+|..
T Consensus       242 ~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~~~--~~~~~-~~~-------~~~~~~~~~~~~~k~~~-lg~~p~~  306 (325)
T PLN02989        242 ETPSA-NGRYIID-GPVVTIKDIENVLREFFPDLC--IADRN-EDI-------TELNSVTFNVCLDKVKS-LGIIEFT  306 (325)
T ss_pred             cCccc-CceEEEe-cCCCCHHHHHHHHHHHCCCCC--CCCCC-CCc-------ccccccCcCCCHHHHHH-cCCCCCC
Confidence            87653 4589995 557999999999999997321  11000 000       0111112 678999876 9999864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.97  E-value=2e-30  Score=219.91  Aligned_cols=262  Identities=19%  Similarity=0.252  Sum_probs=188.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+++++.|+++|++|++++|++.... .+.          ..+++++.+|+.+.+++.++++  ++|+|||++
T Consensus         6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a   72 (328)
T TIGR03466         6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA   72 (328)
T ss_pred             ECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence            799999999999999999999999999865521 111          2368899999999999999998  899999998


Q ss_pred             CCC--------------ccchHHHHHhCC--CCCcEEEEeeeeEeec-CCCCCCCCCCCCCCC---ccc-cchHHHHHHH
Q 023078           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPK---SRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~-~~~~~~~e~~~~~p~---~~~-~~k~~~E~~~  139 (287)
                      +..              ..++.+++++++  +++++|++||..+|+. ....+.+|+.+..|.   +.| .+|..+|+++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence            642              234677788776  7889999999999985 344567777665553   456 8999999987


Q ss_pred             Hh----cCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEE
Q 023078          140 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (287)
Q Consensus       140 ~~----~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~  214 (287)
                      ++    .+++++++||+++||+++... ....++.....+..... .  +...+++|++|+|+++..+++++. .+..|+
T Consensus       153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAY-V--DTGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCcee-e--CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            53    589999999999999975322 12223333333332211 1  234689999999999999998754 567888


Q ss_pred             eeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcC------------CCCccccc------cccccccchhhHhhhhcc
Q 023078          215 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FGKKKAFP------FRDQVIASLKTAFSVNMV  276 (287)
Q Consensus       215 ~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~------------~~~~~~~~------~~~~~~~~~~k~~~~lg~  276 (287)
                      ++ ++++|++|+++.+.+.+|++.+ ....+.....            .+.....+      ......+|++|++++|||
T Consensus       229 ~~-~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~  306 (328)
T TIGR03466       229 LG-GENLTLKQILDKLAEITGRPAP-RVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGY  306 (328)
T ss_pred             ec-CCCcCHHHHHHHHHHHhCCCCC-CCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCC
Confidence            85 6789999999999999997652 2223321100            01000000      001126799999999999


Q ss_pred             cccce
Q 023078          277 KRSML  281 (287)
Q Consensus       277 ~p~~~  281 (287)
                      +|..+
T Consensus       307 ~p~~~  311 (328)
T TIGR03466       307 RQRPA  311 (328)
T ss_pred             CCcCH
Confidence            99643

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=1e-30  Score=221.13  Aligned_cols=257  Identities=16%  Similarity=0.144  Sum_probs=179.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+...... ...  ...+.....+++++.+|+.+.+.+..+++  ++|+|||+|
T Consensus        10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   84 (322)
T PLN02662         10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEH--LLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA   84 (322)
T ss_pred             ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHH--HHhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999997643110 000  00000012468899999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC---CCCcEEEEeeee--EeecC---CCCCCCCCCCCCCC------ccc-c
Q 023078           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAG--VYLKS---DLLPHCETDTVDPK------SRH-K  130 (287)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~--~y~~~---~~~~~~e~~~~~p~------~~~-~  130 (287)
                      +..               ..++.+++++++   +++|||++||.+  +|+..   ...+++|+.+..|.      +.| .
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            752               234667888764   678999999986  46532   22346666554442      346 9


Q ss_pred             chHHHHHHHH----hcCCcEEEEccCceecCCCCC--chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      +|..+|+++.    +.+++++++||+++|||....  .....++..+..+...    .+++.++|+|++|+|++++.+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT----FPNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc----CCCCCcCeEEHHHHHHHHHHHhc
Confidence            9999998763    568999999999999997532  2233344445455432    12467899999999999999998


Q ss_pred             CCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhccccc
Q 023078          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRS  279 (287)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  279 (287)
                      ++.. ++.||++ ++.+|++|+++.+.+.++... .    +....  . .  .+.......|++|+++ |||+|.
T Consensus       241 ~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~~~-~----~~~~~--~-~--~~~~~~~~~d~~k~~~-lg~~~~  302 (322)
T PLN02662        241 IPSA-SGRYCLV-ERVVHYSEVVKILHELYPTLQ-L----PEKCA--D-D--KPYVPTYQVSKEKAKS-LGIEFI  302 (322)
T ss_pred             CcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCCCC-C----CCCCC--C-c--cccccccccChHHHHH-hCCccc
Confidence            7653 3478987 567999999999999887421 1    11000  0 0  0101111689999985 999874

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=5.8e-30  Score=207.62  Aligned_cols=261  Identities=18%  Similarity=0.155  Sum_probs=182.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++||.|++++|++...... .  ....+.....+..++.+|+.|++++.++++  ++|.|+|+|
T Consensus        12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~--~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH~A   86 (327)
T KOG1502|consen   12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-E--HLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDGVFHTA   86 (327)
T ss_pred             eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-H--HHHhcccCcccceEEeccccccchHHHHHh--CCCEEEEeC
Confidence            89999999999999999999999999998872110 0  011122223568999999999999999999  999999999


Q ss_pred             CC---------------CccchHHHHHhCC---CCCcEEEEeeeeEeecC-----CCCCCCCCCCCCCC------ccc-c
Q 023078           81 GR---------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTVDPK------SRH-K  130 (287)
Q Consensus        81 ~~---------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~-----~~~~~~e~~~~~p~------~~~-~  130 (287)
                      .+               .+.++.|++++|+   .++|+|++||.++....     ....++|+....+.      ..| .
T Consensus        87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~  166 (327)
T KOG1502|consen   87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL  166 (327)
T ss_pred             ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence            86               2347899999987   48999999999865422     12234444432111      235 8


Q ss_pred             chHHHHHHH----HhcCCcEEEEccCceecCCCCC--chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~----~~~~~~~~ilr~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      +|..+|+..    .+.+++.+.+.|+.|+||....  +........+.+|..-..   .+....|+|++|+|.+.+.+++
T Consensus       167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a~E  243 (327)
T KOG1502|consen  167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLALE  243 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHHHc
Confidence            899888753    5678999999999999998543  222334445556543222   2234459999999999999999


Q ss_pred             CCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++... +.|.+.++. .++.|+++.+.+.+....     ++........    +......++++|+++..|++...
T Consensus       244 ~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~~~-----ip~~~~~~~~----~~~~~~~~~~~k~k~lg~~~~~~  308 (327)
T KOG1502|consen  244 KPSAK-GRYICVGEV-VSIKEIADILRELFPDYP-----IPKKNAEEHE----GFLTSFKVSSEKLKSLGGFKFRP  308 (327)
T ss_pred             CcccC-ceEEEecCc-ccHHHHHHHHHHhCCCCC-----CCCCCCcccc----ccccccccccHHHHhcccceecC
Confidence            98855 589888755 679999999999988543     1111110000    00001146889998754466543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.97  E-value=2.1e-30  Score=221.51  Aligned_cols=259  Identities=17%  Similarity=0.167  Sum_probs=174.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.........   .........+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A   85 (351)
T PLN02650         11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKH---LLDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA   85 (351)
T ss_pred             eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH---HHhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999997654211100   00000001357889999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC--C-CCcEEEEeeeeEeecCC-CCC-CCCCCC---------CCCCccc-c
Q 023078           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLP-HCETDT---------VDPKSRH-K  130 (287)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~-~~~-~~e~~~---------~~p~~~~-~  130 (287)
                      +..               ..++.+++++++  + +++|||+||.++|+... ..+ ++|+..         ..|.+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            742               124677888876  4 68999999998776432 222 344421         1233457 9


Q ss_pred             chHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHHHHHH--HcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      +|..+|.+++    +++++++++||+++|||++.......++..+  ..+.... ++. .+.++|+|++|+|++++.+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhc
Confidence            9999998763    5689999999999999975433323333222  2222211 122 234799999999999999998


Q ss_pred             CCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ++.. ++.| ++++.++|+.|+++.+.+.++... .....+      + .   +..... ..|++|+ ++|||+|..
T Consensus       244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~-~~~~~~------~-~---~~~~~~~~~d~~k~-~~lG~~p~~  306 (351)
T PLN02650        244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYN-IPARFP------G-I---DEDLKSVEFSSKKL-TDLGFTFKY  306 (351)
T ss_pred             CcCc-CceE-EecCCCcCHHHHHHHHHHhCcccC-CCCCCC------C-c---CcccccccCChHHH-HHhCCCCCC
Confidence            7553 3478 556677999999999999887321 100000      0 0   001111 5688887 479999984

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=2.7e-30  Score=218.40  Aligned_cols=258  Identities=15%  Similarity=0.136  Sum_probs=178.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||+++++.|+++|++|++++|+...... ...  .........+++++.+|+++.+.+.++++  ++|+|||+|
T Consensus        11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A   85 (322)
T PLN02986         11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK-TEH--LLALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA   85 (322)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH-HHH--HHhccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999997654211 000  00000012468899999999999999998  899999999


Q ss_pred             CCC---------------ccchHHHHHhCC---CCCcEEEEeeeeEe--ecC---CCCCCCCCCCCCC------Cccc-c
Q 023078           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVDP------KSRH-K  130 (287)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~~y--~~~---~~~~~~e~~~~~p------~~~~-~  130 (287)
                      +..               ..++.+++++++   +++|||++||.++|  +..   ...+.+|+....|      .+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            852               124667788865   57899999998864  322   1223555544322      3556 9


Q ss_pred             chHHHHHHHH----hcCCcEEEEccCceecCCCCC--chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      +|..+|.++.    +++++++++||+++|||....  .+...++..+..+...  ++  .+.++|+|++|+|++++.+++
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc
Confidence            9999998763    468999999999999997432  2223445555555543  22  456899999999999999998


Q ss_pred             CCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       205 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++.. ++.||++ +..+|++|+++.+.+.++..  .   .+... .-+    ........+|++|+++ |||+|..
T Consensus       242 ~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~~~--~---~~~~~-~~~----~~~~~~~~~d~~~~~~-lg~~~~~  304 (322)
T PLN02986        242 TPSA-NGRYIID-GPIMSVNDIIDILRELFPDL--C---IADTN-EES----EMNEMICKVCVEKVKN-LGVEFTP  304 (322)
T ss_pred             Cccc-CCcEEEe-cCCCCHHHHHHHHHHHCCCC--C---CCCCC-ccc----cccccCCccCHHHHHH-cCCcccC
Confidence            8654 3589995 55799999999999998731  1   11100 000    0000001378999864 9999863

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.5e-30  Score=222.88  Aligned_cols=259  Identities=19%  Similarity=0.214  Sum_probs=180.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh---hcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||+||||+++++.|+++|++|++++|+...... +..  .....+   ...+++++.+|++|.+.+.++++  ++|.||
T Consensus        59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~-l~~--l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d~V~  133 (367)
T PLN02686         59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK-LRE--MEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCAGVF  133 (367)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH--HhhhccccccCCceEEEEcCCCCHHHHHHHHH--hccEEE
Confidence            7999999999999999999999999887543211 100  000000   01257889999999999999998  899999


Q ss_pred             EccCCC----------------ccchHHHHHhCC---CCCcEEEEeee--eEeecC--CC--CCCCCCC------CCCCC
Q 023078           78 DINGRE----------------ADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TVDPK  126 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~a~~---~~~~~i~~Ss~--~~y~~~--~~--~~~~e~~------~~~p~  126 (287)
                      |+++..                ..++.+++++++   +++||||+||.  .+|+..  ..  ..++|+.      +..|.
T Consensus       134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~  213 (367)
T PLN02686        134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK  213 (367)
T ss_pred             ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence            998641                234678899975   68999999996  477642  11  2244432      23345


Q ss_pred             ccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      +.| .+|..+|+++.    +.+++++++||+++|||++.......++ ....+. ..+++++  .++|+|++|++++++.
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g--~~~~v~V~Dva~A~~~  289 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADG--LLATADVERLAEAHVC  289 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCC--CcCeEEHHHHHHHHHH
Confidence            557 99999999873    4689999999999999975332222223 333443 3444543  3579999999999999


Q ss_pred             HhcCC--cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccc
Q 023078          202 VLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKR  278 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p  278 (287)
                      +++..  ...+++| +++++.++++|+++.+.+.+|.+... ...+..         .+..... .+|++|++++|||+|
T Consensus       290 al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~-~~~~~~---------~~~d~~~~~~d~~kl~~~l~~~~  358 (367)
T PLN02686        290 VYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINK-IAGNSS---------SDDTPARFELSNKKLSRLMSRTR  358 (367)
T ss_pred             HHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCc-CCCchh---------hcCCcccccccHHHHHHHHHHhh
Confidence            99852  2345678 77788899999999999999976422 111100         0011112 789999999999998


Q ss_pred             c
Q 023078          279 S  279 (287)
Q Consensus       279 ~  279 (287)
                      .
T Consensus       359 ~  359 (367)
T PLN02686        359 R  359 (367)
T ss_pred             h
Confidence            5

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.97  E-value=1.7e-30  Score=218.75  Aligned_cols=246  Identities=17%  Similarity=0.180  Sum_probs=182.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|+++++.|+++||+|++++|+.++.. .+.          ..+++++.+|++|++.+.++++  ++|+|||++
T Consensus         6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence            799999999999999999999999999865421 111          2478999999999999999998  899999987


Q ss_pred             CCC-----------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcE
Q 023078           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (287)
Q Consensus        81 ~~~-----------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~  146 (287)
                      +..           ..++.+++++++  +++|||++||.++..             .+...+ .+|..+|+++++.++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e~~l~~~~l~~  139 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIEQKLKKSGIPY  139 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHHHHHHHcCCCe
Confidence            632           234678999987  899999999865421             011233 78999999999999999


Q ss_pred             EEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHH
Q 023078          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       147 ~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i  226 (287)
                      +++||+.+|+..     ...+......+.++.+ .++.+.++++|++|+|+++..+++.+...+++||+++++.+|++|+
T Consensus       140 tilRp~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el  213 (317)
T CHL00194        140 TIFRLAGFFQGL-----ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEI  213 (317)
T ss_pred             EEEeecHHhhhh-----hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHH
Confidence            999999888642     1111112223344444 3456678999999999999999987666788999999999999999


Q ss_pred             HHHHHHHhCCCCCeEEEcCCCCcCCCC---------cccccc-------cccc--ccchhhHhhhhccccc
Q 023078          227 ARACAKAAGFPEPELVHYNPKEFDFGK---------KKAFPF-------RDQV--IASLKTAFSVNMVKRS  279 (287)
Q Consensus       227 ~~~i~~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~-------~~~~--~~~~~k~~~~lg~~p~  279 (287)
                      ++.+.+.+|++. .+...|....++..         ......       ....  ..+.+++.+.||+.|.
T Consensus       214 ~~~~~~~~g~~~-~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~  283 (317)
T CHL00194        214 ISLCEQLSGQKA-KISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPN  283 (317)
T ss_pred             HHHHHHHhCCCC-eEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChh
Confidence            999999999875 66666654432110         000000       0001  4467789999999984

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=8.9e-30  Score=210.58  Aligned_cols=270  Identities=19%  Similarity=0.223  Sum_probs=205.9

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc--ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      |||+||+|++|++.|++++  .+|++++..+..  ..+...       ......++++.+|+.+...+..+++  ++ .|
T Consensus        10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-------~~~~~~v~~~~~D~~~~~~i~~a~~--~~-~V   79 (361)
T KOG1430|consen   10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-------GFRSGRVTVILGDLLDANSISNAFQ--GA-VV   79 (361)
T ss_pred             ECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-------cccCCceeEEecchhhhhhhhhhcc--Cc-eE
Confidence            7999999999999999997  899999987753  111110       0013678999999999999999999  88 78


Q ss_pred             EEccCC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC---ccc-cchHH
Q 023078           77 YDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK---SRH-KGKLN  134 (287)
Q Consensus        77 i~~a~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~---~~~-~~k~~  134 (287)
                      +|+++.                |+.++.+++++|.  +++++||+||..|..........+++.+.|.   ++| .+|..
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL  159 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence            877654                5678999999998  9999999999999876655444444444443   367 99999


Q ss_pred             HHHHHHhc----CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc-----C
Q 023078          135 TESVLESK----GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG-----N  205 (287)
Q Consensus       135 ~E~~~~~~----~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~-----~  205 (287)
                      +|+++.+.    .+..+.|||+.||||++ ..+.+.+...+..+..+...++.+...++++++.++.+.+.+..     .
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYGpgd-~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~  238 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYGPGD-KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS  238 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccCCCC-ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC
Confidence            99998643    38899999999999975 45577788888888887777888889999999999998876653     2


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcC------------CC--Cccccccccc-----cccc
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FG--KKKAFPFRDQ-----VIAS  266 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~------------~~--~~~~~~~~~~-----~~~~  266 (287)
                      +...|+.|+|+++.++...+++..+.+.+|...|....+|.....            ++  .+...+.+..     +.++
T Consensus       239 ~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~  318 (361)
T KOG1430|consen  239 PSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFS  318 (361)
T ss_pred             CccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccC
Confidence            345799999999999988888889999999988643434432211            11  1111111111     2889


Q ss_pred             hhhHhhhhcccccce
Q 023078          267 LKTAFSVNMVKRSML  281 (287)
Q Consensus       267 ~~k~~~~lg~~p~~~  281 (287)
                      ++|++++|||.|...
T Consensus       319 ~~kA~~~lgY~P~~~  333 (361)
T KOG1430|consen  319 IEKAKRELGYKPLVS  333 (361)
T ss_pred             HHHHHHhhCCCCcCC
Confidence            999999999999754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.97  E-value=5.5e-30  Score=213.71  Aligned_cols=257  Identities=21%  Similarity=0.189  Sum_probs=174.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||+++++.|+++|++|++++|+..+......           ..+    .+... ..+...+.  ++|+|||++
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~----~~~~~-~~~~~~~~--~~D~Vvh~a   65 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EGY----KPWAP-LAESEALE--GADAVINLA   65 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------eee----ecccc-cchhhhcC--CCCEEEECC
Confidence            7999999999999999999999999998766321110           011    12222 33445566  899999999


Q ss_pred             CCC------------------ccchHHHHHhCC--CC--CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           81 GRE------------------ADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~------------------~~~~~~l~~a~~--~~--~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      +..                  ..++.+++++++  ++  .+||+.|+.++||.....+++|+.+..+.+++ ..+...|+
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            852                  234778888886  54  35777788888987655667777655555554 44444555


Q ss_pred             HH---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEE
Q 023078          138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (287)
Q Consensus       138 ~~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~  214 (287)
                      .+   ++.+++++++||+.+|||.+  .....+.......... ..+++++.++++|++|+|+++..+++++.. +++||
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~-~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGG-PLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCccc-ccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            43   34689999999999999963  2233333222222111 136778899999999999999999987653 46899


Q ss_pred             eeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccc--cccccchhhHhhhhcccccceee
Q 023078          215 ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFR--DQVIASLKTAFSVNMVKRSMLAF  283 (287)
Q Consensus       215 ~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~k~~~~lg~~p~~~~~  283 (287)
                      +++++++|++|+++.+.+.+|.+.  ....|.+..+..... .+..  .....+++|+++ +||+|.+..+
T Consensus       222 ~~~~~~~s~~di~~~i~~~~g~~~--~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~g~~~~~~~~  288 (292)
T TIGR01777       222 ATAPEPVRNKEFAKALARALHRPA--FFPVPAFVLRALLGE-MADLLLKGQRVLPEKLLE-AGFQFQYPDL  288 (292)
T ss_pred             ecCCCccCHHHHHHHHHHHhCCCC--cCcCCHHHHHHHhch-hhHHHhCCcccccHHHHh-cCCeeeCcCh
Confidence            999999999999999999999764  223444332211000 0111  111567888875 9999998654

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.97  E-value=2.6e-29  Score=214.87  Aligned_cols=258  Identities=18%  Similarity=0.194  Sum_probs=174.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||+++++.|+++|++|++++|+..+......     .+.. ..+++++.+|+.+.+.+.++++  ++|+|||+|
T Consensus        16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   87 (353)
T PLN02896         16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS-----KWKE-GDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA   87 (353)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----hhcc-CCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence            7999999999999999999999999987654221110     0000 2468899999999999999998  899999999


Q ss_pred             CCCc-----------------------cchHHHHHhCC---CCCcEEEEeeeeEeecCCC-----CCCCCCCC-------
Q 023078           81 GREA-----------------------DEVEPILDALP---NLEQFIYCSSAGVYLKSDL-----LPHCETDT-------  122 (287)
Q Consensus        81 ~~~~-----------------------~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~-----~~~~e~~~-------  122 (287)
                      +...                       .++.+++++|+   ++++||++||..+||....     .+++|+..       
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            8521                       23556778765   3789999999999985321     23455421       


Q ss_pred             --CCCCccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHHHHHHH---cCCCc--ccCCC---CCcee
Q 023078          123 --VDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPI--PIPGS---GIQVT  187 (287)
Q Consensus       123 --~~p~~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~---~~~~~--~~~~~---~~~~~  187 (287)
                        ..+.+.| .+|.++|.++.    .++++++++||+++|||++...+ +.++..+.   .+...  ...+.   ....+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSV-PSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCC-CchHHHHHHHhcCCccccccccccccccCce
Confidence              1133357 99999999774    46899999999999999754322 22222222   23221  11111   11246


Q ss_pred             eeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccch
Q 023078          188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASL  267 (287)
Q Consensus       188 ~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (287)
                      +|+|++|+|++++.+++.+.. ++.|++ ++.+++++|+++.+.+.++...+.+...+ ..     ....+    ...|+
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~-~~-----~~~~~----~~~~~  314 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE-EK-----RGSIP----SEISS  314 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc-cc-----cCccc----cccCH
Confidence            999999999999999987543 347865 56779999999999999974321211111 10     00001    14588


Q ss_pred             hhHhhhhcccccc
Q 023078          268 KTAFSVNMVKRSM  280 (287)
Q Consensus       268 ~k~~~~lg~~p~~  280 (287)
                      +|++ +|||+|..
T Consensus       315 ~~~~-~lGw~p~~  326 (353)
T PLN02896        315 KKLR-DLGFEYKY  326 (353)
T ss_pred             HHHH-HcCCCccC
Confidence            8886 59999985

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.96  E-value=9.6e-29  Score=208.55  Aligned_cols=238  Identities=17%  Similarity=0.226  Sum_probs=177.3

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+||||+++++.|+++|  ++|++++|+...... +.    ....  ..++.++.+|++|.+.+.++++  ++|+|||
T Consensus        10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~----~~~~--~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589        10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQ----QKFP--APCLRFFIGDVRDKERLTRALR--GVDYVVH   80 (324)
T ss_pred             eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HH----HHhC--CCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999986  789999987554211 10    0000  2468899999999999999998  8999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +|+..                ..++.++++++.  ++++||++||...              ..|.+.| .+|..+|.++
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLF  146 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHH
Confidence            99862                124677888876  7789999998532              2344567 9999999887


Q ss_pred             H-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       140 ~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      +       ..+++++++||+++|||+.  .+++.+......+. ++++. ++.+.++|+|++|++++++.++++.. .++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~-~~~  222 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLERML-GGE  222 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence            3       3589999999999999963  46666777666665 45553 56788999999999999999998743 456


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccc-cc-cccchhhHhhhhcccccce
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFR-DQ-VIASLKTAFSVNMVKRSML  281 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~k~~~~lg~~p~~~  281 (287)
                      +|+ .++..+++.|+++.+.+..+..   ..  +..          +.. .. ..+|.+|+++.|||+|.+.
T Consensus       223 ~~~-~~~~~~sv~el~~~i~~~~~~~---~~--~~~----------~g~~~~~~~~~~~~~~~~lg~~~~~~  278 (324)
T TIGR03589       223 IFV-PKIPSMKITDLAEAMAPECPHK---IV--GIR----------PGEKLHEVMITEDDARHTYELGDYYA  278 (324)
T ss_pred             EEc-cCCCcEEHHHHHHHHHhhCCee---Ee--CCC----------CCchhHhhhcChhhhhhhcCCCCeEE
Confidence            774 5566799999999998864321   11  110          110 01 1579999999999999864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=2e-28  Score=191.27  Aligned_cols=271  Identities=18%  Similarity=0.159  Sum_probs=205.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||-||+-|++|++.|+++||.|+++.|+.+......- .+.........++.++.+|++|...+..+++..+||-|+|++
T Consensus         8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa   86 (345)
T COG1089           8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA   86 (345)
T ss_pred             ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence            7999999999999999999999999998654222110 111111222456889999999999999999999999999999


Q ss_pred             CCCc----------------cchHHHHHhCC--C--CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH-
Q 023078           81 GREA----------------DEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV-  138 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~--~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~-  138 (287)
                      ++..                .++.+++++++  +  ..||...||...||.....|..|+.+..|.++| .+|..+--+ 
T Consensus        87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089          87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence            9842                35889999988  3  468999999999999998899999999999999 888766533 


Q ss_pred             ---HHhcCCcEEEEccCceecCCCCCchhHH----HHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          139 ---LESKGVNWTSLRPVYIYGPLNYNPVEEW----FFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       139 ---~~~~~~~~~ilr~~~v~g~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                         -+.+|+..|.=...+--+|.....|...    -+.+++.|.. ....|+-+..+||-|..|.+++++.+++++.  .
T Consensus       167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~--P  244 (345)
T COG1089         167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE--P  244 (345)
T ss_pred             eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC--C
Confidence               2567888777666666666544444333    3344455543 2334788999999999999999999999876  4


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCC-----------------eEEEcCCCCcCCCCcccccccccc-ccchhhHhh
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEP-----------------ELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFS  272 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~  272 (287)
                      ..|.++.+...|++|+++...+..|.+..                 .++.+++..+       .|-.-.. ..|++|+++
T Consensus       245 ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~f-------RPaEV~~Llgdp~KA~~  317 (345)
T COG1089         245 DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYF-------RPAEVDLLLGDPTKAKE  317 (345)
T ss_pred             CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECcccc-------CchhhhhhcCCHHHHHH
Confidence            68999999999999999999999996542                 2233332222       2222222 889999999


Q ss_pred             hhcccccce
Q 023078          273 VNMVKRSML  281 (287)
Q Consensus       273 ~lg~~p~~~  281 (287)
                      .|||+|...
T Consensus       318 ~LGW~~~~~  326 (345)
T COG1089         318 KLGWRPEVS  326 (345)
T ss_pred             HcCCccccC
Confidence            999999864

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=3.7e-28  Score=209.14  Aligned_cols=224  Identities=22%  Similarity=0.237  Sum_probs=173.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||||+||+++++.|+++|++|++++|+..+......   .........+++++.+|++|.+.+.++++..  ++|+|||
T Consensus        66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~  142 (390)
T PLN02657         66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG---KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS  142 (390)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch---hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence            7999999999999999999999999998754211100   0001111357899999999999999999843  5999999


Q ss_pred             ccCCC-----------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh--c
Q 023078           79 INGRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES--K  142 (287)
Q Consensus        79 ~a~~~-----------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~--~  142 (287)
                      +++..           ..++.+++++++  ++++||++||.++++              |...| .+|...|+.+.+  .
T Consensus       143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~l~~~~~  208 (390)
T PLN02657        143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAELQALDS  208 (390)
T ss_pred             CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHHHHhccC
Confidence            87642           234678888876  889999999987752              22234 789999988865  7


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCcee-eeeeHHHHHHHHHHHhcCCcCCCceEEeeCC-Cc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT-QLGHVKDLARAFVQVLGNEKASRQVFNISGE-KY  220 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~-~~  220 (287)
                      +++++++||+.+||+      ...++..+..++++.++++++..+ ++||++|+|+++..+++++...+++||++++ +.
T Consensus       209 gl~~tIlRp~~~~~~------~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~  282 (390)
T PLN02657        209 DFTYSIVRPTAFFKS------LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKA  282 (390)
T ss_pred             CCCEEEEccHHHhcc------cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcc
Confidence            899999999999986      223455667777776778777654 5799999999999999776556789999986 57


Q ss_pred             ccHHHHHHHHHHHhCCCCCeEEEcCCCC
Q 023078          221 VTFDGLARACAKAAGFPEPELVHYNPKE  248 (287)
Q Consensus       221 ~s~~~i~~~i~~~~g~~~~~~~~~~~~~  248 (287)
                      +|++|+++.+.+.+|++. .+...+.+.
T Consensus       283 ~S~~Eia~~l~~~lG~~~-~~~~vp~~~  309 (390)
T PLN02657        283 LTPLEQGEMLFRILGKEP-KFFKVPIQI  309 (390)
T ss_pred             cCHHHHHHHHHHHhCCCC-ceEEcCHHH
Confidence            999999999999999774 667666554

>PRK05865 hypothetical protein; Provisional

Probab=99.96  E-value=6.8e-28  Score=220.60  Aligned_cols=228  Identities=21%  Similarity=0.253  Sum_probs=169.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||+++++.|+++|++|++++|+....   .           ..+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus         6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA   69 (854)
T PRK05865          6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA   69 (854)
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence            79999999999999999999999999975321   1           1367889999999999999998  899999999


Q ss_pred             CCC-------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEcc
Q 023078           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (287)
Q Consensus        81 ~~~-------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~  151 (287)
                      +..       ..++.+++++++  ++++||++||..                        |.++|+++++++++++++||
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp  125 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC  125 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence            763       346788899887  788999999852                        78899999889999999999


Q ss_pred             CceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHH
Q 023078          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~  231 (287)
                      +++|||+.     ..++..+.. .++...+++...++|+|++|+|+++..+++.....+++||+++++.+|++|+++.+.
T Consensus       126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~  199 (854)
T PRK05865        126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALG  199 (854)
T ss_pred             ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHh
Confidence            99999952     222333222 222223455667899999999999999987544456799999999999999999987


Q ss_pred             HHhCCCCCeEEEcCCCCcCCCCcc-ccccccccccchhhHhhhhcccccc
Q 023078          232 KAAGFPEPELVHYNPKEFDFGKKK-AFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +... +.+....     ...+... .........+|++|++++|||+|.+
T Consensus       200 ~~~~-~v~~~~~-----~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~  243 (854)
T PRK05865        200 RPMV-PIGSPVL-----RRVTSFAELELLHSAPLMDVTLLRDRWGFQPAW  243 (854)
T ss_pred             hhhc-cCCchhh-----hhccchhhhhcccCCccCCHHHHHHHhCCCCCC
Confidence            7432 1001000     0001000 0000001167999999999999975

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=3.4e-27  Score=208.18  Aligned_cols=236  Identities=13%  Similarity=0.131  Sum_probs=168.2

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecCCcccccc--C-----CCCCchhhh---------hhcCCcEEEEecCC--
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQ--L-----PGESDQEFA---------EFSSKILHLKGDRK--   59 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~--~-----~~~~~~~~~---------~~~~~~~~~~~d~~--   59 (287)
                      ||||||+|++|++.|++.+   .+|+++.|..+.....  +     .......+.         ....+++++.||++  
T Consensus        17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~   96 (491)
T PLN02996         17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD   96 (491)
T ss_pred             eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence            8999999999999999864   3789999976532111  0     000000000         00257899999998  


Q ss_pred             -----ChHHHHhhhccCCccEEEEccCC-------------CccchHHHHHhCC---CCCcEEEEeeeeEeecCCC----
Q 023078           60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----  114 (287)
Q Consensus        60 -----~~~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~----  114 (287)
                           +.+.+..+++  ++|+|||+|+.             |+.++.+++++++   ++++|||+||.++||...+    
T Consensus        97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E  174 (491)
T PLN02996         97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE  174 (491)
T ss_pred             CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence                 4455667777  89999999986             3446788888875   6789999999999986321    


Q ss_pred             CCCCCCC-----------------------------------------------CCCCCccc-cchHHHHHHHHh--cCC
Q 023078          115 LPHCETD-----------------------------------------------TVDPKSRH-KGKLNTESVLES--KGV  144 (287)
Q Consensus       115 ~~~~e~~-----------------------------------------------~~~p~~~~-~~k~~~E~~~~~--~~~  144 (287)
                      .++.+..                                               ...+.+.| .+|..+|.++++  .++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l  254 (491)
T PLN02996        175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL  254 (491)
T ss_pred             ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence            1111000                                               01122346 999999999965  479


Q ss_pred             cEEEEccCceecCCCCC--chh------HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC---cCCCceE
Q 023078          145 NWTSLRPVYIYGPLNYN--PVE------EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVF  213 (287)
Q Consensus       145 ~~~ilr~~~v~g~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~~~~~  213 (287)
                      +++++||++|||+.+..  .++      ..++.....|....+++++++.+|++|++|++++++.++.+.   ...+++|
T Consensus       255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY  334 (491)
T PLN02996        255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY  334 (491)
T ss_pred             CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence            99999999999987522  111      223334455666567789999999999999999999988752   1245799


Q ss_pred             EeeCC--CcccHHHHHHHHHHHhCCCC
Q 023078          214 NISGE--KYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       214 ~~~~~--~~~s~~~i~~~i~~~~g~~~  238 (287)
                      |++++  .++|+.++++.+.+.++...
T Consensus       335 Ni~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        335 HVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             EecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            99998  88999999999999888543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=3.6e-27  Score=184.37  Aligned_cols=211  Identities=26%  Similarity=0.330  Sum_probs=158.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++|+..|.+.||+|++++|++.+....+.           ..+.       ..+.+.+.... ++|+|||+|
T Consensus         4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~~-~~DavINLA   64 (297)
T COG1090           4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALTL-GIDAVINLA   64 (297)
T ss_pred             eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhcccC-CCCEEEECC
Confidence            7999999999999999999999999999888544432           1221       22333333331 699999999


Q ss_pred             CCCcc------------------chHHHHHhC---C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc----cchHH
Q 023078           81 GREAD------------------EVEPILDAL---P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH----KGKLN  134 (287)
Q Consensus        81 ~~~~~------------------~~~~l~~a~---~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~----~~k~~  134 (287)
                      |.++.                  .++.+++++   + +.+.||.-|.++.||......++|+.+.  .+.+    +..|+
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~--g~~Fla~lc~~WE  142 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPP--GDDFLAQLCQDWE  142 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCC--CCChHHHHHHHHH
Confidence            98543                  355565553   3 7778999999999999888889988432  2222    44455


Q ss_pred             HHHHH-HhcCCcEEEEccCceecCCCCCchhHHHHH--HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          135 TESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH--RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       135 ~E~~~-~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      -|..- ++.+.+++++|.|+|.++.  +.++..+..  +.--|.++   |++.|.++|||++|+++++..++++....| 
T Consensus       143 ~~a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-  216 (297)
T COG1090         143 EEALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQLSG-  216 (297)
T ss_pred             HHHhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCCCC-
Confidence            45443 3458999999999999984  333333322  33334444   899999999999999999999999977554 


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      .||+++|.|++.+++...+.+.++++.
T Consensus       217 p~N~taP~PV~~~~F~~al~r~l~RP~  243 (297)
T COG1090         217 PFNLTAPNPVRNKEFAHALGRALHRPA  243 (297)
T ss_pred             cccccCCCcCcHHHHHHHHHHHhCCCc
Confidence            899999999999999999999999774

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7e-27  Score=215.55  Aligned_cols=227  Identities=21%  Similarity=0.260  Sum_probs=166.8

Q ss_pred             CCcccchHHHHHHHHH--HCCCeEEEEecCCccccccCCCCCchhhh-hh-cCCcEEEEecCCCh------HHHHhhhcc
Q 023078            1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFA-EF-SSKILHLKGDRKDY------DFVKSSLSA   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~--~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~d~~~~------~~~~~~~~~   70 (287)
                      ||||||||++|++.|+  +.|++|++++|+.....  +.     .+. .. ..+++++.+|++|+      +.+.++ + 
T Consensus         6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~~-----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~-   76 (657)
T PRK07201          6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--LE-----ALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G-   76 (657)
T ss_pred             eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--HH-----HHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c-
Confidence            7999999999999999  47899999999653311  00     000 00 15789999999884      445554 5 


Q ss_pred             CCccEEEEccCC-------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCC---CCCCccc-cc
Q 023078           71 KGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDPKSRH-KG  131 (287)
Q Consensus        71 ~~~d~vi~~a~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~---~~p~~~~-~~  131 (287)
                       ++|+|||+|+.             |..++.+++++++  ++++|||+||..+||.... +.+|+..   ..+.+.| .+
T Consensus        77 -~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~s  154 (657)
T PRK07201         77 -DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRT  154 (657)
T ss_pred             -CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHH
Confidence             89999999974             3456888899887  7899999999999986533 2334332   2233446 99


Q ss_pred             hHHHHHHHH-hcCCcEEEEccCceecCCCCCc--------hhHHHHHHHHcC-CCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          132 KLNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       132 k~~~E~~~~-~~~~~~~ilr~~~v~g~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      |+++|++++ ..+++++++||+++||+...+.        ++..++..+... ..+...+.+....+++|++|+++++..
T Consensus       155 K~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~  234 (657)
T PRK07201        155 KFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDH  234 (657)
T ss_pred             HHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHH
Confidence            999999987 4689999999999999864321        111122232111 122333455667899999999999999


Q ss_pred             HhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      +++.+...+++||++++++++++|+++.+.+.+|.+.
T Consensus       235 ~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        235 LMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             HhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            9887655678999999999999999999999999765

>PLN02583 cinnamoyl-CoA reductase

Probab=99.95  E-value=3.5e-26  Score=190.80  Aligned_cols=250  Identities=15%  Similarity=0.110  Sum_probs=169.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc--ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||+++++.|+++||+|++++|+.....  ..+.     .+.....+++++.+|++|.+.+.+++.  ++|.|+|
T Consensus        12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~   84 (297)
T PLN02583         12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIR-----GLSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC   84 (297)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHH-----hcccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999999999999643211  0010     000002468889999999999999998  8999999


Q ss_pred             ccCC--------------CccchHHHHHhCC---CCCcEEEEeeeeEeec--C---CCCCCCCCCCCCCC------ccc-
Q 023078           79 INGR--------------EADEVEPILDALP---NLEQFIYCSSAGVYLK--S---DLLPHCETDTVDPK------SRH-  129 (287)
Q Consensus        79 ~a~~--------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~--~---~~~~~~e~~~~~p~------~~~-  129 (287)
                      .++.              |..++.++++++.   +++|+|++||..++..  .   ...+.+|+....+.      ..| 
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            7643              2346788899875   4789999999876531  1   12245555432221      146 


Q ss_pred             cchHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      .+|..+|+++.    +.+++++++||+++|||......      ....+.. ....  ...+++||++|+|++++.+++.
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~~~~~~~-~~~~--~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN------PYLKGAA-QMYE--NGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch------hhhcCCc-ccCc--ccCcceEEHHHHHHHHHHHhcC
Confidence            89999999873    46899999999999999743211      1122221 1112  2346899999999999999997


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccc
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKR  278 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  278 (287)
                      +... +.|++.++....+.++++.+.+.++.-. .....+.  .       .+......++++|+++ |||+.
T Consensus       236 ~~~~-~r~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~--~-------~~~~~~~~~~~~k~~~-l~~~~  296 (297)
T PLN02583        236 VSSY-GRYLCFNHIVNTEEDAVKLAQMLSPLIP-SPPPYEM--Q-------GSEVYQQRIRNKKLNK-LMEDF  296 (297)
T ss_pred             cccC-CcEEEecCCCccHHHHHHHHHHhCCCCC-CCCcccc--c-------CCCccccccChHHHHH-hCccc
Confidence            6644 4799987764556789999999888431 2111110  0       0001111678899975 99874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=5.5e-26  Score=188.85  Aligned_cols=248  Identities=17%  Similarity=0.189  Sum_probs=177.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CC-ccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~-~d~   75 (287)
                      |||||++|+++++.|+++|++|++++|++++..              ..+++.+.+|+.|++.+.++++.    .+ +|.
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            799999999999999999999999999976521              24677788999999999999831    26 999


Q ss_pred             EEEccCCCc---cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhc-CCcEEEE
Q 023078           76 VYDINGREA---DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL  149 (287)
Q Consensus        76 vi~~a~~~~---~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~-~~~~~il  149 (287)
                      |+|+++...   ....+++++++  +++|||++||.+++..                 ...+...|+++++. +++++++
T Consensus        71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~~~~~~~~~~l~~~~gi~~til  133 (285)
T TIGR03649        71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------GPAMGQVHAHLDSLGGVEYTVL  133 (285)
T ss_pred             EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------CchHHHHHHHHHhccCCCEEEE
Confidence            999987532   34677888876  9999999998754211                 01234567777775 9999999


Q ss_pred             ccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHH
Q 023078          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (287)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~  229 (287)
                      ||+++|++... .   .+...+.....+. .+.++..++|++++|+|+++..++..+...++.|++++++.+|++|+++.
T Consensus       134 Rp~~f~~~~~~-~---~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~  208 (285)
T TIGR03649       134 RPTWFMENFSE-E---FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEI  208 (285)
T ss_pred             eccHHhhhhcc-c---ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHH
Confidence            99998876311 1   1112233333333 34567789999999999999999988665678999999999999999999


Q ss_pred             HHHHhCCCCCeEEEcCCCCcCCC--Ccccccc------------cccc-ccchhhHhhhhcccccceeeee
Q 023078          230 CAKAAGFPEPELVHYNPKEFDFG--KKKAFPF------------RDQV-IASLKTAFSVNMVKRSMLAFYI  285 (287)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~------------~~~~-~~~~~k~~~~lg~~p~~~~~~~  285 (287)
                      +.+.+|++. .....+...+...  .....+.            .... ...+....+.+|.+|..+..|+
T Consensus       209 l~~~~g~~v-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~  278 (285)
T TIGR03649       209 LSRVLGRKI-THVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPRGFRDFA  278 (285)
T ss_pred             HHHHhCCce-EEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCccHHHHH
Confidence            999999886 6666665543210  0000000            0000 1135566777899998877664

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=2.2e-25  Score=191.74  Aligned_cols=233  Identities=19%  Similarity=0.227  Sum_probs=161.5

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcccc--ccCCCCCchh-h--hhhc-CCcEEEEecCCCh------HHHHh
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA--QQLPGESDQE-F--AEFS-SKILHLKGDRKDY------DFVKS   66 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~--~~~~~~~~~~-~--~~~~-~~~~~~~~d~~~~------~~~~~   66 (287)
                      ||||||+|++|++.|+++|  ++|++++|+.+...  +.+....... +  .... .+++++.+|++++      +.+..
T Consensus         5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~   84 (367)
T TIGR01746         5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER   84 (367)
T ss_pred             eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence            7999999999999999998  67999999865311  0000000000 0  0001 4789999998753      45666


Q ss_pred             hhccCCccEEEEccCC-------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCC-----CCC
Q 023078           67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPK  126 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-----~p~  126 (287)
                      +.+  ++|+|||+++.             |..++.++++++.  +.++|+++||.++|+.....+..++...     .+.
T Consensus        85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR01746        85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA  162 (367)
T ss_pred             HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence            666  89999999884             3456778888876  6778999999999976433222333221     122


Q ss_pred             ccc-cchHHHHHHHHh---cCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          127 SRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~~---~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      +.| .+|+.+|.++++   .+++++++||+.++|+...+     .++..++.........+  .......+++|++|+++
T Consensus       163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~vddva~  240 (367)
T TIGR01746       163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTEDLTPVDYVAR  240 (367)
T ss_pred             CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCccccCcccHHHHHH
Confidence            346 999999998753   48999999999999974322     22223333333322221  22223578999999999


Q ss_pred             HHHHHhcCCcC--CCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          198 AFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      +++.++.....  .+++||++++++++++|+++.+.+ .|.+.
T Consensus       241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~  282 (367)
T TIGR01746       241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL  282 (367)
T ss_pred             HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence            99999877543  278999999999999999999999 88775

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=1.5e-24  Score=180.73  Aligned_cols=197  Identities=14%  Similarity=0.129  Sum_probs=146.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|+...+                             |+.+.+.+...++..++|+|||+|
T Consensus        15 tG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------------~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778         15 YGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------------RLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------------ccCCHHHHHHHHHhcCCCEEEECC
Confidence            799999999999999999999875321                             233445566666655899999999


Q ss_pred             CCC-------------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCC------CCCCCCCCCCC-CCccc-cc
Q 023078           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVD-PKSRH-KG  131 (287)
Q Consensus        81 ~~~-------------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~------~~~~~e~~~~~-p~~~~-~~  131 (287)
                      +..                   ..++.+++++|+  ++ +++++||..+|+...      ..+++|+..+. |.+.| .+
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s  144 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT  144 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence            863                   124677889887  66 467778888887432      22366665554 44677 99


Q ss_pred             hHHHHHHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       132 k~~~E~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      |.++|.+++.+. +..++|+...+|+...  ....++..+..++.+...+     .+++|++|++++++.+++...  ++
T Consensus       145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence            999999998654 6778999887876421  1234667777776543322     379999999999999987643  35


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCC
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~  237 (287)
                      +||++++.++|+.|+++.+.+.+|..
T Consensus       215 ~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        215 IYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            99999999999999999999999954

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.93  E-value=1.4e-25  Score=180.54  Aligned_cols=214  Identities=19%  Similarity=0.287  Sum_probs=160.0

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhh--hcCCcE----EEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKIL----HLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      |||+|.||+.|+++|++.+ .++++++|++.+.....     .++..  ...++.    ++.+|++|.+.+..+++..++
T Consensus         4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~-----~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p   78 (293)
T PF02719_consen    4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELE-----RELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP   78 (293)
T ss_dssp             ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHH-----HHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred             EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHH-----HHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence            7999999999999999986 68999999987632211     11111  123343    458999999999999999999


Q ss_pred             cEEEEccCC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           74 DVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        74 d~vi~~a~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      |+|+|.|+.                |+.++.|+++++.  ++++||++||..+              .+|.+.+ .+|..
T Consensus        79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrl  144 (293)
T PF02719_consen   79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRL  144 (293)
T ss_dssp             SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHH
T ss_pred             CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHH
Confidence            999999997                4567999999987  9999999999754              4677887 99999


Q ss_pred             HHHHHHh-------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          135 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       135 ~E~~~~~-------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      +|+++..       .+..++++|.|+|.|.  .+++++.|.+++++|+++.+ .+++..+-|+.+++.++.++.+.....
T Consensus       145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS--~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~  221 (293)
T PF02719_consen  145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGS--RGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK  221 (293)
T ss_dssp             HHHHHHHHCCTSSSS--EEEEEEE-EETTG--TTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHhhhCCCCCcEEEEEEecceecC--CCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC
Confidence            9999853       2468999999999998  58899999999999999887 567889999999999999999887655


Q ss_pred             CCCceEEeeCCCcccHHHHHHHHHHHhCCC
Q 023078          208 ASRQVFNISGEKYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       208 ~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~  237 (287)
                       .|++|.+--|.+++..|+++.+.+..|..
T Consensus       222 -~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  222 -GGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             -TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             -CCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence             57899999989999999999999999943

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=1.3e-24  Score=169.86  Aligned_cols=259  Identities=22%  Similarity=0.257  Sum_probs=195.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|||||+|++++.+|.+.|.+|++-.|.++....++..-      .....+-++..|+.|+++++++.+  ..++|||+.
T Consensus        67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm------GdLGQvl~~~fd~~DedSIr~vvk--~sNVVINLI  138 (391)
T KOG2865|consen   67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM------GDLGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI  138 (391)
T ss_pred             ecccccccHHHHHHHhhcCCeEEEeccCCccchhheeec------ccccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence            599999999999999999999999999876644333210      002357788999999999999999  899999999


Q ss_pred             CC------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCc
Q 023078           81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVN  145 (287)
Q Consensus        81 ~~------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~  145 (287)
                      |.            +....+.+...|+  |+.|||++|+.++            . ....+.+ ++|.+.|..+++.-..
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga------------n-v~s~Sr~LrsK~~gE~aVrdafPe  205 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA------------N-VKSPSRMLRSKAAGEEAVRDAFPE  205 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc------------c-ccChHHHHHhhhhhHHHHHhhCCc
Confidence            87            3445777888887  9999999998764            1 2223345 9999999999988889


Q ss_pred             EEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCC-CceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHH
Q 023078          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       146 ~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~  224 (287)
                      .+|+||+.+||..  +.++.++.....+-..+++++.+ +..-..+++-|+|.+++.++..+...|.+|.+.+|+.....
T Consensus       206 AtIirPa~iyG~e--Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~  283 (391)
T KOG2865|consen  206 ATIIRPADIYGTE--DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLS  283 (391)
T ss_pred             ceeechhhhcccc--hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHH
Confidence            9999999999984  45666666666666777777766 45678999999999999999999889999999999999999


Q ss_pred             HHHHHHHHHhCCCCCeEEEcCCCCcC-------C--CC-ccccccccc--------c-ccchhhHhhhhcccccceee
Q 023078          225 GLARACAKAAGFPEPELVHYNPKEFD-------F--GK-KKAFPFRDQ--------V-IASLKTAFSVNMVKRSMLAF  283 (287)
Q Consensus       225 ~i~~~i~~~~g~~~~~~~~~~~~~~~-------~--~~-~~~~~~~~~--------~-~~~~~k~~~~lg~~p~~~~~  283 (287)
                      |+++.+-+...... .+...+.+.+.       +  .+ ....|....        . .++....+++||..++.+..
T Consensus       284 eLvd~my~~~~~~~-ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t~le~  360 (391)
T KOG2865|consen  284 ELVDIMYDMAREWP-RYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLTKLEL  360 (391)
T ss_pred             HHHHHHHHHHhhcc-ccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceeeeccc
Confidence            99999988776432 44444432211       0  00 000111111        1 67777788889988776543

>PRK12320 hypothetical protein; Provisional

Probab=99.92  E-value=5.2e-24  Score=191.52  Aligned_cols=216  Identities=13%  Similarity=0.102  Sum_probs=154.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|+++|++|++++|.+...   .           ..+++++.+|+.+.. +.+++.  ++|+|||++
T Consensus         6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~-----------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA   68 (699)
T PRK12320          6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---L-----------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA   68 (699)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---c-----------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence            79999999999999999999999999865431   1           246889999999884 777777  899999999


Q ss_pred             CCC--------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEc
Q 023078           81 GRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (287)
Q Consensus        81 ~~~--------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr  150 (287)
                      +..        ..++.+++++|+  ++ ++||+||.  +|...              .|   ..+|.++..++++++++|
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~---~~aE~ll~~~~~p~~ILR  128 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LY---RQAETLVSTGWAPSLVIR  128 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------cc---cHHHHHHHhcCCCEEEEe
Confidence            853        345788999987  65 79999976  32110              01   147888887889999999


Q ss_pred             cCceecCCCCC---chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHH
Q 023078          151 PVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       151 ~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~  227 (287)
                      ++++|||....   .++..++.....+          +.+.++|++|++++++.+++...  +++||+++++.+|++|++
T Consensus       129 ~~nVYGp~~~~~~~r~I~~~l~~~~~~----------~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~  196 (699)
T PRK12320        129 IAPPVGRQLDWMVCRTVATLLRSKVSA----------RPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAW  196 (699)
T ss_pred             CceecCCCCcccHhHHHHHHHHHHHcC----------CceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHH
Confidence            99999996432   2233333322222          23446999999999999987643  349999999999999999


Q ss_pred             HHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          228 RACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       228 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +.+........  +.  ....         +  ....-|+..++..++|.|..
T Consensus       197 ~~i~~~~p~~~--~~--~~~~---------~--~~~~pdi~~a~~~~~w~~~~  234 (699)
T PRK12320        197 RLLRSVDPHLR--TR--RVRS---------W--EQLIPEVDIAAVQEDWNFEF  234 (699)
T ss_pred             HHHHHhCCCcc--cc--cccc---------H--HHhCCCCchhhhhcCCCCcc
Confidence            99976632221  11  1000         0  01145667777778888764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.1e-23  Score=180.34  Aligned_cols=213  Identities=21%  Similarity=0.293  Sum_probs=182.2

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||+|-+|+.+++++++.+ .+++.++|++.+....     +.++...  ...+.++-||+.|.+.+..+++.+++|+|+
T Consensus       256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i-----~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLI-----DMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHH-----HHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            8999999999999999986 6899999988763211     1222221  357788899999999999999977899999


Q ss_pred             EccCC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        78 ~~a~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      |.|+.                |+-+++|++++|.  ++++||.+||..+              .+|.+.+ .+|..+|++
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~PtNvmGaTKr~aE~~  396 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPTNVMGATKRLAEKL  396 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCchHhhHHHHHHHHH
Confidence            99986                4568999999987  9999999999754              5678877 999999998


Q ss_pred             HHhc-------CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          139 LESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       139 ~~~~-------~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      +...       +..++.+|.|||.|.  ++++++-|.+++.+|+++++ .+++..+-|+.+.|.++.++.+....+ .|+
T Consensus       397 ~~a~~~~~~~~~T~f~~VRFGNVlGS--rGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~-gGe  472 (588)
T COG1086         397 FQAANRNVSGTGTRFCVVRFGNVLGS--RGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK-GGE  472 (588)
T ss_pred             HHHHhhccCCCCcEEEEEEecceecC--CCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC-CCc
Confidence            8432       378999999999998  58899999999999999887 678899999999999999999988755 689


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCC
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~  236 (287)
                      +|-+--|++++..|+++.+.+..|.
T Consensus       473 ifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         473 IFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             EEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            9999999999999999999999983

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=7.9e-24  Score=160.18  Aligned_cols=246  Identities=20%  Similarity=0.252  Sum_probs=183.6

Q ss_pred             CCcccchHHHHHHHHHHCCCe--EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~--V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||++|.+|++|.+.+.++|.+  --++..+                         -.+|+++.++.+++|+..+|..|||
T Consensus         7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------------kd~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------------KDADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             ecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------------ccccccchHHHHHHHhccCCceeee
Confidence            799999999999999998752  1111111                         1468999999999999999999999


Q ss_pred             ccCC-----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC----CCCCCcc-c-cchH
Q 023078           79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL  133 (287)
Q Consensus        79 ~a~~-----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~----~~~p~~~-~-~~k~  133 (287)
                      +|+.                 |..-..|++..+.  +++++++..|.++|.+....|++|..    ++.|.++ | -.|.
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9875                 1222456676665  99999999999999887777888864    5566666 4 5565


Q ss_pred             HHH----HHHHhcCCcEEEEccCceecCCC-----CCchhHHHHHHHH----cCC-CcccCCCCCceeeeeeHHHHHHHH
Q 023078          134 NTE----SVLESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLK----AGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       134 ~~E----~~~~~~~~~~~ilr~~~v~g~~~-----~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      ++.    .+..++|..++.+-|.++|||-+     .+-+++.+++++.    ++. ++.+||++...+.|+|++|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            443    23467899999999999999963     3445566555443    333 678899999999999999999999


Q ss_pred             HHHhcCCcCCCceEEeeCCC--cccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhccc
Q 023078          200 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVK  277 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~--~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  277 (287)
                      ++++.+-. .-+..+++.++  .+|.+|+++++.++++... +...-....         .+...+.+|++|+++ |+|.
T Consensus       222 i~vlr~Y~-~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G-~l~~DttK~---------DGq~kKtasnsKL~s-l~pd  289 (315)
T KOG1431|consen  222 IWVLREYE-GVEPIILSVGESDEVTIREAAEAVVEAVDFTG-KLVWDTTKS---------DGQFKKTASNSKLRS-LLPD  289 (315)
T ss_pred             HHHHHhhc-CccceEeccCccceeEHHHHHHHHHHHhCCCc-eEEeeccCC---------CCCcccccchHHHHH-hCCC
Confidence            99998744 23567777776  7999999999999999987 544332221         111222789999986 9999


Q ss_pred             ccceee
Q 023078          278 RSMLAF  283 (287)
Q Consensus       278 p~~~~~  283 (287)
                      |.+..+
T Consensus       290 ~~ft~l  295 (315)
T KOG1431|consen  290 FKFTPL  295 (315)
T ss_pred             cccChH
Confidence            987644

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.91  E-value=4.4e-24  Score=165.89  Aligned_cols=175  Identities=31%  Similarity=0.471  Sum_probs=136.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||||++|+.++++|+++|++|++++|++.+..+             ..+++++.+|+.|++.+.++++  ++|+||+++
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~   68 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA   68 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence            6999999999999999999999999999887433             2689999999999999999999  999999999


Q ss_pred             CCC---ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEccCcee
Q 023078           81 GRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        81 ~~~---~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~~~v~  155 (287)
                      +..   ....++++++++  +++|+|++|+.++|+..... ........+..++..|..+|+.+++.+++|+++||+.+|
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~  147 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGL-FSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY  147 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSE-EEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred             hhhcccccccccccccccccccccceeeeccccCCCCCcc-cccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence            854   345677888876  89999999999987643331 111111122234488889999999999999999999999


Q ss_pred             cCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      |+....             ..+.. ..+....++|+.+|+|++++.++++
T Consensus       148 ~~~~~~-------------~~~~~-~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  148 GNPSRS-------------YRLIK-EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             BTTSSS-------------EEEES-STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             eCCCcc-------------eeEEe-ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            995321             11111 1334556999999999999998864

...

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.90  E-value=6.1e-24  Score=172.79  Aligned_cols=196  Identities=20%  Similarity=0.195  Sum_probs=112.4

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCcc--ccc----cCCCCCch-hh-hhhcCCcEEEEecCCCh------HHH
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP--IAQ----QLPGESDQ-EF-AEFSSKILHLKGDRKDY------DFV   64 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~--~~~----~~~~~~~~-~~-~~~~~~~~~~~~d~~~~------~~~   64 (287)
                      ||||||+|++|+++|++++.  +|+++.|..+.  ..+    .+...... .. .....+++++.||++++      +.+
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~   81 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY   81 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence            89999999999999999876  99999998744  111    11111100 00 02257999999999874      566


Q ss_pred             HhhhccCCccEEEEccCC-------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCC----------
Q 023078           65 KSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE----------  119 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e----------  119 (287)
                      ..+.+  .+|+|||+|+.             |+.+++++++.|.  +.++|+|+||..+.+.... ...+          
T Consensus        82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~~~  158 (249)
T PF07993_consen   82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEEEDDL  158 (249)
T ss_dssp             HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH--EE
T ss_pred             hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-cccccccccccccc
Confidence            66666  89999999986             4567999999987  5669999999545443322 1111          


Q ss_pred             CCCCCCCccc-cchHHHHHHHHh----cCCcEEEEccCceecCCC-----CCchhHH-HHHHHHcCCCcccCCCCCceee
Q 023078          120 TDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN-----YNPVEEW-FFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       120 ~~~~~p~~~~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      .......+.| .+|+.+|+++++    .+++++|+|||.|+|...     ...+... +...+..+......+..+...+
T Consensus       159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  238 (249)
T PF07993_consen  159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD  238 (249)
T ss_dssp             E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence            1112223346 999999999853    389999999999999532     2232333 3334444443334455556799


Q ss_pred             eeeHHHHHHHH
Q 023078          189 LGHVKDLARAF  199 (287)
Q Consensus       189 ~i~~~Dva~~~  199 (287)
                      ++++|.+|+++
T Consensus       239 ~vPVD~va~aI  249 (249)
T PF07993_consen  239 LVPVDYVARAI  249 (249)
T ss_dssp             EEEHHHHHHHH
T ss_pred             EECHHHHHhhC
Confidence            99999999985

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.90  E-value=3.4e-23  Score=158.88  Aligned_cols=272  Identities=16%  Similarity=0.145  Sum_probs=189.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC-chhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||-||.-|++|++.|+++||+|+++.|+.++.....-+.. ..+..-......++.+|++|...+.+++...+|+-|+|+
T Consensus        34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL  113 (376)
T KOG1372|consen   34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL  113 (376)
T ss_pred             ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence            7999999999999999999999999998765321111000 000111125678899999999999999999999999999


Q ss_pred             cCCC----------------ccchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      +++.                ..++.++++|++     ..-||...||...||+..+.|-.|..+..|.++| .+|..+-=
T Consensus       114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence            9874                346788888854     4458999999999999888899999999999998 76665422


Q ss_pred             H----HHhcCCcEEEEccCceec---CCCCCchhHH-HHH---HHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          138 V----LESKGVNWTSLRPVYIYG---PLNYNPVEEW-FFH---RLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       138 ~----~~~~~~~~~ilr~~~v~g---~~~~~~~~~~-~~~---~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      +    -+.+++-.|   .|.+|-   |.....|... +.+   ++.-++. ....|+.+..+||-|..|-+++++.++++
T Consensus       194 ivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  194 IVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             EEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc
Confidence            1    134454333   344443   3333344333 222   2222332 22347778899999999999999999998


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCC-------------cCCCCcccccccccc-ccchhhHh
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKE-------------FDFGKKKAFPFRDQV-IASLKTAF  271 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~-~~~~~k~~  271 (287)
                      +.+  ..|.++.++..|.+|+++.....+|...    .+....             +++.++-+.|-.-+. .-|.+|++
T Consensus       271 d~P--dDfViATge~hsVrEF~~~aF~~ig~~l----~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk  344 (376)
T KOG1372|consen  271 DSP--DDFVIATGEQHSVREFCNLAFAEIGEVL----NWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAK  344 (376)
T ss_pred             CCC--CceEEecCCcccHHHHHHHHHHhhCcEE----eecccccccccccCCceEEEEecccccCcchhhhhcCChHHHH
Confidence            764  5799999999999999999999888432    121111             111222222222222 78999999


Q ss_pred             hhhcccccce
Q 023078          272 SVNMVKRSML  281 (287)
Q Consensus       272 ~~lg~~p~~~  281 (287)
                      +.|||+|...
T Consensus       345 ~~LgW~pkv~  354 (376)
T KOG1372|consen  345 KTLGWKPKVT  354 (376)
T ss_pred             HhhCCCCccC
Confidence            9999999764

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.90  E-value=1.3e-22  Score=165.47  Aligned_cols=207  Identities=17%  Similarity=0.132  Sum_probs=147.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhh-ccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~-~~~~~d~vi~   78 (287)
                      |||||++|+.+++.|+++|++|++++|+.++....+..         ..+++++.+|+++ .+.+.+.+ .  ++|+||+
T Consensus        23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~   91 (251)
T PLN00141         23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC   91 (251)
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence            79999999999999999999999999987653322211         2468899999988 46676666 5  7999999


Q ss_pred             ccCCCc------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC-CCCCCccc-cchHHHHHHHHhc
Q 023078           79 INGREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        79 ~a~~~~------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~-~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +++...            .+..+++++++  +++++|++||.++|+.....+..+.. ...+...+ ..|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            987632            14678888876  78999999999998754332221111 01111222 5788899999889


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCC---
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK---  219 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~---  219 (287)
                      +++++++||++++++.....+              ...........+++.+|+|+++..++..+...+.++.+.+.+   
T Consensus       172 gi~~~iirpg~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTGNI--------------VMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCCceE--------------EECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            999999999999987421111              111111122357999999999999998876666788887632   


Q ss_pred             cccHHHHHHHHHH
Q 023078          220 YVTFDGLARACAK  232 (287)
Q Consensus       220 ~~s~~~i~~~i~~  232 (287)
                      ..++++++..+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            2688888877654

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=2.7e-22  Score=178.60  Aligned_cols=231  Identities=17%  Similarity=0.148  Sum_probs=157.4

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEecCCccc--cccC-----CCCCchhhhh---------hcCCcEEEEecCCCh
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPI--AQQL-----PGESDQEFAE---------FSSKILHLKGDRKDY   61 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~--~~~~-----~~~~~~~~~~---------~~~~~~~~~~d~~~~   61 (287)
                      ||||||||++|++.|++.+.   +|+++.|..+..  .+.+     .......+.+         ...++.++.+|++++
T Consensus       125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~  204 (605)
T PLN02503        125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES  204 (605)
T ss_pred             cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence            89999999999999998753   789999976531  1111     0000000100         024789999999986


Q ss_pred             ------HHHHhhhccCCccEEEEccCC-------------CccchHHHHHhCC---CCCcEEEEeeeeEeecCCC----C
Q 023078           62 ------DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----L  115 (287)
Q Consensus        62 ------~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~----~  115 (287)
                            +....+.+  ++|+|||+|+.             |+.++.+++++++   ..++|||+||.++||...+    .
T Consensus       205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~  282 (605)
T PLN02503        205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK  282 (605)
T ss_pred             ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeee
Confidence                  34555555  79999999986             3446788888875   5688999999999996531    1


Q ss_pred             CCCCC---------------------------------C----------------------CCCCCccc-cchHHHHHHH
Q 023078          116 PHCET---------------------------------D----------------------TVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus       116 ~~~e~---------------------------------~----------------------~~~p~~~~-~~k~~~E~~~  139 (287)
                      ++...                                 .                      ...| +.| .+|..+|.++
T Consensus       283 ~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~p-NtYt~TK~lAE~lV  361 (605)
T PLN02503        283 PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQ-DTYVFTKAMGEMVI  361 (605)
T ss_pred             ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCC-ChHHHHHHHHHHHH
Confidence            12100                                 0                      0011 335 8999999999


Q ss_pred             Hhc--CCcEEEEccCceec----------CCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC-C
Q 023078          140 ESK--GVNWTSLRPVYIYG----------PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E  206 (287)
Q Consensus       140 ~~~--~~~~~ilr~~~v~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~-~  206 (287)
                      ++.  +++++|+||+.|.+          ++.. ...+.+ .....|..-.++++++...|+|++|.++++++.++.. .
T Consensus       362 ~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~-~~~p~~-~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~  439 (605)
T PLN02503        362 NSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNR-MMDPIV-LYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHG  439 (605)
T ss_pred             HHhcCCCCEEEEcCCEecccccCCccccccCcc-ccchhh-hheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhh
Confidence            753  79999999999943          3211 111111 1222333333567889999999999999999888431 1


Q ss_pred             ---cCCCceEEeeCC--CcccHHHHHHHHHHHhCC
Q 023078          207 ---KASRQVFNISGE--KYVTFDGLARACAKAAGF  236 (287)
Q Consensus       207 ---~~~~~~~~~~~~--~~~s~~~i~~~i~~~~g~  236 (287)
                         ...+++||++++  +++++.++.+.+.+++..
T Consensus       440 ~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        440 GAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             cccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence               124689999988  889999999999987764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.89  E-value=2.3e-23  Score=168.09  Aligned_cols=212  Identities=23%  Similarity=0.347  Sum_probs=154.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||||.+|+++++.|++.+++|++++|+.++. .+.+.          ..+++++.+|+.|.+.+.++|+  ++|+||.+
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----------~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----------ALGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----------HTTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----------cccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            69999999999999999999999999998542 11121          3688999999999999999999  99999998


Q ss_pred             cCCC----ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc-cccchHHHHHHHHhcCCcEEEEccC
Q 023078           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        80 a~~~----~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~-~~~~k~~~E~~~~~~~~~~~ilr~~  152 (287)
                      .+..    .....++++|++  ++++||+.|-...+        .+.....|.. .+..|...|+++++.+++++++|+|
T Consensus        72 ~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~--------~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g  143 (233)
T PF05368_consen   72 TPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADY--------DESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPG  143 (233)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGT--------TTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-
T ss_pred             cCcchhhhhhhhhhHHHhhhccccceEEEEEecccc--------cccccccccchhhhhhhhhhhhhhhccccceecccc
Confidence            8854    345778899987  99999864432221        1112223333 3478899999999999999999999


Q ss_pred             ceecCCCCCchhHHHHH--HHHcCC-CcccCCCCCceeeee-eHHHHHHHHHHHhcCCcCC--CceEEeeCCCcccHHHH
Q 023078          153 YIYGPLNYNPVEEWFFH--RLKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGL  226 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i-~~~Dva~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~i  226 (287)
                      .++...     ...+..  ...... .+.++++++....++ +.+|+++++..++..+...  +..+.+++ +.+|+.|+
T Consensus       144 ~f~e~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  144 FFMENL-----LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             EEHHHH-----HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHH
T ss_pred             chhhhh-----hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHH
Confidence            876652     111111  111111 245556666666665 9999999999999886544  56777765 77999999


Q ss_pred             HHHHHHHhCCCC
Q 023078          227 ARACAKAAGFPE  238 (287)
Q Consensus       227 ~~~i~~~~g~~~  238 (287)
                      ++.+++.+|++.
T Consensus       218 a~~~s~~~G~~v  229 (233)
T PF05368_consen  218 AAILSKVLGKKV  229 (233)
T ss_dssp             HHHHHHHHTSEE
T ss_pred             HHHHHHHHCCcc
Confidence            999999999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.86  E-value=1.5e-21  Score=160.13  Aligned_cols=227  Identities=14%  Similarity=0.111  Sum_probs=146.3

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccc--cccCCC---CCchhhhhhcCCcEEEEecCCC------hHHHHhhh
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI--AQQLPG---ESDQEFAEFSSKILHLKGDRKD------YDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~   68 (287)
                      ||||||+|.+|+..|+.+- .+|++++|..+..  .+.+..   ....-.+....+++++.||+..      ...+..+.
T Consensus         6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La   85 (382)
T COG3320           6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA   85 (382)
T ss_pred             ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence            8999999999999999875 5999999987731  111110   0011112335789999999983      56777777


Q ss_pred             ccCCccEEEEccCC-------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCC----CC-----CC
Q 023078           69 SAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET----DT-----VD  124 (287)
Q Consensus        69 ~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~----~~-----~~  124 (287)
                      +  .+|.|||+++.             |+.++..+++.+.  +.|.|.|+||++|+........+++    .+     ..
T Consensus        86 ~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~  163 (382)
T COG3320          86 E--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQG  163 (382)
T ss_pred             h--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCc
Confidence            7  89999999875             6678999999876  6888999999999774332111111    11     12


Q ss_pred             CCccc-cchHHHHHHHHh---cCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH-
Q 023078          125 PKSRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD-  194 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~~---~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D-  194 (287)
                      +.+.| +|||++|.++++   .|++++|+|||.|.|+...     ..++..++....+-...+   +.....+.+.+++ 
T Consensus       164 ~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~~~p~~~v  240 (382)
T COG3320         164 LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLDMLPVDHV  240 (382)
T ss_pred             cCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---CcccchhhCcccee
Confidence            33445 999999999863   5899999999999998752     233334444444433322   2223333444333 


Q ss_pred             ----------HHHHHHHHhcCCcCCCceEE-eeCCCcccHHHHHHHHHH
Q 023078          195 ----------LARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK  232 (287)
Q Consensus       195 ----------va~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~i~~~i~~  232 (287)
                                +++++..+..++...-..|+ ..-|..+...++.+.+.+
T Consensus       241 ~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         241 ARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             eEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence                      33333333322221112333 333777999999999887

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.86  E-value=9.3e-21  Score=174.71  Aligned_cols=231  Identities=16%  Similarity=0.127  Sum_probs=158.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+||||++|++.|.++|++|...                             .+|++|.+.+...++..++|+|||+|
T Consensus       386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999887310                             12456777888888777899999999


Q ss_pred             CCC-------------------ccchHHHHHhCC--CCCcEEEEeeeeEeecC------CCCCCCCCCCCCCC-ccc-cc
Q 023078           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPK-SRH-KG  131 (287)
Q Consensus        81 ~~~-------------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~------~~~~~~e~~~~~p~-~~~-~~  131 (287)
                      +..                   ..++.+++++|+  ++ +++++||..+|+..      ...+++|++.+.|. +.| .+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            853                   224778899887  66 57888888898742      12467777666554 667 99


Q ss_pred             hHHHHHHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       132 k~~~E~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                      |.++|++++.+ .+..++|+.++||....+  ...++..+.+... +.++      .+..+++|++.+++.+++..  .+
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~--~~  584 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN--LR  584 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhC--CC
Confidence            99999999876 477888999999753211  1123344433332 3221      24677888998888888642  25


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMV  276 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  276 (287)
                      ++||++++..+|+.|+++.+.+.++... .+..++....  ......+.... .+|++|+++.+|.
T Consensus       585 giyni~~~~~~s~~e~a~~i~~~~~~~~-~~~~~~~~~~--~~~~~a~rp~~-~l~~~k~~~~~~~  646 (668)
T PLN02260        585 GIWNFTNPGVVSHNEILEMYKDYIDPGF-KWSNFTLEEQ--AKVIVAPRSNN-EMDASKLKKEFPE  646 (668)
T ss_pred             ceEEecCCCcCcHHHHHHHHHHhcCCcc-cccccCHHHh--hhHhhCCCccc-cccHHHHHHhCcc
Confidence            7999999999999999999999885211 1222222211  10011111111 6899999988777

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.85  E-value=3.9e-20  Score=183.61  Aligned_cols=232  Identities=18%  Similarity=0.194  Sum_probs=159.3

Q ss_pred             CCcccchHHHHHHHHHHCC----CeEEEEecCCccccc--cCCCCCc---hhhhhhcCCcEEEEecCCC------hHHHH
Q 023078            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQ--QLPGESD---QEFAEFSSKILHLKGDRKD------YDFVK   65 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~d~~~------~~~~~   65 (287)
                      ||||||+|+++++.|++++    ++|+++.|+......  .+.....   ........+++++.+|+.+      .+.+.
T Consensus       977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~ 1056 (1389)
T TIGR03443       977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWS 1056 (1389)
T ss_pred             eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHH
Confidence            7999999999999999876    899999997644211  0000000   0000112478899999974      45666


Q ss_pred             hhhccCCccEEEEccCC-------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCC------------CCCC
Q 023078           66 SSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHC  118 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~------------~~~~  118 (287)
                      .+..  ++|+|||+|+.             |+.++.+++++++  ++++|+|+||.++|+....            ..+.
T Consensus      1057 ~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~ 1134 (1389)
T TIGR03443      1057 DLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIP 1134 (1389)
T ss_pred             HHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCC
Confidence            6666  89999999875             3456788888876  7789999999999964211            1122


Q ss_pred             CCCC-----CCCCccc-cchHHHHHHHHh---cCCcEEEEccCceecCCCCCc-----hhHHHHHHHHcCCCcccCCCCC
Q 023078          119 ETDT-----VDPKSRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGI  184 (287)
Q Consensus       119 e~~~-----~~p~~~~-~~k~~~E~~~~~---~~~~~~ilr~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  184 (287)
                      |+..     ..+.+.| .+|+.+|.++..   .+++++++||+.+||+...+.     ++..+++....   +...++..
T Consensus      1135 e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~---~~~~p~~~ 1211 (1389)
T TIGR03443      1135 ESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ---LGLIPNIN 1211 (1389)
T ss_pred             cccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH---hCCcCCCC
Confidence            3221     1122346 999999998853   589999999999999864322     22222322222   22223445


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          185 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       185 ~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      ..++|++++|++++++.++.++.  ..+.+||+.++..+++.++++.+.+. |.+.
T Consensus      1212 ~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443      1212 NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred             CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence            57899999999999999987653  23468999998889999999999764 6554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.82  E-value=8.9e-20  Score=159.84  Aligned_cols=214  Identities=16%  Similarity=0.134  Sum_probs=143.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh----hhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF----AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      |||+|+||+++++.|+++|++|++++|+..+............+    .....+++++.+|+.+.+++.+++.  ++|+|
T Consensus        86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV  163 (576)
T PLN03209         86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV  163 (576)
T ss_pred             ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            79999999999999999999999999987663221110000000    0001357899999999999999998  89999


Q ss_pred             EEccCCCc--------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        77 i~~a~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      ||++|...              .++.+++++++  +++|||++||.+++....    ... .......| ..|..+|..+
T Consensus       164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~~-~~~sk~~~~~~KraaE~~L  238 (576)
T PLN03209        164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PAA-ILNLFWGVLCWKRKAEEAL  238 (576)
T ss_pred             EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----ccc-chhhHHHHHHHHHHHHHHH
Confidence            99987532              35677888876  789999999987631110    010 11122223 7788899999


Q ss_pred             HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc-CCCceEEeeCC
Q 023078          140 ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       140 ~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~~~~~~~  218 (287)
                      .+.|++|++||||+++++.+....         .+. +............+..+|||++++.++.++. ..+.+|.+.++
T Consensus       239 ~~sGIrvTIVRPG~L~tp~d~~~~---------t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~  308 (576)
T PLN03209        239 IASGLPYTIVRPGGMERPTDAYKE---------THN-LTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE  308 (576)
T ss_pred             HHcCCCEEEEECCeecCCcccccc---------ccc-eeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence            999999999999999887432110         011 1111111111235889999999999998654 56789999887


Q ss_pred             CcccHHHHHHHHH
Q 023078          219 KYVTFDGLARACA  231 (287)
Q Consensus       219 ~~~s~~~i~~~i~  231 (287)
                      .......+.+.+.
T Consensus       309 ~~~p~~~~~~~~~  321 (576)
T PLN03209        309 TTAPLTPMEELLA  321 (576)
T ss_pred             CCCCCCCHHHHHH
Confidence            6443344444443

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=2.4e-17  Score=136.23  Aligned_cols=206  Identities=24%  Similarity=0.276  Sum_probs=158.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|+++++.|+++|++|++++|++.......            .++++..+|+.+...+...++  +.|.++++.
T Consensus         6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~   71 (275)
T COG0702           6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS   71 (275)
T ss_pred             EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence            799999999999999999999999999988743221            578999999999999999999  999999887


Q ss_pred             CCCc-------cc---hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEE
Q 023078           81 GREA-------DE---VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        81 ~~~~-------~~---~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      +...       ..   ..+..+++. +.++++++|...+.            ...+..+..+|..+|+.+.+.+++++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD------------AASPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCC------------CCCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            7331       11   233334444 67888888876541            1222333499999999999999999999


Q ss_pred             ccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHH
Q 023078          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (287)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~  229 (287)
                      |++.+|.......    .......+.++....  ...++++..+|++.++...+..+...+++|.+++++..+..++.+.
T Consensus       140 r~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~  213 (275)
T COG0702         140 RRAAFYLGAGAAF----IEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASG  213 (275)
T ss_pred             ecCeeeeccchhH----HHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHH
Confidence            9877776632111    222333443333222  3378999999999999999988767788999999988999999999


Q ss_pred             HHHHhCCCC
Q 023078          230 CAKAAGFPE  238 (287)
Q Consensus       230 i~~~~g~~~  238 (287)
                      +.+..|++.
T Consensus       214 l~~~~gr~~  222 (275)
T COG0702         214 LDYTIGRPV  222 (275)
T ss_pred             HHHHhCCcc
Confidence            999999886

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-18  Score=144.29  Aligned_cols=205  Identities=15%  Similarity=0.156  Sum_probs=140.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.........        ....++.++.+|++|.+++.++++.     .++|+
T Consensus         8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA--------RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110        1124688999999999888777652     25899


Q ss_pred             EEEccCCC--------------------ccchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|..                    ..++.++++++    +  +..++|++||......           ..+.+.|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  148 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGFSLY  148 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCCchh
Confidence            99999863                    22344455553    3  5679999999754211           1123456


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCce---ecCCCCC--------c-hhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPLNYN--------P-VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v---~g~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                       .+|...|.+++       .++++++++|||.+   ||++...        . ....+.+.+.. ....         -+
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~  218 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFA---------IP  218 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCC---------CC
Confidence             99999887663       25899999999988   5543211        0 01112222222 1111         13


Q ss_pred             eeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhC
Q 023078          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g  235 (287)
                      .+++|++++++.++..+. .+..||+++++..+.+++++.+.+.++
T Consensus       219 ~d~~~~~~a~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        219 GDPQKMVQAMIASADQTP-APRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             CCHHHHHHHHHHHHcCCC-CCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            568999999999998654 345799999988888888887777665

>PRK09135 pteridine reductase; Provisional

Probab=99.75  E-value=3.5e-17  Score=133.28  Aligned_cols=198  Identities=20%  Similarity=0.210  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+.. ....+.++.+|+++.+++.++++.     ..+|
T Consensus        12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135         12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987543211111    01111 123578899999999988887763     2589


Q ss_pred             EEEEccCCC--------------------ccchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +|||+++..                    ..++.++++++.     ....++.+++..           +..+..|...|
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Y  156 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPLKGYPVY  156 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCCCCchhH
Confidence            999999852                    223455666653     223444444321           12233455567


Q ss_pred             -cchHHHHHHHHh------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 -~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                       .+|..+|.+++.      .+++++.+||+.++||.....+..........+.+..         .+.+++|+++++..+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~  227 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLK---------RIGTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcC---------CCcCHHHHHHHHHHH
Confidence             999999987742      2689999999999999753323222222333332221         122479999999666


Q ss_pred             hcC-CcCCCceEEeeCCCccc
Q 023078          203 LGN-EKASRQVFNISGEKYVT  222 (287)
Q Consensus       203 ~~~-~~~~~~~~~~~~~~~~s  222 (287)
                      +.. ....|++|++.++..++
T Consensus       228 ~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCccccccCcEEEECCCeecc
Confidence            654 23468899999987654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.75  E-value=2.2e-17  Score=135.60  Aligned_cols=202  Identities=16%  Similarity=0.117  Sum_probs=133.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+++...+..     ..+.....++.++++|+++.+.+.++++.     ..+|+
T Consensus        13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394         13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVA-----DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-----HHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875422111     11112234577899999999988877663     14899


Q ss_pred             EEEccCCCc--------------------cc----hHHHHHhC-C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DE----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~l~~a~-~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+++...                    .+    +.++++++ +  +.+++|++||...+..           ..+...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  156 (262)
T PRK13394         88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----------SPLKSA  156 (262)
T ss_pred             EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----------CCCCcc
Confidence            999998631                    11    44556666 4  6789999999754321           112234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcC--C-CcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--R-PIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       ..+++++++||+.++++.....+ ..........  . ...++.......+|++++|+++
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQI-PEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhh-HhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            5 88888776653       25799999999999998522111 1100000000  0 0011122334578999999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++.++....  ..|+.|++.++.
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCce
Confidence            9999987643  247889888764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=3e-17  Score=133.60  Aligned_cols=196  Identities=18%  Similarity=0.208  Sum_probs=132.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||||++|++|++.|+++|++|+++.|+.....+.+.    ........++.++.+|+.+.+.+.++++..     ++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888887654222111    111112356889999999999888877532     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    +..++++++    +  +.+++|++||...+.+.           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----------~~~~~y  156 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----------PGRSNY  156 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------CCchHH
Confidence            9999985211                    122334443    3  67899999998765321           112235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++||+.++++.............   ....       ....+++.+|+++++..
T Consensus       157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~dva~~~~~  226 (249)
T PRK12825        157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK---DAET-------PLGRSGTPEDIARAVAF  226 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh---hccC-------CCCCCcCHHHHHHHHHH
Confidence             78887776552       358999999999999986432222111111   0011       12238999999999999


Q ss_pred             HhcCC--cCCCceEEeeCCCcc
Q 023078          202 VLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      ++...  ...|+.|+++++..+
T Consensus       227 ~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        227 LCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HhCccccCcCCCEEEeCCCEee
Confidence            99764  336899999987653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.74  E-value=3.7e-17  Score=133.92  Aligned_cols=197  Identities=17%  Similarity=0.218  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|++.+.....     ..+.....++.++.+|+.+.+++.++++..     .+|+
T Consensus        10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429         10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111     111222357888999999999888877632     6899


Q ss_pred             EEEccCCCc--------------------cc----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++...                    .+    +..++.+++  +.++||++||...+.+.           .+.+.|
T Consensus        85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y  153 (258)
T PRK12429         85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS-----------AGKAAY  153 (258)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------CCcchh
Confidence            999998521                    12    333445544  67899999998654221           122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc--CCCc-----ccCCCCCceeeeeeHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPI-----PIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~i~~~D  194 (287)
                       .+|...+.+.+       ..+++++++|||.+++|.....     +.....  +...     ..+........+++++|
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence             77777775542       3579999999999998842111     111110  0000     01112223457999999


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +|+++..++....  ..++.|++.++
T Consensus       229 ~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        229 IADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             HHHHHHHHcCccccCccCCeEEeCCC
Confidence            9999998887533  24788888876

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.74  E-value=4.7e-17  Score=132.72  Aligned_cols=195  Identities=17%  Similarity=0.152  Sum_probs=130.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|.++++.|+++|++|++++|+..+.....     ..+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826         12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-----ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421111     111122345888999999999888887632     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +..++++++    .  +.++||++||...++.          ...+...|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~~~y  156 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGLAHY  156 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCccHH
Confidence            9999876321                    123344443    2  5678999999865411          11122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|..++.+++       ..+++++++||+.++|+.........+...+....++         ..+++++|+|+++..
T Consensus       157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  227 (251)
T PRK12826        157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88888777653       3589999999999999853221111111222222111         157899999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|++|++.++.
T Consensus       228 l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HhCccccCcCCcEEEECCCc
Confidence            886543  258899998765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.74  E-value=4.9e-17  Score=132.96  Aligned_cols=198  Identities=18%  Similarity=0.217  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+...... +.    ..+.....++.++.+|+.+.+++.++++.     .++|+
T Consensus         7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEA-AA----KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221 11    01111134688899999999866655542     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +...++++    ++  +++++|++||...+....           ....|
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~~~y  150 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----------FKSAY  150 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----------CCchh
Confidence            9999986321                    12223333    33  678999999976543211           11235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcc-------cCCCCCceeeeeeHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKD  194 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D  194 (287)
                       .+|...+.+.+       ..+++++++||+.++++....     .+..........       .........++++++|
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK-----QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH-----HHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence             78877776653       248999999999999884211     111111111100       0112335568999999


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +|++++.+++..  ...++.|++.++.
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcCcc
Confidence            999999999764  2257889998764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.73  E-value=2.2e-17  Score=125.41  Aligned_cols=208  Identities=18%  Similarity=0.120  Sum_probs=148.3

Q ss_pred             CcccchHHHHHH-----HHHHCC----CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCC
Q 023078            2 GGTRFIGVFLSR-----LLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         2 GatG~iG~~l~~-----~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   72 (287)
                      +++|+++..|..     ++-+.+    |+|++++|++.+.                 ++.+.+.|..-.-      -  .
T Consensus        19 ~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------------ritw~el~~~Gip------~--s   73 (315)
T KOG3019|consen   19 WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------------RITWPELDFPGIP------I--S   73 (315)
T ss_pred             ccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------------ccccchhcCCCCc------e--e
Confidence            578888888876     444433    8999999998763                 3333333332110      0  3


Q ss_pred             ccEEEEccCCC--------------------ccchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           73 FDVVYDINGRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        73 ~d~vi~~a~~~--------------------~~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +++.++.++.|                    +..+..+.+++.    ..+.+|.+|..++|-......++|+......++
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~  153 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI  153 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence            44444444432                    234666777765    456899999999998777667777776665555


Q ss_pred             c---cchHHHHHHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          129 H---KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       129 ~---~~k~~~E~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      .   +.+|+..........+.+++|.|.|.|.+....-..++.-++-.|+++   |++.+.++|||++|++..+..++++
T Consensus       154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~  230 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALEN  230 (315)
T ss_pred             HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhc
Confidence            3   345655555555668999999999999864322222333455667776   8999999999999999999999999


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      +.- .++.|-..+++.+..|+++.+.++++++.
T Consensus       231 ~~v-~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  231 PSV-KGVINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             CCC-CceecccCCCccchHHHHHHHHHHhCCCc
Confidence            764 45999999999999999999999999774

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.3e-16  Score=130.03  Aligned_cols=201  Identities=18%  Similarity=0.227  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+.....++.++.+|+++++++.++++.     .++|+
T Consensus        12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVV----AEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            7999999999999999999999999997543111110    11111234678899999999988777653     26899


Q ss_pred             EEEccCCC--------------ccchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-cchHHH
Q 023078           76 VYDINGRE--------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNT  135 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-~~k~~~  135 (287)
                      |||+++..              ..+..++++++.    ...++|++||........       ....| ...| .+|...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~~~~~~~Y~~sK~a~  160 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKTMPEYEPVARSKRAG  160 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccCCccccHHHHHHHHH
Confidence            99998752              223555666643    335899999864321100       01112 2345 899999


Q ss_pred             HHHHHh-------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          136 ESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       136 E~~~~~-------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      |.+++.       .++++++++|+.+-++..     ..+..   ...+-...........+++++|+|+++..+++....
T Consensus       161 e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  232 (248)
T PRK07806        161 EDALRALRPELAEKGIGFVVVSGDMIEGTVT-----ATLLN---RLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVP  232 (248)
T ss_pred             HHHHHHHHHHhhccCeEEEEeCCccccCchh-----hhhhc---cCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcccc
Confidence            987742       578999999887766521     11110   000000000001123689999999999999997666


Q ss_pred             CCceEEeeCCCc
Q 023078          209 SRQVFNISGEKY  220 (287)
Q Consensus       209 ~~~~~~~~~~~~  220 (287)
                      .+++|++++++.
T Consensus       233 ~g~~~~i~~~~~  244 (248)
T PRK07806        233 SGHIEYVGGADY  244 (248)
T ss_pred             CccEEEecCccc
Confidence            789999998874

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.1e-16  Score=127.85  Aligned_cols=193  Identities=18%  Similarity=0.213  Sum_probs=130.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.....++.++.+|+++.+++.++++..     .+|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774         12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     111111245778899999998877766532     5899


Q ss_pred             EEEccCCCc-----------------------cchHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREA-----------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~-----------------------~~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      |||++|...                       .+..++++++.      +.+++|++||...|.              +.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------~~  152 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------------YS  152 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------------Cc
Confidence            999998631                       12233333322      456999999987753              22


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      +.| .+|.+.|.+.+       ..++++++++||.+..+.........+.+...++.+..         -+.+++|++++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~  223 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLS---------RMGTPEDLVGM  223 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence            346 89998887763       24789999999988877533222222333333332221         13568999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCcc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++.++....  ..+++|++.++..+
T Consensus       224 ~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        224 CLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHhChhhhCcCCCEEEECCCeec
Confidence            999887642  36789999987654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.70  E-value=5.8e-16  Score=114.17  Aligned_cols=189  Identities=21%  Similarity=0.307  Sum_probs=136.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||||.+|++|++.+.++||+|++++|++++...             ..++.+.+.|+.|.+.+.+.+.  +.|+||..-
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-------------~~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~   70 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-------------RQGVTILQKDIFDLTSLASDLA--GHDAVISAF   70 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-------------cccceeecccccChhhhHhhhc--CCceEEEec
Confidence            5999999999999999999999999999887321             1578889999999999999998  999999765


Q ss_pred             CCCcc--------chHHHHHhCC--CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCccc-cchHHHHH--HH-HhcCCc
Q 023078           81 GREAD--------EVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KGKLNTES--VL-ESKGVN  145 (287)
Q Consensus        81 ~~~~~--------~~~~l~~a~~--~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~--~~-~~~~~~  145 (287)
                      +....        ....+++.++  ++.|++.+++++- |-...  ..-.+.+..|..|+ ..+..+|.  .+ .+.+++
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g--~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~  148 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG--TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLD  148 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC--ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcc
Confidence            54321        2344667766  8899999888773 22222  12233455566666 66666663  33 355799


Q ss_pred             EEEEccCceecCCCCCchhHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEee
Q 023078          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (287)
Q Consensus       146 ~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~  216 (287)
                      ||.+-|+.+|-|++...-       ..-++ .+....   .--++|+..|.|-+++..++++...++.|.+.
T Consensus       149 WTfvSPaa~f~PGerTg~-------yrlggD~ll~n~---~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         149 WTFVSPAAFFEPGERTGN-------YRLGGDQLLVNA---KGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             eEEeCcHHhcCCccccCc-------eEeccceEEEcC---CCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            999999999999754321       11222 222211   22489999999999999999988777777664

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.7e-17  Score=133.67  Aligned_cols=210  Identities=18%  Similarity=0.159  Sum_probs=138.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+......        ......+.++++|++|.+++.++++.     ..+|+
T Consensus         9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLA--------EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111        01124577889999999888777653     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    ++..++++    ++  +.+++|++||...+.+..           ....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y  149 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------MSGIY  149 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------CccHH
Confidence            9999986321                    12223333    33  567999999987653221           12335


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCceeee-eeHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQL-GHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~Dv  195 (287)
                       .+|...+.+.+       ..|++++++|||.+..+......     ... ...+...  +   ........+ ++++|+
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~--~---~~~~~~~~~~~~p~dv  223 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA-YDTLREE--L---AEQWSERSVDGDPEAA  223 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh-hhhHHHH--H---HHHHHhccCCCCHHHH
Confidence             88988776652       36899999999988776421100     000 0011000  0   000011234 789999


Q ss_pred             HHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhC
Q 023078          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g  235 (287)
                      +++++.+++.+...+..++..++..+++.++.+.+.+.-+
T Consensus       224 a~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (275)
T PRK08263        224 AEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE  263 (275)
T ss_pred             HHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence            9999999998765555555555567899999998887543

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.5e-16  Score=127.84  Aligned_cols=210  Identities=20%  Similarity=0.205  Sum_probs=137.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+..+......     .+...  ..++.++.+|+.+++++.++++..     .+
T Consensus        13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875         13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAE-----EIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998654221110     11110  246788899999998888777632     68


Q ss_pred             cEEEEccCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      |++||+++...                     .+...+++++    .  +..+++++||...+...           .+.
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~  156 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-----------RWF  156 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------CCC
Confidence            99999998421                     0122233332    1  34589999998764221           123


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      +.| .+|...|.+++       ..+++++.+||+.+.++....... ...........         ....+++++|+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~  227 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT---------PLPRVGEVEDVAN  227 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC---------CCCCCcCHHHHHH
Confidence            446 99999998874       247899999999887763211000 01111111111         1123567999999


Q ss_pred             HHHHHhcCCcC--CCceEEeeCCCcc----cHHHHHHHHHHHhC
Q 023078          198 AFVQVLGNEKA--SRQVFNISGEKYV----TFDGLARACAKAAG  235 (287)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~~~~~~~~----s~~~i~~~i~~~~g  235 (287)
                      ++..++..+..  .++++++.++..+    +..|+++.+.+..|
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence            99999987543  4789999988776    66677666655444

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.1e-16  Score=125.62  Aligned_cols=204  Identities=14%  Similarity=0.113  Sum_probs=138.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+......     .+  ...+++++.+|+.|.+++..++...     ++|+
T Consensus         8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD-----AL--GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655221110     00  1246788999999999888777632     5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    +...+++++    .  +..++|++||...+...            ....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~y  148 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------------GHPAY  148 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------------CCccc
Confidence            9999986321                    122233332    2  55789999986432110            01135


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc--hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                       .+|...+.+.+       ..+++++.++||.++++.....  ....+......         .....++++++|+++++
T Consensus       149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAV  219 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHH
Confidence             88888887663       2479999999999988742110  01111111111         11235789999999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCCcccHHHHHHHHHH
Q 023078          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~~s~~~i~~~i~~  232 (287)
                      +.++...  ...|..+++.++...+.+||.+.+.+
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999653  23578899999988889999988754

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.5e-16  Score=128.09  Aligned_cols=192  Identities=18%  Similarity=0.158  Sum_probs=125.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ........++.++.+|+++.+++.++++..     .+|+
T Consensus        16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEELV-----DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999998765421110     111111246788899999999888877632     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    ++.++++++    .  +..+||++||...+...           .+...|
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  159 (274)
T PRK07775         91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----------PHMGAY  159 (274)
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----------CCcchH
Confidence            9999986321                    122233332    2  45679999998765321           112346


Q ss_pred             -cchHHHHHHHHh-------cCCcEEEEccCceecCCCCC---chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          130 -KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~~-------~~~~~~ilr~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                       .+|...|.+.+.       .+++++++|||.+.++....   .....+.......      + ......+++++|+|++
T Consensus       160 ~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~dva~a  232 (274)
T PRK07775        160 GAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDYFLRASDLARA  232 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccccccCHHHHHHH
Confidence             899999887642       38999999999876552111   1111111111110      1 1223568999999999


Q ss_pred             HHHHhcCCcCCCceEEee
Q 023078          199 FVQVLGNEKASRQVFNIS  216 (287)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~  216 (287)
                      ++.+++++. .+.+||+.
T Consensus       233 ~~~~~~~~~-~~~~~~~~  249 (274)
T PRK07775        233 ITFVAETPR-GAHVVNME  249 (274)
T ss_pred             HHHHhcCCC-CCCeeEEe
Confidence            999998754 45677775

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.68  E-value=1.3e-15  Score=116.74  Aligned_cols=257  Identities=16%  Similarity=0.099  Sum_probs=176.9

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||+-|.+|..++..|..+ |.+-++++.-.+.....+            ..-.++..|+.|...+.++.-...+|..||+
T Consensus        50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             ecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------------ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence            799999999999998876 755444432212212222            2234677888888888888887799999998


Q ss_pred             cCC---------------CccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCC-CCCCCCCCCCccc-cchHHHHHHH--
Q 023078           80 NGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLP-HCETDTVDPKSRH-KGKLNTESVL--  139 (287)
Q Consensus        80 a~~---------------~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~-~~e~~~~~p~~~~-~~k~~~E~~~--  139 (287)
                      .+.               |+.+..|+++.++ ..-++...|++++||...... ...-....|...| .||..+|-+=  
T Consensus       118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy  197 (366)
T KOG2774|consen  118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY  197 (366)
T ss_pred             HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence            542               6778999999987 444666789999999866533 3333445778888 9999988654  


Q ss_pred             --HhcCCcEEEEccCceecCCC----CCchhHH-HHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC--CC
Q 023078          140 --ESKGVNWTSLRPVYIYGPLN----YNPVEEW-FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--SR  210 (287)
Q Consensus       140 --~~~~~~~~ilr~~~v~g~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~--~~  210 (287)
                        ...|+.+-.+|.+.++....    ...+... +....++|+ ...+..++...+++|.+|+.++++.++..+..  ..
T Consensus       198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk-~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkr  276 (366)
T KOG2774|consen  198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGK-HTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKR  276 (366)
T ss_pred             HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCC-cccccCCCccCceeehHHHHHHHHHHHhCCHHHhhh
Confidence              35789999999998887531    2222223 334444544 45566788999999999999999998876532  46


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhccccc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRS  279 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  279 (287)
                      .+||+++ ..+|-.|+++.+.++...-  .+...+..  +......||.    .+|.+.++++..|+-+
T Consensus       277 r~ynvt~-~sftpee~~~~~~~~~p~~--~i~y~~~s--rq~iad~wp~----~~dds~ar~~wh~~h~  336 (366)
T KOG2774|consen  277 RTYNVTG-FSFTPEEIADAIRRVMPGF--EIDYDICT--RQSIADSWPM----SLDDSEARTEWHEKHS  336 (366)
T ss_pred             heeeece-eccCHHHHHHHHHhhCCCc--eeecccch--hhhhhhhccc----ccCchhHhhHHHHhhh
Confidence            7999985 6799999999998877532  11111111  1222334444    5688888888877643

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.67  E-value=6.7e-16  Score=126.42  Aligned_cols=201  Identities=17%  Similarity=0.222  Sum_probs=131.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.....+...        ....++.++.+|++|.+++.++++..     .+|+
T Consensus        12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067         12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL--------EIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765322110        11245788999999998888877632     6899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC-------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~-------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+++...                    .+..++++++.       ...++|++||.....+           ..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~  152 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG-----------EALVSH  152 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-----------CCCCch
Confidence            999988521                    12344444432       1257999999643110           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc---CCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       ..+++++.++||.++++.... .. ..+.....   +......+.......+.+++|+|+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-VD-ALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-hh-hhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            6 89988777653       368999999999999874211 00 00000000   000011122233457899999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ++..++....  ..|++|++.++..+|
T Consensus       231 ~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        231 MALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHhCcccccccCcEEeecCCEeCC
Confidence            9999987643  267899998886543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.67  E-value=1.5e-15  Score=123.30  Aligned_cols=193  Identities=17%  Similarity=0.197  Sum_probs=128.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|++.+.....     ........++.++.+|+.|++++.++++.     ..+|.
T Consensus        11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653         11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865522111     11112235688889999999888777763     25799


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +..++++++    +  +.+++|++||.....+           ..+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----------~~~~~~y  154 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----------NPGQTNY  154 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----------CCCCcHh
Confidence            9999976321                    123334443    2  6689999998754211           1122335


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++||+.++++.... +............         ....+++++|+++++..
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~  224 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKEI---------PLGRLGQPEEVANAVAF  224 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence             77877666542       358999999999999985321 1111111111111         12457889999999999


Q ss_pred             HhcCC--cCCCceEEeeCCC
Q 023078          202 VLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++...  ...++.|++++|.
T Consensus       225 ~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        225 LASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HcCchhcCccCCEEEeCCCe
Confidence            98753  2257899998875

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.1e-16  Score=124.12  Aligned_cols=184  Identities=17%  Similarity=0.216  Sum_probs=126.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+...     .+.  ..+++++.+|+.|.+++.++++..     ++|+
T Consensus        13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828         13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-----GVP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-----HHh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            7999999999999999999999999998655322111     011  235778899999988887777632     6899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++...                    .+..++++++    +  +.+++|++||...++..           .+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y  154 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGMGAY  154 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCcchh
Confidence            999987531                    1233344443    2  67899999998865432           122335


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+++       ..+++++.+|||.++++.....            .+      ......+++++|+|+++..
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------~~------~~~~~~~~~~~dva~~~~~  216 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------MP------DADFSRWVTPEQIAAVIAF  216 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------CC------chhhhcCCCHHHHHHHHHH
Confidence             77877666552       3589999999999998731100            00      0112347999999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++.+..  ..|+.+++.++..
T Consensus       217 ~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        217 LLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HhCcccccccceEEEecCCEe
Confidence            998643  2578888887653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.66  E-value=4.8e-15  Score=121.59  Aligned_cols=191  Identities=15%  Similarity=0.185  Sum_probs=125.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++.. .+ +    ...+......+.++.+|+++.+++.++++.     ..+|+
T Consensus        14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         14 TGAAQGIGRGVALRAAAEGARVVLVDRSELV-HE-V----AAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HH-H----HHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            7999999999999999999999999997432 11 1    011111234577889999998877776653     26899


Q ss_pred             EEEccCCCc--c-----------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--D-----------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--~-----------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|...  .                       .++.++..++  +..++|++||...++.             +...
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------~~~~  154 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------NRVP  154 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------CCCc
Confidence            999997421  0                       0123444443  5568999999876531             1123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC------------CchhHHHHHHHHcCCCcccCCCCCceee
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      | .+|.+.+.+.+       ..+++++.++||.+++|...            ......+........++         .-
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  225 (260)
T PRK12823        155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM---------KR  225 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc---------cc
Confidence            5 89999887763       24899999999999997310            00111122222222222         12


Q ss_pred             eeeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          189 LGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +.+++|+|+++..++....  ..++.+++.+++
T Consensus       226 ~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        226 YGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            3468999999999886542  367889987764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=2.8e-15  Score=122.29  Aligned_cols=197  Identities=14%  Similarity=0.057  Sum_probs=126.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||++++++|+++|++|++..|+........    .........++.++.+|+++++++..+++.     ..+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNET----LKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999988776543211100    001111124567889999998887776653     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      |||++|....                    +...++++    ++...+||++||...+..           ..+.+.| .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  156 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----------AYGLSIYGA  156 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----------CCCchHHHH
Confidence            9999986211                    12222333    233468999999876532           1233456 8


Q ss_pred             chHHHHHHHH----h--cCCcEEEEccCceecCCCCCc--hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          131 GKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      +|...|.+.+    +  .++.+..++||.+.++.....  ...........        .......+++++|+|+++..+
T Consensus       157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--------KFTLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--------hcCcCCCCCCHHHHHHHHHHH
Confidence            8988887763    2  278999999999877631100  00000001110        001123689999999999999


Q ss_pred             hcCCcCCCceEEeeCCCc
Q 023078          203 LGNEKASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~  220 (287)
                      ++.....+++|++.++..
T Consensus       229 ~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        229 LKIESITGQVFVLDSGES  246 (252)
T ss_pred             hCccccCCCeEEecCCee
Confidence            986655688999998864

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=123.72  Aligned_cols=194  Identities=19%  Similarity=0.244  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------   70 (287)
                      |||+|+||+++++.|+++|++|.++ .|+..+.....     ..+......++++.+|++|.+++.++++.         
T Consensus        12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746         12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-----REIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            7999999999999999999999876 46543321111     01111124678899999999988887763         


Q ss_pred             --CCccEEEEccCCCcc--------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           71 --KGFDVVYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                        .++|++||++|....                    +..++++++    +...++|++||..++...           .
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~  155 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF-----------T  155 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----------C
Confidence              258999999986321                    122233332    234589999998765321           1


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      +...| .+|...+.+.+       ..++++++++||.++++..................        .....+++++|++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva  227 (254)
T PRK12746        156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS--------SVFGRIGQVEDIA  227 (254)
T ss_pred             CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc--------CCcCCCCCHHHHH
Confidence            22345 88998887652       35799999999999887421110000011111111        1123567899999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +++..++....  ..|++|++.++
T Consensus       228 ~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        228 DAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHcCcccCCcCCCEEEeCCC
Confidence            99988887543  25789999866

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=4.7e-15  Score=121.34  Aligned_cols=197  Identities=18%  Similarity=0.254  Sum_probs=128.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.........    ..+.....++.++.+|+++++++.++++..     .+|+
T Consensus         8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQ----QELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987543111110    111111346889999999998877766532     6899


Q ss_pred             EEEccCCCc----------------------cchHHHHHhC----C---C-----CCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           76 VYDINGREA----------------------DEVEPILDAL----P---N-----LEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~~~l~~a~----~---~-----~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                      |||++|...                      .+..++++++    +   +     ..++|++||...+.+.         
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  154 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---------  154 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---------
Confidence            999998521                      1122333332    1   1     4679999997653211         


Q ss_pred             CCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                        .+.+.| .+|.+.|.+++       ..++++++++||.+.++.... ....+.+....+ ..       ....+.+++
T Consensus       155 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~-~~-------~~~~~~~~~  223 (256)
T PRK12745        155 --PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAKG-LV-------PMPRWGEPE  223 (256)
T ss_pred             --CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhhc-CC-------CcCCCcCHH
Confidence              122345 88999887653       368999999999998874321 111222221111 11       123467999


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      |+++++..++....  ..|..|++.++...
T Consensus       224 d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        224 DVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            99999998886532  35789999887543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.65  E-value=8.6e-16  Score=125.91  Aligned_cols=203  Identities=14%  Similarity=0.099  Sum_probs=129.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+...  ..++.++.+|+++.+++.++++.     ..+
T Consensus         8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA-----QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999765422111     011111  13588999999998888777653     268


Q ss_pred             cEEEEccCCCc--------------------cchH----HHHHhCC--C-CCcEEEEeeeeE-eecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREA--------------------DEVE----PILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~----~l~~a~~--~-~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p  125 (287)
                      |+|||++|...                    .++.    .+++.+.  + ..++|++||... ++.            ..
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------~~  150 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------KH  150 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------CC
Confidence            99999998521                    1222    2333332  3 358999988642 221            11


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc--CCCcccCCCCCceeeeeeHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ...| .+|.+.+.+.+       ..+++++.+|||.++++......++.+......  ......+.+......+++++|+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  230 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDV  230 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHH
Confidence            2235 88988766542       468999999999988764332222222211100  0000111122334568899999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++++..++.+..  ..|+.|++.++..
T Consensus       231 ~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        231 LNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHHHHcCcccccccCceEEEcCCEE
Confidence            999998887543  2578899988763

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.2e-15  Score=124.92  Aligned_cols=201  Identities=14%  Similarity=0.129  Sum_probs=127.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|+++........   ........+++++.+|++|++++.+ ++.     ..+|+
T Consensus         9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~   84 (280)
T PRK06914          9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ---ATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL   84 (280)
T ss_pred             ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH---HHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence            79999999999999999999999999986542211100   0000012468889999999888765 432     25799


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    +..+++++    ++  +..++|++||...+.+           ..+...|
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  153 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-----------FPGLSPY  153 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-----------CCCCchh
Confidence            9999986321                    22233333    43  5678999998654211           1122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch------------hHHHHHHHHcCCCcccCCCCCceeee
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------------EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                       .+|...+.+.+       ..+++++++|||.+.++......            .......+...  +     ......+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~  226 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I-----NSGSDTF  226 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H-----hhhhhcc
Confidence             88888887653       35899999999999887311000            00001111100  0     0112457


Q ss_pred             eeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHH
Q 023078          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~  224 (287)
                      ++++|+|++++.+++++... ..|+++++..+++.
T Consensus       227 ~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~  260 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL  260 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence            88999999999999987643 57888876655443

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.1e-15  Score=123.87  Aligned_cols=193  Identities=16%  Similarity=0.133  Sum_probs=122.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++.+......        ....++..+.+|++|.+++.++++..     .+|+
T Consensus        10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180         10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh--------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765321111        01246788899999998888777631     5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    ++.+++++    ++  +..++|++||...+...           .+...|
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~~~Y  150 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGIGYY  150 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCcchh
Confidence            9999987321                    23344444    22  45689999997654221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc------hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                       .+|...|.+.+       ..+++++++|||.+.++.....      ....+...............   ...+..++|+
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dv  227 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKS---GKQPGDPAKA  227 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhc---cCCCCCHHHH
Confidence             88988887653       2589999999999977642110      01111110000000000001   1234679999


Q ss_pred             HHHHHHHhcCCcCCCceEEee
Q 023078          196 ARAFVQVLGNEKASRQVFNIS  216 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~  216 (287)
                      |++++.+++.+... ..|.++
T Consensus       228 a~~~~~~l~~~~~~-~~~~~g  247 (277)
T PRK06180        228 AQAILAAVESDEPP-LHLLLG  247 (277)
T ss_pred             HHHHHHHHcCCCCC-eeEecc
Confidence            99999999876532 334443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=2.4e-15  Score=123.00  Aligned_cols=197  Identities=21%  Similarity=0.237  Sum_probs=130.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++.+.....     ..+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-----ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111     111111245788899999998888887632     4899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+++....                    +..++++++.      +..++|++||......           ......|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~y  159 (255)
T PRK07523         91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-----------RPGIAPY  159 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-----------CCCCccH
Confidence            9999986321                    2233444432      4678999998754211           1123345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       .++++++.+||+.+.++...... ...+...+....+         ...+..++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACV  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88988887753       46899999999999888421110 1111222222211         123667999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCccc
Q 023078          201 QVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      .++....  -.|+.+++.++..+|
T Consensus       231 ~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        231 FLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHcCchhcCccCcEEEECCCeecc
Confidence            9987533  257889998876544

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.64  E-value=1.8e-15  Score=129.30  Aligned_cols=233  Identities=16%  Similarity=0.197  Sum_probs=155.0

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecCCccccc--cCC----CCCchhhhh----hcCCcEEEEecCCCh------
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQ--QLP----GESDQEFAE----FSSKILHLKGDRKDY------   61 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~--~~~----~~~~~~~~~----~~~~~~~~~~d~~~~------   61 (287)
                      ||||||+|+-|++.|++.-   -+++++.|.+.....  .+.    ......+.+    ...++..+.||..++      
T Consensus        18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~   97 (467)
T KOG1221|consen   18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE   97 (467)
T ss_pred             EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence            8999999999999999852   389999997755211  111    000111111    135788889999753      


Q ss_pred             HHHHhhhccCCccEEEEccCC-------------CccchHHHHHhCC---CCCcEEEEeeeeEeecC---CCCCCCCCC-
Q 023078           62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETD-  121 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~-------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~---~~~~~~e~~-  121 (287)
                      .+.....+  .+|+|||+|+.             |..++.++++.|+   +.+-|+|+||+.+.-..   .+.++.+.. 
T Consensus        98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~  175 (467)
T KOG1221|consen   98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET  175 (467)
T ss_pred             HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence            45554555  89999999986             5567888888876   78899999998875211   111111100 


Q ss_pred             --------------------------CCCCCccccchHHHHHHHHh--cCCcEEEEccCceecCCCCCchhHHH------
Q 023078          122 --------------------------TVDPKSRHKGKLNTESVLES--KGVNWTSLRPVYIYGPLNYNPVEEWF------  167 (287)
Q Consensus       122 --------------------------~~~p~~~~~~k~~~E~~~~~--~~~~~~ilr~~~v~g~~~~~~~~~~~------  167 (287)
                                                ...|..|+-+|..+|.++.+  .+++.+|+||+.|..... .++..|+      
T Consensus       176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~-EP~pGWidn~~gp  254 (467)
T KOG1221|consen  176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYK-EPFPGWIDNLNGP  254 (467)
T ss_pred             CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceecccc-CCCCCccccCCCC
Confidence                                      11244455889999999864  579999999999988642 2222221      


Q ss_pred             ---HHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc----CCc-CCCceEEeeCCC--cccHHHHHHHHHHHhCC
Q 023078          168 ---FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG----NEK-ASRQVFNISGEK--YVTFDGLARACAKAAGF  236 (287)
Q Consensus       168 ---~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~----~~~-~~~~~~~~~~~~--~~s~~~i~~~i~~~~g~  236 (287)
                         +-...+|.--.+..+.+...|+|++|.++++++.+.-    +.+ ....+||+++++  ++++.++.+...+.+..
T Consensus       255 ~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~  333 (467)
T KOG1221|consen  255 DGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEK  333 (467)
T ss_pred             ceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhccc
Confidence               1112222222344677888999999999999986652    111 234699999874  49999999999888763

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.5e-15  Score=123.91  Aligned_cols=193  Identities=15%  Similarity=0.176  Sum_probs=125.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||++|++.|+++|++|++++|+.+.......     ... ...++.++++|++|++++.++++..     ++|+
T Consensus        11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138         11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-----AIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-----HHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110     011 1346788999999999888877632     6899


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +.    ..++.+++  +.++++++||.....+.           .+.+.|
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~Y  153 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----------RGRAAY  153 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----------CCccHH
Confidence            9999986321                    12    22333343  56789999997643211           112345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh----HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                       .+|...+.+.+       ..+++++.+|||.++++.....+.    +.........        ......+++++|+++
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d~a~  225 (252)
T PRK06138        154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRA--------RHPMNRFGTAEEVAQ  225 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHh--------cCCCCCCcCHHHHHH
Confidence             88888887653       248999999999998884211100    0000000000        011123788999999


Q ss_pred             HHHHHhcCCcC--CCceEEeeCC
Q 023078          198 AFVQVLGNEKA--SRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~~~~~  218 (287)
                      +++.++..+..  .|..+.+.++
T Consensus       226 ~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        226 AALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHcCchhcCccCCEEEECCC
Confidence            99999877542  4667777655

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=6.2e-15  Score=120.18  Aligned_cols=195  Identities=17%  Similarity=0.211  Sum_probs=126.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEE-EecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++ ..|+..+..+..     ........++.++.+|++|++++.++++..     .+|
T Consensus        10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063         10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETA-----EEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999877 466654321110     111122356788999999999888877642     589


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +|||++|....                    +...++++    +.  +.++||++||...+..           ..+...
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~  153 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----------LENYTT  153 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCccH
Confidence            99999985321                    12223333    22  4569999999765321           112234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|.+.|.+.+       ..+++++.++|+.+..+.... .....+........+         ...+++.+|+|+++
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  224 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPEDVANAV  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHHHHHHHH
Confidence            5 89999998863       368999999999997764211 000111111111111         12368899999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCCc
Q 023078          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ..++..+.  ..|+.+++.++..
T Consensus       225 ~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        225 LFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHcCchhcCccCCEEEECCCee
Confidence            99987643  2578888887654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=9.8e-15  Score=119.03  Aligned_cols=193  Identities=16%  Similarity=0.177  Sum_probs=126.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|++.+......     .+.. ..++.++.+|+.+++++..+++..     .+|+
T Consensus        11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231         11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765321111     0111 245788999999999998877632     6899


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+++....                     +    +..+++.+.  +.++||++||...+....           +...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~  153 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP-----------GLGW  153 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC-----------CchH
Confidence            9999986321                     1    222333333  567899999987653221           2233


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh---HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++.......   ..........         .....+++++|+|.
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~  224 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIAN  224 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHH
Confidence            5 78887776552       248999999999987663211100   0111111111         11234689999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++.++....  ..|..+.+.++.
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        225 AALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             HHHHHhCccccCCCCCeEEECCCc
Confidence            9999997543  246677777654

>PRK09186 flagellin modification protein A; Provisional

Probab=99.63  E-value=1.3e-14  Score=118.80  Aligned_cols=198  Identities=14%  Similarity=0.116  Sum_probs=126.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|++++......     .+..  ....+.++.+|+.|++++.++++..     .+
T Consensus        10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186         10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLE-----SLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHH-----HHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998655321110     0100  0234667799999999888877632     38


Q ss_pred             cEEEEccCCCc-----------------------cc----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREA-----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~-----------------------~~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |+|||+++...                       .+    ++.+++.++  +.+++|++||...+..... ...++....
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~  163 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMT  163 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccC
Confidence            99999986321                       01    233444443  5679999999764432111 111222222


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|...+.+.+       ..++++++++||.++++..     ..+........         ....+++++|+|
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~---------~~~~~~~~~dva  229 (256)
T PRK09186        164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCC---------NGKGMLDPDDIC  229 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcC---------CccCCCCHHHhh
Confidence            22235 88988887753       3579999999998876521     11222222111         012468999999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +++..++....  ..|+.+.+.++
T Consensus       230 ~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        230 GTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             hhHhheeccccccccCceEEecCC
Confidence            99999997543  25677777665

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.4e-15  Score=119.22  Aligned_cols=180  Identities=16%  Similarity=0.152  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|++|+++++.|+++ ++|++++|+.......         .....+++++++|+.|.+++.++++.. ++|.|||+
T Consensus         9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDEL---------AAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHH---------HHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999 9999999986542111         111246789999999999999888743 59999999


Q ss_pred             cCCCccc------------------------hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchH
Q 023078           80 NGREADE------------------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (287)
Q Consensus        80 a~~~~~~------------------------~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~  133 (287)
                      ++.....                        ..+++++++ ..+++|++||...++...           +...| .+|.
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~~~y~~~K~  147 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP-----------GWGSYAASKF  147 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC-----------CCchHHHHHH
Confidence            9863210                        333444444 567899999987653221           12235 8888


Q ss_pred             HHHHHHHh-----cC-CcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          134 NTESVLES-----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       134 ~~E~~~~~-----~~-~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      ..+.+++.     .+ +++..++||.+.++..     ..+..  ..+..       .....+++++|++++++.+++++.
T Consensus       148 a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~-----~~~~~--~~~~~-------~~~~~~~~~~dva~~~~~~l~~~~  213 (227)
T PRK08219        148 ALRALADALREEEPGNVRVTSVHPGRTDTDMQ-----RGLVA--QEGGE-------YDPERYLRPETVAKAVRFAVDAPP  213 (227)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEecCCccchHh-----hhhhh--hhccc-------cCCCCCCCHHHHHHHHHHHHcCCC
Confidence            87766531     24 8899999987655421     11110  00111       112467999999999999998765


Q ss_pred             CCCceEEee
Q 023078          208 ASRQVFNIS  216 (287)
Q Consensus       208 ~~~~~~~~~  216 (287)
                       .+.++++.
T Consensus       214 -~~~~~~~~  221 (227)
T PRK08219        214 -DAHITEVV  221 (227)
T ss_pred             -CCccceEE
Confidence             45677665

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.2e-14  Score=118.41  Aligned_cols=195  Identities=16%  Similarity=0.211  Sum_probs=125.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|......+.... ...+......++.++.+|+.+.+++.++++.     .++|.
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   90 (249)
T PRK12827         12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADA-VAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI   90 (249)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999988753321111110 0011122235688999999999888877642     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC-------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~-------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||++|...                    .+..++++++.       +..++|++||...+...           .+...
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  159 (249)
T PRK12827         91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN-----------RGQVN  159 (249)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----------CCCch
Confidence            999998633                    12333444421       45789999998764321           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++++|||.+.++.....+..   .......+.         ..+.+.+|+++++.
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~  227 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVA  227 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHH
Confidence            5 88887766542       2489999999999999854322211   111111111         12457899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..++.+++.++.
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        228 FLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHcCcccCCccCcEEEeCCCC
Confidence            8886532  247788887654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.2e-14  Score=119.37  Aligned_cols=198  Identities=17%  Similarity=0.185  Sum_probs=123.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|+.+.......     ...  ..++.++.+|+.|++++.++++.     .++|+
T Consensus        17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-----RLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999997654221100     000  12568899999999988877753     27899


Q ss_pred             EEEccCCC-cc--------------------chHHHHHhC----C--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGRE-AD--------------------EVEPILDAL----P--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~l~~a~----~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |||+++.. ..                    +...+++++    +  +. ++++++||.......           .+..
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-----------~~~~  158 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-----------PGRT  158 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-----------CCCc
Confidence            99999864 11                    123333332    2  33 567888775432110           1122


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc-ccC---CCCCceeeeeeHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIP---GSGIQVTQLGHVKDL  195 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~i~~~Dv  195 (287)
                      .| .+|...|.+++       ..+++++++|||+++++.... ........  .+... ...   ........+++++|+
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  235 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR-VIEARAQQ--LGIGLDEMEQEYLEKISLGRMVEPEDI  235 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH-Hhhhhhhc--cCCChhHHHHHHHhcCCCCCCCCHHHH
Confidence            35 88888887753       248999999999999985211 11100000  00000 000   000012358999999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++++..++...  ...++.|++.++.
T Consensus       236 a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        236 AATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             HHHHHHHcCccccCccCcEEEeCCCc
Confidence            99998887642  2357899998875

>PRK06128 oxidoreductase; Provisional

Probab=99.62  E-value=1.9e-14  Score=120.48  Aligned_cols=197  Identities=19%  Similarity=0.255  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++..++.+... +..    ...+.....++.++.+|+++.+++.++++..     ++|
T Consensus        61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEV----VQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH----HHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999998877543211 000    0111122346778899999998887777532     689


Q ss_pred             EEEEccCCCc---------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      ++||++|...                     .+...+++++    +...++|++||...|....           ....|
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y  205 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP-----------TLLDY  205 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----------CchhH
Confidence            9999998631                     1223344443    3335899999988764321           11235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..|++++.++||.+.++.... .........+....+         ...+...+|+|.+++
T Consensus       206 ~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~  276 (300)
T PRK06128        206 ASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQPVEMAPLYV  276 (300)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcCHHHHHHHHH
Confidence             89998887763       358999999999999985321 111222222222211         123567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCcc
Q 023078          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      .++....  ..|+.|++.++..+
T Consensus       277 ~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        277 LLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHhCccccCccCcEEeeCCCEeC
Confidence            9887543  25789999987654

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.5e-14  Score=117.80  Aligned_cols=194  Identities=20%  Similarity=0.193  Sum_probs=123.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++..++........    ...+.....++.++.+|++|.+++.++++..     .+|+
T Consensus         8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999887765433211111    1112222346778999999998888877632     5899


Q ss_pred             EEEccCCCcc---------------------chHHHHHhCC-----C----CCcEEEEeeeeE-eecCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD---------------------EVEPILDALP-----N----LEQFIYCSSAGV-YLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a~~-----~----~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~  124 (287)
                      |||+++....                     +..++++++.     .    ..++|++||... ++...           
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----------  152 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-----------  152 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC-----------
Confidence            9999986421                     1222333321     1    236899999754 32111           


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|...+.+++       ..+++++++||+.++++.......+..........++.         -+.+++|++
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~d~a  223 (248)
T PRK06123        153 EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG---------RGGTAEEVA  223 (248)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            01125 89999887653       24899999999999998532222222233333322221         123689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +++..++....  ..|+.|++.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        224 RAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHhCccccCccCCEEeecCC
Confidence            99999887542  36788988765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.2e-14  Score=119.44  Aligned_cols=195  Identities=19%  Similarity=0.225  Sum_probs=128.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.....+.+.    ..+.....++.++.+|+++.+.+.++++.     ..+|+
T Consensus        52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK----QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987543111110    11111134678899999999888877763     26899


Q ss_pred             EEEccCCCc---------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      |||+++...                     .+..++++++    +...++|++||...|.....           ...| 
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~-----------~~~Y~  196 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET-----------LIDYS  196 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC-----------cchhH
Confidence            999998621                     1223333333    23358999999887643211           1235 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       ..+++++.++||.++.+................         ......+.+++|+|++++.+
T Consensus       197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHH
Confidence            88888877653       248999999999998874222111111111111         11123578899999999999


Q ss_pred             hcCCc--CCCceEEeeCCC
Q 023078          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~  219 (287)
                      +....  ..|..+++.++.
T Consensus       268 l~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             cCcccCCccCcEEEeCCCc
Confidence            87643  367888887764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.61  E-value=9.7e-15  Score=120.62  Aligned_cols=212  Identities=14%  Similarity=0.103  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++.+|+.+...+..     .++.....++.++.+|++|.+++.++++..     .+|+
T Consensus        12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876         12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865532111     111222345788899999999888877632     5899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC-----C-C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL-----P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~-----~-~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|...                    .+..++.+++     + + ..++|++||...+.+           ..+...
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----------~~~~~~  155 (275)
T PRK05876         87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----------NAGLGA  155 (275)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----------CCCCch
Confidence            999998621                    1223344442     1 2 468999999876422           122334


Q ss_pred             c-cchHHHHHH----HH---hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESV----LE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~----~~---~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+    ..   ..++++++++|+.+.++...... ................+......++++++|+|++++
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hhcCccccccccccccccccccccCCCHHHHHHHHH
Confidence            6 888864433    32   35899999999998777421110 000000000011111222234567899999999999


Q ss_pred             HHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhC
Q 023078          201 QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g  235 (287)
                      ..+.++    +.+.+.+  +.....+.+...+...
T Consensus       235 ~ai~~~----~~~~~~~--~~~~~~~~~~~~~~~~  263 (275)
T PRK05876        235 DAILAN----RLYVLPH--AASRASIRRRFERIDR  263 (275)
T ss_pred             HHHHcC----CeEEecC--hhhHHHHHHHHHHHHH
Confidence            999864    2444442  3445555555544443

>PRK06182 short chain dehydrogenase; Validated

Probab=99.61  E-value=6.5e-15  Score=121.68  Aligned_cols=193  Identities=16%  Similarity=0.123  Sum_probs=124.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..           ..+++++.+|++|.+++.++++..     ++|+
T Consensus         9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532111           236888999999999888877632     7899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +    +..++..++  +..++|++||.+.+...           .....|
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  146 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT-----------PLGAWY  146 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC-----------CCccHh
Confidence            9999986321                    1    233444554  56799999996532110           011235


Q ss_pred             -cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc--------ccCCCCCceeeeeeHH
Q 023078          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--------PIPGSGIQVTQLGHVK  193 (287)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~  193 (287)
                       .+|...+.+.       ...++++++++||.+.++..... ...+... ..+...        ...........+.+.+
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-ADHLLKT-SGNGAYAEQAQAVAASMRSTYGSGRLSDPS  224 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-hhhhccc-ccccchHHHHHHHHHHHHHhhccccCCCHH
Confidence             8899888764       24689999999999988742100 0000000 000000        0000001123567899


Q ss_pred             HHHHHHHHHhcCCcCCCceEEeeCC
Q 023078          194 DLARAFVQVLGNEKASRQVFNISGE  218 (287)
Q Consensus       194 Dva~~~~~~~~~~~~~~~~~~~~~~  218 (287)
                      |+|++++.++.... ....|+++.+
T Consensus       225 ~vA~~i~~~~~~~~-~~~~~~~g~~  248 (273)
T PRK06182        225 VIADAISKAVTARR-PKTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHHHhCCC-CCceeecCcc
Confidence            99999999988643 2346776544

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.1e-14  Score=119.38  Aligned_cols=194  Identities=15%  Similarity=0.149  Sum_probs=124.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++..... +.    ..+.....++.++.+|+++.+++..+++.     ..+|+
T Consensus        11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890         11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDE-VA----AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH----HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999999999998654221 11    11111134678999999999888776653     26899


Q ss_pred             EEEccCCCcc---------------------chHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD---------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                     +...+++++.     ...++|++||...+..           ..+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  154 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----------QPKYGAY  154 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----------CCCcchh
Confidence            9999986311                     1223344432     3358999999765321           1122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch----------hHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                       .+|...+.+.+       ..+++++.++||.++++.....+          ...+.....+.         .....+.+
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  225 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPT  225 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCC
Confidence             88988887663       24899999999999998421100          00111111111         11224678


Q ss_pred             HHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++|+++++..++...  .-.|+.+.+.++.
T Consensus       226 ~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        226 DDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            999999999888752  2256666666553

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.61  E-value=2.8e-14  Score=116.03  Aligned_cols=193  Identities=20%  Similarity=0.261  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||||++|+++++.|+++|++|+++.|+.........    ..+.....++.++.+|+.+.+++.+++++     .++|+
T Consensus        11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557         11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999898887653111110    11111235678889999999888877663     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+++...                    .+..++++++    .  +.++|+++||... ++..            ....
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------~~~~  154 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------GQAN  154 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------CCch
Confidence            999998632                    1223334333    2  4568999998753 2211            1223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|.+.+.+++       ..++++++++||.+.++.. ......+........+         ...+.+++|+++++.
T Consensus       155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  224 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMT-DALPEDVKEAILAQIP---------LGRLGQPEEIASAVA  224 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccc-cccChHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            5 88887776552       3589999999998865532 1222222222222221         123568899999998


Q ss_pred             HHhcC--CcCCCceEEeeCCC
Q 023078          201 QVLGN--EKASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~--~~~~~~~~~~~~~~  219 (287)
                      .++..  ....++.|++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        225 FLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHcCcccCCccccEEEecCCc
Confidence            88765  23367899998764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.60  E-value=2.4e-14  Score=116.53  Aligned_cols=194  Identities=18%  Similarity=0.198  Sum_probs=125.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.++.....+..    ..++.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL----VNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999987665432211111    011112234688899999999988888774     24899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +...+++++.      +..++|++||...+.+.           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y  156 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FGQTNY  156 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CCCcch
Confidence            9999987321                    1233333431      45689999997543211           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++++++||.+.++.... ............         .....+.+++|+++++..
T Consensus       157 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~  226 (247)
T PRK12935        157 SAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVY  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHH
Confidence             88887776652       248999999999987763211 111111121111         122457899999999999


Q ss_pred             HhcCCc-CCCceEEeeCCC
Q 023078          202 VLGNEK-ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~-~~~~~~~~~~~~  219 (287)
                      +++... ..++.||+.++.
T Consensus       227 ~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        227 LCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HcCcccCccCCEEEeCCCc
Confidence            887542 367899998763

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.6e-15  Score=118.66  Aligned_cols=189  Identities=16%  Similarity=0.193  Sum_probs=126.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|++|+++++.|+++|++|++++|+.++..+..         . ..+..++.+|+++.+.+.++++.. .+|+|||+
T Consensus        15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---------~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060         15 TGASSGIGRACAVALAQRGARVVAAARNAAALDRLA---------G-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------H-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999865422111         0 124678899999998888887642 48999999


Q ss_pred             cCCCcc--------------------chHHHHHhCC------C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           80 NGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        80 a~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      ++....                    +..++++++.      + ..++|++||...+.+..           +...| .+
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~y~~s  153 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-----------DHLAYCAS  153 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----------CCcHhHHH
Confidence            986321                    2233344332      1 36899999987543211           12335 89


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      |...|.+.+       ..+++++.+||+.++++.....+. ......+...         .....+++++|+++++..++
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~  224 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDVAAPILFLL  224 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHc
Confidence            998888663       247999999999999885321110 0011111111         11235789999999999999


Q ss_pred             cCCc--CCCceEEeeCCC
Q 023078          204 GNEK--ASRQVFNISGEK  219 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~~  219 (287)
                      ..+.  ..|+.+++.++.
T Consensus       225 ~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        225 SDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CcccCCccCcEEeECCCc
Confidence            7643  257888887653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.60  E-value=1.9e-14  Score=117.49  Aligned_cols=193  Identities=16%  Similarity=0.111  Sum_probs=124.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+.+++.|+++|++|++++|+...   ..           ..++.++++|+.+.+++.++++.     ..+|+
T Consensus        14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---QE-----------DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecchhh---hc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997611   11           24678899999999888887763     24899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +...+++++    +  +..++|++||......           ..+...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~~Y  148 (252)
T PRK08220         80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----------RIGMAAY  148 (252)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----------CCCCchh
Confidence            9999986321                    122234442    2  4568999998754211           1123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHH-HHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..++++++++||.++++.....+.... ......+....+ ........+++++|+|++++
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF-KLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH-hhcCCCcccCCHHHHHHHHH
Confidence             88988887763       368999999999998884211000000 000000000000 00112235789999999999


Q ss_pred             HHhcCC--cCCCceEEeeCCC
Q 023078          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (287)
                      .++...  ...++.+.+.++.
T Consensus       228 ~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        228 FLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHhcchhcCccCcEEEECCCe
Confidence            988653  2356777777664

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.59  E-value=3e-14  Score=116.09  Aligned_cols=194  Identities=14%  Similarity=0.126  Sum_probs=128.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|++.+.....     ..+.....++.++.+|+++.+++.++++.     .++|+
T Consensus        13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939         13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA-----AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998866422111     11112234688999999999988887753     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    +..++++++    .  +..++|++||...+.+..           ....|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~y  156 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------KLGAY  156 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------CcchH
Confidence            9999986321                    122333332    2  345899999976532211           12235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+.........+.......         .....+++++|+|+++..
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~  227 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKG---------RALERLQVPDDVAGAVLF  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhc---------CCCCCCCCHHHHHHHHHH
Confidence             88888887663       3579999999998877642110000111222221         122356889999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|+.+++.++.
T Consensus       228 l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        228 LLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HhCccccCccCcEEEECCCc
Confidence            987642  367888888764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.59  E-value=3.2e-14  Score=115.92  Aligned_cols=193  Identities=18%  Similarity=0.196  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++++|+.+.+++.++++.     ..+|+
T Consensus         9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA-----ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111     11122235688999999999888887653     25899


Q ss_pred             EEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+++...                    .+..+++++    ++  +..++|++||...+.....           ...|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~-----------~~~Y  152 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG-----------EAVY  152 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC-----------CchH
Confidence            999998521                    112223333    32  5678999999877543211           1235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-----hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       .+|.+.+.+.+       ..++++++++||.++++.....     ....+...+....+         ...+...+|+|
T Consensus       153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva  223 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP---------LGRLGQPDDLP  223 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC---------ccCCcCHHHHH
Confidence             88877766553       2489999999999988731100     00011112122111         11245679999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +++..++....  ..|+.+++.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       224 GAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             HHHHHHcCcccCCCcCcEEEeCCC
Confidence            99999887543  25788998765

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06194 hypothetical protein; Provisional

Probab=99.59  E-value=2.8e-14  Score=118.76  Aligned_cols=196  Identities=15%  Similarity=0.148  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194         12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-----AELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765422111     111111245778999999999888877632     4799


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--C------CCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~------~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      |||++|....                    +..++.++    +.  +      ..++|++||...+...           
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  155 (287)
T PRK06194         87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----------  155 (287)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----------
Confidence            9999987321                    12222222    21  1      2589999998765322           


Q ss_pred             CCCccc-cchHHHHHHHH----h-----cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          124 DPKSRH-KGKLNTESVLE----S-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~----~-----~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      .+.+.| .+|...+.+.+    +     .++++..+.|+.+..+-          .....+++..+.+++.+.+++++++
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  225 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI----------WQSERNRPADLANTAPPTRSQLIAQ  225 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc----------ccccccCchhcccCccccchhhHHH
Confidence            122346 89999887763    2     23566667776554331          1112234455556667788888888


Q ss_pred             HHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       194 Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      |++..+....                .++..|+++.+.+......
T Consensus       226 ~~~~~~~~~~----------------~~s~~dva~~i~~~~~~~~  254 (287)
T PRK06194        226 AMSQKAVGSG----------------KVTAEEVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHhhhhcc----------------CCCHHHHHHHHHHHHHcCC
Confidence            8887653211                1688889998888776443

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.5e-14  Score=118.77  Aligned_cols=181  Identities=20%  Similarity=0.251  Sum_probs=120.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++.+..+..     ..+.....++.++.+|+.|.+.+..+++..     ++|+
T Consensus         7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111222356888999999998888777632     6899


Q ss_pred             EEEccCCCcc---------------------chHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                     +..++++++    . +..++|++||...+...           .+...|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y  150 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----------PTRSGY  150 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------CCccHH
Confidence            9999986321                     122333443    2 45789999998765321           122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+.....     ..  ..+.+..  ..+.....+++++|+|+++..
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-----~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~  221 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA-----LD--GDGKPLG--KSPMQESKIMSAEECAEAILP  221 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh-----cc--ccccccc--cccccccCCCCHHHHHHHHHH
Confidence             88998887753       3589999999999877632110     00  0111111  112233478999999999999


Q ss_pred             HhcCC
Q 023078          202 VLGNE  206 (287)
Q Consensus       202 ~~~~~  206 (287)
                      +++..
T Consensus       222 ~~~~~  226 (263)
T PRK06181        222 AIARR  226 (263)
T ss_pred             HhhCC
Confidence            99863

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.58  E-value=8.5e-14  Score=113.10  Aligned_cols=194  Identities=21%  Similarity=0.271  Sum_probs=123.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.|+.......+    ...+.....++.++.+|+++.+++.++++..     ++|+
T Consensus        11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937         11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADEL----VAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999988887654321111    1112222356888999999998888877632     6899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||++|...                    .+..++++++    +...++|++||...+..           ..+.+.| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~  155 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-----------LPGYGPYAA  155 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC-----------CCCCchhHH
Confidence            999998632                    1122333332    23358999998765321           1122346 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+++       ..++.++.++||.+-.+.............+....+.         ..+.+++|+++++..++
T Consensus       156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~  226 (245)
T PRK12937        156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL---------ERLGTPEEIAAAVAFLA  226 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHc
Confidence            8998887763       2478999999998766531111111222233322221         12446799999999888


Q ss_pred             cCCc--CCCceEEeeCC
Q 023078          204 GNEK--ASRQVFNISGE  218 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~  218 (287)
                      ....  ..|+.+++.++
T Consensus       227 ~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CccccCccccEEEeCCC
Confidence            6543  25778887654

>PRK08324 short chain dehydrogenase; Validated

Probab=99.57  E-value=1.4e-14  Score=133.68  Aligned_cols=202  Identities=15%  Similarity=0.133  Sum_probs=132.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.........     .+.. ..++.++.+|+++.+++.++++..     ++|+
T Consensus       428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-----~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-----ELGG-PDRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-----HHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765221110     0110 136788999999998888777532     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||++|....                    +...++++    ++  +. .+||++||...+...           .....
T Consensus       502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----------~~~~~  570 (681)
T PRK08324        502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----------PNFGA  570 (681)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------CCcHH
Confidence            9999985321                    23344333    23  33 689999997653211           11234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCcee-cCCCCCchhHHHHHHHHcCCCc----ccCCCCCceeeeeeHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI----PIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~Dv  195 (287)
                      | .+|...+.+.+       ..++++++++|+.+| +......... ..+....+...    ..+........+++++|+
T Consensus       571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~Dv  649 (681)
T PRK08324        571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI-EARAAAYGLSEEELEEFYRARNLLKREVTPEDV  649 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh-hhhhhhccCChHHHHHHHHhcCCcCCccCHHHH
Confidence            6 89999888764       246999999999998 5532211110 00111111110    112334455678999999


Q ss_pred             HHHHHHHhc--CCcCCCceEEeeCCCc
Q 023078          196 ARAFVQVLG--NEKASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~--~~~~~~~~~~~~~~~~  220 (287)
                      |+++..++.  .....|.++++.++..
T Consensus       650 A~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        650 AEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCch
Confidence            999999884  3444688999988764

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.6e-13  Score=109.48  Aligned_cols=182  Identities=21%  Similarity=0.239  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|+||+++++.|+++|++|++++|+....                ...+++.+|+++.+++.++++.    .++|+|
T Consensus         9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            79999999999999999999999999986541                1125789999998877766652    368999


Q ss_pred             EEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           77 YDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      ||+++....                    +    ...++.+++  +..++|++||...|+...            ...| 
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~Y~  140 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD------------RTSYS  140 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC------------chHHH
Confidence            999986321                    1    122334343  567999999987654211            1235 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC--chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|...+.+.+       ..+++++.+|||.+..+....  +.............+         .-.+...+|+|.++.
T Consensus       141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~  211 (234)
T PRK07577        141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP---------MRRLGTPEEVAAAIA  211 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC---------CCCCcCHHHHHHHHH
Confidence            88988887653       358999999999988764211  000111111111111         112346799999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++..+.  ..|+.+.+.++.
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        212 FLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHhCcccCCccceEEEecCCc
Confidence            9987642  357788877654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7.1e-14  Score=112.48  Aligned_cols=194  Identities=18%  Similarity=0.191  Sum_probs=127.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|++|+.+++.|+++|++|++++|++........     ... ...+++++.+|+++.+++.++++.. .+|++||+
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR-----ALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998654221110     010 1356889999999999999988743 37999999


Q ss_pred             cCCCcc--------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHH
Q 023078           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      ++....                    +..++.++..  +..++|++||...+...           .+...| .+|...+
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------CcchHHHHHHHHHH
Confidence            986321                    1223344322  56799999998765321           123346 8899988


Q ss_pred             HHHHh-----cCCcEEEEccCceecCCCCC---chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          137 SVLES-----KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       137 ~~~~~-----~~~~~~ilr~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      .+.+.     .+++++.++|+.+-.+....   .....+........+.         ..+...+|+|+++..++.....
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~  216 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAANGFT  216 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcCCCc
Confidence            87643     25778888898775542100   0001111111111111         1234679999999999987655


Q ss_pred             CCceEEeeCCCc
Q 023078          209 SRQVFNISGEKY  220 (287)
Q Consensus       209 ~~~~~~~~~~~~  220 (287)
                      .|+.|++.++.+
T Consensus       217 ~G~~~~v~gg~~  228 (230)
T PRK07041        217 TGSTVLVDGGHA  228 (230)
T ss_pred             CCcEEEeCCCee
Confidence            688999988754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.57  E-value=8.3e-14  Score=113.25  Aligned_cols=194  Identities=19%  Similarity=0.242  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEe-cCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||+++++.|+++|++|+++. |+.+...+..     .++.....++.++.+|+.|++++.++++.     .++|
T Consensus         7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-----NLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999998754 5433211110     11111134578899999999988887763     2578


Q ss_pred             EEEEccCCCcc---------------------chHHHHHh----CC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           75 VVYDINGREAD---------------------EVEPILDA----LP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~~~~l~~a----~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +|||+++....                     +...++++    +.     ...+||++||...+.+..          .
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~----------~  151 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP----------G  151 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC----------C
Confidence            99999986311                     01111111    11     135699999976532111          0


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|...+.+++       ..+++++++||+.+++|.......+..........+..         -..+.+|+|
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva  222 (247)
T PRK09730        152 EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVA  222 (247)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            11125 88888876653       35899999999999998532211122222222222211         123689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +++..++....  ..++.+.+.++
T Consensus       223 ~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        223 QAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHhhcChhhcCccCcEEecCCC
Confidence            99998887532  35667777654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.57  E-value=5.9e-14  Score=116.18  Aligned_cols=135  Identities=15%  Similarity=0.217  Sum_probs=100.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC------Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~------~~d   74 (287)
                      |||+|+||+++++.|.++|++|++++|+++.... +.          ..+++++.+|++|.+++.++++..      .+|
T Consensus        10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993         10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-LE----------AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            7999999999999999999999999998665321 11          236788999999998877776532      589


Q ss_pred             EEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||++|....                    +    ++.+++.++  +..++|++||...+..           ..+...
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  147 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-----------MKYRGA  147 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC-----------CCccch
Confidence            99999986321                    1    345566665  6679999999754311           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecC
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~  157 (287)
                      | .+|...+.+.+       ..++++++++||.+-.+
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            6 89999988753       46899999999988665

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.56  E-value=1.4e-13  Score=111.38  Aligned_cols=192  Identities=20%  Similarity=0.257  Sum_probs=123.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      ||++|+||+++++.|+++|++|++++|+.......+    .........++.++.+|++|.+++.++++.     ..+|.
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEV----VEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999763211111    011122234578899999999988887753     25799


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC------CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||++|....                    +..++++++.      +.++|+++||... +|..            +...
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------~~~~  147 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------GQAN  147 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------CCch
Confidence            9999986421                    1233444432      4568999999753 3321            1123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..++.+++++|+.+.++.. ......+........+         ..-+.+++|++++++
T Consensus       148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~  217 (239)
T TIGR01830       148 YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT-DKLSEKVKKKILSQIP---------LGRFGTPEEVANAVA  217 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhh-hhcChHHHHHHHhcCC---------cCCCcCHHHHHHHHH
Confidence            5 77877766542       3589999999998866521 1111222222222211         122557899999999


Q ss_pred             HHhcCC--cCCCceEEeeCC
Q 023078          201 QVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~  218 (287)
                      .++...  ...+++|++.++
T Consensus       218 ~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       218 FLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHhCcccCCcCCCEEEeCCC
Confidence            888543  336789998754

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.56  E-value=1.3e-13  Score=112.98  Aligned_cols=197  Identities=16%  Similarity=0.189  Sum_probs=126.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+..+.....     ..+.....++.++.+|++|++++.++++.     ..+|+
T Consensus        18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-----AHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999765422111     11111234678899999999888666643     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC-----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~-----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+++...                    .+..++++++     .  +..+||++||...+......       ..+...
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~~~~  165 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMDTIA  165 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccCcch
Confidence            999998521                    1233444432     2  45689999997654322110       112344


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+++       ..++++..++|+.+-.+.. ....+.+.+......++.         -+...+|+++++.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~  235 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT-RGTLERLGEDLLAHTPLG---------RLGDDEDLKGAAL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch-hhhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHH
Confidence            6 88998887764       2479999999998866532 122333333333333221         1235799999988


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|..+++.++.
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        236 LLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHhCccccCccCCEEEECCCe
Confidence            8876532  257777777653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.54  E-value=6.1e-14  Score=114.23  Aligned_cols=179  Identities=16%  Similarity=0.102  Sum_probs=116.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|++|.++++.|+++|++|++++|++.+.....        .....++.++.+|+.+.+++.++++.     .++|.
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866522111        01124688899999999888777653     26999


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                     +    +..++.+++  +..++|++||...+.           ...+...
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~  146 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGGNV  146 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCCCch
Confidence            9999986310                     1    233444443  567899999976421           1112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..++.++.++||.+.|+.........-.....     ..+.    ...++..+|+|++++
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~dvA~~~~  217 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE-----KTYQ----NTVALTPEDVSEAVW  217 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHH-----hhcc----ccCCCCHHHHHHHHH
Confidence            6 88888887653       25799999999998766311000000000000     0000    113568999999999


Q ss_pred             HHhcCCc
Q 023078          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      .++..+.
T Consensus       218 ~l~~~~~  224 (248)
T PRK10538        218 WVATLPA  224 (248)
T ss_pred             HHhcCCC
Confidence            9987643

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.4e-13  Score=112.16  Aligned_cols=189  Identities=21%  Similarity=0.242  Sum_probs=120.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++++|+.+.+++.++++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500         12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEAAR--------AELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999754422111        11124677889999998776655442     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC----CCCcEEEEeeee-EeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~----~~~~~i~~Ss~~-~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||++|...                    .+..++++++.    ...++|++||.. .|+..            ..+.| 
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~~~~Y~  151 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------NSSVYA  151 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------CccHHH
Confidence            999998621                    12334445542    334677777744 33211            12346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      .+|...|.+.+       ..++++++++||.+++|...     ......+.+.+....++.         -+..++|+|+
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~  222 (249)
T PRK06500        152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAK  222 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            88999888763       24899999999999987311     111122223333322211         1347899999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      ++..++....  ..|..+.+.++
T Consensus       223 ~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        223 AVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHcCccccCccCCeEEECCC
Confidence            9999887533  24556666554

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.5e-13  Score=112.43  Aligned_cols=192  Identities=15%  Similarity=0.147  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+..... ...     ...  ..++.++.+|+++.+++.++++..     .+|+
T Consensus        21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~-----~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         21 TGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAA-----QLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-----Hhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999764311 100     000  235678899999998887776532     6899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|...                    .+..++++++    +  +..++|++||.....+..           ....|
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y  161 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE-----------RHVAY  161 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC-----------CCchH
Confidence            999998632                    1223333332    2  457899999976421111           11235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+.....+............         ....+.+++|++++++.
T Consensus       162 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~  232 (255)
T PRK06841        162 CASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLI---------PAGRFAYPEEIAAAALF  232 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence             88888776652       35899999999998776421111111111111111         11246789999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  -.|+.+.+.++..
T Consensus       233 l~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        233 LASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             HcCccccCccCCEEEECCCcc
Confidence            987643  2678888877653

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.54  E-value=7.2e-14  Score=114.46  Aligned_cols=193  Identities=18%  Similarity=0.180  Sum_probs=125.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+++.. +.     ...+.....++.++.+|+++.+++..+++.     ..+|.
T Consensus        13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628         13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EF-----AEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999987652 11     112222245688999999999888877763     26899


Q ss_pred             EEEccCCCcc-------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD-------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      |||++|....                   +...+.++    ++ ...+++++||...+.+.           .+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y~~  155 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ-----------GGTSGYAA  155 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-----------CCCchhHH
Confidence            9999985321                   11122222    22 34689999997653211           122346 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH------HHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE------WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      +|...+.+.+       ..+++++.++||.++++.... ...      .....+...  .+      ....++.++|+|+
T Consensus       156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~dva~  226 (258)
T PRK08628        156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN-WIATFDDPEAKLAAITAK--IP------LGHRMTTAEEIAD  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH-HhhhccCHHHHHHHHHhc--CC------ccccCCCHHHHHH
Confidence            9999887763       357999999999999874211 000      000111111  00      0014678899999


Q ss_pred             HHHHHhcCC--cCCCceEEeeCCC
Q 023078          198 AFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++..++...  ...|+.+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        227 TAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHhChhhccccCceEEecCCc
Confidence            999998764  2356777776653

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.6e-13  Score=111.13  Aligned_cols=196  Identities=15%  Similarity=0.166  Sum_probs=124.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.+......+.+.    ........++.++.+|++|.+++.++++.     -.+|+
T Consensus        15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988775432111110    01111134688899999999888877753     14899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-cc
Q 023078           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~~  128 (287)
                      |||++|...                    .+...+++++.      ...++|+++|...+.            ..|. ..
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~------------~~p~~~~  158 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN------------LNPDFLS  158 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC------------CCCCchH
Confidence            999998521                    12333444322      235677777654332            1222 24


Q ss_pred             c-cchHHHHHHHHh------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~-~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      | .+|...|.+.+.      .++.++.++||.+......  ....+ .......+.   +      ...+++|+|++++.
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~--~~~~~-~~~~~~~~~---~------~~~~~~d~a~~~~~  226 (258)
T PRK09134        159 YTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ--SPEDF-ARQHAATPL---G------RGSTPEEIAAAVRY  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc--ChHHH-HHHHhcCCC---C------CCcCHHHHHHHHHH
Confidence            6 999888776532      2489999999988765321  11111 121221111   1      23668999999999


Q ss_pred             HhcCCcCCCceEEeeCCCcccHH
Q 023078          202 VLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~  224 (287)
                      +++.+...++.|++.++..+++.
T Consensus       227 ~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        227 LLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HhcCCCcCCCEEEECCCeecccc
Confidence            99876667889998887655543

>PRK06196 oxidoreductase; Provisional

Probab=99.54  E-value=2.1e-13  Score=114.96  Aligned_cols=190  Identities=19%  Similarity=0.106  Sum_probs=117.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+..+..+...        . ..++.++.+|++|.+++.++++.     .++|+
T Consensus        32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~--------~-l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA--------G-IDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------H-hhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            7999999999999999999999999998665322111        0 12478899999999888777653     26899


Q ss_pred             EEEccCCCcc------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCC-CCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~-~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||....                  +    ++.++..++  +..++|++||.+...... ...........+...| 
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            9999986311                  1    233344443  457999999975432111 0001111122233346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHH--HHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF--HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|...+.+.+       ..++++++++||.+.++...........  ..+.... .++ .     ..+..++|+|..++
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~a~~~~  255 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPAQGAATQV  255 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHhHHHHHHH
Confidence            89998876642       3589999999999998843211000000  0000000 000 0     02456899999999


Q ss_pred             HHhcCC
Q 023078          201 QVLGNE  206 (287)
Q Consensus       201 ~~~~~~  206 (287)
                      .++..+
T Consensus       256 ~l~~~~  261 (315)
T PRK06196        256 WAATSP  261 (315)
T ss_pred             HHhcCC
Confidence            988653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.54  E-value=8.1e-14  Score=114.06  Aligned_cols=188  Identities=15%  Similarity=0.074  Sum_probs=116.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|++....+ +.    ........++.++.+|+.|.+++.+++.. ++|+|||++
T Consensus         8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~id~vi~~a   81 (257)
T PRK09291          8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LR----AEAARRGLALRVEKLDLTDAIDRAQAAEW-DVDVLLNNA   81 (257)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCcceEEEeeCCCHHHHHHHhcC-CCCEEEECC
Confidence            7999999999999999999999999998654211 10    00111134688899999999999887753 799999999


Q ss_pred             CCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchH
Q 023078           81 GREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (287)
Q Consensus        81 ~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~  133 (287)
                      |....                    +    .+.+++.+.  +.+++|++||...+...           .....| .+|.
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----------~~~~~Y~~sK~  150 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-----------PFTGAYCASKH  150 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-----------CCcchhHHHHH
Confidence            85311                    1    122334333  56799999987542111           112235 8899


Q ss_pred             HHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       134 ~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      ..|.+.+       ..+++++++|||.+..+... .....+........ .+.. .+.....+.+..+|++..+..++..
T Consensus       151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND-TMAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEecCcccccchh-hhhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcC
Confidence            8887642       36899999999987543211 11100100000000 0111 1112233557899999999888876


Q ss_pred             Cc
Q 023078          206 EK  207 (287)
Q Consensus       206 ~~  207 (287)
                      +.
T Consensus       229 ~~  230 (257)
T PRK09291        229 DT  230 (257)
T ss_pred             CC
Confidence            43

>PRK05717 oxidoreductase; Validated

Probab=99.53  E-value=2.2e-13  Score=111.36  Aligned_cols=191  Identities=16%  Similarity=0.131  Sum_probs=122.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..        .....++.++.+|+++.+++.++++..     .+|+
T Consensus        16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA--------KALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999988765422111        011246788999999988876655431     5899


Q ss_pred             EEEccCCCcc----------------------chHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD----------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                      +..++++++.     ...++|++||...+....           ....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~-----------~~~~  156 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP-----------DTEA  156 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC-----------CCcc
Confidence            9999986321                      2334455542     346799999876532111           1123


Q ss_pred             c-cchHHHHHHHH----h--cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       129 ~-~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      | .+|...+.+.+    +  .+++++.++||.+.++.........+...... . .+       ...+.+++|++.++..
T Consensus       157 Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~-~-~~-------~~~~~~~~~va~~~~~  227 (255)
T PRK05717        157 YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHA-Q-HP-------AGRVGTVEDVAAMVAW  227 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhh-c-CC-------CCCCcCHHHHHHHHHH
Confidence            5 99999887764    2  25899999999998874221111111111011 0 10       1135688999999998


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|+.+.+.++.
T Consensus       228 l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        228 LLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HcCchhcCccCcEEEECCCc
Confidence            886532  256778776553

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.53  E-value=3.1e-13  Score=109.73  Aligned_cols=196  Identities=18%  Similarity=0.223  Sum_probs=126.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ........++.++.+|+.+.+++.++++.     ..+|+
T Consensus         8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998532111100    00011124688999999999888777753     15899


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+++....                    +..+    +++.++  +..++|++||...+.+..           ....|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~Y  152 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF-----------GQTNY  152 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-----------CChHH
Confidence            9999986321                    1222    344443  567999999977653211           11235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++++++|+.+.++.... ........+....+         ...+...+|+++++..
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~  222 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQIP---------MKRLGTPEEIAAAVAF  222 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence             88887766542       357999999999998774211 11222222222221         1234568999999988


Q ss_pred             HhcCCc--CCCceEEeeCCCcc
Q 023078          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++....  -.|+.+++.++..+
T Consensus       223 l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        223 LVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HcCccccCccCcEEEECCCeec
Confidence            886432  36889999887643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.53  E-value=1e-13  Score=112.27  Aligned_cols=173  Identities=21%  Similarity=0.229  Sum_probs=116.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|++.+..+..     .++.....++.++.+|+++++++.++++..     .+|+
T Consensus        13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666         13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999865422111     112222346888999999999888877632     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    +..++.+++    .  +.+++|++||...+.+.           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y  156 (239)
T PRK07666         88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----------AVTSAY  156 (239)
T ss_pred             EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----------CCCcch
Confidence            9999986321                    122233332    1  56789999997654221           122335


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++|||.+.++.....           ....   +.   ...++..+|+|+++..
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~---~~---~~~~~~~~~~a~~~~~  219 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GLTD---GN---PDKVMQPEDLAEFIVA  219 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------cccc---cC---CCCCCCHHHHHHHHHH
Confidence             77887766542       3589999999999877731100           0000   11   1245788999999999


Q ss_pred             HhcCC
Q 023078          202 VLGNE  206 (287)
Q Consensus       202 ~~~~~  206 (287)
                      ++..+
T Consensus       220 ~l~~~  224 (239)
T PRK07666        220 QLKLN  224 (239)
T ss_pred             HHhCC
Confidence            99875

>PRK08017 oxidoreductase; Provisional

Probab=99.53  E-value=1.4e-13  Score=112.63  Aligned_cols=177  Identities=15%  Similarity=0.136  Sum_probs=117.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+... +        .  ..+++.+.+|+.+.+++.++++.      ..+|
T Consensus         8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~--------~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-M--------N--SLGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-H--------H--hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            7999999999999999999999999998655211 1        1  13578899999998877665542      2578


Q ss_pred             EEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      .++|++|....                    +    ...++++++  +.+++|++||...+.+.           .....
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~  145 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-----------PGRGA  145 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC-----------CCccH
Confidence            99999986321                    1    112355554  56789999986432111           12234


Q ss_pred             c-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...|.+.       ...++++++++||.+..+..         ..+.... .......+...+.+++++|+++++
T Consensus       146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT---------DNVNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh---------hcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            5 8899888764       34689999999987755421         1111111 111111222335679999999999


Q ss_pred             HHHhcCCcC
Q 023078          200 VQVLGNEKA  208 (287)
Q Consensus       200 ~~~~~~~~~  208 (287)
                      ..+++++..
T Consensus       217 ~~~~~~~~~  225 (256)
T PRK08017        217 RHALESPKP  225 (256)
T ss_pred             HHHHhCCCC
Confidence            999987653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=4.9e-13  Score=109.11  Aligned_cols=192  Identities=15%  Similarity=0.221  Sum_probs=126.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||..+++.|+++|++|++++|+..+.....     .+......++.++.+|+++.+++.++++.     ..+|+
T Consensus        11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217         11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV-----AECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865422111     11112235678899999998877766653     25899


Q ss_pred             EEEccCCCcc-----------------------------chH----HHHHhCC---CCCcEEEEeeeeEeecCCCCCCCC
Q 023078           76 VYDINGREAD-----------------------------EVE----PILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        76 vi~~a~~~~~-----------------------------~~~----~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e  119 (287)
                      |||++|....                             +..    .++..+.   ...+++++||...|+..       
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-------  158 (253)
T PRK08217         86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-------  158 (253)
T ss_pred             EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-------
Confidence            9999985211                             011    1112221   23468899987665421       


Q ss_pred             CCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       120 ~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                           +...| .+|.+.+.+.+       ..+++++.++|+.+.++.... ..+..........+.         ..+.+
T Consensus       159 -----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~  223 (253)
T PRK08217        159 -----GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV---------GRLGE  223 (253)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc---------CCCcC
Confidence                 12346 88988887653       358999999999998875321 122223333322211         23567


Q ss_pred             HHHHHHHHHHHhcCCcCCCceEEeeCCC
Q 023078          192 VKDLARAFVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~~~~~~~~~~~~~  219 (287)
                      ++|+|+++..++......|+++++.++.
T Consensus       224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        224 PEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            8999999999987655578899988764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=3.3e-13  Score=110.13  Aligned_cols=192  Identities=15%  Similarity=0.185  Sum_probs=123.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC------Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~------~~d   74 (287)
                      |||+|+||+++++.|+++|++|+++.++.....+.+.       .....++.++++|+.+++++.++++..      .+|
T Consensus        11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642         11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999887664332111110       111246788999999998888777632      289


Q ss_pred             EEEEccCCCc--------------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           75 VVYDINGREA--------------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        75 ~vi~~a~~~~--------------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                      ++||+++...                          .+...+++++    .  +..++|++||....           .+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~  152 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------NP  152 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------CC
Confidence            9999987420                          1123334442    2  45689999985431           11


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..|.+.| .+|...+.+.+       ..+++++.++||.+..+...............+..+         ...+.+.+|
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  223 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTP---------LRKVTTPQE  223 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCC---------cCCCCCHHH
Confidence            2233456 99999998764       247899999999886652111111122222222111         124788999


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +++++..++...  ...|+.+.+.++.
T Consensus       224 va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        224 FADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            999999998753  3367888887663

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.7e-13  Score=109.55  Aligned_cols=184  Identities=18%  Similarity=0.190  Sum_probs=119.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|++|+++++.|+++|++|++++|++.+..+...     .+.. ..++.++.+|+.+.+++.++++..     ++|+
T Consensus        12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326         12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA-----ELNN-KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHH-----HHhc-cCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998755221110     1111 146888999999998888777632     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      |||+++....                    +...++++    ++ +..++|++||...+..           ..+...| 
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~y~  154 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----------FAGGAAYN  154 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----------CCCCchHH
Confidence            9999876321                    12223333    22 4567999998764321           1122235 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       ..+++++.+||+.+.++....             .+    .  ......+..+|+++++..+
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------------~~----~--~~~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------------TP----S--EKDAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc-------------cc----c--hhhhccCCHHHHHHHHHHH
Confidence            78877665543       358999999999887763110             00    0  0001137789999999999


Q ss_pred             hcCCcC-CCceEEeeCCCc
Q 023078          203 LGNEKA-SRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~~-~~~~~~~~~~~~  220 (287)
                      +..+.. ......+..+.+
T Consensus       216 l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        216 LKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HhCCccccccceEEecCCC
Confidence            987543 344555554443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.2e-13  Score=110.03  Aligned_cols=191  Identities=17%  Similarity=0.187  Sum_probs=123.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|.++|++|++++|+....   .           ..++.++.+|+.|.+++.++++.     ..+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         15 TGGTKGIGAATVARLLEAGARVVTTARSRPDD---L-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             ECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---c-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986541   1           23578899999998877765542     16899


Q ss_pred             EEEccCCCc----------------------cch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |||++|...                      .+.    +.++..++  +..++|++||...+...          ..+..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~  150 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PESTT  150 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCcc
Confidence            999998421                      111    12233333  45689999997653211          11233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh----------HHHHHHHHcC-CCcccCCCCCceee
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EWFFHRLKAG-RPIPIPGSGIQVTQ  188 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~  188 (287)
                      .| .+|...+.+.+       ..+++++.++||.+.++.......          ......+... ..++       ...
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~  223 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-------LGR  223 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-------cCC
Confidence            46 88998887653       358999999999998874211000          0000000000 0010       112


Q ss_pred             eeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCccc
Q 023078          189 LGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~~s  222 (287)
                      +..++|+|+++..++...  ...|+.+.+.++...|
T Consensus       224 ~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        224 PAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            456899999999998753  3367888888876443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=4.2e-13  Score=109.75  Aligned_cols=190  Identities=17%  Similarity=0.199  Sum_probs=124.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|+++.++.....+.+.          ..++.++.+|++|++++.++++..     ++|+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463         13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----------EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----------hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988776543222221          125788999999998888877632     6899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +    ++.++..++  +..++|++||...++...          .....|
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~Y  152 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------EGTTFY  152 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------CCccHh
Confidence            9999986321                    1    233344443  456899999987653211          112346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                       .+|.+.+.+.+       ..+++++.++||.+-.+....    .....+........         ....+...+|+|+
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~  223 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT---------VLKTTGKPEDIAN  223 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---------CcCCCcCHHHHHH
Confidence             89998887653       358999999999885542110    00001111111111         1123467899999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++.++....  -.|..+.+.++.
T Consensus       224 ~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        224 IVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCe
Confidence            9999987543  367888887765

>PRK07069 short chain dehydrogenase; Validated

Probab=99.51  E-value=1.5e-13  Score=112.07  Aligned_cols=194  Identities=19%  Similarity=0.207  Sum_probs=120.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-c-CCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-S-SKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+... . ..+..+.+|+.+.+++.++++.     ..+
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA----AEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999997322111111    000000 1 1234578999999888777653     258


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||++|....                        .+..++++++  +.+++|++||...+....           ...
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----------~~~  149 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-----------DYT  149 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-----------CCc
Confidence            999999986321                        2344555554  567999999987654321           112


Q ss_pred             cc-cchHHHHHHHHh-------c--CCcEEEEccCceecCCCCCchh----HHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          128 RH-KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       128 ~~-~~k~~~E~~~~~-------~--~~~~~ilr~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      .| .+|...+.+.+.       .  +++++.++|+.+.++.......    ......+.++.         ....+.+++
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  220 (251)
T PRK07069        150 AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV---------PLGRLGEPD  220 (251)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC---------CCCCCcCHH
Confidence            35 888887776531       2  4888999999988874211100    00111111111         112345789


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      |++++++.++....  ..|+.+.+.++
T Consensus       221 ~va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        221 DVAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHHcCccccCccCCEEEECCC
Confidence            99999998776532  25566666544

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.51  E-value=6.7e-13  Score=108.55  Aligned_cols=194  Identities=13%  Similarity=0.125  Sum_probs=126.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+...... +.    ..+.....++.++.+|+++.+++.++++.     .++|+
T Consensus        17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~-~~----~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         17 TGAGAGIGKEIAITFATAGASVVVSDINADAANH-VV----DEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HH----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987654211 10    11111134677889999999888776653     26899


Q ss_pred             EEEccCCCc-------------------cchHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREA-------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~-------------------~~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+++...                   .+..++++++.      +..++|++||.....+           ..+...| 
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~  160 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------CCCcchhH
Confidence            999998521                   12333444431      3458999999764211           1122336 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|.+.+.+++       ..+++++.+.||.+..+.......+.+.....+..+         ...+..++|+++++..+
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l  231 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP---------IRRLGQPQDIANAALFL  231 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHH
Confidence            89999888763       357899999999887653221112222222222211         11346789999999998


Q ss_pred             hcCCc--CCCceEEeeCCC
Q 023078          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~  219 (287)
                      +....  ..|+.+++.++.
T Consensus       232 ~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        232 CSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             cCccccCccCCEEEECCCc
Confidence            87532  257888888774

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.2e-13  Score=112.59  Aligned_cols=168  Identities=18%  Similarity=0.134  Sum_probs=113.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||||.||+++++.|+++|++|++++|+++...+...         ...++.++.+|++|++++.++++.     ..+|+
T Consensus        11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825         11 TGGARGIGLATARALAALGARVAIGDLDEALAKETAA---------ELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---------HhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321110         012578899999999887666653     26899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +    .+.++..+.  +..++|++||...+...           .....|
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  150 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----------PGMATY  150 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----------CCCcch
Confidence            9999986321                    1    122333333  66789999998653211           112235


Q ss_pred             -cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.       +..++++++++|+.+-.+..             .+..      ......+++++|+|++++.
T Consensus       151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------------~~~~------~~~~~~~~~~~~va~~~~~  211 (273)
T PRK07825        151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI-------------AGTG------GAKGFKNVEPEDVAAAIVG  211 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh-------------cccc------cccCCCCCCHHHHHHHHHH
Confidence             8887766543       34689999999998755421             0000      0112356889999999999


Q ss_pred             HhcCCc
Q 023078          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++.++.
T Consensus       212 ~l~~~~  217 (273)
T PRK07825        212 TVAKPR  217 (273)
T ss_pred             HHhCCC
Confidence            998754

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.1e-13  Score=112.46  Aligned_cols=186  Identities=18%  Similarity=0.117  Sum_probs=120.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+......             ..+++++++|++|.+++.++++..     .+|+
T Consensus        10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179         10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998655211             246889999999999988888632     5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +..+++++    ++  +.+++|++||...+....           ....|
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y  145 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP-----------YMALY  145 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC-----------CccHH
Confidence            9999986321                    22233333    33  678999999976542211           12235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       .+|...+.+.+       +.++++++++||.+.++......     ...+. .... .......  .........+|+|
T Consensus       146 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~~~~~~va  221 (270)
T PRK06179        146 AASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYD-RERA-VVSKAVA--KAVKKADAPEVVA  221 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhH-HHHH-HHHHHHH--hccccCCCHHHHH
Confidence             88998887653       46899999999999887421110     00000 0000 0000000  0111235678999


Q ss_pred             HHHHHHhcCCcCCCceEEe
Q 023078          197 RAFVQVLGNEKASRQVFNI  215 (287)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~  215 (287)
                      +.++.++..+. ....|..
T Consensus       222 ~~~~~~~~~~~-~~~~~~~  239 (270)
T PRK06179        222 DTVVKAALGPW-PKMRYTA  239 (270)
T ss_pred             HHHHHHHcCCC-CCeeEec
Confidence            99999888654 2344543

>PLN02253 xanthoxin dehydrogenase

Probab=99.50  E-value=1.5e-13  Score=113.97  Aligned_cols=201  Identities=16%  Similarity=0.105  Sum_probs=124.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...     .+ ....++.++++|++|.+++.++++.     -++|+
T Consensus        24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD-----SL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----Hh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999987654211110     01 1124688999999999888877763     16899


Q ss_pred             EEEccCCCcc----------------------chHHHHHhCC------CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD----------------------EVEPILDALP------NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~----------------------~~~~l~~a~~------~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~  126 (287)
                      +||++|....                      +..++++++.      +..++|++||... ++..           . .
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~-~  165 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----------G-P  165 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-----------C-C
Confidence            9999986311                      1223333321      3357888888653 2211           1 1


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCc-eeeeeeH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQ-VTQLGHV  192 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~  192 (287)
                      ..| .+|...|.+.+       ..++++..++||.+..+......     ..........     ....... ....+++
T Consensus       166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~  240 (280)
T PLN02253        166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA-----FAGKNANLKGVELTV  240 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH-----HhhcCCCCcCCCCCH
Confidence            235 89999888763       24799999999998776311100     0001000000     0000000 0124679


Q ss_pred             HHHHHHHHHHhcCCc--CCCceEEeeCCCcccHH
Q 023078          193 KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s~~  224 (287)
                      +|+|+++..++....  ..|..+++.++...+..
T Consensus       241 ~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             HHHHHHHHhhcCcccccccCcEEEECCchhhccc
Confidence            999999999886533  25788888877544433

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=6.3e-13  Score=108.04  Aligned_cols=192  Identities=17%  Similarity=0.171  Sum_probs=122.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|+++ .|+........     ..+.....++.++.+|+++++++.++++..     .+|
T Consensus        11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565         11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL-----EEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999998 88755421111     011111346888999999999887776532     689


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +|||++|....                    +..++++++    .  +..++|++||...+....           ....
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------~~~~  154 (247)
T PRK05565         86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----------CEVL  154 (247)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----------CccH
Confidence            99999986421                    122233332    2  456799999976532211           1123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+++       ..+++++.++||.+..+..... ...........         .....+...+|+++++.
T Consensus       155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~va~~~~  224 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF-SEEDKEGLAEE---------IPLGRLGKPEEIAKVVL  224 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc-ChHHHHHHHhc---------CCCCCCCCHHHHHHHHH
Confidence            5 77776665542       4589999999999876532211 11111111110         01123568899999999


Q ss_pred             HHhcCCc--CCCceEEeeCC
Q 023078          201 QVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~  218 (287)
                      .++....  ..|+.+++.++
T Consensus       225 ~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        225 FLASDDASYITGQIITVDGG  244 (247)
T ss_pred             HHcCCccCCccCcEEEecCC
Confidence            9986633  25777777765

>PRK07985 oxidoreductase; Provisional

Probab=99.50  E-value=7.4e-13  Score=110.45  Aligned_cols=195  Identities=21%  Similarity=0.242  Sum_probs=124.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+++++.|+++|++|++..|+.... .+.+.    ........++.++.+|+++.+++.++++..     ++|
T Consensus        55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVK----KIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHH----HHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999887754321 11110    011111345778899999988777666531     589


Q ss_pred             EEEEccCCCc---------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      ++||++|...                     .++..+++++    +...++|++||...+.....           ...|
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~-----------~~~Y  199 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH-----------LLDY  199 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC-----------cchh
Confidence            9999998521                     1122334333    23358999999876532211           1235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... ..............+         ...+...+|+|+++.
T Consensus       200 ~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~r~~~pedva~~~~  270 (294)
T PRK07985        200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP---------MKRAGQPAELAPVYV  270 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC---------CCCCCCHHHHHHHHH
Confidence             89998887653       358999999999999884211 111111122222111         113456899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|..+.+.++.
T Consensus       271 fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        271 YLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             hhhChhcCCccccEEeeCCCe
Confidence            9987543  257788887764

>PRK08643 acetoin reductase; Validated

Probab=99.49  E-value=6.9e-13  Score=108.53  Aligned_cols=197  Identities=18%  Similarity=0.261  Sum_probs=122.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.....+..     .++.....++.++++|+++++.+.++++..     ++|+
T Consensus         8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA-----DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111111346788999999998887777632     5899


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                    +.    +.+++.++   ...++|++||...+.+..           ....
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~  151 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP-----------ELAV  151 (256)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------CCch
Confidence            9999986321                    11    12223322   235899999876432110           1233


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc--CCCcc-----cCCCCCceeeeeeHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIP-----IPGSGIQVTQLGHVK  193 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~i~~~  193 (287)
                      | .+|...+.+.+       ..|++++.++||.+..+..     ..+......  +.+..     +... .....+...+
T Consensus       152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  225 (256)
T PRK08643        152 YSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMM-----FDIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPE  225 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhh-----hHHHhhhccccCCCchHHHHHHhcc-CCCCCCcCHH
Confidence            5 88988776653       3589999999999877631     111110000  00000     0000 0011346789


Q ss_pred             HHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          194 DLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       194 Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      |+|.++..++...  ...|..+.+.++.
T Consensus       226 ~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        226 DVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            9999999988653  2367788877664

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.49  E-value=4.2e-13  Score=109.88  Aligned_cols=203  Identities=13%  Similarity=0.114  Sum_probs=120.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|+++.++.....+.... ....+.....++.++++|+++.+++.++++.     ..+|+
T Consensus        14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE-TVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH-HHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            79999999999999999999988887654321111110 0011111234678899999999988877763     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||++|...                    .+...+++++    +...++++++|.......           .....| .
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------~~~~~Y~~  161 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------PFYSAYAG  161 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------CCcccchh
Confidence            999998621                    1122233332    223466766433221110           011235 9


Q ss_pred             chHHHHHHHHh-------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~~-------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|.+.|.+.+.       .+++++.++||.+.++...+......   ........ ...+-....+.+++|+|+++..++
T Consensus       162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~  237 (257)
T PRK12744        162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA---VAYHKTAA-ALSPFSKTGLTDIEDIVPFIRFLV  237 (257)
T ss_pred             hHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch---hhcccccc-cccccccCCCCCHHHHHHHHHHhh
Confidence            99999987642       37999999999987763211100000   00000000 001111124778999999999999


Q ss_pred             cCCc-CCCceEEeeCCC
Q 023078          204 GNEK-ASRQVFNISGEK  219 (287)
Q Consensus       204 ~~~~-~~~~~~~~~~~~  219 (287)
                      .... ..|+++++.++.
T Consensus       238 ~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        238 TDGWWITGQTILINGGY  254 (257)
T ss_pred             cccceeecceEeecCCc
Confidence            8532 257889888764

>PRK12743 oxidoreductase; Provisional

Probab=99.49  E-value=1.5e-12  Score=106.47  Aligned_cols=194  Identities=14%  Similarity=0.108  Sum_probs=122.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|+++.++.....+.+.    ..+.....++.++.+|+++.+++..++++     ..+|+
T Consensus         8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988765443211111    11122235688999999998887776653     25899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC-------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~-------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                    +...+++++.       ...++|++||....           .+..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~~~~~  152 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLPGASA  152 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCCCcch
Confidence            9999986321                    1223333321       13589999986531           11122334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++..... ............+.         ..+.+.+|+++++.
T Consensus       153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  222 (256)
T PRK12743        153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGIPL---------GRPGDTHEIASLVA  222 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            5 88888877653       3579999999999988742111 11111111111111         12357899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|..+.+.++.
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHhCccccCcCCcEEEECCCc
Confidence            8886543  357788887764

>PRK06398 aldose dehydrogenase; Validated

Probab=99.49  E-value=8.1e-13  Score=108.23  Aligned_cols=186  Identities=15%  Similarity=0.159  Sum_probs=121.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+...                ..++.++.+|+++++++.++++..     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398         12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997644                135778999999998887777532     6899


Q ss_pred             EEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|...                    .+...+.++    ++  +..++|++||...+...           .+...|
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  144 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT-----------RNAAAY  144 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC-----------CCCchh
Confidence            999998631                    112223333    32  45789999998664321           122346


Q ss_pred             -cchHHHHHHHHh------cCCcEEEEccCceecCCCCCc-------hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                       .+|...+.+.+.      .+++++.++||.+-.+.....       ...........      +........+..++|+
T Consensus       145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~ev  218 (258)
T PRK06398        145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEV  218 (258)
T ss_pred             hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHH
Confidence             899998877642      248899999998865521000       00000000000      0000111235678999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      |++++.++....  ..|..+.+.++.
T Consensus       219 a~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        219 AYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHHcCcccCCCCCcEEEECCcc
Confidence            999999886532  367777777664

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.3e-12  Score=106.68  Aligned_cols=197  Identities=13%  Similarity=0.153  Sum_probs=123.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.+...+.+    ...+.....++.++.+|+.|++++.++++.     ..+|+
T Consensus        14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAET----AEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999764311111    011111234678899999999888877653     24799


Q ss_pred             EEEccCCCc--------------------cchHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|...                    .+...    ++..++  +..++|++||...+.....         .+...|
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~~~~Y  160 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------LLQAHY  160 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------CCcchH
Confidence            999998632                    11222    233333  4568999998764321110         012345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++.+++||.+.++..................+.         .-+..++|++++++.
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~  231 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAKVDEMVGPAVF  231 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88888776653       3589999999999987742211111111122221111         124568999999999


Q ss_pred             HhcCC--cCCCceEEeeCCC
Q 023078          202 VLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++...  ...|+++.+.++.
T Consensus       232 l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        232 LLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HcCccccCcCCceEEECcCE
Confidence            88653  2367788877653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.49  E-value=7.4e-13  Score=107.12  Aligned_cols=160  Identities=17%  Similarity=0.169  Sum_probs=112.9

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~   78 (287)
                      |||+|++|+++++.|+++|+ +|++++|+.++..+ .           ..++.++.+|+.+.+++.++++.. .+|+|||
T Consensus        12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264         12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-----------GPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-----------CCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999998 99999998765322 1           357889999999999988888743 4899999


Q ss_pred             ccCC-Cc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           79 INGR-EA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        79 ~a~~-~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +++. ..                    .+...+++++    .  +..++|++||...+.+.           .+...| .
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~~~y~~  148 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----------PNLGTYSA  148 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----------CCchHhHH
Confidence            9987 21                    1123334442    2  56789999997764321           122335 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...|.+.+       ..+++++++||+.+.++...             ..      .    ...+..+|+++.++..+
T Consensus       149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~~------~----~~~~~~~~~a~~~~~~~  205 (238)
T PRK08264        149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------------GL------D----APKASPADVARQILDAL  205 (238)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------------cC------C----cCCCCHHHHHHHHHHHH
Confidence            8888887653       24899999999988665210             00      0    01466788888888877


Q ss_pred             cCC
Q 023078          204 GNE  206 (287)
Q Consensus       204 ~~~  206 (287)
                      ...
T Consensus       206 ~~~  208 (238)
T PRK08264        206 EAG  208 (238)
T ss_pred             hCC
Confidence            753

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.7e-12  Score=107.05  Aligned_cols=180  Identities=13%  Similarity=0.123  Sum_probs=116.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.........     .+.....++.++.+|+.+.+++.++++.     ..+|+
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLK-----LLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655221111     1111234678899999998888777652     26899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +    ++.++..++  +..++|++||...+...           .....|
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y  149 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG-----------PAMSSY  149 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC-----------CCchHH
Confidence            9999986321                    1    122333343  56789999998654221           112345


Q ss_pred             -cchHHHHHHH----H---hcCCcEEEEccCceecCCCCCc--hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 -KGKLNTESVL----E---SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~----~---~~~~~~~ilr~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                       .+|...+.+.    .   ..++++++++||.+..+.....  ..+........          .....+++++|+|+.+
T Consensus       150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~vA~~i  219 (270)
T PRK05650        150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK----------LLEKSPITAADIADYI  219 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH----------HhhcCCCCHHHHHHHH
Confidence             8888766543    2   3589999999999987742110  00111100000          0012357899999999


Q ss_pred             HHHhcCC
Q 023078          200 VQVLGNE  206 (287)
Q Consensus       200 ~~~~~~~  206 (287)
                      +..+++.
T Consensus       220 ~~~l~~~  226 (270)
T PRK05650        220 YQQVAKG  226 (270)
T ss_pred             HHHHhCC
Confidence            9999864

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.48  E-value=5.3e-13  Score=108.21  Aligned_cols=175  Identities=14%  Similarity=0.116  Sum_probs=117.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.+|+.+++.|+++|++|++++|++++.....     ........++.++.+|+++.+++.++++.     .++|+
T Consensus        12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454         12 TGASSGIGKATALAFAKAGWDLALVARSQDALEALA-----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875422111     01111134688899999999888777653     25899


Q ss_pred             EEEccCCCcc--------------------chH----HHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +..    .++..+.  +..++|++||...+++..           +...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y  155 (241)
T PRK07454         87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP-----------QWGAY  155 (241)
T ss_pred             EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC-----------CccHH
Confidence            9999986211                    112    2233333  457899999987654221           12346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++|||.+-.+.....            . ..  .. .....++..+|+|++++.
T Consensus       156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~-~~--~~-~~~~~~~~~~~va~~~~~  219 (241)
T PRK07454        156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------T-VQ--AD-FDRSAMLSPEQVAQTILH  219 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------c-cc--cc-cccccCCCHHHHHHHHHH
Confidence             88888876642       3589999999998876631100            0 00  00 011235789999999999


Q ss_pred             HhcCCc
Q 023078          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       220 l~~~~~  225 (241)
T PRK07454        220 LAQLPP  225 (241)
T ss_pred             HHcCCc
Confidence            998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.1e-12  Score=107.43  Aligned_cols=193  Identities=16%  Similarity=0.184  Sum_probs=121.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..     ..+.....++.++.+|+++.+++.++++..     .+|+
T Consensus        15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR-----AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999866532111     111111346788999999998888877632     5899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--C--------CCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--N--------LEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~--------~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                      +||+++...                    .+...+++++    .  .        ..++|++||...+...         
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  160 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL---------  160 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC---------
Confidence            999998521                    1122222221    1  1        3589999987654211         


Q ss_pred             CCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                        .+...| .+|...+.+.+       ..++++++++||.++++.............+...  ++       ...+...+
T Consensus       161 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~p~  229 (258)
T PRK06949        161 --PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSM--LP-------RKRVGKPE  229 (258)
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhc--CC-------CCCCcCHH
Confidence              122345 78888777653       2579999999999998853211111111111111  11       11345579


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      |+++++..++....  ..|..+.+.++
T Consensus       230 ~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        230 DLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            99999999887432  25656655543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.48  E-value=1.2e-12  Score=106.51  Aligned_cols=191  Identities=15%  Similarity=0.152  Sum_probs=122.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|+.....       .........++.++++|+++.+++.++++.     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832        11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSET-------QQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHH-------HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998753210       011112234678999999999888876653     26999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                    +...+++++    .  + ..++|++||...+.+...           ...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----------~~~  152 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR-----------VPS  152 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC-----------Cch
Confidence            9999986321                    122233332    1  2 468999999876543211           123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       ..+++++.++||.+..+...... ...........  +       ....++.++|+|+++
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~  223 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--I-------PAGRWGTPDDIGGPA  223 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--C-------CCCCCcCHHHHHHHH
Confidence            5 88998887653       24899999999998777421100 00011111111  1       123678899999999


Q ss_pred             HHHhcCCc--CCCceEEeeCC
Q 023078          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~  218 (287)
                      ..++....  ..|.++.+.++
T Consensus       224 ~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       224 VFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHcCccccCcCCcEEEeCCC
Confidence            99987533  24666666554

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.47  E-value=7e-13  Score=107.44  Aligned_cols=167  Identities=19%  Similarity=0.162  Sum_probs=114.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|+||+++++.|+++|++|++++|++....+ +        .....++.++.+|+++.+++.++++..  .+|.++|
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~-~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-L--------HTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------HHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            7999999999999999999999999998654221 1        111246888999999999999988742  4688898


Q ss_pred             ccCCCc--------------------cchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchH
Q 023078           79 INGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~~~--------------------~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~  133 (287)
                      ++|...                    .+..++++++.    +..++|++||....-+           ......| .+|.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK~  146 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA-----------LPRAEAYGASKA  146 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC-----------CCCCchhhHHHH
Confidence            886421                    12333444432    3457898888653110           0112235 8999


Q ss_pred             HHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       134 ~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      ..+.+.+       ..+++++.++||.++++....             ...   ..    ...+..+|+|+.+...++..
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------------~~~---~~----~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK-------------NTF---AM----PMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------------CCC---CC----CcccCHHHHHHHHHHHHhcC
Confidence            8887753       468999999999998873211             000   00    12468999999999999875


Q ss_pred             c
Q 023078          207 K  207 (287)
Q Consensus       207 ~  207 (287)
                      .
T Consensus       207 ~  207 (240)
T PRK06101        207 K  207 (240)
T ss_pred             C
Confidence            3

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.47  E-value=1.8e-12  Score=105.88  Aligned_cols=194  Identities=15%  Similarity=0.153  Sum_probs=123.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     ..+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-----AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111     11111124567889999999888777653     25899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +...++++    +.  +..++|++||.....+           ..+...|
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  158 (254)
T PRK08085         90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----------RDTITPY  158 (254)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----------CCCCcch
Confidence            9999986311                    11222333    22  4578999998753211           1122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|.+.+.+.+       ..++++..++||.+..+...... ...+........+         ..-+...+|+++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~  229 (254)
T PRK08085        159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWGDPQELIGAAV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88998887763       35899999999999887421100 0111122222111         123567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  -.|+...+.++.
T Consensus       230 ~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        230 FLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHhCccccCCcCCEEEECCCe
Confidence            8887532  256777776653

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2.3e-12  Score=105.87  Aligned_cols=193  Identities=13%  Similarity=0.106  Sum_probs=121.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.++..+..     ..+.....++.++.+|+++++++.++++.     .++|+
T Consensus        16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVA-----EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     11111134678899999999988777653     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC-------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~-------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+++...                    .+..++.+++.       +..++|++||.....           ...+...
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  159 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGRGFAA  159 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCCCCch
Confidence            999998521                    12334444431       456899999864321           1112334


Q ss_pred             c-cchHHHHHHHHh------cCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|..++.+.+.      .+++++.++||.+..+...... ...+...+....         ....+...+|+|++++
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~  230 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKAT---------PLRRLGDPEDIAAAAV  230 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence            6 899998887642      2578889999887655211000 001111111111         1122457899999999


Q ss_pred             HHhcCC--cCCCceEEeeCC
Q 023078          201 QVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~  218 (287)
                      .++...  ...+..+.+.++
T Consensus       231 ~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        231 YLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             HHcCccccCcCCCEEEECCC
Confidence            988653  225666776554

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.46  E-value=2e-12  Score=105.74  Aligned_cols=194  Identities=15%  Similarity=0.184  Sum_probs=125.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++....+..     .++.....++.++.+|+++++++.++++..     .+|+
T Consensus        17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV-----AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111     112222346889999999998887776531     5799


Q ss_pred             EEEccCCCcc--------------------chHHHH----HhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~----~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+++....                    +...+.    +.+.  +..++|++||...+....           ....|
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------~~~~Y  160 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA-----------GDAVY  160 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC-----------CccHh
Confidence            9999986321                    112222    3332  567899999976432111           11235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|.+.+.+.+       ..+++++.++||.+.++...... ...+...+....+         ...+++++|++++++
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~  231 (256)
T PRK06124        161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTP---------LGRWGRPEEIAGAAV  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence             77887776543       24899999999999887421111 1111112222111         123688999999999


Q ss_pred             HHhcCCcC--CCceEEeeCCC
Q 023078          201 QVLGNEKA--SRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~~--~~~~~~~~~~~  219 (287)
                      .++.....  .|+.+.+.++.
T Consensus       232 ~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        232 FLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHcCcccCCcCCCEEEECCCc
Confidence            99976532  56777776554

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.46  E-value=9.8e-13  Score=111.57  Aligned_cols=185  Identities=16%  Similarity=0.166  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|++....+..     .+......++.++.+|++|.+++.++++..     .+|+
T Consensus        14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~-----~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEALA-----AEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865422111     112222356788999999998888776531     6899


Q ss_pred             EEEccCCCcc------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+++....                        .++.++..++  +..++|++||...+....           ....|
T Consensus        89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y  157 (334)
T PRK07109         89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP-----------LQSAY  157 (334)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC-----------cchHH
Confidence            9999986321                        1233444443  457899999987753211           12335


Q ss_pred             -cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                       .+|...+.+.+         ..++.+++++|+.+..|.     ..+. ......       .......+...+|+|+++
T Consensus       158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~-----~~~~-~~~~~~-------~~~~~~~~~~pe~vA~~i  224 (334)
T PRK07109        158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ-----FDWA-RSRLPV-------EPQPVPPIYQPEVVADAI  224 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch-----hhhh-hhhccc-------cccCCCCCCCHHHHHHHH
Confidence             88887766542         146899999999887662     1111 000000       011122456899999999


Q ss_pred             HHHhcCCcCCCceEEeeC
Q 023078          200 VQVLGNEKASRQVFNISG  217 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~  217 (287)
                      +.++.++.   ..+.+++
T Consensus       225 ~~~~~~~~---~~~~vg~  239 (334)
T PRK07109        225 LYAAEHPR---RELWVGG  239 (334)
T ss_pred             HHHHhCCC---cEEEeCc
Confidence            99998753   3455554

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.46  E-value=9.2e-13  Score=108.11  Aligned_cols=192  Identities=14%  Similarity=0.212  Sum_probs=121.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..        .....++.++.+|+.+.+++.++++..     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265         12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVA--------ASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111        111246888999999998888777632     6899


Q ss_pred             EEEccCCCcc-------------------chHHH----HHhC-CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD-------------------EVEPI----LDAL-PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l----~~a~-~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||++|....                   +...+    +..+ ++..++|++||........           ....| .
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~Y~a  152 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------GRWLYPA  152 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CCchhHH
Confidence            9999985311                   11122    2223 2346899999876431111           12235 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      +|...+.+.+       ..+++++.++||.+..+......  ..........  ..    .  ...-+...+|+|+++..
T Consensus       153 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~--~~----~--p~~r~~~p~dva~~~~~  224 (261)
T PRK08265        153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA--PF----H--LLGRVGDPEEVAQVVAF  224 (261)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc--cc----C--CCCCccCHHHHHHHHHH
Confidence            8888877653       25899999999987665210000  0000000000  00    0  01124578999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|..+.+.++.
T Consensus       225 l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        225 LCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HcCccccCccCcEEEECCCe
Confidence            987532  367788887764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.46  E-value=1.8e-12  Score=107.42  Aligned_cols=194  Identities=13%  Similarity=0.192  Sum_probs=124.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+........     ..+.....++.++.+|+.+.+++..+++.     ..+|+
T Consensus        16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV-----AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     11111124578899999998887776653     26899


Q ss_pred             EEEccCCCcc-----------------------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCC
Q 023078           76 VYDINGREAD-----------------------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDL  114 (287)
Q Consensus        76 vi~~a~~~~~-----------------------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~  114 (287)
                      +||+++....                                   +.    +.+++.+.  +..++|++||...+...  
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--  168 (278)
T PRK08277         91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL--  168 (278)
T ss_pred             EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC--
Confidence            9999984210                                   01    12233333  45789999998765321  


Q ss_pred             CCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh------HHHHHHHHcCCCcccC
Q 023078          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE------EWFFHRLKAGRPIPIP  180 (287)
Q Consensus       115 ~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~------~~~~~~~~~~~~~~~~  180 (287)
                               .+...| .+|...+.+.+       ..++++..++||.+..+.......      ......+....     
T Consensus       169 ---------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----  234 (278)
T PRK08277        169 ---------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT-----  234 (278)
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC-----
Confidence                     122335 88998887763       347999999999998874211000      00111111111     


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcC-Cc--CCCceEEeeCCC
Q 023078          181 GSGIQVTQLGHVKDLARAFVQVLGN-EK--ASRQVFNISGEK  219 (287)
Q Consensus       181 ~~~~~~~~~i~~~Dva~~~~~~~~~-~~--~~~~~~~~~~~~  219 (287)
                          ...-+...+|+|++++.++.. ..  ..|..+.+.++.
T Consensus       235 ----p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        235 ----PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             ----CccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence                112356689999999998875 32  367778877663

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.46  E-value=3.4e-12  Score=104.34  Aligned_cols=195  Identities=15%  Similarity=0.213  Sum_probs=124.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|++++.....     .++.....++.++.+|+.+.+++.++++..     .+|+
T Consensus        12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478         12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-----AEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999866532111     111222346788999999998887776532     6899


Q ss_pred             EEEccCCCcc-------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                         ..+.++..++  +..++|++||...+...          ......
T Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------~~~~~~  156 (254)
T PRK07478         87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG----------FPGMAA  156 (254)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC----------CCCcch
Confidence            9999986310                         0122333443  45689999997654211          111234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|.+.+.+.+       ..++.++.++||.+-.+..... ........+....+         ...+...+|+|+++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  227 (254)
T PRK07478        157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQPEEIAQAA  227 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            6 89998887653       3479999999999866621100 00111111111111         12346789999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +.++....  ..|+.+.+.++.
T Consensus       228 ~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        228 LFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHcCchhcCCCCCeEEeCCch
Confidence            99887543  257777776653

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.46  E-value=3e-12  Score=104.51  Aligned_cols=195  Identities=17%  Similarity=0.229  Sum_probs=119.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecC-CccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------   70 (287)
                      |||+|+||.++++.|+++|++|.+..++ .....+ ..    .++......+..+.+|+.+.+++..+++.         
T Consensus        10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747         10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEE-TV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHH-HH----HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            7999999999999999999999887543 332111 10    11111123566788999987666544431         


Q ss_pred             --CCccEEEEccCCCcc--------------------chHHHH----HhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           71 --KGFDVVYDINGREAD--------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~~~~l~----~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                        ..+|++||++|....                    +...++    ..++...++|++||...+...           .
T Consensus        85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  153 (252)
T PRK12747         85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----------P  153 (252)
T ss_pred             CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-----------C
Confidence              169999999986321                    122222    223334689999998764221           1


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|...+.+.+       ..++++..+.||.+.++.................  .      .....+.+++|+|
T Consensus       154 ~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~dva  225 (252)
T PRK12747        154 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATT--I------SAFNRLGEVEDIA  225 (252)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHh--c------CcccCCCCHHHHH
Confidence            12346 99999887763       3589999999999988742110000001111110  0      0112467899999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++..++....  ..|..+.+.++.
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        226 DTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHHcCccccCcCCcEEEecCCc
Confidence            99998886532  357778777653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.46  E-value=3.7e-12  Score=103.68  Aligned_cols=194  Identities=17%  Similarity=0.160  Sum_probs=117.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+.+++.|+++|++|+++.++.....+...    ........++.++.+|+.+.+++.++++.     ..+|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETA----DAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999877654322111110    11111234688999999999887776653     25899


Q ss_pred             EEEccCCCcc---------------------chHHHHHh-CC-----C---CCcEEEEeeeeEe-ecCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD---------------------EVEPILDA-LP-----N---LEQFIYCSSAGVY-LKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a-~~-----~---~~~~i~~Ss~~~y-~~~~~~~~~e~~~~~  124 (287)
                      +||++|....                     +...++++ +.     +   ..++|++||...+ +...           
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-----------  152 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN-----------  152 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-----------
Confidence            9999985311                     11222222 11     1   2359999987542 2110           


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|...+.+.+       ..++++++++||.+..+.....-.+..........+.         .-...++|++
T Consensus       153 ~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~e~va  223 (248)
T PRK06947        153 EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL---------GRAGEADEVA  223 (248)
T ss_pred             CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCC---------CCCcCHHHHH
Confidence            11235 88988876542       3479999999999988742110011111111111110         1135689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +.++.++....  ..|..+.+.++
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        224 ETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHcCccccCcCCceEeeCCC
Confidence            99999887643  35666666543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=3.8e-12  Score=102.75  Aligned_cols=183  Identities=15%  Similarity=0.163  Sum_probs=118.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+....   .           ..++.++.+|++++ +.+.+.+.  .+|++||+
T Consensus        11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~   74 (235)
T PRK06550         11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---L-----------SGNFHFLQLDLSDDLEPLFDWVP--SVDILCNT   74 (235)
T ss_pred             cCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---c-----------CCcEEEEECChHHHHHHHHHhhC--CCCEEEEC
Confidence            79999999999999999999999999975431   1           24577889999887 44444444  78999999


Q ss_pred             cCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           80 NGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        80 a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      +|...                     .+..++++++    .  +..++|++||...+....           ....| .+
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~~s  143 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG-----------GGAAYTAS  143 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-----------CCcccHHH
Confidence            98421                     1122333332    2  446899999976532111           11235 78


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      |...+.+.+       ..+++++.++||.+.++.....+. ..+.....+..+         ...+...+|+|++++.++
T Consensus       144 K~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~  214 (235)
T PRK06550        144 KHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLA  214 (235)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHc
Confidence            887776542       358999999999998874322111 112222222211         123577899999999998


Q ss_pred             cCC--cCCCceEEeeCCC
Q 023078          204 GNE--KASRQVFNISGEK  219 (287)
Q Consensus       204 ~~~--~~~~~~~~~~~~~  219 (287)
                      ...  ...+..+.+.++.
T Consensus       215 s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        215 SGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             ChhhccCCCcEEEECCce
Confidence            653  2356777776653

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.45  E-value=3.9e-12  Score=103.81  Aligned_cols=188  Identities=17%  Similarity=0.107  Sum_probs=123.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+....   ..          ..++.++.+|+.+.+++.++++..     .+|+
T Consensus        12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856         12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VD----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hc----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986441   11          246788999999998888777532     5799


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||++|....                    +...+++++    .   +..++|++||...+...           .....
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~~  147 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----------PGTAA  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----------CCCch
Confidence            9999985321                    122333332    1   24689999997653211           11234


Q ss_pred             c-cchHHHHHHHHh------cCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+.      ..+.++.++||.+..+...... .......+....+         ...+..++|+|++++
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~va~~~~  218 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATPADIAWACL  218 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCHHHHHHHHH
Confidence            6 889998887642      2378899999988766311100 0011111111111         112457899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCcc
Q 023078          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      .++....  ..|..+.+.++...
T Consensus       219 ~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        219 FLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             HHcCcccCCccCCEEEECCCcch
Confidence            9886532  36788888877653

>PRK12742 oxidoreductase; Provisional

Probab=99.45  E-value=6.3e-12  Score=101.59  Aligned_cols=188  Identities=18%  Similarity=0.196  Sum_probs=119.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|.||+++++.|+++|++|+++.|+.....+.+.        . ..++.++.+|++|.+++.+.++.. .+|++||+
T Consensus        12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~--------~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742         12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA--------Q-ETGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH--------H-HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            7999999999999999999999888765332111111        0 124677889999988888777643 48999999


Q ss_pred             cCCCcc--------------------chHHHH----HhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           80 NGREAD--------------------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        80 a~~~~~--------------------~~~~l~----~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      +|....                    +...++    ..++...++|++||.....          .+..+...| .+|..
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCCcchHHhHHH
Confidence            986321                    111122    2222456899999865310          111223346 89999


Q ss_pred             HHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       135 ~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      .+.+.+       ..+++++.++||.+..+..... . ..........+         ...+...+|+++++..++....
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~-~~~~~~~~~~~---------~~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-G-PMKDMMHSFMA---------IKRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-c-HHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCccc
Confidence            887763       3579999999999877642111 0 11111111111         1124678999999999886533


Q ss_pred             --CCCceEEeeCC
Q 023078          208 --ASRQVFNISGE  218 (287)
Q Consensus       208 --~~~~~~~~~~~  218 (287)
                        ..|..+.+.++
T Consensus       222 ~~~~G~~~~~dgg  234 (237)
T PRK12742        222 SFVTGAMHTIDGA  234 (237)
T ss_pred             CcccCCEEEeCCC
Confidence              25667776654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.3e-12  Score=106.93  Aligned_cols=170  Identities=16%  Similarity=0.192  Sum_probs=114.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...     .... ..++.++.+|+++.+++.++++.     -.+|+
T Consensus         8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAA-----RLPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998655221110     0000 11678899999999888777653     13799


Q ss_pred             EEEccCCCcc---------------------chHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD---------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                     +...    ++.+++  +..++|++||...+.+.           .....
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  150 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL-----------PGAGA  150 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CCCcc
Confidence            9999985311                     1222    233443  55789999987643211           11223


Q ss_pred             c-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.       +..+++++.++||.+.++...            .. ..   ..    ..++..+++++.++
T Consensus       151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------------~~-~~---~~----~~~~~~~~~a~~~~  210 (257)
T PRK07024        151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA------------HN-PY---PM----PFLMDADRFAARAA  210 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh------------cC-CC---CC----CCccCHHHHHHHHH
Confidence            5 8999888775       245899999999999877310            00 00   00    11367999999999


Q ss_pred             HHhcCCc
Q 023078          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      .++.+..
T Consensus       211 ~~l~~~~  217 (257)
T PRK07024        211 RAIARGR  217 (257)
T ss_pred             HHHhCCC
Confidence            9998643

>PRK09242 tropinone reductase; Provisional

Probab=99.45  E-value=4.7e-12  Score=103.66  Aligned_cols=193  Identities=18%  Similarity=0.266  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||+++++.|.++|++|++++|+.+...+..     ..+...  ..++.++.+|+.+.+++.++++.     .++
T Consensus        15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQAR-----DELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865422111     111111  24678889999998877666653     268


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |+|||++|....                    +...++++    ++  +..++|++||...+...           .+..
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~  158 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----------RSGA  158 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------CCCc
Confidence            999999986311                    22233333    22  45789999998654321           1223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .| .+|...+.+.+       ..+++++.++||.+.++...... ...+........+.         .-+...+|++.+
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  229 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAA  229 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            45 88888877653       35899999999999887422111 11122222222111         123457999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +..++....  ..|+.+.+.++
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            998886532  25677777655

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.45  E-value=1.3e-12  Score=99.91  Aligned_cols=185  Identities=19%  Similarity=0.265  Sum_probs=129.1

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+.||.|+++++.....++.|..+.|+..+.-          +..+...+.++.+|....+.+...+.  ++..++.+++
T Consensus        59 ggnpfsgs~vlk~A~~vv~svgilsen~~k~~----------l~sw~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~g  126 (283)
T KOG4288|consen   59 GGNPFSGSEVLKNATNVVHSVGILSENENKQT----------LSSWPTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMMG  126 (283)
T ss_pred             cCCCcchHHHHHHHHhhceeeeEeecccCcch----------hhCCCcccchhhccccccCcchhhhc--CCcccHHHhc
Confidence            88999999999999999999999999876521          12224678899999988777777777  8888888776


Q ss_pred             C----------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHH-HhcCCcEEE
Q 023078           82 R----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTS  148 (287)
Q Consensus        82 ~----------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~-~~~~~~~~i  148 (287)
                      .          |.....+..+++.  ++++|+|+|... ||-         .+..|.+|+.+|+++|.-+ ..++.+-++
T Consensus       127 gfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~---------~~~i~rGY~~gKR~AE~Ell~~~~~rgii  196 (283)
T KOG4288|consen  127 GFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL---------PPLIPRGYIEGKREAEAELLKKFRFRGII  196 (283)
T ss_pred             CccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC---------CCccchhhhccchHHHHHHHHhcCCCcee
Confidence            4          2223444455544  999999999643 211         2334566779999999765 567899999


Q ss_pred             EccCceecCCCCCch---h---HHHHHHHHcCC--Cc-ccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          149 LRPVYIYGPLNYNPV---E---EWFFHRLKAGR--PI-PIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       149 lr~~~v~g~~~~~~~---~---~~~~~~~~~~~--~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      +|||.+||-......   +   ...+.+..+.-  ++ .++--+....+.+.++++|.+.+.+++++..
T Consensus       197 lRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f  265 (283)
T KOG4288|consen  197 LRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDF  265 (283)
T ss_pred             eccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCc
Confidence            999999997432211   1   11122222211  11 1222345677899999999999999998753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.45  E-value=5.7e-12  Score=102.44  Aligned_cols=193  Identities=19%  Similarity=0.254  Sum_probs=120.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.+.........    ..+.......+..+.+|+.|.+++.+++++     .++|+
T Consensus         9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKW----LEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999988654322211000    011111234577789999999888777653     26899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+++....                    +    ++.+++.+.  +..++|++||.....+           ......|
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~y  153 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTNY  153 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----------CCCChhH
Confidence            9999986321                    1    222333333  5578999998653211           1122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+.++.... ..+.....+....+         ...+...+|+++++..
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~  223 (246)
T PRK12938        154 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAW  223 (246)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHHH
Confidence             88887776542       358999999999988774211 11222222222211         1234568999999998


Q ss_pred             HhcCC--cCCCceEEeeCC
Q 023078          202 VLGNE--KASRQVFNISGE  218 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~  218 (287)
                      ++...  ...++.+.+.++
T Consensus       224 l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        224 LASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HcCcccCCccCcEEEECCc
Confidence            88653  236777877665

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.44  E-value=2.9e-12  Score=104.01  Aligned_cols=189  Identities=17%  Similarity=0.213  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|+.|++..|+..+.....        .....+++++.+|+++.+++.++++.     .++|+
T Consensus        12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936         12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA--------AELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999988888765422111        01124678899999999888776542     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC------CCCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL------PNLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~------~~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+++....                    +..++++++      ++..++|++||... ++...            ...
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~  151 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG------------QAN  151 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC------------Ccc
Confidence            9999986321                    222333332      15578999999754 32111            122


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.++|+.+..+.... ............  .       ....+...+|+++++.
T Consensus       152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~--~-------~~~~~~~~~~ia~~~~  221 (245)
T PRK12936        152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQKEAIMGA--I-------PMKRMGTGAEVASAVA  221 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHHHHHHhcC--C-------CCCCCcCHHHHHHHHH
Confidence            5 77776655442       357999999999876553211 111111111111  1       1122556899999998


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+++.++.
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        222 YLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHcCccccCcCCCEEEECCCc
Confidence            8886532  257889988764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.44  E-value=3.8e-12  Score=104.29  Aligned_cols=193  Identities=13%  Similarity=0.148  Sum_probs=123.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||..+++.|+++|++|++++|+. ... .+.    ........++.++.+|+.+.+++.++++..     .+|+
T Consensus        21 tGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~-~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         21 TGGNTGLGQGYAVALAKAGADIIITTHGT-NWD-ETR----RLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHH-HHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999973 211 110    111122356889999999998887777632     6899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +    ++.++..++  +..++|++||...+.+..           ....|
T Consensus        95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  163 (258)
T PRK06935         95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK-----------FVPAY  163 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----------Cchhh
Confidence            9999986311                    1    122233332  457899999987643221           11235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|.+.+.+.+       ..+++++.++||.+..+..... ............  +       ...-+...+|++.++.
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~  234 (258)
T PRK06935        164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--I-------PAGRWGEPDDLMGAAV  234 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--C-------CCCCCCCHHHHHHHHH
Confidence             88998887753       3589999999999877632100 000111111111  1       1123677899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  -.|+++.+.++.
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        235 FLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHcChhhcCCCCCEEEECCCe
Confidence            8886532  367788877663

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.2e-12  Score=105.77  Aligned_cols=195  Identities=17%  Similarity=0.165  Sum_probs=123.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||+++++.|+++|++|++++|+++...+..     ..+..  ...++.++.+|+++++++.++++.     ..+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063         13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAA-----AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999765422111     01111  134678899999999888877753     268


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||++|....                    +...+.++    +.  +..++|++||...+...           ....
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  156 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----------PGCF  156 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----------CCch
Confidence            999999986311                    12222233    22  45689999997643211           1122


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .| .+|.+.+.+.+       ..++++..++||.+-.+.....+     ............+         ..-+...+|
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~  227 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP---------MKRIGRPEE  227 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC---------CCCCCCHHH
Confidence            36 88998887763       35799999999988655211000     0000111111111         112456899


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +|.+++.++....  ..|+.+.+.++..
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECCCee
Confidence            9999999887532  3677788876654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.44  E-value=4.5e-12  Score=102.76  Aligned_cols=194  Identities=20%  Similarity=0.262  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.|+.......+.    ........++.++.+|+.+++++.++++.     ..+|.
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999984322111110    01111134688999999998887776652     25899


Q ss_pred             EEEccCCCc--------------------cchHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|...                    .+...    ++..++  +..++|++||.....+.           .....|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y  150 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----------FGQTNY  150 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCcchh
Confidence            999998531                    11112    333333  56789999986532111           112235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++|+.+.++... ...+.+........+.         ..+...+|+++++..
T Consensus       151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  220 (242)
T TIGR01829       151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM-AMREDVLNSIVAQIPV---------GRLGRPEEIAAAVAF  220 (242)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-ccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             78876665542       35899999999999887421 1122222222222211         123457899999987


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++..+.  ..|+.+.+.++.
T Consensus       221 l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       221 LASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HcCchhcCccCCEEEecCCc
Confidence            776532  357788887763

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.43  E-value=9.9e-12  Score=100.42  Aligned_cols=186  Identities=14%  Similarity=0.100  Sum_probs=119.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|++....+.+        .  ..++.++.+|+.+.+++.++++..     .+|+
T Consensus         8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGL--------R--QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--------H--HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            799999999999999999999999999865422111        1  134778999999988877766532     4899


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--C--CCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~--~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||++|....                    +.    +.++..++  +  ..++|++||......           .....
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~  146 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----------SDKHI  146 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----------CCCCc
Confidence            9999985211                    11    12223332  2  357999988653211           01122


Q ss_pred             cc-cchHHHHHHHHh------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          128 RH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       128 ~~-~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .| .+|...+.+.+.      .++++..++||.+..+....   ...........++.         -+...+|+++++.
T Consensus       147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~  214 (236)
T PRK06483        147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVD  214 (236)
T ss_pred             cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHH
Confidence            36 999999887642      25899999999875432111   11111222221111         1235799999999


Q ss_pred             HHhcCCcCCCceEEeeCCC
Q 023078          201 QVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~  219 (287)
                      .++......|+.+.+.++.
T Consensus       215 ~l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        215 YLLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HHhcCCCcCCcEEEeCccc
Confidence            9987555577888887664

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.9e-12  Score=105.04  Aligned_cols=194  Identities=13%  Similarity=0.153  Sum_probs=125.7

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+.+++.|+++|++ |++++|+..+.....     ..+......+.++.+|+++++++.++++..     ++|
T Consensus        12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198         12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-----AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999998 999999765422110     011112346778899999998888877532     589


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      .+||+++....                    +..++++++    .   ...++|++||...++...           ...
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----------~~~  155 (260)
T PRK06198         87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP-----------FLA  155 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----------Ccc
Confidence            99999986321                    122333332    2   235799999987754321           122


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC---c---hhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---P---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      .| .+|...|.+.+       ..+++++.++|+.++++....   .   ....+........         ....+++++
T Consensus       156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  226 (260)
T PRK06198        156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPD  226 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHH
Confidence            35 88998887764       246899999999998874211   0   0011111111111         123467899


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      |+++++..++....  ..|+.+.+.++.
T Consensus       227 ~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        227 EVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHHHcChhhCCccCceEeECCcc
Confidence            99999999886543  367788876653

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.43  E-value=4.7e-12  Score=103.32  Aligned_cols=193  Identities=13%  Similarity=0.122  Sum_probs=123.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+........     ..+......+.++++|+.+.+++.++++..     .+|+
T Consensus        14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA-----DAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765422111     111112245778899999988877766531     5899


Q ss_pred             EEEccCCCc---------------------cchHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA---------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+++...                     .+...    +++.++  +..+++++||...+..           ..+.+.
T Consensus        89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~  157 (252)
T PRK07035         89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GDFQGI  157 (252)
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CCCCcc
Confidence            999998521                     01222    233333  5578999998654211           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       ..+++++.+.||.+..+...... ............+         ...+...+|+|+++
T Consensus       158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  228 (252)
T PRK07035        158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAV  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHH
Confidence            6 99999988764       34899999999988665311100 0111112221111         12355789999999


Q ss_pred             HHHhcCCc--CCCceEEeeCC
Q 023078          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~  218 (287)
                      ..++.+..  ..|+.+.+.++
T Consensus       229 ~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            99887643  25777777654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.43  E-value=4e-12  Score=103.81  Aligned_cols=194  Identities=17%  Similarity=0.170  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|+.+...+..     ..+.....++.++.+|+++.+++.++++..     .+|+
T Consensus        13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172         13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV-----ALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876522111     111222356888999999998888776532     5799


Q ss_pred             EEEccCCCcc---------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||++|....                     +.    +.++..+.  +..++|++||...+.+..           ....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~~~~  156 (253)
T PRK06172         88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------KMSI  156 (253)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CCch
Confidence            9999986311                     01    11222222  456899999987653221           1234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+       ..++++..+.||.+-.+......  ............+         ..-+...+|+++.
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~ia~~  227 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP---------VGRIGKVEEVASA  227 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC---------CCCccCHHHHHHH
Confidence            6 88998887653       24799999999988655311100  0111111111111         1124678999999


Q ss_pred             HHHHhcCC--cCCCceEEeeCCC
Q 023078          199 FVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +..++...  ...|+.+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        228 VLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHhCccccCcCCcEEEECCCc
Confidence            99998753  3367788887764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.43  E-value=1.1e-11  Score=101.98  Aligned_cols=194  Identities=16%  Similarity=0.174  Sum_probs=124.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|+++|++|+++.|+..+..+..     ..+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988865532111     11222234688899999999988887763     25899


Q ss_pred             EEEccCCCcc--------------------chH----HHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +..    .++..++  +..++|++||......           ..+...|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  159 (265)
T PRK07097         91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG-----------RETVSAY  159 (265)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC-----------CCCCccH
Confidence            9999987321                    111    2233333  5678999998643110           1122345


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-------hHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                       .+|...+.+.+       ..+++++.++||.+..+......       ...+...+....+         ...+...+|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  230 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPED  230 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHH
Confidence             88988887763       35899999999999887421100       0001111111111         113566899


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +|..+..++...  ...|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        231 LAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999998763  2356777776654

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.8e-12  Score=104.87  Aligned_cols=191  Identities=18%  Similarity=0.187  Sum_probs=118.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.........          ..+..++.+|+++++++.++++.     .++|+
T Consensus        13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057         13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD----------EVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----------HcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654221110          11235789999999888887763     25899


Q ss_pred             EEEccCCCcc----------------------ch----HHHHHhCC--CCCcEEEEeeee-EeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD----------------------EV----EPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~----------------------~~----~~l~~a~~--~~~~~i~~Ss~~-~y~~~~~~~~~e~~~~~p~  126 (287)
                      |||++|....                      +.    ..++..++  +..++|++||.. +++..           .+.
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-----------~~~  151 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-----------TSQ  151 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-----------CCC
Confidence            9999985311                      01    11222222  446889888854 44321           112


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|...+.+.+       ..+++++.++||.+.++.....+.. ......+ ....++     ...+..++|++++
T Consensus       152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~-----~~~~~~~~~~a~~  224 (255)
T PRK06057        152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-DPERAAR-RLVHVP-----MGRFAEPEEIAAA  224 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-CHHHHHH-HHhcCC-----CCCCcCHHHHHHH
Confidence            235 88876555432       3589999999999988742111100 0001000 000111     1246889999999


Q ss_pred             HHHHhcCC--cCCCceEEeeCCC
Q 023078          199 FVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +..++...  ...+..+.+.++.
T Consensus       225 ~~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        225 VAFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHHHhCccccCccCcEEEECCCe
Confidence            98877653  2356777776553

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.42  E-value=2.4e-12  Score=104.44  Aligned_cols=170  Identities=15%  Similarity=0.143  Sum_probs=113.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccC--CccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi   77 (287)
                      |||+|+||.++++.|+++|++|++++|++++......     .. .....+++++++|+.+.+++.++++..  .+|.+|
T Consensus         7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          7 IGATSDIARACARRYAAAGARLYLAARDVERLERLAD-----DLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-----HHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            7999999999999999999999999998765321110     01 111347889999999998888877632  479999


Q ss_pred             EccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           78 DINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        78 ~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      |++|...                    .+...++++    +.  +..+++++||.......           .....| .
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~  150 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----------ASNYVYGS  150 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----------CCCcccHH
Confidence            9987521                    112223333    22  56789999987532110           011235 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+.+       +.+++++.++|+.+.++...             +.  ..+     ....+.++|+++.+...+
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-------------~~--~~~-----~~~~~~~~~~a~~i~~~~  210 (243)
T PRK07102        151 AKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-------------GL--KLP-----GPLTAQPEEVAKDIFRAI  210 (243)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh-------------cc--CCC-----ccccCCHHHHHHHHHHHH
Confidence            8888776653       45899999999998876210             00  000     012467899999999998


Q ss_pred             cCC
Q 023078          204 GNE  206 (287)
Q Consensus       204 ~~~  206 (287)
                      +++
T Consensus       211 ~~~  213 (243)
T PRK07102        211 EKG  213 (243)
T ss_pred             hCC
Confidence            864

>TIGR02415 23BDH acetoin reductases

Probab=99.42  E-value=2.1e-12  Score=105.49  Aligned_cols=197  Identities=20%  Similarity=0.191  Sum_probs=120.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||.++++.|+++|++|+++.|++....+..     ..+.....++.++.+|++|++++.++++..     .+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999854422111     111222346788999999999888776532     5799


Q ss_pred             EEEccCCCcc--------------------chH----HHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVE----PILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~----~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+++....                    +..    .++..++  + ..++|++||.....+.           ...+.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----------PILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----------CCCcc
Confidence            9999986321                    111    2223322  2 3689999986542111           11234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCccc------CCCCCceeeeeeHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI------PGSGIQVTQLGHVKD  194 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~D  194 (287)
                      | .+|...+.+.+       ..++.+++++||.+..+..     ..+............      +........+.+++|
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW-----EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPED  224 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh-----hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHH
Confidence            5 88988887763       2478999999998865521     111110000000000      000001123678899


Q ss_pred             HHHHHHHHhcCCcC--CCceEEeeCC
Q 023078          195 LARAFVQVLGNEKA--SRQVFNISGE  218 (287)
Q Consensus       195 va~~~~~~~~~~~~--~~~~~~~~~~  218 (287)
                      +++++..++.....  .|..+.+.++
T Consensus       225 ~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       225 VAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHhhcccccCCccCcEEEecCC
Confidence            99999999987532  4656655554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.41  E-value=6.7e-12  Score=103.08  Aligned_cols=197  Identities=12%  Similarity=0.198  Sum_probs=124.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhcc----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     ..+.. ...++.++.+|++|++++.++++.    -.+|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~   88 (263)
T PRK08339         14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKAR-----EKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI   88 (263)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence            799999999999999999999999999865422111     01111 124678899999999888877763    15899


Q ss_pred             EEEccCCCcc------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                        .++.++..++  +..++|++||...+...           .....|
T Consensus        89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~-----------~~~~~y  157 (263)
T PRK08339         89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI-----------PNIALS  157 (263)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC-----------Ccchhh
Confidence            9999986311                        0233444443  45789999998653211           012235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch----------hHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                       .+|...+.+.+       .+|+++..+.||.+..+......          .......+...  +       ...-+..
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~~~  228 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP--I-------PLGRLGE  228 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc--C-------CcccCcC
Confidence             78888776653       36899999999988655210000          00011111110  0       1123567


Q ss_pred             HHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ++|+|+++..++....  ..|+.+.+.++...|
T Consensus       229 p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        229 PEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            8999999999886532  367788887765444

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.40  E-value=1.2e-11  Score=100.92  Aligned_cols=194  Identities=15%  Similarity=0.174  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|+++++++.++++..     .+|.
T Consensus         7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK-----LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999865422111     111112346888999999998887766532     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC-----C-C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL-----P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~-----~-~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                    +..++++++     + + ..++|++||...+....           ....
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~  150 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP-----------GVIH  150 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC-----------CCcc
Confidence            9999975211                    122333333     1 2 35799999875421110           1123


Q ss_pred             c-cchHHHHHHHH--------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~--------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+        ++|+++..++||.+.++......  .....+.+.+..+.         .-+...+|+++
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~  221 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAG  221 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHH
Confidence            4 78888776643        24899999999998754211111  11122222222111         12567899999


Q ss_pred             HHHHHhcCC--cCCCceEEeeCCC
Q 023078          198 AFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++..++...  ...|..+.+.++.
T Consensus       222 ~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        222 LAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHcCccccccCCCEEEECCCe
Confidence            998887653  2367777777664

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.40  E-value=6e-12  Score=103.36  Aligned_cols=194  Identities=14%  Similarity=0.154  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+... .+..     ..+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226         12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLA-----DELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997532 1111     11111134677899999999888877663     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +...++++    +.  +..++|++||......          .......|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~~~Y  155 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------ADPGETAY  155 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------CCCCcchH
Confidence            9999986211                    12223333    22  4568999988643100          00112235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-------chhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                       .+|...+.+.+       ..+++++.++||.+.++....       .........+....+         ...+...+|
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~  226 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP---------LRRLADPLE  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC---------CCCCCCHHH
Confidence             88888877653       247999999999988763110       001112222222211         112467899


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +|+++..++...  ...|+.+.+.++.
T Consensus       227 va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        227 VGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHcCchhcCCcCceEeECCCc
Confidence            999998887543  3356677776653

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.3e-11  Score=102.23  Aligned_cols=153  Identities=15%  Similarity=0.069  Sum_probs=99.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+..+......     .+..  ...++.++.+|+.|.+++.++++..     ++
T Consensus        22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAA-----RITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            7999999999999999999999999998654221110     1111  1246788999999998888776532     58


Q ss_pred             cEEEEccCCCc------------------cc----hHHHHHhCC--CCCcEEEEeeeeEee--cCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREA------------------DE----VEPILDALP--NLEQFIYCSSAGVYL--KSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~------------------~~----~~~l~~a~~--~~~~~i~~Ss~~~y~--~~~~~~~~e~~~~~p~~  127 (287)
                      |++||+||...                  .+    +..+++.++  +..++|++||...+.  ..............+..
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  176 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA  176 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence            99999998521                  11    344556655  457999999986432  21111111112223344


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEE--EEccCceecCC
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWT--SLRPVYIYGPL  158 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~--ilr~~~v~g~~  158 (287)
                      .| .+|...+.+.+       ..+++++  .+.||.+..+.
T Consensus       177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            56 99998887653       2355554  45799887663

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.40  E-value=1.3e-11  Score=100.79  Aligned_cols=194  Identities=18%  Similarity=0.161  Sum_probs=123.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|+..+.....     ..+.....++..+.+|+++++++.++++.     -.+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLA-----DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     11111124677889999999888777653     27999


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|...                    .+...+.+++    .  + ..++|++||....-.         ........
T Consensus        90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~~~~~~  160 (253)
T PRK05867         90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVPQQVSH  160 (253)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCCCCccc
Confidence            999998632                    1222233332    1  1 246888887643100         00011234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..|+++..++||.+-.+.... . ...........+.         --+..++|+|+++.
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~  229 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRPEELAGLYL  229 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 89998887763       358999999999986663211 1 1111122221111         13567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  -.|+.+.+.++.
T Consensus       230 ~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        230 YLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHcCcccCCcCCCeEEECCCc
Confidence            9987532  367788887764

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.9e-12  Score=105.33  Aligned_cols=194  Identities=15%  Similarity=0.220  Sum_probs=121.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|+.+...+..     ..+.....++.++.+|+++++++.++++..     .+|+
T Consensus        15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV-----AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865422111     112222346678899999998888877632     5799


Q ss_pred             EEEccCCC--------------------ccchHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGRE--------------------ADEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+++..                    ..+..++++++    + ...+++++||...+..           ......| 
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----------~~~~~~Y~  158 (264)
T PRK07576         90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----------MPMQAHVC  158 (264)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----------CCCccHHH
Confidence            99998742                    11233344332    2 2358999998754311           1112236 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH--HHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|...+.+.+       ..+++++.++|+.+.+........+  .........  .       ....+...+|+|+++.
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~  229 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--V-------PLKRNGTKQDIANAAL  229 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--C-------CCCCCCCHHHHHHHHH
Confidence            88998887764       2578999999998765321000000  000111110  1       1123567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|..+.+.++.
T Consensus       230 ~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        230 FLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHcChhhcCccCCEEEECCCc
Confidence            9997532  256677776654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.39  E-value=5e-12  Score=98.60  Aligned_cols=180  Identities=16%  Similarity=0.122  Sum_probs=117.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc----cC-CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~-~~d~   75 (287)
                      ||||+-||.++++.|.++|++|++..|+.++..+.-.     ++.  ...+..+..|++|.+++.++++    ++ ++|+
T Consensus        12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~-----~~~--~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221          12 TGASSGIGEATARALAEAGAKVVLAARREERLEALAD-----EIG--AGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH-----hhc--cCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            8999999999999999999999999999887322211     011  0357888999999877555544    22 6999


Q ss_pred             EEEccCCC--------------------ccchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-cc
Q 023078           76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SR  128 (287)
Q Consensus        76 vi~~a~~~--------------------~~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~~  128 (287)
                      +||.||..                    +.+..+...+    +.  +..++|.+||++.            ....|. +.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG------------~~~y~~~~v  152 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAG------------RYPYPGGAV  152 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccc------------cccCCCCcc
Confidence            99999973                    2233444444    22  4569999999874            122233 23


Q ss_pred             c-cchHHHHHHH---H----hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVL---E----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~---~----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|+....+.   +    ..+++++.+-||.+-... .+.+...   .  ..+..   ..--.....+..+|+|+++.
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~-~s~v~~~---g--~~~~~---~~~y~~~~~l~p~dIA~~V~  223 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTE-FSTVRFE---G--DDERA---DKVYKGGTALTPEDIAEAVL  223 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceeccee-cccccCC---c--hhhhH---HHHhccCCCCCHHHHHHHHH
Confidence            6 8888877654   2    368999999999874431 0000000   0  00000   00001235688999999999


Q ss_pred             HHhcCCcC
Q 023078          201 QVLGNEKA  208 (287)
Q Consensus       201 ~~~~~~~~  208 (287)
                      +++++|..
T Consensus       224 ~~~~~P~~  231 (246)
T COG4221         224 FAATQPQH  231 (246)
T ss_pred             HHHhCCCc
Confidence            99998764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.39  E-value=2.2e-11  Score=99.28  Aligned_cols=191  Identities=15%  Similarity=0.108  Sum_probs=121.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+......       ........++.++.+|+++.+++.++++.     -.+|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQ-------AQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCchHHHHH-------HHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999886432110       11112234678899999999988888763     25899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                    +...+.++    +.  + ..++|++||...+.....           ...
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----------~~~  155 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR-----------VPS  155 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC-----------Ccc
Confidence            9999986321                    12222332    22  2 358999999876432111           123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       .+|+++..++||.+-.+...... .......+....+         ...+...+|+|+++
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~peeva~~~  226 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIP---------ASRWGTPDDLAGPA  226 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            5 89998887653       46899999999988665211000 0011111111111         11356789999999


Q ss_pred             HHHhcCC--cCCCceEEeeCC
Q 023078          200 VQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~  218 (287)
                      ..++...  ...|..+.+.++
T Consensus       227 ~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        227 IFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHhCccccCcCCceEEECCC
Confidence            9998643  235677777655

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.39  E-value=1.7e-11  Score=99.15  Aligned_cols=192  Identities=15%  Similarity=0.155  Sum_probs=119.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+.....+..    ..++.....++.++.+|+++.+++.++++.     ...|.
T Consensus         4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESV----VSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999987654321111    112222235688999999999888777653     25799


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC-----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~-----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|...                    .+..++++++     +  +..++|++||...+.+..           ....
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~  148 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR-----------GQVN  148 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC-----------CCcc
Confidence            999988521                    1233344432     1  446899999975421111           1123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++.... .... .....+..++         .-+...+|+++++.
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~-~~~~~~~~~~---------~~~~~~~~va~~~~  217 (239)
T TIGR01831       149 YSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEHD-LDEALKTVPM---------NRMGQPAEVASLAG  217 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhHH-HHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            5 78887665542       358999999999987764211 1111 1111111111         12346799999999


Q ss_pred             HHhcCCc--CCCceEEeeCC
Q 023078          201 QVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~  218 (287)
                      .++....  ..|....+.++
T Consensus       218 ~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       218 FLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHcCchhcCccCCEEEecCC
Confidence            9987532  24555555544

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.39  E-value=7.5e-12  Score=102.15  Aligned_cols=171  Identities=18%  Similarity=0.145  Sum_probs=112.4

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhcc----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~----~~~d   74 (287)
                      |||+|.||++++++|+++| ++|++++|++++..+.+.    .++... ..+++++.+|+.|.+++.++++.    .++|
T Consensus        14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~----~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id   89 (253)
T PRK07904         14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAV----AQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVD   89 (253)
T ss_pred             EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHH----HHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCC
Confidence            7999999999999999995 999999998764111110    111111 23688999999998876555442    2699


Q ss_pred             EEEEccCCCcc------c------------------hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD------E------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~------~------------------~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||++|....      .                  .+.+++.++  +..++|++||...+..           ..+...
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~-----------~~~~~~  158 (253)
T PRK07904         90 VAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV-----------RRSNFV  158 (253)
T ss_pred             EEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC-----------CCCCcc
Confidence            99998876311      0                  122444544  5679999999753211           011223


Q ss_pred             c-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|.....+.       +.+++++++++||.+..+..         .   ....         ....+..+|+|+.++
T Consensus       159 Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~---------~---~~~~---------~~~~~~~~~~A~~i~  217 (253)
T PRK07904        159 YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS---------A---HAKE---------APLTVDKEDVAKLAV  217 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh---------c---cCCC---------CCCCCCHHHHHHHHH
Confidence            5 8888766442       35689999999999877521         0   0000         012468899999999


Q ss_pred             HHhcCCc
Q 023078          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      ..+.++.
T Consensus       218 ~~~~~~~  224 (253)
T PRK07904        218 TAVAKGK  224 (253)
T ss_pred             HHHHcCC
Confidence            9998754

>PRK08589 short chain dehydrogenase; Validated

Probab=99.39  E-value=7e-12  Score=103.50  Aligned_cols=197  Identities=17%  Similarity=0.157  Sum_probs=122.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+ ....+..     .++.....++.++.+|+++.+++.++++.     -.+|+
T Consensus        12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589         12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-----DKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            7999999999999999999999999998 4322111     11111234678899999999888776653     15899


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                     +    .+.++..+. ...++|++||...+....           ....|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y  154 (272)
T PRK08589         86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL-----------YRSGY  154 (272)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-----------CCchH
Confidence            9999986321                     0    111223332 336899999976542211           12236


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch---hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                       .+|...+.+.+       ..+++++.+.||.+..+......   ...+...........   .  ...-+..++|+|++
T Consensus       155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~va~~  229 (272)
T PRK08589        155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM---T--PLGRLGKPEEVAKL  229 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc---C--CCCCCcCHHHHHHH
Confidence             89998887763       35799999999998766321100   000000111000000   0  01124678999999


Q ss_pred             HHHHhcCC--cCCCceEEeeCCC
Q 023078          199 FVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +..++...  ...|+.+.+.++.
T Consensus       230 ~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        230 VVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHHcCchhcCcCCCEEEECCCc
Confidence            99988653  2357777777664

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.38  E-value=5.8e-12  Score=103.29  Aligned_cols=175  Identities=18%  Similarity=0.132  Sum_probs=112.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |||||+||+++++.|+++|++|++++|+.+...+...     ..  ...++.++.+|+++.+++.++++.      .++|
T Consensus         7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-----EL--GAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            7999999999999999999999999998765221110     00  024688999999999888877652      2579


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|||++|....                    +...++++    ++  +..++|++||... ++..            ...
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~  147 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP------------GLA  147 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC------------Cch
Confidence            99999986321                    12223333    23  4578999998753 3211            122


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.++||.+..+...... ......    . .      ......+..+|+++++
T Consensus       148 ~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~----~-~------~~~~~~~~~~~va~~~  215 (260)
T PRK08267        148 VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS-NEVDAG----S-T------KRLGVRLTPEDVAEAV  215 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc-chhhhh----h-H------hhccCCCCHHHHHHHH
Confidence            35 88888776653       35799999999987655211100 000000    0 0      0011135679999999


Q ss_pred             HHHhcCC
Q 023078          200 VQVLGNE  206 (287)
Q Consensus       200 ~~~~~~~  206 (287)
                      +.+++..
T Consensus       216 ~~~~~~~  222 (260)
T PRK08267        216 WAAVQHP  222 (260)
T ss_pred             HHHHhCC
Confidence            9998753

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.38  E-value=5e-12  Score=105.42  Aligned_cols=172  Identities=16%  Similarity=0.167  Sum_probs=113.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|+.....+..     ..+......+.++.+|+.|.+++.++++.     ..+|+
T Consensus        46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA-----DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     11111124577889999999888877762     26899


Q ss_pred             EEEccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||++|....                      +    .+.++..++  +..++|++||.+++....          ....
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------p~~~  190 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS----------PLFS  190 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC----------CCcc
Confidence            9999986321                      1    111222232  567999999976542110          1123


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.++||.+-.+...            ....    ..   ....+..+++|+.+
T Consensus       191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~------------~~~~----~~---~~~~~~pe~vA~~~  251 (293)
T PRK05866        191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA------------PTKA----YD---GLPALTADEAAEWM  251 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc------------cccc----cc---CCCCCCHHHHHHHH
Confidence            36 89998877653       35899999999976554210            0000    00   11246789999999


Q ss_pred             HHHhcCC
Q 023078          200 VQVLGNE  206 (287)
Q Consensus       200 ~~~~~~~  206 (287)
                      +.++++.
T Consensus       252 ~~~~~~~  258 (293)
T PRK05866        252 VTAARTR  258 (293)
T ss_pred             HHHHhcC
Confidence            9999864

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2.1e-11  Score=100.12  Aligned_cols=192  Identities=14%  Similarity=0.130  Sum_probs=121.0

Q ss_pred             CCccc-chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-h-cCCcEEEEecCCChHHHHhhhcc-----CC
Q 023078            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~~~~~~~~-----~~   72 (287)
                      |||+| -||+++++.|+++|++|++.+|+..+..+..     ..+.. . ..++.++++|+++.+++.++++.     -.
T Consensus        23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETA-----DELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            79997 6999999999999999999998765422111     01111 1 13578899999999888877753     26


Q ss_pred             ccEEEEccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|++||++|....                    +...++++    +.  + ..++|++||...+..           ..+
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~  166 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA-----------QHG  166 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------CCC
Confidence            8999999986311                    11222222    22  2 457888887643211           112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      ...| .+|.+.+.+.+       .++++++.++||.+..+.............+....++         .-+...+|+|+
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~  237 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVAN  237 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            2346 89999888763       3589999999999988742211112222233322221         12456799999


Q ss_pred             HHHHHhcCCc--CCCceEEeeC
Q 023078          198 AFVQVLGNEK--ASRQVFNISG  217 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~  217 (287)
                      ++..++....  ..|+.+.+.+
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCC
Confidence            9999887542  3566776655

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.38  E-value=7.2e-12  Score=101.98  Aligned_cols=171  Identities=18%  Similarity=0.198  Sum_probs=113.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||+++++.|+++|++|++++|++....+...     .+...  ..++.++.+|+++.+++.++++..     ++
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKA-----ELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998755321110     11111  246788999999998887766532     68


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||++|....                    +...++++    ++  +..++|++||.....+.          +.+..
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~~~~  152 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------PGVKA  152 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------CCCcc
Confidence            999999985321                    12222332    22  56789999997643211          11223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.++||.+.++..         +.   .+      .   ....+..+|.++++
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~---------~~---~~------~---~~~~~~~~~~a~~i  211 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN---------AK---AK------S---TPFMVDTETGVKAL  211 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh---------hc---cc------c---CCccCCHHHHHHHH
Confidence            45 88988776652       2478999999998866521         00   00      0   11357789999999


Q ss_pred             HHHhcCCc
Q 023078          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      ...+++..
T Consensus       212 ~~~~~~~~  219 (248)
T PRK08251        212 VKAIEKEP  219 (248)
T ss_pred             HHHHhcCC
Confidence            99998643

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.38  E-value=3.2e-12  Score=105.67  Aligned_cols=136  Identities=18%  Similarity=0.128  Sum_probs=96.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........           ..++.++.+|+.+.+++.++++..     ++|+
T Consensus         7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-----------AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865522111           235778899999998887776532     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      |||++|....                    +...++++    ++ +..++|++||...+...           .....| 
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  144 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT-----------PFAGAYC  144 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----------CCccHHH
Confidence            9999986321                    12223333    33 44678999886543211           112335 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCC
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~  158 (287)
                      .+|...+.+.+       ..+++++.++||.+..+.
T Consensus       145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence            88888777642       368999999999997663

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.37  E-value=3e-12  Score=108.33  Aligned_cols=152  Identities=16%  Similarity=0.194  Sum_probs=98.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||.++++.|+++|++|++++|+..+......     .+.....++.++.+|+++.+++.++++.     ..+|+
T Consensus        12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453         12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ-----ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            7999999999999999999999999998665322111     0111124678899999999888877763     24999


Q ss_pred             EEEccCCCcc---------------------chHHH----HHhCC--C--CCcEEEEeeeeEeecC-C-C--CCC--C--
Q 023078           76 VYDINGREAD---------------------EVEPI----LDALP--N--LEQFIYCSSAGVYLKS-D-L--LPH--C--  118 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l----~~a~~--~--~~~~i~~Ss~~~y~~~-~-~--~~~--~--  118 (287)
                      +||+||....                     +...+    +..++  +  ..|+|++||...+... . .  .+.  .  
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~  166 (322)
T PRK07453         87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG  166 (322)
T ss_pred             EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence            9999985210                     12222    23232  2  3599999998764311 0 0  000  0  


Q ss_pred             ----------------CCCCCCCCccc-cchHHHHHHH----Hh----cCCcEEEEccCceecC
Q 023078          119 ----------------ETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGP  157 (287)
Q Consensus       119 ----------------e~~~~~p~~~~-~~k~~~E~~~----~~----~~~~~~ilr~~~v~g~  157 (287)
                                      +..+..|...| .+|...+.+.    ++    .++.++.++||.+++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence                            11123444557 9998765443    22    4799999999999864

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.37  E-value=4e-11  Score=98.40  Aligned_cols=195  Identities=17%  Similarity=0.173  Sum_probs=120.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|+++|++|+++.|+.........    ..+.....++.++.+|++|.+++.++++.     ..+|+
T Consensus        13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998886543211111    11111134677889999999888777653     15899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+++....                    +    +..+++.+.  + ..++|++||...+.           +..+...
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  157 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------PWPLFVH  157 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------CCCCCcc
Confidence            9999986321                    0    122333333  2 36899999864321           1112234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|.+.+.+.+       ..+++++.++||.+..+.....+ .+..........+         ...+...+|+++++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  228 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP---------MGYIGKPEEIAAVA  228 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            5 88877665542       35899999999999877422111 1111111111111         11356689999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ..++....  ..|..+.+.++.
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHcCcccCCccCcEEEECCCc
Confidence            99886532  256666666553

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=1.7e-11  Score=99.17  Aligned_cols=186  Identities=17%  Similarity=0.218  Sum_probs=117.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++........     ... ...+++++.+|+.+++++.++++..     .+|.
T Consensus        11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786         11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKK-----TLS-KYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHH-hcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998764221100     001 1236788999999998887766531     4699


Q ss_pred             EEEccCCCcc------------------ch----HHHHHhCCCCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCccc-cc
Q 023078           76 VYDINGREAD------------------EV----EPILDALPNLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        76 vi~~a~~~~~------------------~~----~~l~~a~~~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      ++|+++....                  +.    +.++..++...++|++||... ++.           ..+...| .+
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~~Y~~s  153 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPDQLSYAVA  153 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCCchHHHHH
Confidence            9999875321                  11    112222233357899988653 211           1122335 88


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      |...+.+.+       ..+++++++||++++++.....       ....   ..     .....++..+|+++++..++.
T Consensus       154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-------~~~~---~~-----~~~~~~~~~~~va~~~~~~~~  218 (238)
T PRK05786        154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-------NWKK---LR-----KLGDDMAPPEDFAKVIIWLLT  218 (238)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-------hhhh---hc-----cccCCCCCHHHHHHHHHHHhc
Confidence            887776542       3589999999999998732110       0000   00     001135678999999999987


Q ss_pred             CCc--CCCceEEeeCC
Q 023078          205 NEK--ASRQVFNISGE  218 (287)
Q Consensus       205 ~~~--~~~~~~~~~~~  218 (287)
                      .+.  ..|..+.+.++
T Consensus       219 ~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        219 DEADWVDGVVIPVDGG  234 (238)
T ss_pred             ccccCccCCEEEECCc
Confidence            533  25666666543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.37  E-value=6.3e-12  Score=100.75  Aligned_cols=176  Identities=18%  Similarity=0.159  Sum_probs=119.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      ||||+.||..+++.|.++|++|+++.|+.++..+..     .++... .-.++++.+|+++++++..+.++     ..+|
T Consensus        12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la-----~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id   86 (265)
T COG0300          12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALA-----KELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID   86 (265)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-----HHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence            899999999999999999999999999988743222     122221 23568899999998777776542     3799


Q ss_pred             EEEEccCCCccc------------------------hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc-
Q 023078           75 VVYDINGREADE------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-  127 (287)
Q Consensus        75 ~vi~~a~~~~~~------------------------~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~-  127 (287)
                      ++||+||....+                        +..++.-+.  +..++|.++|.+.|-+            .|.. 
T Consensus        87 vLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------------~p~~a  154 (265)
T COG0300          87 VLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------------TPYMA  154 (265)
T ss_pred             EEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC------------CcchH
Confidence            999999984322                        122222222  5678999999886421            2222 


Q ss_pred             cc-cchHHHHHH-------HHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~-------~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...-.+       ++..|+.++.+.||.+..++..           ..+....   ......-++..+|+|+..
T Consensus       155 vY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-----------~~~~~~~---~~~~~~~~~~~~~va~~~  220 (265)
T COG0300         155 VYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-----------AKGSDVY---LLSPGELVLSPEDVAEAA  220 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-----------ccccccc---cccchhhccCHHHHHHHH
Confidence            35 888765443       2457899999999987666321           0111111   011234678999999999


Q ss_pred             HHHhcCCc
Q 023078          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +..+.+.+
T Consensus       221 ~~~l~~~k  228 (265)
T COG0300         221 LKALEKGK  228 (265)
T ss_pred             HHHHhcCC
Confidence            99998754

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.36  E-value=1.5e-11  Score=101.56  Aligned_cols=180  Identities=17%  Similarity=0.219  Sum_probs=113.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCC---CchhhhhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+.+.... +...   ..........++.++.+|+++.+++.++++..     +
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   90 (273)
T PRK08278         12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPK-LPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGG   90 (273)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecccccccc-hhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998654211 1100   01112222356788999999999888877642     6


Q ss_pred             ccEEEEccCCCc--------------------cchHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +|++||++|...                    .+..++++++.      +..+++++||.....        . ....+.
T Consensus        91 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------~-~~~~~~  161 (273)
T PRK08278         91 IDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD--------P-KWFAPH  161 (273)
T ss_pred             CCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--------c-cccCCc
Confidence            899999998621                    12333444432      345788888753210        0 001223


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|.+.|.+.+       ..+++++.+.|+.++..    ..    .+....+.        .....+...+|+|++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t----~~----~~~~~~~~--------~~~~~~~~p~~va~~  225 (273)
T PRK08278        162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT----AA----VRNLLGGD--------EAMRRSRTPEIMADA  225 (273)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc----HH----HHhccccc--------ccccccCCHHHHHHH
Confidence            446 99999998763       35799999999843221    01    11111111        111235788999999


Q ss_pred             HHHHhcCC
Q 023078          199 FVQVLGNE  206 (287)
Q Consensus       199 ~~~~~~~~  206 (287)
                      ++.++...
T Consensus       226 ~~~l~~~~  233 (273)
T PRK08278        226 AYEILSRP  233 (273)
T ss_pred             HHHHhcCc
Confidence            99988764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1e-11  Score=100.76  Aligned_cols=136  Identities=16%  Similarity=0.127  Sum_probs=96.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---------C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------~   71 (287)
                      |||||+||+++++.|+++|++|++++|+..+...          .....++.++.+|+.+.+++.+++..         .
T Consensus         7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLA----------AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ecCCcchHHHHHHHHHhCCCEEEEEecCcchhhh----------hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            7999999999999999999999999998654210          01134688899999999888875432         2


Q ss_pred             CccEEEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      .+|.+||+++....                     +    ...+++.+.  +..++|++||...+...           .
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~  145 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------A  145 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------C
Confidence            58999999886321                     1    223344443  45799999997654211           1


Q ss_pred             CCccc-cchHHHHHHHH------hcCCcEEEEccCceecC
Q 023078          125 PKSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~------~~~~~~~ilr~~~v~g~  157 (287)
                      +...| .+|...|.+++      ..++++..++||.+-.+
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            23346 88998888774      24799999999987444

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.35  E-value=1.7e-11  Score=100.33  Aligned_cols=194  Identities=15%  Similarity=0.113  Sum_probs=120.6

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCC--CC----CchhhhhhcCCcEEEEecCCChHHHHhhhcc--
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--   70 (287)
                      |||||  .||.++++.|+++|++|++++|++........  ..    ..........+++++.+|+++.+++..+++.  
T Consensus        11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   90 (256)
T PRK12748         11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS   90 (256)
T ss_pred             eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            79995  69999999999999999999997332100000  00    0011112234688999999998887776653  


Q ss_pred             ---CCccEEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           71 ---KGFDVVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        71 ---~~~d~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                         -.+|+|||+++....                    +...+++++    .  +..++|++||...+++.         
T Consensus        91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------  161 (256)
T PRK12748         91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM---------  161 (256)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC---------
Confidence               258999999986311                    123333332    2  34689999997654321         


Q ss_pred             CCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                        .....| .+|.+.+.+++       ..+++++.++||.+..+....    ..........+    .     ..+...+
T Consensus       162 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~~~----~-----~~~~~~~  226 (256)
T PRK12748        162 --PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----ELKHHLVPKFP----Q-----GRVGEPV  226 (256)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hHHHhhhccCC----C-----CCCcCHH
Confidence              112236 89999988753       258999999999876653211    11111111110    0     1234579


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      |+++++..++....  ..+..+++.++
T Consensus       227 ~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        227 DAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             HHHHHHHHHhCcccccccCCEEEecCC
Confidence            99999988876532  35778888665

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.35  E-value=1e-11  Score=114.39  Aligned_cols=202  Identities=18%  Similarity=0.215  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+..  ....+..+.+|++|.+++.++++..     ++
T Consensus       420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~-----~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVA-----AEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865422110     01110  0124678899999999888887642     68


Q ss_pred             cEEEEccCCCccc------------------------hHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREADE------------------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      |++||++|.....                        .+.++..++  + ..++|++||...+...           ...
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-----------~~~  563 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-----------KNA  563 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----------CCC
Confidence            9999999863211                        112223332  2 3579999997542111           112


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCcee-cCCCCCchhHHHHHHHHc-CCC----cccCCCCCceeeeeeH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKA-GRP----IPIPGSGIQVTQLGHV  192 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~-g~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~i~~  192 (287)
                      ..| .+|...+.+.+       ..++++..++|+.++ |.+.....  +...+... +..    ...+........+++.
T Consensus       564 ~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~p  641 (676)
T TIGR02632       564 SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE--WREERAAAYGIPADELEEHYAKRTLLKRHIFP  641 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc--chhhhhhcccCChHHHHHHHHhcCCcCCCcCH
Confidence            346 99999887764       247999999999887 33211110  00000000 000    0000111122346889


Q ss_pred             HHHHHHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          193 KDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       193 ~Dva~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      +|+|+++..++...  ...|.++++.+|..
T Consensus       642 eDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       642 ADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            99999999887643  33578899887753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.35  E-value=2.3e-11  Score=100.07  Aligned_cols=186  Identities=17%  Similarity=0.146  Sum_probs=118.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....              ..++.++.+|+++++++.++++.     ..+|+
T Consensus        15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998765421              23677889999999888877653     25899


Q ss_pred             EEEccCCCcc-----------------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCC
Q 023078           76 VYDINGREAD-----------------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        76 vi~~a~~~~~-----------------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~  120 (287)
                      +||++|....                             +...+++++    .  +..++|++||...+.+.        
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  152 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS--------  152 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC--------
Confidence            9999985311                             122233332    2  34579999997653211        


Q ss_pred             CCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceec-CCCCCchh-----------HHHHHHHHcCCCcccC
Q 023078          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYG-PLNYNPVE-----------EWFFHRLKAGRPIPIP  180 (287)
Q Consensus       121 ~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g-~~~~~~~~-----------~~~~~~~~~~~~~~~~  180 (287)
                         .....| .+|...+.+.+       ..++++..++||.+-. +.......           ..+...+.+....+  
T Consensus       153 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  227 (266)
T PRK06171        153 ---EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP--  227 (266)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc--
Confidence               112346 88888887653       3589999999998742 21110000           00111111100111  


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          181 GSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       181 ~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                           ..-+...+|+|+++..++....  -.|+.+++.++
T Consensus       228 -----~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        228 -----LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             -----CCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence                 1234677999999998886532  25677777665

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.4e-11  Score=104.20  Aligned_cols=178  Identities=17%  Similarity=0.208  Sum_probs=115.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||||.||+++++.|+++|++|++++|+.+...+..     .+.......+.++.+|++|.+++.++++.     -.+|+
T Consensus        13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139         13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAVA-----EECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532211     11122234677889999999888887642     26899


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +..+    ++..++  +..++|++||...+....           ....|
T Consensus        88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p-----------~~~~Y  156 (330)
T PRK06139         88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP-----------YAAAY  156 (330)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC-----------CchhH
Confidence            9999986321                    1122    222222  456899999876542211           11235


Q ss_pred             -cchHHHHHHHH-------h-cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~-~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|.....+.+       . .++.++.+.||.+..|......      .. .+...      .....+++.+|+|++++
T Consensus       157 ~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~~-~~~~~------~~~~~~~~pe~vA~~il  223 (330)
T PRK06139        157 SASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------NY-TGRRL------TPPPPVYDPRRVAKAVV  223 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------cc-ccccc------cCCCCCCCHHHHHHHHH
Confidence             88887554431       2 3799999999999887421100      00 00000      11224678999999999


Q ss_pred             HHhcCCc
Q 023078          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      .++++++
T Consensus       224 ~~~~~~~  230 (330)
T PRK06139        224 RLADRPR  230 (330)
T ss_pred             HHHhCCC
Confidence            9998754

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.34  E-value=4e-11  Score=98.58  Aligned_cols=196  Identities=19%  Similarity=0.212  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     ..+...  ..++..+.+|++|.+++.++++.     -.+
T Consensus        14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062         14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAE-----ARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999875522111     011111  13577889999999888776653     258


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||++|....                        .++.++..++  +..++|++||...+....           ...
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~  157 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP-----------HMV  157 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC-----------Cch
Confidence            999999986311                        0222334444  456899999976532111           112


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh---------HHHHHHHHcCCCcccCCCCCceeeee
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      .| .+|...+.+.+       ..|++++.++||.+-.+.....+.         ..+...+.....++       ..-+.
T Consensus       158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~  230 (265)
T PRK07062        158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLG  230 (265)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCC
Confidence            34 77777665542       368999999999886653111000         00011111001111       11356


Q ss_pred             eHHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          191 HVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ..+|+|+++..++...  ...|+.+.+.++.
T Consensus       231 ~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        231 RPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             CHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            7899999999988642  2367788887663

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.33  E-value=7.6e-11  Score=96.67  Aligned_cols=195  Identities=15%  Similarity=0.139  Sum_probs=119.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhh-hhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+++++.|+++|++|+++.|+.....+...    ..+. ....++.++.+|++|++++.++++..     ++|
T Consensus        14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            7999999999999999999999988765433111110    0111 11246788999999998887777632     589


Q ss_pred             EEEEccCCCc---------------cc---------------hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           75 VVYDINGREA---------------DE---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        75 ~vi~~a~~~~---------------~~---------------~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                      ++||+++...               ..               ++.++..++  +..++|++||.......          
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  159 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI----------  159 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC----------
Confidence            9999997421               00               122333333  44689999996532110          


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                       .....| .+|...+.+.+       ..++++..+.||.+-.+...... ............+         ..-+..++
T Consensus       160 -~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~  229 (260)
T PRK08416        160 -ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP---------LNRMGQPE  229 (260)
T ss_pred             -CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC---------CCCCCCHH
Confidence             011235 89999888763       35899999999987554210000 0011111111111         11256789


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      |+|.+++.++....  ..|+.+.+.++.
T Consensus       230 ~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        230 DLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            99999999886532  256777776653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.33  E-value=4.1e-11  Score=97.73  Aligned_cols=188  Identities=13%  Similarity=0.100  Sum_probs=114.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC---------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------   71 (287)
                      |||+|+||+++++.|+++|++|++++|++.+....+.       .....+++++.+|+++.+++.++++..         
T Consensus         7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA-------EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH-------hccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            7999999999999999999999999998633111111       011356888999999998888777531         


Q ss_pred             CccEEEEccCCC---------------------ccc----hHHHHHhCC---CCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGRE---------------------ADE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 ~~d~vi~~a~~~---------------------~~~----~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      +..++||++|..                     ..+    .+.++..++   +.+++|++||...+.           +.
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~  148 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------PY  148 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------CC
Confidence            122778887652                     111    233344443   245899999975421           11


Q ss_pred             CCCccc-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceee
Q 023078          124 DPKSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      .+...| .+|...+.+.+         ..++++..++||.+-.+....     ..............       +  .--
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~  219 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK-------E--EGK  219 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh-------h--cCC
Confidence            223346 88998887753         246889999999876542100     00000000000000       0  112


Q ss_pred             eeeHHHHHHHHHHHhcC-CcCCCceEEe
Q 023078          189 LGHVKDLARAFVQVLGN-EKASRQVFNI  215 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~-~~~~~~~~~~  215 (287)
                      +..++|+|++++.++.. ....|..+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            57889999999999876 3334555544

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.33  E-value=2e-11  Score=103.04  Aligned_cols=191  Identities=18%  Similarity=0.150  Sum_probs=116.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccC--CccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAK--GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~--~~d~vi   77 (287)
                      +||||.+|+.+++.|+++|+.|.+++|+..+..+.+...      ....+...+..+.... +.+.......  ...+++
T Consensus        85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~------~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~  158 (411)
T KOG1203|consen   85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVF------FVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI  158 (411)
T ss_pred             ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhccc------ccccccceeeeccccccchhhhhhhhccccceeEE
Confidence            599999999999999999999999999988755444300      0023444455555443 3333333211  233444


Q ss_pred             EccCC-------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCC-CCccccchHHHHHHHHh
Q 023078           78 DINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKGKLNTESVLES  141 (287)
Q Consensus        78 ~~a~~-------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~-p~~~~~~k~~~E~~~~~  141 (287)
                      -+++-             .-.+++|+++||+  +++|++++|+++.-.....     ..... -...+.+|..+|+++++
T Consensus       159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~-----~~~~~~~~~~~~~k~~~e~~~~~  233 (411)
T KOG1203|consen  159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQP-----PNILLLNGLVLKAKLKAEKFLQD  233 (411)
T ss_pred             ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCC-----chhhhhhhhhhHHHHhHHHHHHh
Confidence            44432             1236899999998  9999999998765211111     00111 11123889999999999


Q ss_pred             cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                      .+++++|+|++...-........      ........  ...+..-..+.-.|+|+.++.++.+....+
T Consensus       234 Sgl~ytiIR~g~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  234 SGLPYTIIRPGGLEQDTGGQREV------VVDDEKEL--LTVDGGAYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             cCCCcEEEeccccccCCCCccee------cccCcccc--ccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence            99999999999766542111000      00001101  111111147888999999999998765544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.33  E-value=3e-11  Score=99.28  Aligned_cols=191  Identities=16%  Similarity=0.149  Sum_probs=121.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|++.......        .....++.++.+|+.+.+++.++++..     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200         12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLR--------QRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865532111        111246788999999988887776532     6899


Q ss_pred             EEEccCCCcc-------------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +||++|....                         +...++++    ++ ...++|++||...+....           .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~  152 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG-----------G  152 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------C
Confidence            9999985310                         11112222    22 335799999877542211           1


Q ss_pred             Cccc-cchHHHHHHHHh------cCCcEEEEccCceecCCCCCc-h---------hHHHHHHHHcCCCcccCCCCCceee
Q 023078          126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-V---------EEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~~------~~~~~~ilr~~~v~g~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      ...| .+|...+.+.+.      .++++..+.||.+..+..... .         .+..........         ...-
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r  223 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAIT---------PLQF  223 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCC---------CCCC
Confidence            2235 899998877632      258999999998866531100 0         000011111110         1123


Q ss_pred             eeeHHHHHHHHHHHhcCC-c--CCCceEEeeCCC
Q 023078          189 LGHVKDLARAFVQVLGNE-K--ASRQVFNISGEK  219 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~~-~--~~~~~~~~~~~~  219 (287)
                      +...+|+|+++..++... .  ..|+.+.+.++.
T Consensus       224 ~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            567899999999988644 2  367777776653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.32  E-value=9.6e-11  Score=95.69  Aligned_cols=191  Identities=15%  Similarity=0.130  Sum_probs=120.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|+++++.....  ..     ..+......+..+++|++|.+++.+++++     ..+|+
T Consensus        16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~--~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTE--TI-----EQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEecCcchHH--HH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999887754321  00     11111124577889999999888887764     26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|...                    .+...+.++    +.  + ..++|++||...+.+...           ...
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------~~~  157 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR-----------VPS  157 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC-----------Ccc
Confidence            999998631                    112223333    22  2 257999999876543211           124


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|.+.+.+.+       ..|++++.++||.+-.+...... .....+.+.+.  ++       ..-+...+|+|+++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~eva~~~  228 (253)
T PRK08993        158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR--IP-------AGRWGLPSDLMGPV  228 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc--CC-------CCCCcCHHHHHHHH
Confidence            5 88988887653       35899999999998766311100 00011111111  11       11256789999999


Q ss_pred             HHHhcCCc--CCCceEEeeCC
Q 023078          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~  218 (287)
                      ..++....  ..|..+.+.++
T Consensus       229 ~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        229 VFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHhCccccCccCcEEEECCC
Confidence            99887532  25666666554

>PRK06484 short chain dehydrogenase; Validated

Probab=99.32  E-value=3.4e-11  Score=108.60  Aligned_cols=191  Identities=17%  Similarity=0.235  Sum_probs=124.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||.++++.|+++|++|++++|+..+.....        .....++..+.+|++|++++.++++.     -.+|+
T Consensus       275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA--------EALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111        01124566789999999888877763     25899


Q ss_pred             EEEccCCCc---------------------cchHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||++|...                     .+...+.++    +++..++|++||...+...           .+...| 
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  415 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL-----------PPRNAYC  415 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----------CCCchhH
Confidence            999998631                     012222232    3344689999997653211           122346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|...+.+.+       ..+++++.+.||.+..+......  .......+.+..+.         ..+..++|+|++++
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~  486 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIA  486 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            89999887653       35799999999998776321100  00011122221111         12467899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+.+.++.
T Consensus       487 ~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        487 FLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHhCccccCccCcEEEECCCc
Confidence            9887532  367788887663

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.30  E-value=9e-11  Score=96.20  Aligned_cols=193  Identities=18%  Similarity=0.209  Sum_probs=121.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+.+++.|+++|++|++++|++....+..     .++.. ..++.++.+|++|.+++.++++.     -.+|+
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKAL-----KELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865522111     01111 13577899999999888877753     26899


Q ss_pred             EEEccCCCcc--------c------------------hHHHHHh-CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD--------E------------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~--------~------------------~~~l~~a-~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +||++|....        .                  +..++.. ++  +..++|++||...+..           ..+.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  148 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----------MPPL  148 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----------CCCc
Confidence            9999985210        0                  1112222 21  3568999999865321           1112


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh----------HH-HHHHHHcCCCcccCCCCCcee
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----------EW-FFHRLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~  187 (287)
                      ..| .+|...+.+.+       ..++++..+.||.+-.+.......          .. ....+.+.  .       ...
T Consensus       149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~  219 (259)
T PRK08340        149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--T-------PLK  219 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--C-------Ccc
Confidence            235 88888877653       357999999999876653110000          00 00011110  0       011


Q ss_pred             eeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       188 ~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      -+...+|+|+++..++...  .-.|.+..+.++.
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            2567899999999988753  2367777777664

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.30  E-value=2.9e-11  Score=101.05  Aligned_cols=182  Identities=22%  Similarity=0.228  Sum_probs=115.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||..+++.|.++|++|++++|+.....+...     .+. ....+..+.+|++|.+++.++++.     -.+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-----~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALAA-----ELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998665221110     000 023455667999999888777653     26899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||++|....                    +..++++++    . ...++|++||...+....           ....| 
T Consensus        89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~  157 (296)
T PRK05872         89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------GMAAYC  157 (296)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------CchHHH
Confidence            9999986321                    122233332    2 345899999987643211           12246 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH-HHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      .+|...+.+.+       ..++.++.+.||.+..+........ .....+....+.       ....++..+|+++++..
T Consensus       158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~~va~~i~~  230 (296)
T PRK05872        158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW-------PLRRTTSVEKCAAAFVD  230 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC-------cccCCCCHHHHHHHHHH
Confidence            88998887763       3689999999998866531110000 111111111110       11245789999999999


Q ss_pred             HhcCC
Q 023078          202 VLGNE  206 (287)
Q Consensus       202 ~~~~~  206 (287)
                      ++...
T Consensus       231 ~~~~~  235 (296)
T PRK05872        231 GIERR  235 (296)
T ss_pred             HHhcC
Confidence            98764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.29  E-value=3.3e-11  Score=111.76  Aligned_cols=171  Identities=16%  Similarity=0.176  Sum_probs=117.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||||+||+++++.|+++|++|++++|++....+..     .++.....++.++.+|++|.+++.++++..     .+|+
T Consensus       377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELV-----AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999875522111     111112346888999999998888777632     5899


Q ss_pred             EEEccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||++|....                      +    +..++..++  +..++|++||.+.+....           ...
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~  520 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP-----------RFS  520 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------Ccc
Confidence            9999986310                      0    112233333  567999999988764321           122


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.++||.+..+.....            ..   +.    ....+..+++|+.+
T Consensus       521 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~---~~----~~~~~~~~~~a~~i  581 (657)
T PRK07201        521 AYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KR---YN----NVPTISPEEAADMV  581 (657)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------cc---cc----CCCCCCHHHHHHHH
Confidence            35 89998887763       3589999999999877631100            00   00    12357899999999


Q ss_pred             HHHhcCC
Q 023078          200 VQVLGNE  206 (287)
Q Consensus       200 ~~~~~~~  206 (287)
                      +..+.+.
T Consensus       582 ~~~~~~~  588 (657)
T PRK07201        582 VRAIVEK  588 (657)
T ss_pred             HHHHHhC
Confidence            9987653

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.27  E-value=3.7e-11  Score=98.68  Aligned_cols=175  Identities=16%  Similarity=0.150  Sum_probs=111.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|+||.++++.|+++|++|++++|++....+...     .+ ....++.++.+|+.|.+++.++++.    ..+|++
T Consensus        11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072         11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-----RL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999999999998655221110     11 1134788999999999887776542    258999


Q ss_pred             EEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           77 YDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      ||++|....                    ++.++++++    .  +..++|++||...+.+..           ....| 
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y~  153 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-----------GYASYC  153 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----------CccHHH
Confidence            999986321                    223333332    2  346788888865321110           11235 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       ..++.++.+.||.+..+...         ...  ....  .  ........++|+|++++.+
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~~--~~~~--~--~~~~~~~~~~~va~~i~~~  218 (263)
T PRK09072        154 ASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EAV--QALN--R--ALGNAMDDPEDVAAAVLQA  218 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hhc--cccc--c--cccCCCCCHHHHHHHHHHH
Confidence            78887665542       35789999999877554210         000  0000  0  0011356789999999999


Q ss_pred             hcCCc
Q 023078          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +++..
T Consensus       219 ~~~~~  223 (263)
T PRK09072        219 IEKER  223 (263)
T ss_pred             HhCCC
Confidence            98754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.26  E-value=9e-11  Score=94.11  Aligned_cols=139  Identities=19%  Similarity=0.164  Sum_probs=93.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---CCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~d~vi   77 (287)
                      |||+|++|+++++.|+++|++|++++|++..... +.        . ..++.++.+|++|.+++.++++.   .++|+||
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~--------~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQ--------A-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HH--------h-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            7999999999999999999999999998765221 11        0 23677889999998877776653   3699999


Q ss_pred             EccCCCcc----------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           78 DINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        78 ~~a~~~~~----------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      |++|....                      +...+.++    ++ +..+++++||..  |....      .+..+...| 
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~------~~~~~~~~Y~  148 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL------PDGGEMPLYK  148 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc------CCCCCccchH
Confidence            99876311                      12223333    23 335777887743  22111      011122236 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecC
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~  157 (287)
                      .+|...+.+.+       ..++.++.++||.+-.+
T Consensus       149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            89999888764       24689999999987555

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.26  E-value=1.2e-10  Score=95.84  Aligned_cols=195  Identities=13%  Similarity=0.112  Sum_probs=114.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHH----Hhhhc----c-
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLS----A-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~----~~~~~----~-   70 (287)
                      |||+|+||+++++.|+++|++|+++.|+.....+.+.    .++.. ....+.++.+|++|.+.+    .++++    . 
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLA----AELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH----HHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            7999999999999999999999998765432111110    11110 123466789999998644    33322    1 


Q ss_pred             CCccEEEEccCCCcc-------------------------------chHHHHHh----CCC--------CCcEEEEeeee
Q 023078           71 KGFDVVYDINGREAD-------------------------------EVEPILDA----LPN--------LEQFIYCSSAG  107 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~-------------------------------~~~~l~~a----~~~--------~~~~i~~Ss~~  107 (287)
                      -++|++||++|....                               +...+.++    +++        ..+++.+||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            169999999985210                               01112222    111        12466666543


Q ss_pred             EeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCccc
Q 023078          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       108 ~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      ..           .+..+...| .+|...+.+.+       ..|++++.++||.+..+....   ...........+.  
T Consensus       163 ~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~~~~~~--  226 (267)
T TIGR02685       163 TD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYRRKVPL--  226 (267)
T ss_pred             cc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHHHhCCC--
Confidence            21           111222346 99999887763       358999999999887663211   1111222211111  


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       180 ~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                       +     ..+...+|++++++.++....  ..|..+.+.++..+
T Consensus       227 -~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       227 -G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             -C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence             0     123578999999999887642  36777888766543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.1e-10  Score=96.34  Aligned_cols=179  Identities=17%  Similarity=0.136  Sum_probs=110.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcC-CcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||+|.||.++++.|+++|++|++++|+++......     .++..... .+.++.+|+++++++.++++.     ..+|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV-----ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999765421111     01111112 345578999998887766653     1589


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      ++||++|....                    +...++++    +.   ...++|++||...+.+.           ....
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----------~~~~  149 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-----------PWHA  149 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-----------CCCc
Confidence            99999986321                    12233343    21   24689999987542111           0112


Q ss_pred             cc-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCch------hHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      .| .+|...+.+.       ...++++++++||.+.++......      ..........          ......+..+
T Consensus       150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  219 (272)
T PRK07832        150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPE  219 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHH
Confidence            35 7787666554       246899999999999877421100      0000000000          0012347899


Q ss_pred             HHHHHHHHHhcC
Q 023078          194 DLARAFVQVLGN  205 (287)
Q Consensus       194 Dva~~~~~~~~~  205 (287)
                      |+|++++.++.+
T Consensus       220 ~vA~~~~~~~~~  231 (272)
T PRK07832        220 KAAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999964

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1e-10  Score=91.99  Aligned_cols=161  Identities=17%  Similarity=0.191  Sum_probs=108.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|.||.++++.|.++ ++|++++|+..                      .+++|+++.++++++++.. ++|++||+
T Consensus         6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999 99999988632                      2578999999988887754 69999999


Q ss_pred             cCCCcc--------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           80 NGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        80 a~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      +|....                    +..++.+++    ++..+++++||.....           +......| .+|..
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~~sK~a  131 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PIPGGASAATVNGA  131 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CCCCchHHHHHHHH
Confidence            986321                    122334332    2345788888765321           11112235 78887


Q ss_pred             HHHHHH------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          135 TESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       135 ~E~~~~------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      .+.+.+      ..++++..++||.+-.+.      .    .  .+..+  .+     ..++..+|+|+++..++... .
T Consensus       132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~------~----~--~~~~~--~~-----~~~~~~~~~a~~~~~~~~~~-~  191 (199)
T PRK07578        132 LEGFVKAAALELPRGIRINVVSPTVLTESL------E----K--YGPFF--PG-----FEPVPAARVALAYVRSVEGA-Q  191 (199)
T ss_pred             HHHHHHHHHHHccCCeEEEEEcCCcccCch------h----h--hhhcC--CC-----CCCCCHHHHHHHHHHHhccc-e
Confidence            776553      357999999999774331      0    0  00101  11     23578999999999988764 3


Q ss_pred             CCceEEe
Q 023078          209 SRQVFNI  215 (287)
Q Consensus       209 ~~~~~~~  215 (287)
                      .|++|++
T Consensus       192 ~g~~~~~  198 (199)
T PRK07578        192 TGEVYKV  198 (199)
T ss_pred             eeEEecc
Confidence            5677765

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.25  E-value=3.7e-10  Score=93.34  Aligned_cols=203  Identities=15%  Similarity=0.122  Sum_probs=120.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~v   76 (287)
                      ||| |.||+++++.|. +|++|++++|+..+..+..     ..+.....++.++.+|++|.+++.++++.    ..+|++
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-----KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            676 689999999996 7999999999865422111     11111124678899999999888877753    258999


Q ss_pred             EEccCCCc-------------cchHHHHHhC----CCCCcEEEEeeeeEeecCC-C------C-CCCCCC--------C-
Q 023078           77 YDINGREA-------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSD-L------L-PHCETD--------T-  122 (287)
Q Consensus        77 i~~a~~~~-------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~-~------~-~~~e~~--------~-  122 (287)
                      ||++|...             .+..++++++    +...+.|++||........ .      . ......        + 
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            99998632             1233334432    2224567777765432110 0      0 000000        0 


Q ss_pred             --CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch---hHHHHHHHHcCCCcccCCCCCceeee
Q 023078          123 --VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       123 --~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                        ..+...| .+|...+.+.+       ..+++++.+.||.+..+.....+   .......+....+         ..-+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP---------AGRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC---------cccC
Confidence              0122346 89998776642       35899999999998776321100   0011111111111         1135


Q ss_pred             eeHHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ...+|+|+++..++...  ...|..+.+.++.
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            77899999999988643  2367778877664

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.24  E-value=6.5e-11  Score=99.67  Aligned_cols=152  Identities=14%  Similarity=0.041  Sum_probs=100.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||||.||.++++.|+++|++|++++|+.++..+...     ++...  ..++.++.+|+.+.+++.++++.     ..+
T Consensus        20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA-----AIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999998765322111     11111  23678899999999888877653     258


Q ss_pred             cEEEEccCCCcc-------------------c----hHHHHHhCC-CCCcEEEEeeeeEee-cCCCCCCCCCCCCCCCcc
Q 023078           74 DVVYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~-~~~~~~~~e~~~~~p~~~  128 (287)
                      |++||+||....                   +    +..++..++ +..++|++||...+. ........+.....+...
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  174 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA  174 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence            999999986311                   1    122333333 446899999976432 211112222222333445


Q ss_pred             c-cchHHHHHHHH---------hcCCcEEEEccCceecC
Q 023078          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~  157 (287)
                      | .+|...+.+.+         ..++.+..+.||.+..+
T Consensus       175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            6 89988776542         13689999999988665

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.24  E-value=5.9e-11  Score=97.27  Aligned_cols=198  Identities=11%  Similarity=0.081  Sum_probs=120.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccC-CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~   78 (287)
                      |||+|.+|+++++.|+++|++|++++|+..+.....     ..+.. ...++.++.+|+++++++.++++.. .+|.+||
T Consensus        13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   87 (259)
T PRK06125         13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA-----ADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN   87 (259)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            699999999999999999999999999865532111     01111 1246788999999999888877643 5999999


Q ss_pred             ccCCCcc--------------------chHHHH----HhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           79 INGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        79 ~a~~~~~--------------------~~~~l~----~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      ++|....                    +...+.    ..++  +..++|++||....           .+......| .+
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~y~as  156 (259)
T PRK06125         88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYICGSAG  156 (259)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchHhHHH
Confidence            9986321                    112222    2233  34578988876431           011112235 77


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc---CCC--cccCCCCCceeeeeeHHHHHHHH
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRP--IPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      |...+.+.+       ..+++++.+.||.+..+.     ...+...-..   +.+  ...........-+..++|+|+++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR-----MLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHH-----HHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence            887776653       358999999999886652     1111100000   000  00000000011356789999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCC
Q 023078          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +.++...  ...|..+.+.++.
T Consensus       232 ~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        232 AFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHcCchhccccCceEEecCCe
Confidence            9988653  2367778887664

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.24  E-value=2.1e-10  Score=92.80  Aligned_cols=171  Identities=14%  Similarity=0.078  Sum_probs=107.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCC--hHHHHhhhc----c--C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~--~~~~~~~~~----~--~   71 (287)
                      |||+|++|+++++.|+++|++|++++|+........     ..+.. ....+.++.+|+.+  .+++.++++    .  .
T Consensus        12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~   86 (239)
T PRK08703         12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVY-----DAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG   86 (239)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHH-----HHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999876422111     01110 12345677889865  333333321    1  2


Q ss_pred             CccEEEEccCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      .+|.|||++|...                     .+..++++++    .  +..+++++||.....           +..
T Consensus        87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~  155 (239)
T PRK08703         87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----------PKA  155 (239)
T ss_pred             CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------CCC
Confidence            6899999998521                     1122233332    2  456899998854310           111


Q ss_pred             CCccc-cchHHHHHHHH----h---c-CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE----S---K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~----~---~-~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ....| .+|...+.+++    +   . +++++.++||.+.+|.....         ..       +  .....+...+|+
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---------~~-------~--~~~~~~~~~~~~  217 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---------HP-------G--EAKSERKSYGDV  217 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---------CC-------C--CCccccCCHHHH
Confidence            12235 99999888763    1   2 58999999999988832100         00       1  111245688999


Q ss_pred             HHHHHHHhcC
Q 023078          196 ARAFVQVLGN  205 (287)
Q Consensus       196 a~~~~~~~~~  205 (287)
                      +..+..++..
T Consensus       218 ~~~~~~~~~~  227 (239)
T PRK08703        218 LPAFVWWASA  227 (239)
T ss_pred             HHHHHHHhCc
Confidence            9999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.24  E-value=1.9e-10  Score=92.01  Aligned_cols=172  Identities=13%  Similarity=0.126  Sum_probs=113.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|.||+++++.|+++|++|++++|+.++......          ..++.++.+|+++++++.++++..  .+|++||
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            7999999999999999999999999998655221111          124678899999999888877632  5899999


Q ss_pred             ccCCCc--------------cc-----------hHHHH----HhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           79 INGREA--------------DE-----------VEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        79 ~a~~~~--------------~~-----------~~~l~----~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +++...              +.           ...++    ..++...++|++||...               .....|
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y  140 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAE  140 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCcccc
Confidence            986310              00           11122    22233358999988530               012236


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.+.||.+..+.         .... .  ..          +.-..+|+++++..
T Consensus       141 ~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---------~~~~-~--~~----------p~~~~~~ia~~~~~  198 (223)
T PRK05884        141 AAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG---------YDGL-S--RT----------PPPVAAEIARLALF  198 (223)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh---------hhhc-c--CC----------CCCCHHHHHHHHHH
Confidence             88998887653       357999999999875441         0110 0  00          11267999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  -.|+++.+.++.
T Consensus       199 l~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        199 LTTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             HcCchhhccCCcEEEeCCCe
Confidence            886532  267777776664

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.24  E-value=1e-10  Score=86.05  Aligned_cols=131  Identities=20%  Similarity=0.170  Sum_probs=100.7

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      .||||-.|+.|++++++.+  .+|+++.|++......            ...+.....|....+++.+.++  ++|+.+.
T Consensus        24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc   89 (238)
T KOG4039|consen   24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC   89 (238)
T ss_pred             EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence            4999999999999999987  5899999986332111            3567777889888888888888  9999999


Q ss_pred             ccCCCcc-------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           79 INGREAD-------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        79 ~a~~~~~-------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +.|....             -...+.++++  |+++|+.+||.++-            +. ..-.| +.|-+.|+-+.+.
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd------------~s-SrFlY~k~KGEvE~~v~eL  156 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD------------PS-SRFLYMKMKGEVERDVIEL  156 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC------------cc-cceeeeeccchhhhhhhhc
Confidence            8776422             2455666666  99999999998761            11 11125 8899999988777


Q ss_pred             CC-cEEEEccCceecCC
Q 023078          143 GV-NWTSLRPVYIYGPL  158 (287)
Q Consensus       143 ~~-~~~ilr~~~v~g~~  158 (287)
                      .+ +++|+|||.+.|..
T Consensus       157 ~F~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  157 DFKHIIILRPGPLLGER  173 (238)
T ss_pred             cccEEEEecCcceeccc
Confidence            66 69999999999975

>PRK05855 short chain dehydrogenase; Validated

Probab=99.24  E-value=2.8e-11  Score=110.58  Aligned_cols=141  Identities=16%  Similarity=0.097  Sum_probs=99.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|.++|++|++++|+..+..+..     ........++.++.+|++|.+++.++++..     .+|+
T Consensus       321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTA-----ELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999865522111     111111346788999999998888777632     4899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +..++.++    +.  + ..++|++||...|....           ....
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~~~  464 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-----------SLPA  464 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC-----------CCcH
Confidence            9999987321                    12233333    22  2 35899999988764321           1234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecC
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~  157 (287)
                      | .+|.+.+.+.+       ..|++++.++||.+-.+
T Consensus       465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence            6 89998877652       35899999999988654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.2e-10  Score=93.25  Aligned_cols=160  Identities=16%  Similarity=0.079  Sum_probs=107.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---CCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~d~vi   77 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+ +.          ..+++++.+|+++.+.+.+++..   ..+|+||
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQ----------ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HH----------hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            7999999999999999999999999998654221 11          13567899999999888876432   3589999


Q ss_pred             EccCCCc----------------------cchHHHHHhCC-----CCCcEEEEeeee-EeecCCCCCCCCCCCCCCCccc
Q 023078           78 DINGREA----------------------DEVEPILDALP-----NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        78 ~~a~~~~----------------------~~~~~l~~a~~-----~~~~~i~~Ss~~-~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |+++...                      .++.++++++.     ...+++++||.. .++...         ..+...|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~~~~Y  146 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---------GTTGWLY  146 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------CCCcccc
Confidence            9988631                      11233443332     234788888864 333211         1111235


Q ss_pred             -cchHHHHHHHHh-----cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 -KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 -~~k~~~E~~~~~-----~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                       .+|...+.+++.     .+++++.++||.+..+...                     +    ...+..++.++.+..++
T Consensus       147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~  201 (222)
T PRK06953        147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVI  201 (222)
T ss_pred             HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHH
Confidence             889988887643     3678999999988665210                     0    11356788888888876


Q ss_pred             cC
Q 023078          204 GN  205 (287)
Q Consensus       204 ~~  205 (287)
                      ..
T Consensus       202 ~~  203 (222)
T PRK06953        202 AQ  203 (222)
T ss_pred             Hh
Confidence            54

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=2e-10  Score=96.40  Aligned_cols=189  Identities=15%  Similarity=0.121  Sum_probs=114.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|+||+++++.|+++|++|++.+++.....+...    ..+.....++.++.+|+.+.+++.++++.    -.+|++
T Consensus        18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~----~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVL----DEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHH----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999999999876432111110    11112234678899999998888777653    258999


Q ss_pred             EEccCCCcc--------------------chHHHHHhC----C-C--------CCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           77 YDINGREAD--------------------EVEPILDAL----P-N--------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~a~----~-~--------~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      ||++|....                    +...+++++    + .        ..++|++||...+...           
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  162 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP-----------  162 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----------
Confidence            999986321                    222333332    1 1        1489999987643211           


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      .....| .+|...+.+.+       .+++++..+.|+.  ..    .+.....    ...+ ..   .......+.++|+
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t----~~~~~~~----~~~~-~~---~~~~~~~~~pe~v  228 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RT----AMTADVF----GDAP-DV---EAGGIDPLSPEHV  228 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CC----chhhhhc----cccc-hh---hhhccCCCCHHHH
Confidence            111235 89998887653       3688999999972  11    1110000    0000 00   0011234578999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCC
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~  218 (287)
                      +.++..++...  ...|++|.+.++
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCC
Confidence            99998887642  235677777544

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=2.7e-10  Score=92.66  Aligned_cols=172  Identities=14%  Similarity=0.133  Sum_probs=107.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCC--ChHHHHhhhcc-----CC
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRK--DYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~--~~~~~~~~~~~-----~~   72 (287)
                      |||+|+||.++++.|+++|++|++++|+..+..+..     .++... ..++.++.+|++  +.+++.++++.     ..
T Consensus        18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY-----DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999875422111     011111 235677888886  44444443321     16


Q ss_pred             ccEEEEccCCCc---------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|.|||+++...                     .+..+++++    ++  +..+||++||.....+.           ..
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----------~~  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-----------AN  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC-----------CC
Confidence            899999997521                     122233333    22  56789999997543111           11


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      ...| .+|...+.+++       ..+++++.++|+.+-.+.....+         ..         .....+...+|+++
T Consensus       162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~---------~~---------~~~~~~~~~~~~~~  223 (247)
T PRK08945        162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF---------PG---------EDPQKLKTPEDIMP  223 (247)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc---------Cc---------ccccCCCCHHHHHH
Confidence            2235 88988887763       23688999999877554210000         00         00123567899999


Q ss_pred             HHHHHhcCC
Q 023078          198 AFVQVLGNE  206 (287)
Q Consensus       198 ~~~~~~~~~  206 (287)
                      ++..++...
T Consensus       224 ~~~~~~~~~  232 (247)
T PRK08945        224 LYLYLMGDD  232 (247)
T ss_pred             HHHHHhCcc
Confidence            999988653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.19  E-value=2.2e-09  Score=87.60  Aligned_cols=190  Identities=9%  Similarity=0.039  Sum_probs=118.5

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+  +-||+.+++.|+++|++|++.+|+... .+.+.     +..  ...+.++.+|+++++++.++++.     -.+
T Consensus        13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~-----~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079         13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQ-----KLV--DEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHH-----hhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            7998  799999999999999999999987321 11111     000  23577899999998887776543     258


Q ss_pred             cEEEEccCCCcc------------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||++|....                        +    ++.++..++...++|++||......           ...
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----------~~~  153 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA-----------IPN  153 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-----------CCc
Confidence            999999985310                        0    1112222333357899988653110           011


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..|+++..+.||.+-.+...... .....+...+..+         ..-+..++|+|
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva  224 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV---------DGVGVTIEEVG  224 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCc---------ccCCCCHHHHH
Confidence            2235 89998887753       36899999999998665311100 1112222222111         11356789999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCC
Q 023078          197 RAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~  218 (287)
                      +++..++...  .-.|+++.+.++
T Consensus       225 ~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        225 NTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHhCcccccccccEEEeCCc
Confidence            9999998753  235677777655

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.18  E-value=5.1e-10  Score=91.59  Aligned_cols=193  Identities=15%  Similarity=0.092  Sum_probs=117.1

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCcccc-------ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIA-------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   71 (287)
                      |||+|  .||.++++.|+++|++|+++.|......       .... .......+...++.++.+|+++.+++.++++..
T Consensus        12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~   90 (256)
T PRK12859         12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQI-QLQEELLKNGVKVSSMELDLTQNDAPKELLNKV   90 (256)
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            79985  7999999999999999998765321100       0000 001112222356788899999998887777532


Q ss_pred             -----CccEEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCC
Q 023078           72 -----GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        72 -----~~d~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~  120 (287)
                           .+|++||++|....                    +    .+.++..++  +..++|++||.....          
T Consensus        91 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------  160 (256)
T PRK12859         91 TEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG----------  160 (256)
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC----------
Confidence                 48999999986321                    1    122233333  346899999975421          


Q ss_pred             CCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       121 ~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                       +..+...| .+|...+.+.+       ..+++++.++||.+-.+...    ......+....+         ...+...
T Consensus       161 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~----~~~~~~~~~~~~---------~~~~~~~  226 (256)
T PRK12859        161 -PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT----EEIKQGLLPMFP---------FGRIGEP  226 (256)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC----HHHHHHHHhcCC---------CCCCcCH
Confidence             11122346 88998887652       35899999999987655311    111111111111         1123568


Q ss_pred             HHHHHHHHHHhcCC--cCCCceEEeeCC
Q 023078          193 KDLARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       193 ~Dva~~~~~~~~~~--~~~~~~~~~~~~  218 (287)
                      +|+|+++..++...  ...|+.+.+.++
T Consensus       227 ~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        227 KDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            99999999887653  225666666554

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.17  E-value=2.5e-10  Score=93.69  Aligned_cols=192  Identities=15%  Similarity=0.176  Sum_probs=117.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+...        ....++..+.+|+.+.+++.++++.     ..+|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325        11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA--------AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654222111        0124577889999998877776653     26899


Q ss_pred             EEEccCCCc-------------------------cchHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           76 VYDINGREA-------------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~-------------------------~~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +||++|...                         .+...+++++    . ...++|++||...+...           ..
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  151 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-----------GG  151 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-----------CC
Confidence            999998521                         0112233332    1 23578888886543111           11


Q ss_pred             Cccc-cchHHHHHHHH----h--cCCcEEEEccCceecCCCCCchh---H----HH-HHHHHcCCCcccCCCCCceeeee
Q 023078          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVE---E----WF-FHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~~~---~----~~-~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      ...| .+|...+.+.+    +  ..+++..+.||.+..+.......   .    .. .....+. .++       ..-+.
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-------~~r~~  223 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP-------IGRMP  223 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-------CCCCC
Confidence            2235 89999887763    2  23889999999987663211000   0    00 0000000 000       11345


Q ss_pred             eHHHHHHHHHHHhcCCc---CCCceEEeeCCC
Q 023078          191 HVKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~---~~~~~~~~~~~~  219 (287)
                      ..+|+|+++..++....   ..|..+.+.++.
T Consensus       224 ~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       224 DAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             ChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            68999999988876522   367777776653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.13  E-value=1.5e-09  Score=90.29  Aligned_cols=194  Identities=18%  Similarity=0.130  Sum_probs=116.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc-----cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----   70 (287)
                      |||++.||..+++.|+++|++|++++|+....     .+.+.. ...++.....++.++.+|++|.+++.++++.     
T Consensus        12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (286)
T PRK07791         12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQA-VVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF   90 (286)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHH-HHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999999999998765110     000000 0011111234577889999998887776643     


Q ss_pred             CCccEEEEccCCCcc--------------------ch----HHHHHhCC-C-------CCcEEEEeeeeEeecCCCCCCC
Q 023078           71 KGFDVVYDINGREAD--------------------EV----EPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~--------------------~~----~~l~~a~~-~-------~~~~i~~Ss~~~y~~~~~~~~~  118 (287)
                      -.+|++||++|....                    +.    +.++..+. .       ..++|++||...+...      
T Consensus        91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------  164 (286)
T PRK07791         91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS------  164 (286)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC------
Confidence            268999999986321                    11    11222221 1       2489999987642111      


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                           .....| .+|.+.+.+.+       ..++++..+.|+ +..+     +............+       .....+.
T Consensus       165 -----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~~~~~~~~~~~~-------~~~~~~~  226 (286)
T PRK07791        165 -----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-----MTETVFAEMMAKPE-------EGEFDAM  226 (286)
T ss_pred             -----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-----cchhhHHHHHhcCc-------ccccCCC
Confidence                 012235 88988877653       368999999998 4222     11111111111111       1111346


Q ss_pred             eHHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          191 HVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ..+|+|++++.++...  ...|+.+.+.++.
T Consensus       227 ~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        227 APENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            7899999999988653  2367777777664

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.12  E-value=8.3e-09  Score=83.26  Aligned_cols=178  Identities=15%  Similarity=0.104  Sum_probs=110.9

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi   77 (287)
                      |||+|+||+++++.|++++  ..|.+..|+....   ..          ..++.++++|+++.+++.++.+.. ++|++|
T Consensus         6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999985  5666666654321   11          357788999999988776654422 689999


Q ss_pred             EccCCCcc------c------------------------hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           78 DINGREAD------E------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        78 ~~a~~~~~------~------------------------~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++|....      .                        ++.++..++  +..+++++||..  +...     . ....+
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~-----~-~~~~~  144 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSIS-----D-NRLGG  144 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccc-----c-CCCCC
Confidence            99987421      0                        112233343  345788888642  1110     0 01112


Q ss_pred             Cccc-cchHHHHHHHH-------h--cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~--~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ...| .+|...+.+.+       .  .++.+..+.||.+..+....         .....         ....+...+|+
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~---------~~~~~~~~~~~  206 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNV---------PKGKLFTPEYV  206 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhcc---------ccCCCCCHHHH
Confidence            2235 88998887653       1  37888999999887663210         00100         11225788999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeC
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISG  217 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~  217 (287)
                      |+++..++....  ..|..+.+.+
T Consensus       207 a~~~~~l~~~~~~~~~g~~~~~~g  230 (235)
T PRK09009        207 AQCLLGIIANATPAQSGSFLAYDG  230 (235)
T ss_pred             HHHHHHHHHcCChhhCCcEEeeCC
Confidence            999999997643  2555555543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.10  E-value=5.3e-09  Score=85.66  Aligned_cols=194  Identities=11%  Similarity=0.065  Sum_probs=117.2

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccc--cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----   71 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----   71 (287)
                      |||+  +-||+.+++.|+++|++|++..|+.+..  .+.+     .++.+....+.++.+|++|++++.++++..     
T Consensus        12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (258)
T PRK07370         12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKV-----RELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWG   86 (258)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHH-----HHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence            6875  7999999999999999998887654321  1001     111111234668899999998888776532     


Q ss_pred             CccEEEEccCCCc-----c-------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 ~~d~vi~~a~~~~-----~-------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      .+|++||++|...     .                   +    ++.++..++...++|++||......           .
T Consensus        87 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~  155 (258)
T PRK07370         87 KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA-----------I  155 (258)
T ss_pred             CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC-----------C
Confidence            6899999998631     0                   1    1222222333368999998653210           0


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .....| .+|...+.+.+       ..+++++.+.||.+-.+..... -.+..........+         ..-+...+|
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~d  226 (258)
T PRK07370        156 PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP---------LRRTVTQTE  226 (258)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC---------cCcCCCHHH
Confidence            112235 89998887653       3579999999998866521000 00111111111111         113566799


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++++..++....  -.|+.+.+.++.
T Consensus       227 va~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        227 VGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHHHhChhhccccCcEEEECCcc
Confidence            9999999887532  256777776653

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.09  E-value=8.1e-10  Score=89.53  Aligned_cols=185  Identities=13%  Similarity=0.103  Sum_probs=112.7

Q ss_pred             HHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEEccCCC-----
Q 023078           11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGRE-----   83 (287)
Q Consensus        11 l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~~a~~~-----   83 (287)
                      +++.|+++|++|++++|+..+.                ...+++.+|++|.+++.++++..  ++|++||+||..     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence            4688999999999999986541                11346789999999998888742  689999999863     


Q ss_pred             -------ccchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCC----------------CCCCCCccc-cchHHH
Q 023078           84 -------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDPKSRH-KGKLNT  135 (287)
Q Consensus        84 -------~~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~----------------~~~~p~~~~-~~k~~~  135 (287)
                             ..+...+.+++    +...++|++||...|+.....+..+.                .+..+...| .+|...
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence                   22233344442    33469999999988753221111110                112223446 899888


Q ss_pred             HHHH--------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          136 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       136 E~~~--------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      +.+.        ...|++++.++||.+.++.... ...............       ....+...+|+|+++..++....
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSDAK-------RMGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhccc-------ccCCCCCHHHHHHHHHHHcChhh
Confidence            7553        2357999999999998874211 100000000000000       01124678999999999886432


Q ss_pred             --CCCceEEeeCCC
Q 023078          208 --ASRQVFNISGEK  219 (287)
Q Consensus       208 --~~~~~~~~~~~~  219 (287)
                        ..|+...+.++.
T Consensus       217 ~~~~G~~i~vdgg~  230 (241)
T PRK12428        217 RWINGVNLPVDGGL  230 (241)
T ss_pred             cCccCcEEEecCch
Confidence              256666666553

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.09  E-value=2.6e-09  Score=86.68  Aligned_cols=70  Identities=19%  Similarity=0.190  Sum_probs=55.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|.||+++++.|+++|++|++++|+.........          ......+.+|+++.+++.+.+.  ++|++||+|
T Consensus        20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA   87 (245)
T PRK12367         20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEESLDKQLA--SLDVLILNH   87 (245)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence            7999999999999999999999999997632111100          1123567899999999988887  899999999


Q ss_pred             CC
Q 023078           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      |.
T Consensus        88 G~   89 (245)
T PRK12367         88 GI   89 (245)
T ss_pred             cc
Confidence            86

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.06  E-value=1.8e-08  Score=75.67  Aligned_cols=195  Identities=16%  Similarity=0.186  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc---ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+.-||+++++.|.++|++|.+.+++...+.   ..++.         ..+-.-+.+|..+..+++..+++.     .
T Consensus        20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---------~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---------YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---------CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999998776532   22221         124456789999877666655431     6


Q ss_pred             ccEEEEccCCCccc------------------------hHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~~------------------------~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      ++++++|||.+.++                        ++..++++-    +.-++|.+||+-  |.-... ........
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV--GkiGN~-GQtnYAAs  167 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV--GKIGNF-GQTNYAAS  167 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh--cccccc-cchhhhhh
Confidence            99999999986543                        222333311    223799999863  211110 00000111


Q ss_pred             CCcc-ccchHHHHHHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          125 PKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       125 p~~~-~~~k~~~E~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      ..+. .-+|.++.++ ...++++..+.||.+-.|- ...+.+.+...+....|.-..++         .+|+|..+..+.
T Consensus       168 K~GvIgftktaArEl-a~knIrvN~VlPGFI~tpM-T~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~fLA  236 (256)
T KOG1200|consen  168 KGGVIGFTKTAAREL-ARKNIRVNVVLPGFIATPM-TEAMPPKVLDKILGMIPMGRLGE---------AEEVANLVLFLA  236 (256)
T ss_pred             cCceeeeeHHHHHHH-hhcCceEeEeccccccChh-hhhcCHHHHHHHHccCCccccCC---------HHHHHHHHHHHh
Confidence            1111 2445554444 4578999999999987773 23334456666666655533333         688999998888


Q ss_pred             cCCcC--CCceEEeeCC
Q 023078          204 GNEKA--SRQVFNISGE  218 (287)
Q Consensus       204 ~~~~~--~~~~~~~~~~  218 (287)
                      .....  .|..+.++++
T Consensus       237 S~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  237 SDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccccccceeEEEecc
Confidence            54332  5677777765

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.06  E-value=1.1e-08  Score=83.92  Aligned_cols=193  Identities=11%  Similarity=0.116  Sum_probs=116.4

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||  ++-||+++++.|+++|++|++..|.... .+.+     .++.........+++|++|.+++.++++.     -++
T Consensus        12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690         12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERV-----RKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHH-----HHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            686  6799999999999999999998775321 1111     01111112345789999999888777653     269


Q ss_pred             cEEEEccCCCcc---------c----------------hHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD---------E----------------VEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        74 d~vi~~a~~~~~---------~----------------~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      |++||++|....         .                ...+.++    ++ +..++|++||......           .
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~-----------~  154 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA-----------I  154 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC-----------C
Confidence            999999986421         0                0011111    22 2357888888654211           0


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .....| .+|...+.+.+       .+++++..+.||.+-.+...... .......+.+..+         ..-+..++|
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pee  225 (261)
T PRK08690        155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP---------LRRNVTIEE  225 (261)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC---------CCCCCCHHH
Confidence            112235 88998887653       46899999999988665211000 0111111111111         113567899


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +|+++..++....  ..|..+.+.++.
T Consensus       226 vA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        226 VGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            9999999997532  367777777664

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.05  E-value=1.2e-08  Score=84.07  Aligned_cols=193  Identities=13%  Similarity=0.150  Sum_probs=116.9

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||++  -||+.+++.|+++|++|++.+|+.... +.+     .++.........+.+|++|.+++.++++.     -.+
T Consensus        13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~-----~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505         13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRV-----KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHH-----HHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            79996  999999999999999999998864321 111     01110011234688999999888777653     268


Q ss_pred             cEEEEccCCCcc------------------------chHHH----HHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l----~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        +...+    +..++...++|++||......           ...
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~-----------~~~  155 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV-----------MPN  155 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc-----------CCc
Confidence            999999985320                        01112    222332357899988653210           011


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       .+|+++..+.||.+-.+...... ............++         .-+...+|+|
T Consensus       156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peeva  226 (271)
T PRK06505        156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRTVTIDEVG  226 (271)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------cccCCHHHHH
Confidence            1235 89998877653       35899999999988765311100 00111111111111         1245689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++....  ..|+.+.+.++.
T Consensus       227 ~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        227 GSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHHHhCccccccCceEEeecCCc
Confidence            99999887532  367778877664

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.05  E-value=1.6e-08  Score=82.75  Aligned_cols=192  Identities=10%  Similarity=0.079  Sum_probs=116.3

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc-----C
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----K   71 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~-----~   71 (287)
                      |||+  +-||.++++.|+++|++|++.+|+.... +.+     .++...  ..++.++.+|++|++++.++++.     -
T Consensus        13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594         13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEV-----RELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHH-----HHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            6887  8999999999999999999988753221 111     011110  24677889999999887776652     2


Q ss_pred             CccEEEEccCCCc-----c-------------------ch----HHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREA-----D-------------------EV----EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 ~~d~vi~~a~~~~-----~-------------------~~----~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      .+|++||++|...     .                   +.    +.++..++...++|++||....-           ..
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~  155 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----------VV  155 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------CC
Confidence            5899999988531     0                   01    11222233335899999865311           00


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .....| .+|...+.+.+       ..++++..+.||.+-.+.... .-.........+..         ....+...+|
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~~  226 (257)
T PRK08594        156 QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERA---------PLRRTTTQEE  226 (257)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcC---------CccccCCHHH
Confidence            112236 89999887753       358999999999886652100 00001111111110         1123567899


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +|++++.++....  ..|..+.+.++
T Consensus       227 va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        227 VGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHHHcCcccccccceEEEECCc
Confidence            9999999887533  25677777655

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.05  E-value=1.1e-08  Score=83.98  Aligned_cols=193  Identities=15%  Similarity=0.116  Sum_probs=115.9

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||++  -||+++++.|+++|++|++.+|+... .+..     .++.........+.+|++|++++.++++.     -.+
T Consensus        12 TGas~~~GIG~aia~~la~~G~~vil~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984         12 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRV-----EEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             eCCCCCccHHHHHHHHHHHCCCEEEEEecchhH-HHHH-----HHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            78885  89999999999999999988886321 1111     01111113456789999999888877753     158


Q ss_pred             cEEEEccCCCcc-------------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD-------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |++||++|....                         +...+.++    ++...++|++||.+...            ..
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~------------~~  153 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------AI  153 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC------------CC
Confidence            999999985311                         00112222    12235788888865310            11


Q ss_pred             C-Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          125 P-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       125 p-~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      | ...| .+|...+.+.+       ..++++..+.||.+-.+.... .-............+         ..-+...+|
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~ped  224 (262)
T PRK07984        154 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP---------IRRTVTIED  224 (262)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCC---------CcCCCCHHH
Confidence            1 1236 89999887753       358999999999885542100 000011111111111         113567899


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      +++++..++...  ...|..+.+.++..
T Consensus       225 va~~~~~L~s~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        225 VGNSAAFLCSDLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             HHHHHHHHcCcccccccCcEEEECCCcc
Confidence            999999988753  23677777776643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.05  E-value=1.9e-09  Score=95.50  Aligned_cols=190  Identities=17%  Similarity=0.182  Sum_probs=115.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||..+++.|.++|++|++++|+....  .+     ..... ..+..++.+|+++.+++.++++..     .+|+
T Consensus       216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~--~l-----~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGE--AL-----AAVAN-RVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH--HH-----HHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            79999999999999999999999998853321  00     00000 124467899999998877766532     5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||++|....                    +..++.+++.      ...+||++||...+.+..           ....|
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----------~~~~Y  356 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----------GQTNY  356 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------CChHH
Confidence            9999986321                    2333333332      336899999876432111           11235


Q ss_pred             -cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.       +..++.+..+.||.+-.+.. .. .+.......+.  ..      ........+|+++++..
T Consensus       357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-~~-~~~~~~~~~~~--~~------~l~~~~~p~dva~~~~~  426 (450)
T PRK08261        357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT-AA-IPFATREAGRR--MN------SLQQGGLPVDVAETIAW  426 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-hc-cchhHHHHHhh--cC------CcCCCCCHHHHHHHHHH
Confidence             8888666554       24689999999998643311 10 11111111110  00      01112346799999998


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  -+|+.+.+.++.
T Consensus       427 l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        427 LASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             HhChhhcCCCCCEEEECCCc
Confidence            886432  257788876643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.04  E-value=1.6e-08  Score=82.81  Aligned_cols=192  Identities=13%  Similarity=0.090  Sum_probs=115.9

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+  +-||.++++.|+++|++|++.+|+.+.. +.+     .+.......+.++.+|++|.+++.++++.     -.+
T Consensus        16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYV-----EPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHH-----HHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6887  4999999999999999999999875321 101     01111112346789999999888776653     158


Q ss_pred             cEEEEccCCCcc------------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||++|....                        +    ++.++..++...++|++||.....     +      ...
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----~------~~~  158 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----V------VEN  158 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----C------Ccc
Confidence            999999986321                        0    112222233335788888864310     0      011


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..++++..+.||.+-.+.... .......+...+..+         ..-+...+|+|
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva  229 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAP---------LRRLVDIDDVG  229 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCC---------cCCCCCHHHHH
Confidence            2235 88988776653       368999999999886652110 000111122221111         11346789999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCC
Q 023078          197 RAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~  218 (287)
                      ++++.++...  ...|+.+.+.++
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        230 AVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHhChhhccccCcEEeeCCc
Confidence            9999988653  236777777655

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.04  E-value=4.8e-10  Score=90.87  Aligned_cols=191  Identities=23%  Similarity=0.296  Sum_probs=122.8

Q ss_pred             Ccc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCc
Q 023078            2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF   73 (287)
Q Consensus         2 Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~   73 (287)
                      |++  +-||..+++.|+++|++|++.+|+.++..+.+.     ++.+ ..+.+++.+|+++++++.++++.      -++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~-----~l~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALE-----ELAK-EYGAEVIQCDLSDEESVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHH-----HHHH-HTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHH-HcCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence            666  999999999999999999999999876321111     1111 12355799999998887777543      379


Q ss_pred             cEEEEccCCCcc----c------------------------hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD----E------------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~----~------------------------~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+++....    .                        .+.++..++...++|++||.....           +...
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-----------~~~~  143 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-----------PMPG  143 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS-----------BSTT
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc-----------cCcc
Confidence            999999876432    0                        111222222346789999875311           1111


Q ss_pred             Cccc-cchHHHHHHHH-------h-cCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~-~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ...| .+|...+.+.+       . +|+++..|.||.+..+.... .....+.....+..++         .-+...+|+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl---------~r~~~~~ev  214 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL---------GRLGTPEEV  214 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT---------SSHBEHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhcc---------CCCcCHHHH
Confidence            2245 88888887653       4 78999999999886552100 0012233333333222         124579999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCC
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~  218 (287)
                      |+++..++...  .-+|+.+.+.+|
T Consensus       215 A~~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  215 ANAVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHHHhCccccCccCCeEEECCC
Confidence            99999999764  337888888776

...

>PRK06484 short chain dehydrogenase; Validated

Probab=99.04  E-value=2.8e-09  Score=96.23  Aligned_cols=177  Identities=16%  Similarity=0.207  Sum_probs=111.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||..+++.|+++|++|++++|+.....+..        .+...++.++.+|+++++++.++++.     -.+|+
T Consensus        11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484         11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARERA--------DSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999866532211        11124567889999999888777754     25899


Q ss_pred             EEEccCCCc-------c---------------chHHH----HHhCC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREA-------D---------------EVEPI----LDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~-------~---------------~~~~l----~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +||++|...       +               +...+    +..+.  +. .++|++||........           ..
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~-----------~~  151 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP-----------KR  151 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC-----------CC
Confidence            999998621       0               11222    22222  22 3899999876532111           11


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH-HH-HHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ..| .+|...+.+.+       ..+++++.+.||.+-.+........ .. .......  ++       ...+...+|++
T Consensus       152 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va  222 (520)
T PRK06484        152 TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR--IP-------LGRLGRPEEIA  222 (520)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc--CC-------CCCCcCHHHHH
Confidence            235 88998887653       3579999999998765531100000 00 0001100  00       11245789999


Q ss_pred             HHHHHHhcC
Q 023078          197 RAFVQVLGN  205 (287)
Q Consensus       197 ~~~~~~~~~  205 (287)
                      +++..++..
T Consensus       223 ~~v~~l~~~  231 (520)
T PRK06484        223 EAVFFLASD  231 (520)
T ss_pred             HHHHHHhCc
Confidence            999888764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.04  E-value=1.7e-09  Score=88.54  Aligned_cols=184  Identities=15%  Similarity=0.090  Sum_probs=109.2

Q ss_pred             CCcccchHHHHHHHHHH----CCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccC---
Q 023078            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~---   71 (287)
                      |||+|.||.++++.|++    +|++|++++|+.....+..     .++..  ....+.++.+|+.+.+++.++++..   
T Consensus         6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK-----AEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH-----HHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            79999999999999997    6999999999866522111     11111  1235788999999998777766421   


Q ss_pred             ------CccEEEEccCCCcc---------c------------------hHHHHHhCC---C-CCcEEEEeeeeEeecCCC
Q 023078           72 ------GFDVVYDINGREAD---------E------------------VEPILDALP---N-LEQFIYCSSAGVYLKSDL  114 (287)
Q Consensus        72 ------~~d~vi~~a~~~~~---------~------------------~~~l~~a~~---~-~~~~i~~Ss~~~y~~~~~  114 (287)
                            +.|++||++|....         .                  ++.++..++   + ..++|++||...+..   
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---  157 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---  157 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence                  23689999985210         0                  122233333   1 257999999764311   


Q ss_pred             CCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCce
Q 023078          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       115 ~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                              ......| .+|...+.+.+       ..++.++.+.||.+-.+.     ...+...................
T Consensus       158 --------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T TIGR01500       158 --------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM-----QQQVREESVDPDMRKGLQELKAK  224 (256)
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH-----HHHHHHhcCChhHHHHHHHHHhc
Confidence                    1112236 89998887653       257899999999885542     11110000000000000000001


Q ss_pred             eeeeeHHHHHHHHHHHhcC
Q 023078          187 TQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       187 ~~~i~~~Dva~~~~~~~~~  205 (287)
                      -.+..++|+|++++.++.+
T Consensus       225 ~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             CCCCCHHHHHHHHHHHHhc
Confidence            1257889999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.02  E-value=2.2e-08  Score=81.88  Aligned_cols=190  Identities=16%  Similarity=0.146  Sum_probs=114.7

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCCc-cccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CC
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~   72 (287)
                      |||  ++-||.++++.|+++|++|++.+|+.. ...+.+.       .+....+.++.+|+.|++++.++++.     -+
T Consensus        13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA-------KRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHH-------HhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            688  899999999999999999999988642 1111110       01123567899999999888777653     26


Q ss_pred             ccEEEEccCCCcc------------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +|++||++|....                        +    ++.++..++...++|++|+....             ..
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-------------~~  152 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-------------AW  152 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-------------cC
Confidence            9999999986421                        0    11122223333577877753210             01


Q ss_pred             C-Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          125 P-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       125 p-~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      | ...| .+|...+.+.+       ..|++++.+.||.+-.+..... -.......+.+..+.        .+.+...+|
T Consensus       153 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~p~e  224 (256)
T PRK07889        153 PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL--------GWDVKDPTP  224 (256)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc--------ccccCCHHH
Confidence            1 1235 88988877653       3689999999998866521100 001111111111110        013567899


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +|++++.++....  ..|.++.+.++
T Consensus       225 vA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        225 VARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHHhCcccccccceEEEEcCc
Confidence            9999999987532  25677777655

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.00  E-value=3.4e-09  Score=89.28  Aligned_cols=190  Identities=14%  Similarity=0.122  Sum_probs=111.9

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||++.||.++++.|+++| ++|++++|+..+..+..     ..+......+.++.+|+++.+++.++++.     .++|
T Consensus         9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAA-----KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-----HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 99999999876532111     01111124577889999998887776643     2599


Q ss_pred             EEEEccCCCcc---------------------c----hHHHHHhCC--C--CCcEEEEeeeeEeecCC----CCCC----
Q 023078           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSD----LLPH----  117 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~l~~a~~--~--~~~~i~~Ss~~~y~~~~----~~~~----  117 (287)
                      ++||+||....                     +    ++.++..++  +  ..++|++||...+....    ..+.    
T Consensus        84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  163 (314)
T TIGR01289        84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD  163 (314)
T ss_pred             EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence            99999986210                     0    122333333  1  36999999987653210    0000    


Q ss_pred             --------------CCCCCCCCCccc-cchHHHHHHH----Hh----cCCcEEEEccCceecCC-CCC--chhHHHHHHH
Q 023078          118 --------------CETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGPL-NYN--PVEEWFFHRL  171 (287)
Q Consensus       118 --------------~e~~~~~p~~~~-~~k~~~E~~~----~~----~~~~~~ilr~~~v~g~~-~~~--~~~~~~~~~~  171 (287)
                                    .+.....+...| .+|.+...+.    ++    .++.++.++||.+.... ...  .....+....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~  243 (314)
T TIGR01289       164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF  243 (314)
T ss_pred             cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence                          011111233336 8998854432    21    47899999999885321 111  1111111111


Q ss_pred             HcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      ..   ..       ...+...++.|+.++.++..
T Consensus       244 ~~---~~-------~~~~~~~~~~a~~l~~~~~~  267 (314)
T TIGR01289       244 QK---YI-------TKGYVSEEEAGERLAQVVSD  267 (314)
T ss_pred             HH---HH-------hccccchhhhhhhhHHhhcC
Confidence            10   00       01246788899988887765

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.00  E-value=2.1e-09  Score=82.44  Aligned_cols=140  Identities=17%  Similarity=0.171  Sum_probs=92.7

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|++|.++++.|.++|+ .|++++|++........  ....+.....++.++.+|+++.+++.++++..     .+|
T Consensus         6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (180)
T smart00822        6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE--LLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR   83 (180)
T ss_pred             EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence            69999999999999999985 68888887544211100  00111122346778899999988887776531     469


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhCC--CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCccc-c
Q 023078           75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~~--~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      .+||+++...                    .+...+++++.  +.++++++||... ++..            ....| .
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~------------~~~~y~~  151 (180)
T smart00822       84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP------------GQANYAA  151 (180)
T ss_pred             EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC------------CchhhHH
Confidence            9999998521                    13445566655  5678999998754 2211            11235 7


Q ss_pred             chHHHHHHHH---hcCCcEEEEccCce
Q 023078          131 GKLNTESVLE---SKGVNWTSLRPVYI  154 (287)
Q Consensus       131 ~k~~~E~~~~---~~~~~~~ilr~~~v  154 (287)
                      +|...+.+.+   ..+++++.+.||.+
T Consensus       152 sk~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      152 ANAFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEeeccc
Confidence            7888887763   56888888888764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.00  E-value=5.4e-09  Score=90.13  Aligned_cols=73  Identities=16%  Similarity=0.169  Sum_probs=58.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|+||+++++.|.++|++|++++|++.+......        ....++..+.+|++|.+++.+.+.  ++|++||++
T Consensus       184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--------~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--------GEDLPVKTLHWQVGQEAALAELLE--KVDILIINH  253 (406)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence            7999999999999999999999999997654321111        001246778999999999999887  899999999


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      |..
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            864

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.99  E-value=3.1e-09  Score=86.10  Aligned_cols=123  Identities=24%  Similarity=0.204  Sum_probs=85.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcC-CcEEEEecCCChHHHHhhhc-----cCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLS-----AKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~-----~~~~d   74 (287)
                      ||||.-||.+++..|.++|.+++.+.|........-. . .....  .. ++.++++|++|.+++.++++     --++|
T Consensus        18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~-~-l~~~~--~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vD   93 (282)
T KOG1205|consen   18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAE-E-LRKLG--SLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVD   93 (282)
T ss_pred             eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHH-H-HHHhC--CcCccEEEeCccCCHHHHHHHHHHHHHhcCCCC
Confidence            8999999999999999999988888887665221101 0 00111  22 58999999999988886652     13899


Q ss_pred             EEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-c
Q 023078           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~  127 (287)
                      ++||+||....                    +    ++.++..++  +..|+|.+||..-+-            ..|. +
T Consensus        94 vLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~------------~~P~~~  161 (282)
T KOG1205|consen   94 VLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM------------PLPFRS  161 (282)
T ss_pred             EEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc------------CCCccc
Confidence            99999997431                    1    344444455  447999999987531            1222 2


Q ss_pred             cc-cchHHHHHHH
Q 023078          128 RH-KGKLNTESVL  139 (287)
Q Consensus       128 ~~-~~k~~~E~~~  139 (287)
                      .| .||.+.+.+.
T Consensus       162 ~Y~ASK~Al~~f~  174 (282)
T KOG1205|consen  162 IYSASKHALEGFF  174 (282)
T ss_pred             ccchHHHHHHHHH
Confidence            46 9999988875

>PRK05599 hypothetical protein; Provisional

Probab=98.98  E-value=1.3e-08  Score=82.80  Aligned_cols=177  Identities=18%  Similarity=0.194  Sum_probs=112.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhc-CCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||++.||..+++.|. +|++|++++|+.++..+..     .++.+.. ..+.++.+|+.|.+++.++++.     -.+|
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLA-----SDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999998 5999999999876532111     1111112 2477889999998887776543     2689


Q ss_pred             EEEEccCCCcc--------------------ch----HHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      ++||++|....                    +.    ..++..+.  + ..++|++||...+-..           ....
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-----------~~~~  148 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR-----------RANY  148 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-----------cCCc
Confidence            99999986311                    00    11122232  2 3689999997542110           1122


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.+.||.+..+..            ....+.      .   -....+|+|+++
T Consensus       149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~------------~~~~~~------~---~~~~pe~~a~~~  207 (246)
T PRK05599        149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT------------TGMKPA------P---MSVYPRDVAAAV  207 (246)
T ss_pred             chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh------------cCCCCC------C---CCCCHHHHHHHH
Confidence            35 88888776653       3578999999998765510            000000      0   024689999999


Q ss_pred             HHHhcCCcCCCceEEee
Q 023078          200 VQVLGNEKASRQVFNIS  216 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~~~  216 (287)
                      +..+..... +..+.+.
T Consensus       208 ~~~~~~~~~-~~~~~~~  223 (246)
T PRK05599        208 VSAITSSKR-STTLWIP  223 (246)
T ss_pred             HHHHhcCCC-CceEEeC
Confidence            999987543 3345544

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.98  E-value=1.8e-08  Score=83.09  Aligned_cols=194  Identities=11%  Similarity=0.112  Sum_probs=115.9

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+  +-||.++++.|+++|++|++..|+... .+.+.     .+.+.......+.+|++|++++.++++.     -.+
T Consensus        16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVE-----PLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHH-----HHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6886  899999999999999999988876321 11110     1111112355689999999888877653     158


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        +...++++    +++..++|++||.+...            ..|
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------~~p  157 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK------------VMP  157 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc------------CCC
Confidence            999999985310                        11122222    23336888998864311            112


Q ss_pred             -Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 -KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 -~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       ...| .+|...+.+.+       ..++++..+.||.+..+.....-........... ..+       ..-+...+|+|
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p-------~~r~~~peevA  229 (272)
T PRK08159        158 HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEY-NAP-------LRRTVTIEEVG  229 (272)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHh-CCc-------ccccCCHHHHH
Confidence             1235 88998877653       3579999999998855411000000000000000 011       11246789999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      ++++.++...  ...|..+.+.++..
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        230 DSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHHHHHhCccccCccceEEEECCCce
Confidence            9999998753  23677888877743

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.98  E-value=4.9e-08  Score=80.07  Aligned_cols=193  Identities=10%  Similarity=0.054  Sum_probs=114.9

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||++  -||.++++.|.++|++|++..|+... .+.+     .++........++.+|++|++++.++++.     -.+
T Consensus        14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~-----~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRV-----KPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHH-----HHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            79987  79999999999999999998886321 1111     11111111234578999999888777653     258


Q ss_pred             cEEEEccCCCc---------c---------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREA---------D---------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~---------~---------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+++...         +               +...++++    ++...++|++||......           ...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----------~~~  156 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV-----------IPN  156 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----------CCc
Confidence            99999987521         0               01112222    223358999998654210           001


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..++++..+.||.+-.+.... .-............+         ..-+...+|+|
T Consensus       157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva  227 (260)
T PRK06603        157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAP---------LKRNTTQEDVG  227 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCC---------cCCCCCHHHHH
Confidence            1235 88998887653       468999999999886552100 000111111111111         11246789999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++..++....  ..|..+.+.++.
T Consensus       228 ~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        228 GAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHHhCcccccCcceEEEeCCcc
Confidence            99999987532  356777776653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.96  E-value=4.2e-08  Score=81.03  Aligned_cols=192  Identities=12%  Similarity=0.088  Sum_probs=115.7

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+  +-||+.+++.|+++|++|++.+|+... .+.+.    ....+.... ..+.+|++|.+++.++++.     -.+
T Consensus        11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~----~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415         11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVE----PIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHH----HHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6886  799999999999999999999887421 11110    000111122 5789999999887777653     268


Q ss_pred             cEEEEccCCCcc------------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        +    ++.++..++...++|++||.+...            ..|
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~------------~~~  152 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK------------YVP  152 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc------------CCC
Confidence            999999986310                        0    122233333336899999864311            111


Q ss_pred             -Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          126 -KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 -~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                       ...| .+|...+.+.+       ..++++..+.||.+..+...... ...........  .+       ..-+...+|+
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------l~r~~~pedv  223 (274)
T PRK08415        153 HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEIN--AP-------LKKNVSIEEV  223 (274)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhh--Cc-------hhccCCHHHH
Confidence             1235 88998877653       36899999999988664210000 00000000000  00       1124678999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      |+++..++...  ...|+.+.+.++.
T Consensus       224 a~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        224 GNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHHHHhhhhhhcccccEEEEcCcc
Confidence            99999988753  2367777777664

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.95  E-value=4.2e-08  Score=80.42  Aligned_cols=193  Identities=13%  Similarity=0.123  Sum_probs=114.7

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||  ++-||.++++.|+++|++|++..|.... .+.+.     .+.........+.+|++|++++.++++.     -.+
T Consensus        12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997         12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRIT-----EFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHH-----HHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            685  6799999999999999999988764221 11110     1111012234678999999888877753     269


Q ss_pred             cEEEEccCCCcc-----------c------------------hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD-----------E------------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-----------~------------------~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |++||++|....           .                  ++.++..+++..++|++||....-.           ..
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~-----------~~  154 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV-----------VP  154 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC-----------CC
Confidence            999999986310           0                  1112222333467999998654210           01


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ....| .+|...+.+.+       .++++++.+.||.+-.+...... .......+....+         ..-+..++|+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedv  225 (260)
T PRK06997        155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAP---------LRRNVTIEEV  225 (260)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCc---------ccccCCHHHH
Confidence            11235 88998877653       35899999999988654211000 0011111111111         1125678999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ++++..++...  ...|.++.+.++.
T Consensus       226 a~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        226 GNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHHHhCccccCcceeEEEEcCCh
Confidence            99999998753  2367777776653

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.94  E-value=6.1e-09  Score=87.85  Aligned_cols=169  Identities=16%  Similarity=0.167  Sum_probs=106.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCC--hHH---HHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKD--YDF---VKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~--~~~---~~~~~~~~~~   73 (287)
                      |||||.||+++++.|+++|++|++++|++++..+..     .++...  ..++..+.+|+.+  .+.   +.+.+...++
T Consensus        59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di  133 (320)
T PLN02780         59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVS-----DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV  133 (320)
T ss_pred             eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence            799999999999999999999999999876532211     111111  1356777889974  233   3334443356


Q ss_pred             cEEEEccCCCcc----------------------chHHH----HHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD----------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~----------------------~~~~l----~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                      +...+    +..+.  +..++|++||...+...          ..|
T Consensus       134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------~~p  203 (320)
T PLN02780        134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------SDP  203 (320)
T ss_pred             cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------CCc
Confidence            799999986311                      12222    22222  56789999997653210          112


Q ss_pred             -Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 -KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 -~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       ...| .+|...+.+.+       ..|++++.+.||.+-.+...             ...        ........+++|
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~-------------~~~--------~~~~~~~p~~~A  262 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS-------------IRR--------SSFLVPSSDGYA  262 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc-------------ccC--------CCCCCCCHHHHH
Confidence             2346 89998887652       35899999999988655210             000        001135789999


Q ss_pred             HHHHHHhcC
Q 023078          197 RAFVQVLGN  205 (287)
Q Consensus       197 ~~~~~~~~~  205 (287)
                      +.++..+..
T Consensus       263 ~~~~~~~~~  271 (320)
T PLN02780        263 RAALRWVGY  271 (320)
T ss_pred             HHHHHHhCC
Confidence            999998864

>PLN00015 protochlorophyllide reductase

Probab=98.93  E-value=6.5e-09  Score=87.39  Aligned_cols=192  Identities=15%  Similarity=0.115  Sum_probs=110.5

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||++.||.++++.|+++| ++|++.+|+.........     ++.....++.++.+|+.+.+++.++++.     ..+|
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAK-----SAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----HhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            7999999999999999999 999999997654221110     1111123577889999999887776652     2589


Q ss_pred             EEEEccCCCcc---------------------c----hHHHHHhCC--C--CCcEEEEeeeeEeecCC---CCC---CC-
Q 023078           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSD---LLP---HC-  118 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~----~~~l~~a~~--~--~~~~i~~Ss~~~y~~~~---~~~---~~-  118 (287)
                      ++||+||....                     +    ++.++..++  +  ..++|++||...+-...   ..+   .. 
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            99999986310                     0    222344443  2  46999999976531100   000   00 


Q ss_pred             ----------C-------CCCCCCCccc-cchHHHHHHH----Hh----cCCcEEEEccCceecCCCCCchhHHHHHHHH
Q 023078          119 ----------E-------TDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK  172 (287)
Q Consensus       119 ----------e-------~~~~~p~~~~-~~k~~~E~~~----~~----~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~  172 (287)
                                .       .....+...| .+|.+.+.+.    ++    .++.++.+.||.+............ .....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-~~~~~  236 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL-FRLLF  236 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH-HHHHH
Confidence                      0       0011122336 8998744432    22    4799999999998543211110010 01000


Q ss_pred             c-CCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          173 A-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       173 ~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      . -....       ...+..+++.|+.++.++..
T Consensus       237 ~~~~~~~-------~~~~~~pe~~a~~~~~l~~~  263 (308)
T PLN00015        237 PPFQKYI-------TKGYVSEEEAGKRLAQVVSD  263 (308)
T ss_pred             HHHHHHH-------hcccccHHHhhhhhhhhccc
Confidence            0 00000       01245789999998887765

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.82  E-value=4.3e-08  Score=78.62  Aligned_cols=138  Identities=7%  Similarity=0.080  Sum_probs=92.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----C-Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~-~~d   74 (287)
                      |||++-||+.+++.|+++|++|+++.|+.++..+...     ...+....+..+.+|+.+.+++.++++.     - .+|
T Consensus        11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-----~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862         11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYE-----QCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999999999998765322111     1111134567788999999888777642     1 689


Q ss_pred             EEEEccCCCc----------cc-----------hH----HHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           75 VVYDINGREA----------DE-----------VE----PILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        75 ~vi~~a~~~~----------~~-----------~~----~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      ++||++|...          +.           ..    .++..++  + ...+|++||...+              .+.
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------~~~  151 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------QDL  151 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------CCc
Confidence            9999997311          00           11    1122222  2 3588999985321              012


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecC
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~  157 (287)
                      ..| .+|...+.+.+       ..++++..+.||.+-.+
T Consensus       152 ~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        152 TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            235 88888777652       46899999999987666

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.78  E-value=7.5e-08  Score=80.75  Aligned_cols=190  Identities=13%  Similarity=0.066  Sum_probs=108.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccC--CCC---CchhhhhhcCCcEEEEecCCChHHHHhhhcc-----
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----   70 (287)
                      |||++.||.++++.|+++|++|++++|+........  ...   ....+.....++.++.+|+++++++.++++.     
T Consensus        14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   93 (305)
T PRK08303         14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ   93 (305)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999753211000  000   0011112223567889999999888777653     


Q ss_pred             CCccEEEEcc-CCCc-----c-------------------c----hHHHHHhCC--CCCcEEEEeeeeE-eecCCCCCCC
Q 023078           71 KGFDVVYDIN-GREA-----D-------------------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHC  118 (287)
Q Consensus        71 ~~~d~vi~~a-~~~~-----~-------------------~----~~~l~~a~~--~~~~~i~~Ss~~~-y~~~~~~~~~  118 (287)
                      -.+|++||++ +...     .                   +    ++.++..+.  +..++|++||... +...      
T Consensus        94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~------  167 (305)
T PRK08303         94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT------  167 (305)
T ss_pred             CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc------
Confidence            2689999998 6310     0                   0    111223332  3468999998543 1110      


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc-ccCCCCCceeee
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQL  189 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  189 (287)
                         .......| .+|.....+.+       ..++++..+.||.+-.+.     ......  ...... ..........-+
T Consensus       168 ---~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~-----~~~~~~--~~~~~~~~~~~~~p~~~~~  237 (305)
T PRK08303        168 ---HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM-----MLDAFG--VTEENWRDALAKEPHFAIS  237 (305)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH-----HHHhhc--cCccchhhhhccccccccC
Confidence               00112236 88988777653       357999999999874441     100000  000000 000000000113


Q ss_pred             eeHHHHHHHHHHHhcCC
Q 023078          190 GHVKDLARAFVQVLGNE  206 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~  206 (287)
                      ...+|+|++++.++..+
T Consensus       238 ~~peevA~~v~fL~s~~  254 (305)
T PRK08303        238 ETPRYVGRAVAALAADP  254 (305)
T ss_pred             CCHHHHHHHHHHHHcCc
Confidence            46899999999988764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.73  E-value=2e-07  Score=75.24  Aligned_cols=172  Identities=15%  Similarity=0.197  Sum_probs=114.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-+|+.++.+++++|.++.+.+.+.....+...     ..... ..+..+.+|+++.+++.+..++     -.+|+
T Consensus        44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~-----~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVK-----EIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHH-----HHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            8999999999999999999999999998776433221     11110 1578899999998877776653     27999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||.||....                    +    +++++-.+.  +..++|-++|..-+-+.          .. ...|
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~----------~g-l~~Y  186 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP----------AG-LADY  186 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC----------cc-chhh
Confidence            9999997321                    1    333444433  67799999987643211          11 2235


Q ss_pred             -cchHHHHHHHH----------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~----------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                       .||.++.-+.+          ..+++.+.+.|+.+=..     +    +    .+ .    ..-....+.+..+.+|+.
T Consensus       187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg-----m----f----~~-~----~~~~~l~P~L~p~~va~~  248 (300)
T KOG1201|consen  187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG-----M----F----DG-A----TPFPTLAPLLEPEYVAKR  248 (300)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-----c----c----CC-C----CCCccccCCCCHHHHHHH
Confidence             88888765432          24688899998765211     1    1    11 1    112345688899999999


Q ss_pred             HHHHhcCCc
Q 023078          199 FVQVLGNEK  207 (287)
Q Consensus       199 ~~~~~~~~~  207 (287)
                      ++..+..+.
T Consensus       249 Iv~ai~~n~  257 (300)
T KOG1201|consen  249 IVEAILTNQ  257 (300)
T ss_pred             HHHHHHcCC
Confidence            999987654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.66  E-value=1.4e-07  Score=71.95  Aligned_cols=136  Identities=17%  Similarity=0.084  Sum_probs=95.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      .+++|.||.+|++.+.++|+.|++..|+-+.-. .+.         ...++...+.|+++++++.+...+      -+.|
T Consensus        14 gcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~-~L~---------~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen   14 GCSSGGIGYALAKEFARNGYLVYATARRLEPMA-QLA---------IQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             ecCCcchhHHHHHHHHhCCeEEEEEccccchHh-hHH---------HhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            367899999999999999999999999877632 222         136788999999999887776543      2589


Q ss_pred             EEEEccCCC--------------------ccchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +.|+.||..                    .-+..++.+++.     ....+|+++|...|-+...           .+.|
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf-----------~~iY  152 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF-----------GSIY  152 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch-----------hhhh
Confidence            999998862                    112223333321     3457899999887532111           2246


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecC
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~  157 (287)
                       .+|.+.-.+.+       -.|++++.+-+|.|--.
T Consensus       153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             hHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence             88888777642       35889999999877554

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.66  E-value=5.8e-07  Score=73.65  Aligned_cols=198  Identities=17%  Similarity=0.169  Sum_probs=121.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh---hcCCcEEEEecCCChHHHHhhhc----c--C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLS----A--K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~----~--~   71 (287)
                      |||+.-||++++..|.+.|.+|++.+|+.+.......     ++..   ...++..+.+|+++.++..++++    +  -
T Consensus        14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G   88 (270)
T KOG0725|consen   14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQ-----ELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG   88 (270)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998775221111     0000   02458889999998765444433    2  2


Q ss_pred             CccEEEEccCCCccc----------------------hHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREADE----------------------VEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 ~~d~vi~~a~~~~~~----------------------~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      ++|++++.+|.....                      ...+..++.      +...++++||...+...         ..
T Consensus        89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~---------~~  159 (270)
T KOG0725|consen   89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG---------PG  159 (270)
T ss_pred             CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC---------CC
Confidence            699999999874321                      122222221      34568888877542111         11


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh----HHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      .+ ..| .+|...+.+.+       .+++++..+-||.+..+.....+.    ..+.+.......++       .--+..
T Consensus       160 ~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-------~gr~g~  231 (270)
T KOG0725|consen  160 SG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-------LGRVGT  231 (270)
T ss_pred             Cc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-------cCCccC
Confidence            11 356 99999988763       568999999999998875111111    11111100111111       113456


Q ss_pred             HHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .+|++.++..++....  ..|+.+.+.++..
T Consensus       232 ~~eva~~~~fla~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  232 PEEVAEAAAFLASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             HHHHHHhHHhhcCcccccccCCEEEEeCCEE
Confidence            8999999998887642  2566666666543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.65  E-value=4.2e-08  Score=74.72  Aligned_cols=123  Identities=20%  Similarity=0.203  Sum_probs=83.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecC--CccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~   72 (287)
                      |||+|-||..++++|+++| +.|+++.|+  .+...+.     ...+.....++.++++|+.+.+++.++++.     ..
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQEL-----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH-----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc-----ccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999995 678888888  2221111     112223346789999999999888777764     37


Q ss_pred             ccEEEEccCCCccc--------------------hHHHHHhC--CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc-cc
Q 023078           73 FDVVYDINGREADE--------------------VEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RH  129 (287)
Q Consensus        73 ~d~vi~~a~~~~~~--------------------~~~l~~a~--~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~-~~  129 (287)
                      +|++||++|....+                    ...+.+++  ++..++|++||....            ...|.. .|
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~~~~~Y  148 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV------------RGSPGMSAY  148 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT------------SSSTTBHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc------------cCCCCChhH
Confidence            99999999874321                    11222222  267789999997642            112222 36


Q ss_pred             -cchHHHHHHHH
Q 023078          130 -KGKLNTESVLE  140 (287)
Q Consensus       130 -~~k~~~E~~~~  140 (287)
                       .+|...+.+.+
T Consensus       149 ~askaal~~~~~  160 (167)
T PF00106_consen  149 SASKAALRGLTQ  160 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence             88888887764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.65  E-value=5.3e-08  Score=75.23  Aligned_cols=139  Identities=23%  Similarity=0.241  Sum_probs=86.4

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|-||..+++.|.+++ .+|+++.|+.....+..  .....+.....++.++.+|++|++++.+++...     .++
T Consensus         6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~   83 (181)
T PF08659_consen    6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID   83 (181)
T ss_dssp             ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred             ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence            6999999999999999997 58999999832111100  012233444568899999999999999988753     578


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhCC--CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCccc-c
Q 023078           75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~~--~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      .|||+++...                    .+..++.+++.  ....||.+||... +|...            ...| .
T Consensus        84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g------------q~~Yaa  151 (181)
T PF08659_consen   84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG------------QSAYAA  151 (181)
T ss_dssp             EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT------------BHHHHH
T ss_pred             eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc------------hHhHHH
Confidence            8999998732                    23566777765  7889999999874 33211            1123 3


Q ss_pred             chHHHHHHH---HhcCCcEEEEccCc
Q 023078          131 GKLNTESVL---ESKGVNWTSLRPVY  153 (287)
Q Consensus       131 ~k~~~E~~~---~~~~~~~~ilr~~~  153 (287)
                      .....+.+.   ++.+.+++.+.-+.
T Consensus       152 AN~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  152 ANAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEccc
Confidence            344444443   45688888877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.60  E-value=1e-06  Score=68.12  Aligned_cols=202  Identities=13%  Similarity=0.163  Sum_probs=118.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      ||+.|-||..+.++|+++|..+.++..+.+......      ++.+.  ...+.++++|+++..++.+++++.     .+
T Consensus        11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a------kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen   11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA------KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH------HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            699999999999999999988777776555421100      11111  346788999999988888777642     69


Q ss_pred             cEEEEccCCCc----------------cchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccch
Q 023078           74 DVVYDINGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGK  132 (287)
Q Consensus        74 d~vi~~a~~~~----------------~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k  132 (287)
                      |++||.||...                .++...+.++.     .-.-+|.+||..-..+..-.|+...+...-.++ ..-
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgF-TRS  163 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGF-TRS  163 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeee-ehh
Confidence            99999999742                24555666664     223578888854321111111111111100011 111


Q ss_pred             HHHHHHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHc-CCCcccCC---CCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          133 LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPG---SGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       133 ~~~E~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      .+-+.+.++.|+.+..++||..--         .++..+.+ +.....-.   +.-...+--+..+++..++.+++.+. 
T Consensus       164 la~~ayy~~sGV~~~avCPG~t~t---------~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~-  233 (261)
T KOG4169|consen  164 LADLAYYQRSGVRFNAVCPGFTRT---------DLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK-  233 (261)
T ss_pred             hhhhhhHhhcCEEEEEECCCcchH---------HHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc-
Confidence            223455678899999999986422         12233322 21111000   00001223456789999999999855 


Q ss_pred             CCceEEeeCCC
Q 023078          209 SRQVFNISGEK  219 (287)
Q Consensus       209 ~~~~~~~~~~~  219 (287)
                      +|.+|.+..+.
T Consensus       234 NGaiw~v~~g~  244 (261)
T KOG4169|consen  234 NGAIWKVDSGS  244 (261)
T ss_pred             CCcEEEEecCc
Confidence            67888888764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.59  E-value=2.5e-07  Score=77.10  Aligned_cols=152  Identities=21%  Similarity=0.126  Sum_probs=98.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh--hhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF--AEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      ||||+.||..+++.|+++|.+|+..+|+.....+...     .+  ......+.++++|+.+.++++++.+.     ...
T Consensus        41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~-----~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l  115 (314)
T KOG1208|consen   41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKE-----QIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL  115 (314)
T ss_pred             ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence            7999999999999999999999999999754221111     11  11135677899999998877776543     378


Q ss_pred             cEEEEccCCCc-------c-----------c----hHHHHHhCC--CCCcEEEEeeeeEeec--CCCCCCCCCCC-CCCC
Q 023078           74 DVVYDINGREA-------D-----------E----VEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDT-VDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~-------~-----------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~--~~~~~~~e~~~-~~p~  126 (287)
                      |+.|+.||+..       +           +    +..+++.++  ...|+|++||..- +.  .......+... ....
T Consensus       116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~  194 (314)
T KOG1208|consen  116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSD  194 (314)
T ss_pred             cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccch
Confidence            99999999732       1           1    344555555  2279999999764 11  11111111111 1111


Q ss_pred             ccc-cchHHHHHHH----Hh--cCCcEEEEccCceecCC
Q 023078          127 SRH-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPL  158 (287)
Q Consensus       127 ~~~-~~k~~~E~~~----~~--~~~~~~ilr~~~v~g~~  158 (287)
                      ..| .||.+...+.    ++  .|+.+..+-||.+..+.
T Consensus       195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            125 7777654332    22  27999999999998874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.55  E-value=3.9e-06  Score=70.04  Aligned_cols=197  Identities=8%  Similarity=-0.044  Sum_probs=109.2

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCCccccccC---CCCCchhhhhh-----cCCcEEEEecC--CCh-------
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL---PGESDQEFAEF-----SSKILHLKGDR--KDY-------   61 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~d~--~~~-------   61 (287)
                      |||  +.-||..+++.|.++|.+|++ .|.........   ...........     ......+.+|+  .+.       
T Consensus        15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   93 (303)
T PLN02730         15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV   93 (303)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence            799  799999999999999999988 65433211100   00000000000     01135677787  322       


Q ss_pred             -----------HHHHhhhcc-----CCccEEEEccCCCc---c-------------------c----hHHHHHhCCCCCc
Q 023078           62 -----------DFVKSSLSA-----KGFDVVYDINGREA---D-------------------E----VEPILDALPNLEQ   99 (287)
Q Consensus        62 -----------~~~~~~~~~-----~~~d~vi~~a~~~~---~-------------------~----~~~l~~a~~~~~~   99 (287)
                                 +++.++++.     -.+|++||++|...   .                   +    ++.++..++...+
T Consensus        94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~  173 (303)
T PLN02730         94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA  173 (303)
T ss_pred             hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence                       244544442     15899999996421   0                   1    1222333332368


Q ss_pred             EEEEeeeeEeecCCCCCCCCCCCCCC-C-ccc-cchHHHHHHHH-------h-cCCcEEEEccCceecCCCCCc-hhHHH
Q 023078          100 FIYCSSAGVYLKSDLLPHCETDTVDP-K-SRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNP-VEEWF  167 (287)
Q Consensus       100 ~i~~Ss~~~y~~~~~~~~~e~~~~~p-~-~~~-~~k~~~E~~~~-------~-~~~~~~ilr~~~v~g~~~~~~-~~~~~  167 (287)
                      +|++||.....            ..| . ..| .+|...+.+.+       . .++++..+.||.+-.+..... .....
T Consensus       174 II~isS~a~~~------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~  241 (303)
T PLN02730        174 SISLTYIASER------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDM  241 (303)
T ss_pred             EEEEechhhcC------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHH
Confidence            99999875421            112 1 235 89998887652       2 479999999998866532110 00111


Q ss_pred             HHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ........++         .-+...+|++.+++.++....  ..|+.+.+.++.
T Consensus       242 ~~~~~~~~pl---------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        242 IEYSYANAPL---------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             HHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            1111111110         123578999999999987432  356777776653

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.48  E-value=1.5e-06  Score=67.25  Aligned_cols=182  Identities=15%  Similarity=0.162  Sum_probs=111.1

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEE-EecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-------C
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~   71 (287)
                      |||+.-||-.|+++|++. |.++++ ..|+++++..++     ..+...++++++++.|+++.+++.++.++       .
T Consensus         9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l-----~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATEL-----ALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHH-----HHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            799999999999999986 655554 555565532222     22333468999999999988777666543       4


Q ss_pred             CccEEEEccCCCc---------------------cc----hHH---HHHhCC----------CCCcEEEEeeeeEeecCC
Q 023078           72 GFDVVYDINGREA---------------------DE----VEP---ILDALP----------NLEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        72 ~~d~vi~~a~~~~---------------------~~----~~~---l~~a~~----------~~~~~i~~Ss~~~y~~~~  113 (287)
                      +.|++|++||...                     .+    ++.   |++.+.          ....+|++||.+.-    
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s----  159 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS----  159 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc----
Confidence            8899999998721                     11    111   222211          12368888887642    


Q ss_pred             CCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCc
Q 023078          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                          .......+...| .||.+.-.+.+       ..++-++.+.||+|--.-                      +.   
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM----------------------gg---  210 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM----------------------GG---  210 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC----------------------CC---
Confidence                111223334446 88888766543       457788999999884441                      10   


Q ss_pred             eeeeeeHHHHHHHHHHHhcC--CcCCCceEEeeCCCcc
Q 023078          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYV  221 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (287)
                      ....+.+++-+.-++..+.+  +...|..||- ++.++
T Consensus       211 ~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~-dlt~i  247 (249)
T KOG1611|consen  211 KKAALTVEESTSKLLASINKLKNEHNGGFFNR-DGTPI  247 (249)
T ss_pred             CCcccchhhhHHHHHHHHHhcCcccCcceEcc-CCCcC
Confidence            12345677777777777754  3335555553 34433

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.46  E-value=3.5e-06  Score=68.44  Aligned_cols=180  Identities=19%  Similarity=0.156  Sum_probs=114.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      ||++.-+|..++..+..+|.+|.++.|+.++..+....   ..+......+.+..+|+.|.++....+++.     -+|.
T Consensus        39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~---l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~  115 (331)
T KOG1210|consen   39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAE---LELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN  115 (331)
T ss_pred             ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhh---hhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence            79999999999999999999999999998874322221   111222233678899999998888888765     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC---CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~---~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|+|||..+.                    ++.++..+    ++   ...+++.+||... ++            ....+
T Consensus       116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~------------i~Gys  183 (331)
T KOG1210|consen  116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG------------IYGYS  183 (331)
T ss_pred             EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC------------ccccc
Confidence            9999997432                    23444333    33   2338888888653 11            11122


Q ss_pred             cc-cchHHH----HHHH---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc-ccCCCCCceeeeeeHHHHHHH
Q 023078          128 RH-KGKLNT----ESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~----E~~~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .| .+|.+.    +.+-   ..+++.++..-|+.+-.|+..         +-...+|. ...  -+...+.+..+++|.+
T Consensus       184 aYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE---------~En~tkP~~t~i--i~g~ss~~~~e~~a~~  252 (331)
T KOG1210|consen  184 AYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE---------RENKTKPEETKI--IEGGSSVIKCEEMAKA  252 (331)
T ss_pred             ccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc---------cccccCchheee--ecCCCCCcCHHHHHHH
Confidence            23 455543    3332   246899999999988777521         11111221 111  1122355889999999


Q ss_pred             HHHHhcCC
Q 023078          199 FVQVLGNE  206 (287)
Q Consensus       199 ~~~~~~~~  206 (287)
                      ++.-+.+.
T Consensus       253 ~~~~~~rg  260 (331)
T KOG1210|consen  253 IVKGMKRG  260 (331)
T ss_pred             HHhHHhhc
Confidence            99887764

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.42  E-value=5.4e-07  Score=68.99  Aligned_cols=98  Identities=17%  Similarity=0.236  Sum_probs=68.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||||++|. +++.|.++|++|++++|++........     .+.. ...+.++.+|+.|.+++.++++..     .+|.
T Consensus         6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----ESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            699998876 999999999999999998654221110     0111 246788899999998888777631     4667


Q ss_pred             EEEccCCCccchHHHHHhCC--CCC----cEEEEeeee
Q 023078           76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAG  107 (287)
Q Consensus        76 vi~~a~~~~~~~~~l~~a~~--~~~----~~i~~Ss~~  107 (287)
                      +|+..  ......++.++|+  +++    +|+|+=+..
T Consensus        79 lv~~v--h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         79 AVAWI--HSSAKDALSVVCRELDGSSETYRLFHVLGSA  114 (177)
T ss_pred             EEEec--cccchhhHHHHHHHHccCCCCceEEEEeCCc
Confidence            76533  3446778888887  777    898876543

>PRK09620 hypothetical protein; Provisional

Probab=98.38  E-value=8.2e-07  Score=70.78  Aligned_cols=72  Identities=17%  Similarity=0.164  Sum_probs=49.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      +|||+|++|++.|+++|++|+++++.........+.         ...+..+.++....+.+.++++..++|+|||+|++
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            579999999999999999999998753321111110         12233455533334677777865589999999997


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus        98 s   98 (229)
T PRK09620         98 S   98 (229)
T ss_pred             c
Confidence            3

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.37  E-value=3.9e-06  Score=62.17  Aligned_cols=189  Identities=15%  Similarity=0.202  Sum_probs=116.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-CCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~d~vi~~   79 (287)
                      ||+.-.||+.++..|.+.|.+|+++.|++........+        ....++++.+|+.+.+.+.+.+-. .-.|..++.
T Consensus        13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--------~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen   13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--------TPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--------CCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            68888999999999999999999999998875444432        133489999999998888887753 247888888


Q ss_pred             cCCCcc--------------------c--------hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           80 NGREAD--------------------E--------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        80 a~~~~~--------------------~--------~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      ||....                    +        .+++++.. ....++.+||.+.-           .+..-...| .
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~-~~GaIVNvSSqas~-----------R~~~nHtvYca  152 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ-IKGAIVNVSSQASI-----------RPLDNHTVYCA  152 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc-CCceEEEecchhcc-----------cccCCceEEee
Confidence            886221                    1        11122221 12248888887641           112233456 6


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      +|.+...+-+       ..++++..+.|..++-.-....+ -+.--+.+....+         .--|.-++.+++++..+
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riP---------l~rFaEV~eVVnA~lfL  223 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIP---------LKRFAEVDEVVNAVLFL  223 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCc---------hhhhhHHHHHHhhheee
Confidence            7776665432       24678888999888765322211 1111111111111         12356688899998888


Q ss_pred             hcCCc--CCCceEEeeCC
Q 023078          203 LGNEK--ASRQVFNISGE  218 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~  218 (287)
                      +....  ..|....+-+|
T Consensus       224 LSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  224 LSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eecCcCcccCceeeecCC
Confidence            76543  24555555544

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.34  E-value=4e-06  Score=63.87  Aligned_cols=137  Identities=19%  Similarity=0.224  Sum_probs=91.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc---c--CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---A--KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~--~~~d~   75 (287)
                      |||+..||..|++.+++.|-+|++..|+.....+....         .+.+....+|+.|.++..+..+   +  ...++
T Consensus        11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967          11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            79999999999999999999999999998874433321         4677778899988765444432   1  26899


Q ss_pred             EEEccCCCcc----c----------------------hHHHHHhC-C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD----E----------------------VEPILDAL-P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----~----------------------~~~l~~a~-~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|++||....    +                      +..++.-+ + ...-+|.+||.-.+-+..           ...
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~-----------~~P  150 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA-----------STP  150 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc-----------ccc
Confidence            9999997311    1                      11122222 2 355788999876542222           122


Q ss_pred             cc-cchHHHHHH-------HHhcCCcEEEEccCceecC
Q 023078          128 RH-KGKLNTESV-------LESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       128 ~~-~~k~~~E~~-------~~~~~~~~~ilr~~~v~g~  157 (287)
                      .| .+|.+.-.+       ++..+++++-+-|+.|-.+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            35 666665433       2345788998999887553

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.30  E-value=8.9e-06  Score=66.23  Aligned_cols=136  Identities=19%  Similarity=0.156  Sum_probs=95.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc-------cCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-------AKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~~   73 (287)
                      ||+-.-.|+.|+++|.++|+.|.+-+-.++... .+....      ..++...++.|++++++++++.+       +.+.
T Consensus        35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae-~L~~~~------~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE-SLRGET------KSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH-HHhhhh------cCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            688888999999999999999999997666532 232111      04678888999999988887764       3466


Q ss_pred             cEEEEccCCCc---------------------cc----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREA---------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~---------------------~~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      =.+||+||...                     -+    ++.++-.++ .-.|+|++||..-     +      .+..-.+
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G-----R------~~~p~~g  176 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG-----R------VALPALG  176 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc-----C------ccCcccc
Confidence            78999998521                     12    333444444 4569999999753     1      1111234


Q ss_pred             cc-cchHHHHHHH-------HhcCCcEEEEccCce
Q 023078          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYI  154 (287)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v  154 (287)
                      .| .||.+.|.+.       +..|+++.++-||.+
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            56 9999999874       357999999999943

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.18  E-value=1.5e-05  Score=64.89  Aligned_cols=140  Identities=19%  Similarity=0.219  Sum_probs=88.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc-cccCCCCCchhhhhhc-CCcEEEEecCCC-hHHHHhhhcc-----CC
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~d~~~-~~~~~~~~~~-----~~   72 (287)
                      |||++.||..+++.|+++|+.|+++.|+.... .+.+..    ...... ..+.+..+|+++ .+++..+++.     -.
T Consensus        11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028          11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAA----AIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHH----HHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999888876541 111100    000001 256777899998 7666655542     14


Q ss_pred             ccEEEEccCCCcc---------------------chHHHHHhCC-CCC--cEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           73 FDVVYDINGREAD---------------------EVEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        73 ~d~vi~~a~~~~~---------------------~~~~l~~a~~-~~~--~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +|++||++|....                     +...+.+++. ..+  ++|.+||.... .....          ...
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~----------~~~  155 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG----------QAA  155 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC----------cch
Confidence            8999999997421                     1111122111 112  89999987653 21110          234


Q ss_pred             c-cchHHHHHHH-------HhcCCcEEEEccCcee
Q 023078          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIY  155 (287)
Q Consensus       129 ~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~  155 (287)
                      | .+|.+.+.+.       ...|+.+..+.||.+-
T Consensus       156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            5 8999887654       2367999999999544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.17  E-value=5.8e-06  Score=85.67  Aligned_cols=145  Identities=17%  Similarity=0.039  Sum_probs=95.0

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCcc-----ccccC-------------------------CC-------CC--
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-----IAQQL-------------------------PG-------ES--   40 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~-----~~~~~-------------------------~~-------~~--   40 (287)
                      |||+|.||..+++.|.++ |.+|++++|+...     +....                         ..       ..  
T Consensus      2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813      2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred             eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence            799999999999999998 6999999998310     00000                         00       00  


Q ss_pred             ---chhhhhhcCCcEEEEecCCChHHHHhhhccC----CccEEEEccCCCc--------------------cchHHHHHh
Q 023078           41 ---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGREA--------------------DEVEPILDA   93 (287)
Q Consensus        41 ---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~vi~~a~~~~--------------------~~~~~l~~a   93 (287)
                         ...+......+.++.+|++|.+++.+++...    .+|.|||+||...                    .+..+++++
T Consensus      2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence               0111223456788999999998887777632    5899999999732                    245566766


Q ss_pred             CC--CCCcEEEEeeeeEe-ecCCCCCCCCCCCCCCCccc-cchHHHHHHHH----h-cCCcEEEEccCceecC
Q 023078           94 LP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLE----S-KGVNWTSLRPVYIYGP  157 (287)
Q Consensus        94 ~~--~~~~~i~~Ss~~~y-~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~----~-~~~~~~ilr~~~v~g~  157 (287)
                      +.  ..+++|++||...+ |..            ....| .+|.....+.+    + .+++++.+.+|.+-++
T Consensus      2163 l~~~~~~~IV~~SSvag~~G~~------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2163 LNAENIKLLALFSSAAGFYGNT------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHhCCCeEEEEechhhcCCCC------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            64  45789999997642 221            11235 77766555432    2 2578888999876554

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06720 hypothetical protein; Provisional

Probab=98.15  E-value=4.4e-06  Score=63.60  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=56.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||..++..|.++|++|++++|+.......     ..++........++.+|+++.+++.++++.     -++|.
T Consensus        22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQAT-----VEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999876542110     011111124566789999998877775432     26899


Q ss_pred             EEEccCCC
Q 023078           76 VYDINGRE   83 (287)
Q Consensus        76 vi~~a~~~   83 (287)
                      +||++|..
T Consensus        97 lVnnAG~~  104 (169)
T PRK06720         97 LFQNAGLY  104 (169)
T ss_pred             EEECCCcC
Confidence            99999853

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.14  E-value=6.2e-06  Score=67.05  Aligned_cols=140  Identities=21%  Similarity=0.199  Sum_probs=90.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChH----HHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYD----FVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~----~~~~~~~~~~~d~   75 (287)
                      ||||..||++.+++|+++|.+|++++|+.++....-     .+..+ ....+.++..|+++.+    .+.+.+....+-+
T Consensus        55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~-----kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVA-----KEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            799999999999999999999999999998843222     12222 2345788889998655    4666677667888


Q ss_pred             EEEccCCCccch--------------------------HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-
Q 023078           76 VYDINGREADEV--------------------------EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (287)
Q Consensus        76 vi~~a~~~~~~~--------------------------~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-  126 (287)
                      +||++|...+..                          +-++--+.  +..-++.+||.+-.            .+.|. 
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~------------~p~p~~  197 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL------------IPTPLL  197 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc------------ccChhH
Confidence            999998743211                          11111111  34457788876531            12222 


Q ss_pred             ccc-cchHHHHHHH-------HhcCCcEEEEccCceecC
Q 023078          127 SRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       127 ~~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~  157 (287)
                      +.| .+|...+.+-       +..|+.+-.+-|..|-++
T Consensus       198 s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  198 SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence            235 7777554432       345788877888777665

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.13  E-value=7.7e-06  Score=65.42  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=48.6

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEEEc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi~~   79 (287)
                      .+||++|++|++.|+++|++|++++|......  ..          ..+++++.++..+  .+.+.+.+.  ++|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC--CC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence            47999999999999999999999997643211  00          1356666654332  245556665  79999999


Q ss_pred             cCCC
Q 023078           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ||..
T Consensus        89 AAvs   92 (229)
T PRK06732         89 MAVS   92 (229)
T ss_pred             CccC
Confidence            9974

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.11  E-value=0.00043  Score=57.83  Aligned_cols=198  Identities=8%  Similarity=-0.016  Sum_probs=101.9

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCc-------cccccC------CCCCc---hhh---hhhcCCcEEEEecCC
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQL------PGESD---QEF---AEFSSKILHLKGDRK   59 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~-------~~~~~~------~~~~~---~~~---~~~~~~~~~~~~d~~   59 (287)
                      |||+  .-||+++++.|.++|++|++.++.+.       ......      .....   .+.   .......+-+..|++
T Consensus        14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~   93 (299)
T PRK06300         14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR   93 (299)
T ss_pred             eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence            7885  89999999999999999999765420       000000      00000   000   000001111222222


Q ss_pred             C--------hHHHHhhhc----cC-CccEEEEccCCCc---c-------------------c----hHHHHHhCCCCCcE
Q 023078           60 D--------YDFVKSSLS----AK-GFDVVYDINGREA---D-------------------E----VEPILDALPNLEQF  100 (287)
Q Consensus        60 ~--------~~~~~~~~~----~~-~~d~vi~~a~~~~---~-------------------~----~~~l~~a~~~~~~~  100 (287)
                      +        .+++.++++    .. ++|++||++|...   .                   +    ++.++..++...++
T Consensus        94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~i  173 (299)
T PRK06300         94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGST  173 (299)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeE
Confidence            1        112333332    22 6999999987531   0                   1    12223333333578


Q ss_pred             EEEeeeeEeecCCCCCCCCCCCCCCC--ccc-cchHHHHHHHH-------h-cCCcEEEEccCceecCCCCC-chhHHHH
Q 023078          101 IYCSSAGVYLKSDLLPHCETDTVDPK--SRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFF  168 (287)
Q Consensus       101 i~~Ss~~~y~~~~~~~~~e~~~~~p~--~~~-~~k~~~E~~~~-------~-~~~~~~ilr~~~v~g~~~~~-~~~~~~~  168 (287)
                      |.+||....-            ..|.  ..| .+|...+.+.+       . +|+++..+.||.+-.+.... .......
T Consensus       174 i~iss~~~~~------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~  241 (299)
T PRK06300        174 ISLTYLASMR------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMV  241 (299)
T ss_pred             EEEeehhhcC------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHH
Confidence            8888754321            1111  135 88998876642       2 48999999999876653110 0001111


Q ss_pred             HHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      .......+.         ..+...+|++.++..++...  ...|+.+.+.++.
T Consensus       242 ~~~~~~~p~---------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        242 DYYQDWAPL---------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             HHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            111111111         12456899999999888653  2357777776653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.07  E-value=5.9e-05  Score=55.89  Aligned_cols=189  Identities=19%  Similarity=0.213  Sum_probs=113.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||..-+|+..++.|.++|..|.+++...++-.+.-        .+...++.+.+.|+++++++..++...     ..|+
T Consensus        15 tggasglg~ataerlakqgasv~lldlp~skg~~va--------kelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   15 TGGASGLGKATAERLAKQGASVALLDLPQSKGADVA--------KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             ecCcccccHHHHHHHHhcCceEEEEeCCcccchHHH--------HHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            688899999999999999999999998776632211        122467899999999999888887642     5899


Q ss_pred             EEEccCCCc--------------------------cchHHHHHhC-------C---CCCcEEEEe--eeeEeecCCCCCC
Q 023078           76 VYDINGREA--------------------------DEVEPILDAL-------P---NLEQFIYCS--SAGVYLKSDLLPH  117 (287)
Q Consensus        76 vi~~a~~~~--------------------------~~~~~l~~a~-------~---~~~~~i~~S--s~~~y~~~~~~~~  117 (287)
                      .++|+|...                          .++.|+++.-       +   +-+|=|.+.  |..+|.++..+  
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq--  164 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ--  164 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch--
Confidence            999998721                          1222222210       0   123333333  33333322211  


Q ss_pred             CCCCCCCCCccc-cchHHHH-------HHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          118 CETDTVDPKSRH-KGKLNTE-------SVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       118 ~e~~~~~p~~~~-~~k~~~E-------~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                               ..| .||...-       +-+.-.|++++.+-||.+--|-  -..++.-++..... .++++.      -+
T Consensus       165 ---------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpl--lsslpekv~~fla~-~ipfps------rl  226 (260)
T KOG1199|consen  165 ---------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPL--LSSLPEKVKSFLAQ-LIPFPS------RL  226 (260)
T ss_pred             ---------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChh--hhhhhHHHHHHHHH-hCCCch------hc
Confidence                     123 4454322       2233458999999998764442  11122233333332 222221      23


Q ss_pred             eeHHHHHHHHHHHhcCCcCCCceEEeeC
Q 023078          190 GHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~~~~~~~~~~~  217 (287)
                      -|..+.+..+..+++++-.+|++..+.+
T Consensus       227 g~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  227 GHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             CChHHHHHHHHHHHhCcccCCeEEEecc
Confidence            4567788888889999877787777654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.04  E-value=2.8e-06  Score=69.95  Aligned_cols=91  Identities=18%  Similarity=0.222  Sum_probs=67.0

Q ss_pred             CCcccchHHHHHHHHHH----CCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      .|||||.|.++++.+.+    .+...-+..|++.+..+.+.......-.. .+...++.+|..|++++.+..+  ++.+|
T Consensus        11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~-ls~~~i~i~D~~n~~Sl~emak--~~~vi   87 (423)
T KOG2733|consen   11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTD-LSSSVILIADSANEASLDEMAK--QARVI   87 (423)
T ss_pred             EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCC-cccceEEEecCCCHHHHHHHHh--hhEEE
Confidence            49999999999999998    57889999999887544443111100011 1233388899999999999999  99999


Q ss_pred             EEccCCCccchHHHHHhC
Q 023078           77 YDINGREADEVEPILDAL   94 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~   94 (287)
                      +||+|+..-..+.++++|
T Consensus        88 vN~vGPyR~hGE~VVkac  105 (423)
T KOG2733|consen   88 VNCVGPYRFHGEPVVKAC  105 (423)
T ss_pred             EeccccceecCcHHHHHH
Confidence            999998665555555554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.04  E-value=1.1e-05  Score=68.77  Aligned_cols=81  Identities=26%  Similarity=0.304  Sum_probs=65.2

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|++|+.++..|++++ ++|++.+|+.++..+...        ....+++.+..|..|.+.+.++++  +.|+||+++.
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~--------~~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p   77 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAE--------LIGGKVEALQVDAADVDALVALIK--DFDLVINAAP   77 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--------hccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence            44999999999999998 999999999877433221        112479999999999999999999  7799999998


Q ss_pred             CCccchHHHHHhCC
Q 023078           82 READEVEPILDALP   95 (287)
Q Consensus        82 ~~~~~~~~l~~a~~   95 (287)
                      .....  +++++|-
T Consensus        78 ~~~~~--~i~ka~i   89 (389)
T COG1748          78 PFVDL--TILKACI   89 (389)
T ss_pred             chhhH--HHHHHHH
Confidence            76543  6676654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.89  E-value=1.9e-05  Score=68.61  Aligned_cols=83  Identities=24%  Similarity=0.320  Sum_probs=60.0

Q ss_pred             CCcccchHHHHHHHHHHCC-C-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      .|| |++|+.+++.|.+++ + +|++.+|+..+........       ...+++.+..|..|.+++.++++  +.|+|||
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin   73 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN   73 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence            488 999999999999986 4 8999999988743332100       14689999999999999999999  8899999


Q ss_pred             ccCCCccchHHHHHhCC
Q 023078           79 INGREADEVEPILDALP   95 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~   95 (287)
                      +++..  ....++++|.
T Consensus        74 ~~gp~--~~~~v~~~~i   88 (386)
T PF03435_consen   74 CAGPF--FGEPVARACI   88 (386)
T ss_dssp             -SSGG--GHHHHHHHHH
T ss_pred             CCccc--hhHHHHHHHH
Confidence            99875  3344555543

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.87  E-value=4.4e-05  Score=61.87  Aligned_cols=83  Identities=16%  Similarity=0.159  Sum_probs=63.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||||. |+.|++.|.++|++|++.++++... +.+.          ..+...+..+..+.+++.+.+++.++|+||+.+
T Consensus         6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~-~~~~----------~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK-HLYP----------IHQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             EechHH-HHHHHHHHHhCCCeEEEEEccCCcc-cccc----------ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            599999 9999999999999999999988652 2222          122334555666778899999988999999987


Q ss_pred             CCCc-cchHHHHHhCC
Q 023078           81 GREA-DEVEPILDALP   95 (287)
Q Consensus        81 ~~~~-~~~~~l~~a~~   95 (287)
                      -... .-..++.++|+
T Consensus        74 HPfA~~is~~a~~a~~   89 (256)
T TIGR00715        74 HPFAAQITTNATAVCK   89 (256)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            7644 45677788877

This enzyme was found to be a monomer by gel filtration.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.70  E-value=9.9e-05  Score=61.92  Aligned_cols=148  Identities=19%  Similarity=0.198  Sum_probs=86.6

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.||+.++..|..++  ++++++++.... ...+      ++.....  .....+.+|+.++.+.++  ++|+||+
T Consensus        14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~------Dl~~~~~--~~~v~~~td~~~~~~~l~--gaDvVVi   82 (321)
T PTZ00325         14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAA------DLSHIDT--PAKVTGYADGELWEKALR--GADLVLI   82 (321)
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-cccc------chhhcCc--CceEEEecCCCchHHHhC--CCCEEEE
Confidence            5888999999999998654  689999993211 1000      1111111  223345555555566777  9999999


Q ss_pred             ccCCCcc--------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCC--CCCCCCCCCCCccc-cchHHHHHH-
Q 023078           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESV-  138 (287)
Q Consensus        79 ~a~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~--~~~e~~~~~p~~~~-~~k~~~E~~-  138 (287)
                      ++|....              .+++++++++  +++++|+++|..+.....-.  .........|...| .+-...-++ 
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            9997432              3556677765  88999999997763321110  01122333344444 332322222 


Q ss_pred             --H-HhcCCcEEEEccCceecCCCC
Q 023078          139 --L-ESKGVNWTSLRPVYIYGPLNY  160 (287)
Q Consensus       139 --~-~~~~~~~~ilr~~~v~g~~~~  160 (287)
                        + +..++....++ +.|+|.-..
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence              2 34577777777 778886433

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.62  E-value=0.00011  Score=62.03  Aligned_cols=75  Identities=16%  Similarity=0.091  Sum_probs=46.9

Q ss_pred             CCcccchHHHHHHHHHHCC-------CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      |||+|++|++++..|+..+       .+|+++++++...  .+.. ...++..   -......|.....++.+.++  ++
T Consensus         8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~--~~~g-~~~Dl~d---~~~~~~~~~~~~~~~~~~l~--~a   79 (325)
T cd01336           8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK--ALEG-VVMELQD---CAFPLLKSVVATTDPEEAFK--DV   79 (325)
T ss_pred             ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc--cccc-eeeehhh---ccccccCCceecCCHHHHhC--CC
Confidence            6999999999999998844       5899999965321  1110 0001110   00011224433455667777  99


Q ss_pred             cEEEEccCCC
Q 023078           74 DVVYDINGRE   83 (287)
Q Consensus        74 d~vi~~a~~~   83 (287)
                      |+|||+||..
T Consensus        80 DiVI~tAG~~   89 (325)
T cd01336          80 DVAILVGAMP   89 (325)
T ss_pred             CEEEEeCCcC
Confidence            9999999974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=97.57  E-value=0.00023  Score=59.81  Aligned_cols=145  Identities=18%  Similarity=0.165  Sum_probs=82.7

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|.+|+.++..|..++  .++.+++.++.. ...+      ++.  +........++.+.+++.+.++  ++|+|||
T Consensus        24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~------Dl~--~~~~~~~i~~~~~~~d~~~~l~--~aDiVVi   92 (323)
T PLN00106         24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAA------DVS--HINTPAQVRGFLGDDQLGDALK--GADLVII   92 (323)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEc------hhh--hCCcCceEEEEeCCCCHHHHcC--CCCEEEE
Confidence            6889999999999999765  489999987621 1111      111  1111112234434445677788  9999999


Q ss_pred             ccCCCcc--------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCC--CCCCCCCCCCCccc-cchHHHHHHH
Q 023078           79 INGREAD--------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~--~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      ++|....              ..+++.+.++  +...+++++|--+-+...-.  .........|...+ .++...+++-
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            9997322              2455566655  67788887775442100000  01122233344444 5566666543


Q ss_pred             ----HhcCCcEEEEccCceecC
Q 023078          140 ----ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       140 ----~~~~~~~~ilr~~~v~g~  157 (287)
                          +..+++...+.. .++|.
T Consensus       173 ~~lA~~lgv~~~~V~~-~ViGe  193 (323)
T PLN00106        173 TFVAEKKGLDPADVDV-PVVGG  193 (323)
T ss_pred             HHHHHHhCCChhheEE-EEEEe
Confidence                356777666644 45554

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.51  E-value=0.00034  Score=55.89  Aligned_cols=88  Identities=25%  Similarity=0.350  Sum_probs=67.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|..+++.|.++|++|+++.+++....+....         ......+.+|-++++.+.++ ++  ++|+++-..+
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~   75 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG   75 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence            789999999999999999999999998875432221         14678889999999999988 55  8999998887


Q ss_pred             CCccchHHHHHhCC--CCCcEE
Q 023078           82 READEVEPILDALP--NLEQFI  101 (287)
Q Consensus        82 ~~~~~~~~l~~a~~--~~~~~i  101 (287)
                      .+........-+++  +++++|
T Consensus        76 ~d~~N~i~~~la~~~~gv~~vi   97 (225)
T COG0569          76 NDEVNSVLALLALKEFGVPRVI   97 (225)
T ss_pred             CCHHHHHHHHHHHHhcCCCcEE
Confidence            76554433333333  677665

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.46  E-value=0.00036  Score=54.51  Aligned_cols=76  Identities=21%  Similarity=0.227  Sum_probs=55.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|+.+++.|.+.|++|++++|+..+... +.    ..+.. ..+..+..+|..+.+++.+.++  ++|+||++.
T Consensus        34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~-l~----~~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at  105 (194)
T cd01078          34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQK-AA----DSLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG  105 (194)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HH----HHHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence            5899999999999999999999999998655221 11    00100 1244566778888888888888  899999876


Q ss_pred             CCCc
Q 023078           81 GREA   84 (287)
Q Consensus        81 ~~~~   84 (287)
                      ....
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            5443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.38  E-value=0.00013  Score=59.89  Aligned_cols=82  Identities=20%  Similarity=0.142  Sum_probs=57.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      .|||||.|..++++|.++|.+-.+-.|+..+......        +  -+.+.-...+.+++.+.+.+.  +.++|+||+
T Consensus        12 YGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~--------~--LG~~~~~~p~~~p~~~~~~~~--~~~VVlncv   79 (382)
T COG3268          12 YGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRA--------S--LGPEAAVFPLGVPAALEAMAS--RTQVVLNCV   79 (382)
T ss_pred             EccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHH--------h--cCccccccCCCCHHHHHHHHh--cceEEEecc
Confidence            3999999999999999999888888888776321111        1  122222334445888888888  999999999


Q ss_pred             CCCccchHHHHHhC
Q 023078           81 GREADEVEPILDAL   94 (287)
Q Consensus        81 ~~~~~~~~~l~~a~   94 (287)
                      |+...-...++++|
T Consensus        80 GPyt~~g~plv~aC   93 (382)
T COG3268          80 GPYTRYGEPLVAAC   93 (382)
T ss_pred             ccccccccHHHHHH
Confidence            98655444444444

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.27  E-value=0.00083  Score=58.19  Aligned_cols=64  Identities=16%  Similarity=0.095  Sum_probs=48.6

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc--CCccEEEEccC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~d~vi~~a~   81 (287)
                      ||.+|.++++.|.++|++|++++++.+.   ..           ..+  +...|+++.+++.+++..  ..+|++||+||
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~---~~-----------~~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVNL---PT-----------PAG--VKRIDVESAQEMLDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCccc---cC-----------CCC--cEEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence            8999999999999999999999987531   11           122  235688887777776643  26899999998


Q ss_pred             CC
Q 023078           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus       277 v~  278 (399)
T PRK05579        277 VA  278 (399)
T ss_pred             cc
Confidence            74

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.21  E-value=0.00047  Score=55.14  Aligned_cols=65  Identities=22%  Similarity=0.334  Sum_probs=44.0

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccEE
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVV   76 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~v   76 (287)
                      .+||.+|.++++.|+++|++|+++++.... .   .          ..   ...+|+.+.+...+.++.     ..+|++
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~---~----------~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-K---P----------EP---HPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhhc-c---c----------cc---CCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999999999998763211 0   0          00   124577665554443321     168999


Q ss_pred             EEccCCC
Q 023078           77 YDINGRE   83 (287)
Q Consensus        77 i~~a~~~   83 (287)
                      ||+||..
T Consensus        85 VnnAgv~   91 (227)
T TIGR02114        85 IHSMAVS   91 (227)
T ss_pred             EECCEec
Confidence            9999864

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.12  E-value=0.00098  Score=57.44  Aligned_cols=96  Identities=20%  Similarity=0.253  Sum_probs=60.1

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~   78 (287)
                      .||||++|+.|++.|.++ ..+|+.+.+..+. .+.+..          ....+..+|..+.+.+... ++  ++|+||.
T Consensus        44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~  110 (381)
T PLN02968         44 LGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC  110 (381)
T ss_pred             ECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence            499999999999999998 5799999886443 222110          1112222343322222222 44  8999998


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEeeeeEeec
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss~~~y~~  111 (287)
                      +.+.  .....++.+++...++|-.|+.+.+.+
T Consensus       111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLRD  141 (381)
T ss_pred             cCCH--HHHHHHHHHHhCCCEEEEcCchhccCC
Confidence            7654  355566666553368999998876543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.02  E-value=0.0013  Score=56.09  Aligned_cols=82  Identities=11%  Similarity=0.044  Sum_probs=53.7

Q ss_pred             CCcccchHHH--HHHHHHHCCCeEEEEecCCccccccC------CCC-CchhhhhhcCCcEEEEecCCChHHHHhhhccC
Q 023078            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQL------PGE-SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   71 (287)
                      |||++-+|.+  +++.| ++|.+|+++++.........      ... ......+....+..+.+|+++++.+.++++..
T Consensus        47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I  125 (398)
T PRK13656         47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI  125 (398)
T ss_pred             ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            7999999999  89999 99999999886432211100      000 01111222234667899999987776665531


Q ss_pred             -----CccEEEEccCCC
Q 023078           72 -----GFDVVYDINGRE   83 (287)
Q Consensus        72 -----~~d~vi~~a~~~   83 (287)
                           ++|++||+++..
T Consensus       126 ~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        126 KQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHhcCCCCEEEECCccC
Confidence                 699999998763

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=96.95  E-value=0.035  Score=43.68  Aligned_cols=191  Identities=13%  Similarity=0.141  Sum_probs=105.3

Q ss_pred             cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccEEEEc
Q 023078            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDVVYDI   79 (287)
Q Consensus         5 G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~vi~~   79 (287)
                      --|+..|++.|.++|.++......+.- .+..     .++.+......+++||.++.+++.+++...     +.|.++|+
T Consensus        18 rSIAwGIAk~l~~~GAeL~fTy~~e~l-~krv-----~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHs   91 (259)
T COG0623          18 RSIAWGIAKALAEQGAELAFTYQGERL-EKRV-----EELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHS   91 (259)
T ss_pred             ccHHHHHHHHHHHcCCEEEEEeccHHH-HHHH-----HHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEE
Confidence            358899999999999999988887632 2111     122222223457899999998888877642     79999999


Q ss_pred             cCCCcc------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccc
Q 023078           80 NGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (287)
Q Consensus        80 a~~~~~------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~  131 (287)
                      .+....                        ....+.++++    ....+|-++    |-+..+      ..++-......
T Consensus        92 IaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r------~vPnYNvMGvA  161 (259)
T COG0623          92 IAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSER------VVPNYNVMGVA  161 (259)
T ss_pred             eccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----ecccee------ecCCCchhHHH
Confidence            887321                        1222333332    222333222    211111      01111112378


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCC--CCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPL--NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      |...|.-++       ..|+++.-+-.|.+=--.  .... ...++....+..|+         .--+..+||+.....+
T Consensus       162 KAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~-f~~~l~~~e~~aPl---------~r~vt~eeVG~tA~fL  231 (259)
T COG0623         162 KAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD-FRKMLKENEANAPL---------RRNVTIEEVGNTAAFL  231 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc-HHHHHHHHHhhCCc---------cCCCCHHHhhhhHHHH
Confidence            888886542       346777666664331100  0011 12233333333222         2235589999988888


Q ss_pred             hcC--CcCCCceEEeeCCCcc
Q 023078          203 LGN--EKASRQVFNISGEKYV  221 (287)
Q Consensus       203 ~~~--~~~~~~~~~~~~~~~~  221 (287)
                      +..  ..-.|++.++.+|-.+
T Consensus       232 lSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         232 LSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             hcchhcccccceEEEcCCcee
Confidence            765  2337889888877543

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.88  E-value=0.0011  Score=55.81  Aligned_cols=64  Identities=22%  Similarity=0.252  Sum_probs=44.5

Q ss_pred             CCcccchHHHHHHHHHHC-C-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|++|+.++++|+++ | .+++++.|+..+... +.           .  ++..+++.   .+.+++.  ++|+|||
T Consensus       161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La-----------~--el~~~~i~---~l~~~l~--~aDiVv~  221 (340)
T PRK14982        161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQ-----------A--ELGGGKIL---SLEEALP--EADIVVW  221 (340)
T ss_pred             EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HH-----------H--HhccccHH---hHHHHHc--cCCEEEE
Confidence            799999999999999864 5 689999987654221 11           0  11123332   3557777  8999999


Q ss_pred             ccCCC
Q 023078           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      +++..
T Consensus       222 ~ts~~  226 (340)
T PRK14982        222 VASMP  226 (340)
T ss_pred             CCcCC
Confidence            99863

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.71  E-value=0.005  Score=47.46  Aligned_cols=65  Identities=15%  Similarity=0.191  Sum_probs=40.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||..|..|++.+..+|++|+.+.....-.   .           +.+++.++..-.+  .+.+.+.+.  +.|++||+|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~---~-----------p~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLP---P-----------PPGVKVIRVESAEEMLEAVKELLP--SADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcccc---c-----------cccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence            689999999999999999999999974221   0           2466666644322  244445555  679999999


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      ++.
T Consensus        91 AVs   93 (185)
T PF04127_consen   91 AVS   93 (185)
T ss_dssp             B--
T ss_pred             chh
Confidence            873

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=96.67  E-value=0.0099  Score=47.31  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=52.6

Q ss_pred             CCcccchHHHHHHHHHHCC-----CeEEEEecCCccccccCCCCCchhhhhh----cCCcEEEEecCCChHH-------H
Q 023078            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDF-------V   64 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~-------~   64 (287)
                      ||+++.+|-+|+..|++..     .++.+.+|+-+++.+.-.     .+...    ..+++++..|+++-.+       +
T Consensus         9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~-----~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCA-----ALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHH-----HHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            7999999999999999863     356778888776432211     11111    2467889999998544       3


Q ss_pred             HhhhccCCccEEEEccCC
Q 023078           65 KSSLSAKGFDVVYDINGR   82 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~   82 (287)
                      .+-++  ..|.|+-.||.
T Consensus        84 ~~rf~--~ld~iylNAg~   99 (341)
T KOG1478|consen   84 KQRFQ--RLDYIYLNAGI   99 (341)
T ss_pred             HHHhh--hccEEEEcccc
Confidence            44455  79999988886

>PRK05086 malate dehydrogenase; Provisional

Probab=96.62  E-value=0.0053  Score=51.63  Aligned_cols=94  Identities=19%  Similarity=0.235  Sum_probs=56.1

Q ss_pred             CCcccchHHHHHHHHHH-C--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      +||||.+|++++..|.. .  ++++++++|++.. ..     ...++.. ......+.+  .+.+++.+.++  ++|+||
T Consensus         6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g-----~alDl~~-~~~~~~i~~--~~~~d~~~~l~--~~DiVI   74 (312)
T PRK05086          6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PG-----VAVDLSH-IPTAVKIKG--FSGEDPTPALE--GADVVL   74 (312)
T ss_pred             ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cc-----eehhhhc-CCCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence            59999999999998855 2  4688888887432 10     0011111 011223333  22334455666  899999


Q ss_pred             EccCCCcc--------------chHHHHHhCC--CCCcEEEEee
Q 023078           78 DINGREAD--------------EVEPILDALP--NLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~--------------~~~~l~~a~~--~~~~~i~~Ss  105 (287)
                      .++|....              ...+++++++  +.+++|.+.|
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99997432              2445566655  6677776665

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.61  E-value=0.023  Score=44.46  Aligned_cols=106  Identities=16%  Similarity=0.207  Sum_probs=64.4

Q ss_pred             CcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCC----------------CchhhhhhcCCcEEE--EecCCC-h
Q 023078            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGE----------------SDQEFAEFSSKILHL--KGDRKD-Y   61 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~d~~~-~   61 (287)
                      |++| +|..+++.|...| .++++++.+.-.....-+..                ....+.+..+.+++.  ..++.+ .
T Consensus        26 G~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~  104 (198)
T cd01485          26 GAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSND  104 (198)
T ss_pred             CCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccch
Confidence            5555 9999999999999 46888887643211111100                012233444555443  344432 4


Q ss_pred             HHHHhhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEeec
Q 023078           62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      +...+.++  ++|+||.+.. +......+-+.|+ ...++|+.++.+.||.
T Consensus       105 ~~~~~~~~--~~dvVi~~~d-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485         105 SNIEEYLQ--KFTLVIATEE-NYERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             hhHHHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            45566677  8999997643 3444445666677 6678999988777764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd00704 MDH Malate dehydrogenase

Probab=96.49  E-value=0.0063  Score=51.36  Aligned_cols=29  Identities=21%  Similarity=0.151  Sum_probs=24.6

Q ss_pred             CCcccchHHHHHHHHHHCC-------CeEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~   29 (287)
                      |||+|.+|+.++..|..++       ++++++++++
T Consensus         6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            6999999999999998764       2599999876

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.37  E-value=0.0072  Score=50.31  Aligned_cols=74  Identities=12%  Similarity=0.136  Sum_probs=50.7

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCC---ccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      +|| |-+|++++..|.+.|.+ |+++.|+.   ++..+ +.    ..+......+.+...|+.+.+++.+.++  ..|+|
T Consensus       132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~-l~----~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Dil  203 (289)
T PRK12548        132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQ-TA----EKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDIL  203 (289)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHH-HH----HHHhhcCCCceeEEechhhhhHHHhhhc--cCCEE
Confidence            477 89999999999999975 99999986   33211 11    1111112334556678887777777777  77999


Q ss_pred             EEccCC
Q 023078           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            987654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.32  E-value=0.0067  Score=53.99  Aligned_cols=68  Identities=15%  Similarity=0.255  Sum_probs=53.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+++++.|.++|++|+++++++........          ..+++++.+|.++.+.+.++ ++  ++|.|+-+..
T Consensus         7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~   74 (453)
T PRK09496          7 GAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD   74 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence            34999999999999999999999998766322111          14678999999999888887 66  8999987655


Q ss_pred             C
Q 023078           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        75 ~   75 (453)
T PRK09496         75 S   75 (453)
T ss_pred             C
Confidence            4

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.28  E-value=0.01  Score=50.21  Aligned_cols=31  Identities=19%  Similarity=0.186  Sum_probs=25.1

Q ss_pred             CCcccchHHHHHHHHHHCC-------CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~   31 (287)
                      +||+|.+|+.++..|...+       ++++++++.+..
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~   42 (324)
T TIGR01758         5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM   42 (324)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence            6899999999999998754       269999986543

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.28  E-value=0.0087  Score=42.29  Aligned_cols=69  Identities=17%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|.+.+.+|+++++++.......           ..++.++.||.++++.+.++-- .+++.|+-+...
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~~   72 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTDD   72 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESSS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcCc-cccCEEEEccCC
Confidence            5688999999999997779999999977632221           3568899999999998887633 388988876664


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus        73 d   73 (116)
T PF02254_consen   73 D   73 (116)
T ss_dssp             H
T ss_pred             H
Confidence            3

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.28  E-value=0.011  Score=46.33  Aligned_cols=169  Identities=15%  Similarity=0.136  Sum_probs=94.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEe--------cCCChH---HHHhhhc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--------DRKDYD---FVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~~~---~~~~~~~   69 (287)
                      ||+|..||..++..+..++.+.....++...+.              ..+.....+        |.+...   ++.++.+
T Consensus        12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--------------~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r   77 (253)
T KOG1204|consen   12 TGASRGIGTGSVATILAEDDEALRYGVARLLAE--------------LEGLKVAYGDDFVHVVGDITEEQLLGALREAPR   77 (253)
T ss_pred             ecCCCCccHHHHHHHHhcchHHHHHhhhccccc--------------ccceEEEecCCcceechHHHHHHHHHHHHhhhh
Confidence            799999999999999988765444443332211              123333333        333322   2222222


Q ss_pred             c--CCccEEEEccCCCcc-----------------------c----hHHHHHhCC-C--CCcEEEEeeeeEeecCCCCCC
Q 023078           70 A--KGFDVVYDINGREAD-----------------------E----VEPILDALP-N--LEQFIYCSSAGVYLKSDLLPH  117 (287)
Q Consensus        70 ~--~~~d~vi~~a~~~~~-----------------------~----~~~l~~a~~-~--~~~~i~~Ss~~~y~~~~~~~~  117 (287)
                      .  -+-|.|||.||.-..                       .    ....+..++ .  .+.+|++||....        
T Consensus        78 ~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav--------  149 (253)
T KOG1204|consen   78 KKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV--------  149 (253)
T ss_pred             hcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh--------
Confidence            1  268999999986211                       0    112233334 2  4778999987652        


Q ss_pred             CCCCCCCCCccc-cchHHHHHHH-----Hhc-CCcEEEEccCceecCCC-----CCchhHH---HHHHHHcCCCcccCCC
Q 023078          118 CETDTVDPKSRH-KGKLNTESVL-----ESK-GVNWTSLRPVYIYGPLN-----YNPVEEW---FFHRLKAGRPIPIPGS  182 (287)
Q Consensus       118 ~e~~~~~p~~~~-~~k~~~E~~~-----~~~-~~~~~ilr~~~v~g~~~-----~~~~~~~---~~~~~~~~~~~~~~~~  182 (287)
                         .+......| .+|.+.+.+.     +++ ++.+..++||.+=-+-+     ...+-+.   +++.+++.        
T Consensus       150 ---~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~--------  218 (253)
T KOG1204|consen  150 ---RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES--------  218 (253)
T ss_pred             ---ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc--------
Confidence               111222236 8888877765     344 78889999987644421     1112222   22332222        


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCC
Q 023078          183 GIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       183 ~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                          -.++...+.|+.+..++++.
T Consensus       219 ----~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  219 ----GQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             ----CCcCChhhHHHHHHHHHHhc
Confidence                23455677888888888764

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.11  E-value=0.015  Score=49.56  Aligned_cols=86  Identities=17%  Similarity=0.178  Sum_probs=50.9

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.+++|   ++.++++..+. .+.+.          ..+......|+.+.     .++  ++|+||
T Consensus         7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~-g~~l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf   68 (334)
T PRK14874          7 VGATGAVGREMLNILEERNFPVDKLRLLASARSA-GKELS----------FKGKELKVEDLTTF-----DFS--GVDIAL   68 (334)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC-CCeee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence            49999999999999999776   45778776443 22221          11233444455322     234  899999


Q ss_pred             EccCCCccchHHHHHhC-C-CCCcEEEEeeee
Q 023078           78 DINGREADEVEPILDAL-P-NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~-~-~~~~~i~~Ss~~  107 (287)
                      .+++..  ....++..+ . +. ++|=.|+..
T Consensus        69 ~A~g~g--~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         69 FSAGGS--VSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             ECCChH--HHHHHHHHHHhCCC-EEEECCchh
Confidence            887644  233333332 3 44 555556543

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.08  E-value=0.019  Score=48.35  Aligned_cols=103  Identities=17%  Similarity=0.185  Sum_probs=55.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCC--CchhhhhhcCCc------EEEEecCCChHHHHhhhccCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKI------LHLKGDRKDYDFVKSSLSAKGFD   74 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~d   74 (287)
                      |+|.+|..++..|+++|++|++++|++..........  ....+..  .+.      .-....+.-..++.++++  ++|
T Consensus         9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~--~g~~~~~~~~~~~~~i~~~~~~~~a~~--~ad   84 (308)
T PRK06129          9 GAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAA--FDLLDGEAPDAVLARIRVTDSLADAVA--DAD   84 (308)
T ss_pred             CccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCchhhHHHHhcCeEEECcHHHhhC--CCC
Confidence            4899999999999999999999999875422100000  0000000  000      000000111123445566  899


Q ss_pred             EEEEccCCCccchHHHHHhCC--CCCcEEEEeeeeEe
Q 023078           75 VVYDINGREADEVEPILDALP--NLEQFIYCSSAGVY  109 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~--~~~~~i~~Ss~~~y  109 (287)
                      +|+.+..........++..+.  .....++.||+..+
T Consensus        85 ~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         85 YVQESAPENLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             EEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence            999887665444444544433  22345556766543

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.96  E-value=0.025  Score=40.37  Aligned_cols=30  Identities=23%  Similarity=0.420  Sum_probs=23.5

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~   30 (287)
                      +||||++|+.|++.|.+.. .++..+..+..
T Consensus         5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    5 VGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             ESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             ECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            4999999999999999974 56666555444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=95.92  E-value=0.024  Score=49.11  Aligned_cols=65  Identities=18%  Similarity=0.231  Sum_probs=47.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHH-Hhhhcc--CCccEEEEc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~--~~~d~vi~~   79 (287)
                      +||.+|..+++.|..+|++|+++.+.....   .           ..++  ...|+.+.+++ ..+++.  .++|++|++
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~-----------~~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~  272 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL---T-----------PPGV--KSIKVSTAEEMLEAALNELAKDFDIFISA  272 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC---C-----------CCCc--EEEEeccHHHHHHHHHHhhcccCCEEEEc
Confidence            368899999999999999999999765431   1           1222  45688877776 444421  268999999


Q ss_pred             cCCC
Q 023078           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ||..
T Consensus       273 Aavs  276 (390)
T TIGR00521       273 AAVA  276 (390)
T ss_pred             cccc
Confidence            9974

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=95.72  E-value=0.006  Score=37.76  Aligned_cols=47  Identities=15%  Similarity=-0.099  Sum_probs=20.3

Q ss_pred             HHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccceeeeec
Q 023078          229 ACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSMLAFYIC  286 (287)
Q Consensus       229 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~~~~~~~  286 (287)
                      ++.++.|++. .+...+.          .++.... +.|++|++++|||+|.+.-.-||
T Consensus         1 A~e~vtG~~i-~~~~~~r----------R~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i   48 (62)
T PF13950_consen    1 AFEKVTGKKI-PVEYAPR----------RPGDPAHLVADISKAREELGWKPKYSLEDMI   48 (62)
T ss_dssp             HHHHHHTS----EEEE-------------TT--SEE-B--HHHHHHC----SSSHHHHH
T ss_pred             CcHHHHCCCC-CceECCC----------CCCchhhhhCCHHHHHHHhCCCcCCCHHHHH
Confidence            3567888776 3332221          1222223 89999999999999988544443

...

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.67  E-value=0.039  Score=45.60  Aligned_cols=92  Identities=16%  Similarity=0.174  Sum_probs=62.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+.| +|+-=++....-|++|+++++++++..+...          .-+.+.+-.-..|++.+.++..  .-|.++|+.
T Consensus       188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v  254 (360)
T KOG0023|consen  188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV  254 (360)
T ss_pred             ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence            47777 8887777766779999999999866443333          2455555544448888888777  566666655


Q ss_pred             CC-CccchHHHHHhCCCCCcEEEEee
Q 023078           81 GR-EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~-~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      .. .......+++.++...++|+++-
T Consensus       255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~  280 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNGTLVLVGL  280 (360)
T ss_pred             eeccccchHHHHHHhhcCCEEEEEeC
Confidence            42 23345567777886678888774

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.58  E-value=0.012  Score=44.53  Aligned_cols=93  Identities=18%  Similarity=0.183  Sum_probs=50.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCC--CchhhhhhcCCcEEEEecCCChHHHHhhhcc-------CCc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~~~   73 (287)
                      |.|-.|+.+++.|+++|++|++.+|++++..+.....  ......+......++-.-+.+.+++++++..       ..-
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            5689999999999999999999999876633222110  0000011112223444444454444444432       134


Q ss_pred             cEEEEccCCCccchHHHHHhCC
Q 023078           74 DVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~a~~   95 (287)
                      .++|++........+.+.+.++
T Consensus        88 ~iiid~sT~~p~~~~~~~~~~~  109 (163)
T PF03446_consen   88 KIIIDMSTISPETSRELAERLA  109 (163)
T ss_dssp             EEEEE-SS--HHHHHHHHHHHH
T ss_pred             eEEEecCCcchhhhhhhhhhhh
Confidence            5666777777666666666664

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=95.57  E-value=0.025  Score=48.18  Aligned_cols=85  Identities=15%  Similarity=0.214  Sum_probs=49.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEE---EEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~---~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.|++.|.+++|.+.   .+.+..+. .+.+.          ..+......|+. .+    .++  ++|+||
T Consensus         5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~-g~~~~----------~~~~~~~~~~~~-~~----~~~--~~D~v~   66 (339)
T TIGR01296         5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSA-GRKVT----------FKGKELEVNEAK-IE----SFE--GIDIAL   66 (339)
T ss_pred             EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC-CCeee----------eCCeeEEEEeCC-hH----Hhc--CCCEEE
Confidence            49999999999999999877644   44455332 22221          123444555553 22    234  899999


Q ss_pred             EccCCCccchHHHHHh-CC-CCCcEEEEeee
Q 023078           78 DINGREADEVEPILDA-LP-NLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a-~~-~~~~~i~~Ss~  106 (287)
                      .+++....  ..++.. ++ |+ ++|=.|+.
T Consensus        67 ~a~g~~~s--~~~a~~~~~~G~-~VID~ss~   94 (339)
T TIGR01296        67 FSAGGSVS--KEFAPKAAKCGA-IVIDNTSA   94 (339)
T ss_pred             ECCCHHHH--HHHHHHHHHCCC-EEEECCHH
Confidence            98876522  223332 23 54 45545553

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.56  E-value=0.024  Score=48.14  Aligned_cols=88  Identities=15%  Similarity=0.154  Sum_probs=48.5

Q ss_pred             CCcccchHHHHHHHHHHCCCe---EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      +||||++|+.|++.|.+++|.   +..+. +.++..+.+.          ..+   ...++.+.+.. + ++  ++|+|+
T Consensus        10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~-s~~~aG~~l~----------~~~---~~l~~~~~~~~-~-~~--~vD~vF   71 (336)
T PRK05671         10 VGATGTVGEALVQILEERDFPVGTLHLLA-SSESAGHSVP----------FAG---KNLRVREVDSF-D-FS--QVQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhhCCCCceEEEEEE-CcccCCCeec----------cCC---cceEEeeCChH-H-hc--CCCEEE
Confidence            599999999999999987653   33443 3333222221          112   12233222221 1 44  899999


Q ss_pred             EccCCCccchHHHHHhCC-CCCcEEEEeeeeE
Q 023078           78 DINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~  108 (287)
                      .+.+.  .....++..+. ...++|=.|+..-
T Consensus        72 la~p~--~~s~~~v~~~~~~G~~VIDlS~~fR  101 (336)
T PRK05671         72 FAAGA--AVSRSFAEKARAAGCSVIDLSGALP  101 (336)
T ss_pred             EcCCH--HHHHHHHHHHHHCCCeEEECchhhc
Confidence            87763  23344555543 2235666666554

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.56  E-value=0.19  Score=42.87  Aligned_cols=105  Identities=19%  Similarity=0.271  Sum_probs=65.9

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC----------------CchhhhhhcCCc--EEEEecCCChHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE----------------SDQEFAEFSSKI--LHLKGDRKDYDF   63 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~----------------~~~~~~~~~~~~--~~~~~d~~~~~~   63 (287)
                      |.|.+|++++..|.+.|. ++++++++.-.....-+..                ....+.+..+.+  +.+..+++ .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~~  109 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AEE  109 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            569999999999999996 8999988642211111100                012223333443  44455554 455


Q ss_pred             HHhhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEeec
Q 023078           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      +.++++  ++|+||.+.. +...-..+.++|. ..+++|+.+..+.||.
T Consensus       110 ~~~~~~--~~DlVid~~D-n~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688        110 LEELVT--GVDLIIDATD-NFETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             HHHHHc--CCCEEEEcCC-CHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            677787  8999998755 3333334556666 5578999888887774

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.52  E-value=0.039  Score=49.10  Aligned_cols=70  Identities=30%  Similarity=0.406  Sum_probs=52.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|.+.|++|++++++++.... +        .....++.++.||.++.+.+.++-- .++|+||-+...
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~-~--------~~~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~  307 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEE-L--------AEELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND  307 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH-H--------HHHCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence            45999999999999999999999998765321 1        1112467889999999988865442 378999866554

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.46  E-value=0.092  Score=44.72  Aligned_cols=104  Identities=17%  Similarity=0.233  Sum_probs=63.8

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC----------------CchhhhhhcCCc--EEEEecCCChHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE----------------SDQEFAEFSSKI--LHLKGDRKDYDF   63 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~----------------~~~~~~~~~~~~--~~~~~d~~~~~~   63 (287)
                      |.|-+|+++++.|.+.|. ++++++++.-.....-+..                ....+.+..+.+  +.+..|++ .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~~  109 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VEE  109 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            457799999999999996 8888888753211111100                012223333444  44555664 456


Q ss_pred             HHhhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        64 ~~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.++++  ++|+||.+... ...-..+-++|. ...++|+.+..+.+|
T Consensus       110 ~~~~~~--~~DlVid~~D~-~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        110 LEELVK--EVDLIIDATDN-FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             HHHHhc--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            777787  89999988743 232233445555 556888888777666

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.41  E-value=0.16  Score=37.04  Aligned_cols=104  Identities=15%  Similarity=0.172  Sum_probs=65.0

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCc--EEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-...              ....+.+..+.+  +.+..++ +.+.+.
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~   87 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE   87 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence            678999999999999995 7888887654322221111              112223333444  4444455 456677


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.++  ++|+||.+... ......+.+.|+ ..+++|+.+..+.+|
T Consensus        88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            8887  89999987654 333344556666 666888888766554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.36  E-value=0.031  Score=47.22  Aligned_cols=141  Identities=13%  Similarity=0.123  Sum_probs=75.2

Q ss_pred             CCcccchHHHHHHHHHHCCC-------eEEEEecCCccccccCCCCCchhhhhh----cCCcEEEEecCCChHHHHhhhc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~   69 (287)
                      +||+|.+|+.++..|+..+.       ++++++..+... .....  ..++...    ..++++. .  .+    .+.++
T Consensus         8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~-~a~g~--a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~   77 (322)
T cd01338           8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALK-ALEGV--AMELEDCAFPLLAEIVIT-D--DP----NVAFK   77 (322)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCccc-cccee--ehhhhhccccccCceEEe-c--Cc----HHHhC
Confidence            58899999999999998763       799998854320 00000  1111100    0122221 1  12    34455


Q ss_pred             cCCccEEEEccCCCccc--------------hHHHHHhCC--C--CCcEEEEeeee---EeecCCCCCCCCCCC-CCCCc
Q 023078           70 AKGFDVVYDINGREADE--------------VEPILDALP--N--LEQFIYCSSAG---VYLKSDLLPHCETDT-VDPKS  127 (287)
Q Consensus        70 ~~~~d~vi~~a~~~~~~--------------~~~l~~a~~--~--~~~~i~~Ss~~---~y~~~~~~~~~e~~~-~~p~~  127 (287)
                        ++|+||.++|.....              .+.+.+.+.  .  ...+|.+|...   +|-      ...... ..+..
T Consensus        78 --daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~sg~~p~~~  149 (322)
T cd01338          78 --DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI------AMKNAPDIPPDN  149 (322)
T ss_pred             --CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH------HHHHcCCCChHh
Confidence              999999999874321              222333332  2  33455555311   000      001111 22233


Q ss_pred             cc-cchHHHHHHH----HhcCCcEEEEccCceecCCC
Q 023078          128 RH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (287)
Q Consensus       128 ~~-~~k~~~E~~~----~~~~~~~~ilr~~~v~g~~~  159 (287)
                      .+ .++...+++.    +..+++...+|...|||+..
T Consensus       150 ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         150 FTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             eEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            34 5666666654    35689999999888999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.23  E-value=0.045  Score=44.97  Aligned_cols=63  Identities=17%  Similarity=0.092  Sum_probs=52.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||-+|+.++-.+.+-|-+|++++|-.....-+..            . .-+-.|+.|.+.+..+++..+||.||-
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA------------h-rs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA------------H-RSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh------------h-heeeeeccCHHHHHHHHHhhCCCeeee
Confidence            78999999999999999999999998766433332            1 124579999999999999999999994

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.20  E-value=0.091  Score=38.67  Aligned_cols=102  Identities=15%  Similarity=0.130  Sum_probs=60.8

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCC--------------CCchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-+.              .....+.+..+.+++  +..++.+. ...
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~~-~~~   84 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISED-NLD   84 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecChh-hHH
Confidence            469999999999999996 788887654221111110              011222333344443  44444332 335


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeE
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~  108 (287)
                      +.++  ++|+||.+... ......+.++|+ ....++..++.+.
T Consensus        85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~  125 (143)
T cd01483          85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGL  125 (143)
T ss_pred             HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence            6666  89999987765 344455667777 5567877776553

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.16  E-value=0.048  Score=49.98  Aligned_cols=69  Identities=12%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|.++|++|+++++++++... ..          ..+...+.||.+|++.++++-- .++|.++-..+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~-~~----------~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~~  491 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDE-LR----------ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIPN  491 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHH-HH----------HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcCC
Confidence            67999999999999999999999998776322 21          2578899999999988876532 378877755444


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      +
T Consensus       492 ~  492 (558)
T PRK10669        492 G  492 (558)
T ss_pred             h
Confidence            3

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.11  E-value=0.2  Score=39.35  Aligned_cols=104  Identities=16%  Similarity=0.109  Sum_probs=63.0

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCC--------------CCchhhhhhcCCcEEE--EecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHL--KGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-+.              .....+.+..+.+++.  ...+ +.+.+.
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  106 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-TAENLE  106 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-CHHHHH
Confidence            578999999999999995 888888864321111000              0112233334444433  3333 345667


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.++  ++|+||.+... ...-..+.+.|+ ..+.+|+.+..+.+|
T Consensus       107 ~~~~--~~D~Vi~~~d~-~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356       107 LLIN--NVDLVLDCTDN-FATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             HHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            7787  89999987643 333333555666 567888888766655

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK04148 hypothetical protein; Provisional

Probab=95.06  E-value=0.036  Score=40.07  Aligned_cols=76  Identities=13%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+| -|.+++..|.+.|++|++++.++.......           ...+..+.+|+.+++.  ++-+  ++|+|+.+-..
T Consensus        24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~--~~y~--~a~liysirpp   87 (134)
T PRK04148         24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIRPP   87 (134)
T ss_pred             Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeCCC
Confidence            456 778899999999999999999987632111           2467899999988652  2233  78998865432


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                       .+-...+++.++
T Consensus        88 -~el~~~~~~la~   99 (134)
T PRK04148         88 -RDLQPFILELAK   99 (134)
T ss_pred             -HHHHHHHHHHHH
Confidence             234445566655

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.84  E-value=0.21  Score=40.01  Aligned_cols=104  Identities=14%  Similarity=0.139  Sum_probs=62.2

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCC--------------CCchhhhhhcCC--cEEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~~d~~~~~~~~   65 (287)
                      |.|-+|+++++.|...|. ++++++.+.-.....-+.              .....+.+..+.  ++.+..++ +.+.+.
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~~  106 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENAE  106 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHHH
Confidence            678999999999999985 677776644221111110              011222333343  34444444 345667


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.++  ++|+||.+... ...-..+.+.|+ ....+|+.+..+.+|
T Consensus       107 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757         107 ELIA--GYDLVLDCTDN-FATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             HHHh--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  89999988663 333344555566 557888887666544

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=94.83  E-value=0.087  Score=43.07  Aligned_cols=81  Identities=16%  Similarity=0.061  Sum_probs=45.8

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|++|.+|+.+++.+.+. +.+++++...........                 -..+....+++.++++  ++|+||++
T Consensus         7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------------~~~~i~~~~dl~~ll~--~~DvVid~   67 (257)
T PRK00048          7 AGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------------GALGVAITDDLEAVLA--DADVLIDF   67 (257)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------------CCCCccccCCHHHhcc--CCCEEEEC
Confidence            588999999999988875 678887554333211110                 0112222344555565  78999988


Q ss_pred             cCCCccchHHHHHhCCCCCcEE
Q 023078           80 NGREADEVEPILDALPNLEQFI  101 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i  101 (287)
                      +.+... ...+..+++..++++
T Consensus        68 t~p~~~-~~~~~~al~~G~~vv   88 (257)
T PRK00048         68 TTPEAT-LENLEFALEHGKPLV   88 (257)
T ss_pred             CCHHHH-HHHHHHHHHcCCCEE
Confidence            854432 333333444334554

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.80  E-value=0.042  Score=47.02  Aligned_cols=95  Identities=16%  Similarity=0.132  Sum_probs=51.2

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEE-EecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      +||||++|+.+++.|.+. +.++..+ +++.+. .+.+.        ...+.+... ..++.+. +..++++  ++|+||
T Consensus         6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~--------~~~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf   73 (346)
T TIGR01850         6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVS--------EVHPHLRGLVDLNLEPI-DEEEIAE--DADVVF   73 (346)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChH--------HhCccccccCCceeecC-CHHHhhc--CCCEEE
Confidence            599999999999999987 5688855 443221 11111        000111111 1112111 1223334  789999


Q ss_pred             EccCCCccchHHHHHhC-CCCCcEEEEeeeeEe
Q 023078           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~-~~~~~~i~~Ss~~~y  109 (287)
                      .+.+..  ....++..+ +..+++|=.|+..-.
T Consensus        74 ~alP~~--~s~~~~~~~~~~G~~VIDlS~~fR~  104 (346)
T TIGR01850        74 LALPHG--VSAELAPELLAAGVKVIDLSADFRL  104 (346)
T ss_pred             ECCCch--HHHHHHHHHHhCCCEEEeCChhhhc
Confidence            877643  334444443 333678888877643

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.78  E-value=0.38  Score=38.88  Aligned_cols=105  Identities=11%  Similarity=0.079  Sum_probs=63.2

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCC--------------CchhhhhhcCCcEEEEecC-CChHHHHh
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLKGDR-KDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~-~~~~~~~~   66 (287)
                      |.|-+|+.++..|.+.| -++++++.+.-.....-+..              ....+.+..+.+++...+- .+.+.+.+
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~~  110 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELAA  110 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHHH
Confidence            67899999999999998 47777777554321111110              0123334445554443322 24456677


Q ss_pred             hhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +++  ++|+||.+.... ..-..+-++|. ..+++|+.++.+.+|
T Consensus       111 ~~~--~~DlVvd~~D~~-~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       111 LIA--EHDIVVDCTDNV-EVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             Hhh--cCCEEEEcCCCH-HHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            787  899999876542 33333455666 667888877655544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.78  E-value=0.4  Score=37.48  Aligned_cols=104  Identities=16%  Similarity=0.119  Sum_probs=60.3

Q ss_pred             CcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCc--EEEEecCCChHHH
Q 023078            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKI--LHLKGDRKDYDFV   64 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~d~~~~~~~   64 (287)
                      |++| +|.++++.|...|. ++++++.+.-.....-...              ....+.+..+.+  +.+...+.  +..
T Consensus        28 G~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~~  104 (197)
T cd01492          28 GLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EKP  104 (197)
T ss_pred             cCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--ccH
Confidence            5444 99999999999995 6888877643311111100              011233334444  33344443  223


Q ss_pred             HhhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEeec
Q 023078           65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      .+.++  ++|+||.+.. +......+-+.|+ ...++|+.++.+.+|.
T Consensus       105 ~~~~~--~~dvVi~~~~-~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  149 (197)
T cd01492         105 EEFFS--QFDVVVATEL-SRAELVKINELCRKLGVKFYATGVHGLFGF  149 (197)
T ss_pred             HHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence            44566  8899997654 3444444556676 5568888888776653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.64  E-value=0.054  Score=48.21  Aligned_cols=69  Identities=23%  Similarity=0.282  Sum_probs=46.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+++ +|..+++.|+++|++|++.+++........    ..++.  ..++.++.+|..+     +...  ++|+||+.+
T Consensus        11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~----~~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~   76 (450)
T PRK14106         11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEA----LEELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP   76 (450)
T ss_pred             ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence            57777 999999999999999999998753211000    01111  2367777777765     2233  789999988


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            763

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.54  E-value=0.13  Score=39.41  Aligned_cols=104  Identities=14%  Similarity=0.164  Sum_probs=60.5

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCC---ccccccCCC----------CCchhhhhhcCCcEE--EEecCCChHHHHh
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLPG----------ESDQEFAEFSSKILH--LKGDRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~---~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~d~~~~~~~~~   66 (287)
                      |.|-+|+.+++.|.+.|. ++++++.+.   +....+.-.          .....+.+..+.+++  +...+ +.+.+.+
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~~~~~~~   84 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-DENNLEG   84 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-ChhhHHH
Confidence            578999999999999996 688888865   221111100          011222333344443  33444 3355677


Q ss_pred             hhccCCccEEEEccCCCccchHHHHHhCC-C-CCcEEEEeeeeEee
Q 023078           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~-~~~~i~~Ss~~~y~  110 (287)
                      .++  ++|+||.+.. +...-..+.+.+. . ...||+.+..+-|+
T Consensus        85 ~l~--~~DlVi~~~d-~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~  127 (174)
T cd01487          85 LFG--DCDIVVEAFD-NAETKAMLAESLLGNKNKPVVCASGMAGFG  127 (174)
T ss_pred             Hhc--CCCEEEECCC-CHHHHHHHHHHHHHHCCCCEEEEehhhccC
Confidence            787  8999998833 3333344555554 3 56777665444443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.52  E-value=0.25  Score=41.76  Aligned_cols=93  Identities=13%  Similarity=0.223  Sum_probs=56.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcE-EEEecC-CChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDR-KDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~-~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|..+++.+...|.+|+++++++++.. .+.        +  .++. ++..+- .+...........++|+|++
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~-~~~--------~--lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d  213 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVA-YLK--------K--LGFDVAFNYKTVKSLEETLKKASPDGYDCYFD  213 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H--cCCCEEEeccccccHHHHHHHhCCCCeEEEEE
Confidence            488999999999888888999999988765521 111        1  1221 221111 12222222222237999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +.|.  ......++.++...+++.++..
T Consensus       214 ~~G~--~~~~~~~~~l~~~G~iv~~G~~  239 (325)
T TIGR02825       214 NVGG--EFSNTVIGQMKKFGRIAICGAI  239 (325)
T ss_pred             CCCH--HHHHHHHHHhCcCcEEEEecch
Confidence            8874  2345667777766688876643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=94.35  E-value=0.079  Score=44.04  Aligned_cols=84  Identities=18%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++..|++.+.....           ..+...+     ..+.+.+.++  +.|+||++...
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-----------~~g~~~~-----~~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLARIT-----------EMGLIPF-----PLNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCCCeee-----cHHHHHHHhc--cCCEEEECCCh
Confidence            4588999999999999999999999865421110           0122211     2345667777  89999998754


Q ss_pred             CccchHHHHHhCCCCCcEEEEee
Q 023078           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ... ....++.++...-+|-++|
T Consensus       220 ~ii-~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       220 LVL-TADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHh-CHHHHhcCCCCeEEEEeCc
Confidence            322 2345555553334444443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.31  E-value=0.041  Score=39.48  Aligned_cols=81  Identities=19%  Similarity=0.142  Sum_probs=45.1

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      .|++|..|+.+++.+.+ .+.++.+. +|+++....+-    ..++    .+..  .....-.+++.++++  .+|++|+
T Consensus         6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d----~g~~----~~~~--~~~~~v~~~l~~~~~--~~DVvID   73 (124)
T PF01113_consen    6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKD----VGEL----AGIG--PLGVPVTDDLEELLE--EADVVID   73 (124)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSB----CHHH----CTSS--T-SSBEBS-HHHHTT--H-SEEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccch----hhhh----hCcC--CcccccchhHHHhcc--cCCEEEE
Confidence            48899999999999999 57886664 45542211000    0000    0110  111111256677777  5999999


Q ss_pred             ccCCCccchHHHHHhCC
Q 023078           79 INGREADEVEPILDALP   95 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~   95 (287)
                      +.  ++..+...++.+.
T Consensus        74 fT--~p~~~~~~~~~~~   88 (124)
T PF01113_consen   74 FT--NPDAVYDNLEYAL   88 (124)
T ss_dssp             ES---HHHHHHHHHHHH
T ss_pred             cC--ChHHhHHHHHHHH
Confidence            98  4555656666654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=94.29  E-value=0.088  Score=37.55  Aligned_cols=95  Identities=17%  Similarity=0.146  Sum_probs=50.9

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcE-EEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|+.+++.|.+. ++++.++..++....+...        ...+.+. ....++ +.+.+.  ..  ++|+||-
T Consensus         5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~   71 (122)
T smart00859        5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVS--------EAGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL   71 (122)
T ss_pred             ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHH--------HHCccccccccccc-ccCChh--hc--CCCEEEE
Confidence            488999999999999985 7888888443322111111        0011121 111122 222222  12  7899988


Q ss_pred             ccCCCccch--HHHHHhCCCCCcEEEEeeeeE
Q 023078           79 INGREADEV--EPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        79 ~a~~~~~~~--~~l~~a~~~~~~~i~~Ss~~~  108 (287)
                      +.+......  ..+...++..+.+|.+||...
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~  103 (122)
T smart00859       72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFR  103 (122)
T ss_pred             cCCcHHHHHHHHHHHhhhcCCCEEEECCcccc
Confidence            776542221  123333445567777777643

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=94.28  E-value=0.086  Score=38.43  Aligned_cols=67  Identities=16%  Similarity=0.160  Sum_probs=42.9

Q ss_pred             cccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|..|+.++..|.+.|.+ |+++.|+.++..+...     .+  ....+.++  ++   +++.+.+.  ++|+||++.+
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~-----~~--~~~~~~~~--~~---~~~~~~~~--~~DivI~aT~   84 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEALAE-----EF--GGVNIEAI--PL---EDLEEALQ--EADIVINATP   84 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHH-----HH--TGCSEEEE--EG---GGHCHHHH--TESEEEE-SS
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHH-----Hc--Ccccccee--eH---HHHHHHHh--hCCeEEEecC
Confidence            4588999999999999965 9999998776332211     00  01223333  33   33445666  8999999876


Q ss_pred             CC
Q 023078           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.27  E-value=0.27  Score=41.41  Aligned_cols=82  Identities=13%  Similarity=0.218  Sum_probs=53.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|..+..                .++..+    ...+++.++++  ++|+|+.+...
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence            679999999999999999999999865431                111111    12456777887  88999977665


Q ss_pred             CccchHH-----HHHhCCCCCcEEEEeeee
Q 023078           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~~~~-----l~~a~~~~~~~i~~Ss~~  107 (287)
                      +.. +..     .++.++...-||.++-..
T Consensus       201 t~~-T~~li~~~~l~~mk~ga~lIN~aRG~  229 (312)
T PRK15469        201 TPE-TVGIINQQLLEQLPDGAYLLNLARGV  229 (312)
T ss_pred             CHH-HHHHhHHHHHhcCCCCcEEEECCCcc
Confidence            533 333     344455444566655443

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.25  E-value=0.095  Score=48.42  Aligned_cols=80  Identities=13%  Similarity=0.231  Sum_probs=58.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-+|+.+++.|.++|+++++++++++.... ..          ..+...+.||.++++.++++-- .++|+++-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vv~~~~d  474 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAVNL-MR----------KYGYKVYYGDATQLELLRAAGA-EKAEAIVITCNE  474 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHHHH-HH----------hCCCeEEEeeCCCHHHHHhcCC-ccCCEEEEEeCC
Confidence            67899999999999999999999998776322 21          2578899999999998877532 378988866554


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                      . .....++..++
T Consensus       475 ~-~~n~~i~~~~r  486 (601)
T PRK03659        475 P-EDTMKIVELCQ  486 (601)
T ss_pred             H-HHHHHHHHHHH
Confidence            3 33344555554

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=94.25  E-value=0.11  Score=50.59  Aligned_cols=69  Identities=14%  Similarity=-0.002  Sum_probs=51.0

Q ss_pred             cccchHHHHHHHHHHCC-Ce-------------EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhh
Q 023078            3 GTRFIGVFLSRLLVKEG-HQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~-------------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   68 (287)
                      |+|++|+..++.|.+.+ ++             |.+.+++...... +        .+..++++.+..|..|.+++.+++
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~-l--------a~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE-T--------VEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH-H--------HHhcCCCceEEeecCCHHHHHHhh
Confidence            46999999999998753 33             6666666544221 1        111246788999999999999998


Q ss_pred             ccCCccEEEEccCC
Q 023078           69 SAKGFDVVYDINGR   82 (287)
Q Consensus        69 ~~~~~d~vi~~a~~   82 (287)
                      +  ++|+||.+...
T Consensus       647 ~--~~DaVIsalP~  658 (1042)
T PLN02819        647 S--QVDVVISLLPA  658 (1042)
T ss_pred             c--CCCEEEECCCc
Confidence            8  79999998765

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.16  E-value=0.18  Score=42.42  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=25.5

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~   29 (287)
                      +||||++|..++..|+..|+  +|++++|.+
T Consensus         6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           6 IGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            58999999999999999885  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=94.14  E-value=0.11  Score=44.49  Aligned_cols=94  Identities=19%  Similarity=0.140  Sum_probs=52.2

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEE-EecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +||||++|+.+++.|.+. +.+++++.++.+. .+.+..        ...++..+ ..++.+.+..  .+.  ++|+|+.
T Consensus         8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~--------~~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~   74 (343)
T PRK00436          8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSD--------VHPHLRGLVDLVLEPLDPE--ILA--GADVVFL   74 (343)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHH--------hCcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence            599999999999999987 5788887774322 111110        01111111 1123333322  334  7999988


Q ss_pred             ccCCCccchHHHHHhC-CCCCcEEEEeeeeEe
Q 023078           79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~-~~~~~~i~~Ss~~~y  109 (287)
                      +....  ....++..+ +.-+++|=.|+..-+
T Consensus        75 alP~~--~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPHG--VSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             CCCcH--HHHHHHHHHHhCCCEEEECCcccCC
Confidence            66543  233344433 344577777766544

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.14  E-value=0.098  Score=40.16  Aligned_cols=82  Identities=17%  Similarity=0.119  Sum_probs=50.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|..-|.+|++.+|.........           ..++        ...++.++++  .+|+|+.+...
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-----------~~~~--------~~~~l~ell~--~aDiv~~~~pl  101 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-----------EFGV--------EYVSLDELLA--QADIVSLHLPL  101 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-----------HTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhhhcc-----------cccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence            6799999999999999999999999987632000           0111        1224555666  78888876654


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +..    -....++.++.-..||.++-
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccceeeeeeeeeccccceEEEeccc
Confidence            332    13445666664445665554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.09  E-value=0.3  Score=41.24  Aligned_cols=91  Identities=18%  Similarity=0.263  Sum_probs=57.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|..+++.+...|.+|+++++++++.. .+        .+  .++..+ .|..+   .+.+.+... .++|+|+
T Consensus       150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~-~l--------~~--~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl  216 (329)
T cd08294         150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA-WL--------KE--LGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF  216 (329)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HH--cCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence            489999999999998889999999988766522 11        11  122111 12222   233333332 4799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++.+.  ......++.++...+++.++..
T Consensus       217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         217 DNVGG--EFSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             ECCCH--HHHHHHHHhhccCCEEEEEcch
Confidence            98874  3445566667655678877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.98  E-value=0.15  Score=43.74  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=25.5

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (287)
                      +||||++|+.|++.|.+.. .+++++.++.++
T Consensus         9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          9 LGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            5999999999999999875 488888666544

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.93  E-value=0.68  Score=36.28  Aligned_cols=89  Identities=13%  Similarity=0.144  Sum_probs=52.3

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecC---CccccccCCCC----------CchhhhhhcCC--cEEEEecCCChHHHHh
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQLPGE----------SDQEFAEFSSK--ILHLKGDRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~---~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~d~~~~~~~~~   66 (287)
                      |.|-+|+.++..|.+.|. ++++++++   .+....+.-..          ....+....+.  ++.+..+++ .+.+.+
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~-~~~~~~  106 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT-EENIDK  106 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC-HhHHHH
Confidence            468899999999999997 79999887   44333221100          01122222233  344445553 466777


Q ss_pred             hhccCCccEEEEccCCCccchHHHHHhCC
Q 023078           67 SLSAKGFDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~a~~   95 (287)
                      +++  ++|+||.+ ..+...-..+.+.+.
T Consensus       107 ~~~--~~DlVi~a-~Dn~~~k~~l~~~~~  132 (200)
T TIGR02354       107 FFK--DADIVCEA-FDNAEAKAMLVNAVL  132 (200)
T ss_pred             Hhc--CCCEEEEC-CCCHHHHHHHHHHHH
Confidence            787  89999988 333332233444443

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=93.92  E-value=0.21  Score=39.49  Aligned_cols=104  Identities=13%  Similarity=0.157  Sum_probs=60.5

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCcc---ccccCC----------CCCchhhhhhcCCcE--EEEecCCChHHHHh
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLP----------GESDQEFAEFSSKIL--HLKGDRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~---~~~~~~----------~~~~~~~~~~~~~~~--~~~~d~~~~~~~~~   66 (287)
                      |.|-+|+.+++.|.+.|. ++++++.+.-.   ...+.-          ......+.+..+.++  .+...++ .+.+.+
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~~  113 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIEE  113 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHHH
Confidence            578999999999999985 68888886322   111100          000122223334443  3444443 345667


Q ss_pred             hhccCCccEEEEccCCCccchHHHHHhCC-C-CCcEEEEeeeeEee
Q 023078           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~-~~~~i~~Ss~~~y~  110 (287)
                      .++  ++|+||.+.. +...-..+.+.|. . ...+|+.+..+-|+
T Consensus       114 ~~~--~~DvVI~a~D-~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~  156 (212)
T PRK08644        114 LFK--DCDIVVEAFD-NAETKAMLVETVLEHPGKKLVAASGMAGYG  156 (212)
T ss_pred             HHc--CCCEEEECCC-CHHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence            777  8999998843 3333344556665 4 67888776554443

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=93.91  E-value=0.32  Score=42.24  Aligned_cols=65  Identities=15%  Similarity=0.043  Sum_probs=50.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|.+|..+++.+.+.|++|++++.++......+            + -+.+..|..|.+.+.++++..++|.|+...
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~------------a-d~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV------------A-HRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh------------C-ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            4799999999999999999999999865532221            1 134567888999999988877899998643

This enzyme is an alternative to PurN (TIGR00639)

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=93.79  E-value=0.11  Score=38.21  Aligned_cols=73  Identities=21%  Similarity=0.242  Sum_probs=43.8

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|.+|++++..|...+  .+++++++++........   +................ .+.    +.++  ++|+||-
T Consensus         6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~---Dl~~~~~~~~~~~~i~~-~~~----~~~~--~aDivvi   75 (141)
T PF00056_consen    6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEAL---DLSHASAPLPSPVRITS-GDY----EALK--DADIVVI   75 (141)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH---HHHHHHHGSTEEEEEEE-SSG----GGGT--TESEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeeh---hhhhhhhhccccccccc-ccc----cccc--cccEEEE
Confidence            5899999999999999885  689999998654221111   11111111212111111 222    3455  8999999


Q ss_pred             ccCCC
Q 023078           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        76 tag~~   80 (141)
T PF00056_consen   76 TAGVP   80 (141)
T ss_dssp             TTSTS
T ss_pred             ecccc
Confidence            98874

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=93.77  E-value=0.23  Score=44.12  Aligned_cols=64  Identities=13%  Similarity=0.049  Sum_probs=44.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc-cCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~d~vi~~a~   81 (287)
                      .||..|.+|++.+..+|.+|++++-...- .  .           ..+++++..+  +.+++.++++ ....|++|++|+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~--~-----------p~~v~~i~V~--ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL-A--D-----------PQGVKVIHVE--SARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCC-C--C-----------CCCceEEEec--CHHHHHHHHHhhCCCCEEEEecc
Confidence            68999999999999999999999854321 0  1           3466666544  3444444443 235799999998


Q ss_pred             C
Q 023078           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      +
T Consensus       344 V  344 (475)
T PRK13982        344 V  344 (475)
T ss_pred             c
Confidence            7

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=93.71  E-value=0.13  Score=45.30  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=27.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|++|..++..|.+.|++|+++++++.+.
T Consensus         7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v   36 (411)
T TIGR03026         7 GLGYVGLPLAALLADLGHEVTGVDIDQEKV   36 (411)
T ss_pred             CCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence            689999999999999999999999987763

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.66  E-value=0.18  Score=36.21  Aligned_cols=86  Identities=20%  Similarity=0.272  Sum_probs=54.8

Q ss_pred             hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEEEccCCC
Q 023078            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      +|...++.+...|.+|+++++++.+.. .+        .+  -+...+ .|..+   .+.+.++....++|+||.+.|. 
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~~-~~--------~~--~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~-   68 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKLE-LA--------KE--LGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS-   68 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHHH-HH--------HH--TTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHHH-HH--------Hh--hccccc-ccccccccccccccccccccceEEEEecCc-
Confidence            688888888888999999999876621 11        11  233222 23322   3566666654579999999984 


Q ss_pred             ccchHHHHHhCCCCCcEEEEee
Q 023078           84 ADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        84 ~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      .......++.++...+++.++.
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~   90 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGV   90 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESS
T ss_pred             HHHHHHHHHHhccCCEEEEEEc
Confidence            2445556666765556666554

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.65  E-value=0.41  Score=40.68  Aligned_cols=92  Identities=20%  Similarity=0.199  Sum_probs=57.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|+..++.+...|+.+++.+.++.+.. .+.          ..+... -.|..+   .+.+.++....++|+|+
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~----------~lGAd~-vi~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK----------ELGADH-VINYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH----------hcCCCE-EEcCCcccHHHHHHHHcCCCCceEEE
Confidence            599999999999999999977777666655522 211          112211 112322   34555556555799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +..|-.  .....+++++...+++.++..
T Consensus       217 D~vG~~--~~~~~l~~l~~~G~lv~ig~~  243 (326)
T COG0604         217 DTVGGD--TFAASLAALAPGGRLVSIGAL  243 (326)
T ss_pred             ECCCHH--HHHHHHHHhccCCEEEEEecC
Confidence            977632  233456666644788776654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=93.59  E-value=0.55  Score=38.10  Aligned_cols=102  Identities=16%  Similarity=0.193  Sum_probs=59.4

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCC--------------CCchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-+.              .....+.+..+.+++  +...+ +.+.+.
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~~  117 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDELA  117 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            458999999999999984 777777654331111000              001233344444443  33444 345566


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeE
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGV  108 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~  108 (287)
                      +.++  ++|+||.+.. +...-..+-++|+ ..+.+|+.+..+.
T Consensus       118 ~~~~--~~DiVi~~~D-~~~~r~~ln~~~~~~~ip~v~~~~~g~  158 (245)
T PRK05690        118 ALIA--GHDLVLDCTD-NVATRNQLNRACFAAKKPLVSGAAIRM  158 (245)
T ss_pred             HHHh--cCCEEEecCC-CHHHHHHHHHHHHHhCCEEEEeeeccC
Confidence            7787  8999998865 3333333555566 5567887655443

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=93.58  E-value=0.29  Score=40.39  Aligned_cols=93  Identities=22%  Similarity=0.239  Sum_probs=52.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCC---CCchhhhhhcCCcEEEEecCCChHHHHhhhccC--------
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG---ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------   71 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--------   71 (287)
                      |.|-.|..++.+|+++||+|++.+|++++..+.+..   .......+.....+++-.=+.|.+.+.+++...        
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~   86 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK   86 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence            578899999999999999999999998873222211   000000111223344444444555555544310        


Q ss_pred             CccEEEEccCCCccchHHHHHhCC
Q 023078           72 GFDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        72 ~~d~vi~~a~~~~~~~~~l~~a~~   95 (287)
                      .=.++|.+....+..++.+.+.++
T Consensus        87 ~G~i~IDmSTisp~~a~~~a~~~~  110 (286)
T COG2084          87 PGAIVIDMSTISPETARELAAALA  110 (286)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHH
Confidence            123455555555555666655554

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=93.54  E-value=0.18  Score=42.34  Aligned_cols=93  Identities=12%  Similarity=0.155  Sum_probs=48.9

Q ss_pred             CCcccchHHHHHHHHHHCCC--e-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--Q-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      .||||.+|+.+++.|.++..  + +.++... ++.-+.+              .++......-++...+.....++|+++
T Consensus         7 vGATG~VG~~~~~~L~e~~f~~~~~~~~AS~-rSaG~~~--------------~~f~~~~~~v~~~~~~~~~~~~~Divf   71 (334)
T COG0136           7 LGATGAVGQVLLELLEERHFPFEELVLLASA-RSAGKKY--------------IEFGGKSIGVPEDAADEFVFSDVDIVF   71 (334)
T ss_pred             EeccchHHHHHHHHHHhcCCCcceEEEEecc-cccCCcc--------------ccccCccccCccccccccccccCCEEE
Confidence            49999999999999999753  3 3333332 2222221              222221122222222222222899999


Q ss_pred             EccCCCccchHHHHHhCC--CCCcEEEEeeeeEeecCC
Q 023078           78 DINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~  113 (287)
                      .++|-...  +.+...+.  |   .+.++..+.|....
T Consensus        72 ~~ag~~~s--~~~~p~~~~~G---~~VIdnsSa~Rm~~  104 (334)
T COG0136          72 FAAGGSVS--KEVEPKAAEAG---CVVIDNSSAFRMDP  104 (334)
T ss_pred             EeCchHHH--HHHHHHHHHcC---CEEEeCCcccccCC
Confidence            99875543  34444433  4   45555555555443

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.54  E-value=0.64  Score=39.29  Aligned_cols=92  Identities=20%  Similarity=0.229  Sum_probs=56.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|...++.+...|.+|+++++++.+.. .+        .+  -+. .++..+-.+ .+.+.+.....++|++++
T Consensus       150 ~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~-~~--------~~--~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         150 TAAASALGRMLVRLCKADGIKVINIVRRKEQVD-LL--------KK--IGAEYVLNSSDPDFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             ccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH--------HH--cCCcEEEECCCccHHHHHHHHhCCCCCcEEEE
Confidence            389999999999888788999999888765521 11        11  122 222211111 234444444447999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.|..  .....++.++...+++.++.
T Consensus       219 ~~g~~--~~~~~~~~l~~~G~~v~~g~  243 (324)
T cd08291         219 AVGGG--LTGQILLAMPYGSTLYVYGY  243 (324)
T ss_pred             CCCcH--HHHHHHHhhCCCCEEEEEEe
Confidence            88743  33445666665567777664

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=93.46  E-value=0.099  Score=44.61  Aligned_cols=88  Identities=14%  Similarity=0.070  Sum_probs=47.6

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|..|++.|.+++|   ++..+....+. .+.+..          .+..+...++ +.+    .+.  ++|+||
T Consensus        13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~~----------~~~~~~v~~~-~~~----~~~--~~D~vf   74 (344)
T PLN02383         13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVTF----------EGRDYTVEEL-TED----SFD--GVDIAL   74 (344)
T ss_pred             EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeeee----------cCceeEEEeC-CHH----HHc--CCCEEE
Confidence            49999999999999998776   44444333221 111110          1222222233 222    234  799999


Q ss_pred             EccCCCccchHHHHHhC-CCCCcEEEEeeeeE
Q 023078           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~-~~~~~~i~~Ss~~~  108 (287)
                      .+++..  ....+...+ +.-.++|=.|+..-
T Consensus        75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR  104 (344)
T PLN02383         75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFR  104 (344)
T ss_pred             ECCCcH--HHHHHHHHHHhCCCEEEECCchhh
Confidence            877654  233333333 33345666666553

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.42  E-value=0.07  Score=45.02  Aligned_cols=29  Identities=17%  Similarity=0.219  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|.+|+.++..++..|++|++.++++..
T Consensus        14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~   42 (321)
T PRK07066         14 GSGVIGSGWVARALAHGLDVVAWDPAPGA   42 (321)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            57999999999999999999999998764

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=93.38  E-value=0.19  Score=42.04  Aligned_cols=83  Identities=18%  Similarity=0.241  Sum_probs=51.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.++..|.+.|.+|++.+|++..... ..          ..+.+++     ..+.+.+.+.  ++|+||++...
T Consensus       159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~----------~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~  220 (296)
T PRK08306        159 GFGRTGMTLARTLKALGANVTVGARKSAHLAR-IT----------EMGLSPF-----HLSELAEEVG--KIDIIFNTIPA  220 (296)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HcCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence            35889999999999999999999998654211 10          1233322     2345666777  89999998653


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .. -....++.++....+|-++
T Consensus       221 ~~-i~~~~l~~~~~g~vIIDla  241 (296)
T PRK08306        221 LV-LTKEVLSKMPPEALIIDLA  241 (296)
T ss_pred             hh-hhHHHHHcCCCCcEEEEEc
Confidence            21 2344455555333444344

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=93.35  E-value=0.58  Score=39.80  Aligned_cols=91  Identities=14%  Similarity=0.181  Sum_probs=56.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC----hHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~d~v   76 (287)
                      +||+|-+|..+++.+...|.+|+++++++.+... +.        + ..++..+ .|..+    .+.+.+... .++|+|
T Consensus       158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~-~~--------~-~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v  225 (338)
T cd08295         158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDL-LK--------N-KLGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY  225 (338)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H-hcCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence            4899999999999888889999999888665221 10        0 0122111 12211    123333332 479999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++.|.  ......++.++...+++.++.
T Consensus       226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         226 FDNVGG--KMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence            998873  345566777775667876664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.30  E-value=0.25  Score=35.54  Aligned_cols=25  Identities=32%  Similarity=0.496  Sum_probs=22.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEec
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTR   27 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r   27 (287)
                      |+|.+|.+|++.|.+.||+|..+..
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~s   41 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYS   41 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESS
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEe
Confidence            4699999999999999999988754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=93.26  E-value=0.31  Score=42.23  Aligned_cols=61  Identities=18%  Similarity=0.152  Sum_probs=47.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.++..+.+.|++|++++.++......+.             -..+.+|+.|.+.+.++.+  .+|+|..
T Consensus         9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a-------------d~~~~~~~~D~~~l~~~a~--~~dvit~   69 (372)
T PRK06019          9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA-------------DEVIVADYDDVAALRELAE--QCDVITY   69 (372)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC-------------ceEEecCCCCHHHHHHHHh--cCCEEEe
Confidence            45899999999999999999999987655322221             2355678899999999988  8898753

>PRK08328 hypothetical protein; Provisional

Probab=93.24  E-value=1.1  Score=35.90  Aligned_cols=104  Identities=17%  Similarity=0.213  Sum_probs=63.0

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------C-------chhhhhhcCCc--EEEEecCCChHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------S-------DQEFAEFSSKI--LHLKGDRKDYDFV   64 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------~-------~~~~~~~~~~~--~~~~~d~~~~~~~   64 (287)
                      |.|-+|+++++.|...|. ++++++.+.-.....-+..        .       ...+.+..+.+  +.+...+ +++.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~  112 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI  112 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence            678999999999999984 7888876543311111100        0       01122333444  3334444 44556


Q ss_pred             HhhhccCCccEEEEccCCCccchHHHH-HhCC-CCCcEEEEeeeeEeec
Q 023078           65 KSSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~~~~~~l~-~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      .++++  ++|+||.+.... . ++.++ ++|+ ...++|+.++.+.||.
T Consensus       113 ~~~l~--~~D~Vid~~d~~-~-~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        113 DEVLK--GVDVIVDCLDNF-E-TRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             HHHHh--cCCEEEECCCCH-H-HHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            77787  899999876652 2 33333 4555 6678998888777764

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=93.14  E-value=0.078  Score=39.50  Aligned_cols=67  Identities=12%  Similarity=0.063  Sum_probs=41.6

Q ss_pred             CcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+ |.+|+.+++.|.+.| ++|++.+|+.++..+...        .  .+...+..+..+.+   +.++  ++|+||.+.
T Consensus        26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~--------~--~~~~~~~~~~~~~~---~~~~--~~Dvvi~~~   89 (155)
T cd01065          26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE--------R--FGELGIAIAYLDLE---ELLA--EADLIINTT   89 (155)
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH--------H--Hhhcccceeecchh---hccc--cCCEEEeCc
Confidence            54 899999999999985 889999998665321110        0  01110112233332   3355  899999988


Q ss_pred             CCCc
Q 023078           81 GREA   84 (287)
Q Consensus        81 ~~~~   84 (287)
                      ....
T Consensus        90 ~~~~   93 (155)
T cd01065          90 PVGM   93 (155)
T ss_pred             CCCC
Confidence            7654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.13  E-value=0.7  Score=38.84  Aligned_cols=92  Identities=18%  Similarity=0.173  Sum_probs=58.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcE-EEEecCC-ChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~-~~~~~~~~~~~~~~d~vi~   78 (287)
                      .|++|-+|..+++.+...|.+|++++++.++... +        .+  .++. ++..+-. -.+.+.+.....++|+|++
T Consensus       146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~-~--------~~--~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d  214 (324)
T cd08292         146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE-L--------RA--LGIGPVVSTEQPGWQDKVREAAGGAPISVALD  214 (324)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH-H--------Hh--cCCCEEEcCCCchHHHHHHHHhCCCCCcEEEE
Confidence            4889999999999999999999999887665211 1        11  1221 2211111 1234555555457999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.+..  .....++.++...+|+.++.
T Consensus       215 ~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         215 SVGGK--LAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             CCCCh--hHHHHHHhhcCCcEEEEEec
Confidence            88853  34556666666667887754

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.13  E-value=0.19  Score=42.16  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..++..|.+.|++|.+.+|++++
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~   35 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDA   35 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            47899999999999999999999998766

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=93.13  E-value=0.28  Score=41.43  Aligned_cols=88  Identities=23%  Similarity=0.279  Sum_probs=54.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|.+|..+++.+...|.+|+++++++.... .+.        .  .+. .++  +..+ .+.+.+. .  ++|.+++
T Consensus       169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~~~~~~~--~~~~~~~~~~~~-~--~~d~v~~  232 (332)
T cd08259         169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK-ILK--------E--LGADYVI--DGSKFSEDVKKL-G--GADVVIE  232 (332)
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHH--------H--cCCcEEE--ecHHHHHHHHhc-c--CCCEEEE
Confidence            489999999999999999999999998765421 111        0  111 112  1111 1222222 2  7899999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +++...  ....++.+....+++.++..
T Consensus       233 ~~g~~~--~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         233 LVGSPT--IEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             CCChHH--HHHHHHHhhcCCEEEEEcCC
Confidence            987432  44556666655678877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=93.08  E-value=0.38  Score=40.70  Aligned_cols=85  Identities=19%  Similarity=0.201  Sum_probs=56.7

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      .|-+|..-++.+...|.+|++++|++++......           -+...+. +.+|++....+-+  .+|+||.+++  
T Consensus       175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-----------lGAd~~i-~~~~~~~~~~~~~--~~d~ii~tv~--  238 (339)
T COG1064         175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-----------LGADHVI-NSSDSDALEAVKE--IADAIIDTVG--  238 (339)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-----------hCCcEEE-EcCCchhhHHhHh--hCcEEEECCC--
Confidence            3478888888887789999999999987421111           1222222 2225555555444  4899999999  


Q ss_pred             ccchHHHHHhCCCCCcEEEEe
Q 023078           84 ADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        84 ~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .......+++++.-.+++.++
T Consensus       239 ~~~~~~~l~~l~~~G~~v~vG  259 (339)
T COG1064         239 PATLEPSLKALRRGGTLVLVG  259 (339)
T ss_pred             hhhHHHHHHHHhcCCEEEEEC
Confidence            566677788888656777666

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.02  E-value=0.099  Score=40.75  Aligned_cols=31  Identities=32%  Similarity=0.344  Sum_probs=27.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +||+|.+|..|+..|.+.||+|+.-+|+.++
T Consensus         6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             EeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            4899999999999999999999998776655

>cd08293 PTGR2 Prostaglandin reductase

Probab=92.99  E-value=0.68  Score=39.44  Aligned_cols=93  Identities=13%  Similarity=0.171  Sum_probs=57.5

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcE-EEEecCCC-hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~-~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|..+++.+...|. +|+++++++++.....         + ..++. ++..+-.+ .+.+.++.. .++|+|+
T Consensus       161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~---------~-~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vi  229 (345)
T cd08293         161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK---------S-ELGFDAAINYKTDNVAERLRELCP-EGVDVYF  229 (345)
T ss_pred             ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH---------H-hcCCcEEEECCCCCHHHHHHHHCC-CCceEEE
Confidence            48999999999988888898 7999988766522110         0 01221 22111111 233444332 4799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++.+..  .....++.++...+++.++..
T Consensus       230 d~~g~~--~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         230 DNVGGE--ISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             ECCCcH--HHHHHHHHhccCCEEEEEeee
Confidence            988753  245667777766788877654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=92.94  E-value=0.099  Score=41.62  Aligned_cols=31  Identities=29%  Similarity=0.343  Sum_probs=28.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +||+|.+|+.++..|.+.|++|.+.+|++++
T Consensus         6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            3789999999999999999999999998765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=92.92  E-value=0.73  Score=37.38  Aligned_cols=76  Identities=18%  Similarity=0.087  Sum_probs=58.5

Q ss_pred             hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC-Ccc
Q 023078            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR-EAD   85 (287)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~-~~~   85 (287)
                      =|+.|++.|.+.|++|++.+-.+...   ..          ..++.++.|-+.+.+.+.+.+++.++++||+..=+ ...
T Consensus        13 egr~la~~L~~~g~~v~~Svat~~g~---~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~   79 (248)
T PRK08057         13 EARALARALAAAGVDIVLSLAGRTGG---PA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQ   79 (248)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccCCCC---cc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence            48899999999999988877665432   11          24677888998899999999999999999986543 334


Q ss_pred             chHHHHHhCC
Q 023078           86 EVEPILDALP   95 (287)
Q Consensus        86 ~~~~l~~a~~   95 (287)
                      -.+++.++|+
T Consensus        80 is~~a~~ac~   89 (248)
T PRK08057         80 ISANAAAACR   89 (248)
T ss_pred             HHHHHHHHHH
Confidence            4677788877

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=92.83  E-value=0.6  Score=39.39  Aligned_cols=92  Identities=18%  Similarity=0.169  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH---HHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|+++++++.+.. .+.        .  .+... ..|..+.+   .+.......++|.++
T Consensus       173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~-~~~--------~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE-RAK--------E--LGADY-VIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H--cCCCe-EEecCChHHHHHHHHHhCCCCCcEEE
Confidence            488899999999999999999999988765421 111        0  11111 12333332   333333334789999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++++.  ......++.++...+++.+++.
T Consensus       241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~  267 (342)
T cd08266         241 EHVGA--ATWEKSLKSLARGGRLVTCGAT  267 (342)
T ss_pred             ECCcH--HHHHHHHHHhhcCCEEEEEecC
Confidence            99874  2344556666644678887764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.78  E-value=0.63  Score=39.20  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=57.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|..+++.+...|.+|+++++++.+.... .        +  .++..+ .|..+  .+.+... ...++|.|++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~--------~--~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld  219 (326)
T cd08289         153 TGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-K--------K--LGAKEV-IPREELQEESIKPL-EKQRWAGAVD  219 (326)
T ss_pred             EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-H--------H--cCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence            47889999999999999999999999887652211 1        1  122111 11111  2333333 2347999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +.+.  ......++.++...+++.++..
T Consensus       220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         220 PVGG--KTLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence            8874  3455566677766788877653

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=92.72  E-value=1.3  Score=38.18  Aligned_cols=104  Identities=13%  Similarity=0.058  Sum_probs=62.8

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-+..              ....+.+..+.+++  +...++ .+...
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~~  113 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNAL  113 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHHH
Confidence            568999999999999984 7777777653211111100              12233344455543  334443 45556


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.++  ++|+||.+.... ..-..+.++|. ....||+.+..+.+|
T Consensus       114 ~~~~--~~DvVvd~~d~~-~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        114 DELR--DADVILDGSDNF-DTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             HHHh--CCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            6777  899999887542 22223445566 567888887766555

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.61  E-value=0.063  Score=44.68  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|.+|..++..|.+.|++|++.++++..
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293         10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            57999999999999999999999998764

>TIGR00518 alaDH alanine dehydrogenase

Probab=92.55  E-value=0.65  Score=40.19  Aligned_cols=90  Identities=9%  Similarity=0.044  Sum_probs=58.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|-+|...++.|...|.+|++++|+..+... +.        ... + ..+..+..+.+.+.+.+.  ++|+||.++..
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~-l~--------~~~-g-~~v~~~~~~~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQ-LD--------AEF-G-GRIHTRYSNAYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HH--------Hhc-C-ceeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence            45899999999999999999999998654211 10        000 1 112334556777888887  89999998743


Q ss_pred             Ccc-----chHHHHHhCCCCCcEEEEee
Q 023078           83 EAD-----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~-----~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ...     -+...++.++....+|-++.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            211     23556666664445665653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=92.41  E-value=0.89  Score=38.20  Aligned_cols=91  Identities=22%  Similarity=0.139  Sum_probs=58.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|+++++++++.. .+.        .  .++..+ .+..+   .+.+.......++|.|+
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA-LVR--------A--LGADVA-VDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH--------H--cCCCEE-EecCCccHHHHHHHHcCCCCceEEE
Confidence            488999999999999999999999988766521 111        1  122111 12222   23344444434799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ++.+..  .....++.++...+++.++.
T Consensus       217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~  242 (324)
T cd08244         217 DGVGGA--IGRAALALLAPGGRFLTYGW  242 (324)
T ss_pred             ECCChH--hHHHHHHHhccCcEEEEEec
Confidence            998743  24566777776668887764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=92.30  E-value=1  Score=37.62  Aligned_cols=92  Identities=15%  Similarity=0.171  Sum_probs=56.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|+++++++.+... +.        .  .++..+ .|..+.   ..+.+.....++|.++
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAEL-VR--------Q--AGADAV-FNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCCEE-EeCCCcCHHHHHHHHcCCCceEEEE
Confidence            4889999999999999999999999987654211 11        0  122111 223322   3344444445799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++++..  ......+.++...+++.+++.
T Consensus       219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         219 EVLANV--NLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence            987643  233344555555678877654

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=92.28  E-value=0.23  Score=41.99  Aligned_cols=29  Identities=17%  Similarity=0.095  Sum_probs=24.8

Q ss_pred             CCcccchHHHHHHHHHHCC--C-----eEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~-----~V~~l~r~~   29 (287)
                      +||+|.+|++++..|+..+  .     ++++++..+
T Consensus         9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            5889999999999999876  3     799998864

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=92.22  E-value=0.17  Score=41.55  Aligned_cols=73  Identities=14%  Similarity=0.095  Sum_probs=44.1

Q ss_pred             CCcccchHHHHHHHHHHCC----CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..++..|+..+    .+|+++++++.+.....     .++.......  ....+.-.++..+.++  ++|+|
T Consensus         4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~-----~dl~~~~~~~--~~~~i~~~~d~~~~~~--~aDiV   74 (263)
T cd00650           4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVA-----MDLQDAVEPL--ADIKVSITDDPYEAFK--DADVV   74 (263)
T ss_pred             ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHH-----HHHHHhhhhc--cCcEEEECCchHHHhC--CCCEE
Confidence            5888999999999999888    79999998775422111     1111110110  0111111223345566  89999


Q ss_pred             EEccCC
Q 023078           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      |..++.
T Consensus        75 v~t~~~   80 (263)
T cd00650          75 IITAGV   80 (263)
T ss_pred             EECCCC
Confidence            998765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=92.20  E-value=0.36  Score=40.57  Aligned_cols=71  Identities=18%  Similarity=0.254  Sum_probs=42.2

Q ss_pred             cccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|.+|+.++..|+..|  ++|+++++++......... .............+..   .+.+    .+.  ++|+||.++
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~d-L~~~~~~~~~~~~i~~---~~~~----~l~--~aDIVIita   76 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALD-LEDALAFLPSPVKIKA---GDYS----DCK--DADIVVITA   76 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhh-HHHHhhccCCCeEEEc---CCHH----HhC--CCCEEEEcc
Confidence            35999999999999988  6899999987663222110 0000000011222221   2222    244  899999999


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      |..
T Consensus        77 g~~   79 (306)
T cd05291          77 GAP   79 (306)
T ss_pred             CCC
Confidence            873

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06436 glycerate dehydrogenase; Provisional

Probab=92.18  E-value=0.55  Score=39.37  Aligned_cols=81  Identities=19%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|+...                 .++...      ..++.++++  ++|+|+.+...
T Consensus       129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~  183 (303)
T PRK06436        129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL  183 (303)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence            57999999999887789999999986332                 111100      123566676  78999877665


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeeeeE
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~~  108 (287)
                      +...    ....++.++....||.+|...+
T Consensus       184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~  213 (303)
T PRK06436        184 TDETRGMINSKMLSLFRKGLAIINVARADV  213 (303)
T ss_pred             CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            4321    2345566665556777766544

>PRK08655 prephenate dehydrogenase; Provisional

Probab=92.18  E-value=0.18  Score=44.61  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +||+|.+|+.++..|.+.|++|++++|++..
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            4789999999999999999999999998654

>PRK08223 hypothetical protein; Validated

Probab=92.15  E-value=0.92  Score=37.55  Aligned_cols=105  Identities=13%  Similarity=0.015  Sum_probs=61.5

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccc---cccCC-CC----------CchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP-GE----------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~---~~~~~-~~----------~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+.++..|...|. ++++++.+.-..   ..+.- ..          ....+.+..+.+++  +...++ ++...
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~-~~n~~  112 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG-KENAD  112 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC-ccCHH
Confidence            678899999999999984 777777654321   11110 00          12233344455544  344443 44566


Q ss_pred             hhhccCCccEEEEccCCC-ccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGRE-ADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~-~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      ++++  ++|+|+.+.... ...-..+.++|+ ..+.+|+.+..+..|
T Consensus       113 ~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g~~g  157 (287)
T PRK08223        113 AFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLGMGT  157 (287)
T ss_pred             HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccCCeE
Confidence            7787  899999765432 133334456666 567888876554433

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.05  E-value=1  Score=37.63  Aligned_cols=92  Identities=21%  Similarity=0.206  Sum_probs=57.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|-+|..+++.+...|.+|++++++..+... +.        .  .++ .++..+..+ ...+.......++|.+++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  219 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDA-LL--------A--LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFD  219 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HH--------H--cCCCEEEecCCccHHHHHHHHhCCCCceEEEE
Confidence            4889999999999999999999999887654221 11        0  112 122222111 233444444347999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.+.  ......++.+....+++.++.
T Consensus       220 ~~~~--~~~~~~~~~l~~~g~~v~~g~  244 (328)
T cd08268         220 PVGG--PQFAKLADALAPGGTLVVYGA  244 (328)
T ss_pred             CCch--HhHHHHHHhhccCCEEEEEEe
Confidence            8775  344556666665567776654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=92.02  E-value=0.9  Score=38.21  Aligned_cols=72  Identities=21%  Similarity=0.153  Sum_probs=43.4

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|++++..|..++  .++++++.+  ....     ...++........+....  ..+++.+.++  ++|+||-
T Consensus         6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g-----~alDL~~~~~~~~i~~~~--~~~~~y~~~~--daDivvi   74 (310)
T cd01337           6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPG-----VAADLSHINTPAKVTGYL--GPEELKKALK--GADVVVI   74 (310)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccce-----eehHhHhCCCcceEEEec--CCCchHHhcC--CCCEEEE
Confidence            5889999999999998887  589999887  2111     111121111112222110  1123445666  9999999


Q ss_pred             ccCCC
Q 023078           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        75 taG~~   79 (310)
T cd01337          75 PAGVP   79 (310)
T ss_pred             eCCCC
Confidence            99874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK10537 voltage-gated potassium channel; Provisional

Probab=91.94  E-value=0.77  Score=40.03  Aligned_cols=67  Identities=15%  Similarity=0.168  Sum_probs=49.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-+|+.+++.|.++|+++++++.+...  +..           ..+..++.||.+|++.++++-- .+++.|+-+...
T Consensus       247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~AgI-~~A~aVI~~t~d  312 (393)
T PRK10537        247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAGA-ARARAILALRDN  312 (393)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcCc-ccCCEEEEcCCC
Confidence            56889999999999999999998865221  111           2467899999999988876533 378888865544


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus       313 D  313 (393)
T PRK10537        313 D  313 (393)
T ss_pred             h
Confidence            3

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=91.89  E-value=0.48  Score=40.22  Aligned_cols=61  Identities=15%  Similarity=0.150  Sum_probs=48.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+-++.+..+-|++|++++-+++....+..             -..+..+.+|.+.+.++.+  ++|+|-+
T Consensus         8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT~   68 (375)
T COG0026           8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVITY   68 (375)
T ss_pred             cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEEE
Confidence            68999999999999999999999987766443332             2345677789999999998  8998873

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=91.83  E-value=0.37  Score=44.75  Aligned_cols=80  Identities=16%  Similarity=0.245  Sum_probs=57.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-+|+.+++.|.++|+++++++.+++..... .          ..+..++.||.++++.++++-- .++|.+|-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vvv~~~d  474 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-R----------KFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDD  474 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-H----------hcCCeEEEEeCCCHHHHHhcCC-CcCCEEEEEeCC
Confidence            678999999999999999999999998763222 1          2478899999999998875422 378888866543


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                      . +....++..++
T Consensus       475 ~-~~n~~i~~~ar  486 (621)
T PRK03562        475 P-QTSLQLVELVK  486 (621)
T ss_pred             H-HHHHHHHHHHH
Confidence            3 33344444444

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=91.80  E-value=0.83  Score=38.48  Aligned_cols=72  Identities=21%  Similarity=0.187  Sum_probs=43.4

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|.+|++++..|..++.  ++.++++++.. ..      ..++........+....  +.+++.+.++  ++|+||-
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~------a~DL~~~~~~~~i~~~~--~~~~~~~~~~--daDivvi   73 (312)
T TIGR01772         5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GV------AADLSHIPTAASVKGFS--GEEGLENALK--GADVVVI   73 (312)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EE------EchhhcCCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence            58899999999999988864  89999987621 11      11111111112222101  1122345676  9999999


Q ss_pred             ccCCC
Q 023078           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        74 taG~~   78 (312)
T TIGR01772        74 PAGVP   78 (312)
T ss_pred             eCCCC
Confidence            99874

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=91.74  E-value=0.83  Score=38.39  Aligned_cols=92  Identities=22%  Similarity=0.194  Sum_probs=57.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~d~vi~~   79 (287)
                      .|++|-+|..+++.+...|.+|+++++++++.... .        +  .++..+ .+..+. ..........++|.|+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~--------~--~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-K--------S--LGASEV-LDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H--------h--cCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence            48899999999988888899999999887652211 1        1  122111 122221 123333333478999998


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      .+.  ......++.++...+++.++..
T Consensus       221 ~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (325)
T cd05280         221 VGG--DVLANLLKQTKYGGVVASCGNA  245 (325)
T ss_pred             Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence            764  3455667777766678877653

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=91.71  E-value=0.22  Score=42.29  Aligned_cols=28  Identities=21%  Similarity=0.313  Sum_probs=22.3

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~   28 (287)
                      .||||++|..|++.|.++.   .++..+...
T Consensus        10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~   40 (336)
T PRK08040         10 LGATGAVGEALLELLAERQFPVGELYALASE   40 (336)
T ss_pred             EccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence            4999999999999999853   366666554

>PRK13243 glyoxylate reductase; Reviewed

Probab=91.71  E-value=0.43  Score=40.63  Aligned_cols=84  Identities=18%  Similarity=0.137  Sum_probs=52.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|.+.+|+...... .           ..++.        ..++.++++  ++|+|+.+...
T Consensus       157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-----------~~~~~--------~~~l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEAE-K-----------ELGAE--------YRPLEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCChhhH-H-----------HcCCE--------ecCHHHHHh--hCCEEEEeCCC
Confidence            67999999999999999999999987543110 0           00111        123556676  78999877655


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeeeeE
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~~  108 (287)
                      +...    ....++.++....+|.+|...+
T Consensus       215 t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        215 TKETYHMINEERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             ChHHhhccCHHHHhcCCCCeEEEECcCchh
Confidence            4321    1234555655556777666544

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=91.70  E-value=1.6  Score=38.18  Aligned_cols=105  Identities=12%  Similarity=0.049  Sum_probs=62.8

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccc---cccCC-CC----------CchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQLP-GE----------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~---~~~~~-~~----------~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+.++..|...|. ++++++.+.-..   ..+.- ..          ....+.+..+.+++  +...++ .+...
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~  127 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV  127 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence            678899999999999985 677777643221   11110 00          01223344455444  444443 44566


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEeec
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      ++++  ++|+||.+... ...-..+-++|. ..+.||+.+..+.+|.
T Consensus       128 ~~~~--~~D~Vvd~~d~-~~~r~~ln~~~~~~~~p~v~~~~~g~~G~  171 (392)
T PRK07878        128 ELFS--QYDLILDGTDN-FATRYLVNDAAVLAGKPYVWGSIYRFEGQ  171 (392)
T ss_pred             HHHh--cCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence            7787  89999987643 232233445666 5578998887776663

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=91.65  E-value=1.6  Score=37.87  Aligned_cols=104  Identities=15%  Similarity=0.084  Sum_probs=61.1

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCC--------------CCchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+.++..|...|. ++++++++.-.....-+.              .....+.+..+.+++  +...+ +.+.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence            568899999999999995 788888863221100000              001222333344443  33333 345566


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      ++++  ++|+||++..... .-..+.++|+ ...++|+.+..+.+|
T Consensus       221 ~~~~--~~D~Vv~~~d~~~-~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        221 ALLQ--DVDVVVDGADNFP-TRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             HHHh--CCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7777  8999998776432 2223455566 667888887655444

>PLN02494 adenosylhomocysteinase

Probab=91.58  E-value=0.84  Score=40.48  Aligned_cols=82  Identities=13%  Similarity=0.048  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.+...|.+|+++.+++.+.....           ..++.++        .+.++++  ..|+||.+.+.
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv--------~leEal~--~ADVVI~tTGt  319 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL--------TLEDVVS--EADIFVTTTGN  319 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec--------cHHHHHh--hCCEEEECCCC
Confidence            6789999999999999999999988865421111           1233321        1344565  78999987664


Q ss_pred             CccchHHHHHhCCCCCcEEEEee
Q 023078           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....++.++.
T Consensus       320 ~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        320 KDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ccchHHHHHhcCCCCCEEEEcCC
Confidence            43334556677776667776664

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.58  E-value=0.093  Score=43.63  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=27.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |+|.+|..++..|+..|++|++++++++..
T Consensus        12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819         12 GAGQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            569999999999999999999999998763

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=91.53  E-value=0.69  Score=40.64  Aligned_cols=82  Identities=11%  Similarity=0.017  Sum_probs=50.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.++..|...|.+|++.++++.+.....           ..++.+.     +   +.++++  ++|+||.+.|.
T Consensus       219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence            4689999999999999999999998876521111           1122221     1   345566  89999987764


Q ss_pred             CccchHHHHHhCCCCCcEEEEee
Q 023078           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....++.++.
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~  300 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGH  300 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCC
Confidence            32112234555554445555553

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=91.42  E-value=0.12  Score=38.83  Aligned_cols=85  Identities=21%  Similarity=0.300  Sum_probs=48.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|-.|.+++..|.++|++|.+..|++............   ....+++.+-. .+.-..++.++++  +.|+|+-..  
T Consensus         6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n---~~~~~~~~l~~-~i~~t~dl~~a~~--~ad~Iiiav--   77 (157)
T PF01210_consen    6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQN---PKYLPGIKLPE-NIKATTDLEEALE--DADIIIIAV--   77 (157)
T ss_dssp             SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSE---TTTSTTSBEET-TEEEESSHHHHHT--T-SEEEE-S--
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCC---CCCCCCcccCc-ccccccCHHHHhC--cccEEEecc--
Confidence            689999999999999999999999987542111100000   00011221111 1111234556777  889998543  


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                      .....+.+++.++
T Consensus        78 Ps~~~~~~~~~l~   90 (157)
T PF01210_consen   78 PSQAHREVLEQLA   90 (157)
T ss_dssp             -GGGHHHHHHHHT
T ss_pred             cHHHHHHHHHHHh
Confidence            3455666777765

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=91.40  E-value=2  Score=35.28  Aligned_cols=103  Identities=17%  Similarity=0.194  Sum_probs=59.9

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCccc---cccCCC-----------CCchhhhhhcCCcEEEEe-cCCChHHHHh
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI---AQQLPG-----------ESDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~---~~~~~~-----------~~~~~~~~~~~~~~~~~~-d~~~~~~~~~   66 (287)
                      |.|-+|+++++.|.+.| -++++++.+.-..   ..++..           .+...+.+..+.+++... +..+++...+
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~  116 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE  116 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence            67899999999999999 6888888754321   111110           112233344444444332 2234555566


Q ss_pred             hhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeee
Q 023078           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        67 ~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~  107 (287)
                      ++. .++|+||.+.... ..-..+.+.|+ ...++|..++++
T Consensus       117 ll~-~~~D~VIdaiD~~-~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        117 YMS-AGFSYVIDAIDSV-RPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             Hhc-CCCCEEEEcCCCH-HHHHHHHHHHHHcCCCEEEECCcc
Confidence            653 2699999887643 23344667776 556776555443

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=91.34  E-value=0.56  Score=40.27  Aligned_cols=60  Identities=17%  Similarity=0.096  Sum_probs=45.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |+|.+|+.++..+.+.|++|++++.++......+.             -+.+.++..|.+.+.++.+  .+|+|.
T Consensus         6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a-------------d~~~~~~~~d~~~i~~~a~--~~dvit   65 (352)
T TIGR01161         6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQVA-------------DHVVLAPFFDPAAIRELAE--SCDVIT   65 (352)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC-------------ceeEeCCCCCHHHHHHHHh--hCCEEE
Confidence            45899999999999999999999987655322221             1234678889999998888  788764

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=91.34  E-value=0.38  Score=41.72  Aligned_cols=29  Identities=24%  Similarity=0.558  Sum_probs=26.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~   29 (287)
                      +||.|.+|+.++..|.+.|++|++.+|++
T Consensus       104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199        104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999864

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=91.33  E-value=0.76  Score=38.27  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..+++.|++.|++|++.+|++++
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~   31 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDA   31 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            68999999999999999999999998766

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=91.33  E-value=0.83  Score=40.02  Aligned_cols=81  Identities=10%  Similarity=0.016  Sum_probs=52.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|..++..+...|.+|+++++++.+.....           ..++..+     +.   .++++  ++|+||.+.|.
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-----------~~G~~~~-----~~---~e~v~--~aDVVI~atG~  267 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-----------MEGYEVM-----TM---EEAVK--EGDIFVTTTGN  267 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-----------hcCCEEc-----cH---HHHHc--CCCEEEECCCC
Confidence            6789999999999999999999888765522111           1233322     11   24455  78999998875


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ...-....++.++.-..++.++
T Consensus       268 ~~~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         268 KDIITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             HHHHHHHHHhcCCCCcEEEEeC
Confidence            4322333466677555777666

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.30  E-value=0.13  Score=42.79  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|..++..|++.|++|+++++++...
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            569999999999999999999999987663

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=91.21  E-value=0.16  Score=34.39  Aligned_cols=30  Identities=30%  Similarity=0.495  Sum_probs=26.1

Q ss_pred             cccchHHHHHHHHHHCC---CeEEEE-ecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEG---HQVTLF-TRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g---~~V~~l-~r~~~~~   32 (287)
                      |+|.+|+.|++.|++.|   ++|... +|++++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~   39 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKA   39 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHH
Confidence            78999999999999999   899965 8887763

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=91.17  E-value=1.7  Score=36.60  Aligned_cols=106  Identities=17%  Similarity=0.207  Sum_probs=63.6

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCC--cEEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~--~~~~~~d~~~~~~~~   65 (287)
                      |.|-+|..+++.|...|. ++++++.+.-.....-+..              ....+.+..+.  ++.+..++.+.+...
T Consensus         6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~~   85 (312)
T cd01489           6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNV   85 (312)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccchH
Confidence            569999999999999984 7777776543321111110              01222233343  444556666543334


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEeec
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      +.++  ++|+||.+.. +...-..+-+.|+ ....||..++.+.+|.
T Consensus        86 ~f~~--~~DvVv~a~D-n~~ar~~in~~c~~~~ip~I~~gt~G~~G~  129 (312)
T cd01489          86 EFFK--QFDLVFNALD-NLAARRHVNKMCLAADVPLIESGTTGFLGQ  129 (312)
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence            6677  8999998754 3333333455566 5678888887777663

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=91.14  E-value=1  Score=38.01  Aligned_cols=94  Identities=19%  Similarity=0.200  Sum_probs=57.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      .|++|-+|..+++.+...|.+|+++++++.+.. .+.        +... -.++..+-.+ .+.+..... .++|.|+++
T Consensus       146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~~g~-~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~  214 (329)
T cd08250         146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE-FLK--------SLGC-DRPINYKTEDLGEVLKKEYP-KGVDVVYES  214 (329)
T ss_pred             EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH-HHH--------HcCC-ceEEeCCCccHHHHHHHhcC-CCCeEEEEC
Confidence            488999999999988888999999988765421 111        1111 1122211111 123333222 479999998


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEeeee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      .+.  ......++.++...++|.+++..
T Consensus       215 ~g~--~~~~~~~~~l~~~g~~v~~g~~~  240 (329)
T cd08250         215 VGG--EMFDTCVDNLALKGRLIVIGFIS  240 (329)
T ss_pred             CcH--HHHHHHHHHhccCCeEEEEeccc
Confidence            773  44555666676666888887643

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=91.13  E-value=1.6  Score=36.68  Aligned_cols=92  Identities=14%  Similarity=0.128  Sum_probs=57.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEec-CCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGD-RKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d-~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      .|++|.+|..+++.+...|.+|+++++++++.. .+.        +  -++ .++..+ ......+.......++|.|++
T Consensus       145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~  213 (323)
T cd05282         145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE-ELK--------A--LGADEVIDSSPEDLAQRVKEATGGAGARLALD  213 (323)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecChHHHH-HHH--------h--cCCCEEecccchhHHHHHHHHhcCCCceEEEE
Confidence            488999999999999999999999988765521 111        0  122 111111 111233444444457999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.+..  .....++.++...+++.++.
T Consensus       214 ~~g~~--~~~~~~~~l~~~g~~v~~g~  238 (323)
T cd05282         214 AVGGE--SATRLARSLRPGGTLVNYGL  238 (323)
T ss_pred             CCCCH--HHHHHHHhhCCCCEEEEEcc
Confidence            88743  24455666666667877654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=91.12  E-value=1.2  Score=37.04  Aligned_cols=91  Identities=18%  Similarity=0.181  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|++++++..+.. .+.        .  .++.. ..+..+   .+.+.......++|.++
T Consensus       146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLE-ACR--------A--LGADV-AINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH--------H--cCCCE-EEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            488999999999999999999999988755421 111        0  11111 122222   23344444334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ++++...  ....++.+....+++.++.
T Consensus       214 ~~~g~~~--~~~~~~~~~~~g~~i~~~~  239 (323)
T cd05276         214 DMVGGDY--LARNLRALAPDGRLVLIGL  239 (323)
T ss_pred             ECCchHH--HHHHHHhhccCCEEEEEec
Confidence            9887432  3344555554557776654

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=91.12  E-value=1.5  Score=37.53  Aligned_cols=90  Identities=16%  Similarity=0.181  Sum_probs=54.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC---Ch-HHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DY-DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~-~~~~~~~~~~~~d~v   76 (287)
                      +||+|-+|...++.+...|.+|+++++++++......        +  .++..+ .|..   +. +.+.+... .++|++
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~--------~--lGa~~v-i~~~~~~~~~~~i~~~~~-~gvD~v  232 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--------K--LGFDEA-FNYKEEPDLDAALKRYFP-EGIDIY  232 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------h--cCCCEE-EECCCcccHHHHHHHHCC-CCcEEE
Confidence            4899999999998888889999998887655221100        0  122111 1222   11 22333322 379999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +.+.|.  ......++.++...+++.++
T Consensus       233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G  258 (348)
T PLN03154        233 FDNVGG--DMLDAALLNMKIHGRIAVCG  258 (348)
T ss_pred             EECCCH--HHHHHHHHHhccCCEEEEEC
Confidence            999883  34555677777556777655

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=91.07  E-value=0.64  Score=40.61  Aligned_cols=65  Identities=17%  Similarity=0.042  Sum_probs=48.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|.+|..++..+.+.|++|++++.++......+.             -..+..|..|.+.+.++++..++|.|+...
T Consensus        19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-------------hheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            45789999999999999999999987654221111             124567788888999988877899998643

>PLN02928 oxidoreductase family protein

Probab=90.93  E-value=0.95  Score=38.80  Aligned_cols=96  Identities=13%  Similarity=0.074  Sum_probs=54.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|+.........       ......+.-+........++.++++  .+|+|+.+...
T Consensus       166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~L~ell~--~aDiVvl~lPl  236 (347)
T PLN02928        166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGL-------LIPNGDVDDLVDEKGGHEDIYEFAG--EADIVVLCCTL  236 (347)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhh-------ccccccccccccccCcccCHHHHHh--hCCEEEECCCC
Confidence            67999999999999999999999886432110000       0000000000000113456778887  88999987665


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +...    ....++.++....||.++-..
T Consensus       237 t~~T~~li~~~~l~~Mk~ga~lINvaRG~  265 (347)
T PLN02928        237 TKETAGIVNDEFLSSMKKGALLVNIARGG  265 (347)
T ss_pred             ChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence            4321    123444455445666665443

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=90.77  E-value=1.1  Score=39.83  Aligned_cols=81  Identities=11%  Similarity=-0.020  Sum_probs=51.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++..+++.......           ..++.+.        .+.++++  ..|+|+.+.+.
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt  319 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN  319 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence            5688999999999999999999988765421100           1122221        2445666  89999987664


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ...-....++.++....++.++
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvG  341 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIG  341 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcC
Confidence            3222345666676555566554

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=90.75  E-value=2.3  Score=36.88  Aligned_cols=104  Identities=15%  Similarity=0.126  Sum_probs=61.7

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCc--EEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~d~~~~~~~~   65 (287)
                      |.|-+|+.++..|...|. ++++++.+.-.....-+..              ....+.+..+.+  +.+...+ +.+.+.
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  126 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV  126 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence            678999999999999984 8888887643211111100              012223333444  4444444 345667


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      ++++  ++|+||.+.... ..-..+-++|. ....+|+.+..+-+|
T Consensus       127 ~~~~--~~DlVid~~Dn~-~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        127 ELLN--GVDLVLDGSDSF-ATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             HHHh--CCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            7787  899999876542 22223345555 556788877655554

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=90.72  E-value=0.91  Score=38.62  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=25.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.+++.|...|.+|++.+|+...
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            67999999999999999999999987643

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.70  E-value=1.4  Score=35.66  Aligned_cols=91  Identities=20%  Similarity=0.256  Sum_probs=54.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +|++| +|..+++.+...|.+|+++++++.+.. .+.        .  .+... ..|..+.   ..+. ......+|+++
T Consensus       141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~-~~~~~~~~~~~~~~-~~~~~~~d~vi  206 (271)
T cd05188         141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE-LAK--------E--LGADH-VIDYKEEDLEEELR-LTGGGGADVVI  206 (271)
T ss_pred             ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH-HHH--------H--hCCce-eccCCcCCHHHHHH-HhcCCCCCEEE
Confidence            47888 999999988889999999998765421 111        0  11111 1122222   2222 22334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++++.. .....+++.++...+++.++..
T Consensus       207 ~~~~~~-~~~~~~~~~l~~~G~~v~~~~~  234 (271)
T cd05188         207 DAVGGP-ETLAQALRLLRPGGRIVVVGGT  234 (271)
T ss_pred             ECCCCH-HHHHHHHHhcccCCEEEEEccC
Confidence            987742 2344566666655678777654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=90.70  E-value=0.49  Score=40.24  Aligned_cols=29  Identities=28%  Similarity=0.332  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|-+|..++..|.+.|++|+++.|+++.
T Consensus        11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618         11 GAGAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            67999999999999999999999997654

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=90.69  E-value=0.28  Score=44.28  Aligned_cols=30  Identities=20%  Similarity=0.211  Sum_probs=27.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |+|.+|+.++..|++.|++|++.++++...
T Consensus        11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~~   40 (495)
T PRK07531         11 GGGVIGGGWAARFLLAGIDVAVFDPHPEAE   40 (495)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            689999999999999999999999987663

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=90.54  E-value=0.74  Score=38.38  Aligned_cols=29  Identities=31%  Similarity=0.335  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.++..|++.|++|++.+|++.+
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~   34 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEV   34 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998765

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=90.48  E-value=1.8  Score=37.28  Aligned_cols=88  Identities=15%  Similarity=0.138  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|-+|..+++.+...|.+|++++.+.++......          .-++..+ .|..+.+.+.+...  ++|+||.+.|.
T Consensus       191 G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~----------~~Ga~~v-i~~~~~~~~~~~~~--~~D~vid~~g~  257 (360)
T PLN02586        191 GLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN----------RLGADSF-LVSTDPEKMKAAIG--TMDYIIDTVSA  257 (360)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH----------hCCCcEE-EcCCCHHHHHhhcC--CCCEEEECCCC
Confidence            46999999999888889998888776544211111          0122211 12333345555444  68999998883


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      . ......++.++...+++.++
T Consensus       258 ~-~~~~~~~~~l~~~G~iv~vG  278 (360)
T PLN02586        258 V-HALGPLLGLLKVNGKLITLG  278 (360)
T ss_pred             H-HHHHHHHHHhcCCcEEEEeC
Confidence            2 23455677777556777665

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=90.37  E-value=1.7  Score=36.64  Aligned_cols=93  Identities=15%  Similarity=0.195  Sum_probs=55.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecC-CChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDR-KDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~-~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|-+|..+++.+.+.|.+|+++++++.+... +.        + ..++ .++..+- ...+.+.+... .++|++++
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~-~~--------~-~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~  220 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW-LV--------E-ELGFDAAINYKTPDLAEALKEAAP-DGIDVYFD  220 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------h-hcCCceEEecCChhHHHHHHHhcc-CCceEEEE
Confidence            4789999999999999999999999887654211 10        0 0111 1221111 11223333332 47999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +.+.  ......++.++...+++.+++.
T Consensus       221 ~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         221 NVGG--EILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             cchH--HHHHHHHHhcCCCceEEEEeec
Confidence            8774  3445566666655678777643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=90.28  E-value=1.4  Score=35.24  Aligned_cols=107  Identities=23%  Similarity=0.279  Sum_probs=65.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCC-----CCCchhhhhh--cCCcEEE---EecCCC--hHHHHhhhcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-----GESDQEFAEF--SSKILHL---KGDRKD--YDFVKSSLSA   70 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~---~~d~~~--~~~~~~~~~~   70 (287)
                      |-|-.|.++++.|++.||+|++.++++....+...     .....++.+.  .+++.++   .+|.++  .+++...++ 
T Consensus         7 GLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~la~~L~-   85 (300)
T COG1023           7 GLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDDLAPLLS-   85 (300)
T ss_pred             ccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHHHHhhcC-
Confidence            45788999999999999999999998865322111     0111122111  2455444   356665  367777777 


Q ss_pred             CCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeee-Eeec
Q 023078           71 KGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG-VYLK  111 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~-~y~~  111 (287)
                       .=|+||.-...+-....+-.+.+. .-.+|+=++|.+ ++|.
T Consensus        86 -~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSGG~~G~  127 (300)
T COG1023          86 -AGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGA  127 (300)
T ss_pred             -CCCEEEECCccchHHHHHHHHHHHhcCCeEEeccCCCCchhh
Confidence             778999866655444444444444 455777666654 5553

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.23  E-value=0.92  Score=38.04  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.+++.|++.|++|.+.+|++++
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~   35 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEA   35 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.19  E-value=0.67  Score=38.43  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=23.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEec
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r   27 (287)
                      +|++|.+|+.++..|+++|.+|++..|
T Consensus       165 iG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        165 VGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             ECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            488888999999999999888888776

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=90.18  E-value=0.34  Score=41.31  Aligned_cols=28  Identities=36%  Similarity=0.462  Sum_probs=21.7

Q ss_pred             CCcccchHHHHHHHHHHC-CCe---EEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~---V~~l~r~   28 (287)
                      .||||++|+.|++.|.++ ..+   +..+...
T Consensus        11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~   42 (347)
T PRK06728         11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSK   42 (347)
T ss_pred             EeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence            499999999999999964 555   5555544

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=90.18  E-value=0.8  Score=37.81  Aligned_cols=29  Identities=31%  Similarity=0.466  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|-.|++++.+|++.||+|++.+|..++
T Consensus        42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k   70 (327)
T KOG0409|consen   42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDK   70 (327)
T ss_pred             eeccchHHHHHHHHHcCCEEEEEeCcHHH
Confidence            46788999999999999999999998877

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=90.17  E-value=0.99  Score=38.61  Aligned_cols=30  Identities=20%  Similarity=0.365  Sum_probs=24.5

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~   30 (287)
                      +||||++|++|++.|.+++ .++..+..+..
T Consensus         6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~~   36 (341)
T TIGR00978         6 LGATGLVGQKFVKLLAKHPYFELAKVVASPR   36 (341)
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEEEChh
Confidence            5999999999999998876 58888855443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK05442 malate dehydrogenase; Provisional

Probab=89.94  E-value=1.8  Score=36.81  Aligned_cols=30  Identities=20%  Similarity=0.127  Sum_probs=24.4

Q ss_pred             CCcccchHHHHHHHHHHCC--C-----eEEEEecCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--H-----QVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~-----~V~~l~r~~~   30 (287)
                      +||+|.+|+.++..|+..+  .     ++++++.++.
T Consensus        10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442         10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            5889999999999998765  2     7889988643

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=89.91  E-value=1.9  Score=35.03  Aligned_cols=79  Identities=19%  Similarity=0.103  Sum_probs=55.5

Q ss_pred             hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCCC-cc
Q 023078            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE-AD   85 (287)
Q Consensus         7 iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~-~~   85 (287)
                      =|+.|++.|.++|+ |.+.+-.+-. ...+..        ......++.|-+.+.+.+.+.+++.++++||+..=+- ..
T Consensus        11 E~r~la~~L~~~g~-v~~sv~t~~g-~~~~~~--------~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~   80 (249)
T PF02571_consen   11 EGRKLAERLAEAGY-VIVSVATSYG-GELLKP--------ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFAAE   80 (249)
T ss_pred             HHHHHHHHHHhcCC-EEEEEEhhhh-Hhhhcc--------ccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchHHH
Confidence            48899999999998 6554443322 111110        0246678888888999999999999999999865433 34


Q ss_pred             chHHHHHhCC
Q 023078           86 EVEPILDALP   95 (287)
Q Consensus        86 ~~~~l~~a~~   95 (287)
                      -.+++.++|+
T Consensus        81 is~na~~a~~   90 (249)
T PF02571_consen   81 ISQNAIEACR   90 (249)
T ss_pred             HHHHHHHHHh
Confidence            4677888887

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.88  E-value=0.82  Score=38.10  Aligned_cols=28  Identities=21%  Similarity=0.400  Sum_probs=25.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~   28 (287)
                      +|.+|.+|+.++..|+++|++|++..|.
T Consensus       165 IG~s~ivG~PmA~~L~~~gatVtv~~~~  192 (301)
T PRK14194        165 IGRSNIVGKPMAALLLQAHCSVTVVHSR  192 (301)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence            4778899999999999999999998664

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.87  E-value=0.19  Score=42.39  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..++..|++.|++|+++++++..
T Consensus        11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130         11 GAGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            57999999999999999999999987765

>TIGR00936 ahcY adenosylhomocysteinase

Probab=89.82  E-value=1.2  Score=38.84  Aligned_cols=82  Identities=7%  Similarity=-0.008  Sum_probs=50.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|+++.+++.+.....           ..++.+.     +   +.++++  +.|+||.+.|.
T Consensus       202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-----------~~G~~v~-----~---leeal~--~aDVVItaTG~  260 (406)
T TIGR00936       202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-----------MDGFRVM-----T---MEEAAK--IGDIFITATGN  260 (406)
T ss_pred             CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-----------hcCCEeC-----C---HHHHHh--cCCEEEECCCC
Confidence            6799999999999999999999988875521111           1233222     1   123455  78999987664


Q ss_pred             CccchHHHHHhCCCCCcEEEEee
Q 023078           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ...-....+..+++-..++.++.
T Consensus       261 ~~vI~~~~~~~mK~GailiN~G~  283 (406)
T TIGR00936       261 KDVIRGEHFENMKDGAIVANIGH  283 (406)
T ss_pred             HHHHHHHHHhcCCCCcEEEEECC
Confidence            32222234455555556666554

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=89.81  E-value=1.7  Score=36.92  Aligned_cols=89  Identities=13%  Similarity=0.091  Sum_probs=53.4

Q ss_pred             ccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEEEcc
Q 023078            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|-+|..+++.+...|.+ |+++++++++.. ..        .+  -++..+ .|..+  .+.+.+.....++|+||.+.
T Consensus       172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~-~~--------~~--~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~  239 (339)
T cd08239         172 AGPVGLGALMLARALGAEDVIGVDPSPERLE-LA--------KA--LGADFV-INSGQDDVQEIRELTSGAGADVAIECS  239 (339)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HH--------HH--hCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence            489999999988888987 999888765521 11        11  122111 22222  33444444444799999988


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +... .....++.++...+++.++.
T Consensus       240 g~~~-~~~~~~~~l~~~G~~v~~g~  263 (339)
T cd08239         240 GNTA-ARRLALEAVRPWGRLVLVGE  263 (339)
T ss_pred             CCHH-HHHHHHHHhhcCCEEEEEcC
Confidence            7542 22345566665567776663

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=89.78  E-value=1.9  Score=35.88  Aligned_cols=92  Identities=22%  Similarity=0.216  Sum_probs=55.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|-+|..+++.+...|.+|++++++..+.. .+.        .  .++ .++..+-.+ .+.+.......++|.+++
T Consensus       146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~  214 (323)
T cd08241         146 LGAAGGVGLAAVQLAKALGARVIAAASSEEKLA-LAR--------A--LGADHVIDYRDPDLRERVKALTGGRGVDVVYD  214 (323)
T ss_pred             EcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH-HHH--------H--cCCceeeecCCccHHHHHHHHcCCCCcEEEEE
Confidence            478899999999999999999999988765421 111        0  111 111111111 234444444447999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.+.  ......++.++...+++.++.
T Consensus       215 ~~g~--~~~~~~~~~~~~~g~~v~~~~  239 (323)
T cd08241         215 PVGG--DVFEASLRSLAWGGRLLVIGF  239 (323)
T ss_pred             CccH--HHHHHHHHhhccCCEEEEEcc
Confidence            8774  334445666665557776664

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=89.68  E-value=2.1  Score=35.54  Aligned_cols=92  Identities=20%  Similarity=0.228  Sum_probs=56.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      .|++|-+|..+++.+...|.+|+++++++.+.. .+.        .  -++ .++..+-.+ .+.+.......++|.+++
T Consensus       143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~  211 (320)
T cd05286         143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE-LAR--------A--AGADHVINYRDEDFVERVREITGGRGVDVVYD  211 (320)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHH--------H--CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEE
Confidence            478999999999998889999999987765421 111        1  122 112111111 233444444457999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.+.  ......++.++...+++.++.
T Consensus       212 ~~~~--~~~~~~~~~l~~~g~~v~~g~  236 (320)
T cd05286         212 GVGK--DTFEGSLDSLRPRGTLVSFGN  236 (320)
T ss_pred             CCCc--HhHHHHHHhhccCcEEEEEec
Confidence            8774  334455666665567877764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=89.59  E-value=1.9  Score=36.34  Aligned_cols=92  Identities=17%  Similarity=0.155  Sum_probs=57.4

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCC-ChHHHHhhhccCCccEEEEc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRK-DYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~-~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||+|-+|..+++.+...|.+|+++++++.+.. .+.        +  .++ .++..+-. ..+.+.......++|+++++
T Consensus       148 g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~-~~~--------~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~  216 (327)
T PRK10754        148 AAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ-RAK--------K--AGAWQVINYREENIVERVKEITGGKKVRVVYDS  216 (327)
T ss_pred             eCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H--CCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEEC
Confidence            78999999999888888999999888765521 111        1  122 22221111 12345555554579999998


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      .+.  ......++.++...+++.++..
T Consensus       217 ~~~--~~~~~~~~~l~~~g~~v~~g~~  241 (327)
T PRK10754        217 VGK--DTWEASLDCLQRRGLMVSFGNA  241 (327)
T ss_pred             CcH--HHHHHHHHHhccCCEEEEEccC
Confidence            763  3344556666666688877643

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=89.53  E-value=0.85  Score=39.23  Aligned_cols=24  Identities=21%  Similarity=0.181  Sum_probs=19.3

Q ss_pred             CceEEeeCCCcccHHHHHHHHHHH
Q 023078          210 RQVFNISGEKYVTFDGLARACAKA  233 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~  233 (287)
                      .+.+++.-..+++..++.+.+.+.
T Consensus       276 s~sv~ve~~~~~~~~~i~~~L~~~  299 (369)
T PRK06598        276 SQALTIKLKKDVPLAEIEEILAAH  299 (369)
T ss_pred             EEEEEEEECCCCCHHHHHHHHHhc
Confidence            466777777889999999998874

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=89.51  E-value=4.1  Score=33.83  Aligned_cols=101  Identities=20%  Similarity=0.208  Sum_probs=62.4

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCC--------------CCchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|..+++.|...|. ++++.+.+.-.....-..              .....+.+..+.+.+  +..++ +.    
T Consensus        26 G~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~~-~~----  100 (286)
T cd01491          26 GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGPL-TT----  100 (286)
T ss_pred             cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEeccC-CH----
Confidence            568899999999999985 677777654332111110              012233344454443  33332 22    


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEeec
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~  111 (287)
                      +.+.  ++|+||.+.. +......+-++|+ ....||...+.+.+|.
T Consensus       101 ~~l~--~fdvVV~~~~-~~~~~~~in~~c~~~~ipfI~a~~~G~~G~  144 (286)
T cd01491         101 DELL--KFQVVVLTDA-SLEDQLKINEFCHSPGIKFISADTRGLFGS  144 (286)
T ss_pred             HHHh--cCCEEEEecC-CHHHHHHHHHHHHHcCCEEEEEeccccEEE
Confidence            3455  7899988754 5555556667787 6678999888888774

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=89.36  E-value=0.57  Score=40.24  Aligned_cols=30  Identities=23%  Similarity=0.480  Sum_probs=28.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |+||+|......|.+.||+|++++.++++.
T Consensus         7 GtGYVGLv~g~~lA~~GHeVv~vDid~~KV   36 (414)
T COG1004           7 GTGYVGLVTGACLAELGHEVVCVDIDESKV   36 (414)
T ss_pred             CCchHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence            799999999999999999999999998873

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=89.33  E-value=1  Score=34.20  Aligned_cols=48  Identities=23%  Similarity=0.324  Sum_probs=35.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+++.+|..+++.|.++|.+|+++.|+.                                +++.+.+.  ++|+||.+.
T Consensus        50 iG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------------~~l~~~l~--~aDiVIsat   95 (168)
T cd01080          50 VGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------------KNLKEHTK--QADIVIVAV   95 (168)
T ss_pred             ECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------------hhHHHHHh--hCCEEEEcC
Confidence            36656679989999999888888877752                                23455666  889999877


Q ss_pred             CC
Q 023078           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      +.
T Consensus        96 ~~   97 (168)
T cd01080          96 GK   97 (168)
T ss_pred             CC
Confidence            65

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=89.32  E-value=0.59  Score=39.03  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=26.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.++..|.+.|++|.+.+|++.+
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~   37 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA   37 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999988765

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=89.30  E-value=0.71  Score=29.98  Aligned_cols=29  Identities=38%  Similarity=0.581  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.|++.-
T Consensus         6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    6 GGGFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             SSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            78999999999999999999999998765

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=89.25  E-value=1.3  Score=40.46  Aligned_cols=90  Identities=12%  Similarity=0.115  Sum_probs=60.1

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|-+|++++..|+..| .++++++-+... ....+.+. .+.-..+.+++.+-..+..+.+++.+.++  +.|+|++.+
T Consensus       136 G~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl-~e~A~~~n~~v~v~~i~~~~~~dl~ev~~--~~DiVi~vs  212 (637)
T TIGR03693       136 GSGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHEL-AEIAEETDDALLVQEIDFAEDQHLHEAFE--PADWVLYVS  212 (637)
T ss_pred             ecCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHH-HHHHHHhCCCCceEeccCCcchhHHHhhc--CCcEEEEEC
Confidence            67899999999999999 467677543331 01101111 11222345677777777788899999998  999999988


Q ss_pred             CC-CccchHHHHHhCC
Q 023078           81 GR-EADEVEPILDALP   95 (287)
Q Consensus        81 ~~-~~~~~~~l~~a~~   95 (287)
                      .. .......+.++|.
T Consensus       213 Ddy~~~~Lr~lN~acv  228 (637)
T TIGR03693       213 DNGDIDDLHALHAFCK  228 (637)
T ss_pred             CCCChHHHHHHHHHHH
Confidence            74 3345666666665

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=89.20  E-value=1.1  Score=37.49  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=26.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.+++.|++.|++|++.+|++++
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~   35 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEA   35 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            57899999999999999999999998665

>PRK07574 formate dehydrogenase; Provisional

Probab=89.19  E-value=0.82  Score=39.71  Aligned_cols=84  Identities=18%  Similarity=0.072  Sum_probs=51.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|...... ...          ..+++       -..++.++++  .+|+|+.+...
T Consensus       199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-~~~----------~~g~~-------~~~~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEE-VEQ----------ELGLT-------YHVSFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCCchh-hHh----------hcCce-------ecCCHHHHhh--cCCEEEEcCCC
Confidence            5789999999999999999999998753211 000          01221       1234566777  88999876665


Q ss_pred             CccchHH-----HHHhCCCCCcEEEEeeee
Q 023078           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~~~~-----l~~a~~~~~~~i~~Ss~~  107 (287)
                      +. .++.     .+..++.-.-||.+|...
T Consensus       259 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        259 HP-ETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             CH-HHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence            43 2333     344455444566665443

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=89.07  E-value=0.79  Score=38.54  Aligned_cols=28  Identities=11%  Similarity=0.120  Sum_probs=22.2

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (287)
                      .||||++|..|++.|.++. .++..+..+
T Consensus         8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~   36 (313)
T PRK11863          8 DGEAGTTGLQIRERLAGRSDIELLSIPEA   36 (313)
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence            4999999999999999886 366655544

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=89.03  E-value=1.4  Score=36.90  Aligned_cols=30  Identities=27%  Similarity=0.493  Sum_probs=27.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|..++..|++.|++|++.+|++.+.
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~   37 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQAV   37 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            579999999999999999999999987663

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=89.01  E-value=2.5  Score=35.58  Aligned_cols=91  Identities=16%  Similarity=0.180  Sum_probs=55.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcE-EEEecCCC--hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD--YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~--~~~~~~~~~~~~~d~vi   77 (287)
                      .|++|-+|..+++.+...|.+++++++++++... +.        .  -++. ++...-.+  ...+.......++|.++
T Consensus       147 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i  215 (334)
T PTZ00354        147 HAGASGVGTAAAQLAEKYGAATIITTSSEEKVDF-CK--------K--LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVL  215 (334)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCcEEEecCChhHHHHHHHHHhCCCCceEEE
Confidence            4889999999999999999998888877654211 11        1  1221 12111111  23344444445799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++.+.  ......++.+....+++.++
T Consensus       216 ~~~~~--~~~~~~~~~l~~~g~~i~~~  240 (334)
T PTZ00354        216 DCVGG--SYLSETAEVLAVDGKWIVYG  240 (334)
T ss_pred             ECCch--HHHHHHHHHhccCCeEEEEe
Confidence            98762  34445566666556777655

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=89.00  E-value=1.4  Score=39.68  Aligned_cols=30  Identities=17%  Similarity=0.447  Sum_probs=27.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|-.|+.++..|+++|++|++.+|+.++.
T Consensus        13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~   42 (493)
T PLN02350         13 GLAVMGQNLALNIAEKGFPISVYNRTTSKV   42 (493)
T ss_pred             eeHHHHHHHHHHHHhCCCeEEEECCCHHHH
Confidence            568899999999999999999999987764

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=88.99  E-value=0.56  Score=40.07  Aligned_cols=68  Identities=16%  Similarity=0.211  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH-HHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~d~vi~~a   80 (287)
                      |+||+.+.+++.|.+++ -+|++.+|......+...          ..+++.+..|+.+++ .+....+  ..|+++.+.
T Consensus         9 gsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~----------~~~~~av~ldv~~~~~~L~~~v~--~~D~viSLl   76 (445)
T KOG0172|consen    9 GSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK----------GINIKAVSLDVADEELALRKEVK--PLDLVISLL   76 (445)
T ss_pred             cCccccchHHHHHhhcCCceEEEehhhHHHHHHHhc----------CCCccceEEEccchHHHHHhhhc--ccceeeeec
Confidence            78999999999999885 688888887766433332          345888999999887 8888888  889999775


Q ss_pred             CC
Q 023078           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      ..
T Consensus        77 P~   78 (445)
T KOG0172|consen   77 PY   78 (445)
T ss_pred             cc
Confidence            54

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=88.90  E-value=1.6  Score=37.82  Aligned_cols=26  Identities=27%  Similarity=0.319  Sum_probs=23.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (287)
                      |.|.||+.+++.|...|.+|.+.++.
T Consensus       123 G~G~IG~~va~~l~a~G~~V~~~Dp~  148 (381)
T PRK00257        123 GAGHVGGRLVRVLRGLGWKVLVCDPP  148 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCc
Confidence            67999999999999999999998764

>PRK06487 glycerate dehydrogenase; Provisional

Probab=88.85  E-value=1.5  Score=37.03  Aligned_cols=78  Identities=17%  Similarity=0.063  Sum_probs=47.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|..-|-+|++.+|....                 ...        ...++.++++  ..|+|+.+...
T Consensus       155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl  207 (317)
T PRK06487        155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL  207 (317)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence            57999999999999889999998875321                 001        1124666777  78888866554


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +...    ....++.++....||.+|-..
T Consensus       208 t~~T~~li~~~~~~~mk~ga~lIN~aRG~  236 (317)
T PRK06487        208 TEHTRHLIGARELALMKPGALLINTARGG  236 (317)
T ss_pred             ChHHhcCcCHHHHhcCCCCeEEEECCCcc
Confidence            4321    222344444444555555433

>PRK07411 hypothetical protein; Validated

Probab=88.84  E-value=4.4  Score=35.41  Aligned_cols=104  Identities=15%  Similarity=0.015  Sum_probs=60.9

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCc--EEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-+..              ....+.+..+.+  +.+...++ .+...
T Consensus        45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~-~~~~~  123 (390)
T PRK07411         45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS-SENAL  123 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC-HHhHH
Confidence            678899999999999985 6776666432211111100              122233334444  44444444 34556


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.+.  ++|+||.+.... ..-..+-++|. ..+.+|+.+..+-+|
T Consensus       124 ~~~~--~~D~Vvd~~d~~-~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        124 DILA--PYDVVVDGTDNF-PTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             HHHh--CCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            6777  899999876643 22222445555 567888877766666

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=88.82  E-value=2.8  Score=33.70  Aligned_cols=105  Identities=11%  Similarity=0.116  Sum_probs=60.0

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccc---cccC--CCC---------CchhhhhhcCC--cEEEEecCCChHHH-
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI---AQQL--PGE---------SDQEFAEFSSK--ILHLKGDRKDYDFV-   64 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~---~~~~--~~~---------~~~~~~~~~~~--~~~~~~d~~~~~~~-   64 (287)
                      |.|-+|..+++.|...|. ++++++.+.-..   ..+.  ...         ....+.+..+.  ++.+..++.+.+.+ 
T Consensus         6 G~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~~~~~~   85 (234)
T cd01484           6 GAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGPEQDFN   85 (234)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCChhhhch
Confidence            688999999999999985 677777754321   1111  000         01112233333  44455666443332 


Q ss_pred             HhhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      .+.++  ++|+|+.+.. +...-..+-+.|. ..+.+|..++.+.+|
T Consensus        86 ~~f~~--~~DvVi~a~D-n~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          86 DTFFE--QFHIIVNALD-NIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             HHHHh--CCCEEEECCC-CHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence            34566  8999998644 3333333445555 556788877766555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=88.75  E-value=1.4  Score=37.24  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=23.2

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~   29 (287)
                      .|||||.|..|++.|..+. .++...+.+.
T Consensus         8 vGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           8 VGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             EcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            4999999999999999985 5766655544

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=88.69  E-value=0.93  Score=33.21  Aligned_cols=67  Identities=22%  Similarity=0.184  Sum_probs=37.2

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC----------hHHHHhhh--c
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----------YDFVKSSL--S   69 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----------~~~~~~~~--~   69 (287)
                      ||.+..-..|++.|.++|++|.+++...........          ..++.+....+..          ...+...+  +
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   70 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEE----------EDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAAR   70 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEE----------ETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHC
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccc----------cCCceEEeccCCccchhhhhHHHHHHHHHHHhhh
Confidence            677778889999999999999999976665322111          2455555443321          24555666  5


Q ss_pred             cCCccEEEE
Q 023078           70 AKGFDVVYD   78 (287)
Q Consensus        70 ~~~~d~vi~   78 (287)
                      ..++|+|..
T Consensus        71 ~~~~Dvv~~   79 (160)
T PF13579_consen   71 RERPDVVHA   79 (160)
T ss_dssp             T---SEEEE
T ss_pred             ccCCeEEEe
Confidence            567886663

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=88.63  E-value=2.6  Score=36.22  Aligned_cols=89  Identities=13%  Similarity=0.087  Sum_probs=54.1

Q ss_pred             CcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC---hHHHHhhhccCCccEE
Q 023078            2 GGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD---YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~---~~~~~~~~~~~~~d~v   76 (287)
                      | +|-+|...++.+...|.+ |+++++++.+.. ..        .+  .+. .++  |..+   .+.+.+.....++|+|
T Consensus       184 G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~-~~--------~~--~Ga~~~i--~~~~~~~~~~i~~~~~~~g~d~v  249 (358)
T TIGR03451       184 G-CGGVGDAAIAGAALAGASKIIAVDIDDRKLE-WA--------RE--FGATHTV--NSSGTDPVEAIRALTGGFGADVV  249 (358)
T ss_pred             C-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HH--------HH--cCCceEE--cCCCcCHHHHHHHHhCCCCCCEE
Confidence            5 489999999988888974 888888766521 11        11  122 122  2222   2344444443479999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.+.|.. ......++.++...+++.++.
T Consensus       250 id~~g~~-~~~~~~~~~~~~~G~iv~~G~  277 (358)
T TIGR03451       250 IDAVGRP-ETYKQAFYARDLAGTVVLVGV  277 (358)
T ss_pred             EECCCCH-HHHHHHHHHhccCCEEEEECC
Confidence            9998843 234455666775567776663

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=88.61  E-value=1.8  Score=36.47  Aligned_cols=80  Identities=14%  Similarity=0.096  Sum_probs=47.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.+..-|-+|.+.+|......               ..+.        ..++.++++  .+|+|+.....
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~---------------~~~~--------~~~l~ell~--~sDvv~lh~Pl  206 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNKN---------------EEYE--------RVSLEELLK--TSDIISIHAPL  206 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCccccc---------------cCce--------eecHHHHhh--cCCEEEEeCCC
Confidence            5799999999999888999999988532210               1111        224666776  77887755544


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +.+.    ....++.++....||.+|-..
T Consensus       207 t~~T~~li~~~~~~~Mk~~a~lIN~aRG~  235 (311)
T PRK08410        207 NEKTKNLIAYKELKLLKDGAILINVGRGG  235 (311)
T ss_pred             CchhhcccCHHHHHhCCCCeEEEECCCcc
Confidence            3221    222344444444555555443

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=88.59  E-value=1.9  Score=37.35  Aligned_cols=26  Identities=23%  Similarity=0.164  Sum_probs=23.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (287)
                      |.|.||+.+++.|..-|.+|.+.++.
T Consensus       123 G~G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        123 GVGNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCc
Confidence            67999999999999999999998753

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=88.57  E-value=0.4  Score=37.05  Aligned_cols=29  Identities=28%  Similarity=0.449  Sum_probs=23.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.||+|..++..|.+.|++|++++.++..
T Consensus         7 GlGyvGl~~A~~lA~~G~~V~g~D~~~~~   35 (185)
T PF03721_consen    7 GLGYVGLPLAAALAEKGHQVIGVDIDEEK   35 (185)
T ss_dssp             --STTHHHHHHHHHHTTSEEEEE-S-HHH
T ss_pred             CCCcchHHHHHHHHhCCCEEEEEeCChHH
Confidence            68999999999999999999999998875

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=88.54  E-value=1.5  Score=32.85  Aligned_cols=71  Identities=14%  Similarity=0.092  Sum_probs=45.2

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      =|.+|+.+++.|...|.+|++...++-...+-.           -.+++..        .+.+++.  ..|++|.+.|..
T Consensus        31 YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-----------~dGf~v~--------~~~~a~~--~adi~vtaTG~~   89 (162)
T PF00670_consen   31 YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-----------MDGFEVM--------TLEEALR--DADIFVTATGNK   89 (162)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-----------HTT-EEE---------HHHHTT--T-SEEEE-SSSS
T ss_pred             CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-----------hcCcEec--------CHHHHHh--hCCEEEECCCCc
Confidence            488999999999999999999999876632211           2344432        2556676  889999888875


Q ss_pred             ccchHHHHHhCC
Q 023078           84 ADEVEPILDALP   95 (287)
Q Consensus        84 ~~~~~~l~~a~~   95 (287)
                      ..-...-++.++
T Consensus        90 ~vi~~e~~~~mk  101 (162)
T PF00670_consen   90 DVITGEHFRQMK  101 (162)
T ss_dssp             SSB-HHHHHHS-
T ss_pred             cccCHHHHHHhc
Confidence            554556667776

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=88.51  E-value=0.25  Score=34.88  Aligned_cols=86  Identities=17%  Similarity=0.135  Sum_probs=42.8

Q ss_pred             cccchHHHHHHHHHHC----CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~----g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |.|.+|+.+++.|.++    +.+|.++..+.......        ......+.. .   ..+.+.+.+.   ..+|+||.
T Consensus         1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~--------~~~~~~~~~-~---~~~~~~~~~~---~~~dvvVE   65 (117)
T PF03447_consen    1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKD--------WAASFPDEA-F---TTDLEELIDD---PDIDVVVE   65 (117)
T ss_dssp             --SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETT--------HHHHHTHSC-E---ESSHHHHHTH---TT-SEEEE
T ss_pred             CCCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhh--------hhhhccccc-c---cCCHHHHhcC---cCCCEEEE
Confidence            6799999999999986    46777766655211100        000001111 1   1233443332   37999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +++.. .....+.++++.-+++|-.|
T Consensus        66 ~t~~~-~~~~~~~~~L~~G~~VVt~n   90 (117)
T PF03447_consen   66 CTSSE-AVAEYYEKALERGKHVVTAN   90 (117)
T ss_dssp             -SSCH-HHHHHHHHHHHTTCEEEES-
T ss_pred             CCCch-HHHHHHHHHHHCCCeEEEEC
Confidence            96543 22333445555556776554

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=88.41  E-value=1.2  Score=37.29  Aligned_cols=28  Identities=11%  Similarity=0.089  Sum_probs=22.2

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (287)
                      .|||||.|..|++.|.... .++..+..+
T Consensus         7 vGasGy~G~el~rlL~~HP~~el~~l~s~   35 (310)
T TIGR01851         7 DGEAGTTGLQIRERLSGRDDIELLSIAPD   35 (310)
T ss_pred             ECCCChhHHHHHHHHhCCCCeEEEEEecc
Confidence            4999999999999999975 466665433

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=88.27  E-value=3  Score=31.19  Aligned_cols=68  Identities=19%  Similarity=0.268  Sum_probs=46.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC--C-----hHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-----YDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~-----~~~~~~~~~~~~~   73 (287)
                      .||-|-+|++.++.+..++|-|.-++-.+....               ..-.++.+|-.  +     .+++.+.+...+.
T Consensus         9 YGGkGALGSacv~~FkannywV~siDl~eNe~A---------------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    9 YGGKGALGSACVEFFKANNYWVLSIDLSENEQA---------------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             EcCcchHhHHHHHHHHhcCeEEEEEeecccccc---------------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            388999999999999999999988877654411               11122333332  1     2455566777799


Q ss_pred             cEEEEccCCC
Q 023078           74 DVVYDINGRE   83 (287)
Q Consensus        74 d~vi~~a~~~   83 (287)
                      |.|++.+|-.
T Consensus        74 Dav~CVAGGW   83 (236)
T KOG4022|consen   74 DAVFCVAGGW   83 (236)
T ss_pred             ceEEEeeccc
Confidence            9999988753

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=88.24  E-value=2.8  Score=34.97  Aligned_cols=92  Identities=21%  Similarity=0.169  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      +|++|-+|..+++.+...|.+|+++++++.... ...        .  -++..+ .+..+   .+.+.......++|.++
T Consensus       146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~--------~--~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i  213 (325)
T TIGR02824       146 HGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACE--------A--LGADIA-INYREEDFVEVVKAETGGKGVDVIL  213 (325)
T ss_pred             EcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH--------H--cCCcEE-EecCchhHHHHHHHHcCCCCeEEEE
Confidence            488999999999999999999999988765421 111        1  112111 11222   23344444334699999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++++..  .....++.+....+++.++..
T Consensus       214 ~~~~~~--~~~~~~~~l~~~g~~v~~g~~  240 (325)
T TIGR02824       214 DIVGGS--YLNRNIKALALDGRIVQIGFQ  240 (325)
T ss_pred             ECCchH--HHHHHHHhhccCcEEEEEecC
Confidence            987742  233344555555678777653

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=87.98  E-value=0.82  Score=38.68  Aligned_cols=29  Identities=34%  Similarity=0.572  Sum_probs=26.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..++..|.+.|++|++++|++..
T Consensus         8 G~G~mG~~~a~~L~~~g~~V~~~~r~~~~   36 (325)
T PRK00094          8 GAGSWGTALAIVLARNGHDVTLWARDPEQ   36 (325)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            46999999999999999999999998655

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=87.95  E-value=2.2  Score=36.16  Aligned_cols=29  Identities=21%  Similarity=0.159  Sum_probs=25.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|-||+.+++.|..-|.+|.+.++....
T Consensus       149 G~G~IG~~va~~l~afgm~v~~~d~~~~~  177 (324)
T COG0111         149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPR  177 (324)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCCch
Confidence            57999999999999999999999994333

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=87.77  E-value=0.45  Score=39.44  Aligned_cols=29  Identities=31%  Similarity=0.297  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..++..|.+.|++|.+.+|++..
T Consensus         7 G~G~mG~sla~~L~~~g~~V~~~d~~~~~   35 (279)
T PRK07417          7 GLGLIGGSLGLDLRSLGHTVYGVSRREST   35 (279)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            47999999999999999999999998655

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=87.74  E-value=1.1  Score=37.69  Aligned_cols=27  Identities=30%  Similarity=0.494  Sum_probs=25.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~   29 (287)
                      |+|.+|+.++..|.+.|++|++.+|+.
T Consensus        11 G~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619         11 GAGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            679999999999999999999999874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=87.58  E-value=1.3  Score=34.75  Aligned_cols=29  Identities=21%  Similarity=0.323  Sum_probs=25.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+++++.|.+.|++|++.++++..
T Consensus        35 G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~   63 (200)
T cd01075          35 GLGKVGYKLAEHLLEEGAKLIVADINEEA   63 (200)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            34789999999999999999998887554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=87.44  E-value=0.59  Score=40.71  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=25.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|++|..++..|. .||+|+++++++.+.
T Consensus         7 GlGyvGl~~A~~lA-~G~~VigvD~d~~kv   35 (388)
T PRK15057          7 GTGYVGLSNGLLIA-QNHEVVALDILPSRV   35 (388)
T ss_pred             CCCHHHHHHHHHHH-hCCcEEEEECCHHHH
Confidence            68999999996665 599999999998774

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=87.15  E-value=1.2  Score=37.45  Aligned_cols=67  Identities=13%  Similarity=0.237  Sum_probs=41.5

Q ss_pred             CcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhh---hhc--CCcEEEEecCCChHHHHhhhccCCcc
Q 023078            2 GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFA---EFS--SKILHLKGDRKDYDFVKSSLSAKGFD   74 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~d~~~~~~~~~~~~~~~~d   74 (287)
                      |+ |.+|+.++..|+.++  .++++++.++.......     .++.   .+.  .++.+..+   +    .+.++  ++|
T Consensus         6 Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a-----~DL~~~~~~~~~~~~~i~~~---~----y~~~~--~aD   70 (307)
T cd05290           6 GA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEA-----LDFHHATALTYSTNTKIRAG---D----YDDCA--DAD   70 (307)
T ss_pred             CC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHH-----HHHHhhhccCCCCCEEEEEC---C----HHHhC--CCC
Confidence            55 999999999999886  47999998765421111     1111   111  12333322   2    23455  899


Q ss_pred             EEEEccCCC
Q 023078           75 VVYDINGRE   83 (287)
Q Consensus        75 ~vi~~a~~~   83 (287)
                      +||-++|..
T Consensus        71 ivvitaG~~   79 (307)
T cd05290          71 IIVITAGPS   79 (307)
T ss_pred             EEEECCCCC
Confidence            999999863

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06849 hypothetical protein; Provisional

Probab=87.14  E-value=1.2  Score=38.83  Aligned_cols=72  Identities=19%  Similarity=0.232  Sum_probs=46.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC----hHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~d~v   76 (287)
                      ||++..+|..+++.|.+.|++|++++..+......         +....+...+...-.+    .+.+.++.++.++|+|
T Consensus        10 ~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~---------s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849         10 TGARAPAALELARLFHNAGHTVILADSLKYPLSRF---------SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH---------HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            68888999999999999999999998876432110         0001222222112223    2566666777789999


Q ss_pred             EEccC
Q 023078           77 YDING   81 (287)
Q Consensus        77 i~~a~   81 (287)
                      |-+..
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            97654

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=87.08  E-value=4.3  Score=33.85  Aligned_cols=90  Identities=22%  Similarity=0.204  Sum_probs=56.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      .|++|-+|..+++.+...|.+|+++++++.+.. .+.          ..++..+..+-.+ .+.+.+.  ..++|.++++
T Consensus       149 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----------~~g~~~~~~~~~~~~~~i~~~--~~~~d~vl~~  215 (320)
T cd08243         149 RGGTSSVGLAALKLAKALGATVTATTRSPERAA-LLK----------ELGADEVVIDDGAIAEQLRAA--PGGFDKVLEL  215 (320)
T ss_pred             EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH----------hcCCcEEEecCccHHHHHHHh--CCCceEEEEC
Confidence            488999999999999999999999988865521 111          1122222111111 2334444  3489999998


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      .+.  ......++.+....+++.++.
T Consensus       216 ~~~--~~~~~~~~~l~~~g~~v~~g~  239 (320)
T cd08243         216 VGT--ATLKDSLRHLRPGGIVCMTGL  239 (320)
T ss_pred             CCh--HHHHHHHHHhccCCEEEEEcc
Confidence            873  334555666665567776664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.03  E-value=1.7  Score=36.02  Aligned_cols=49  Identities=24%  Similarity=0.407  Sum_probs=37.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+++.+|+.++..|+++|.+|+.+.++.                                ..+.+.++  ++|+||...
T Consensus       164 IGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------------~~l~~~~~--~ADIVIsAv  209 (286)
T PRK14175        164 IGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------------KDMASYLK--DADVIVSAV  209 (286)
T ss_pred             ECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHHHh--hCCEEEECC
Confidence            47888899999999999999988887631                                13455666  889999887


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      |..
T Consensus       210 g~p  212 (286)
T PRK14175        210 GKP  212 (286)
T ss_pred             CCC
Confidence            753

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=86.98  E-value=3.5  Score=35.81  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|...++.+...|.+|+++++++++..+...          .-++..+ .|..+.+.+.+...  ++|+|+.+.|.
T Consensus       186 G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~----------~lGa~~~-i~~~~~~~v~~~~~--~~D~vid~~G~  252 (375)
T PLN02178        186 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAID----------RLGADSF-LVTTDSQKMKEAVG--TMDFIIDTVSA  252 (375)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH----------hCCCcEE-EcCcCHHHHHHhhC--CCcEEEECCCc
Confidence            45899999999888889999998876543111111          1122211 13333345555544  68999999874


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .. .....++.++...+++.++
T Consensus       253 ~~-~~~~~~~~l~~~G~iv~vG  273 (375)
T PLN02178        253 EH-ALLPLFSLLKVSGKLVALG  273 (375)
T ss_pred             HH-HHHHHHHhhcCCCEEEEEc
Confidence            32 3455667777556777665

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=86.98  E-value=0.64  Score=38.43  Aligned_cols=31  Identities=26%  Similarity=0.416  Sum_probs=27.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      ++|.|.+|+.+++.|.++|+.|.++.++.+.
T Consensus         8 IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~   38 (279)
T COG0287           8 IVGLGLMGGSLARALKEAGLVVRIIGRDRSA   38 (279)
T ss_pred             EECCchHHHHHHHHHHHcCCeEEEEeecCcH
Confidence            3689999999999999999999888887665

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=86.95  E-value=3.4  Score=34.49  Aligned_cols=28  Identities=29%  Similarity=0.459  Sum_probs=25.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (287)
                      |.|.+|..+++.|++.|++|.+.+|+++
T Consensus         7 GlG~MG~~ma~~L~~~G~~v~v~~~~~~   34 (292)
T PRK15059          7 GLGIMGTPMAINLARAGHQLHVTTIGPV   34 (292)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCHh
Confidence            5799999999999999999999988753

>COG1255 Uncharacterized protein conserved in archaea [Function unknown]

Probab=86.87  E-value=2.4  Score=29.58  Aligned_cols=66  Identities=18%  Similarity=0.231  Sum_probs=47.5

Q ss_pred             HHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCCCccchHH
Q 023078           10 FLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEP   89 (287)
Q Consensus        10 ~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~   89 (287)
                      .+++.|.++|.+|.+++-+++..               ..++.++.-|+++++  .++-+  ++|+|+.+-.. .+-...
T Consensus        27 ~VA~~L~e~g~dv~atDI~~~~a---------------~~g~~~v~DDitnP~--~~iY~--~A~lIYSiRpp-pEl~~~   86 (129)
T COG1255          27 DVAKRLAERGFDVLATDINEKTA---------------PEGLRFVVDDITNPN--ISIYE--GADLIYSIRPP-PELQSA   86 (129)
T ss_pred             HHHHHHHHcCCcEEEEecccccC---------------cccceEEEccCCCcc--HHHhh--CccceeecCCC-HHHHHH
Confidence            46788899999999999987753               257888999999986  24444  88988865432 344455


Q ss_pred             HHHhCC
Q 023078           90 ILDALP   95 (287)
Q Consensus        90 l~~a~~   95 (287)
                      +++.++
T Consensus        87 ildva~   92 (129)
T COG1255          87 ILDVAK   92 (129)
T ss_pred             HHHHHH
Confidence            666665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	287
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		5e-04

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 111/285 (38%), Gaps = 29/285 (10%)
Query: 7   IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS----SKILHLKGDRKDYD 62
           IG  ++ LL++ G +V           + L    +  F E S    + +  L GD +   
Sbjct: 33  IGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDA 92
Query: 63  FVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCE 119
            V ++ S K  D  Y+           ++ A    N+ +F+Y  +A  Y +K    P   
Sbjct: 93  VVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRL 152
Query: 120 TDTVDP--KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
               +P   S    K   E  LE  G+++ + R   + GP N +     FF RL  G+  
Sbjct: 153 DHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKC 212
Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG-- 235
            +  +         VKDLARA V+ +  +      ++ S    V    L  A  +A    
Sbjct: 213 FVTKA---RRDFVFVKDLARATVRAV--DGVGHGAYHFSSGTDVAIKELYDAVVEAMALP 267
Query: 236 -FPEPELVHYNPKEF------------DFGKKKAFPFRDQVIASL 267
            +PEPE+    P +             DFGK +  P ++ V A++
Sbjct: 268 SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAV 312

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	287
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	4e-22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	7e-22
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-20
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-20
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-19
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-17
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	8e-17
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-16
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	3e-16
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	7e-16
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-15
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-15
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-13
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-13
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-13
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	5e-13
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	7e-13
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	7e-13
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-11
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-11
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	3e-11
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	4e-11
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-11
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	6e-11
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-10
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-10
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-10
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-10
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-09
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-09
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	4e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	8e-09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	4e-08
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	1e-07
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	3e-07
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	4e-05
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	8e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	9e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	7e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 92.6 bits (231), Expect = 4e-22
 Identities = 51/270 (18%), Positives = 86/270 (31%), Gaps = 47/270 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT F+G ++   +  +G+   +       K                E+         D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
              D +         D V  +          I +   N        +          +Y 
Sbjct: 52  TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
           S+   Y     LP  E +   P   +   KL  E +       KG+   +LR  ++YG  
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167

Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              N +   FF +   G  + +  + +   +  + KD A++ +  L  EK S   FNI  
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226

Query: 218 EKYVTFDGLARACAKAAGFPEPELVHYNPK 247
              +T   +A     A G     L+  NP 
Sbjct: 227 GDALTNYEVANTINNAFGNK-DNLLVKNPN 255

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 92.7 bits (231), Expect = 7e-22
 Identities = 45/263 (17%), Positives = 73/263 (27%), Gaps = 43/263 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G   +R +   GH + L  R         P    Q  A    +      +  D+
Sbjct: 20  GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
             ++ +L  +G D V           R   E              A     + + +Y  S
Sbjct: 69  AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
           A         LP  E    D     K      K   +    E    G+      P  + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            L+  P        +  G           V       +  R  +  L   +   + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242

Query: 217 GEKYVTFDGLARACAKAAGFPEP 239
           G   +    L R  A+  G P P
Sbjct: 243 GH-NLEMADLTRRIAELLGQPAP 264

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 85.9 bits (213), Expect = 3e-20
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 41/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G + F+G  L    +  G +VT   R    I  +                L + K D   
Sbjct: 11  GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57

Query: 61  YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
            D V      KG D V    +      D  +  +     +          +F+    AG 
Sbjct: 58  LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115

Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
              +  L   ++  V     P  +  G+     +++ K ++W    P     P       
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                       + +   G        V+D A A +  L + K  ++ F I 
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 87.3 bits (217), Expect = 4e-20
 Identities = 55/266 (20%), Positives = 88/266 (33%), Gaps = 38/266 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G    IG  ++ LL++ G +V     F  G+    + L    +  F         ++G  
Sbjct: 28  GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------------EQFIYC 103
            D+  V   +     D V        D  +   D L N                 +F+Y 
Sbjct: 76  ADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135

Query: 104 SSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYGPLNY 160
            +A  Y +K    P       +P +      K   E  LE  G+++ + R   + GP N 
Sbjct: 136 QTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNV 195

Query: 161 NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220
           +     FF RL  G+   +            VKDLARA V+ +  +      ++ S    
Sbjct: 196 SGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFSSGTD 250

Query: 221 VTFDGLARACAKAAGFPEPELVHYNP 246
           V    L  A  +A   P         
Sbjct: 251 VAIKELYDAVVEAMALPSYPEPEIRE 276

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 85.1 bits (211), Expect = 1e-19
 Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 38/252 (15%)

Query: 3   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
           G   +G+ L+R L  +GH+VT   R   P+   +          ++         +IL  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69

Query: 55  KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
                        ++A +  D  Y ++  E   +   L AL    L+   + SS GVY +
Sbjct: 70  ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115

Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
                  E      K    K  L  E++L     + T LR   IYGP     +      +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 228
            +     P        T   H  D A     ++         +++ ++  + +    L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225

Query: 229 ACAKAAGFPEPE 240
             A   G   P 
Sbjct: 226 WLADRQGIAYPA 237

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 83.5 bits (206), Expect = 2e-19
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 40/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +       GH+VT   R    I Q                I  L+ D  D 
Sbjct: 7   GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
                       +VV D  G   DE E  + +L +L          + +    A    + 
Sbjct: 55  T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEW 166
            D     E+  +     +         LE         +WT + P  ++ P       E 
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164

Query: 167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
                     +     G        ++D A A +  +       + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 84.9 bits (210), Expect = 2e-19
 Identities = 40/276 (14%), Positives = 88/276 (31%), Gaps = 18/276 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F    + I+H  G   D+
Sbjct: 11  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV   +   + +    I+ A+      +  + S  G           
Sbjct: 69  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                  KS  + K      +E++G+ +T +      G   +                + 
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAGFP 237
           I G G         +D+    ++ + + +   +   +      ++ + L     K     
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID-- 236

Query: 238 EPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSV 273
           +     Y P+E         PF   +  ++  +  V
Sbjct: 237 KTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFV 272

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 83.1 bits (205), Expect = 3e-19
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 29/222 (13%)

Query: 2   GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I     + LL      +TL+ R                      ++  ++G  ++
Sbjct: 12  GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
              ++ ++     +VV+        ++  I+ AL   N+ + I  S AG+  +  +    
Sbjct: 64  PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
            T    P S  +G+    +VL    +N+T LR  ++Y        E              
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 217
              + +        + + +A   +L     +   R    +  
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 78.5 bits (194), Expect = 1e-17
 Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 44/229 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P       A        + GD    
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58

Query: 62  DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
             V  ++   G D V  + G   +      + +   N+         ++ + C+SA +  
Sbjct: 59  ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
               +P       D   R         VL   G+ + ++ P      +   P+       
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
                    P   I         DL    ++ L  ++        S + 
Sbjct: 163 YTVTLDGRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 55/288 (19%), Positives = 89/288 (30%), Gaps = 55/288 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K   +V     F  G       L         +  S    ++GD 
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           ++ D   ++    G D V            IN       +PI     N+           
Sbjct: 91  RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
               + F Y +S+  Y     LP  E     P S +   K   E   +      G +   
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++++  +A +   
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261

Query: 204 -GNEKASRQVFNISGEKYVT----FDGLARACAKAAGFPEPELVHYNP 246
                A  QV+NI+     +    F  L    A+       E V+ + 
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDF 309

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 78.0 bits (192), Expect = 8e-17
 Identities = 49/272 (18%), Positives = 94/272 (34%), Gaps = 21/272 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           G T  IG  +    +K G+      R    I    P   ++    + S  ++ L+GD  D
Sbjct: 9   GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
           ++ +  ++  K  D+V    GR   E +  I+ A+      +  + S  G+         
Sbjct: 67  HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117

Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
              D V+P  +  + K +   V+E++GV +T L      G   +                
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAG 235
           + I G G          D+    ++   +     +  +I   K Y+T + +     K  G
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235

Query: 236 FPEPELVHYNPKEFDFGKKKAFPFRDQVIASL 267
             +     Y  +E      +   F    + +L
Sbjct: 236 --KTLEKTYVSEEQVLKDIQESSFPHNYLLAL 265

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 76.1 bits (187), Expect = 3e-16
 Identities = 35/279 (12%), Positives = 85/279 (30%), Gaps = 22/279 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R    ++     +    F +  +K++  +    D+
Sbjct: 11  GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
             +  +L  K  DVV                  +++A     N+++F+            
Sbjct: 68  QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121

Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
                E            K      +E+  + +T +      G      + +   H +  
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
              + I G G          D+    ++ + + +   +   I      ++   + +   +
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238

Query: 233 AAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAF 271
            +     + ++ + ++F    K        V   L   F
Sbjct: 239 LSE-QNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIF 276

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 76.0 bits (188), Expect = 3e-16
 Identities = 47/271 (17%), Positives = 92/271 (33%), Gaps = 55/271 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L  E +++ +    + G     + +        A        +K D 
Sbjct: 8   GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
              D        KG + V+    + + R   E  P      N       LE        +
Sbjct: 53  AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ S++ VY ++ ++P  E     P S +   KL  E+++     +  +     R   +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQV---TQLGHVKDLARAFVQVLGNEKASR 210
            G    +  + ++     +    + I G+G Q        ++ D   A +  L  ++   
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVDAMLFGLRGDERV- 224

Query: 211 QVFNISGEKYVTFDGLARACAKAAGF-PEPE 240
            +FNI  E  +    +A    +  G  P   
Sbjct: 225 NIFNIGSEDQIKVKRIAEIVCEELGLSPRFR 255

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 75.3 bits (186), Expect = 7e-16
 Identities = 59/277 (21%), Positives = 97/277 (35%), Gaps = 52/277 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   LV+ G++V +    + G+    + +        AE          D 
Sbjct: 7   GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           KDY +          DVV+    +   R +   EPI+    N       LE         
Sbjct: 53  KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ SS+ VY  +D++P  E +   P S +   K   E +        GV   ++R   +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167

Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 210
            GP   + V   F  +L+     + + G G Q     +V+D   A +          A  
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
              N+     V    +A+  A+  G      +   P 
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGLRPE--IRLVPS 262

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 75.2 bits (184), Expect = 1e-15
 Identities = 51/282 (18%), Positives = 87/282 (30%), Gaps = 54/282 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           G T  IG  L+ +L          +V    R   P   +               I +++ 
Sbjct: 8   GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55

Query: 57  DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
           D  D D  ++ LS        F V +     E +  E        +LDA+    PNL+  
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
              +    Y         ++S   P+ E             L     E V + +G+ W+ 
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 199
            RP  I+G   Y+ +       + A      G+ +   G            D   +A   
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPEL 241
           +    +  A  + FN+S      +    +  A+  G    E 
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEY 277

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 71.8 bits (176), Expect = 5e-15
 Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 34/222 (15%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I   + ++L  K+  + TLF R  A I +  P           +    + GD  +
Sbjct: 30  GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
           +  +K ++  +G D+VY     E  +++   ++ A+   ++++ I+  S G+Y +     
Sbjct: 79  HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
               + V      K        +E+ G+ +T LRP +    L    + ++        R 
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 217
            P  G+ +        K +A     ++   EK   +   I+ 
Sbjct: 188 EPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 68.4 bits (167), Expect = 1e-13
 Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           +    LSR L  +G ++   +R           +  +      ++ L   G+    D V 
Sbjct: 15  YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65

Query: 66  SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             L +     G D V    G +      I           Y S+  VY   D     ET 
Sbjct: 66  HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119

Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
            + P + R + ++   +       +     R   IYGP    P       +L  G    I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP 239
                QV    HV+D+A+     +        V+N+  ++ V    +    A+  G P P
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVCDDEPVPPQDVIAYAAELQGLPLP 231

Query: 240 ELVHYNPKE 248
             V ++  +
Sbjct: 232 PAVDFDKAD 240

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 53/232 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +  +L   L  +GH+     R +     +L      +          +  + ++ 
Sbjct: 28  GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76

Query: 62  DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
                  S      D V    G        +            +       +++FI  SS
Sbjct: 77  -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131

Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
            G     D  P      ++ +     K   +  L+   +++T +RP              
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPG------------- 171

Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              +    G+ + +     ++T+     D+A+   +++  +    + F +  
Sbjct: 172 PLSNEESTGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 68.0 bits (166), Expect = 3e-13
 Identities = 43/275 (15%), Positives = 102/275 (37%), Gaps = 19/275 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG F+ R  +   H   ++ R   P +     +  +EF      I  ++G+ +++
Sbjct: 11  GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
           + + S L  K  D+V   +          I++A+    N+++F+         +   LP 
Sbjct: 69  EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125

Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
                   +S  + K      +E+  + +T +             +             I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177

Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKAAGF 236
            I G+G     L + +D+A+  ++V  + +   ++      K  ++ + L       +  
Sbjct: 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS-G 236

Query: 237 PEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAF 271
              + VH   ++     ++    ++  ++ L + F
Sbjct: 237 LSFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIF 271

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 39/279 (13%), Positives = 84/279 (30%), Gaps = 55/279 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +  IG  L   L ++  +  +       IA  +         +F      +  D  + 
Sbjct: 6   GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51

Query: 62  DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
           D +  ++     D ++                   +N    +    IL+A     +E+ +
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
             S+ GV+          + T+  P++     K+  E + +      G++  SLR   I 
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168

Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 209
                            F+            +  +   + ++ D  +A V +   ++   
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228

Query: 210 --RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP 246
             R  +N++     T   L     +     E E   Y  
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIPEFEIE---YKE 263

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 66.9 bits (163), Expect = 5e-13
 Identities = 45/279 (16%), Positives = 101/279 (36%), Gaps = 35/279 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT +IG  + +  +K GH   +FTR    K  +  +            S   + +KG+ 
Sbjct: 18  GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67

Query: 59  KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
            +++ +   +  K  DVV   +   +  +   IL+A+    N+++F+         + + 
Sbjct: 68  DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           LP         ++  + K      +E   + +T +                +        
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAK 232
             I + G+G     + + +D+    ++V  + +A  +  ++  S    +T   L  +  +
Sbjct: 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELI-SRWE 231

Query: 233 AAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAF 271
                + + +H   +E     K+     +  IA L   F
Sbjct: 232 KKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLF 270

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 65.4 bits (160), Expect = 7e-13
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L + L    +Q+    R K     Q                  +K    D 
Sbjct: 7   GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50

Query: 62  DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
           D+    ++    G D + +++G     +  + L     L         ++FI  S+    
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFF 168
           L+ +       D +     +  K   +  L +   +++T ++P  +              
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE------------ 155

Query: 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
                     +     +V+    + D+A    +++  + +  +V ++ +G+
Sbjct: 156 -----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 66.9 bits (164), Expect = 7e-13
 Identities = 46/285 (16%), Positives = 87/285 (30%), Gaps = 55/285 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K    V     F+ G       L         E  S+   ++GD 
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           +D    +  +  KG D V            I        +PI     N+           
Sbjct: 89  RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
               + F Y +S+  Y     LP  E +  +P S     ++  ++  +    + G     
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++ ++ +  +   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259

Query: 204 -GNEKASRQVFNISGEKYVT----FDGLARACAKAAGFPEPELVH 243
              + A   ++N++     T       +           +  + +
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKY 304

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 63.9 bits (155), Expect = 3e-12
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 42/233 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +     + GH+V    R     A    G +                 ++  
Sbjct: 7   GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53

Query: 62  DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
              ++ L     D V D               D    ++  L   +        SA + +
Sbjct: 54  VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111

Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
                P          S+             + +  +  VNW  + P   +         
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
               +       +        +       ++A A +  L +  A R    +  
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 50/268 (18%), Positives = 84/268 (31%), Gaps = 43/268 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG   +G  L    + +GH++ +   F  GK    + LP  +     E         G  
Sbjct: 27  GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
            D   ++ +  +     V        D  +   DA  N        +        + +  
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
            +A  Y +   +P        P + +   K   E+ L    V   SLR   + GP   + 
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
             P    F+ RLKAG+          V     + D        L   + +  VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247

Query: 219 KYVTFDGLARACAKAAGFPEPELVHYNP 246
            +   + +        G    E V    
Sbjct: 248 GHSIKE-VFDVVLDYVGATLAEPVPVVA 274

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 45/281 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +             +G   +
Sbjct: 12  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62

Query: 61  YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
                  +    +G  + +     +  DE+     + DA      ++ +IY S       
Sbjct: 63  ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112

Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              +P        P       K   E+ +   G+  T +            P   +    
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMEL 169

Query: 171 LKAGR---PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDG 225
           +  G      P       +  L    D+  A +Q+  +  +K +     ++ E  ++   
Sbjct: 170 MPDGTFEWHAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQ 227

Query: 226 LARACAKAAGFPEPELVHYNPKEFD-FGKKKAFPFRDQVIA 265
           +  A ++A        V Y               +R+Q+ A
Sbjct: 228 VCAAFSRALNRR----VTYVQVPKVEIKVNIPVGYREQLEA 264

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 51/295 (17%), Positives = 87/295 (29%), Gaps = 74/295 (25%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           GG  F+G  L + L++ G +QV     L +  K  +        D     F       + 
Sbjct: 39  GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85

Query: 57  DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
              D   + S      +D V+      A          +P+ D   N        E+   
Sbjct: 86  SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139

Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
                  +Y ++     +        T+  D  S H         K+  E       +  
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 188
            +     R   +YGP        W              F ++   G P+P+   G+    
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH 243
              V+D+A   +     +     V+NI+  K  +   LA    +  G    EL  
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITG-NNTELDR 312

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 62.1 bits (151), Expect = 4e-11
 Identities = 56/328 (17%), Positives = 95/328 (28%), Gaps = 92/328 (28%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
           GG  + G   +  L K+ ++V +     R        L    P  S  +       +   
Sbjct: 18  GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77

Query: 54  ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
                 GD  D++F+  S  +   D V          Y +  R       +     N   
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 97  ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
               L            +   + G Y      P+ + +       H G+ +T        
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189

Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
                SK              G+  T L    +YG               L+Y+ V    
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 167 ---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYV 221
              F  +   G P+ + G G Q      ++D  +     + N   + +  VFN   E++ 
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309

Query: 222 TFDGLARACAKAA---GFPEPELVHYNP 246
             + LA    KA    G    ++   NP
Sbjct: 310 VNE-LASLVTKAGSKLGLDVKKMTVPNP 336

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 61.6 bits (149), Expect = 4e-11
 Identities = 39/275 (14%), Positives = 85/275 (30%), Gaps = 28/275 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG F++   +       +  R           +  +   +  + I  + G   + 
Sbjct: 17  GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
           + ++  L     D+V    G E+   +  ++ A           + G    +L S+    
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121

Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
            + +  DP       ++ K     ++E  G+ +T +    I     YN +       L  
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
                I G G          D+ +  ++ + + +   +  +       +  + LA    K
Sbjct: 180 TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEK 239

Query: 233 AAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASL 267
             G   P       ++              V+A+ 
Sbjct: 240 KIGRTLP--RVTVTEDDLLAAAGENIIPQSVVAAF 272

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 61.0 bits (149), Expect = 6e-11
 Identities = 65/284 (22%), Positives = 103/284 (36%), Gaps = 60/284 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L+  G +V +      GK    + +P         F       + D 
Sbjct: 7   GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           +D + V+ +        V       + + + E +P+LD   N       LE        +
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
            ++ S+ G +Y    +     ET    PKS +   K   E  L       G+ W SLR  
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171

Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 202
            +YGP   +P  E      F  R+  G P+ +     PG    V    +V D+A A    
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP 246
           L    +   ++N+   +  T   +  A A+AAG      V   P
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAP 269

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 33/270 (12%), Positives = 66/270 (24%), Gaps = 65/270 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  + + L +           R  A   +++ GE+D              GD  
Sbjct: 11  GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
           D D +  +   +G D +  +                                        
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 96  -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
                   ++  +   S G       L       +        K   E  L   G  +T 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
           +R   +                L  G+   +  +  +        D+A   +Q L  E+A
Sbjct: 172 IRAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEA 221

Query: 209 SRQVFNISGEKYVT---FDGLARACAKAAG 235
             + F++  +   T           ++   
Sbjct: 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 48/288 (16%), Positives = 97/288 (33%), Gaps = 56/288 (19%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
           GG  F+G  L+    +     +V +   F         +       +    F  +++   
Sbjct: 17  GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74

Query: 56  GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
            D  +   ++  L    FD ++      +    +     L    N +             
Sbjct: 75  ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130

Query: 99  -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
            + IY SSAGVY  +   P+       P++ + G  KL  +  +   S       LR  Y
Sbjct: 131 AKVIYASSAGVYGNTKA-PNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186

Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
             +YGP          +         A + + +   G Q    V    +++D+ +A V+ 
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKA 242

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
           +  +K+   V+N+   +  +++ +     +  G  +      NP  F 
Sbjct: 243 MKAQKS--GVYNVGYSQARSYNEIVSILKEHLGDFKVT-YIKNPYAFF 287

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 41/293 (13%), Positives = 73/293 (24%), Gaps = 67/293 (22%)

Query: 2   GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
           G    +G  L++ LVK+G        + TL    +        G       +        
Sbjct: 21  GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
             D       +  L     DV++    I   EA E++       NL+             
Sbjct: 70  AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127

Query: 99  -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
                  + ++ SS  V+      P  +     P +     K     E +L         
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK--AICELLLSDYSRRGFF 185

Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
           +   +R   I             +             G+   +P            +   
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAV 242

Query: 197 RAFVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNP 246
              +        +   R+  ++ G    T      A  K AG     L+   P
Sbjct: 243 GFLIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAGEKAVALIRREP 294

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 45/284 (15%), Positives = 78/284 (27%), Gaps = 57/284 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 56  FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQV---TQLGHVKDLARAFVQVLGN 205
           YGP      +   V      +L  G  P    GS           +V D+A   +  L  
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFL-- 225

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF 249
           E     +FN+   +  +F  +A A        + E +   P + 
Sbjct: 226 ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIP-FPDKL 268

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 45/278 (16%), Positives = 82/278 (29%), Gaps = 71/278 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  L+R LV  G +VT    L      P                      L+  
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58

Query: 58  RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
               +  +  L      +VY                    +++                 
Sbjct: 59  V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109

Query: 90  ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-----KG 143
                  + + +  S+  VY ++D LP  E   + P+S +   K+  E V  +       
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163

Query: 144 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
                +R   +YGP    + +       L     +P+ G G Q     ++ D+    V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 240
               +    V N    + ++ + + R     +   E  
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSPAAEVA 259

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 32/165 (19%), Positives = 50/165 (30%), Gaps = 22/165 (13%)

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 158 FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV 217

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQVLG 204
           YGP      +   V      +L  G  P    GS       V    +V D+A   +  L 
Sbjct: 218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWFL- 272

Query: 205 NEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF 249
            E     +FN+   +  +F  +A A        + E +   P + 
Sbjct: 273 -ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIP-FPDKL 315

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 54/253 (21%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G    IG  L++ L K  G +  +     +    +    P                   +
Sbjct: 9   GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53

Query: 58  RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
             D++ ++  +       +Y    +    A E  P      N+               ++
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
             + SS  V+  +    +    T+  P + + G  K   E   E      GV+  S+R  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171

Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---G 204
            +                  F++  A +      S      + ++ D   A + ++    
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231

Query: 205 NEKASRQVFNISG 217
            +      +N++ 
Sbjct: 232 EKIKIHSSYNLAA 244

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 32/187 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV----YLKSDL 114
           DY+  +S   A  G   +  I+G   D    I+     ++       AGV    Y     
Sbjct: 53  DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKA---ARDAGVKHIAYT-G-- 106

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
               E   +     H     TE  + +  + +T LR         Y    V E      +
Sbjct: 107 YAFAEESIIPLAHVHLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTE 157

Query: 173 AGRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
           +G  +   GSG    +         +LA A   VL  E    + +N+   +  TFD LA+
Sbjct: 158 SGAIVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ 211

Query: 229 ACAKAAG 235
             ++ +G
Sbjct: 212 ILSEVSG 218

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 36/231 (15%), Positives = 75/231 (32%), Gaps = 37/231 (16%)

Query: 11  LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
            ++ +        +  R    +     G+      +             DY   +S + A
Sbjct: 17  TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62

Query: 71  -KGFDVVYDINGREADEVEPILDALPNLEQFIY-CSSAGV----YLKSDLLPHCETDTVD 124
            KG D V  I              +P +E  +Y    +GV    ++        + +   
Sbjct: 63  FKGMDTVVFIPSIIHPSF----KRIPEVENLVYAAKQSGVAHIIFI-G--YYADQHNNPF 115

Query: 125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 184
             S + G      +L + G+++T +R         Y    + +   L     +  P    
Sbjct: 116 HMSPYFGY--ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDG 167

Query: 185 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 235
           ++       D+AR  + ++ N     + + +SG  Y     LA   ++A+G
Sbjct: 168 RIN-YITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASG 216

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 49/284 (17%), Positives = 90/284 (31%), Gaps = 56/284 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G   FI   ++R L  EGH V     +    + + +      EF            D + 
Sbjct: 36  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            +        +G D V+    D+ G    +    +    N                ++F 
Sbjct: 84  MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141

Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
           Y SSA +Y +   L               +P+      KL TE +     +  G+     
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201

Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           R   IYGP   +    E     F  +   +     + G G+Q      + +     +++ 
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
             +   R+  NI  ++ V+ + +A           P  +H+ P 
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPG 301

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.1 bits (125), Expect = 4e-08
 Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 40/248 (16%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F  K+       +
Sbjct: 25  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83

Query: 60  DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
            +D         +    A+GF  V  D   + A+  +         + F   SS G    
Sbjct: 84  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 171
           S+ L            + KG++    V E K   ++  RP  +      +   EW   + 
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA 231
                +P   +         V  + RA +  +   +           + +    +     
Sbjct: 188 --FGSLPDSWASGHSV---PVVTVVRAMLNNVVRPRD-------KQMELLENKAIHD-LG 234

Query: 232 KAAGFPEP 239
           KA G  +P
Sbjct: 235 KAHGSLKP 242

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 53/284 (18%), Positives = 94/284 (33%), Gaps = 59/284 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
           GGT   G  ++R L+++G  +V + TR  +   A++L   G      AE       ++GD
Sbjct: 12  GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59

Query: 58  RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
           + D   ++ +L   G    + +     +  +  EV+    + D      L   +Y     
Sbjct: 60  QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117

Query: 108 VYLKSD---LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
           +   +       H +           GK   E      GV  TS+R    +     N + 
Sbjct: 118 IKKLTAGRLAAAHFD-----------GKGEVEEYFRDIGVPMTSVRLPCYF----ENLLS 162

Query: 165 EWFFHRLKAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEK 219
            +   +   G+     +P     +       V DL    + +L   EK   Q   +S   
Sbjct: 163 HFLPQKAPDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC- 218

Query: 220 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV 263
             T +  A    K         VH      +  +K  FP    +
Sbjct: 219 RHTAEEYAALLTKHTRKV----VHDAKMTPEDYEKLGFPGARDL 258

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 33/186 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDIN----GREADEVEPILDALPNLEQFIYCSSAGV----YL 110
           DY    +  SA +G + +  I+    G+ A +   +++A           +AGV    Y 
Sbjct: 52  DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINA---------AKAAGVKFIAYT 102

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            S  L H +T  +     H     TE +L   G+ +T LR  +      Y+         
Sbjct: 103 -S--LLHADTSPLGLADEHIE---TEKMLADSGIVYTLLRNGW------YSENYLASAPA 150

Query: 171 LKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                      G G          D A A  +V+       +V+ ++G+   T   LA  
Sbjct: 151 ALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAE 208

Query: 230 CAKAAG 235
             K +G
Sbjct: 209 LTKQSG 214

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 56/230 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G T   G  L   ++ E    +V    R       +L                       
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64

Query: 60  DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
             D          K + S + F  V +D+                    ++  S+ G   
Sbjct: 65  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGA-- 117

Query: 111 KSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
                        D KS     R KG+L  +++ E      T  RP  ++GP       E
Sbjct: 118 -------------DAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLFGP------RE 157

Query: 166 WFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            F        PI   +PG    +       DLARA  ++   E    +  
Sbjct: 158 EFRLAEILAAPIARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 43/264 (16%), Positives = 72/264 (27%), Gaps = 53/264 (20%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
           G   F+G  L   L     H +    R             ++E      K   I+HL G 
Sbjct: 7   GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
                        +        N      ++ +LD L     +  I  SS+         
Sbjct: 57  N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA------ 97

Query: 116 PHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LNYNPVEEWF 167
                      + + + KL  E +L    E  G      R   ++G     NYN V   F
Sbjct: 98  --------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATF 149

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGL 226
            +++     I +         L +V D+     + + G       V  +     VT   +
Sbjct: 150 CYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208

Query: 227 ARACAKAAGFPEPELVHYNPKEFD 250
                K         +      F+
Sbjct: 209 VDLLYKFKQSRLDRTLPKLDNLFE 232

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L    H+V L           +   + +   E       +  D  D 
Sbjct: 9   GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
             V   +  K  D +  +       VE P  D L           E        + ++ S
Sbjct: 55  QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
           S                    P S +   K   E +         +   ++R    +   
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169

Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
            +   +  W           R    P  G  V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 154 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204
           +YG   +   ++    WF  +         +P  I G+G QV  + H +D+   +   L 
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254

Query: 205 NEKASR-QVFNISG 217
           N    R   FNI G
Sbjct: 255 NVSKIRGNAFNIGG 268

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 35/287 (12%), Positives = 65/287 (22%), Gaps = 78/287 (27%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L      + L            P +      E       ++ D  D 
Sbjct: 10  GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
           + V + +   G D +       +       ++        + +A       + ++ SS  
Sbjct: 56  NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113

Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
                             P   + G  K   E++     +  G     +R       P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
           Y  +  WF H                        D       V         V   +   
Sbjct: 173 YRMLSTWFSHD-----------------------DFVSLIEAVFRAPVLGCPVVWGASAN 209

Query: 220 YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIAS 266
                    +     G        + PK+       A  FR  +  +
Sbjct: 210 --DAGWWDNSHLGFLG--------WKPKD------NAEAFRRHITET 240

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGESDQEFAEFSSKILHLKG 56
           G    +G  L+  L   GH+V    R +    ++   P     +  + +  ++HL G
Sbjct: 154 GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	287
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.96
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.83
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.82
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.82
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.82
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.8
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.78
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.77
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.77
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.77
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.76
1spx_A	278	Short-chain reductase family member (5L265); paral	99.76
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.76
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.75
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.75
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.75
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.75
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.75
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.74
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.74
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.74
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.74
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.74
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.74
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.73
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.73
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.73
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.72
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.72
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.72
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.72
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.72
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.72
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.72
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.72
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.72
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.72
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.71
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.71
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.71
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.71
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.71
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.71
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.71
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.71
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.7
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.7
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.7
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.7
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.7
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.7
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.7
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.7
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.7
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.7
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.7
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.69
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.69
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.69
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.69
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.69
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.69
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.69
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.69
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.68
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.68
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.68
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.68
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.68
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.68
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.68
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.68
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.68
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.68
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.67
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.67
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.67
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.67
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.67
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.67
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.67
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.67
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.67
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.67
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.67
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.67
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.67
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.67
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.67
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.67
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.67
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.67
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.67
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.67
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.67
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.66
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.66
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.66
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.66
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.66
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.66
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.66
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.66
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.66
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.66
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.66
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.65
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.65
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.65
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.65
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.65
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.65
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.65
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.64
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.64
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.64
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.64
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.64
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.64
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.64
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.64
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.64
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.64
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.64
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.64
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.63
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.63
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.63
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.63
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.63
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.62
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.62
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.62
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.62
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.62
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.62
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.62
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.62
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.61
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.61
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.61
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.61
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.6
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.6
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.6
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.6
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.6
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.6
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.59
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.59
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.59
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.59
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.59
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.58
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.58
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.58
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.58
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.58
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.58
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.57
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.57
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.57
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.57
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.57
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.57
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.56
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.56
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.56
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.56
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.56
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.55
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.55
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.55
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.54
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.54
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.53
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.53
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.52
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.52
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.52
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.51
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.51
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.5
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.49
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.49
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.48
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.48
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.47
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.46
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.46
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.45
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.43
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.41
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.41
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.4
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.39
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.39
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.39
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.38
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.36
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.36
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.34
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.34
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.32
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.3
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.24
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.22
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.15
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.1
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.98
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.97
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.93
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.91
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.83
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.77
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.66
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.59
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.56
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.52
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.4
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.39
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.36
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.35
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.26
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.1
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.02
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.01
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.97
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.96
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.72
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.7
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.67
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.6
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.58
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.58
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.56
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.56
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.53
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.49
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.47
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.4
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.18
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.15
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.09
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	96.97
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.95
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.85
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.78
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.78
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.75
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.68
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.66
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.58
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.39
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.37
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.34
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.34
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.32
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.24
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.2
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.2
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.19
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.19
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.16
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.15
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.12
1lnq_A	336	MTHK channels, potassium channel related protein;	96.02
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	95.98
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	95.94
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.8
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	95.8
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.6
3gms_A	340	Putative NADPH:quinone reductase; structural genom	95.49
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.04
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.03
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.0
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	94.99
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	94.89
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	94.86
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	94.77
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	94.7
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	94.69
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	94.66
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.61
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	94.57
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	94.54
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	94.52
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.49
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.47
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.45
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.44
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.19
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.18
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	94.13
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.04
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.0
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	93.92
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	93.8
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.76
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	93.75
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	93.72
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	93.67
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	93.62
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	93.51
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	93.47
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.46
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	93.46
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	93.4
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	93.31
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	93.27
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	93.2
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	93.19
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.15
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	93.01
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	92.99
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	92.99
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	92.97
4g65_A	461	TRK system potassium uptake protein TRKA; structur	92.97
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	92.89
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	92.82
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	92.82
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	92.81
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.8
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	92.71
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	92.71
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	92.66
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	92.53
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	92.42
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	92.41
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	92.39
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	92.37
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	92.32
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	92.32
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	92.24
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	92.22
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	92.16
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	92.14
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	92.13
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	92.1
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	92.08
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	92.06
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	92.05
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	92.05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	92.04
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	91.96
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	91.91
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	91.88
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	91.7
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	91.63
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	91.62
4ezb_A	317	Uncharacterized conserved protein; structural geno	91.61
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	91.59
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	91.53
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	91.46
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	91.37
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	91.27
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	91.19
3qha_A	296	Putative oxidoreductase; seattle structural genomi	91.15
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	91.11
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	91.1
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	91.07
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	91.03
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	90.94
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	90.93
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	90.91
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	90.9
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	90.87
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	90.78
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	90.75
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	90.73
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	90.72
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	90.64
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	90.54
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	90.51
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	90.32
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	90.29
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	90.28
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	90.21
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	90.13
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	90.13
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	90.06
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	90.01
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	90.0
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	89.91
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	89.87
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	89.87
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	89.87
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	89.84
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	89.78
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	89.69
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	89.67
2duw_A	145	Putative COA-binding protein; ligand binding prote	89.66
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	89.66
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	89.63
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	89.59
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	89.58
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	89.56
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	89.53
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	89.52
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	89.51
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	89.46
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	89.45
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	89.42
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	89.38
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	89.37
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	89.36
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	89.35

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=9.4e-40  Score=273.78  Aligned_cols=253  Identities=21%  Similarity=0.253  Sum_probs=213.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|++.. .. +            .+++++.+|++ .+.+.++++  ++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence            7999999999999999999999999998333 21 2            27899999999 999999998  999999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh----
Q 023078           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----  141 (287)
Q Consensus        81 ~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~----  141 (287)
                      +..            ..++.+++++++  +++||||+||.++|+.....+++|+.+..|.+.| .+|.++|+++++    
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  150 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK  150 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            863            335788999987  8899999999999998777788999999998888 999999998854    


Q ss_pred             cCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCc
Q 023078          142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~  220 (287)
                      .+++++++||+++|||.... .++..++..+..+.++.+++++++.++++|++|+|++++.+++++. .+++||++++++
T Consensus       151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            79999999999999997643 5677788888899988888888999999999999999999999876 678999999999


Q ss_pred             ccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          221 VTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       221 ~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +|+.|+++.+.+.+|.+. .+...+....        .......+|++|++++|||+|..
T Consensus       230 ~s~~e~~~~i~~~~g~~~-~~~~~~~~~~--------~~~~~~~~d~~k~~~~lG~~p~~  280 (311)
T 3m2p_A          230 LTNYEVANTINNAFGNKD-NLLVKNPNAN--------EGIHSSYMDSSKAKELLDFSTDY  280 (311)
T ss_dssp             ECHHHHHHHHHHHTTCTT-CEEECSSSBC--------CSCCCBCBCCHHHHHHSCCCCSC
T ss_pred             ccHHHHHHHHHHHhCCCC-cceecCCCCC--------CCcCceecCHHHHHHHhCCCccc
Confidence            999999999999999876 4454443210        00111278999999999999984

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2e-40  Score=282.49  Aligned_cols=267  Identities=18%  Similarity=0.194  Sum_probs=214.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-----hcCCcEEEEecCCChHHHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~d~   75 (287)
                      ||||||||++|++.|+++|++|++++|+.......+.     .+..     ...+++++.+|+.|.+.+.++++  ++|+
T Consensus        31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~  103 (351)
T 3ruf_A           31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLD-----EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDH  103 (351)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHH-----HHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhh-----hhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCE
Confidence            7999999999999999999999999997654221110     0000     01689999999999999999998  9999


Q ss_pred             EEEccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHH
Q 023078           76 VYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        76 vi~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      |||+|+..                ..++.+++++++  ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  183 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE  183 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence            99999862                345778899987  8899999999999998877889999999998888 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC-C
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E  206 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~-~  206 (287)
                      ++++    +.+++++++||+++|||+...     .++..++..+..+.++.+++++++.++|+|++|+|++++.+++. +
T Consensus       184 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~  263 (351)
T 3ruf_A          184 IYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD  263 (351)
T ss_dssp             HHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence            9875    459999999999999997532     46677888888888888888889999999999999999999987 3


Q ss_pred             cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ...+++||+++++++|+.|+++.+.+.+|.+. .+...+.......     +..... .+|++|++++|||+|..
T Consensus       264 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~p~~  332 (351)
T 3ruf_A          264 SAKDNIYNVAVGDRTTLNELSGYIYDELNLIH-HIDKLSIKYREFR-----SGDVRHSQADVTKAIDLLKYRPNI  332 (351)
T ss_dssp             GGCSEEEEESCSCCEEHHHHHHHHHHHHHTTC-CC-----EEECCC-----TTCCSBCCBCCHHHHHHHCCCCCC
T ss_pred             ccCCCEEEeCCCCcccHHHHHHHHHHHhCccc-ccccccccccCCC-----CCccceeeeCHHHHHHHhCCCCCC
Confidence            45788999999999999999999999999843 1111111110000     111112 78999999999999974

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3e-39  Score=270.85  Aligned_cols=260  Identities=21%  Similarity=0.247  Sum_probs=207.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+........           ..+++++.+|+.|.+ +.++++  + |+|||+|
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A   70 (312)
T 3ko8_A            6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA   70 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence            799999999999999999999999999876533322           367899999999998 888887  5 9999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +..                ..++.+++++++  ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|.+++ 
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            852                335678888887  8899999999999998877788999888888888 99999999875 


Q ss_pred             ---hcCCcEEEEccCceecCCCCCchhHHHHHHHHcC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcC---CcCCCceE
Q 023078          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF  213 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~---~~~~~~~~  213 (287)
                         +.+++++++||+++|||+....++..++..+..+ ..+.+++++++.++++|++|+|++++.++++   ....+++|
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence               3599999999999999987666666777777666 4566778888999999999999999999987   44467899


Q ss_pred             EeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       214 ~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      |+++++++|+.|+++.+.+.+|.+. .+...+.......    ++..... .+|++|++++|||+|..
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~----~~~~~~~~~~d~~k~~~~lG~~p~~  293 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRP-EIRLVPSTPDGRG----WPGDVKYMTLAVTKLMKLTGWRPTM  293 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCC-EEEEC--------------CCCSEECBCCHHHHHHHCCCCSS
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCC-ceeecCccccccC----CCCCccccccCHHHHHHHhCCCCCC
Confidence            9999999999999999999999875 5555443221100    1111122 78999999999999974

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=9.6e-39  Score=271.52  Aligned_cols=263  Identities=15%  Similarity=0.198  Sum_probs=213.2

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|++.|+++|  ++|++++|.... ....+..      .....+++++.+|++|.+.+.++++..++|+||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi  103 (346)
T 4egb_A           30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKS------IQDHPNYYFVKGEIQNGELLEHVIKERDVQVIV  103 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred             ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhh------hccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999998  778888876532 1111110      011358999999999999999999844599999


Q ss_pred             EccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecC-CCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~-~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      |+|+..                ..++.+++++++  ++++|||+||.++|+.. ...+++|+.+..|.+.| .+|..+|.
T Consensus       104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  183 (346)
T 4egb_A          104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM  183 (346)
T ss_dssp             ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence            999863                234788899987  88999999999999976 45678999998998888 99999999


Q ss_pred             HHHh----cCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCce
Q 023078          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (287)
Q Consensus       138 ~~~~----~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~  212 (287)
                      +++.    .+++++++||+++|||+.. ..++..++..+..++++.+++++++.++++|++|+|++++.+++++. .+++
T Consensus       184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  262 (346)
T 4egb_A          184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV  262 (346)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence            8854    6999999999999999753 35677788888999888888888999999999999999999998766 6789


Q ss_pred             EEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       213 ~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ||+++++++|+.|+++.+.+.+|.+.+.+...+....          .... .+|++|++++|||+|..
T Consensus       263 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~~d~~k~~~~lG~~p~~  321 (346)
T 4egb_A          263 YNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLG----------HDRRYAINAEKMKNEFDWEPKY  321 (346)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--C----------CCSCCCBCCHHHHHHHCCCCCC
T ss_pred             EEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCC----------CcceeeccHHHHHHHcCCCCCC
Confidence            9999999999999999999999987643333322110          1111 68999999999999984

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.4e-39  Score=275.70  Aligned_cols=264  Identities=17%  Similarity=0.227  Sum_probs=209.6

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC-ChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++ |++|++++|+..+......          ..+++++.+|++ |.+.+.++++  ++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih   97 (372)
T 3slg_A           30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP   97 (372)
T ss_dssp             ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence            799999999999999998 9999999998766332221          368999999999 9999999998  8999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCC-------CCCccc-cch
Q 023078           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-------~p~~~~-~~k  132 (287)
                      +|+..                ..++.+++++++  + ++|||+||.++||.....+++|+...       .|.+.| .+|
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            99863                345788999987  7 99999999999998777677777654       466667 999


Q ss_pred             HHHHHHHHhc---CCcEEEEccCceecCCCC---------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       133 ~~~E~~~~~~---~~~~~ilr~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .++|++++..   +++++++||+++|||++.         ..++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus       177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            9999998765   899999999999999753         3356778888888888888888889999999999999999


Q ss_pred             HHhcCCc--CCCceEEeeCC-CcccHHHHHHHHHHHhCCCCCe--------EEEcCCCCcCCCCccccccccccccchhh
Q 023078          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKAAGFPEPE--------LVHYNPKEFDFGKKKAFPFRDQVIASLKT  269 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~-~~~s~~~i~~~i~~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  269 (287)
                      .+++++.  ..+++||++++ +++|+.|+++.+.+.+|.+.+.        +.......+  .... ........+|++|
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~d~~k  333 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAY--YGNG-YQDVQNRVPKIEN  333 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC----------------CCCCBCCHH
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecccccc--ccCC-ccccceeecCHHH
Confidence            9999865  46889999994 7899999999999999976421        111110000  0000 0001112789999


Q ss_pred             Hhhhhcccccc
Q 023078          270 AFSVNMVKRSM  280 (287)
Q Consensus       270 ~~~~lg~~p~~  280 (287)
                      ++++|||+|..
T Consensus       334 ~~~~lG~~p~~  344 (372)
T 3slg_A          334 TMQELGWAPQF  344 (372)
T ss_dssp             HHHHHTCCCCC
T ss_pred             HHHHcCCCCCC
Confidence            99999999974

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=9.9e-39  Score=271.56  Aligned_cols=248  Identities=19%  Similarity=0.246  Sum_probs=210.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|++..                 .+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence            7999999999999999999999999998654                 367889999999999999998  999999999


Q ss_pred             CCC--------------ccchHHHHHhCC--CCCcEEEEeeeeEeec--CCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~--~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +..              ..++.+++++++  ++++|||+||.++||.  ....+++|+.+..|.+.| .+|..+|++++ 
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            863              335788899886  8899999999999997  556678899888888888 99999999885 


Q ss_pred             ---hcCCcEEEEccCcee-------------cCCCC------------CchhHHHHHHHHcCCCcccCCCCCceeee---
Q 023078          141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL---  189 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  189 (287)
                         +.+++++++||+++|             ||++.            ..++..++.....+.++.+++++++.++|   
T Consensus       166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  245 (347)
T 4id9_A          166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH  245 (347)
T ss_dssp             HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred             HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence               468999999999999             87532            34566677788888887777788888899   


Q ss_pred             -eeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchh
Q 023078          190 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLK  268 (287)
Q Consensus       190 -i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (287)
                       +|++|+|++++.+++++...+++||+++++++|+.|+++.+.+.+|.+. .+...+....            ...+|++
T Consensus       246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~~------------~~~~d~~  312 (347)
T 4id9_A          246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPI-VTVDFPGDGV------------YYHTSNE  312 (347)
T ss_dssp             EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCE-EEEECSSCCC------------BCCBCCH
T ss_pred             cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCC-ceeeCCCccc------------ccccCHH
Confidence             9999999999999998755688999999999999999999999999875 4444433221            1268999


Q ss_pred             hHhhhhcccccc
Q 023078          269 TAFSVNMVKRSM  280 (287)
Q Consensus       269 k~~~~lg~~p~~  280 (287)
                      |++++|||+|..
T Consensus       313 k~~~~lG~~p~~  324 (347)
T 4id9_A          313 RIRNTLGFEAEW  324 (347)
T ss_dssp             HHHHHHCCCCCC
T ss_pred             HHHHHhCCCCCC
Confidence            999999999974

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-38  Score=263.87  Aligned_cols=255  Identities=19%  Similarity=0.225  Sum_probs=202.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++| .++++++........+           ..+++++.+|+++ +.+.++++  ++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a   71 (313)
T 3ehe_A            7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA   71 (313)
T ss_dssp             ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence            7999999999999999999 5555655443322222           3578999999999 88899998  999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +..                ..++.+++++++  ++++|||+||.++||.....+.+|+.+..|.+.| .+|..+|.+++ 
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            852                235777888876  8899999999999998877788898888888888 99999999874 


Q ss_pred             ---hcCCcEEEEccCceecCCCCCchhHHHHHHHHcC-CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEee
Q 023078          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~  216 (287)
                         +.+++++++||+++|||++...++..++..+..+ .++.+++++++.++|+|++|+|++++.+++. ...+++||++
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~ni~  230 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DERVNIFNIG  230 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSSEEEEECC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCCCceEEEC
Confidence               4699999999999999987666676777776666 5566778889999999999999999999984 3367899999


Q ss_pred             CCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccc-cccchhhHhhhhcccccc
Q 023078          217 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       217 ~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~lg~~p~~  280 (287)
                      +++++|+.|+++.+.+.+|.+. .+...+....       ++.... ..+|++|++ +|||+|..
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~-------~~~~~~~~~~d~~k~~-~lG~~p~~  286 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLSP-RFRFTGGDRG-------WKGDVPVMLLSIEKLK-RLGWKPRY  286 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCC-EEEEC-------------------CCBCCHHHH-HHTCCCSC
T ss_pred             CCCCeeHHHHHHHHHHHhCCCC-ceEECCCccC-------CccccceeccCHHHHH-HcCCCCCC
Confidence            9999999999999999999875 5544332111       011111 278999995 59999975

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-37  Score=265.54  Aligned_cols=263  Identities=16%  Similarity=0.169  Sum_probs=208.0

Q ss_pred             CCcccchHHHHHHHHHH--CCCeEEEEecCCccccc--cCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~--~g~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~   75 (287)
                      ||||||||++|++.|++  +|++|++++|+......  ...............+++++.+|++|.+.+.++ ..  ++|+
T Consensus        16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~   93 (362)
T 3sxp_A           16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY   93 (362)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence            79999999999999999  89999999997652100  000000001111135789999999999999988 55  9999


Q ss_pred             EEEccCCC--------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      |||+|+..              ..++.+++++++  +++ |||+||.++||.... +.+|+.+..|.+.| .+|..+|.+
T Consensus        94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~  171 (362)
T 3sxp_A           94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF  171 (362)
T ss_dssp             EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence            99999853              345788899887  665 999999999997766 88999999999988 999999999


Q ss_pred             HHhcC--CcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          139 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       139 ~~~~~--~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      ++...  ++++++||+++|||+...     .++..++..+..+.++.+++++++.++++|++|+|++++.+++.+. .| 
T Consensus       172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g-  249 (362)
T 3sxp_A          172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG-  249 (362)
T ss_dssp             HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE-
T ss_pred             HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC-
Confidence            97654  889999999999998642     5667788888888888887888899999999999999999998865 45 


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccc-cccchhhHhhhhcccccc
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~lg~~p~~  280 (287)
                      +||++++.++|+.|+++.+.+.+| +. .+...+...         +.... ..+|++|++++|||+|..
T Consensus       250 ~~~i~~~~~~s~~e~~~~i~~~~g-~~-~~~~~~~~~---------~~~~~~~~~d~~k~~~~lG~~p~~  308 (362)
T 3sxp_A          250 VYNVGYSQARSYNEIVSILKEHLG-DF-KVTYIKNPY---------AFFQKHTQAHIEPTILDLDYTPLY  308 (362)
T ss_dssp             EEEESCSCEEEHHHHHHHHHHHHC-CC-EEECCC----------------CCCCBCCHHHHHHHCCCCCC
T ss_pred             EEEeCCCCCccHHHHHHHHHHHcC-CC-ceEECCCCC---------cCcccceecCHHHHHHHhCCCCCC
Confidence            999999999999999999999999 54 554443320         01111 278999999999999974

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-37  Score=263.11  Aligned_cols=264  Identities=18%  Similarity=0.166  Sum_probs=206.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhh-hhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||+++++.|+++|++|++++|+........     ..+. ....+++++.+|++|.+.+.++++..++|+|||+
T Consensus        11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A           11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-----ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-----HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-----HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            799999999999999999999999999866532111     0111 1135789999999999999999987789999999


Q ss_pred             cCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH
Q 023078           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~  140 (287)
                      |+..                ..++.+++++++  ++++||++||.++||.....+++|+.+..|.+.| .+|..+|.+++
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  165 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR  165 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                235677888876  7889999999999998777788999888888888 99999999885


Q ss_pred             h----c-CCcEEEEccCceecCCCC-----------CchhHHHHHHHHcC-CCcccCC------CCCceeeeeeHHHHHH
Q 023078          141 S----K-GVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR  197 (287)
Q Consensus       141 ~----~-~~~~~ilr~~~v~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~Dva~  197 (287)
                      .    . +++++++||+++|||...           ..+.+.+....... .++.+++      ++++.++|+|++|+|+
T Consensus       166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~  245 (341)
T 3enk_A          166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR  245 (341)
T ss_dssp             HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence            3    3 499999999999999531           33444444433332 3454455      7788999999999999


Q ss_pred             HHHHHhcC--CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhh
Q 023078          198 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVN  274 (287)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~l  274 (287)
                      +++.++++  ....+++||+++++++|+.|+++.+.+.+|.+. .+...+....          .... .+|++|++++|
T Consensus       246 a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~----------~~~~~~~d~~k~~~~l  314 (341)
T 3enk_A          246 GHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV-PYELVARRPG----------DVAECYANPAAAAETI  314 (341)
T ss_dssp             HHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC-CEEEECCCTT----------CCSEECBCCHHHHHHH
T ss_pred             HHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc-ceeeCCCCCC----------CccccccCHHHHHHHc
Confidence            99999886  234678999999999999999999999999876 3443332211          1112 78999999999


Q ss_pred             cccccc
Q 023078          275 MVKRSM  280 (287)
Q Consensus       275 g~~p~~  280 (287)
                      ||+|..
T Consensus       315 G~~p~~  320 (341)
T 3enk_A          315 GWKAER  320 (341)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999964

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=4.7e-37  Score=261.73  Aligned_cols=267  Identities=19%  Similarity=0.176  Sum_probs=208.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++|++|++++|+.....+.+.. ....+.. ...+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~  109 (352)
T 1sb8_A           33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDE-VRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ  109 (352)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH-HHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHH-HhhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence            79999999999999999999999999976431111100 0000000 02578999999999999999998  99999999


Q ss_pred             cCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH
Q 023078           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~  140 (287)
                      |+..                ..++.+++++++  ++++||++||.++|+.....+++|+.+..|.+.| .+|..+|.+++
T Consensus       110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  189 (352)
T 1sb8_A          110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD  189 (352)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                235678888876  7899999999999998766678888888888888 99999999874


Q ss_pred             ----hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC-cCCC
Q 023078          141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR  210 (287)
Q Consensus       141 ----~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~~~~  210 (287)
                          +.+++++++||+++|||....     .++..++..+..+.++.+++++++.++|+|++|+|++++.++... ...+
T Consensus       190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~  269 (352)
T 1sb8_A          190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN  269 (352)
T ss_dssp             HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred             HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence                358999999999999997532     345667777777887766788889999999999999999988763 3467


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHh---CCCCCeE-EEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAA---GFPEPEL-VHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ++||+++++++|+.|+++.+.+.+   |.+.+.. ...+..          +..... .+|++|++++|||+|..
T Consensus       270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~  334 (352)
T 1sb8_A          270 QVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFR----------EGDVRHSLADISKAAKLLGYAPKY  334 (352)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCC----------TTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred             ceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCC----------ccchhhccCCHHHHHHHhCCCCCC
Confidence            899999999999999999999999   8775321 111100          001112 78999999999999964

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=8.7e-37  Score=257.80  Aligned_cols=259  Identities=17%  Similarity=0.252  Sum_probs=203.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.....+.+           ..+++++.+|+.|.+.+.++++..++|+|||+|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            799999999999999999999999999765432222           137889999999999999998766899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +..                ..++.+++++++  ++++||++||.++|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            864                235677888876  7889999999999997766778898888888888 999999998753


Q ss_pred             ----cCCcEEEEccCceecCCCC----------CchhHHHHHHHHc-CCCcccCC------CCCceeeeeeHHHHHHHHH
Q 023078          142 ----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       142 ----~~~~~~ilr~~~v~g~~~~----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~Dva~~~~  200 (287)
                          .+++++++||+++|||+..          ..+++.+...... +..+.+++      ++++.++|+|++|+|++++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence                5899999999999999621          2344555544433 23454444      5678899999999999999


Q ss_pred             HHhcCCcC--CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccc
Q 023078          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKR  278 (287)
Q Consensus       201 ~~~~~~~~--~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  278 (287)
                      .+++++..  .+++||+++++++|+.|+++.+.+.+|.+.+ +...+...   +.      .....+|++|++++|||+|
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~---~~------~~~~~~d~~k~~~~lG~~p  305 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIP-AEVAPRRA---GD------PARLVASSQKAKEKLGWDP  305 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC-EEEECCCS---SC------CSEECBCCHHHHHHHCCCC
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc-eeeCCCCC---Cc------ccccccCHHHHHHHhCCCC
Confidence            99876432  3689999999999999999999999998763 33333211   00      0112789999999999999


Q ss_pred             cc
Q 023078          279 SM  280 (287)
Q Consensus       279 ~~  280 (287)
                      ..
T Consensus       306 ~~  307 (330)
T 2c20_A          306 RY  307 (330)
T ss_dssp             SC
T ss_pred             cc
Confidence            74

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=8.2e-37  Score=256.99  Aligned_cols=255  Identities=18%  Similarity=0.156  Sum_probs=204.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+... ..              .+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            7999999999999999999999999998654 11              16788999999999999999843499999999


Q ss_pred             CCCc----------------cchHHHHHhCC---CCCcEEEEeeeeEeecC--CCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           81 GREA----------------DEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~--~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      +...                .++.+++++++   ++++||++||.++|+..  ...+++|+.+..|.+.| .+|.++|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            8642                24677888875   48999999999999876  55678888888888888 999999998


Q ss_pred             HHh----cCCcEEEEccCceecCCCCC-chhHHHHHHHHc---C--CCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       139 ~~~----~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      ++.    .+++++++||+++|||+... .++..++..+..   +  .++..+++++..++++|++|+|++++.+++++. 
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  241 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-  241 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-
Confidence            854    48999999999999998643 345556665555   6  455566777889999999999999999998753 


Q ss_pred             CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccc-cccchhhHhhhhcccccc
Q 023078          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       209 ~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~lg~~p~~  280 (287)
                      .+++||++++..+|+.|+++.+.+.+|.+. .+...+... +       +.... ..+|++|++++|||+|..
T Consensus       242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~-~-------~~~~~~~~~d~~k~~~~lG~~p~~  305 (321)
T 2pk3_A          242 TGDVYNVCSGIGTRIQDVLDLLLAMANVKI-DTELNPLQL-R-------PSEVPTLIGSNKRLKDSTGWKPRI  305 (321)
T ss_dssp             TTCEEEESCSCEEEHHHHHHHHHHHSSSCC-EEEECGGGC-C-------SSCCSBCCBCCHHHHHHHCCCCCS
T ss_pred             CCCeEEeCCCCCeeHHHHHHHHHHHhCCCC-ceeeccccC-C-------CcccchhccCHHHHHHHcCCCcCC
Confidence            578999999999999999999999999875 444433110 0       11111 278999999999999974

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1e-36  Score=261.96  Aligned_cols=256  Identities=18%  Similarity=0.244  Sum_probs=197.6

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++| ++|++++|+.......+..         ..+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~---------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~  106 (377)
T 2q1s_A           38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVRFSETSITDDALLASLQD--EYDYVFHL  106 (377)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC---------CTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred             ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC---------CCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence            7999999999999999999 9999999986553222210         3578999999999999999998  99999999


Q ss_pred             cCCC----------------ccchHHHHHhCC---CCCcEEEEeeeeEeecCCCCCCC--CCC---CC-CCCccc-cchH
Q 023078           80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL  133 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~--e~~---~~-~p~~~~-~~k~  133 (287)
                      |+..                ..++.+++++++   ++++||++||.++||.....+++  |+.   +. .|.+.| .+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            9864                235778888876   46899999999999976655666  766   54 666777 9999


Q ss_pred             HHHHHHHh----cCCcEEEEccCceecCCC---------C-----CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       134 ~~E~~~~~----~~~~~~ilr~~~v~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      .+|.+++.    .+++++++||+++|||..         .     ..++..++..+..+.++.+++++++.++++|++|+
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  266 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV  266 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence            99998853    589999999999999976         2     34567778888888887777888899999999999


Q ss_pred             HHH-HHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccc--ccccchhhHhh
Q 023078          196 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRD--QVIASLKTAFS  272 (287)
Q Consensus       196 a~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~k~~~  272 (287)
                      |++ ++.+++++. .+ +||+++++++|++|+++.+.+.+|.+. .+...+..          +...  ...+|++|+++
T Consensus       267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~----------~~~~~~~~~~d~~k~~~  333 (377)
T 2q1s_A          267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNT-ELDRLPKR----------PWDNSGKRFGSPEKARR  333 (377)
T ss_dssp             HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCS-CCCCCCCC----------GGGCC-CCCCCCHHHHH
T ss_pred             HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCC-CceeCCCC----------ccccccccccCHHHHHH
Confidence            999 999998765 56 999999999999999999999999864 22222211          0111  12789999999


Q ss_pred             hhcccccc
Q 023078          273 VNMVKRSM  280 (287)
Q Consensus       273 ~lg~~p~~  280 (287)
                      +|||+|..
T Consensus       334 ~lG~~p~~  341 (377)
T 2q1s_A          334 ELGFSADV  341 (377)
T ss_dssp             HHCCCCCC
T ss_pred             HcCCCCCC
Confidence            99999963

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.2e-36  Score=256.04  Aligned_cols=261  Identities=18%  Similarity=0.259  Sum_probs=207.6

Q ss_pred             CCcccchHHHHHHHHHHC---C---CeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g---~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      ||||||||++|++.|+++   |   ++|++++|+.... ...+.     .+. ...+++++.+|++|.+.+.+++.  ++
T Consensus         6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~   77 (337)
T 1r6d_A            6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-----PVD-ADPRLRFVHGDIRDAGLLARELR--GV   77 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-----GGT-TCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-----hcc-cCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence            799999999999999997   8   9999999975321 11110     000 12578999999999999999997  99


Q ss_pred             cEEEEccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        74 d~vi~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      |+|||+|+..                ..++.++++++.  ++++|||+||.++||.....+++|+.+..|.+.| .+|..
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence            9999999863                235778888876  7889999999999987655678888887888878 99999


Q ss_pred             HHHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       135 ~E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      +|.+++    +.+++++++||+++|||... ..++..++..+..+.++.+++++++.++++|++|+|++++.+++++. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            999874    35899999999999999754 34566677777888877777888889999999999999999987654 5


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +++||++++.++|+.|+++.+.+.+|.+.+.+...+...          ..... .+|++|++++|||+|..
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~  298 (337)
T 1r6d_A          237 GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRK----------GHDLRYSLDGGKIERELGYRPQV  298 (337)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCT----------TCCCBCCBCCHHHHHHHCCCCCS
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCC----------CCcceeecCHHHHHHHcCCCCCC
Confidence            789999999999999999999999998754343322110          01111 57999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=7.2e-37  Score=256.24  Aligned_cols=255  Identities=22%  Similarity=0.241  Sum_probs=202.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||+++++.|+++|++|++++|........+           ..+++++.+|++|.+.+.++++..++|+|||++
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            799999999999999999999999998543322222           146788999999999999988755799999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeee-eEeec-CCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~-~~y~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +..                ..++.+++++++  ++++||++||. .+||. ....+.+|+.+..|.+.| .+|.++|.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            863                234677888876  78899999999 88986 444567888777787778 9999999987


Q ss_pred             H----hcCCcEEEEccCceecCCCCC----chhHHHHHHHHcCCCcccC-----CCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          140 E----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       140 ~----~~~~~~~ilr~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      +    +.+++++++||+++|||++..    .++..++..+.++.++.++     +++.+.++|+|++|+|++++.+++.+
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            4    468999999999999997532    3456677777777776655     77788899999999999999998764


Q ss_pred             cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                         +++||++++.++|++|+++.+.+.+|.+. .+...+....   .      .....+|++|+++ |||+|..
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~---~------~~~~~~d~~k~~~-lg~~p~~  294 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAP-EVQPAPPRPG---D------LERSVLSPLKLMA-HGWRPKV  294 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCC-CEEEECCCTT---C------CSBCCBCCHHHHT-TTCCCSS
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCC-CceeCCCCcc---c------hhhccCCHHHHHH-CCCCCCC
Confidence               68999999999999999999999999876 3443332210   0      0112789999999 9999864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=3.3e-37  Score=255.31  Aligned_cols=239  Identities=20%  Similarity=0.189  Sum_probs=198.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      || +||||++|++.|+++|++|++++|+.+..               ..+++++.+|+.|.+.+.++++. ++|+|||+|
T Consensus         9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a   71 (286)
T 3gpi_A            9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-RPEILVYCV   71 (286)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-CCSEEEECH
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-CCCEEEEeC
Confidence            68 59999999999999999999999986652               25788999999999999999882 399999998


Q ss_pred             CC-----------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcE
Q 023078           81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (287)
Q Consensus        81 ~~-----------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~  146 (287)
                      +.           |..++.+++++++  ++++|||+||.++||.....+++|+.+..|.+.| .+|.++|++ .+. +++
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~  149 (286)
T 3gpi_A           72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSS  149 (286)
T ss_dssp             HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence            75           4567899999987  7899999999999998877788999999998888 999999999 777 999


Q ss_pred             EEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCcccHH
Q 023078          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTFD  224 (287)
Q Consensus       147 ~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~~s~~  224 (287)
                      +++||+++|||+..     .++..+.+ ..  ..++++..++++|++|+|++++.+++++  ...+++||+++++++|+.
T Consensus       150 ~ilR~~~v~G~~~~-----~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          150 TILRFSGIYGPGRL-----RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             EEEEECEEEBTTBC-----HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             EEEecccccCCCch-----hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHH
Confidence            99999999999743     23444444 22  2367788999999999999999999874  346789999999999999


Q ss_pred             HHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          225 GLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       225 ~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      |+++.+.+.+|.+.+. .. ++           .......+|++|++ +|||+|..
T Consensus       222 e~~~~i~~~~g~~~~~-~~-~~-----------~~~~~~~~d~~k~~-~lG~~p~~  263 (286)
T 3gpi_A          222 DLLRWLADRQGIAYPA-GA-TP-----------PVQGNKKLSNARLL-ASGYQLIY  263 (286)
T ss_dssp             HHHHHHHHHTTCCCCC-SC-CC-----------CBCSSCEECCHHHH-HTTCCCSS
T ss_pred             HHHHHHHHHcCCCCCC-CC-Cc-----------ccCCCeEeeHHHHH-HcCCCCcC
Confidence            9999999999987522 11 11           00111278999998 89999986

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=257.70  Aligned_cols=264  Identities=18%  Similarity=0.163  Sum_probs=204.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++|++++|+......       ..+..  ...+++++.+|++|.+.+.++++..++|+|||
T Consensus        20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            7999999999999999999999999998654110       00000  13478899999999999999998545799999


Q ss_pred             ccCCCc----------------cchHHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           79 INGREA----------------DEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        79 ~a~~~~----------------~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      +|+...                .++.+++++++  ++ ++||++||.++|+.....+++|+.+..|.+.| .+|.++|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            998632                24677888877  65 89999999999998766678898888888888 999999998


Q ss_pred             HHh----cCCcEEEEccCceecCCCCCch----hHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       139 ~~~----~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      ++.    .+++++++||+++|||+....+    +..++..+..+.. ...++++++.++|+|++|+|++++.+++++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            753    4899999999999999754333    3445556666653 3345778899999999999999999998764  


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +++||+++++++|+.|+++.+.+.+|.+.+....++....       .+..... .+|++|++++|||+|..
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~d~~k~~~~lG~~p~~  315 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNPAKAQRVLGWKPRT  315 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCTHHHHHHHCCCCCS
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccc-------CCCcchhhcCCHHHHHHhcCCCcCC
Confidence            3799999999999999999999999986421122221111       1111112 67999999999999974

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2.1e-37  Score=256.44  Aligned_cols=251  Identities=18%  Similarity=0.198  Sum_probs=196.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||| ||||++|++.|+++|++|++++|++.+.....           ..+++++.+|+.|.+     ++  ++|+|||++
T Consensus        11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a   71 (286)
T 3ius_A           11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST   71 (286)
T ss_dssp             ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence            698 99999999999999999999999876532111           257999999999854     55  899999999


Q ss_pred             CCCcc---chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc-CCcEEEEcc
Q 023078           81 GREAD---EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP  151 (287)
Q Consensus        81 ~~~~~---~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~-~~~~~ilr~  151 (287)
                      +....   .+.+++++++    ++++|||+||.++||.....+++|+.+..|.+.| .+|+.+|+++++. +++++++||
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp  151 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL  151 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence            87533   3566777754    6799999999999998877788999999999888 9999999999887 999999999


Q ss_pred             CceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHH
Q 023078          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~  231 (287)
                      +++||+++..      +..+..+....+.++ ++.++|+|++|+|++++.+++++. .+++||+++++++|+.|+++.+.
T Consensus       152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~  223 (286)
T 3ius_A          152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA  223 (286)
T ss_dssp             CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred             cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence            9999997432      123345555555444 578899999999999999999876 67899999999999999999999


Q ss_pred             HHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          232 KAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +.+|.+.+.....+...  .+.....-......+|++|++++|||+|..
T Consensus       224 ~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  270 (286)
T 3ius_A          224 ELQGLPLPPAVDFDKAD--LTPMARSFYSENKRVRNDRIKEELGVRLKY  270 (286)
T ss_dssp             HHHTCCCCCEEEGGGSC--CCHHHHHTTSCCCEECCHHHHHTTCCCCSC
T ss_pred             HHcCCCCCcccchhhhc--cChhHHHhhcCCceeehHHHHHHhCCCCCc
Confidence            99998865433332221  111000000011278999999999999985

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=5.3e-36  Score=253.59  Aligned_cols=262  Identities=21%  Similarity=0.222  Sum_probs=204.2

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|++.|+++|  ++|++++|.... ..+.+..     +. ...+++++.+|++|.+.+.+++.  ++|+||
T Consensus         9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (336)
T 2hun_A            9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD-----LE-DDPRYTFVKGDVADYELVKELVR--KVDGVV   80 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh-----hc-cCCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence            7999999999999999986  899999997521 1111110     00 03578999999999999999997  999999


Q ss_pred             EccCCC----------------ccchHHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      |+|+..                ..++.++++++.  +. ++||++||.++||.....+++|+.+..|.+.| .+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            999863                234677888876  43 79999999999987655678888887788878 99999999


Q ss_pred             HHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCce
Q 023078          138 VLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (287)
Q Consensus       138 ~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~  212 (287)
                      +++    +.+++++++||+++|||... ..++..++..+..+..+.+++++.+.++++|++|+|++++.++++.. .+++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            875    36899999999999999754 34566677777888877777788889999999999999999987644 6789


Q ss_pred             EEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       213 ~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ||++++.++|+.|+++.+.+.+|.+.+.+...+...   +.      .....+|++|++++|||+|..
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~------~~~~~~d~~k~~~~lG~~p~~  298 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRP---GH------DLRYSLDSWKITRDLKWRPKY  298 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCT---TC------CCCCCBCCHHHHHHHCCCCSS
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCC---Cc------hhhhcCCHHHHHHHhCCCCCC
Confidence            999999999999999999999998764444332110   00      011167999999999999964

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=5e-36  Score=254.95  Aligned_cols=259  Identities=16%  Similarity=0.167  Sum_probs=204.9

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|++.|+++  |++|++++|+.... ...+.     .+.  ..+++++.+|++|.+.+.++++  ++|+||
T Consensus        10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-----~~~--~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (348)
T 1oc2_A           10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-----AIL--GDRVELVVGDIADAELVDKLAA--KADAIV   80 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-----GGC--SSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-----hhc--cCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence            799999999999999998  89999999975321 11111     000  2578999999999999999998  889999


Q ss_pred             EccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCC------------CCCCCCCCCCCCc
Q 023078           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPKS  127 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~------------~~~~e~~~~~p~~  127 (287)
                      |+|+..                ..++.++++++.  ++ +|||+||.++||....            .+++|+.+..|.+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            999864                234778888876  66 9999999999986432            4678887777877


Q ss_pred             cc-cchHHHHHHHHh----cCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          128 RH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       128 ~~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      .| .+|..+|.+++.    .+++++++||+.+|||... ..++..++..+..+.++.+++++.+.++++|++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            78 999999998753    5899999999999999764 34566677777777777666788889999999999999999


Q ss_pred             HhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +++++. .+++||++++.++|+.|+++.+.+.+|.+.+.+...+..          +..... .+|++|++++|||+|..
T Consensus       240 ~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~  308 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR----------AGHDLRYAIDASKLRDELGWTPQF  308 (348)
T ss_dssp             HHHHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC----------TTCCCBCCBCCHHHHHHHCCCCSC
T ss_pred             HhhCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCC----------CCcccccccCHHHHHHHcCCCCCC
Confidence            987653 678999999999999999999999999875433322211          001111 68999999999999974

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-36  Score=252.36  Aligned_cols=241  Identities=14%  Similarity=0.118  Sum_probs=200.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||+++++.|+++|++|++++|.                          ++|+.|.+.+.++++..++|+|||+|
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A           11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999992                          36889999999999855799999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +...                .++.+++++++  ++ ||||+||.++|+.....+++|+.+..|.+.| .+|..+|++++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            8642                34678888887  66 7999999999998877889999999998888 999999999998


Q ss_pred             cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcc
Q 023078          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~  221 (287)
                      .+.+++++||+++|||+. ..++..++.....+.++.++++  +.++++|++|+|+++..+++++.  +++||+++++++
T Consensus       144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            888999999999999975 3466777777777887776654  78999999999999999999866  679999999999


Q ss_pred             cHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       222 s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      |+.|+++.+.+.+|.+. .+...+...+...     ...... .+|++|++ +|||+|..
T Consensus       219 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~-~lg~~p~~  271 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMKV-NVLPVSTEEFGAA-----AARPKYSIFQHNMLR-LNGFLQMP  271 (287)
T ss_dssp             EHHHHHHHHHHHHTCCC-EEEEECHHHHCCS-----SCCCSBCCBCCHHHH-HTTCCCCC
T ss_pred             cHHHHHHHHHHHcCCCc-ceeeeehhhcCcc-----cCCCCcccccHHHHH-hhCCCCCc
Confidence            99999999999999875 6655543321111     011112 78999999 89999864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.1e-36  Score=256.88  Aligned_cols=266  Identities=18%  Similarity=0.209  Sum_probs=201.0

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||+++++.|+++ |++|++++|+..+......          ..+++++.+|++| .+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih   73 (345)
T 2bll_A            6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (345)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence            799999999999999998 8999999998766432222          3578999999998 467888888  8999999


Q ss_pred             ccCCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCC-------CCCccc-cch
Q 023078           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-------~p~~~~-~~k  132 (287)
                      +|+...                .++.+++++++  + ++|||+||.++||.....+++|+.+.       .|.+.| .+|
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK  152 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHH
Confidence            998632                24677888876  6 89999999999997665566776543       234457 899


Q ss_pred             HHHHHHHH----hcCCcEEEEccCceecCCCC---------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       133 ~~~E~~~~----~~~~~~~ilr~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      ..+|.+++    +.+++++++||+++|||+..         ..++..++..+..+.++.+++++++.++++|++|+|+++
T Consensus       153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  232 (345)
T 2bll_A          153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence            99999874    45899999999999999753         234566777777888777777788899999999999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC-cccHHHHHHHHHHHhCCCCCeEEEcCCCCcC--CCCccccc---cccc-cccchhhH
Q 023078          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFP---FRDQ-VIASLKTA  270 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~-~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~---~~~~-~~~~~~k~  270 (287)
                      +.+++++.  ..+++||+++++ ++|+.|+++.+.+.+|.+.+. ...+.....  .....+..   .... ..+|++|+
T Consensus       233 ~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (345)
T 2bll_A          233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR-HHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA  311 (345)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG-GGSCCCCCEEEC------------CCCCCBCCHHH
T ss_pred             HHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCccc-ccCccccccccccchhhccccccchhhhcccHHHH
Confidence            99998754  357899999986 899999999999999976422 112211100  00000000   0011 27899999


Q ss_pred             hhhhcccccc
Q 023078          271 FSVNMVKRSM  280 (287)
Q Consensus       271 ~~~lg~~p~~  280 (287)
                      +++|||+|..
T Consensus       312 ~~~lG~~p~~  321 (345)
T 2bll_A          312 HRCLDWEPKI  321 (345)
T ss_dssp             HHHHCCCCCC
T ss_pred             HHhcCCCccc
Confidence            9999999964

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=9.4e-36  Score=253.26  Aligned_cols=269  Identities=20%  Similarity=0.208  Sum_probs=202.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccccc--CCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ--LPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|++.|+++|++|++++|+.......  .. .....+.. ...+++++.+|++|.+.+.++++..++|+||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   86 (348)
T 1ek6_A            8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLP-ESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVI   86 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSB-HHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccH-HHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            79999999999999999999999999865430000  00 00001111 1357899999999999999998755799999


Q ss_pred             EccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-cchHHHHH
Q 023078           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTES  137 (287)
Q Consensus        78 ~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-~~k~~~E~  137 (287)
                      |+|+..                ..++.+++++++  ++++||++||.++||.....+++|+.+..| .+.| .+|..+|.
T Consensus        87 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~  166 (348)
T 1ek6_A           87 HFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEE  166 (348)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             ECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHH
Confidence            999864                234677888876  788999999999999776677888887777 6667 99999999


Q ss_pred             HHHhc---C--CcEEEEccCceecCCC-----------CCchhHHHHHHHH-cCCCcccCC------CCCceeeeeeHHH
Q 023078          138 VLESK---G--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKD  194 (287)
Q Consensus       138 ~~~~~---~--~~~~ilr~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D  194 (287)
                      +++..   +  ++++++||+++|||..           ...+++.+..... .+..+.+++      ++++.++|+|++|
T Consensus       167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D  246 (348)
T 1ek6_A          167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD  246 (348)
T ss_dssp             HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred             HHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHH
Confidence            87532   4  9999999999999842           1335566666665 555555544      5678899999999


Q ss_pred             HHHHHHHHhcCCc-CCC-ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhh
Q 023078          195 LARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFS  272 (287)
Q Consensus       195 va~~~~~~~~~~~-~~~-~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  272 (287)
                      +|++++.+++++. ..+ ++||+++++++|+.|+++.+.+.+|.+.+ +...+...   +.      .....+|++|+++
T Consensus       247 va~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~---~~------~~~~~~d~~k~~~  316 (348)
T 1ek6_A          247 LAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP-YKVVARRE---GD------VAACYANPSLAQE  316 (348)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC-EEEECCCT---TC------CSEECBCCHHHHH
T ss_pred             HHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc-eeeCCCCC---cc------chhhccCHHHHHH
Confidence            9999999987642 233 79999999999999999999999998763 33333211   00      0112789999999


Q ss_pred             hhcccccc
Q 023078          273 VNMVKRSM  280 (287)
Q Consensus       273 ~lg~~p~~  280 (287)
                      +|||+|..
T Consensus       317 ~lG~~p~~  324 (348)
T 1ek6_A          317 ELGWTAAL  324 (348)
T ss_dssp             TTCCCCCC
T ss_pred             hcCCCCCC
Confidence            99999864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.8e-37  Score=256.50  Aligned_cols=248  Identities=17%  Similarity=0.165  Sum_probs=197.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|+      +....                ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A           12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            79999999999999999998      21111                124455679999999999999855699999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC----CCCCCcc-c-cchHHH
Q 023078           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKLNT  135 (287)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~----~~~p~~~-~-~~k~~~  135 (287)
                      +...                 .++.+++++++  ++++|||+||.++||.....+++|+.    +..|.+. | .+|..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  149 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI  149 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence            8732                 34678899987  88999999999999987777888886    6666663 6 999999


Q ss_pred             HHHHH----hcCCcEEEEccCceecCCCC-----CchhHHHHHH----HHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       136 E~~~~----~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      |++++    +.+++++++||+++|||++.     ..+++.++..    +..+.++.+++++++.++|+|++|+|++++.+
T Consensus       150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  229 (319)
T 4b8w_A          150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV  229 (319)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence            99874    46999999999999999753     2355556665    77888888888899999999999999999999


Q ss_pred             hcCCc-CCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          203 LGNEK-ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       203 ~~~~~-~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++++. ..+++||+++++++|+.|+++.+.+.+|.+. .+...+.....         .....+|++|++++|||+|..
T Consensus       230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~---------~~~~~~d~~k~~~~lg~~p~~  298 (319)
T 4b8w_A          230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG-EVTFDTTKSDG---------QFKKTASNSKLRTYLPDFRFT  298 (319)
T ss_dssp             HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS-CEEEETTSCCC---------CSCCCBCCHHHHHHCTTCCCC
T ss_pred             HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC-cEEeCCCCCcC---------cccccCCHHHHHHhcCCCCCC
Confidence            98743 3567999999999999999999999999876 44443322110         011168999999999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=6.1e-36  Score=257.21  Aligned_cols=254  Identities=19%  Similarity=0.205  Sum_probs=202.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+........           ..+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  101 (379)
T 2c5a_A           35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA  101 (379)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence            799999999999999999999999999865522110           2578999999999999999998  999999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCC-----CCCCCCC--CCCCCccc-cchH
Q 023078           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL  133 (287)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~-----~~~~e~~--~~~p~~~~-~~k~  133 (287)
                      +...                 .++.+++++++  ++++|||+||.++|+....     .+++|+.  +..|.+.| .+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            8532                 23567888876  7889999999999985322     2355654  45566677 9999


Q ss_pred             HHHHHHH----hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      .+|.+++    +.+++++++||+++|||....     .++..++..+..+.+ +.+++++++.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            9999874    458999999999999997532     256667777766665 666788888999999999999999999


Q ss_pred             cCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +++  .+++||+++++++|+.|+++.+.+.+|.+. .+...+...   +       .....+|++|++++|||+|..
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~---~-------~~~~~~d~~k~~~~lG~~p~~  325 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGPE---G-------VRGRNSDNNLIKEKLGWAPNM  325 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCCC---C-------CSBCEECCHHHHHHHSCCCCC
T ss_pred             hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCC-ceeeCCCCC---C-------cccccCCHHHHHHHhCCCCCC
Confidence            875  467999999999999999999999999875 444444321   0       011268999999999999973

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.6e-36  Score=253.82  Aligned_cols=247  Identities=20%  Similarity=0.277  Sum_probs=199.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc---ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      ||||||||++|++.|+++|++|++++|+...   ....+..     + ....+++++.+|+.            ++|+||
T Consensus        13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~-~~~~~~~~~~~Dl~------------~~d~vi   74 (321)
T 3vps_A           13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK-----F-LEKPVLELEERDLS------------DVRLVY   74 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE-----E-ECSCGGGCCHHHHT------------TEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh-----h-ccCCCeeEEeCccc------------cCCEEE
Confidence            7999999999999999999999999998762   1111110     0 00134555555554            789999


Q ss_pred             EccCCC---------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           78 DINGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        78 ~~a~~~---------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      |+++..               ..++.+++++++  ++++|||+||.++|+.....+++|+.+..|.+.| .+|..+|.++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999863               235678889887  8899999999999998877789999998998888 9999999988


Q ss_pred             Hh----cCC-cEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceE
Q 023078          140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       140 ~~----~~~-~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~  213 (287)
                      +.    .++ +++++||+++|||+.. ..++..++..+..++++.+++++++.++++|++|+|++++.+++++.. + +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence            54    688 9999999999999854 356777888888888888778889999999999999999999998764 6 99


Q ss_pred             EeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccc
Q 023078          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKR  278 (287)
Q Consensus       214 ~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  278 (287)
                      |+++++++|+.|+++.+. .+|.+. .+...+.....         .....+|++|++++|||+|
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~-~~~~~~~~~~~---------~~~~~~d~~k~~~~lG~~p  286 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAA-EVARKQPRPNE---------ITEFRADTALQTRQIGERS  286 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTC-EEEEECCCTTC---------CSBCCBCCHHHHHHHCCCS
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCC-ccccCCCCCCC---------cceeeccHHHHHHHhCCCC
Confidence            999999999999999999 999876 55544433210         0112789999999999999

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=9.8e-36  Score=254.02  Aligned_cols=263  Identities=14%  Similarity=0.143  Sum_probs=202.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+........      .......+++++.+|+.+.+.+.++++..++|+|||+|
T Consensus        15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A           15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhh------HhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            799999999999999999999999999865522110      00001357899999999999999999844589999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CCcEEEEeeeeEeecCCC-CCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~-~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +..                ..++.++++++.  + +++|||+||.++||.... .+.+|+.+..|.+.| .+|..+|.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            852                334677888876  4 889999999999987543 356777777777778 9999999987


Q ss_pred             Hhc-------------CCcEEEEccCceecCCCC--CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       140 ~~~-------------~~~~~ilr~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      +..             +++++++||+++|||++.  ..++..++..+.++.++.+. ++++.++|+|++|+|++++.+++
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence            532             899999999999999753  35677788888888876654 56788999999999999999887


Q ss_pred             C----CcCCCceEEeeCC--CcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccc-cccchhhHhhhhccc
Q 023078          205 N----EKASRQVFNISGE--KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSVNMVK  277 (287)
Q Consensus       205 ~----~~~~~~~~~~~~~--~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~lg~~  277 (287)
                      +    +...+++||++++  +++|+.|+++.+.+.+|.+. .+...+..  +       +.... ..+|++|++++|||+
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~--~-------~~~~~~~~~d~~k~~~~lG~~  317 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA-SWQLDGNA--H-------PHEAHYLKLDCSKAKMQLGWH  317 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC-CEEC----------------CCCCCCBCCHHHHHHHCCC
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC-ccccCCCC--C-------CcCcccccCCHHHHHHHhCCC
Confidence            4    2235679999974  57999999999999999875 33211110  0       11111 278999999999999


Q ss_pred             ccc
Q 023078          278 RSM  280 (287)
Q Consensus       278 p~~  280 (287)
                      |..
T Consensus       318 p~~  320 (357)
T 1rkx_A          318 PRW  320 (357)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            964

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.9e-36  Score=253.09  Aligned_cols=257  Identities=16%  Similarity=0.153  Sum_probs=197.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|++.+.. .+.          ..+++++.+|++|.+.+.++++  ++|+|||++
T Consensus        19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a   85 (342)
T 2x4g_A           19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ-RLA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA   85 (342)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG-GGG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh-hhc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876532 111          2378899999999999999998  899999999


Q ss_pred             CCC--------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCC--CCCCCCCCCCC----Cccc-cchHHHHH
Q 023078           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~--~~~~e~~~~~p----~~~~-~~k~~~E~  137 (287)
                      +..              ..++.++++++.  ++++|||+||.++|+....  .+ +|+.+..|    .+.| .+|..+|.
T Consensus        86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~  164 (342)
T 2x4g_A           86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE  164 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence            852              234678889887  8899999999999986543  34 78888788    7777 99999999


Q ss_pred             HHHh---cCCcEEEEccCceecCCC-CCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceE
Q 023078          138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       138 ~~~~---~~~~~~ilr~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~  213 (287)
                      +++.   .+++++++||+.+||+.. ... +..++..+..+....+   +++.++++|++|+|++++.+++++.. +++|
T Consensus       165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            8854   389999999999999976 323 4556677777765544   56789999999999999999987654 7899


Q ss_pred             EeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcC------------CCC------ccccccccccccchhhHhhhhc
Q 023078          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD------------FGK------KKAFPFRDQVIASLKTAFSVNM  275 (287)
Q Consensus       214 ~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~------------~~~------~~~~~~~~~~~~~~~k~~~~lg  275 (287)
                      |++++. +|+.|+++.+.+.+|.+.+ + ..+.....            .+.      ...........+|++|++++||
T Consensus       240 ~v~~~~-~s~~e~~~~i~~~~g~~~~-~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  316 (342)
T 2x4g_A          240 LLTGHN-LEMADLTRRIAELLGQPAP-Q-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELG  316 (342)
T ss_dssp             EECCEE-EEHHHHHHHHHHHHTCCCC-E-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHC
T ss_pred             EEcCCc-ccHHHHHHHHHHHhCCCCC-C-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCC
Confidence            999998 9999999999999998763 3 44432110            010      0000001112789999999999


Q ss_pred             c-ccc
Q 023078          276 V-KRS  279 (287)
Q Consensus       276 ~-~p~  279 (287)
                      | +|.
T Consensus       317 ~~~p~  321 (342)
T 2x4g_A          317 FFSTT  321 (342)
T ss_dssp             CCCCS
T ss_pred             CCCCC
Confidence            9 883

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=3.6e-36  Score=250.63  Aligned_cols=248  Identities=16%  Similarity=0.108  Sum_probs=200.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+ +|++|++++|+..                      ++.+|+.|.+.+.++++..++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999 8999999999752                      2468999999999999844599999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +..                ..++.+++++++  ++ ||||+||.++|+.....+++|+.+..|.+.| .+|.++|.++++
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            863                234788999987  55 8999999999998776788898888888888 999999999988


Q ss_pred             cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc--C-CCceEEeeCC
Q 023078          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A-SRQVFNISGE  218 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~-~~~~~~~~~~  218 (287)
                      ...+++++||+++|||+.. .+...++..+..+.++.+.+  ++.++++|++|+|+++..+++++.  . .+++||++++
T Consensus       142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            7789999999999999754 45666777777777766554  378999999999999999998652  2 3689999999


Q ss_pred             CcccHHHHHHHHHHHhCCCC-----CeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          219 KYVTFDGLARACAKAAGFPE-----PELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       219 ~~~s~~~i~~~i~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +++|++|+++.+.+.+|.+.     +.+...+...+..  .   ...... .+|++|++++|||+|..
T Consensus       219 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~d~~k~~~~lG~~p~~  281 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPT--P---ASRPGNSRLNTEKFQRNFDLILPQ  281 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCC--S---SCCCSBCCBCCHHHHHHHTCCCCB
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccccccccccccccC--c---CCCCCceeeeHHHHHHhcCCCCCC
Confidence            99999999999999999763     3444444322110  0   011122 78999999999999974

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-35  Score=246.74  Aligned_cols=241  Identities=17%  Similarity=0.144  Sum_probs=197.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+                          .+|++|.+.+.++++..++|+|||+|
T Consensus        18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999985                          25888999999988755699999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +...                .++.+++++++  ++ +||++||.++|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            8642                34678888876  66 9999999999998766678898888888888 999999999988


Q ss_pred             cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcc
Q 023078          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~  221 (287)
                      .+.+++++||+.+||| . ..++..++.....+.++...+  ++.++++|++|+|++++.+++++  .+++||+++++++
T Consensus       151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            8889999999999999 3 455666777777777665544  47789999999999999999875  5789999999999


Q ss_pred             cHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       222 s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      |+.|+++.+.+.+|.+. .+...+.......     ...... .+|++|++++|||+|..
T Consensus       225 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~p~~  278 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDV-KVTPCTTEEFPRP-----AKRPKYSVLRNYMLELTTGDITRE  278 (292)
T ss_dssp             EHHHHHHHHHHHHCCCC-EEEEECSTTSCCS-----SCCCSBCCBCCHHHHHTTCCCCCB
T ss_pred             cHHHHHHHHHHHhCCCC-ceeeccccccCcc-----cCCCccccccHHHHHHHcCCCCCC
Confidence            99999999999999875 5555544332110     011112 78999999999999973

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.5e-35  Score=256.36  Aligned_cols=269  Identities=21%  Similarity=0.267  Sum_probs=199.6

Q ss_pred             CCcccchHHHHHHHHH-HCCCeEEEEecCCccccccCCCCCchhh----hhh-----cCC---cEEEEecCCChHHHHhh
Q 023078            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKSS   67 (287)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~~~~~~~----~~~-----~~~---~~~~~~d~~~~~~~~~~   67 (287)
                      ||||||||++|++.|+ ++|++|++++|+.......-.......+    ...     ..+   ++++.+|++|.+.+.++
T Consensus         8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   87 (397)
T 1gy8_A            8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (397)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHH
Confidence            7999999999999999 9999999999975441000000000001    000     124   88999999999999998


Q ss_pred             hccCC-ccEEEEccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCC-------CCCCCCCC
Q 023078           68 LSAKG-FDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (287)
Q Consensus        68 ~~~~~-~d~vi~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~-------~~~~~e~~  121 (287)
                      ++..+ +|+|||+|+..                ..++.+++++++  ++++||++||.++|+...       ..+++|+.
T Consensus        88 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~  167 (397)
T 1gy8_A           88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (397)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             HHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccC
Confidence            87556 99999999864                235677888876  788999999999998765       56788888


Q ss_pred             CCCCCccc-cchHHHHHHHHh----cCCcEEEEccCceecCCC----------CCchhHHHH----HHHHcCC-------
Q 023078          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR-------  175 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~----------~~~~~~~~~----~~~~~~~-------  175 (287)
                      +..|.+.| .+|.++|.+++.    .+++++++||+++|||..          ...++..++    ..+..+.       
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
T 1gy8_A          168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (397)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence            88887878 999999998753    589999999999999963          123444444    1333443       


Q ss_pred             -----CcccCC------CCCceeeeeeHHHHHHHHHHHhcCCcCC-----C---ceEEeeCCCcccHHHHHHHHHHHhCC
Q 023078          176 -----PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       176 -----~~~~~~------~~~~~~~~i~~~Dva~~~~~~~~~~~~~-----~---~~~~~~~~~~~s~~~i~~~i~~~~g~  236 (287)
                           ++.+++      ++++.++|+|++|+|++++.+++++...     +   ++||+++++++|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  327 (397)
T 1gy8_A          248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (397)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             cccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCC
Confidence                 344444      6778999999999999999998764322     3   79999999999999999999999998


Q ss_pred             CCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          237 PEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +.+ +...+...          ..... .+|++|++++|||+|..
T Consensus       328 ~~~-~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~  361 (397)
T 1gy8_A          328 PIP-VRECGRRE----------GDPAYLVAASDKAREVLGWKPKY  361 (397)
T ss_dssp             CCC-EEEECCCT----------TCCSEECBCCHHHHHHTCCCCSC
T ss_pred             CCC-eeeCCCCC----------CcccccccCHHHHHHHhCCCCCc
Confidence            763 33332210          01112 78999999999999974

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=3e-35  Score=255.02  Aligned_cols=269  Identities=17%  Similarity=0.159  Sum_probs=200.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc------cCCCC-----Cchhh-hhhcCCcEEEEecCCChHHHHhhh
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPGE-----SDQEF-AEFSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~------~~~~~-----~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~   68 (287)
                      ||||||||++|++.|+++|++|++++|.......      .+...     ....+ .....+++++.+|++|.+.+.+++
T Consensus        17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   96 (404)
T 1i24_A           17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   96 (404)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence            7999999999999999999999999986432110      00000     00000 011357899999999999999999


Q ss_pred             ccCCccEEEEccCCC-------------------ccchHHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCCCC------
Q 023078           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------  120 (287)
Q Consensus        69 ~~~~~d~vi~~a~~~-------------------~~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~------  120 (287)
                      +..++|+|||+|+..                   ..++.+++++++  ++ ++||++||.++||... .+.+|+      
T Consensus        97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~  175 (404)
T 1i24_A           97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH  175 (404)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred             hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence            833499999999863                   224667888876  66 5999999999998654 345554      


Q ss_pred             --------CCCCCCccc-cchHHHHHHHHh----cCCcEEEEccCceecCCCC------------------CchhHHHHH
Q 023078          121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (287)
Q Consensus       121 --------~~~~p~~~~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~~------------------~~~~~~~~~  169 (287)
                              .+..|.+.| .+|..+|.+++.    .+++++++||+++|||++.                  ..++..++.
T Consensus       176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (404)
T 1i24_A          176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  255 (404)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence                    345666777 999999998743    4899999999999999753                  245677888


Q ss_pred             HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC--ceEEeeCCCcccHHHHHHHHHHH---hCCCCCeEEEc
Q 023078          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKA---AGFPEPELVHY  244 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~i~~~i~~~---~g~~~~~~~~~  244 (287)
                      .+..++++.+++++++.++|+|++|+|++++.+++++...+  ++||+++ .++|+.|+++.+.+.   +|.+. .+...
T Consensus       256 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~-~~~~~  333 (404)
T 1i24_A          256 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDV-KKMTV  333 (404)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCC-CEEEE
T ss_pred             HHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCc-ccccc
Confidence            88888887777888899999999999999999998765445  6999998 789999999999998   78765 34444


Q ss_pred             CCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          245 NPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +.....       .......+|++|++ +|||+|..
T Consensus       334 p~~~~~-------~~~~~~~~d~~k~~-~LG~~p~~  361 (404)
T 1i24_A          334 PNPRVE-------AEEHYYNAKHTKLM-ELGLEPHY  361 (404)
T ss_dssp             CCSSCS-------CSSCCCCBCCCHHH-HTTCCCCC
T ss_pred             CcccCc-------cccceEecCHHHHH-HcCCCcCc
Confidence            432210       00011157999997 69999975

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-35  Score=250.14  Aligned_cols=264  Identities=20%  Similarity=0.276  Sum_probs=198.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|.........    ...+.. ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN----LHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH----HHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhh----hhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            799999999999999999999999998542211000    001111 236889999999999999999833399999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCC-cEEEEeeeeEeecCCCCC----------------CCCCCCCCC
Q 023078           81 GRE----------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVDP  125 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~-~~i~~Ss~~~y~~~~~~~----------------~~e~~~~~p  125 (287)
                      +..                ..++.++++++.  +++ +||++||.++|+.....+                .+|+.+..|
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  161 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  161 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC
Confidence            863                234677888876  665 999999999998644322                455556667


Q ss_pred             Cccc-cchHHHHHHHHh----cCCcEEEEccCceecCCCCC----chhHHHHHHHHcCC-----CcccCCCCCceeeeee
Q 023078          126 KSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLGH  191 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~  191 (287)
                      .+.| .+|..+|.+++.    .+++++++||+++|||....    .++..++.....+.     ++..++++++.++++|
T Consensus       162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  241 (347)
T 1orr_A          162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  241 (347)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEE
Confidence            7777 999999998754    48999999999999997532    24455555555444     5666688889999999


Q ss_pred             HHHHHHHHHHHhcC-CcCCCceEEeeCCC--cccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccch
Q 023078          192 VKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASL  267 (287)
Q Consensus       192 ~~Dva~~~~~~~~~-~~~~~~~~~~~~~~--~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  267 (287)
                      ++|+|++++.++++ ....+++||++++.  ++|+.|+++.+.+.+|.+. .+...+...          ..... .+|+
T Consensus       242 v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~d~  310 (347)
T 1orr_A          242 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM-RFTNLPVRE----------SDQRVFVADI  310 (347)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC-CEEEECCCS----------SCCSEECBCC
T ss_pred             HHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC-CceeCCCCC----------CCcceeecCH
Confidence            99999999999986 23367899999886  4999999999999999875 444443211          11112 6899


Q ss_pred             hhHhhhhcccccc
Q 023078          268 KTAFSVNMVKRSM  280 (287)
Q Consensus       268 ~k~~~~lg~~p~~  280 (287)
                      +|++++|||+|..
T Consensus       311 ~k~~~~lG~~p~~  323 (347)
T 1orr_A          311 KKITNAIDWSPKV  323 (347)
T ss_dssp             HHHHHHHCCCCCS
T ss_pred             HHHHHHHCCCccC
Confidence            9999999999963

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.1e-34  Score=247.80  Aligned_cols=270  Identities=19%  Similarity=0.192  Sum_probs=203.4

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++ |++|++++|+... ..+.+..     +. ...+++++.+|++|.+.+.++++..++|+|||
T Consensus         6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD-----IS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh-----hh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998 7999999997521 1111110     00 03578999999999999999987557999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC----CCC-------cEEEEeeeeEeecCCC--C--------CCCCCC
Q 023078           79 INGRE----------------ADEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD  121 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~----~~~-------~~i~~Ss~~~y~~~~~--~--------~~~e~~  121 (287)
                      +|+..                ..++.++++++.    +++       +||++||.++||....  .        +++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            99864                235677888865    555       9999999999986431  1        677877


Q ss_pred             CCCCCccc-cchHHHHHHHHh----cCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      +..|.+.| .+|..+|.+++.    .+++++++||+++|||... ..++..++..+..+.++.+++++.+.++++|++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            77787778 999999998753    5899999999999999754 34556677777778777777888889999999999


Q ss_pred             HHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhh
Q 023078          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVN  274 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~l  274 (287)
                      |++++.++++.. .+++||++++.++|+.|+++.+.+.+|.+.+...... ..+.....  .+..... .+|++|++++|
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~-~~~~~~~~--~~~~~~~~~~d~~k~~~~l  315 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR-EQITYVAD--RPGHDRRYAIDAGKISREL  315 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG-GGEEEECC--CTTCCCBCCBCCHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccc-cceeecCC--CCcccceeecCHHHHHHHh
Confidence            999999997653 6789999999999999999999999987543211000 00000000  0111112 68999999999


Q ss_pred             cccccc
Q 023078          275 MVKRSM  280 (287)
Q Consensus       275 g~~p~~  280 (287)
                      ||+|..
T Consensus       316 G~~p~~  321 (361)
T 1kew_A          316 GWKPLE  321 (361)
T ss_dssp             CCCCSC
T ss_pred             CCCCcc
Confidence            999964

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.3e-35  Score=247.15  Aligned_cols=244  Identities=20%  Similarity=0.265  Sum_probs=194.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.                         .+|+.|.+.+.++++..++|+|||++
T Consensus         9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            79999999999999999999999987752                         25889999999988755799999999


Q ss_pred             CCCc-----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC----CCCCC-ccc-cchHHH
Q 023078           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK-SRH-KGKLNT  135 (287)
Q Consensus        81 ~~~~-----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~----~~~p~-~~~-~~k~~~  135 (287)
                      +...                 .++.+++++++  ++++|||+||.++||.....+++|+.    +..|. +.| .+|..+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence            8642                 34677888876  78899999999999976666777776    45564 356 999999


Q ss_pred             HHHHHh----cCCcEEEEccCceecCCCC-----CchhHHHHHHHHc----C-CCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       136 E~~~~~----~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      |.+++.    .+++++++||+++|||+..     ..++..++..+..    + .++.+++++++.++|+|++|+|++++.
T Consensus       144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            998854    5899999999999999754     2456666666553    3 456666788899999999999999999


Q ss_pred             HhcCCcC--------CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhh
Q 023078          202 VLGNEKA--------SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSV  273 (287)
Q Consensus       202 ~~~~~~~--------~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  273 (287)
                      +++++..        .+++||+++++++|+.|+++.+.+.+|.+. .+...+....         ......+|++|+++ 
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~---------~~~~~~~d~~k~~~-  292 (321)
T 1e6u_A          224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG-RVVFDASKPD---------GTPRKLLDVTRLHQ-  292 (321)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS-EEEEETTSCC---------CCSBCCBCCHHHHH-
T ss_pred             HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC-ceEeCCCCCC---------CcccccCCHHHHHh-
Confidence            9987653        257999999999999999999999999875 4444432210         00112789999999 


Q ss_pred             hcccccc
Q 023078          274 NMVKRSM  280 (287)
Q Consensus       274 lg~~p~~  280 (287)
                      |||+|..
T Consensus       293 lG~~p~~  299 (321)
T 1e6u_A          293 LGWYHEI  299 (321)
T ss_dssp             TTCCCCC
T ss_pred             cCCccCC
Confidence            9999963

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.6e-34  Score=244.75  Aligned_cols=265  Identities=22%  Similarity=0.250  Sum_probs=195.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||+++++.|+++|++|++++|........+     ..+.. ...+++++.+|++|.+.+.++++..++|+|||+
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            799999999999999999999999987543211100     11111 124678999999999999999875569999999


Q ss_pred             cCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-cchHHHHHHH
Q 023078           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESVL  139 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-~~k~~~E~~~  139 (287)
                      |+..                ..++.+++++++  ++++||++||.++|+.....+.+|+.+..| .+.| .+|.++|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            9863                234667888876  789999999999998766667777776655 5667 9999999987


Q ss_pred             Hh----c-CCcEEEEccCceecCCC-----------CCchhHHHHHHHH-cCCCcccCC------CCCceeeeeeHHHHH
Q 023078          140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA  196 (287)
Q Consensus       140 ~~----~-~~~~~ilr~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~Dva  196 (287)
                      +.    . +++++++||+++||+..           ...+...+..... .+..+.+++      ++++.++|+|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            53    3 79999999999999832           1234445554444 333343332      457889999999999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhh
Q 023078          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVN  274 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  274 (287)
                      ++++.++++.  ...+++||+++++++|+.|+++.+.+.+|.+.+ +...+...   +.      .....+|++|++++|
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~---~~------~~~~~~d~~k~~~~l  310 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN-YHFAPRRE---GD------LPAYWADASKADREL  310 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC-EEEECCCT---TC------CSBCCBCCHHHHHHH
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc-ceeCCCCC---Cc------hhhhhcCHHHHHHHc
Confidence            9999988753  222379999999999999999999999998753 33322211   00      001268999999999


Q ss_pred             cccccc
Q 023078          275 MVKRSM  280 (287)
Q Consensus       275 g~~p~~  280 (287)
                      ||+|..
T Consensus       311 G~~p~~  316 (338)
T 1udb_A          311 NWRVTR  316 (338)
T ss_dssp             CCCCCC
T ss_pred             CCCcCC
Confidence            999974

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=7e-35  Score=246.14  Aligned_cols=251  Identities=17%  Similarity=0.138  Sum_probs=196.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.....+....         ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999999999999975542211111         147889999999999999988755799999999


Q ss_pred             CCCc-------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCC--CCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~~-------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~--~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +...             .++.++++++.  ++++||++||.++|+.....  +++|+.  .|.+.| .+|..+|.+++..
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence            8642             34677888876  88999999999999865433  666665  566677 9999999999888


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH-HHHHHhcCCcCCCceEEeeCCCcc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~-~~~~~~~~~~~~~~~~~~~~~~~~  221 (287)
                      +++++++||+++|||+....+...++..+..+.  ..++++. .++++|++|+|+ +++.+++++.  +++||++++.++
T Consensus       175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGH  249 (330)
T ss_dssp             SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCE
T ss_pred             CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCC
Confidence            999999999999999864456666667766665  3445556 889999999999 9999988754  789999999999


Q ss_pred             cHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhH-----hhhhcccccc
Q 023078          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTA-----FSVNMVKRSM  280 (287)
Q Consensus       222 s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~lg~~p~~  280 (287)
                      |+.|+++.+.+.+|.+ + +...+..          +......+|++|+     ++ |||+|..
T Consensus       250 s~~e~~~~i~~~~g~~-~-~~~~~~~----------~~~~~~~~d~~k~~~~~l~~-lG~~p~~  300 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGAT-L-AEPVPVV----------APGADDVPSVVLDPSKTETE-FGWKAKV  300 (330)
T ss_dssp             EHHHHHHHHHHHHTCC-C-SSCCCEE----------CCCTTSCSEECBCCHHHHHH-HCCCCCC
T ss_pred             CHHHHHHHHHHHhCCC-C-ceeCCCC----------cchhhccCCHHHHhhchHHH-cCCcccC
Confidence            9999999999999976 1 1111110          0001116788888     77 9999964

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1e-34  Score=245.44  Aligned_cols=254  Identities=20%  Similarity=0.194  Sum_probs=196.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.....+.+..         ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            79999999999999999999999999986543222221         147889999999999999999833399999999


Q ss_pred             CCCc-------------cchHHHHHhCC--CCCcEEEEeeeeEee----cCCCCCCCCCCCCCCC-ccc-cchHHHHHHH
Q 023078           81 GREA-------------DEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-SRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~~-------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~----~~~~~~~~e~~~~~p~-~~~-~~k~~~E~~~  139 (287)
                      +...             .++.++++++.  ++++||++||.++|+    .... +++|+.  .|. +.| .+|..+|.++
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~  174 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL  174 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence            8642             34677888876  788999999999998    5444 667766  566 667 9999999999


Q ss_pred             Hh-cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCC
Q 023078          140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE  218 (287)
Q Consensus       140 ~~-~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~  218 (287)
                      +. .. +++++||+++|||+....+.+.++..+..+.  .+++ ++..+++++++|+|++++.+++++.  +++||++++
T Consensus       175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~  248 (333)
T 2q1w_A          175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSG  248 (333)
T ss_dssp             HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCS
T ss_pred             HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCC
Confidence            87 66 9999999999999843456666777776665  3334 5678999999999999999998765  789999999


Q ss_pred             CcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          219 KYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       219 ~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ..+|+.|+++.+.+.+|.+  .+...+... ..  .  ........+|++|+++. ||+|..
T Consensus       249 ~~~s~~e~~~~i~~~~g~~--~~~~~~~~~-~~--~--~~~~~~~~~d~~k~~~~-G~~p~~  302 (333)
T 2q1w_A          249 TDVAIKELYDAVVEAMALP--SYPEPEIRE-LG--P--DDAPSILLDPSRTIQDF-GKIEFT  302 (333)
T ss_dssp             CCEEHHHHHHHHHHHTTCS--SCCCCEEEE-CC--T--TSCCCCCBCCHHHHHHH-CCCCCC
T ss_pred             CCccHHHHHHHHHHHhCCC--CceeCCCCC-cc--c--ccccccccCCHHHHHhc-CCCcCC
Confidence            9999999999999999976  111111110 00  0  00011127899999998 999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.6e-34  Score=243.89  Aligned_cols=254  Identities=19%  Similarity=0.269  Sum_probs=196.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.......+.     .+. ...+++++.+|+.+..     +.  ++|+|||+|
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~-----~~--~~d~vih~A   99 (343)
T 2b69_A           33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----HWI-GHENFELINHDVVEPL-----YI--EVDQIYHLA   99 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-----GGT-TCTTEEEEECCTTSCC-----CC--CCSEEEECC
T ss_pred             EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhh-----hhc-cCCceEEEeCccCChh-----hc--CCCEEEECc
Confidence            7999999999999999999999999997543221111     000 0257889999998752     44  899999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCC-----CCCCCCccc-cchHHHH
Q 023078           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~-----~~~~p~~~~-~~k~~~E  136 (287)
                      +...                .++.+++++++  ++ +||++||.++||.....+.+|+     .+..|.+.| .+|..+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            8632                24677888876  65 9999999999987665566666     344556667 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCC---CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      .+++    +.+++++++||+++|||+..   ..++..++.....++++.+++++++.++++|++|+|++++.+++.+.  
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--  256 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--  256 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence            9874    45899999999999999753   34566677777788877777888889999999999999999987653  


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +++||+++++++|+.|+++.+.+.+|.+. .+...+.....       +  ....+|++|++++|||+|..
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~p~~~~~-------~--~~~~~d~~k~~~~lG~~p~~  317 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDD-------P--QKRKPDIKKAKLMLGWEPVV  317 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCC-CEEEECCCTTC-------C--CCCCBCCHHHHHHHCCCCCS
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCC-CceeCCCCCCC-------C--ceecCCHHHHHHHcCCCCCC
Confidence            57999999999999999999999999876 44444432110       0  01167999999999999863

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-34  Score=248.14  Aligned_cols=276  Identities=16%  Similarity=0.108  Sum_probs=201.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc-cCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++|++++|+...... .+.. ....... ...+++++.+|++|.+.+.++++..++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih  108 (375)
T 1t2a_A           30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH-LYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYN  108 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGG-GC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHH-HhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998654110 0100 0000000 13578899999999999999998545799999


Q ss_pred             ccCCCc----------------cchHHHHHhCC--CC---CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHH
Q 023078           79 INGREA----------------DEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        79 ~a~~~~----------------~~~~~l~~a~~--~~---~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      +|+...                .++.++++++.  ++   ++||++||.++|+.....+++|+.+..|.+.| .+|..+|
T Consensus       109 ~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  188 (375)
T 1t2a_A          109 LGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAY  188 (375)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHH
Confidence            998632                34677888876  55   79999999999997666678888888888878 9999999


Q ss_pred             HHHH----hcCCcEEEEccCceecCCCCCch----hHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          137 SVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       137 ~~~~----~~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      .+++    +.+++++++|++++|||+....+    +..++..+..+.. ...++++++.++|+|++|+|++++.+++++.
T Consensus       189 ~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~  268 (375)
T 1t2a_A          189 WIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE  268 (375)
T ss_dssp             HHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC
Confidence            9875    35899999999999999754333    2334455555543 3345778889999999999999999998754


Q ss_pred             CCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEE--cCCCC---------cCCCCcccccccccc-ccchhhHhhhhc
Q 023078          208 ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPKE---------FDFGKKKAFPFRDQV-IASLKTAFSVNM  275 (287)
Q Consensus       208 ~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~-~~~~~k~~~~lg  275 (287)
                        +++||+++++++|+.|+++.+.+.+|.+. .+..  ++...         ..+......+..... .+|++|++++||
T Consensus       269 --~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  345 (375)
T 1t2a_A          269 --PEDFVIATGEVHSVREFVEKSFLHIGKTI-VWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLN  345 (375)
T ss_dssp             --CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHC
T ss_pred             --CceEEEeCCCcccHHHHHHHHHHHhCCCc-ccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcC
Confidence              37999999999999999999999999764 2210  11110         001111111111122 689999999999


Q ss_pred             ccccc
Q 023078          276 VKRSM  280 (287)
Q Consensus       276 ~~p~~  280 (287)
                      |+|..
T Consensus       346 ~~p~~  350 (375)
T 1t2a_A          346 WKPRV  350 (375)
T ss_dssp             CCCCS
T ss_pred             CCccC
Confidence            99974

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-35  Score=247.72  Aligned_cols=256  Identities=16%  Similarity=0.183  Sum_probs=180.6

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC---CccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~d~v   76 (287)
                      ||||||||++|++.|+++| ++|++++|++.....       ..+    .++. +.+|+++.+.+.++++..   ++|+|
T Consensus         5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNL----VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------HHH----HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-------hhc----Ccce-eccccccHHHHHHHHhccccCCCcEE
Confidence            7999999999999999999 999999997654210       000    1233 678999999998888721   49999


Q ss_pred             EEccCCCc--------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           77 YDINGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        77 i~~a~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      ||+++...              .++.+++++++  ++ +||++||.++||.....+++|+.+..|.+.| .+|..+|.++
T Consensus        73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            99998632              34678888887  78 9999999999987766678888888888888 9999999988


Q ss_pred             Hh----cCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccCCCCCc-eeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          140 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       140 ~~----~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      +.    .+++++++||+++|||+..     ..++..++..+..++++.+++++++ .++++|++|+|++++.+++++.  
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            53    4799999999999999754     3556677888888887777777888 8999999999999999998765  


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcc-ccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMV-KRS  279 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~-~p~  279 (287)
                      +++||+++++++|+.|+++.+.+.+|.+.......+....  .   ..  .....+|++|+++ ||| .|.
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~---~~--~~~~~~~~~~~~~-lG~~~~~  292 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--G---RY--QAFTQADLTNLRA-AGYDKPF  292 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC--------------------------C--CCSCCBCCHHHHH-TTCCCCC
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhh--c---cc--ccccccchHHHHh-cCCCCCC
Confidence            7899999999999999999999999976112222221100  0   00  0111678999976 999 554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=4.6e-35  Score=245.34  Aligned_cols=257  Identities=13%  Similarity=0.041  Sum_probs=195.4

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++  |++|++++|+.....  +           ..+++++.+|+.|.+.+.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~-----------~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--V-----------VNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--H-----------HHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--c-----------cCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998  899999999765411  0           1367889999999999999997668999999


Q ss_pred             ccCCCc---------------cchHHHHHhCC--CCCcEEEEeeeeEeecCC-CCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           79 INGREA---------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~~---------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~-~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +|+...               .++.+++++++  ++++|||+||.++|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            998632               34678888876  788999999999998643 3456777777788878 9999999987


Q ss_pred             H----hcCCcEEEEccCceecCCCC------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC-
Q 023078          140 E----SKGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-  208 (287)
Q Consensus       140 ~----~~~~~~~ilr~~~v~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-  208 (287)
                      +    +.+++++++||+++||+...      ..+...+...+.. +.+..++++++.++|+|++|+|++++.+++++.. 
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD-KKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT-SEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC-CCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence            4    35899999999999997531      1133334444444 4455567778899999999999999999987643 


Q ss_pred             --CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          209 --SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       209 --~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                        .+++||+++ +.+|++|+++.+.+.+|. . .+...+...     ... .......+|++|++++|||+|..
T Consensus       234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~-~i~~~~~~~-----~~~-~~~~~~~~d~~k~~~~lG~~p~~  298 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPTEIANEIKKHIPE-F-TITYEPDFR-----QKI-ADSWPASIDDSQAREDWDWKHTF  298 (312)
T ss_dssp             CCCSSCEECCS-EEECHHHHHHHHHTTCTT-C-EEEECCCTH-----HHH-HTTSCSSBCCHHHHHHHCCCCCC
T ss_pred             cccCceEEeCC-CccCHHHHHHHHHHHCCC-C-ceEeccCcc-----ccc-cccccccCCHHHHHHHcCCCCCC
Confidence              247999986 789999999999999983 2 333322100     000 00001167999999999999974

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=2.3e-34  Score=245.52  Aligned_cols=255  Identities=17%  Similarity=0.185  Sum_probs=199.3

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC---CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~d~   75 (287)
                      ||||||||++|++.|+++| ++|++++|+.... ...+            .++. +.+|+++.+.+..+++..   ++|+
T Consensus        52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence            7999999999999999999 9999999976542 1111            2233 678999999888888631   5999


Q ss_pred             EEEccCCC--------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      |||+|+..              ..++.+++++++  ++ +||++||.++|+.....+++|+.+..|.+.| .+|..+|.+
T Consensus       119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence            99999863              235678888887  77 9999999999987766678888888888888 999999998


Q ss_pred             HHh----cCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccCCCCCc-eeeeeeHHHHHHHHHHHhcCCcC
Q 023078          139 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       139 ~~~----~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      ++.    .+++++++||+++|||+..     ..++..++..+..+..+.+++++++ .++++|++|+|++++.+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            753    4799999999999999754     2456667778888887766677788 8999999999999999998765 


Q ss_pred             CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcc-ccc
Q 023078          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMV-KRS  279 (287)
Q Consensus       209 ~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~-~p~  279 (287)
                       +++||+++++++|+.|+++.+.+.+|.+.......+....  .     .......+|++|+++ ||| .|.
T Consensus       277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~-----~~~~~~~~~~~k~~~-lG~~~~~  339 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--G-----RYQAFTQADLTNLRA-AGYDKPF  339 (357)
T ss_dssp             -CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGT--T-----SCCSBCCCCCHHHHH-TTCCCCC
T ss_pred             -CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccc--c-----ccccccccCHHHHHH-cCCCCCC
Confidence             7899999999999999999999999987223332222110  0     000111678999986 999 553

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=2.7e-34  Score=247.20  Aligned_cols=269  Identities=16%  Similarity=0.139  Sum_probs=199.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-ccCCCCCchhhhhhcC-CcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++|++++|+..... ..+... ......... +++++.+|++|.+.+.++++..++|+|||
T Consensus        34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  112 (381)
T 1n7h_A           34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHI-YIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYN  112 (381)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTT-C--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhh-hhccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999999865411 011100 000000012 78899999999999999998445799999


Q ss_pred             ccCCCc----------------cchHHHHHhCC--CCC-----cEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           79 INGREA----------------DEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        79 ~a~~~~----------------~~~~~l~~a~~--~~~-----~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      +|+...                .++.++++++.  +++     +||++||.++||.... +++|+.+..|.+.| .+|..
T Consensus       113 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~  191 (381)
T 1n7h_A          113 LAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCA  191 (381)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHH
T ss_pred             CCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHH
Confidence            998632                34677888876  454     9999999999997665 78888888888888 99999


Q ss_pred             HHHHHHh----cCCcEEEEccCceecCCCCCch----hHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          135 TESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       135 ~E~~~~~----~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      +|.+++.    .+++++++|++++|||+....+    +..++..+..+.. ...++++++.++|+|++|+|++++.++++
T Consensus       192 ~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          192 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            9998753    4899999999999999754433    2334445555543 33347778899999999999999999987


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +.  +++||+++++++|+.|+++.+.+.+|.+.+....+.+...       .+..... .+|++|++++|||+|..
T Consensus       272 ~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~d~~k~~~~lG~~p~~  338 (381)
T 1n7h_A          272 EK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-------RPAEVDNLQGDASKAKEVLGWKPQV  338 (381)
T ss_dssp             SS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS-------CSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred             CC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccC-------CccccccccCCHHHHHHhcCCcccC
Confidence            54  3799999999999999999999999976321112221111       1111112 67999999999999954

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-34  Score=248.17  Aligned_cols=235  Identities=20%  Similarity=0.177  Sum_probs=179.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||+++++.|+++|++|++++|+..... ..+... .........+++++.+|++|.+.+.++++..++|+|||+
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (372)
T 1db3_A            7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHI-YQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (372)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHH-hhccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865411 111100 000000125788999999999999999984458999999


Q ss_pred             cCCC----------------ccchHHHHHhCC--CC---CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~--~~---~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      |+..                ..++.++++++.  ++   ++||++||.++|+.....+.+|+.+..|.+.| .+|..+|.
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (372)
T 1db3_A           86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (372)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence            9862                224677888876  55   79999999999987766678888888888888 99999999


Q ss_pred             HHH----hcCCcEEEEccCceecCCCCCch----hHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      +++    +.+++++++|++++|||+....+    +..++..+..+.. ...++++++.++|+|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  244 (372)
T 1db3_A          166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (372)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence            874    35899999999999999754332    3445556666653 3345778899999999999999999998754 


Q ss_pred             CCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          209 SRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       209 ~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                       +++||+++++++|+.|+++.+.+.+|.+.
T Consensus       245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  273 (372)
T 1db3_A          245 -PEDFVIATGVQYSVRQFVEMAAAQLGIKL  273 (372)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred             -CceEEEcCCCceeHHHHHHHHHHHhCCCc
Confidence             47999999999999999999999999753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.1e-34  Score=243.36  Aligned_cols=251  Identities=18%  Similarity=0.178  Sum_probs=182.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+...                 .+  ++.+|++|.+.+.++++..++|+|||+|
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999999999986433                 12  6789999999888888744599999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +..                ..++.++++++.  ++ +|||+||.++|+. ...+++|+.+..|.+.| .+|..+|.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            852                345788888876  65 9999999999987 45578888888888888 999999999998


Q ss_pred             cCCcEEEEccCceecCCCCC--chhHHHHHHHH-cCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC---cCCCceEEe
Q 023078          142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~~~~~~~  215 (287)
                      .+++++++||+.+||+....  .++..++..+. .+..+.+.  +++.++++|++|+|++++.++++.   ...+++||+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            89999999999999997542  44555666666 66655443  357789999999999999988753   235789999


Q ss_pred             eCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          216 SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       216 ~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++++++|+.|+++.+.+.+|.+.+.+...+... ...  ...+  ....+|++|+++. ||+|..
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~--~~~~--~~~~~d~~k~~~~-G~~p~~  283 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPSSHLRPITDSP-VLG--AQRP--RNAQLDCSKLETL-GIGQRT  283 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCC-CSS--SCCC--SBCCBCCHHHHHT-TCCCCC
T ss_pred             cCCCcccHHHHHHHHHHHhCCChhheecccccc-ccc--cCCC--cccccchHHHHhc-CCCCCC
Confidence            999999999999999999998864344444300 000  0001  1127899999997 998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=8.3e-34  Score=240.85  Aligned_cols=270  Identities=19%  Similarity=0.186  Sum_probs=200.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||+++++.|+++|++|++++|+......       ..+...  ..+++++.+|++|.+.+.++++..++|+|||
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998654210       001100  2468899999999999999998445799999


Q ss_pred             ccCCC----------------ccchHHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      +|+..                ..++.++++++.  ++ ++||++||.++||.....+++|+.+..|.+.| .+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            99863                234677888876  66 89999999999998776678888887888878 999999998


Q ss_pred             HHh----cCCcEEEEccCceecCCCCCchh----HHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          139 LES----KGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       139 ~~~----~~~~~~ilr~~~v~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      ++.    .+++++++|+.++|||+......    ..++..+..+.. ....+++.+.++++|++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            753    48999999999999997543322    223444555543 2244677788999999999999999998754  


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEE--cCCCC---------cCCCCcccccccccc-ccchhhHhhhhccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVH--YNPKE---------FDFGKKKAFPFRDQV-IASLKTAFSVNMVK  277 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~  277 (287)
                      +++||+++++++|+.|+++.+.+.+|.+. .+..  .+...         ..+......+..... .+|++|++++|||+
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  318 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFDI-EWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWK  318 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCC
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCCc-cccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCc
Confidence            36999999999999999999999999764 2210  11110         001111111111122 67999999999999


Q ss_pred             ccc
Q 023078          278 RSM  280 (287)
Q Consensus       278 p~~  280 (287)
                      |..
T Consensus       319 p~~  321 (345)
T 2z1m_A          319 PRT  321 (345)
T ss_dssp             CCS
T ss_pred             ccC
Confidence            964

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.2e-33  Score=237.20  Aligned_cols=255  Identities=15%  Similarity=0.070  Sum_probs=192.0

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++  |++|++++|+....                .+++++.+|++|.+.+.++++..++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            799999999999999998  89999999975441                246788999999999999987668999999


Q ss_pred             ccCCC---------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCC-CCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~---------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~-~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +|+..               ..++.+++++++  ++++||++||.++|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A           69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence            99863               234678888876  788999999999998643 3456677777788888 9999999887


Q ss_pred             H----hcCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC--
Q 023078          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  208 (287)
Q Consensus       140 ~----~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~--  208 (287)
                      +    +.+++++++||+.+||+...     .......+.....++.+..++++++.++++|++|+|++++.+++++..  
T Consensus       149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~  228 (317)
T 3ajr_A          149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL  228 (317)
T ss_dssp             HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred             HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence            4    45899999999999997521     112222233334444555556777889999999999999999987542  


Q ss_pred             -CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          209 -SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       209 -~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                       .+++||+++ ..+|+.|+++.+.+.+|..  .+...+.  .+   ... .......+|++|++++|||+|..
T Consensus       229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~--~i~~~~~--~~---~~~-~~~~~~~~d~~k~~~~lG~~p~~  292 (317)
T 3ajr_A          229 VLRNGYNVTA-YTFTPSELYSKIKERIPEF--EIEYKED--FR---DKI-AATWPESLDSSEASNEWGFSIEY  292 (317)
T ss_dssp             SSCSCEECCS-EEECHHHHHHHHHTTCCSC--CEEECCC--HH---HHH-HTTSCSCBCCHHHHHHHCCCCCC
T ss_pred             ccCceEecCC-ccccHHHHHHHHHHHCCcc--ccccccc--cc---hhh-ccccccccCHHHHHHHcCCCCCC
Confidence             357999986 5799999999999999832  2332221  00   000 00001157999999999999974

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=3e-33  Score=256.22  Aligned_cols=266  Identities=18%  Similarity=0.206  Sum_probs=201.7

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHH-HHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++ |++|++++|+.........          ..+++++.+|+++.++ +.++++  ++|+|||
T Consensus       321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih  388 (660)
T 1z7e_A          321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP  388 (660)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence            799999999999999998 8999999998765322221          3578999999998765 777887  8999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCC-------CCCccc-cch
Q 023078           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-------~p~~~~-~~k  132 (287)
                      +|+..                ..++.++++++.  + ++||++||.++||.....+++|+.+.       .|.+.| .+|
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            99863                235678888876  6 99999999999997666667776642       344557 999


Q ss_pred             HHHHHHHH----hcCCcEEEEccCceecCCCC---------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       133 ~~~E~~~~----~~~~~~~ilr~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      ..+|.+++    +.+++++++||+++|||...         ..++..++..+.++.++.+++++++.++|+|++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            99999874    45899999999999999753         345666777788888777767778899999999999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC-cccHHHHHHHHHHHhCCCCCeEEEcCCCCc-C-CCCcc----ccccccccccchhhH
Q 023078          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEF-D-FGKKK----AFPFRDQVIASLKTA  270 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~-~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~-~-~~~~~----~~~~~~~~~~~~~k~  270 (287)
                      +.+++++.  ..+++||+++++ ++|+.|+++.+.+.+|.+.+.. ..+.... . .....    .........+|++|+
T Consensus       548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka  626 (660)
T 1z7e_A          548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH-HFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA  626 (660)
T ss_dssp             HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGG-GSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHH
T ss_pred             HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCccc-ccCccccccchhccccccccccchhhcccCHHHH
Confidence            99998754  357899999986 7999999999999998653221 1121110 0 00000    000011127899999


Q ss_pred             hhhhcccccc
Q 023078          271 FSVNMVKRSM  280 (287)
Q Consensus       271 ~~~lg~~p~~  280 (287)
                      +++|||+|..
T Consensus       627 ~~~LG~~p~~  636 (660)
T 1z7e_A          627 HRCLDWEPKI  636 (660)
T ss_dssp             HHHHCCCCCC
T ss_pred             HHhcCCCccC
Confidence            9999999964

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=235.38  Aligned_cols=249  Identities=20%  Similarity=0.220  Sum_probs=178.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++||+|++++|++...                 .   +..|    +...+.++  ++|+|||++
T Consensus         6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------------~---~~~~----~~~~~~l~--~~d~vihla   59 (298)
T 4b4o_A            6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------------R---ITWD----ELAASGLP--SCDAAVNLA   59 (298)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------E---EEHH----HHHHHCCC--SCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------------e---eecc----hhhHhhcc--CCCEEEEec
Confidence            79999999999999999999999999975431                 1   1111    22334566  899999999


Q ss_pred             CCCc--------------------cchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHH
Q 023078           81 GREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        81 ~~~~--------------------~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~  135 (287)
                      +..+                    .++.+++++++    +.++||+.||.++||.....+.+|+.+..|.+++ ..+...
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~  139 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW  139 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence            7532                    23566776654    5566999999999999888889999888887776 444444


Q ss_pred             HHH--HHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceE
Q 023078          136 ESV--LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (287)
Q Consensus       136 E~~--~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~  213 (287)
                      |..  ..+.+++++++|++.+|||+.  .....+......+... ..+++++.++|||++|+++++..+++++.. +++|
T Consensus       140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLGG-PIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCCC-CBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCcc-eecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            443  346789999999999999963  4455555555555543 348889999999999999999999998764 4599


Q ss_pred             EeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcC--CCCccccccccccccchhhHhhhhccccccee
Q 023078          214 NISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD--FGKKKAFPFRDQVIASLKTAFSVNMVKRSMLA  282 (287)
Q Consensus       214 ~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  282 (287)
                      |+++++++|++|+++.+++.+|++..  .+.|...++  ++.....-.......+++|++ ++||++.+..
T Consensus       216 n~~~~~~~t~~e~~~~ia~~lgrp~~--~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp~  283 (298)
T 4b4o_A          216 NGVAPSSATNAEFAQTFGAALGRRAF--IPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFPE  283 (298)
T ss_dssp             EESCSCCCBHHHHHHHHHHHHTCCCC--CCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCCS
T ss_pred             EEECCCccCHHHHHHHHHHHhCcCCc--ccCCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCCC
Confidence            99999999999999999999997642  233332221  111100000001145678886 5899987643

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.8e-33  Score=236.63  Aligned_cols=261  Identities=15%  Similarity=0.047  Sum_probs=198.5

Q ss_pred             CCcccchHHHHHHHHHHCC-------CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      ||||||||++|++.|+++|       ++|++++|+...... ..          ..+++++.+|++|.+.+.++++ .++
T Consensus        20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~-~~~   87 (342)
T 2hrz_A           20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GF----------SGAVDARAADLSAPGEAEKLVE-ARP   87 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TC----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred             ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-cc----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence            7999999999999999999       899999998654221 01          3578899999999999998884 289


Q ss_pred             cEEEEccCCC---------------ccchHHHHHhCC--C-----CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           74 DVVYDINGRE---------------ADEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        74 d~vi~~a~~~---------------~~~~~~l~~a~~--~-----~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      |+|||+|+..               ..++.+++++++  +     +++||++||.++|+.....+++|+.+..|.+.| .
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~  167 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT  167 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence            9999999863               234677888876  4     789999999999987655678898888888888 9


Q ss_pred             chHHHHHHHHh----cCCcEEEEccCceec-CCCC----CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       131 ~k~~~E~~~~~----~~~~~~ilr~~~v~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      +|..+|.++++    .+++++++|++.+|| |+..    ..++..++.....+.+..++.+++...+++|++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence            99999998753    478999999999998 6532    23455667777777766555555677889999999999999


Q ss_pred             HhcCCcC---CCceEEeeCCCcccHHHHHHHHHHHhCCCCC-eEEEcCCCCcCCCCccccccccccccchhhHhhhhccc
Q 023078          202 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKAAGFPEP-ELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVK  277 (287)
Q Consensus       202 ~~~~~~~---~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  277 (287)
                      +++.+..   .+++||++ +.++|++|+++.+.+.+|.+.+ .+...+.....    ... ......+|++|+++ |||+
T Consensus       248 ~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~----~~~-~~~~~~~d~~k~~~-lG~~  320 (342)
T 2hrz_A          248 GAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIM----RMC-EGWAPGFEAKRARE-LGFT  320 (342)
T ss_dssp             HHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH----HHH-TTSCCCBCCHHHHH-TTCC
T ss_pred             HHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchh----hhh-cccccccChHHHHH-cCCC
Confidence            9987542   46799996 5679999999999999997642 23222211100    000 00001479999998 9999


Q ss_pred             ccc
Q 023078          278 RSM  280 (287)
Q Consensus       278 p~~  280 (287)
                      |..
T Consensus       321 p~~  323 (342)
T 2hrz_A          321 AES  323 (342)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            964

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=3.3e-32  Score=223.68  Aligned_cols=240  Identities=18%  Similarity=0.135  Sum_probs=188.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|++ |++|++++|++...                .+   +.+|++|.+++.++++..++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            6 TGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             ETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999994 89999999986320                12   789999999999999844599999999


Q ss_pred             CCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        81 ~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +...                .++.+++++++  +. +||++||.++|+.... +++|+.+..|.+.| .+|..+|.+++.
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence            8642                34677888876  54 9999999999976543 67888888887778 999999999977


Q ss_pred             cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcc
Q 023078          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       142 ~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~  221 (287)
                        ++++++||+.+||+   ..+...+......+..+...++   .+++++++|+|++++.+++++.  +++||+++ +.+
T Consensus       144 --~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~  212 (273)
T 2ggs_A          144 --DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERI  212 (273)
T ss_dssp             --TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCE
T ss_pred             --CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Ccc
Confidence              88999999999984   4455566666777776655443   7899999999999999998754  45999998 889


Q ss_pred             cHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          222 TFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       222 s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      |++|+++.+.+.+|.+.+........  ..     .+..... .+|++|++++|||+|..
T Consensus       213 s~~e~~~~~~~~~g~~~~~~~~~~~~--~~-----~~~~~~~~~~d~~k~~~~lG~~p~~  265 (273)
T 2ggs_A          213 SRFELALKIKEKFNLPGEVKEVDEVR--GW-----IAKRPYDSSLDSSRARKILSTDFYT  265 (273)
T ss_dssp             EHHHHHHHHHHHTTCCSCEEEESSCT--TC-----CSCCCSBCCBCCHHHHHHCSSCCCS
T ss_pred             cHHHHHHHHHHHhCCChhhccccccc--cc-----ccCCCcccccCHHHHHHHhCCCCCC
Confidence            99999999999999886443221111  01     1111122 78999999999999943

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=2.5e-32  Score=233.53  Aligned_cols=223  Identities=20%  Similarity=0.229  Sum_probs=173.9

Q ss_pred             CCcccchHHHHHHHHHHCC-----CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCC-cc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~d   74 (287)
                      ||||||||++|++.|+++|     ++|++++|+.....  +.          ..+++++.+|++|.+.+.++++..+ +|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            7999999999999999999     99999999876532  11          3578999999999999999998333 99


Q ss_pred             EEEEccCCC-----------ccchHHHHHhCC----CCCcEE-------EEeeeeEeecC--CCCCCCCCCCCCC-Cccc
Q 023078           75 VVYDINGRE-----------ADEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH  129 (287)
Q Consensus        75 ~vi~~a~~~-----------~~~~~~l~~a~~----~~~~~i-------~~Ss~~~y~~~--~~~~~~e~~~~~p-~~~~  129 (287)
                      +|||+|+..           ..++.+++++++    ++++||       |+||.++||..  ...+++|+.+..| .+.|
T Consensus        75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            999999863           345788888876    478997       79999999874  2356777766555 3344


Q ss_pred             cchHHHHHHHH----hcC-CcEEEEccCceecCCCCC--c-hhHH-HHHHH--HcCCCcccCCCCC---ceeeeeeHHHH
Q 023078          130 KGKLNTESVLE----SKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSGI---QVTQLGHVKDL  195 (287)
Q Consensus       130 ~~k~~~E~~~~----~~~-~~~~ilr~~~v~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~~Dv  195 (287)
                         ..+|+++.    +.+ ++++++||+++|||+...  . +... +...+  ..+.++.++++++   ...++++++|+
T Consensus       155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv  231 (364)
T 2v6g_A          155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI  231 (364)
T ss_dssp             ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred             ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence               34566553    355 999999999999997542  1 2233 34444  3677666667663   45788999999


Q ss_pred             HHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCC
Q 023078          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      |++++.+++++...+++||+++++++|+.|+++.+.+.+|.+.
T Consensus       232 a~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~  274 (364)
T 2v6g_A          232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVEC  274 (364)
T ss_dssp             HHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCB
T ss_pred             HHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCC
Confidence            9999999988655678999999989999999999999999875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=4.4e-32  Score=250.28  Aligned_cols=265  Identities=20%  Similarity=0.209  Sum_probs=195.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++|++|++++|+........     ..+.. ...+++++.+|+.+.+.+.++++..++|+|||+
T Consensus        17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999764321100     01110 135788999999999999999876679999999


Q ss_pred             cCCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCC----CCCCCCCCCCCCCccc-cchHHHH
Q 023078           80 NGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~----~~~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      |+...                .++.+++++++  ++++||++||.++||...    ..+.+|+.+..|.+.| .+|.++|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  171 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  171 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence            98642                34677888876  889999999999998532    2456777777777778 9999999


Q ss_pred             HHHHh------cCCcEEEEccCceecCCCC-----------CchhHHHHHHHHc-CCCcccCC------CCCceeeeeeH
Q 023078          137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHV  192 (287)
Q Consensus       137 ~~~~~------~~~~~~ilr~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~  192 (287)
                      .+++.      .+++++++||+++||+...           ..++..+...... +.++.+++      ++++.++|+|+
T Consensus       172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  251 (699)
T 1z45_A          172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  251 (699)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence            98753      5899999999999998521           2334444433332 24555555      57788999999


Q ss_pred             HHHHHHHHHHhcCC------cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccc
Q 023078          193 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIAS  266 (287)
Q Consensus       193 ~Dva~~~~~~~~~~------~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (287)
                      +|+|++++.+++..      ...+++||+++++++|++|+++.+.+.+|.+.+. ...+..   .+      ......+|
T Consensus       252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~---~~------~~~~~~~d  321 (699)
T 1z45_A          252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY-KVTGRR---AG------DVLNLTAK  321 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------------------CCCCCBC
T ss_pred             HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCc-eecCCC---CC------ccccccCC
Confidence            99999999988642      2235799999999999999999999999987532 111110   00      00112789


Q ss_pred             hhhHhhhhcccccc
Q 023078          267 LKTAFSVNMVKRSM  280 (287)
Q Consensus       267 ~~k~~~~lg~~p~~  280 (287)
                      ++|++++|||+|..
T Consensus       322 ~~ka~~~LG~~p~~  335 (699)
T 1z45_A          322 PDRAKRELKWQTEL  335 (699)
T ss_dssp             CHHHHHHTCCCCCC
T ss_pred             HHHHHHhcCCCCCC
Confidence            99999999999964

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=4.8e-32  Score=224.22  Aligned_cols=248  Identities=19%  Similarity=0.206  Sum_probs=184.3

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||+||+++++.|+++  |++|++++|++.+...         +.  ..+++++.+|++|.+.+.++++  ++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------~~--~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA---------LA--AQGITVRQADYGDEAALTSALQ--GVEKLLL   71 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh---------hh--cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999998  9999999998654211         11  2478899999999999999998  8999999


Q ss_pred             ccCC----CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEccC
Q 023078           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        79 ~a~~----~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~~  152 (287)
                      +++.    +..++.+++++++  ++++||++||.++|.             .|..|..+|..+|+++++.+++++++||+
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~~~~~~~~ilrp~  138 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLADSGIVYTLLRNG  138 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHHHcCCCeEEEeCh
Confidence            9985    4567889999987  889999999987751             12223399999999999899999999998


Q ss_pred             ceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHH
Q 023078          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~  232 (287)
                      .++++.     ...+......+ .+. .+.+++.++++|++|+|+++..+++++...+++||+++++.+|+.|+++.+.+
T Consensus       139 ~~~~~~-----~~~~~~~~~~~-~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  211 (286)
T 2zcu_A          139 WYSENY-----LASAPAALEHG-VFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTK  211 (286)
T ss_dssp             CBHHHH-----HTTHHHHHHHT-EEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHH
T ss_pred             HHhhhh-----HHHhHHhhcCC-cee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHH
Confidence            766652     11122222233 333 34567789999999999999999987655678999999989999999999999


Q ss_pred             HhCCCCCeEEEcCCCCcCC-----CCcc-ccc--------cccc-cccchhhHhhhhccccccee
Q 023078          233 AAGFPEPELVHYNPKEFDF-----GKKK-AFP--------FRDQ-VIASLKTAFSVNMVKRSMLA  282 (287)
Q Consensus       233 ~~g~~~~~~~~~~~~~~~~-----~~~~-~~~--------~~~~-~~~~~~k~~~~lg~~p~~~~  282 (287)
                      .+|.+. .+...+...+..     +... ...        .... ...|++|+++.|||.|..+.
T Consensus       212 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~  275 (286)
T 2zcu_A          212 QSGKQV-TYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLA  275 (286)
T ss_dssp             HHSSCC-EEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHH
T ss_pred             HHCCCC-ceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHH
Confidence            999876 666665433210     1000 000        0001 15678999999998766543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=5.6e-32  Score=223.96  Aligned_cols=247  Identities=17%  Similarity=0.147  Sum_probs=185.1

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||+++++.|+++  |++|++++|++.+...         +.  ..+++++.+|++|.+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST---------LA--DQGVEVRHGDYNQPESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH---------Hh--hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999998  9999999998654211         11  2578899999999999999998  8999999


Q ss_pred             ccCC------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEc
Q 023078           79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (287)
Q Consensus        79 ~a~~------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr  150 (287)
                      +++.      |..++.+++++++  ++++||++||.++|.             .|..|..+|..+|+++++.+++++++|
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~~K~~~E~~~~~~~~~~~ilr  139 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SIIPLAHVHLATEYAIRTTNIPYTFLR  139 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CCSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CCCchHHHHHHHHHHHHHcCCCeEEEE
Confidence            9986      4456788999986  889999999987752             122233999999999999999999999


Q ss_pred             cCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHH
Q 023078          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC  230 (287)
Q Consensus       151 ~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i  230 (287)
                      |+.++|+.. ..+   +...+..+...  ...+++.++++|++|+|+++..+++++...+++||+++++.+|+.|+++.+
T Consensus       140 p~~~~~~~~-~~~---~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i  213 (287)
T 2jl1_A          140 NALYTDFFV-NEG---LRASTESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQIL  213 (287)
T ss_dssp             ECCBHHHHS-SGG---GHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHH
T ss_pred             CCEeccccc-hhh---HHHHhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHH
Confidence            999888631 112   22223334332  234567889999999999999999876556789999999899999999999


Q ss_pred             HHHhCCCCCeEEEcCCCCcCC-----CCcc-ccc--------ccccc-ccchhhHhhhhcccccce
Q 023078          231 AKAAGFPEPELVHYNPKEFDF-----GKKK-AFP--------FRDQV-IASLKTAFSVNMVKRSML  281 (287)
Q Consensus       231 ~~~~g~~~~~~~~~~~~~~~~-----~~~~-~~~--------~~~~~-~~~~~k~~~~lg~~p~~~  281 (287)
                      .+.+|.+. .+...+...+..     +.+. ...        ..... ..|++|+++.|| .|..+
T Consensus       214 ~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~~~l  277 (287)
T 2jl1_A          214 SEVSGKKV-VHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPL  277 (287)
T ss_dssp             HHHHSSCC-EEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-SCCCH
T ss_pred             HHHHCCcc-eEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-CCCCH
Confidence            99999875 555555432210     1000 000        00011 567889999999 55443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=6.1e-32  Score=229.08  Aligned_cols=255  Identities=13%  Similarity=0.052  Sum_probs=186.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEE-EecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++|++++|+..+... +.    ..+.. ...+++++ .+|++|.+.+.++++  ++|+|||
T Consensus        17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   89 (342)
T 1y1p_A           17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQ----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH   89 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH-HH----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999997654211 10    00000 02468888 899999999999998  8999999


Q ss_pred             ccCCC-------------ccchHHHHHhCC---CCCcEEEEeeeeEeecCCC----CCCCCCCC----------------
Q 023078           79 INGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----LPHCETDT----------------  122 (287)
Q Consensus        79 ~a~~~-------------~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~----~~~~e~~~----------------  122 (287)
                      +|+..             ..++.++++++.   ++++||++||.++|+....    .+++|+..                
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            99863             345778888864   6799999999998864321    35666552                


Q ss_pred             CCCCccc-cchHHHHHHHHhc------CCcEEEEccCceecCCCCC----chhHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          123 VDPKSRH-KGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~~~------~~~~~ilr~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      ..|.+.| .+|..+|.+++..      +++++++||+++|||....    .....++..+..+++..++++. +.++++|
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence            2344567 9999999987432      7889999999999997532    2566777788888776544444 6789999


Q ss_pred             HHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHh
Q 023078          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAF  271 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  271 (287)
                      ++|+|++++.+++++...++.+. .++.++|+.|+++.+.+.+|.+. .  ..+..     ..    ......+|++|++
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~~-~~g~~~s~~e~~~~i~~~~~~~~-~--~~~~~-----~~----~~~~~~~d~~k~~  315 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRVY-GTAGTFDWNTVLATFRKLYPSKT-F--PADFP-----DQ----GQDLSKFDTAPSL  315 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEE-ECCEEECHHHHHHHHHHHCTTSC-C--CCCCC-----CC----CCCCCEECCHHHH
T ss_pred             HHHHHHHHHHHHcCcccCCceEE-EeCCCCCHHHHHHHHHHHCCCcc-C--CCCCC-----cc----ccccccCChHHHH
Confidence            99999999999987544455454 45667999999999999999651 1  11100     00    0011267999999


Q ss_pred             hhhcc
Q 023078          272 SVNMV  276 (287)
Q Consensus       272 ~~lg~  276 (287)
                      +.|||
T Consensus       316 ~~lg~  320 (342)
T 1y1p_A          316 EILKS  320 (342)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            99987

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.97  E-value=1.6e-31  Score=238.11  Aligned_cols=250  Identities=13%  Similarity=0.058  Sum_probs=174.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+..+.                   ..+.+|+.+.  +.++++  ++|+|||+|
T Consensus       153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------------~~v~~d~~~~--~~~~l~--~~D~Vih~A  209 (516)
T 3oh8_A          153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------------GKRFWDPLNP--ASDLLD--GADVLVHLA  209 (516)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------------TCEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------------cceeecccch--hHHhcC--CCCEEEECC
Confidence            79999999999999999999999999986652                   1146677543  355666  899999999


Q ss_pred             CCC-----------------ccchHHHHHh-CC--CCCcEEEEeeeeEee-cCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           81 GRE-----------------ADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        81 ~~~-----------------~~~~~~l~~a-~~--~~~~~i~~Ss~~~y~-~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      +..                 ..++.+++++ ++  ++++|||+||.++|| .....+++|+.+. |.++| ..|...|.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~  288 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA  288 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence            863                 3347888888 43  789999999999998 4444456777665 66666 677777765


Q ss_pred             H---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEe
Q 023078          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  215 (287)
Q Consensus       139 ~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~  215 (287)
                      +   +..+++++++||+++|||+.  .++..+...+..+.. ...+++++.++|+|++|+|++++.+++++. .+++||+
T Consensus       289 ~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ni  364 (516)
T 3oh8_A          289 TAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-ISGPINA  364 (516)
T ss_dssp             THHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT-CCEEEEE
T ss_pred             HHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc-cCCcEEE
Confidence            4   46799999999999999963  445555554444443 345788899999999999999999998865 4568999


Q ss_pred             eCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCC--CCcccccccc-ccccchhhHhhhhcccccce
Q 023078          216 SGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDF--GKKKAFPFRD-QVIASLKTAFSVNMVKRSML  281 (287)
Q Consensus       216 ~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~k~~~~lg~~p~~~  281 (287)
                      ++++++|+.|+++.+.+.+|.+.  ....+....+.  +......... ....+++|++ +|||+|.+.
T Consensus       365 ~~~~~~s~~el~~~i~~~~g~~~--~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~  430 (516)
T 3oh8_A          365 VAPNPVSNADMTKILATSMHRPA--FIQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYT  430 (516)
T ss_dssp             SCSCCEEHHHHHHHTTC-----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCS
T ss_pred             ECCCCCCHHHHHHHHHHHhCCCC--CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCC
Confidence            99999999999999999999764  23334333221  1110011111 1167888988 599999864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=4.8e-31  Score=218.58  Aligned_cols=251  Identities=15%  Similarity=0.131  Sum_probs=185.5

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||+||+++++.|+++ |++|++++|++++.....           ..+++++.+|++|++.+.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence            799999999999999998 999999999877632221           3689999999999999999998  99999999


Q ss_pred             cCCC------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEcc
Q 023078           80 NGRE------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (287)
Q Consensus        80 a~~~------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~  151 (287)
                      ++..      ...+.+++++++  ++++||++||.+.   ..         ..|......+..+|..+++.+++++++||
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~---------~~~~~~~~~~~~~e~~~~~~g~~~~ilrp  140 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QH---------NNPFHMSPYFGYASRLLSTSGIDYTYVRM  140 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---ST---------TCCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CC---------CCCCccchhHHHHHHHHHHcCCCEEEEec
Confidence            9864      345788899887  8899999999542   11         11111223345788888889999999999


Q ss_pred             CceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHH
Q 023078          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (287)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~  231 (287)
                      +.+||+.     ..++ ......... ..+.++..+++++++|+|+++..++.++...+++||++ ++.+|+.|+++.+.
T Consensus       141 ~~~~~~~-----~~~~-~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~  212 (289)
T 3e48_A          141 AMYMDPL-----KPYL-PELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILS  212 (289)
T ss_dssp             CEESTTH-----HHHH-HHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHH
T ss_pred             ccccccc-----HHHH-HHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHH
Confidence            9999982     2222 233332322 23556788999999999999999999876568899999 99999999999999


Q ss_pred             HHhCCCCCeEEEcCCCCcCCC--C-ccccc--------ccccc-ccchhhHhhhhcccccceeeee
Q 023078          232 KAAGFPEPELVHYNPKEFDFG--K-KKAFP--------FRDQV-IASLKTAFSVNMVKRSMLAFYI  285 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~~~~~~--~-~~~~~--------~~~~~-~~~~~k~~~~lg~~p~~~~~~~  285 (287)
                      +.+|++. .+...+...+...  . .....        ..... ..+...+.+.+|++|..+..|+
T Consensus       213 ~~~g~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~  277 (289)
T 3e48_A          213 EASGTEI-KYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFL  277 (289)
T ss_dssp             HHHTSCC-EECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCCHHHHH
T ss_pred             HHHCCce-eEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCCHHHHH
Confidence            9999875 5555544332100  0 00000        00011 3456678888999998887664

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1e-30  Score=209.12  Aligned_cols=201  Identities=19%  Similarity=0.175  Sum_probs=158.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|++++.. .+           ..+++++.+|++|.+++.++++  ++|+|||++
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A           10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKIK-IE-----------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC-CC-----------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEEcCcccch-hc-----------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence            799999999999999999999999999876632 22           2588999999999999999998  899999999


Q ss_pred             CCC----------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH---H-hcC
Q 023078           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG  143 (287)
Q Consensus        81 ~~~----------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~---~-~~~  143 (287)
                      +..          ..++.+++++++  ++++||++||.++|+.... ...++.+..|.+.| .+|..+|.++   . +.+
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  154 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-LRLMDSGEVPENILPGVKALGEFYLNFLMKEKE  154 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-EEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-CccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence            873          456888999987  8899999999987654433 23445566777888 9999999654   3 568


Q ss_pred             CcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccH
Q 023078          144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF  223 (287)
Q Consensus       144 ~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~  223 (287)
                      ++++++||+.+|||+......       ..+....+.. ++. ++++|++|+|++++.+++++...+++|+++++++.++
T Consensus       155 ~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          155 IDWVFFSPAADMRPGVRTGRY-------RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             SEEEEEECCSEEESCCCCCCC-------EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred             ccEEEEeCCcccCCCccccce-------eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence            999999999999997543221       1122222222 222 7999999999999999999888899999999998887


Q ss_pred             HH
Q 023078          224 DG  225 (287)
Q Consensus       224 ~~  225 (287)
                      .+
T Consensus       226 ~~  227 (227)
T 3dhn_A          226 HH  227 (227)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4.3e-30  Score=226.80  Aligned_cols=237  Identities=16%  Similarity=0.168  Sum_probs=176.2

Q ss_pred             CCcccchHHHHHHHHHHC---CCeEEEEecCCccccc------cCCCCC---chhh-hhhcCCcEEEEecCC------Ch
Q 023078            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIAQ------QLPGES---DQEF-AEFSSKILHLKGDRK------DY   61 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g~~V~~l~r~~~~~~~------~~~~~~---~~~~-~~~~~~~~~~~~d~~------~~   61 (287)
                      ||||||||++|++.|+++   |++|++++|+......      .+....   ...+ .....+++++.+|++      +.
T Consensus        79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~  158 (478)
T 4dqv_A           79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ  158 (478)
T ss_dssp             ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred             ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence            799999999999999998   8999999998764210      110000   0000 011368999999998      66


Q ss_pred             HHHHhhhccCCccEEEEccCC------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           62 DFVKSSLSAKGFDVVYDINGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        62 ~~~~~~~~~~~~d~vi~~a~~------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +.+.++++  ++|+|||+|+.            |+.++.++++++.  ++++|||+||.++|+.....+++|+....|.+
T Consensus       159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~  236 (478)
T 4dqv_A          159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS  236 (478)
T ss_dssp             HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred             HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence            78999998  89999999986            3446888999977  78899999999999876666777776544433


Q ss_pred             c-----------c-cchHHHHHHHHh----cCCcEEEEccCceecCCCC------CchhHHHHHHHHcCCCcc--cCCC-
Q 023078          128 R-----------H-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------NPVEEWFFHRLKAGRPIP--IPGS-  182 (287)
Q Consensus       128 ~-----------~-~~k~~~E~~~~~----~~~~~~ilr~~~v~g~~~~------~~~~~~~~~~~~~~~~~~--~~~~-  182 (287)
                      .           | .+|+.+|.++++    .+++++++||++|||+...      ..++..++......+..+  ++.. 
T Consensus       237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~  316 (478)
T 4dqv_A          237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD  316 (478)
T ss_dssp             CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence            2           6 999999998864    5999999999999998531      223334444333322221  1111 


Q ss_pred             -----CCceeeeeeHHHHHHHHHHHhcC----CcCCCceEEeeCCCc--ccHHHHHHHHHHHhCCCCCe
Q 023078          183 -----GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKAAGFPEPE  240 (287)
Q Consensus       183 -----~~~~~~~i~~~Dva~~~~~~~~~----~~~~~~~~~~~~~~~--~s~~~i~~~i~~~~g~~~~~  240 (287)
                           +++.++++|++|+|++++.++.+    +...+++||++++++  +|+.|+++.+.+. |.+.+.
T Consensus       317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~  384 (478)
T 4dqv_A          317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRR  384 (478)
T ss_dssp             TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEE
T ss_pred             cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCccc
Confidence                 25788999999999999999876    445678999999988  9999999999995 777633

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.2e-29  Score=215.51  Aligned_cols=232  Identities=15%  Similarity=0.175  Sum_probs=179.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++|++.|+++|++|++++|++........  ....+  ...+++++.+|+.|.+++.++++..++|+|||++
T Consensus        16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~~~l--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a   91 (346)
T 3i6i_A           16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK--IFKAL--EDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTV   91 (346)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH--HHHHH--HHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH--HHHHH--HhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECC
Confidence            7999999999999999999999999998732111110  00011  1368999999999999999999877899999999


Q ss_pred             CC-CccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcEEEEccCcee
Q 023078           81 GR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        81 ~~-~~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~~ilr~~~v~  155 (287)
                      +. +..++.+++++++  + +++||+ |   +||.    ..+|..+..|...| .+|+.+|+++++.+++++++||+.++
T Consensus        92 ~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~  163 (346)
T 3i6i_A           92 GGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIA  163 (346)
T ss_dssp             CGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEES
T ss_pred             chhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEecccc
Confidence            87 7788999999987  7 899986 4   3442    23445555666666 99999999999999999999999999


Q ss_pred             cCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeC-CCcccHHHHHHHHHHHh
Q 023078          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKAA  234 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~i~~~i~~~~  234 (287)
                      |........  .......+..+.++++++..++|++++|+|++++.++..+...+++|++.+ ++.+|+.|+++.+.+.+
T Consensus       164 g~~~~~~~~--~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~  241 (346)
T 3i6i_A          164 SWPYYNNIH--PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKI  241 (346)
T ss_dssp             SCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHH
T ss_pred             cccCccccc--cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHH
Confidence            975322111  011112445566778888999999999999999999998766678999985 47899999999999999


Q ss_pred             CCCCCeEEEcCCC
Q 023078          235 GFPEPELVHYNPK  247 (287)
Q Consensus       235 g~~~~~~~~~~~~  247 (287)
                      |++. .+...+..
T Consensus       242 g~~~-~~~~~~~~  253 (346)
T 3i6i_A          242 GRTL-PRVTVTED  253 (346)
T ss_dssp             TSCC-CEEEECHH
T ss_pred             CCCC-ceEecCHH
Confidence            9886 55555544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=7.4e-30  Score=222.66  Aligned_cols=228  Identities=17%  Similarity=0.185  Sum_probs=173.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc--cCCCCCch-----hhhhhcCCcEEEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      |||||+||++|++.|+++|++|++++|++.....  .+......     .......+++++.+|+++.+.+. .+.  ++
T Consensus        75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  151 (427)
T 4f6c_A           75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  151 (427)
T ss_dssp             ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred             ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence            7999999999999999999999999998873110  00000000     00111368999999999987777 555  99


Q ss_pred             cEEEEccCCC-------------ccchHHHHHhCC-CCCcEEEEeeeeEeec-----CCCCCCCCCCC---CCCCccc-c
Q 023078           74 DVVYDINGRE-------------ADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (287)
Q Consensus        74 d~vi~~a~~~-------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~-----~~~~~~~e~~~---~~p~~~~-~  130 (287)
                      |+|||+|+..             +.++.++++++. ++++||++||.++ |.     ....+++|+.+   ..|.+.| .
T Consensus       152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  230 (427)
T 4f6c_A          152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  230 (427)
T ss_dssp             SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred             CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence            9999999863             345788888887 8899999999998 43     23345677765   3466667 9


Q ss_pred             chHHHHHHHHh---cCCcEEEEccCceecCCCCCc--------hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       131 ~k~~~E~~~~~---~~~~~~ilr~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      +|+.+|.++++   .+++++++||++|||+.....        ++..+++....+..++. +.++..++|++++|+|+++
T Consensus       231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai  309 (427)
T 4f6c_A          231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  309 (427)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHH
Confidence            99999999865   799999999999999975432        24456666666666544 3357889999999999999


Q ss_pred             HHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhC
Q 023078          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g  235 (287)
                      +.++..+. .+++||+++++++++.|+++.+.+ +|
T Consensus       310 ~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          310 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             HHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             HHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            99998876 788999999999999999999998 66

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=9.5e-30  Score=226.53  Aligned_cols=229  Identities=17%  Similarity=0.208  Sum_probs=175.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc--cCCCCCch-----hhhhhcCCcEEEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      ||||||||++|++.|+++|++|++++|+......  .+......     .......+++++.+|+.+.+.+. ++.  ++
T Consensus       156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  232 (508)
T 4f6l_B          156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  232 (508)
T ss_dssp             SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred             ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence            7999999999999999889999999998873110  00000000     00112468999999999977776 555  99


Q ss_pred             cEEEEccCC-------------CccchHHHHHhCC-CCCcEEEEeeeeE--eec--CCCCCCCCCCC---CCCCccc-cc
Q 023078           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGV--YLK--SDLLPHCETDT---VDPKSRH-KG  131 (287)
Q Consensus        74 d~vi~~a~~-------------~~~~~~~l~~a~~-~~~~~i~~Ss~~~--y~~--~~~~~~~e~~~---~~p~~~~-~~  131 (287)
                      |+|||+|+.             |+.++.+++++++ +.++|||+||.++  |..  ....+++|+.+   ..|.+.| .+
T Consensus       233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~s  312 (508)
T 4f6l_B          233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRS  312 (508)
T ss_dssp             SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHH
T ss_pred             CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHH
Confidence            999999986             3446788999887 7899999999998  322  23345677665   3356667 99


Q ss_pred             hHHHHHHHHh---cCCcEEEEccCceecCCCCCc--------hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          132 KLNTESVLES---KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       132 k~~~E~~~~~---~~~~~~ilr~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      |+.+|+++++   .+++++++||+++||+.....        .+..+++.......++. +.+++.++|++++|+|++++
T Consensus       313 K~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~  391 (508)
T 4f6l_B          313 KFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIV  391 (508)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHH
Confidence            9999999864   799999999999999975432        24456666666665554 34678999999999999999


Q ss_pred             HHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHh
Q 023078          201 QVLGNEKASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~  234 (287)
                      .++..+. .+++||+++++++++.|+++.+.+..
T Consensus       392 ~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          392 ALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             HHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            9998876 77899999999999999999998764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.96  E-value=1.1e-29  Score=215.10  Aligned_cols=258  Identities=19%  Similarity=0.224  Sum_probs=172.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+..... ...  ....+. ...+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~-~~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   88 (338)
T 2rh8_A           15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK-KVS--HLLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA   88 (338)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTT-TTH--HHHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhh-hHH--HHHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence            799999999999999999999999999765311 000  000111 12468899999999999999998  899999998


Q ss_pred             CCC---------------ccchHHHHHhCC--C-CCcEEEEeeee-EeecC---CCCCCCCCCCC--------CC-Cccc
Q 023078           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKS---DLLPHCETDTV--------DP-KSRH  129 (287)
Q Consensus        81 ~~~---------------~~~~~~l~~a~~--~-~~~~i~~Ss~~-~y~~~---~~~~~~e~~~~--------~p-~~~~  129 (287)
                      +..               ..++.++++++.  + ++||||+||.+ +|+..   ...+++|+...        .| .+.|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            752               124677888865  4 89999999987 44321   11245565421        11 1236


Q ss_pred             -cchHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHH--HHHHHcCCCcccCCC------CCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGS------GIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~i~~~Dva  196 (287)
                       .+|..+|.++.    +.+++++++||+++|||+........+  +.....+....+ +.      +...++|+|++|+|
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI-NGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccc-ccccccccccCcccEEEHHHHH
Confidence             99999998763    358999999999999997543221111  111233332211 10      11235899999999


Q ss_pred             HHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCC-CCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhc
Q 023078          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGF-PEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNM  275 (287)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  275 (287)
                      ++++.+++++. .++.|++++ ..+|++|+++.+.+.++. +.|.      .   +...   +......+|++|+ ++||
T Consensus       248 ~a~~~~~~~~~-~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~------~---~~~~---~~~~~~~~d~~k~-~~lG  312 (338)
T 2rh8_A          248 RAHIFVAEKES-ASGRYICCA-ANTSVPELAKFLSKRYPQYKVPT------D---FGDF---PPKSKLIISSEKL-VKEG  312 (338)
T ss_dssp             HHHHHHHHCTT-CCEEEEECS-EEECHHHHHHHHHHHCTTSCCCC------C---CTTS---CSSCSCCCCCHHH-HHHT
T ss_pred             HHHHHHHcCCC-cCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCC------C---CCCC---CcCcceeechHHH-HHhC
Confidence            99999998754 345788875 469999999999998763 2211      0   0000   0000126799999 6799


Q ss_pred             ccccc
Q 023078          276 VKRSM  280 (287)
Q Consensus       276 ~~p~~  280 (287)
                      |+|.+
T Consensus       313 ~~p~~  317 (338)
T 2rh8_A          313 FSFKY  317 (338)
T ss_dssp             CCCSC
T ss_pred             CCCCC
Confidence            99975

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.96  E-value=6.9e-29  Score=210.03  Aligned_cols=257  Identities=18%  Similarity=0.185  Sum_probs=172.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc--ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++|++++|+.....  ..+..     +.....+++++.+|++|.+.+.++++  ++|+|||
T Consensus        11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   83 (337)
T 2c29_D           11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-----LPKAETHLTLWKADLADEGSFDEAIK--GCTGVFH   83 (337)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-----STTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-----cccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence            899999999999999999999999999865311  00000     00001357889999999999999998  8999999


Q ss_pred             ccCCC---------------ccchHHHHHhCC--C-CCcEEEEeeee-EeecCC-CCCCCCCCCC---------CCCccc
Q 023078           79 INGRE---------------ADEVEPILDALP--N-LEQFIYCSSAG-VYLKSD-LLPHCETDTV---------DPKSRH  129 (287)
Q Consensus        79 ~a~~~---------------~~~~~~l~~a~~--~-~~~~i~~Ss~~-~y~~~~-~~~~~e~~~~---------~p~~~~  129 (287)
                      +|+..               ..++.++++++.  + ++||||+||.+ +|+... ..+.+|+...         .|.+.|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            99752               124677888876  5 89999999987 454322 2234554321         133446


Q ss_pred             -cchHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHHHHH--HHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 -~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                       .+|..+|.++.    +.+++++++||+++|||.....+...+...  ...+.... ++.. ....|+|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAH-YSII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGG-HHHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcc-cccc-CCCCEEEHHHHHHHHHHH
Confidence             99999998763    468999999999999997543322222111  12333221 1111 234599999999999999


Q ss_pred             hcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCC-CCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          203 LGNEKASRQVFNISGEKYVTFDGLARACAKAAGF-PEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      ++++.. ++.|++++ ..+|++|+++.+.+.++. +.|.      .   +....  .......+|++|+ ++|||+|.+
T Consensus       242 ~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~------~---~~~~~--~~~~~~~~d~~k~-~~lG~~p~~  306 (337)
T 2c29_D          242 FENPKA-EGRYICSS-HDCIILDLAKMLREKYPEYNIPT------E---FKGVD--ENLKSVCFSSKKL-TDLGFEFKY  306 (337)
T ss_dssp             HHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCTTSCCCS------C---CTTCC--TTCCCCEECCHHH-HHHTCCCCC
T ss_pred             hcCccc-CceEEEeC-CCCCHHHHHHHHHHHCCCccCCC------C---CCccc--CCCccccccHHHH-HHcCCCcCC
Confidence            987543 45787654 569999999999998753 2211      0   01000  0001116899999 789999974

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=2.5e-29  Score=215.30  Aligned_cols=190  Identities=17%  Similarity=0.170  Sum_probs=162.4

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++|+ +|++++|+                              .|.+.+.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~   53 (369)
T 3st7_A            6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL   53 (369)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence            79999999999999999998 87777663                              46788888888  89999999


Q ss_pred             cCC------------CccchHHHHHhCC--CCC-cEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh--
Q 023078           80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES--  141 (287)
Q Consensus        80 a~~------------~~~~~~~l~~a~~--~~~-~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~--  141 (287)
                      |+.            |..++.+++++++  +++ +|||+||.++|+               .+.| .+|..+|+++++  
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E~~~~~~~  118 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYA  118 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHHHHHHHHH
Confidence            985            4556889999987  666 999999999875               2345 999999998865  


Q ss_pred             --cCCcEEEEccCceecCCCC---CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC-CceEEe
Q 023078          142 --KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNI  215 (287)
Q Consensus       142 --~~~~~~ilr~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-~~~~~~  215 (287)
                        .+++++++||+++||++..   ..++..++..+..+.++.+ .++++.++++|++|+|++++.+++++... +++||+
T Consensus       119 ~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i  197 (369)
T 3st7_A          119 EEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV  197 (369)
T ss_dssp             HHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECC
T ss_pred             HHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEe
Confidence              7899999999999999754   3567778888888887766 46788999999999999999999987643 789999


Q ss_pred             eCCCcccHHHHHHHHHHHhCCCC
Q 023078          216 SGEKYVTFDGLARACAKAAGFPE  238 (287)
Q Consensus       216 ~~~~~~s~~~i~~~i~~~~g~~~  238 (287)
                      ++++.+|+.|+++.+.+.+|.+.
T Consensus       198 ~~~~~~s~~e~~~~~~~~~g~~~  220 (369)
T 3st7_A          198 PNVFKVTLGEIVDLLYKFKQSRL  220 (369)
T ss_dssp             SCCEEEEHHHHHHHHHHHHHHHH
T ss_pred             CCCCceeHHHHHHHHHHHhCCCc
Confidence            99999999999999999999763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.96  E-value=1.6e-28  Score=206.42  Aligned_cols=260  Identities=18%  Similarity=0.185  Sum_probs=170.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEec-CCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||+++++.|+++|++|++++| ++.... ....  ...+.....+++++.+|++|.+.+.++++  ++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~   81 (322)
T 2p4h_X            7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKR-DVSF--LTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT   81 (322)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCCC----C-CCHH--HHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred             ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchh-HHHH--HHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence            799999999999999999999999998 542210 0000  00000001257788999999999999998  89999999


Q ss_pred             cCCC---------------ccchHHHHHhCC---CCCcEEEEeeeeEe-ecCC-CCCCCCCCCC--------CCCc-cc-
Q 023078           80 NGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY-LKSD-LLPHCETDTV--------DPKS-RH-  129 (287)
Q Consensus        80 a~~~---------------~~~~~~l~~a~~---~~~~~i~~Ss~~~y-~~~~-~~~~~e~~~~--------~p~~-~~-  129 (287)
                      |+..               ..++.++++++.   ++++||++||.+++ +... ..+++|+...        .|.. .| 
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            8642               224677888865   47899999998743 3322 2234554321        2232 36 


Q ss_pred             cchHHHHHHHH----hcCCcEEEEccCceecCCCCCchhHHH--HHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWF--FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      .+|..+|.++.    +.+++++++||+++|||.........+  ......+....+ +.  ..++++|++|+|++++.++
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHh
Confidence            99999998764    368999999999999997533221111  112233443332 22  3358999999999999999


Q ss_pred             cCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +++...+ .|| .++.++|+.|+++.+.+.++...     .+... .+...  .+ .....+|++|+ ++|||+|.+
T Consensus       239 ~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~~~~-----~~~~~-~~~~~--~~-~~~~~~d~~k~-~~lG~~p~~  303 (322)
T 2p4h_X          239 ENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYPEYQ-----ILTVD-ELKEI--KG-ARLPDLNTKKL-VDAGFDFKY  303 (322)
T ss_dssp             HSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCTTSC-----CCCTT-TTTTC--CC-EECCEECCHHH-HHTTCCCCC
T ss_pred             hCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCCCCC-----CCCCc-cccCC--CC-CcceecccHHH-HHhCCccCC
Confidence            7654344 588 55678999999999998875211     11110 01110  00 11127899999 669999974

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=1.3e-29  Score=201.50  Aligned_cols=193  Identities=15%  Similarity=0.175  Sum_probs=158.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||+||+++++.|+++|++|++++|++.+...             ..+++++.+|++| .+++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~   70 (219)
T 3dqp_A            6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------YNNVKAVHFDVDWTPEEMAKQLH--GMDAIINV   70 (219)
T ss_dssp             ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------CTTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------cCCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence            7999999999999999999999999998765321             1578999999999 999999998  89999999


Q ss_pred             cCC--------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH-HhcCCcEE
Q 023078           80 NGR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-ESKGVNWT  147 (287)
Q Consensus        80 a~~--------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~-~~~~~~~~  147 (287)
                      ++.        |..++.+++++++  ++++||++||.++++..   +..| .+..|.+.| .+|..+|+++ +..+++++
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~  146 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT  146 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence            986        3456888999987  78999999998766432   2233 333445567 9999999999 78899999


Q ss_pred             EEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHH
Q 023078          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       148 ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~  227 (287)
                      ++||+.+||+...+.+.              +   ++..+++++++|+|++++.+++++...+++||++++. .+++|++
T Consensus       147 ilrp~~v~g~~~~~~~~--------------~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~  208 (219)
T 3dqp_A          147 IIQPGALTEEEATGLID--------------I---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEAL  208 (219)
T ss_dssp             EEEECSEECSCCCSEEE--------------E---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHH
T ss_pred             EEeCceEecCCCCCccc--------------c---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHH
Confidence            99999999985433221              1   2567899999999999999999877678999998875 9999887


Q ss_pred             HHH
Q 023078          228 RAC  230 (287)
Q Consensus       228 ~~i  230 (287)
                      +.-
T Consensus       209 ~~~  211 (219)
T 3dqp_A          209 ESL  211 (219)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.95  E-value=3.6e-28  Score=193.36  Aligned_cols=200  Identities=18%  Similarity=0.238  Sum_probs=133.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|++++....            ..+++++.+|++|.+.  +.+.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   69 (221)
T 3ew7_A            6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT------------HKDINILQKDIFDLTL--SDLS--DQNVVVDAY   69 (221)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH------------CSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc------------cCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence            79999999999999999999999999987663211            1578999999999877  6777  899999999


Q ss_pred             CCC-------ccchHHHHHhCC--CCCcEEEEeeeeEeec-CCCCCCCCCCCCCCCccc-cchHHHHHH--HH--hcCCc
Q 023078           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN  145 (287)
Q Consensus        81 ~~~-------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~--~~--~~~~~  145 (287)
                      +..       ...+.+++++++  +++++|++||.++|.. ....+..++.+..|.+.| .+|...|.+  +.  +.+++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~  149 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS  149 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            874       345788999987  6899999999876543 333345556666677777 888888876  55  68999


Q ss_pred             EEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHHH
Q 023078          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       146 ~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  225 (287)
                      ++++||+.+||++.....   +   ...+..+.+.+++   .++++++|+|++++.+++++...++.||++++.+.+..|
T Consensus       150 ~~ivrp~~v~g~~~~~~~---~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          150 WTYISPSAMFEPGERTGD---Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             EEEEeCcceecCCCccCc---e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999999999998432111   0   0112223333332   379999999999999999988789999999988776654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=4.3e-28  Score=203.02  Aligned_cols=232  Identities=13%  Similarity=0.147  Sum_probs=170.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc-cccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||++|+++++.|+++|++|++++|+.+.. .+..     ..+.. ...+++++.+|+.|.+++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   82 (313)
T 1qyd_A           10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV-----QMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVIS   82 (313)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH-----HHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHH-----HHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEE
Confidence            79999999999999999999999999986431 0000     00000 13578999999999999999998  8999999


Q ss_pred             ccCC-----CccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC-CccccchHHHHHHHHhcCCcEEEE
Q 023078           79 INGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        79 ~a~~-----~~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      +++.     +...+.+++++++  + ++|||+ |   +||......   +.+..| .+.|.+|..+|+++++.+++++++
T Consensus        83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~il  155 (313)
T 1qyd_A           83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYV  155 (313)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEE
T ss_pred             CCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEE
Confidence            9986     4567899999987  6 899985 3   455322211   122234 334699999999999999999999


Q ss_pred             ccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCC-CcccHHHHHH
Q 023078          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLAR  228 (287)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~i~~  228 (287)
                      ||+.++|+.... +..........++.+.++++++..+++++++|+|+++..+++++...++.|++.++ +.+|+.|+++
T Consensus       156 rp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~  234 (313)
T 1qyd_A          156 SSNMFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQ  234 (313)
T ss_dssp             ECCEEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHH
T ss_pred             Eeceeccccccc-cccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHH
Confidence            999988853111 00000000123344555677788999999999999999999887656778888765 6799999999


Q ss_pred             HHHHHhCCCCCeEEEcCCCC
Q 023078          229 ACAKAAGFPEPELVHYNPKE  248 (287)
Q Consensus       229 ~i~~~~g~~~~~~~~~~~~~  248 (287)
                      .+.+.+|++. .+...+...
T Consensus       235 ~~~~~~g~~~-~~~~~~~~~  253 (313)
T 1qyd_A          235 IWERLSEQNL-DKIYISSQD  253 (313)
T ss_dssp             HHHHHHTCCC-EECCBCSHH
T ss_pred             HHHHhcCCCC-ceEECCHHH
Confidence            9999999876 566565433

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=6.4e-28  Score=202.47  Aligned_cols=225  Identities=19%  Similarity=0.239  Sum_probs=170.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|+++++.|+++|++|++++|+++.....+     ..+.  ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~l~--~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-----DEFQ--SLGAIIVKGELDEHEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-----HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-----HHhh--cCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            699999999999999999999999999875211110     0011  3578999999999999999998  899999999


Q ss_pred             CCC-ccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC-CccccchHHHHHHHHhcCCcEEEEccCcee
Q 023078           81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        81 ~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~ilr~~~v~  155 (287)
                      +.. ...+.+++++++  + +++||+ |   +||...    ++.....| ...|.+|..+|+++++.+++++++||+.++
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~  159 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA  159 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence            864 567889999987  6 899984 4   344321    22222333 234689999999999999999999999877


Q ss_pred             cCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCC-CcccHHHHHHHHHHHh
Q 023078          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKAA  234 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~i~~~i~~~~  234 (287)
                      +.     +.+.+......+..+.++++++..+++++++|+|+++..+++++...++.|++.++ +.+|+.|+++.+.+.+
T Consensus       160 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  234 (318)
T 2r6j_A          160 SY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI  234 (318)
T ss_dssp             HH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred             hh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHh
Confidence            64     22222222223444555677788999999999999999999886555778888754 7799999999999999


Q ss_pred             CCCCCeEEEcCCCC
Q 023078          235 GFPEPELVHYNPKE  248 (287)
Q Consensus       235 g~~~~~~~~~~~~~  248 (287)
                      |++. .+...+...
T Consensus       235 g~~~-~~~~~~~~~  247 (318)
T 2r6j_A          235 GKKF-KKIHVPEEE  247 (318)
T ss_dssp             TCCC-EEEEECHHH
T ss_pred             CCCC-ceeecCHHH
Confidence            9886 666665443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=9.2e-28  Score=203.40  Aligned_cols=206  Identities=17%  Similarity=0.238  Sum_probs=166.4

Q ss_pred             CCcccchHHHHHHHHHHC-CC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||+||+++++.|+++ |+ +|++++|++.+.....     ..+.  ..+++++.+|++|.+.+.++++  ++|+|||
T Consensus        27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-----~~~~--~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih   97 (344)
T 2gn4_A           27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-----MEFN--DPRMRFFIGDVRDLERLNYALE--GVDICIH   97 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-----HHHC--CTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-----HHhc--CCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999 97 9999999865421110     0000  2578999999999999999998  8999999


Q ss_pred             ccCCCc----------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           79 INGREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        79 ~a~~~~----------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +|+...                .++.++++++.  ++++||++||..++              .|.+.| .+|..+|.++
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCSDKLF  163 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHHHHHH
Confidence            998642                34678888876  88999999997542              244567 9999999987


Q ss_pred             Hh-------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          140 ES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       140 ~~-------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      +.       .+++++++|||++||+.  ..+++.+.+.+..++ ++.+. ++...++|+|++|+|++++.++++.. .++
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~--~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~  239 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSR--GSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGE  239 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCT--TSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSC
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCC--CCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCC
Confidence            53       46999999999999986  346677777888887 66664 66778899999999999999998754 578


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHh
Q 023078          212 VFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~  234 (287)
                      +|++.++ .+|+.|+++.+.+.+
T Consensus       240 ~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          240 IFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             EEEECCC-EEEHHHHHHHHCTTC
T ss_pred             EEecCCC-cEEHHHHHHHHHHhC
Confidence            9998876 599999999997654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=2.9e-28  Score=195.98  Aligned_cols=193  Identities=12%  Similarity=0.156  Sum_probs=153.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||+||+++++.|+++|++|++++|++++....         .  ..++ +++.+|++  +.+.+++.  ++|+|||+
T Consensus        27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~---------~--~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~   91 (236)
T 3e8x_A           27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL---------R--ERGASDIVVANLE--EDFSHAFA--SIDAVVFA   91 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH---------H--HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH---------H--hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence            79999999999999999999999999987663211         1  2478 99999998  77788888  99999999


Q ss_pred             cCC------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCC
Q 023078           80 NGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGV  144 (287)
Q Consensus        80 a~~------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~  144 (287)
                      ++.            |..++.+++++++  ++++||++||.+.+..       +..+ .+...| .+|..+|.++++.++
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi  163 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL  163 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence            986            3446788999987  8899999999554321       1111 344456 999999999999999


Q ss_pred             cEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCcccHH
Q 023078          145 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       145 ~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~  224 (287)
                      +++++||+.++|+.....+              .........+++++++|+|++++.+++++...+++|++.++ ..+++
T Consensus       164 ~~~~lrpg~v~~~~~~~~~--------------~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~  228 (236)
T 3e8x_A          164 DYTIVRPGPLSNEESTGKV--------------TVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA  228 (236)
T ss_dssp             EEEEEEECSEECSCCCSEE--------------EEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred             CEEEEeCCcccCCCCCCeE--------------EeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence            9999999999999542221              11223445689999999999999999987667899999888 59999


Q ss_pred             HHHHHHH
Q 023078          225 GLARACA  231 (287)
Q Consensus       225 ~i~~~i~  231 (287)
                      |+++.++
T Consensus       229 e~~~~i~  235 (236)
T 3e8x_A          229 KVVEQLG  235 (236)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhc
Confidence            9998764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=6.5e-28  Score=204.82  Aligned_cols=225  Identities=15%  Similarity=0.136  Sum_probs=168.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-ccCCCCCchhhhhhcCCcEEEEec-CCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||+||++|++.|+++|++|++++|+.++.. ..+        .. ..+++++.+| ++|.+++.++++  ++|+|||
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l--------~~-~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~   79 (352)
T 1xgk_A           11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL--------QA-IPNVTLFQGPLLNNVPLMDTLFE--GAHLAFI   79 (352)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH--------HT-STTEEEEESCCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHH--------hh-cCCcEEEECCccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999999999999876521 111        10 2478899999 999999999998  8999999


Q ss_pred             ccCCC----ccchHHHHHhCC--C-CCcEEEEeeee--EeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEE
Q 023078           79 INGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        79 ~a~~~----~~~~~~l~~a~~--~-~~~~i~~Ss~~--~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      +++..    ....++++++++  + +++|||+||..  .|+.           ..+..|+.+|..+|+++++.+++++++
T Consensus        80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~~~E~~~~~~gi~~~iv  148 (352)
T 1xgk_A           80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKFTVENYVRQLGLPSTFV  148 (352)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHHHHHHHHHHcCCCEEEE
Confidence            88653    223488888876  7 89999999975  2211           123334599999999999999999999


Q ss_pred             ccCceecCCCCCchhHHHHHH-HHcCCC-cccCCCCCceeeeeeH-HHHHHHHHHHhcCCc--CCCceEEeeCCCcccHH
Q 023078          150 RPVYIYGPLNYNPVEEWFFHR-LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~-~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s~~  224 (287)
                      ||+ +||+.....+...+... ...+.. ..+++++++.++++|+ +|+|+++..+++++.  ..+++||+++ +.+|+.
T Consensus       149 rpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~  226 (352)
T 1xgk_A          149 YAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPV  226 (352)
T ss_dssp             EEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHH
T ss_pred             ecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHH
Confidence            976 68886432211000000 122332 1335667788999999 899999999998652  2578999995 679999


Q ss_pred             HHHHHHHHHhCCCCCeEEEcCCCCcC
Q 023078          225 GLARACAKAAGFPEPELVHYNPKEFD  250 (287)
Q Consensus       225 ~i~~~i~~~~g~~~~~~~~~~~~~~~  250 (287)
                      |+++.+.+.+|++. .+...+.+..+
T Consensus       227 e~~~~i~~~~G~~~-~~~~vp~~~~~  251 (352)
T 1xgk_A          227 QVCAAFSRALNRRV-TYVQVPKVEIK  251 (352)
T ss_dssp             HHHHHHHHHHTSCE-EEEECSSCCCC
T ss_pred             HHHHHHHHHHCCCC-ceEECCHHHHH
Confidence            99999999999875 66777755543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=7.3e-28  Score=192.05  Aligned_cols=198  Identities=14%  Similarity=0.120  Sum_probs=148.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|++.+.....           ..+++++.+|++|.+.  +++.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL   70 (224)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence            799999999999999999999999999877643222           3589999999999877  6777  899999999


Q ss_pred             CC---------CccchHHHHHhCC--CCCcEEEEeeeeEeec-CCCC--CCCCCCCCCCCccc-cchHHHHHH--H-Hhc
Q 023078           81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLL--PHCETDTVDPKSRH-KGKLNTESV--L-ESK  142 (287)
Q Consensus        81 ~~---------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~-~~~~--~~~e~~~~~p~~~~-~~k~~~E~~--~-~~~  142 (287)
                      +.         +..++.+++++++  + ++||++||.+++.. ....  +.++...+.|.+.| .+|..+|.+  + ++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            87         4557889999988  6 99999999865443 2221  23333334446677 999998865  2 367


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +++++++||+.+||++....+.       .....+..   +....++++++|+|++++.+++++...+++|++++.+..+
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            8999999999999995432211       11112211   2345689999999999999999988789999999877655


Q ss_pred             HH
Q 023078          223 FD  224 (287)
Q Consensus       223 ~~  224 (287)
                      +.
T Consensus       220 ~~  221 (224)
T 3h2s_A          220 HH  221 (224)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=1.7e-28  Score=204.20  Aligned_cols=223  Identities=18%  Similarity=0.178  Sum_probs=168.0

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||++|+++++.|+++| ++|++++|++.+...       ..+.  ..+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   79 (299)
T 2wm3_A           11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELR--LQGAEVVQGDQDDQVIMELALN--GAYATFIV   79 (299)
T ss_dssp             ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHH--HCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence            7999999999999999998 999999998765210       0111  2578999999999999999998  89999999


Q ss_pred             cCCC--------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEE
Q 023078           80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        80 a~~~--------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      ++..        ...+.+++++++  ++++||++|+.++|+....      .  .+..++.+|..+|+++++.+++++++
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~------~--~~~~y~~sK~~~e~~~~~~gi~~~il  151 (299)
T 2wm3_A           80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG------R--LAAAHFDGKGEVEEYFRDIGVPMTSV  151 (299)
T ss_dssp             CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT------S--CCCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC------c--ccCchhhHHHHHHHHHHHCCCCEEEE
Confidence            8742        235678888876  8999999888777753221      1  12234499999999999999999999


Q ss_pred             ccCceecCCCCCchhHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCc-CCCceEEeeCCCcccHHHHH
Q 023078          150 RPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~i~  227 (287)
                      ||+.+||+.... +..   .....++. ......++..+++++++|+|+++..++.++. ..++.|++++ +.+|+.|++
T Consensus       152 rp~~~~~~~~~~-~~~---~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~  226 (299)
T 2wm3_A          152 RLPCYFENLLSH-FLP---QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYA  226 (299)
T ss_dssp             ECCEEGGGGGTT-TCC---EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHH
T ss_pred             eecHHhhhchhh-cCC---cccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHH
Confidence            999999974210 100   01122322 1112336678999999999999999998742 3578999986 579999999


Q ss_pred             HHHHHHhCCCCCeEEEcCCCC
Q 023078          228 RACAKAAGFPEPELVHYNPKE  248 (287)
Q Consensus       228 ~~i~~~~g~~~~~~~~~~~~~  248 (287)
                      +.+.+.+|++. .+...+.+.
T Consensus       227 ~~~~~~~g~~~-~~~~~~~~~  246 (299)
T 2wm3_A          227 ALLTKHTRKVV-HDAKMTPED  246 (299)
T ss_dssp             HHHHHHHSSCE-EECCCCTHH
T ss_pred             HHHHHHHCCCc-eeEecCHHH
Confidence            99999999875 555555444

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=1.7e-27  Score=200.08  Aligned_cols=224  Identities=18%  Similarity=0.244  Sum_probs=169.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCC-cc----ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-AP----IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~   75 (287)
                      |||||++|+++++.|+++|++|++++|++ +.    ....+     ..+  ...+++++.+|++|.+++.++++  ++|+
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l-----~~~--~~~~v~~v~~D~~d~~~l~~a~~--~~d~   80 (321)
T 3c1o_A           10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLR-----EEF--RSMGVTIIEGEMEEHEKMVSVLK--QVDI   80 (321)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHH-----HHH--HHTTCEEEECCTTCHHHHHHHHT--TCSE
T ss_pred             EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHH-----HHh--hcCCcEEEEecCCCHHHHHHHHc--CCCE
Confidence            79999999999999999999999999986 21    00000     001  13579999999999999999999  8999


Q ss_pred             EEEccCCC-ccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC-CccccchHHHHHHHHhcCCcEEEEc
Q 023078           76 VYDINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLR  150 (287)
Q Consensus        76 vi~~a~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~ilr  150 (287)
                      |||+++.. ...+.+++++++  + ++|||+ |   +||...    ++.....| .+.|.+|..+|.++++.+++++++|
T Consensus        81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr  152 (321)
T 3c1o_A           81 VISALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVS  152 (321)
T ss_dssp             EEECCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEE
T ss_pred             EEECCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcCCCeEEEE
Confidence            99999864 567889999987  7 899983 3   344221    22222233 2345899999999999999999999


Q ss_pred             cCceecCCCCCchhHHHHHH---HHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCC-CcccHHHH
Q 023078          151 PVYIYGPLNYNPVEEWFFHR---LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGL  226 (287)
Q Consensus       151 ~~~v~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~i  226 (287)
                      |+.++++.     ...+...   ...++.+.++++++..+++++++|+|+++..++.++...++.|++.++ +.+|+.|+
T Consensus       153 p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~  227 (321)
T 3c1o_A          153 ANCFGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNEL  227 (321)
T ss_dssp             CCEEHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHH
T ss_pred             eceecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHH
Confidence            99887752     2222210   123344555677788999999999999999999886656788888764 78999999


Q ss_pred             HHHHHHHhCCCCCeEEEcCCC
Q 023078          227 ARACAKAAGFPEPELVHYNPK  247 (287)
Q Consensus       227 ~~~i~~~~g~~~~~~~~~~~~  247 (287)
                      ++.+.+.+|++. .+...+..
T Consensus       228 ~~~~~~~~g~~~-~~~~~~~~  247 (321)
T 3c1o_A          228 ISLWEAKSGLSF-KKVHMPDE  247 (321)
T ss_dssp             HHHHHHHHTSCC-CEEEECHH
T ss_pred             HHHHHHHcCCcc-eeeeCCHH
Confidence            999999999886 56666543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-27  Score=199.82  Aligned_cols=229  Identities=15%  Similarity=0.199  Sum_probs=170.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc--cccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI--AQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||||++|+++++.|+++|++|++++|+....  .+..     ..+.. ...+++++.+|++|.+++.++++  ++|+||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi   82 (308)
T 1qyc_A           10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA-----QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVI   82 (308)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH-----HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHH-----HHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEE
Confidence            69999999999999999999999999986431  0000     00000 13589999999999999999999  899999


Q ss_pred             EccCCC-ccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCC-ccccchHHHHHHHHhcCCcEEEEccC
Q 023078           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        78 ~~a~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~~~~~k~~~E~~~~~~~~~~~ilr~~  152 (287)
                      |+++.. .....+++++++  + ++|||+ |+   ||..    ..+.....|. +.|.+|..+|+++++.+++++++||+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~  154 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN  154 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999864 467889999987  7 899984 43   4422    1222333442 34699999999999999999999999


Q ss_pred             ceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCC-CcccHHHHHHHHH
Q 023078          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA  231 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~i~~~i~  231 (287)
                      .++|+.... +... ......++.+.++++++..+++++++|+|+++..+++++...++.|++.++ +.+|+.|+++.+.
T Consensus       155 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~  232 (308)
T 1qyc_A          155 CFAGYFLRS-LAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE  232 (308)
T ss_dssp             EEHHHHTTT-TTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeccccccc-cccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHH
Confidence            998853211 1000 000112334555677888999999999999999999886656778888764 6799999999999


Q ss_pred             HHhCCCCCeEEEcCCC
Q 023078          232 KAAGFPEPELVHYNPK  247 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~  247 (287)
                      +.+|++. .+...+..
T Consensus       233 ~~~g~~~-~~~~~~~~  247 (308)
T 1qyc_A          233 KKIDKTL-EKAYVPEE  247 (308)
T ss_dssp             HHTTSCC-EEEEECHH
T ss_pred             HHhCCCC-ceEeCCHH
Confidence            9999886 66666543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=4.9e-27  Score=196.09  Aligned_cols=230  Identities=18%  Similarity=0.207  Sum_probs=168.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc---ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA---QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      |||||++|+++++.|+++|++|++++|+++...   +...  ....+.  ..+++++.+|+.|.+++.++++  ++|+||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~l~--~~~v~~v~~D~~d~~~l~~~~~--~~d~vi   81 (307)
T 2gas_A            8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEE--LIDNYQ--SLGVILLEGDINDHETLVKAIK--QVDIVI   81 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHH--HHHHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHH--HHHHHH--hCCCEEEEeCCCCHHHHHHHHh--CCCEEE
Confidence            799999999999999999999999999861100   0000  000111  3578999999999999999998  899999


Q ss_pred             EccCCC-ccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC-CccccchHHHHHHHHhcCCcEEEEccC
Q 023078           78 DINGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        78 ~~a~~~-~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~~~k~~~E~~~~~~~~~~~ilr~~  152 (287)
                      |+++.. .....+++++++  + ++|||+ |   +||...    ++.....| .+.|.+|..+|+++++.+++++++||+
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~  153 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCH  153 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence            999864 567889999987  7 899983 3   344321    22233344 234689999999999999999999999


Q ss_pred             ceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCC-CcccHHHHHHHHH
Q 023078          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA  231 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~i~~~i~  231 (287)
                      .++++... .+... ......++.+.++++++..+++++++|+|+++..+++++...++.|++.++ +.+|++|+++.+.
T Consensus       154 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~  231 (307)
T 2gas_A          154 AFTGYFLR-NLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWE  231 (307)
T ss_dssp             EETTTTGG-GTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeeccccc-ccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHH
Confidence            98886421 11000 000112334455567788899999999999999999886656778888765 6799999999999


Q ss_pred             HHhCCCCCeEEEcCCC
Q 023078          232 KAAGFPEPELVHYNPK  247 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~~  247 (287)
                      +.+|++. .+...+..
T Consensus       232 ~~~g~~~-~~~~~~~~  246 (307)
T 2gas_A          232 KKIGKTL-EKTYVSEE  246 (307)
T ss_dssp             HHHTSCC-EEEEECHH
T ss_pred             HHhCCCC-ceeecCHH
Confidence            9999876 66666543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=1.1e-26  Score=188.51  Aligned_cols=204  Identities=14%  Similarity=0.129  Sum_probs=156.1

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|+||+++++.|+++  |++|++++|++.+... +           ..+++++.+|++|.+++.++++  ++|+|||
T Consensus        10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   75 (253)
T 1xq6_A           10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   75 (253)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-c-----------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999999  8999999998655321 1           2468899999999999999998  8999999


Q ss_pred             ccCCCc-----------------------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-
Q 023078           79 INGREA-----------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (287)
Q Consensus        79 ~a~~~~-----------------------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-  126 (287)
                      +++...                             .++.+++++++  ++++||++||.+++.        +..+..+. 
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~--------~~~~~~~~~  147 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTN--------PDHPLNKLG  147 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTC--------TTCGGGGGG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCC--------CCCcccccc
Confidence            998531                             23577888876  789999999987632        11111111 


Q ss_pred             -ccc-cchHHHHHHHHhcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          127 -SRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       127 -~~~-~~k~~~E~~~~~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                       +.| .+|..+|.++++.+++++++||+.+||+.... .+.        .+....+++   ...++++++|+|++++.++
T Consensus       148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELLQ---TDTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSCEE--------EESTTGGGG---SSCCEEEHHHHHHHHHHHT
T ss_pred             chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhhhh--------ccCCcCCcC---CCCcEEcHHHHHHHHHHHH
Confidence             224 68999999999999999999999999986321 110        011111111   1356999999999999999


Q ss_pred             cCCcCCCceEEeeCCC---cccHHHHHHHHHHHhCCC
Q 023078          204 GNEKASRQVFNISGEK---YVTFDGLARACAKAAGFP  237 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~---~~s~~~i~~~i~~~~g~~  237 (287)
                      +++...+++||+++++   ++|+.|+++.+.+.+|++
T Consensus       217 ~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          217 LFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             TCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             cCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            8866567899999864   599999999999998863

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=3.2e-27  Score=193.35  Aligned_cols=197  Identities=13%  Similarity=0.032  Sum_probs=161.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||++|++.|+++|++|++++|++...   +           ..+++++.+|++|.+.+.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   71 (267)
T 3ay3_A            8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---A-----------EAHEEIVACDLADAQAVHDLVK--DCDGIIHLG   71 (267)
T ss_dssp             ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---C-----------CTTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---c-----------CCCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999986541   1           1367889999999999999998  899999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCCcEEEEeeeeEeecC-CCCCCCCCCCCCCCccc-cchHHHHHHHH----
Q 023078           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (287)
Q Consensus        81 ~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~-~~~~~~e~~~~~p~~~~-~~k~~~E~~~~----  140 (287)
                      +..            ..++.++++++.  ++++||++||..+|+.. ...+++|+.+..|.+.| .+|..+|.+++    
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  151 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH  151 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            863            334678888876  78899999999999864 34578888888888878 99999999874    


Q ss_pred             hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCc
Q 023078          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       141 ~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~  220 (287)
                      +.+++++++||+++|+...                      ++...++++|++|+|+++..+++++...+.+|++.++..
T Consensus       152 ~~gi~~~~lrp~~v~~~~~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~  209 (267)
T 3ay3_A          152 KFDIETLNIRIGSCFPKPK----------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT  209 (267)
T ss_dssp             TTCCCEEEEEECBCSSSCC----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred             HcCCCEEEEeceeecCCCC----------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence            4689999999999984310                      122356899999999999999988654457899988877


Q ss_pred             ccHHHHHHHHHHHhCCC
Q 023078          221 VTFDGLARACAKAAGFP  237 (287)
Q Consensus       221 ~s~~~i~~~i~~~~g~~  237 (287)
                      .++.++.+.  +.+|.+
T Consensus       210 ~~~~d~~~~--~~lg~~  224 (267)
T 3ay3_A          210 ESWWDNDKS--AFLGWV  224 (267)
T ss_dssp             SCCBCCGGG--GGGCCC
T ss_pred             ccccCHHHH--HHcCCC
Confidence            888888777  777855

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=1.6e-26  Score=189.14  Aligned_cols=197  Identities=12%  Similarity=0.017  Sum_probs=162.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|++.+..              ..+++++.+|++|.+++.++++  ++|+|||+|
T Consensus         9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999876522              2578999999999999999998  999999999


Q ss_pred             CCC------------ccchHHHHHhCC--CCCcEEEEeeeeEeecC-CCCCCCCCCCCCCCccc-cchHHHHHHHH----
Q 023078           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (287)
Q Consensus        81 ~~~------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~-~~~~~~e~~~~~p~~~~-~~k~~~E~~~~----  140 (287)
                      |..            ..++.+++++++  +.+++|++||..+|+.. ...+++|+.+..|.+.| .+|...|.+++    
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            873            335677888876  78899999999999743 34567888888888888 99999998874    


Q ss_pred             hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCc
Q 023078          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       141 ~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~  220 (287)
                      +.+++++++||+.++|+.                      .+.....+|++++|+++++..+++.+...+.++++.++++
T Consensus       153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            578999999999999872                      2344567899999999999999988765566888888877


Q ss_pred             ccHHHHHHHHHHHhCCC
Q 023078          221 VTFDGLARACAKAAGFP  237 (287)
Q Consensus       221 ~s~~~i~~~i~~~~g~~  237 (287)
                      .++.++...  +.+|..
T Consensus       211 ~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             TCCBCCGGG--GGGCCC
T ss_pred             CCcccChhH--HHCCCC
Confidence            777666433  566654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=8.1e-26  Score=177.72  Aligned_cols=184  Identities=18%  Similarity=0.261  Sum_probs=143.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||+||+++++.|+++|++|++++|++.+.....           ..+++++.+|++|.+.+.++++  ++|+|||++
T Consensus         9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   75 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence            699999999999999999999999999876532211           2578999999999999999998  899999999


Q ss_pred             CCCc---------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcEEE
Q 023078           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS  148 (287)
Q Consensus        81 ~~~~---------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~~i  148 (287)
                      +...         .++.+++++++  ++++||++||.++|+.....+       .+...| .+|..+|.++++.++++++
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~~e~~~~~~~i~~~~  148 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLRESGLKYVA  148 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHHHHHHHHhCCCCEEE
Confidence            8643         35778888876  889999999998886543211       144456 9999999999999999999


Q ss_pred             EccCceecCCC-CCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCC
Q 023078          149 LRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       149 lr~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~  219 (287)
                      +||+.+ ++.. ...+..            .+.+.+.  .++++++|+|++++.+++++...++.|+++++.
T Consensus       149 lrp~~~-~~~~~~~~~~~------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          149 VMPPHI-GDQPLTGAYTV------------TLDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             ECCSEE-ECCCCCSCCEE------------ESSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             EeCCcc-cCCCCCcceEe------------cccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            999997 4332 111110            0111111  489999999999999999876678899999874

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=2.7e-26  Score=181.77  Aligned_cols=181  Identities=18%  Similarity=0.135  Sum_probs=140.8

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||+||+++++.|+++|+  +|++++|++.+     .          ..+++++.+|+.+.+++.+++    +|+|||
T Consensus        11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~----------~~~~~~~~~D~~~~~~~~~~~----~d~vi~   71 (215)
T 2a35_A           11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----E----------HPRLDNPVGPLAELLPQLDGS----IDTAFC   71 (215)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----C----------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----c----------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence            79999999999999999998  99999998654     1          257888899999888777666    899999


Q ss_pred             ccCCCc--------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        79 ~a~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      +++...              .++.+++++++  ++++||++||.++|+.             |.+.| .+|..+|.++++
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHH
Confidence            998742              35677888876  7889999999888642             23456 999999999999


Q ss_pred             cCCc-EEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCc
Q 023078          142 KGVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       142 ~~~~-~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~  220 (287)
                      .+++ ++++||+.+||+.....+...+    . .....+ .+  ..++++|++|+|++++.+++++.  +++||+++++.
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~  208 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREEFRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVESDEL  208 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHH
T ss_pred             cCCCeEEEEeCceeeCCCCcchHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHH
Confidence            9999 9999999999997543332211    1 111121 22  26789999999999999998865  67999998775


Q ss_pred             ccH
Q 023078          221 VTF  223 (287)
Q Consensus       221 ~s~  223 (287)
                      +++
T Consensus       209 ~~~  211 (215)
T 2a35_A          209 RKL  211 (215)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            554

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=1.4e-23  Score=168.62  Aligned_cols=192  Identities=17%  Similarity=0.193  Sum_probs=139.4

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||||+||+++++.|+++| ++|++++|++++.....           ..+++++.+|++|.+++.++++  ++|+|||+
T Consensus        29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~   95 (236)
T 3qvo_A           29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN   95 (236)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred             EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence            7999999999999999999 89999999977643322           2578999999999999999998  89999999


Q ss_pred             cCCCc--cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEccCcee
Q 023078           80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (287)
Q Consensus        80 a~~~~--~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~~~v~  155 (287)
                      ++...  ..+.+++++++  ++++||++||.++|+.......... ...+..++..+..+|+.+++.+++++++|||.++
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~  174 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN-NAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT  174 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch-hhcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence            98643  24667888876  7899999999999876443221111 1122233466777888888999999999999999


Q ss_pred             cCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc-CCCceEEeeCCCc
Q 023078          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY  220 (287)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~~~~~~~~~  220 (287)
                      ++.....             .. ..........+++++|+|++++.++..+. ..++.|+++++..
T Consensus       175 ~~~~~~~-------------~~-~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          175 DEDIIDY-------------EL-TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             CCSCCCC-------------EE-ECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCCCcce-------------EE-eccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            9743211             00 00111112358999999999999998865 4688999998763

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=5.8e-24  Score=171.42  Aligned_cols=185  Identities=18%  Similarity=0.186  Sum_probs=140.4

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||+||+++++.|+++|+  +|++++|++.+.....           ..++.++.+|++|.+++.++++  ++|+|||
T Consensus        24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   90 (242)
T 2bka_A           24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   90 (242)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence            79999999999999999999  9999999876522110           2367889999999999999998  8999999


Q ss_pred             ccCCC-------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        79 ~a~~~-------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      ++|..             ..++.+++++++  ++++||++||.++|+.             +...| .+|..+|.+++..
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHHHHHHhc
Confidence            99974             335677888876  7889999999988642             22346 9999999999999


Q ss_pred             CC-cEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeC
Q 023078          143 GV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       143 ~~-~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~  217 (287)
                      ++ +++++||+.+||+........++........+.. +    ....+++++|+|++++.++.++.. ++.+++.+
T Consensus       158 ~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          158 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDS-W----ASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTT-G----GGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcc-c----cCCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            99 5999999999999643333333333333322211 1    123589999999999999987653 34666554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.89  E-value=3.5e-23  Score=164.60  Aligned_cols=193  Identities=18%  Similarity=0.229  Sum_probs=140.7

Q ss_pred             CCcccchHHHHHHHHH-HCCCeEEEEecCCc-cccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||||+||+++++.|+ ++|++|++++|++. +..+.         .....+++++.+|++|.+++.++++  ++|+|||
T Consensus        11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~   79 (221)
T 3r6d_A           11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE---------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV   79 (221)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH---------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh---------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999 89999999999876 42211         0114688999999999999999998  9999999


Q ss_pred             ccCC-CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcEEEEccCce
Q 023078           79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI  154 (287)
Q Consensus        79 ~a~~-~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~~ilr~~~v  154 (287)
                      +++. +.. +++++++++  ++++||++||.++|+..... ..+.........| .+|..+|.++++.+++++++|||.+
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v  157 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL  157 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence            9987 344 888888876  78899999999887532210 0000000111135 8999999999999999999999999


Q ss_pred             ecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh--cCCc-CCCceEEeeCCC
Q 023078          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK  219 (287)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~--~~~~-~~~~~~~~~~~~  219 (287)
                      +++.....+             ............+++.+|+|++++.++  ..+. ..++.+.+.++.
T Consensus       158 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          158 YNDPEXTDY-------------ELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             ECCTTCCCC-------------EEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             cCCCCCcce-------------eeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            998321111             000011111224899999999999999  7654 356778887654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.83  E-value=1.1e-21  Score=159.28  Aligned_cols=200  Identities=19%  Similarity=0.153  Sum_probs=135.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|+||+++++.|+++|++|++++|++++..               .   .+.+|+.+.+.+.++++..  ++|+|||
T Consensus         7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            7 TGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            799999999999999999999999999865521               1   1568998888888887643  7999999


Q ss_pred             ccCCCc-------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCC-C-------CCCC-------CCC
Q 023078           79 INGREA-------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLP-H-------CETD-------TVD  124 (287)
Q Consensus        79 ~a~~~~-------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~-~-------~e~~-------~~~  124 (287)
                      +||...             .++.++++++    +  +.+++|++||..+|+.....+ .       +++.       ...
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            998643             2344555543    2  458999999998875431100 0       0000       012


Q ss_pred             CCccc-cchHHHHHHHHh-------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~~-------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      +...| .+|...|.+++.       .+++++++||+.++|+..     ..+......+....... + ...++++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~-----~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL-----QASKADPRYGESTRRFV-A-PLGRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH-----HHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh-----hhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence            34456 999999987642       589999999999998831     11111000000011111 1 334789999999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCCCcccHHH
Q 023078          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~  225 (287)
                      ++++.++..+  ...|+.|++.++..++++|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999865  3468899999987766643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.82  E-value=7.2e-21  Score=156.71  Aligned_cols=212  Identities=17%  Similarity=0.148  Sum_probs=145.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .....+++++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A           11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH--------HHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            899999999999999999999999999876532211        112357899999999999888887643     7899


Q ss_pred             EEEccCCCc--------------------cc----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||...                    .+    ++.++..++  +..++|++||...+.           ...+.+.|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  151 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFAGFSAY  151 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCCCchHH
Confidence            999998631                    12    344445444  678999999976532           12234457


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC------chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                       .+|...|.+.+       ..++++++++||.+.++....      .....+............   ......+.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dv  228 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ---GSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH---C-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh---hccCCCCCCHHHH
Confidence             99999988753       268999999999998874211      111111111111111111   1123467889999


Q ss_pred             HHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhC
Q 023078          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g  235 (287)
                      |++++.+++.+. .+..|+++++......+....+.+.++
T Consensus       229 a~a~~~~~~~~~-~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          229 AAAIRLALDTEK-TPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHSSS-CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            999999998866 466899988776667777777766554

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.82  E-value=1.9e-20  Score=153.94  Aligned_cols=211  Identities=15%  Similarity=0.133  Sum_probs=146.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+. ...++.++.+|++|.+++.++++..     ++|+
T Consensus        22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-----HHhC-CCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421110     0010 0126889999999999888887632     6999


Q ss_pred             EEEccCCCc----------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREA----------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~----------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||++|...                      .+..++++++    .  +..++|++||...|....          .+..
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  165 (278)
T 2bgk_A           96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH  165 (278)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred             EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CCCc
Confidence            999998532                      1123333332    2  567999999987754221          1233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      .| .+|...|.+.+       ..+++++++|||.++++......  .......+....+       .....+++++|+|+
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~  238 (278)
T 2bgk_A          166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGTLLRAEDVAD  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSCCCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccccCCHHHHHH
Confidence            46 99999988763       25899999999999998632211  1222222222111       11235789999999


Q ss_pred             HHHHHhcCC--cCCCceEEeeCCCcccHHHHHHHHHHHh
Q 023078          198 AFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~~~~~~~~s~~~i~~~i~~~~  234 (287)
                      +++.++...  ...|+.|++.++..++++|+++.+.+.+
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            999998653  2368899999999999999999886543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.82  E-value=2.5e-20  Score=151.20  Aligned_cols=198  Identities=13%  Similarity=0.129  Sum_probs=138.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999999865422111     112222357888999999999888877532     7999


Q ss_pred             EEEccCCCcc-------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      |||+||....                   ++.++++++    +  +..++|++||...+..           ..+...| 
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  160 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------CCCCcccH
Confidence            9999986321                   233344443    2  6789999999876432           1233456 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...|.+.+       ..+++++++|||.++++.......+.+......+.++         ..+.+++|+|+++..+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHH
Confidence            99999988763       2489999999999998742221223333333333322         2467899999999999


Q ss_pred             hcCCc--CCCceEEeeCCCcccH
Q 023078          203 LGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~~~s~  223 (287)
                      +....  ..|+.|++.++...|+
T Consensus       232 ~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          232 CSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCCC
T ss_pred             hCCccccCCCcEEEECCceeccC
Confidence            87543  2578999999887664

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.80  E-value=1.1e-19  Score=146.42  Aligned_cols=191  Identities=15%  Similarity=0.149  Sum_probs=134.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.         .....+++++.+|++|.+++.++++.. .+|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A           13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL---------AKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999986542211         111246778899999999999988743 48999999


Q ss_pred             cCCCc--------------------cchHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           80 NGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        80 a~~~~--------------------~~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      ||...                    .++.++++++    .  + ..++|++||...|...           .+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  152 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNLITYSST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCcchhHHH
Confidence            98532                    1233344443    2  4 6799999998765321           123346 99


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      |...|.+.+       ..+++++++||+.++++..... ....+...+..+.+         ..++++++|+|++++.++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHh
Confidence            999988763       2589999999999998742100 11223233333222         247899999999999999


Q ss_pred             cCCc--CCCceEEeeCCCc
Q 023078          204 GNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~~~  220 (287)
                      ..+.  ..|+.+++.++..
T Consensus       224 ~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGG
T ss_pred             CchhhcccCCEEEECCCcc
Confidence            7643  3578899888754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.78  E-value=4.9e-20  Score=153.27  Aligned_cols=211  Identities=16%  Similarity=0.173  Sum_probs=143.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+... ..++.++.+|++|.+++.++++..     .+|
T Consensus        32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422111     111111 357899999999999888887642     579


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC------C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~------~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|||+||....                    ++.++++++      + +..++|++||...+...           .+..
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~  175 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------GFVV  175 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------TTCH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----------CCcc
Confidence            99999985321                    122333332      2 45799999998654321           2233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH--HHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      .| .+|...|.+.+       ..+++++++|||.++++........  .....+....+.         ..+.+++|+|+
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~  246 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELAN  246 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CCCCCHHHHHH
Confidence            46 99999988763       2689999999999998742111100  111222222211         24678999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCcccHHHHHHHHHHHhCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s~~~i~~~i~~~~g~  236 (287)
                      +++.++....  ..|+.|++.++..++++++++.+.+..|.
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred             HHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence            9999987543  26889999999888888888877766553

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.77  E-value=1.1e-18  Score=142.55  Aligned_cols=195  Identities=13%  Similarity=0.124  Sum_probs=121.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+.....++.++.+|+++.+++.++++.      .++|
T Consensus        20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            899999999999999999999999999865422111     11122235688899999999888887753      3799


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +|||+||...                    .++.++++++    +  +..++|++||...+...           .+...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  163 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SVGSI  163 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------CCCch
Confidence            9999998632                    1233455554    2  67899999998765321           12334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++++|||.++++.........+.......         .....+++++|+|+++.
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence            6 99999888763       2489999999999999853221111111111111         11124789999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCc
Q 023078          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .++....  ..|+.+++.++..
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHcCccccCccCcEEEEcCCcc
Confidence            9887532  3688999998854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.77  E-value=1.3e-18  Score=141.48  Aligned_cols=196  Identities=13%  Similarity=0.197  Sum_probs=134.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-----EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111222357889999999999888887632     6899


Q ss_pred             EEEccCCCc-c--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA-D--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~-~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||+||... .                    ++.++++++    +  +..++|++||...+...         +..|...
T Consensus        94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~~~~  164 (260)
T 3awd_A           94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQQAA  164 (260)
T ss_dssp             EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCCHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCCccc
Confidence            999998643 1                    123333432    2  57799999997653211         1122345


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...|.+.+       ..+++++++|||.++++... ....+.+...+..+.+.         ..+++++|+|+++
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  235 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHH
Confidence            6 99999988763       26899999999999998542 11112233333333221         2478899999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCC
Q 023078          200 VQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      ..++...  ...|+.|++.++.
T Consensus       236 ~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          236 QFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhccCCCcEEEECCce
Confidence            9998753  2367899998875

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.77  E-value=4.1e-18  Score=137.73  Aligned_cols=194  Identities=14%  Similarity=0.247  Sum_probs=132.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..     ..+ .....++.++.+|++|.+++.++++..     ++|
T Consensus         8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETA-----RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865422110     001 111346889999999999888887632     799


Q ss_pred             EEEEccCCCcc-----------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           75 VVYDINGREAD-----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        75 ~vi~~a~~~~~-----------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|||++|....                       +.    +.++..++  +..++|++||...+...           .+
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~  151 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-----------PG  151 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CC
Confidence            99999985321                       11    22333333  67899999998754221           12


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..+++++++|||.++++...... ...+...+....+.         ..+.+++|+|
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  222 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------KEIGTAAQVA  222 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------CSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            3346 99999888763       24899999999999998532211 11222333332221         2467899999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++..+.  ..|+.+++.+|.
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcCchhhcccCCEEEECCce
Confidence            99999987643  358899998774

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.76  E-value=2.9e-18  Score=138.11  Aligned_cols=191  Identities=13%  Similarity=0.138  Sum_probs=131.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+.         .....+++++.+|++|.+++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A           13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999986542211         111235678899999999999988743 58999999


Q ss_pred             cCCCcc--------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           80 NGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        80 a~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      +|....                    +..++.+++    +  + ..++|++||...+..           ..+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  152 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------CCCCchHHHH
Confidence            986321                    122233332    2  4 678999999865421           1233456 99


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      |...|.+.+       ..++++++++||.++++...... .......+....+         ...+++++|+|++++.++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHc
Confidence            999998763       25899999999999988421100 0111122222211         236789999999999999


Q ss_pred             cCCc--CCCceEEeeCCCc
Q 023078          204 GNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~~~  220 (287)
                      ....  ..|+.|++.++..
T Consensus       224 ~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CccccCCCCCEEEECCCcc
Confidence            7542  3688999988754

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=3e-18  Score=140.78  Aligned_cols=209  Identities=15%  Similarity=0.148  Sum_probs=130.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh---hhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+   .....++.++.+|++|++++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A           12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999865422110     011   011246788999999998888877632     7


Q ss_pred             ccEEEEccCCCcc------------------------chHHHHHh----CC-CCCcEEEEeeeeE-eecCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGV-YLKSDLLPHCETDT  122 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l~~a----~~-~~~~~i~~Ss~~~-y~~~~~~~~~e~~~  122 (287)
                      +|++||+||....                        ++.+++++    ++ ...++|++||... +..           
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  155 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-----------  155 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC-----------
Confidence            9999999986321                        11223333    22 1279999999765 321           


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh--HHH------HHHHHcCCCcccCCCCCce
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWF------FHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~  186 (287)
                      ..+...| .+|...+.+.+       ..++++++++||.+.++.......  ...      ...+....+         .
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~  226 (278)
T 1spx_A          156 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP---------A  226 (278)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT---------T
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC---------C
Confidence            1122346 89999887763       368999999999999885221100  000      111111111         1


Q ss_pred             eeeeeHHHHHHHHHHHhcCCc---CCCceEEeeCCCcccHHHHHHHHHHHh
Q 023078          187 TQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKAA  234 (287)
Q Consensus       187 ~~~i~~~Dva~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~i~~~i~~~~  234 (287)
                      ..+.+++|+|++++.++..+.   ..|+.+++.++..+++.++++.+.+.+
T Consensus       227 ~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            247899999999999887532   368899999999999999999988754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.8e-17  Score=134.61  Aligned_cols=186  Identities=17%  Similarity=0.173  Sum_probs=133.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....              ..++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            899999999999999999999999999865421              246889999999999888877643     7999


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||...                    .++.++++++    +  +..++|++||...+..         ....+...|
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------~~~~~~~~Y  170 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP---------MVGMPSALA  170 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC---------BTTCCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC---------CCCCccHHH
Confidence            999998632                    1233444443    2  6789999999765321         112233456


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.++++......    ........+         ...+.+++|+|++++.
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~p---------~~r~~~~~dva~av~~  237 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLHP---------VGRMGEIRDVVDAVLY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTST---------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccCC---------CCCCcCHHHHHHHHHH
Confidence             89999887763       24899999999999998543221    122222222         2346679999999999


Q ss_pred             HhcCCcCCCceEEeeCCCccc
Q 023078          202 VLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +.+.....|+.+++.+|...+
T Consensus       238 L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          238 LEHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHCTTCCSCEEEESTTGGGC
T ss_pred             hcccCCCCCcEEEECCCeecc
Confidence            866555578999999886543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.75  E-value=3.3e-18  Score=137.57  Aligned_cols=185  Identities=16%  Similarity=0.172  Sum_probs=131.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|+||+++++.|+++|++|++++|+...                 ..+.++.+|++|.+++.++++..    ++|++
T Consensus         8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            7999999999999999999999999998641                 24578999999999888887643    78999


Q ss_pred             EEccCCCcc------------------------chHHHHHhC----CC-----C---CcEEEEeeeeEeecCCCCCCCCC
Q 023078           77 YDINGREAD------------------------EVEPILDAL----PN-----L---EQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        77 i~~a~~~~~------------------------~~~~l~~a~----~~-----~---~~~i~~Ss~~~y~~~~~~~~~e~  120 (287)
                      ||++|....                        ++.++++++    ..     .   .++|++||...+...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            999986321                        123334432    21     1   289999998775432        


Q ss_pred             CCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       121 ~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                         .+...| .+|...+.+.+       ..+++++++|||.++++.... ....+...+....+.        ...++++
T Consensus       143 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~  210 (242)
T 1uay_A          143 ---IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--------PPRLGRP  210 (242)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--------SCSCCCH
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--------cccCCCH
Confidence               123446 89988887653       348999999999999874211 112223333333221        0246789


Q ss_pred             HHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          193 KDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +|+|++++.++......|+.|++.++..++
T Consensus       211 ~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          211 EEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            999999999998755578899999886543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.75  E-value=1.4e-18  Score=142.92  Aligned_cols=213  Identities=19%  Similarity=0.161  Sum_probs=147.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhc---CCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     .++....   .++.++.+|++|++++.++++..     +
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-----QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999876532111     1111111   26788999999999888887643     6


Q ss_pred             ccEEEEccCCC-c--------------------cchHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGRE-A--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~-~--------------------~~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|++||+||.. .                    .++.++++++.      +..++|++||...+...           .+
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~  160 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-----------RW  160 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----------TT
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC-----------CC
Confidence            89999999961 1                    12333444422      44599999998765321           12


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+.++..... .............++         ..+.+++|+|
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva  231 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVA  231 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            3346 99999988763       3579999999999988742110 001122222222221         2456799999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCccc-HHHHHHHHHHHhCCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYVT-FDGLARACAKAAGFPE  238 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~s-~~~i~~~i~~~~g~~~  238 (287)
                      ++++.++....  ..|+.+++.+|..++ ..++++.+.+.+|.+.
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            99999987643  268999999998876 7788999999988653

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.75  E-value=2.7e-18  Score=139.89  Aligned_cols=198  Identities=14%  Similarity=0.162  Sum_probs=133.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+... ..++.++.+|++|.+++.++++..     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (263)
T 3ai3_A           13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-----RSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD   87 (263)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422111     111111 346888999999999888877632     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +..+++++    ++  +..++|++||...+...           .+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (263)
T 3ai3_A           88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WYEPI  156 (263)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCcch
Confidence            99999986321                    12233333    32  67899999998765321           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch----------hHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      | .+|...+.+.+       ..++++++++||.++++......          ...+...+....        .....+.
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~  228 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------APIKRFA  228 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCc
Confidence            6 89999887763       36899999999999987321100          001111111110        0113578


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      +++|+|++++.++..+.  ..|+.|++.+|..+|
T Consensus       229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          229 SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999999999987543  358899999886554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.75  E-value=1.4e-18  Score=141.57  Aligned_cols=204  Identities=15%  Similarity=0.136  Sum_probs=127.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchh--hhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQE--FAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.........  ......++.++.+|++|.+++.++++..     .+
T Consensus        13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (264)
T 2pd6_A           13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRP   92 (264)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998665321110000000  0000146889999999999888887632     23


Q ss_pred             -cEEEEccCCCcc--------------------chHHHHHhCC------C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 -DVVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 -d~vi~~a~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                       |+|||+||....                    ++.++++++.      + ..++|++||...+...           .+
T Consensus        93 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~  161 (264)
T 2pd6_A           93 PSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN-----------VG  161 (264)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----------TT
T ss_pred             CeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----------CC
Confidence             999999986321                    2334444432      3 5689999997643211           12


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      ...| .+|...+.+.+       ..+++++++|||.++++.... ....+...+....         ....+.+++|+|+
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~  231 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPEDVAD  231 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHHHHHH
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHHHHHH
Confidence            3446 99998887653       268999999999999985321 1111111111111         1124678999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCcccHHH
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s~~~  225 (287)
                      ++..++....  ..|+.+++.++..++...
T Consensus       232 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          232 VVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             HHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            9999987532  368899999887665443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.75  E-value=1.5e-18  Score=141.14  Aligned_cols=201  Identities=17%  Similarity=0.200  Sum_probs=135.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQAA--------AEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532111        112356789999999999888877643     7999


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC------C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~------~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...                    .++.++++++.      + ..++|++||...+..           ..+...
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  154 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----------EALVAI  154 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------CCCChH
Confidence            999999732                    12334444432      2 568999999875421           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCC---CcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR---PIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       ..+++++.++||.++++....  ...++.......   ......+......+.+++|+|+
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence            6 99999988763       358999999999999984211  111111111110   0111111123356889999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      +++.++....  ..|+.|++.+|..+|
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            9998886533  368999999887553

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.75  E-value=4.2e-18  Score=137.99  Aligned_cols=193  Identities=16%  Similarity=0.219  Sum_probs=111.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+...+..     .++.....++.++.+|++|.+++.++++..     ++|+
T Consensus        15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-----KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999866532211     122222457889999999999888887643     7999


Q ss_pred             EEEccCCCc-----------------------cc----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREA-----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~-----------------------~~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +||+||...                       .+    ++.++..++  +..++|++||...|.              +.
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------~~  155 (253)
T 3qiv_A           90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL--------------YS  155 (253)
T ss_dssp             EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred             EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC--------------CC
Confidence            999998621                       01    222333333  667899999988752              12


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|...+.+.+       ..+++++.++||.++++.........+...+.++.         ....+.+++|+|++
T Consensus       156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~  226 (253)
T 3qiv_A          156 NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGM  226 (253)
T ss_dssp             ----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHH
Confidence            236 89998887763       24799999999999988532211111122222211         22345678999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCcc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      +..++....  ..|+.|++.+|..+
T Consensus       227 ~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          227 CLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHHHSGGGTTCCSCEEEC------
T ss_pred             HHHHcCccccCCCCCEEEECCCeec
Confidence            999987543  26899999988654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.74  E-value=4.4e-18  Score=133.10  Aligned_cols=161  Identities=12%  Similarity=0.114  Sum_probs=119.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+ +|++|++++|+..                      .+.+|+++.+++.++++.. ++|+|||+
T Consensus         9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999 9999999999743                      2688999999998888732 48999999


Q ss_pred             cCCC--------------------ccchHHHHHhCC-C---CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           80 NGRE--------------------ADEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        80 a~~~--------------------~~~~~~l~~a~~-~---~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      +|..                    ..++.++++++. .   ..++|++||...+..           ..+...| .+|..
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----------IVQGASAAMANGA  134 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----------CCccHHHHHHHHH
Confidence            9853                    223456667765 1   368999998765321           1223446 99999


Q ss_pred             HHHHHHh------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          135 TESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       135 ~E~~~~~------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      .|.+.+.      .+++++++||+.++++..          ....         .....++++++|+|++++.++.. ..
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~~~~---------~~~~~~~~~~~dva~~~~~~~~~-~~  194 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------KLEP---------FFEGFLPVPAAKVARAFEKSVFG-AQ  194 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------HHGG---------GSTTCCCBCHHHHHHHHHHHHHS-CC
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCchh----------hhhh---------hccccCCCCHHHHHHHHHHhhhc-cc
Confidence            9988742      389999999999998721          0111         11235789999999999988854 33


Q ss_pred             CCceEEe
Q 023078          209 SRQVFNI  215 (287)
Q Consensus       209 ~~~~~~~  215 (287)
                      .|+.|++
T Consensus       195 ~G~~~~v  201 (202)
T 3d7l_A          195 TGESYQV  201 (202)
T ss_dssp             CSCEEEE
T ss_pred             cCceEec
Confidence            6778886

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.74  E-value=1.3e-18  Score=136.58  Aligned_cols=164  Identities=19%  Similarity=0.116  Sum_probs=120.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-CCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++  +|++++|++.+.....         ..... +++.+|++|++++.++++. .++|+|||+
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~---------~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAELA---------REVGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH---------HHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH---------HhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999998  9999999765422110         00112 7889999999999888862 269999999


Q ss_pred             cCCCc--------------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHH
Q 023078           80 NGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~~--------------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E  136 (287)
                      +|...                    .++.+++++++  +..++|++||...|.+.           .+...| .+|...|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTBHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCcchHHHHHHHHH
Confidence            98632                    13456777776  67899999998876321           233456 9999988


Q ss_pred             HHHHh-------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       137 ~~~~~-------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      .+.+.       .+++++++|||.++++..             .       +.+.....+++++|+|++++.+++++.
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW-------------A-------PLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG-------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc-------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            87642       589999999999988730             0       011223578999999999999998765

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.74  E-value=4.2e-18  Score=137.76  Aligned_cols=194  Identities=19%  Similarity=0.188  Sum_probs=130.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.........     .+.. ..++.++.+|++|.+++.++++..     .+|+
T Consensus        12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A           12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-----SVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221110     0000 147889999999999888887631     5899


Q ss_pred             EEEccCCCcc------------------------chHHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |||++|....                        .++.+++.++  +. .++|++||...+...           .+...
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  154 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCCcc
Confidence            9999986321                        1233445544  45 799999998764321           12334


Q ss_pred             c-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+         ..+++++++|||.++++.... ........ ...       .......+++++|+|++
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~-~~~-------~~~~~~~~~~~~dva~~  225 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAM-SQR-------TKTPMGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHH-TST-------TTCTTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhH-HHh-------hcCCCCCCcCHHHHHHH
Confidence            6 89998887653         458999999999998873211 00000000 000       11112347899999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +..++....  ..|+.+++.+|..
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHcCcccccccCcEEEECCCcc
Confidence            999987543  3688999988754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.74  E-value=1.2e-17  Score=134.69  Aligned_cols=194  Identities=17%  Similarity=0.223  Sum_probs=136.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A           10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV----VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999988654322111    1122222457889999999999888877643     7899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||...                    .++.++++++    +  +..++|++||...+...           .+...|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-----------PGQANY  154 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence            999998742                    1234444543    2  66799999997754221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... ........+....++         ..+.+++|+|+++..
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~  224 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAF  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             99998887753       468999999999999885322 233344444444332         245678999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|+.|++.+|.
T Consensus       225 l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          225 LASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HTSGGGTTCCSCEEEESTTS
T ss_pred             HhCccccCCCCCEEEeCCCc
Confidence            887543  258999998874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.74  E-value=1.5e-18  Score=140.87  Aligned_cols=194  Identities=19%  Similarity=0.228  Sum_probs=132.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecC-CccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+ .....+..     ..+.....++.++.+|++|.+++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B           13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-----ASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-----HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999998 44321110     111122356889999999999888887642     799


Q ss_pred             EEEEccCC-Ccc--------------------chHHHHHh----CC--C--C---CcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           75 VVYDINGR-EAD--------------------EVEPILDA----LP--N--L---EQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        75 ~vi~~a~~-~~~--------------------~~~~l~~a----~~--~--~---~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                      +|||+||. ...                    ++.+++++    +.  +  .   .++|++||...+..          .
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~  157 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----------G  157 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------C
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------C
Confidence            99999986 211                    12222222    21  2  2   78999999765431          0


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+...| .+|...|.+.+       ..+++++++|||.++++.... ....+...+..+.+         ...+++++|
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~d  227 (258)
T 3afn_B          158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-KTQDVRDRISNGIP---------MGRFGTAEE  227 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-CCHHHHHHHHTTCT---------TCSCBCGGG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-cCHHHHHHHhccCC---------CCcCCCHHH
Confidence            1133456 99999988763       248999999999999985322 12233334433322         135789999


Q ss_pred             HHHHHHHHhcCCc---CCCceEEeeCCC
Q 023078          195 LARAFVQVLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~~---~~~~~~~~~~~~  219 (287)
                      +|++++.++....   ..|+.|++.++.
T Consensus       228 va~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          228 MAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHhCcchhccccCCEEeECCCc
Confidence            9999999987542   358899998875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.74  E-value=8.8e-18  Score=135.61  Aligned_cols=193  Identities=15%  Similarity=0.179  Sum_probs=131.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ..+.. ...++.++.+|++|.+++.++++..     ++|
T Consensus        13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   87 (248)
T 2pnf_A           13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA-----EEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID   87 (248)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            899999999999999999999999999865422110     11111 1357888999999999888887632     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +|||+||....                    ++.++.++    ++  +.+++|++||...+...           .+...
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  156 (248)
T 2pnf_A           88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VGQVN  156 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CCCch
Confidence            99999986321                    23223333    22  67899999997643211           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..++++++++||.++++.... +...+........+         ...+++++|+|+++.
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIP---------LGRFGSPEEVANVVL  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCC---------CCCccCHHHHHHHHH
Confidence            6 89998887653       358999999999999874321 11222222222211         124789999999999


Q ss_pred             HHhcCC--cCCCceEEeeCCC
Q 023078          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (287)
                      .++...  ...|+.|++.++.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            998753  2358899998763

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.74  E-value=4.5e-18  Score=139.38  Aligned_cols=195  Identities=18%  Similarity=0.152  Sum_probs=130.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~  102 (274)
T 1ja9_A           27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF  102 (274)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999433211111    0111222357889999999999888877632     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CCCCCcEEEEeeeeEe-ecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~~y-~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      |||++|....                    ++.+++++    ++...++|++||...+ ...           .+...| 
T Consensus       103 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y~  171 (274)
T 1ja9_A          103 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-----------PNHALYA  171 (274)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----------CSCHHHH
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-----------CCCchHH
Confidence            9999986321                    23333333    3212699999998764 211           122346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-----------chh-HHHHHHHHcCCCcccCCCCCceeeee
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      .+|...|.+.+       ..++++++++||.++++....           ... ......+..+         .....++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  242 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM---------NPLKRIG  242 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT---------STTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc---------CCCCCcc
Confidence            99999988764       248999999999998763110           000 1111122111         1224588


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++|+|+++..++..+.  ..|+.|++.+|.
T Consensus       243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          243 YPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            99999999999997643  268899998763

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.73  E-value=1.3e-17  Score=135.63  Aligned_cols=195  Identities=15%  Similarity=0.118  Sum_probs=129.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEec-CCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++| +.....+ +    ...+.....++.++.+|++|.+++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A           13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANS-V----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-H----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHH-H----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999 4333111 1    0111112346788999999998888877632     789


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|||+||....                    +..+++++    +.  + ..++|++||...+.           +..+..
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  156 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWPLFV  156 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCCCcc
Confidence            99999986321                    12233333    22  3 67999999976431           112334


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .| .+|...+.+.+       ..+++++++|||.++++...... .+.....+....+         ...+++++|+|++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~  227 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYIGEPEEIAAV  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence            56 89988887653       35899999999999988421100 0111222222111         1247899999999


Q ss_pred             HHHHhcCC--cCCCceEEeeCCCc
Q 023078          199 FVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       199 ~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      ++.++...  ...|+.+++.++..
T Consensus       228 ~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          228 AAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCccccCCCCcEEEEcCCcc
Confidence            99998753  23688999988764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.73  E-value=1.4e-17  Score=134.32  Aligned_cols=192  Identities=16%  Similarity=0.210  Sum_probs=123.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|+++ .|++......     ...+.....++.++.+|++|.+++.++++..     ++|
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A           11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDAT-----AEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHH-----HHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999 4554432111     0111222356889999999999888877632     799


Q ss_pred             EEEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeee-EeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~-~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|||+||...                    .++.++.++    ++  +..++|++||.. .|+.            .+..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~  153 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------AGQA  153 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------CCCc
Confidence            9999998632                    122223333    32  668999999975 3321            1223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...|.+.+       ..++++++++||.+.++... .+.......+..+.+         ...+++++|+|+++
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  223 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD-VLPDKVKEMYLNNIP---------LKRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-TSCHHHHHHHHTTST---------TSSCBCHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh-hcchHHHHHHHhhCC---------CCCCCCHHHHHHHH
Confidence            46 99999887763       24899999999998775211 111112222222211         13478999999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ..++..+.  ..|+.|++.++.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            99887542  367899998874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.73  E-value=1.6e-17  Score=134.62  Aligned_cols=193  Identities=14%  Similarity=0.192  Sum_probs=130.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCChHHHHhhhcc----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..        .+...++ .++.+|++|.+++.++++.    .++|+
T Consensus        17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRAA--------QELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            799999999999999999999999999865422111        1112345 7899999999988887753    27999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +    ++.+++.++  +..++|++||...+...         +..|...|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y  159 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFASSY  159 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCBHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcchHH
Confidence            9999986321                    1    222333333  67899999998764321         11233456


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...|.+.+       ..+++++++|||.++++...... .+.+...+....+         ...+++++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence             99999888763       24899999999999987321000 0112222222211         124789999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+++.++.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCcccccccCCEEEECCCE
Confidence            9986532  368899998774

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.72  E-value=9e-18  Score=136.19  Aligned_cols=198  Identities=15%  Similarity=0.115  Sum_probs=135.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-----AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532211     122222467889999999998888777642     7999


Q ss_pred             EEEccCCCcc-------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||....                   +..++++++    +  +..++|++||...+..           ..+...| 
T Consensus        93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  161 (256)
T 3gaf_A           93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-----------NVRMASYG  161 (256)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-----------CCCchHHH
Confidence            9999986321                   233344442    2  5679999999875321           1123346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..++||.+..+.......+.....+....+         ...+.+++|+|++++.+
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTP---------LGRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHH
Confidence            99999887763       358999999999988763111111122223333222         12467899999999999


Q ss_pred             hcCCc--CCCceEEeeCCCcccH
Q 023078          203 LGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~~~s~  223 (287)
                      +....  ..|+.+++.+|...++
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCC-
T ss_pred             cCCcccCccCCEEEECCCccccC
Confidence            87532  3689999999876554

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.72  E-value=9.5e-18  Score=136.66  Aligned_cols=192  Identities=15%  Similarity=0.144  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+...        ....++.++.+|++|.+++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA--------GLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655221110        01136788999999999888877632     6999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +..++.+++    .  + ..++|++||...+..           ..+...
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----------APLLAH  158 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----------CCCchh
Confidence            9999986321                    122333332    2  3 689999999765321           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----h-----HHHHHHHHcCCCcccCCCCCceeeee
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      | .+|...+.+.+       ..++++++++||.++++......     .     ......+....         ....++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~  229 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT---------PLGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---------CCCCCc
Confidence            6 89999887763       35899999999999887311100     0     01111111111         113478


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +++|+|++++.++....  ..|+.+++.+|..
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            99999999999987542  3688999988754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.72  E-value=2.8e-17  Score=132.54  Aligned_cols=190  Identities=14%  Similarity=0.122  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+.. .         ..++.++.+|++|.+++.++++.. ++|++||+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A           12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---------ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            899999999999999999999999999865532211 0         136888999999999888776533 79999999


Q ss_pred             cCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      ||....                    +..+++++    ++  +..++|++||...+...          ..+...| .+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~~sK  151 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTK  151 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCCCccHHHHH
Confidence            986321                    12233333    22  57899999997653211          1123346 999


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      ...+.+.+       ..+++++++|||.++++......     .......+....+         ...+.+++|+|++++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~  222 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCV  222 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence            99888764       24899999999999987311100     0111112222111         123689999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+++.+|.
T Consensus       223 ~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          223 YLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhCccccCCCCCEEEECCCc
Confidence            9986533  368899998774

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.72  E-value=2.9e-17  Score=133.44  Aligned_cols=189  Identities=12%  Similarity=0.068  Sum_probs=128.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+.+        .  ..++.++.+|++|.+++.++++..     ++|+
T Consensus        33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL--------R--QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHH--------H--HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------H--hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999999876532221        1  135789999999998888877642     6999


Q ss_pred             EEEccCCCcc-------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||....                   +..++.+++    +  +..++|++||...+..           ..+...| 
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  171 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------SSKHIAYC  171 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------CSSCHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------CCCcHhHH
Confidence            9999986321                   223333332    2  5579999999875421           1123346 


Q ss_pred             cchHHHHHHHH----h--cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      .+|...+.+.+    +  .++++..++||.+..+....   ...........+.         .-+..++|+|++++.++
T Consensus       172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            99999887763    2  25999999999998763211   1111111111111         22456899999999999


Q ss_pred             cCCcCCCceEEeeCCCccc
Q 023078          204 GNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s  222 (287)
                      +.....|+.+++.+|..++
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HCSSCCSCEEEESTTTTTC
T ss_pred             hCCCCCCCEEEECCCcccC
Confidence            7666689999999987654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.72  E-value=4.3e-17  Score=134.08  Aligned_cols=211  Identities=15%  Similarity=0.131  Sum_probs=136.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC-------chhhhhhcCCcEEEEecCCChHHHHhhhccC--
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--   71 (287)
                      |||+|+||+++++.|+++|++|++++|++...........       .........++.++.+|++|.+++.++++..  
T Consensus        16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (281)
T 3s55_A           16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED   95 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999997543111111000       0111222457889999999999888887643  


Q ss_pred             ---CccEEEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        72 ---~~d~vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                         ++|++||+||...                    .++.+++++    ++  +..++|++||...+..           
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  164 (281)
T 3s55_A           96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA-----------  164 (281)
T ss_dssp             HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC-----------
Confidence               7999999999632                    123334444    22  5679999999875421           


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHH-HHHHHHcCCC----cccCCCCCceeee
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-FFHRLKAGRP----IPIPGSGIQVTQL  189 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~  189 (287)
                      ..+...| .+|...+.+.+       ..++++..++||.++++......... +.........    ..+.........+
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence            1123346 99999887753       35899999999999998643211100 0000000000    0000001122468


Q ss_pred             eeHHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      .+++|+|++++.++....  ..|+.+++.+|...+
T Consensus       245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            899999999999997643  368999999987654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.72  E-value=3.8e-17  Score=131.84  Aligned_cols=195  Identities=16%  Similarity=0.160  Sum_probs=135.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFE-----NSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532211     122222457899999999999888877642     5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.+++    .  +..++|++||...+...           .+...|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN-----------PGQTNY  154 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCcHHH
Confidence            9999987421                    223333332    2  55699999997754221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+..+.... .............         ....+.+++|+|+++..
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKI---------PSGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTS---------TTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcC---------CCCCCcCHHHHHHHHHH
Confidence             99998877653       358999999999998875322 1222222222221         12357889999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCcc
Q 023078          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++....  ..|+.+++.+|..+
T Consensus       225 l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          225 LASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCCEEEECCCEec
Confidence            987543  36899999888644

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.72  E-value=1.1e-17  Score=134.87  Aligned_cols=193  Identities=13%  Similarity=0.203  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEE-EEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|+||+++++.|+++|++|+++ +|+.++..+..     ..+.....++.. +.+|++|.+++.++++.     .++
T Consensus         7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-----EEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-----HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999998 67654422110     111112345666 89999999888877652     279


Q ss_pred             cEEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |+|||+||....                    +    ++.+++.++  +.+++|++||...+.+.           .+..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~  150 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------PGQA  150 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------SSBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------CCCc
Confidence            999999986321                    1    333444443  67899999997643211           1223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++++|||.++++.... ....+...+....+         ...+++++|+|+++
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  220 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAV  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            46 89998887653       248999999999998873211 11122222222211         13478999999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ..++..+.  ..|+.|++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            99987542  358899998764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.72  E-value=8.6e-17  Score=131.50  Aligned_cols=191  Identities=16%  Similarity=0.135  Sum_probs=135.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           17 TGACGGIGLETSRVLARAGARVVLADLPETDLAGAA--------ASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH--------HHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111        112457889999999999888887643     7999


Q ss_pred             EEEccCCC-c-c--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGRE-A-D--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~-~-~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||+||.. . .                    +..++++++    +  +..++|++||...+..           ..+..
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----------YDMST  157 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----------CSSCH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----------CCCCh
Confidence            99999864 1 0                    123344443    2  5679999999875422           12233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       .++++++.++||.++++.............+....+.         ..+.+++|+|+++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v  228 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELV  228 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            46 99999887763       3689999999999999864322223333333333222         2356799999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +.++....  ..|+.+++.+|.
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          229 CFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCcccCCcCCCEEEECCCc
Confidence            99987543  368999999883

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.72  E-value=7.9e-18  Score=136.90  Aligned_cols=197  Identities=13%  Similarity=0.133  Sum_probs=133.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-----ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865422111     111222346888999999998887777532     7999


Q ss_pred             EEEccCCCc---------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...                     .+..+++++    ++  +..++|++||...|..           ..+...
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  163 (260)
T 2zat_A           95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-----------FPNLGP  163 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----------CCCchh
Confidence            999998632                     112223333    32  5689999999876532           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++....... ......+...  .       ....+.+++|+|+++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~v  234 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES--L-------RIRRLGNPEDCAGIV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH--H-------TCSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc--C-------CCCCCCCHHHHHHHH
Confidence            6 89999888763       348999999999998874211000 0001111111  0       112478999999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCCccc
Q 023078          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ..++..+.  ..|+.+++.+|...+
T Consensus       235 ~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          235 SFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHcCcccCCccCCEEEECCCcccc
Confidence            99887643  268899999987655

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.72  E-value=9.7e-17  Score=129.60  Aligned_cols=191  Identities=15%  Similarity=0.142  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..        .....++.++.+|+++.+++.++++.. ++|++||+
T Consensus        20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG--------NALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999999999999866532111        112357889999999999998888754 69999999


Q ss_pred             cCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           80 NGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      ||...                    .+..++.+++    .  +..++|++||...+...           .+...| .+|
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK  160 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQANYCASK  160 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCSHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCCchhHHHH
Confidence            98632                    1233344432    2  56799999998765321           123346 999


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      ...+.+.+       ..+++++.++||.+.++.... ........+....+         ...+.+++|+|+++..++..
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~  230 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKIP---------LGTYGIPEDVAYAVAFLASN  230 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCC
Confidence            98887653       358999999999998874221 11222222222211         23577899999999999976


Q ss_pred             Cc--CCCceEEeeCCCc
Q 023078          206 EK--ASRQVFNISGEKY  220 (287)
Q Consensus       206 ~~--~~~~~~~~~~~~~  220 (287)
                      ..  ..|+.+++.+|..
T Consensus       231 ~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          231 NASYITGQTLHVNGGML  247 (249)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             ccCCccCcEEEECCCEe
Confidence            43  3689999988753

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.71  E-value=5e-17  Score=131.78  Aligned_cols=199  Identities=17%  Similarity=0.196  Sum_probs=130.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+....  .     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~-----~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A           10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAP--A-----LAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-----HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH--H-----HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986521  0     0111111346788999999999888887632     7999


Q ss_pred             EEEccCCCcc------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                        .++.++..++  +..++|++||...+...           .+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  151 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGKAAY  151 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCchhH
Confidence            9999986321                        1223344443  66899999998754221           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCC----cccCCCCCceeeeeeHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP----IPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~Dva~  197 (287)
                       .+|...+.+.+       ..+++++.++||.++++.... ..... ... ....    -.+.........+++++|+|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~-~~~-~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  228 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK-QIDDR-AAN-GGDPLQAQHDLLAEKQPSLAFVTPEHLGE  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH-HHHHH-HHH-TCCHHHHHHHHHTTTCTTCCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh-hcccc-ccc-ccchHHHHHHHHhccCCCCCCcCHHHHHH
Confidence             89999887763       258999999999998873110 00000 000 0000    000011112235889999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCc
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +++.++....  ..|+.|++.++..
T Consensus       229 ~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          229 LVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCCccCCCCCCEEEECCCcc
Confidence            9999887543  3588999988753

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.71  E-value=5.4e-17  Score=131.41  Aligned_cols=193  Identities=15%  Similarity=0.171  Sum_probs=129.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..        .+...++.++.+|++|.+++.++++..     .+|+
T Consensus        12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A           12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA--------AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865422110        111346888999999998888777632     5799


Q ss_pred             EEEccCCCcc------------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                        .++.++..++  + .++|++||...+..           ..+...|
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  151 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----------IEQYAGY  151 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC-----------CCCCccH
Confidence            9999986321                        1233444444  5 89999999876421           1123346


Q ss_pred             -cchHHHHHHHHh-------c--CCcEEEEccCceecCCCCCchhHHHHHH-HHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          130 -KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~~-------~--~~~~~ilr~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                       .+|...+.+.+.       .  +++++++|||.++++............. +.....      ......+.+++|+|++
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~p~~~~~~~~dvA~~  225 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK------LNRAGRAYMPERIAQL  225 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT------TBTTCCEECHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhc------cCccCCCCCHHHHHHH
Confidence             999998877632       3  8999999999998873100000000000 111000      0111247899999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++..+.  ..|+.+++.++.
T Consensus       226 ~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          226 VLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHcCccccCCCCcEEEECCCc
Confidence            999987643  368899998774

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.71  E-value=1.5e-17  Score=134.00  Aligned_cols=193  Identities=18%  Similarity=0.186  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|+++ .|+........     ..+.....++.++.+|+++.+++.++++..     ++|
T Consensus         7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999995 67654321110     112222356888999999999888887632     689


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    ++.++++++    +  +..++|++||...+.+.           .+...
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCcc
Confidence            99999986321                    223334433    2  56899999998653211           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++++|||.++++.... ....+........+         ...+++++|+|+++.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  220 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQPENVAGLVE  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCCHHHHHHHHH
Confidence            6 89998887653       358999999999998873211 11122222222211         124789999999999


Q ss_pred             HHhcCC---cCCCceEEeeCCC
Q 023078          201 QVLGNE---KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~---~~~~~~~~~~~~~  219 (287)
                      .++..+   ...|+.|++.++.
T Consensus       221 ~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHhCCCccCCcCCCEEEeCCCc
Confidence            998433   2358899998774

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=1.3e-17  Score=135.32  Aligned_cols=196  Identities=13%  Similarity=0.075  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+. .+..        .. ... .++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~--------~~-~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A           12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA--------EA-IGG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH--------HH-HTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH--------HH-hhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654 2111        01 113 78899999998888777632     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    ++.+++++    ++  +..++|++||...+...           .+...|
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  149 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAY  149 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCChhH
Confidence            9999986321                    22333333    22  56899999998653211           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHH-cCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..+++++.++||.+.++.     ....+.... ................+++++|+|++++
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~  224 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             99999887763       358999999999987652     111100000 0110000011112245789999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCcccH
Q 023078          201 QVLGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~s~  223 (287)
                      .++....  ..|+.+++.++...++
T Consensus       225 ~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHhCchhcCCCCCEEEECCCccccc
Confidence            9987642  3688999998876544

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.71  E-value=4.1e-17  Score=134.46  Aligned_cols=193  Identities=17%  Similarity=0.223  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++.....     ..+.....++.++.+|++|.+++.++++.     .++|+
T Consensus        50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999888755422111     11111235688899999999988888753     26999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+||....                    +..++.++    ++  +..++|++||...+...           .+...|
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  193 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------VGQANY  193 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CCCchH
Confidence            9999986321                    22223333    32  66899999998654221           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++++++||.+.++.... ....+........+.         ..+++++|+|++++.
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------GRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------CCCCCHHHHHHHHHH
Confidence             89998887653       358999999999998874321 122222232222111         237899999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|+.+++.+|.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            987643  368899998774

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.71  E-value=2.8e-17  Score=133.95  Aligned_cols=199  Identities=14%  Similarity=0.186  Sum_probs=133.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ........++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A           13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMK----ETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            8999999999999999999999999888655322211    111222357899999999999888887643     7999


Q ss_pred             EEEccCCC----------------------ccchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGRE----------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~----------------------~~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||+||..                      ..+..++++++    +  +..++|++||.+.++..         ...+..
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~~~~  159 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------GWIYRS  159 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------CCTTCH
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------CCCCCc
Confidence            99999931                      11233444443    3  66899999987543111         112234


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.++||.++++..... ...........         .....+.+++|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------~p~~r~~~~~dva~~v  229 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHN---------TPIGRSGTGEDIARTI  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhc---------CCCCCCcCHHHHHHHH
Confidence            56 99998887653       3689999999999998853222 22211111111         1123467899999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCCccc
Q 023078          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      +.++....  ..|+++++.+|....
T Consensus       230 ~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          230 SFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHcCcccCCCCCcEEEEcCceeec
Confidence            99997643  368999999886543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.71  E-value=1.4e-17  Score=135.79  Aligned_cols=201  Identities=15%  Similarity=0.221  Sum_probs=134.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+ .....++.++.+|++|.+++.++++.     ..+|
T Consensus        20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   94 (265)
T 1h5q_A           20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT-----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS   94 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH-----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH-----HHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999765422111     111 11135788999999999888887763     1489


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhCC------C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~~------~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      ++||+||....                    ++.++++++.      + ..++|++||...+.....    ......+..
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~  170 (265)
T 1h5q_A           95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQV  170 (265)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccccc
Confidence            99999986321                    2333444432      2 478999999865422110    011123344


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++++|||.++++.... ..+..........+.         ..+++++|+|+++
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  240 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPL---------NRFAQPEEMTGQA  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSCBCGGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc-cchhHHHHHHhcCcc---------cCCCCHHHHHHHH
Confidence            57 99999988763       348999999999999884321 112222222222211         2367899999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCCc
Q 023078          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +.++..+.  ..|+.|++.+|..
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhhccCchhcCcCcEEEecCCEe
Confidence            99987543  3688999998754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.71  E-value=5.9e-18  Score=137.66  Aligned_cols=196  Identities=14%  Similarity=0.116  Sum_probs=131.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.+...+..     ..+.....++.++.+|++|++++.++++.      .++|
T Consensus        15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            799999999999999999999999999865522111     11111234678899999999888887742      2799


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||...                    .++.++++++    +  +..++|++||...+..           ..+...
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPYEAV  158 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCcch
Confidence            9999998632                    1233344443    2  5689999999865321           112234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHH---HHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFH---RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++...... ......   .+....         ....+.+++|+|
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA  229 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------ALRRMGEPKELA  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CCCCCCCHHHHH
Confidence            6 99999988763       34899999999999776210000 000011   111111         112478999999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++++.++....  ..|+.+++.+|...
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          230 AMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCccccCCCCCEEEECCCccc
Confidence            99999886532  36889999888654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.70  E-value=7.9e-17  Score=130.75  Aligned_cols=194  Identities=13%  Similarity=0.152  Sum_probs=126.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+...        +...++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A           13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA--------ELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998766332221        11357889999999998888877643     7999


Q ss_pred             EEEccCCCcc------------------------chHHHHHhC----C--------CCCcEEEEeeeeEeecCCCCCCCC
Q 023078           76 VYDINGREAD------------------------EVEPILDAL----P--------NLEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        76 vi~~a~~~~~------------------------~~~~l~~a~----~--------~~~~~i~~Ss~~~y~~~~~~~~~e  119 (287)
                      +||+||....                        +..++++++    +        +..++|++||...+...       
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-------  157 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-------  157 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-------
Confidence            9999986421                        122233332    2        23579999998764321       


Q ss_pred             CCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       120 ~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                          .+...| .+|...+.+.+       ..+++++.++||.+.++.... ........+....+.        ...+.+
T Consensus       158 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~--------~~r~~~  224 (257)
T 3tpc_A          158 ----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAASVPF--------PPRLGR  224 (257)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSS--------SCSCBC
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHhcCCC--------CCCCCC
Confidence                123346 99998887652       368999999999998874211 111111111111110        024778


Q ss_pred             HHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      ++|+|+++..++......|+.+++.+|..++
T Consensus       225 ~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          225 AEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            9999999999998755678999999886554

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.70  E-value=4.1e-17  Score=132.87  Aligned_cols=184  Identities=16%  Similarity=0.162  Sum_probs=126.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+...                ..++.++.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                246788999999999888877632     6999


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..+    ++..++  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------TKNASAY  146 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------CCCchhH
Confidence            9999986321                    2222    333333  5679999999876421           1123346


Q ss_pred             -cchHHHHHHHH----hcC--CcEEEEccCceecCCCCCch------hH----HHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          130 -KGKLNTESVLE----SKG--VNWTSLRPVYIYGPLNYNPV------EE----WFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       130 -~~k~~~E~~~~----~~~--~~~~ilr~~~v~g~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                       .+|...+.+.+    +.+  ++++.++||.+.++......      ..    .....+....         ....++++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~p  217 (264)
T 2dtx_A          147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH---------PMQRIGKP  217 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC---------CCCCCcCH
Confidence             89999887763    222  89999999998765210000      00    0111111111         11247899


Q ss_pred             HHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          193 KDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +|+|++++.++....  ..|+.+++.++..
T Consensus       218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          218 QEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            999999999987542  3688999988753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=8.2e-18  Score=137.35  Aligned_cols=206  Identities=15%  Similarity=0.162  Sum_probs=134.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+...  ..++.++.+|++|++++.++++..     .+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (267)
T 2gdz_A           13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   87 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421110     001000  235788999999999888887632     58


Q ss_pred             cEEEEccCCCcc----------------chHHHHHhCC--C---CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           74 DVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        74 d~vi~~a~~~~~----------------~~~~l~~a~~--~---~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      |++||+||....                .++.+++.++  +   ..++|++||...+...           .+...| .+
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~s  156 (267)
T 2gdz_A           88 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQPVYCAS  156 (267)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTCHHHHHH
T ss_pred             CEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCCchHHHH
Confidence            999999986421                1344455554  2   5789999998764321           122346 88


Q ss_pred             hHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc-ccCCCCCceeeeeeHHHHHHHHHH
Q 023078          132 KLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       132 k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      |...+.+.+         ..+++++.++||.+.++.... ....  .....-... ...........+++++|+|++++.
T Consensus       157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~  233 (267)
T 2gdz_A          157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE--ENMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH--HHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc--cccchhhhHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            988876653         358999999999987762100 0000  000000000 000000112347899999999999


Q ss_pred             HhcCCcCCCceEEeeCCCcccHHH
Q 023078          202 VLGNEKASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~s~~~  225 (287)
                      ++......|+++++.++..+++.|
T Consensus       234 l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          234 LIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HhcCcCCCCcEEEecCCCcccccC
Confidence            998766678999999988766654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.70  E-value=2.1e-17  Score=136.55  Aligned_cols=197  Identities=19%  Similarity=0.221  Sum_probs=133.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+...    ........++.++.+|++|++++.++++..     ++|+
T Consensus        53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998764221110    111222457889999999998888877642     7899


Q ss_pred             EEEccCCCc---------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||...                     .+..++++++    +...++|++||...+....           +...| 
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~Y~  197 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------TLIDYS  197 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------TCHHHH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------CChhHH
Confidence            999998631                     1233344443    3445899999987653221           12346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..++||.++++.............+         ........+.+++|+|++++.+
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHH
Confidence            99999887753       3589999999999988731110011111111         1112233567899999999999


Q ss_pred             hcCCc--CCCceEEeeCCCcc
Q 023078          203 LGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~~~  221 (287)
                      +....  ..|+.+++.+|..+
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            87543  36889999887543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.70  E-value=4.2e-17  Score=134.00  Aligned_cols=204  Identities=19%  Similarity=0.209  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+... ..++.++.+|++|.+++.++++..     ++|
T Consensus        31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999999999995433211110    111111 357889999999999888877642     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +..++++++    +  +..++|++||...+...           .....
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  175 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS-----------PFKSA  175 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----------CCchH
Confidence            99999997321                    233344443    2  56789999998653211           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHH-HHHHcCCC-cccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRP-IPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+       ..++++..++||.+.++........... ........ .....+......+.+++|+|++
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            6 99999887753       3589999999999998742211100000 00000000 0011223344568999999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++....  ..|+.+++.+|.
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCc
Confidence            999987643  368999998874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.70  E-value=1.4e-16  Score=131.56  Aligned_cols=196  Identities=17%  Similarity=0.194  Sum_probs=135.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhc-CCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     .++.... .++.++.+|++|.+++.++++..     .+|
T Consensus        47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  121 (293)
T 3rih_A           47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT-----AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD  121 (293)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999876532211     1111112 47889999999998888776643     789


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||...                    .+..++++++    +  +..++|++||...+.          ....+...
T Consensus       122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~~~~~  191 (293)
T 3rih_A          122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYPGWSH  191 (293)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCCCCHH
Confidence            9999998632                    1344555655    2  678999999976310          00112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..|++++.++||.++++... .....+...+....++         .-+..++|+|+++.
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV-DMGEEYISGMARSIPM---------GMLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-HTCHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh-hccHHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            6 99999887753       36899999999999987321 1112233333443322         12456899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCcc
Q 023078          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      .++....  ..|+.+++.+|..+
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            9986532  36899999988654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.70  E-value=9.9e-17  Score=129.91  Aligned_cols=191  Identities=16%  Similarity=0.146  Sum_probs=129.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+...        +...++.++.+|++|++++.++++..     ++|+
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A           11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--------ELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655321110        11245788999999998888777632     7999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||...+...           .+...|
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  151 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCchhH
Confidence            9999986321                    1    123444444  67899999998754211           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeee-eHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..+++++.++||.++++.     .    ..... ..............+. +++|+|++++
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~----~~~~~-~~~~~~~~~~p~~~~~~~~~dvA~~v~  221 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----T----AETGI-RQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----H----HHHTC-CCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-----c----cccch-hHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence             89999887753       358999999999998872     1    11111 1000000111112366 8999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCc
Q 023078          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .++....  ..|+.+++.++..
T Consensus       222 ~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          222 KLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCCCCCEEEECCCcc
Confidence            9987542  3688999988754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.70  E-value=1.5e-16  Score=128.56  Aligned_cols=192  Identities=14%  Similarity=0.053  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+...     .          ..++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X           13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E----------QYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S----------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h----------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998642     1          123788899999999888887632     6999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++++++    +  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-----------RIGMSAY  146 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCCchH
Confidence            9999986321                    223344443    2  6789999999875421           1123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHH-HHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                       .+|...+.+.+       ..++++++++||.++++....... ..... .+.....  ..........+.+++|+|+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCcCHHHHHHHH
Confidence             99999888763       358999999999999884221100 00000 0000000  000001122478899999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCCc
Q 023078          200 VQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +.++....  ..|+.+++.+|..
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          225 LFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCCCCEEEECCCcc
Confidence            99987642  3688999988754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.70  E-value=7e-17  Score=132.19  Aligned_cols=195  Identities=13%  Similarity=0.114  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|++++.++++.      -++|
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            799999999999999999999999999865422111     11222235788899999999888877742      3799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +..++++++    +  +..++|++||...+...           .+...
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~  170 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------PSVSL  170 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------CCcch
Confidence            99999986321                    223344443    2  56899999998765321           12334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-----HHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      | .+|...+.+.+       ..+++++.++||.++++.......     ......+....+.         ..+.+++|+
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dv  241 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEV  241 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            6 99999887753       358999999999999885221100     1111122211111         136789999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      |+++..++....  ..|+.+++.+|..
T Consensus       242 A~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          242 SALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCccccCcCCCEEEECCCcc
Confidence            999999886532  3688999988754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.70  E-value=3.8e-17  Score=132.79  Aligned_cols=186  Identities=16%  Similarity=0.160  Sum_probs=130.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865522111        011134788999999999888877632     7999


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    ++    +.+++.++  +..++|++||...+...           .+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY  153 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCchhH
Confidence            9999986321                    12    33444443  67899999998764221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++|||.++++...  .         ....+.    ......+.+++|+|+++..
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~----~~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF----QTALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS----CCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH----hCccCCCCCHHHHHHHHHH
Confidence             89999887763       36899999999999988421  0         001110    0112346889999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  ..|+.|++.++..
T Consensus       219 l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhCccccCCcCCEEEECCCee
Confidence            987532  3588999998864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.70  E-value=7.5e-17  Score=130.87  Aligned_cols=196  Identities=14%  Similarity=0.140  Sum_probs=133.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|+++ .|+.....+.     ...+.....++.++.+|++|.+++.++++..     ++|
T Consensus        10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A           10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALET-----AEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999997 6665432111     1112222457899999999999888887643     689


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||...                    .++.++.+++    +  +..++|++||...+..           ..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  153 (258)
T 3oid_A           85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----------LENYTT  153 (258)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----------CCCcHH
Confidence            9999998632                    1233334432    2  5679999999875421           122344


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       ..++++..++||.+..+...... ...+........+.         ..+.+++|+|+++
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v  224 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMVEIKDMVDTV  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            6 99999887763       35899999999999887421111 11222222222221         2467899999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCCcc
Q 023078          200 VQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      +.++....  ..|+.+++.+|...
T Consensus       225 ~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          225 EFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             HHHhCcccCCccCCEEEECCCccC
Confidence            99987643  36899999988653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.69  E-value=6.5e-17  Score=131.76  Aligned_cols=195  Identities=17%  Similarity=0.190  Sum_probs=133.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.+...+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-----KQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999866532211     122222467899999999999888877642     7899


Q ss_pred             EEEccCCC-c--------------------cchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGRE-A--------------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||.. .                    .+..++++++.     ...++|++||...+..           ..+...|
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  160 (264)
T 3ucx_A           92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS-----------QAKYGAY  160 (264)
T ss_dssp             EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC-----------CCccHHH
Confidence            99999763 1                    12334445442     2369999999875421           1122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch----------hHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                       .+|...+.+.+       ..++++..++||.++++......          ...+........         ....+.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  231 (264)
T 3ucx_A          161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS---------DLKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---------SSSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC---------CcccCCC
Confidence             99998887753       36899999999999887311100          011122222221         2235678


Q ss_pred             HHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++|+|++++.++....  ..|+.+++.+|..
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999999987532  3789999988864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.69  E-value=1e-16  Score=130.39  Aligned_cols=196  Identities=18%  Similarity=0.200  Sum_probs=133.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhc-CCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..     .++.... .++.++.+|++|++++.++++..     ++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   90 (262)
T 3pk0_A           16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV-----ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID   90 (262)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999999999876532111     1111112 47889999999998888877632     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    ++.+++++    ++  +..++|++||.....          ....+...
T Consensus        91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~~~~~  160 (262)
T 3pk0_A           91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYPGWSH  160 (262)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCCCChh
Confidence            99999986321                    23333333    32  567999999975310          01112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.++++.... ....+...+....+.         ..+.+++|+|+++.
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            6 99999888763       368999999999998873211 112233333333222         23567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCcc
Q 023078          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      .++....  ..|+.+++.+|..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            9987543  37899999988654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.69  E-value=9e-17  Score=131.19  Aligned_cols=193  Identities=19%  Similarity=0.191  Sum_probs=133.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEV----VAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999654322211    1122222457889999999999888877643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.+++    .  +..++|++||...+...           .....|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  178 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN-----------PGQANY  178 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCchhH
Confidence            9999987421                    233334432    2  56799999998754221           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+.++.....    .........+.         ..+.+++|+|+++..
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~p~---------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----AAEKLLEVIPL---------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----HHHHHGGGCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----cHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             99998887653       3689999999999988743211    11222222211         246778999999999


Q ss_pred             HhcCCc---CCCceEEeeCCCcc
Q 023078          202 VLGNEK---ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~---~~~~~~~~~~~~~~  221 (287)
                      ++..+.   ..|+.+++.+|..+
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HhCCcccCCCcCCEEEECCCeec
Confidence            997632   36899999988654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.69  E-value=9.5e-17  Score=131.79  Aligned_cols=211  Identities=13%  Similarity=0.121  Sum_probs=136.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC-------chhhhhhcCCcEEEEecCCChHHHHhhhccC--
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--   71 (287)
                      |||+|+||+++++.|+++|++|++++|+............       .........++.++.+|++|++++.++++..  
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   98 (278)
T 3sx2_A           19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD   98 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999997432111110000       1112223467899999999999888887642  


Q ss_pred             ---CccEEEEccCCCcc----------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           72 ---GFDVVYDINGREAD----------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 ---~~d~vi~~a~~~~~----------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                         ++|++||+||....                +..++++++    .  + ..++|++||...+....       ....+
T Consensus        99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~~~~  171 (278)
T 3sx2_A           99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-------SADPG  171 (278)
T ss_dssp             HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-------CSSHH
T ss_pred             HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-------cCCCC
Confidence               79999999997421                233344442    2  2 56899999987532210       01112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHH-HHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..+++++.++||.+.++............ ................ ..+.+++|+|
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA  250 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence            2346 99999887753       35799999999999998643322222222 2222221112222222 5788999999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++....  ..|+.+++.+|.
T Consensus       251 ~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          251 NAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhCcccccccCCEEeECCCc
Confidence            99999986533  368999998875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.69  E-value=1.2e-16  Score=128.76  Aligned_cols=193  Identities=16%  Similarity=0.216  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEec-CCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++| +..+.. .+    ...+.....++.++.+|++|++++.++++..     ++|
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A           10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN-EV----VDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999 433321 11    0111122356888999999999888877632     699


Q ss_pred             EEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +    ++.++..++  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----------PGQAN  153 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----------CCCch
Confidence            99999986421                    1    223333333  67899999998653211           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++.... ........+....+         ...+++++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEMLKLIP---------AAQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHHHTCT---------TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            6 89998877642       468999999999998874221 11111122222111         124789999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            9986532  368899998774

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.69  E-value=7.2e-17  Score=133.12  Aligned_cols=219  Identities=16%  Similarity=0.142  Sum_probs=137.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC-------chhhhhhcCCcEEEEecCCChHHHHhhhccC--
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-------DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--   71 (287)
                      |||+|+||+++++.|+++|++|++++|+............       .........++.++.+|++|.+++.++++..  
T Consensus        16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   95 (287)
T 3pxx_A           16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA   95 (287)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            7999999999999999999999999997433211111100       0111222457889999999999888777642  


Q ss_pred             ---CccEEEEccCCCcc------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           72 ---GFDVVYDINGREAD------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        72 ---~~d~vi~~a~~~~~------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                         ++|++||+||....                  +..++++++    ++..++|++||...+......+..+..+..+.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  175 (287)
T 3pxx_A           96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG  175 (287)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred             HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence               79999999986321                  233344443    34568999999876543322222222222223


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcC---CCc-----ccCCCCCceeeee
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RPI-----PIPGSGIQVTQLG  190 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~i  190 (287)
                      ..| .+|...+.+.+       ..++++..++||.+..+.......   .......   ...     ...........+.
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T 3pxx_A          176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM---YRQFRPDLEAPSRADALLAFPAMQAMPTPYV  252 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHGGGGCSSSCSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch---hhhhccccccchhHHHHhhhhhhcccCCCCC
Confidence            346 89999887753       348999999999998885322110   0111000   000     0000011114688


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      +++|+|++++.++....  ..|+.+++.+|..++
T Consensus       253 ~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          253 EASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            99999999999986532  368999999886543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.69  E-value=2.9e-16  Score=126.74  Aligned_cols=192  Identities=14%  Similarity=0.137  Sum_probs=125.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCC-ccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|++ +...+        .+.....++.++.+|++|++++.++++.     -++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A           13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999987 44221        1112235688899999999888877642     2799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +..++.++    ++  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTH  153 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCchh
Confidence            99999986321                    12222333    43  67899999998764321           12334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++.......... .....  .+.     .....+.+++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~--~~~-----~~~~~~~~p~dva~~~~  225 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLP--NML-----QAIPRLQVPLDLTGAAA  225 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT-----SSSCSCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHH--Hhh-----CccCCCCCHHHHHHHHH
Confidence            6 89999887763       358999999999998874210110000 00000  010     11124789999999999


Q ss_pred             HHhcCC--cCCCceEEeeCCC
Q 023078          201 QVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~  219 (287)
                      .++...  ...|+.+++.++.
T Consensus       226 ~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          226 FLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHTSGGGTTCCSCEEEESSSC
T ss_pred             HHcCcccCCCCCcEEEECCCc
Confidence            998753  2368899998774

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.69  E-value=1e-16  Score=131.76  Aligned_cols=204  Identities=14%  Similarity=0.069  Sum_probs=131.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCC--------CCchhhhhhcCCcEEEEecCCChHHHHhhhccC-
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-   71 (287)
                      |||+|+||+++++.|+++|++|++++|+..........        ...........++.++.+|++|.+++.++++.. 
T Consensus        21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (280)
T 3pgx_A           21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM  100 (280)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            79999999999999999999999999853211000000        001111222457889999999999888887642 


Q ss_pred             ----CccEEEEccCCCcc--------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCC
Q 023078           72 ----GFDVVYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        72 ----~~d~vi~~a~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~  120 (287)
                          ++|++||+||....                    +..++++++    +  + ..++|++||...+..         
T Consensus       101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  171 (280)
T 3pgx_A          101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA---------  171 (280)
T ss_dssp             HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC---------
Confidence                79999999997321                    233344442    2  3 568999999875321         


Q ss_pred             CCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc--cc-CCCCCceeee
Q 023078          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--PI-PGSGIQVTQL  189 (287)
Q Consensus       121 ~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~  189 (287)
                        ......| .+|...+.+.+       ..+++++.++||.+.++.......   ..........  .+ ....... .+
T Consensus       172 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-r~  245 (280)
T 3pgx_A          172 --TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAM---MEIFARHPSFVHSFPPMPVQPN-GF  245 (280)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHH---HHHHHHCGGGGGGSCCBTTBCS-SC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhh---hhhhhcCchhhhhhhhcccCCC-CC
Confidence              1123346 99999887653       368999999999999985332111   1111111110  00 0111112 48


Q ss_pred             eeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .+++|+|++++.++....  ..|+.+++.+|.
T Consensus       246 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          246 MTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            899999999999987543  368899998874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.68  E-value=1.1e-16  Score=129.97  Aligned_cols=197  Identities=15%  Similarity=0.174  Sum_probs=132.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A           12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-----LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532111     111122357889999999998888877643     7899


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC-----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~-----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...                    .+..++.+++     +  +..++|++||...+...           .....
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  155 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----------PGVIH  155 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------CCcHH
Confidence            999998532                    1233333332     2  46789999998654211           12234


Q ss_pred             c-cchHHHHHHHH--------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~--------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+        ..+++++.++||.+.++......  ...+........         ....+.+++|+|+
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~  226 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV---------PLGRLGTPEEIAG  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS---------TTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC---------CCCCCcCHHHHHH
Confidence            6 89998876642        35899999999999888532211  000111111111         1124678999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      +++.++....  ..|+.+++.+|..++
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          227 LAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHcCchhcCccCCEEEECCCcccC
Confidence            9999987643  378999999887654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.68  E-value=1.2e-16  Score=130.30  Aligned_cols=197  Identities=17%  Similarity=0.218  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..     ..+...  ..++.++.+|++|.+++.++++..     ++
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865422111     111111  356888999999999888877632     68


Q ss_pred             cEEEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      |++||+||....                     +    ++.++..++  +..++|++||...+..           ..+.
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  162 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------IGNQ  162 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------CSSB
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------CCCC
Confidence            999999986422                     0    122334443  6789999999865321           1123


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-------chhHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      ..| .+|...+.+.+       ..+++++.++||.++++....       .........+....         ....+.+
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  233 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN---------PSKRYGE  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC---------TTCSCBC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC---------CCCCCcC
Confidence            346 89998887753       358999999999998762100       00000000111111         1124678


Q ss_pred             HHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ++|+|++++.++..+.  ..|+.+++.+|...+
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            9999999999987542  368899998886543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.68  E-value=6e-17  Score=132.26  Aligned_cols=195  Identities=16%  Similarity=0.153  Sum_probs=133.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++..+.+|++|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-----AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865532111     122223457889999999998888877643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.+++    .  +..++|++||...+...           .+...|
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  177 (270)
T 3ftp_A          109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN-----------PGQVNY  177 (270)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------CCchhH
Confidence            9999986321                    233344442    2  55789999998754221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+... .........+....+         ...+.+++|+|++++.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK-GLPQEQQTALKTQIP---------LGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-HSCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh-hcCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence             99998887653       35899999999998776210 011112222222221         2346789999999999


Q ss_pred             HhcCC--cCCCceEEeeCCCcc
Q 023078          202 VLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      ++...  ...|+.+++.+|..+
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          248 LASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCcEEEECCCccc
Confidence            88643  236899999988654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.68  E-value=1e-16  Score=131.62  Aligned_cols=202  Identities=15%  Similarity=0.143  Sum_probs=136.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-----DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532111     111222457888999999998888877632     7999


Q ss_pred             EEEccCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...                     .+..++.+++    +  +..++|++||...+..          ...+...
T Consensus        89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~  158 (280)
T 3tox_A           89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GFAGVAP  158 (280)
T ss_dssp             EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CCTTCHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CCCCchh
Confidence            999998531                     1223333332    2  4569999999765311          1112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch---hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       ..++++..++||.+.++......   .+.....+....+         ...+.+++|+|+
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~  229 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---------LKRIARPEEIAE  229 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------cCCCcCHHHHHH
Confidence            6 99999887753       35899999999999988532211   1222222232222         124678999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCcccHHHH
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~~s~~~i  226 (287)
                      +++.++....  ..|+.+++.+|..++...+
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~~~~~a~  260 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGASVTKAAE  260 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCC---
T ss_pred             HHHHHhCccccCCcCcEEEECCCcccccccc
Confidence            9999997643  3689999999977655333

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.68  E-value=1.6e-17  Score=136.27  Aligned_cols=193  Identities=20%  Similarity=0.256  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     111222356888999999998888777632     6999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC------C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL------P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~------~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||+||....                    +..++++++      +  +..++|++||...+..           ..+..
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  171 (277)
T 2rhc_B          103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAA  171 (277)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----------CCCCc
Confidence            9999986321                    222333332      2  4579999999864311           11223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-----------HHHHHHHHcCCCcccCCCCCceee
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      .| .+|...+.+.+       ..++++++++||.+.++.... ..           ......+....         ....
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r  241 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITARV---------PIGR  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHHS---------TTSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHhcC---------CCCC
Confidence            46 89998887763       247999999999998763110 00           00111111111         1124


Q ss_pred             eeeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          189 LGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++++|+|++++.++..+.  ..|+.+++.+|.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            7899999999999987542  368899998874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.68  E-value=1.5e-16  Score=129.33  Aligned_cols=199  Identities=15%  Similarity=0.216  Sum_probs=128.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~----~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+...  ..++.++.+|++|++++.++++.    .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A           13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-----SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865422111     111111  12688999999999888877762    2499


Q ss_pred             EEEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +.    +.++..++  +..++|++||...+..           ..+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  156 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-----------WQDLAL  156 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-----------CCCCch
Confidence            99999986321                    11    33444443  6789999999876422           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH-----HHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      | .+|...+.+.+       ..+++++.++||.++++........     ........ ..+   ........+.+++|+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~p~~r~~~~~dv  232 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEAL-KSM---ASRIPMGRVGKPEEL  232 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC---------------------------CCTTSSCCCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHH-HHH---HhcCCCCCccCHHHH
Confidence            6 89998887653       3589999999999999853211000     00000000 000   000111236789999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      |++++.++...  ...|+.+++.+|.
T Consensus       233 a~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          233 ASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999998753  2368899998774

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.68  E-value=2.1e-16  Score=128.84  Aligned_cols=194  Identities=13%  Similarity=0.119  Sum_probs=127.1

Q ss_pred             CCccc-chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+| .||+++++.|+++|++|++++|+.....+..     .++.+ ...++.++.+|++|.+++.++++..     .+
T Consensus        28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (266)
T 3o38_A           28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR-----DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL  102 (266)
T ss_dssp             SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence            79998 5999999999999999999999876532211     11111 1257899999999999888887643     78


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHhC----C---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD--------------------EVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a~----~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      |++||+||....                    +..++.+++    +   +..++|++||...+..           ..+.
T Consensus       103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~  171 (266)
T 3o38_A          103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA-----------QHSQ  171 (266)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-----------CTTC
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-----------CCCC
Confidence            999999996321                    223333332    1   3467999999765321           1233


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|...+.+.+       ..++++..++||.+..+.............+.         .......+.+++|+|++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLA---------SDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHH---------hcCCcCCCCCHHHHHHH
Confidence            456 99999887763       36899999999999877421111111111111         11223356789999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++....  ..|+.+++.+|.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            999987532  368899998764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.68  E-value=7.7e-17  Score=131.69  Aligned_cols=198  Identities=13%  Similarity=0.167  Sum_probs=131.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++++........    .........++.++.+|++|.+++.++++..     ++|+
T Consensus        31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTW----LMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH----HHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999996554321111    0111222467899999999998888877643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++++++    .  +..++|++||...+...           .+...|
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  175 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA-----------FGQANY  175 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTBHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-----------CCcchH
Confidence            9999986321                    223333332    2  56799999997654221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+..... .    .........    .......+.+++|+|+++..
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~----~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-P----QDVLEAKIL----PQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-c----hhHHHHHhh----hcCCcCCccCHHHHHHHHHH
Confidence             99998887653       3589999999999988742211 1    111111111    11112346789999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCccc
Q 023078          202 VLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ++....  ..|+.+++.+|..++
T Consensus       247 L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HhCCCcCCeeCcEEEECCCEeCc
Confidence            987643  368999999886543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.68  E-value=1e-16  Score=130.58  Aligned_cols=186  Identities=17%  Similarity=0.172  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+....                .....+.+|+++.+.+.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS----------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            89999999999999999999999999976552                12234578999988777766532     7999


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||...                    .+..++++++    +  +..++|++||...+..           ..+...|
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  166 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----------GPGHALY  166 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCChHH
Confidence            999999742                    1233344443    3  6779999999865421           1123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc------hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                       .+|...+.+.+       ..+++++.++||.+.++.....      ........+....         ....+.+++|+
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedv  237 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---------PLGRIAEPEDI  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---------CCCCCcCHHHH
Confidence             99999887753       3589999999999987631000      0001112222221         12356789999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      |++++.++....  ..|+.+++.+|..++
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          238 ADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            999999987643  368999999886543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.68  E-value=1e-16  Score=130.37  Aligned_cols=202  Identities=17%  Similarity=0.158  Sum_probs=127.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc-ccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+... ..+..     ..+... ..++.++.+|++|.+++.++++..     ++
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A           10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-----HHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            8999999999999999999999999998654 22111     111111 346888999999999888877632     69


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||+||....                    +..+++++    ++  +..++|++||...+...           .+..
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  153 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------ANKS  153 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------CCCc
Confidence            999999986321                    12223333    22  56899999998754211           1233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHH--HcCCCcccC-CCCCceeeeeeHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIP-GSGIQVTQLGHVKDLA  196 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~i~~~Dva  196 (287)
                      .| .+|...+.+.+       ..+++++.++||.+.++...... .......  ......... ........+.+++|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI-SALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh-hhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence            46 99999887763       24899999999999887422110 0000000  000000000 0000113578999999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++....  ..|+.+++.+|.
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCc
Confidence            99999987532  368899998874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.67  E-value=1e-16  Score=129.08  Aligned_cols=184  Identities=15%  Similarity=0.123  Sum_probs=127.3

Q ss_pred             CCcccchHHHHHHHHHHCCC-------eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---   70 (287)
                      |||+|+||+++++.|+++|+       +|++++|+........     ..+.....++.++.+|++|.+++.++++.   
T Consensus         8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-----HHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            79999999999999999999       9999999865422110     11111235688999999999888887763   


Q ss_pred             --CCccEEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           71 --KGFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        71 --~~~d~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                        -++|+|||+||...                    .++.++++++    +  +..++|++||...+..           
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  151 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----------  151 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC-----------
Confidence              16999999998632                    1233344443    2  6789999999876422           


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+...| .+|...+.+.+       ..+++++++|||.++++......           .      . . ...+++++|
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~------~-~-~~~~~~~~d  212 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----------D------E-M-QALMMMPED  212 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----------S------T-T-GGGSBCHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----------c------c-c-cccCCCHHH
Confidence            1223446 99999887752       35899999999999998421100           0      0 0 126789999


Q ss_pred             HHHHHHHHhcCCcC--CCceEEeeCCC
Q 023078          195 LARAFVQVLGNEKA--SRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~~~--~~~~~~~~~~~  219 (287)
                      +|++++.++..+..  .++++...++.
T Consensus       213 va~~~~~l~~~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          213 IAAPVVQAYLQPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             HHHHHHHHHhCCccccchheEEecccc
Confidence            99999999986532  34555555444

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.67  E-value=1.2e-16  Score=129.52  Aligned_cols=199  Identities=18%  Similarity=0.163  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     111112346888999999998888877632     7999


Q ss_pred             EEEccCCCcc--------------------chHHH----HHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPI----LDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l----~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +..++    +..++  + ..++|++||...+..           ..+...
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  151 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------NPELAV  151 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------CCCchh
Confidence            9999986321                    12222    33332  4 679999999764311           112234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc-----CCC-cccCCCCCceeeeeeHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-----GRP-IPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D  194 (287)
                      | .+|...+.+.+       ..+++++.++||.+.++.     ...+......     ... ............+.+++|
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  226 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch-----hhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHH
Confidence            6 89998887753       358999999999998762     1111100000     000 000000001124789999


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +|+++..++....  ..|+.+++.+|..
T Consensus       227 vA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          227 VAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            9999999987542  3688999988753

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.67  E-value=1.9e-16  Score=130.01  Aligned_cols=197  Identities=17%  Similarity=0.243  Sum_probs=122.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..    ..++.....++.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH----HHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999997544321111    1122222467899999999998888777643     7999


Q ss_pred             EEEccCCC--c--------------------cchHHHHHh----CC--C---CCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           76 VYDINGRE--A--------------------DEVEPILDA----LP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~--~--------------------~~~~~l~~a----~~--~---~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +||+||..  .                    .+..+++++    +.  +   ..++|++||...+...           .
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~  179 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-----------P  179 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----------C
Confidence            99999872  1                    112223333    22  2   5689999998764221           1


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      +...| .+|...+.+.+       ..++++..++||.+..+.... ...........        .......+.+++|+|
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~--------~~~p~~r~~~pedvA  250 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-VSGKYDGLIES--------GLVPMRRWGEPEDIG  250 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-cchhHHHHHhh--------cCCCcCCcCCHHHHH
Confidence            12346 99999887753       368999999999998874211 11111111111        011223467899999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++++.++....  ..|+.+++.+|..+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          251 NIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccc
Confidence            99999987643  36899999988643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.67  E-value=3.7e-16  Score=128.03  Aligned_cols=194  Identities=15%  Similarity=0.175  Sum_probs=132.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA--------NEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111        112357889999999998888877643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.++    ++  +..++|++||...+..           ..+...|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  173 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-----------IADRTAY  173 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-----------CCCChhH
Confidence            9999996321                    22223333    33  5579999999875421           1223346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       .+|...+.+.+       ..++++..++||.+..+....     ..............         ....+.+++|+|
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~pedvA  244 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA---------VMDRMGTAEEIA  244 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS---------TTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC---------cccCCcCHHHHH
Confidence             99999887753       358999999999987762000     00001111122211         123467899999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ++++.++....  ..|+.+++.+|..++
T Consensus       245 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          245 EAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            99999987543  368999999887543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.67  E-value=1.6e-16  Score=131.24  Aligned_cols=200  Identities=14%  Similarity=0.048  Sum_probs=131.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+...        +...++.++.+|++|.+++.++++.. ++|++||+
T Consensus        22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR--------TMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--------TSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998766332221        11357899999999999999988754 68999999


Q ss_pred             cCCCc------------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCC-CCCC-CCCCCCCCccc-cchHHHH
Q 023078           80 NGREA------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC-ETDTVDPKSRH-KGKLNTE  136 (287)
Q Consensus        80 a~~~~------------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~-~~~~-e~~~~~p~~~~-~~k~~~E  136 (287)
                      ||...                  .+..++++++.  ..+|+|++||...+..... .... +..+..+...| .+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            98631                  23455666654  4469999999886643221 1111 11223334457 9999988


Q ss_pred             HHHH-------hcC--CcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          137 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       137 ~~~~-------~~~--~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      .+.+       ..+  ++++.++||.+..+..... ...+...+..         ....+-..+++|+|++++.++..+.
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDALMS---------AATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHHHH---------HHHHHHhCCHHHHHHHHHHHHcCCC
Confidence            7653       235  9999999999977642111 0001111000         0011223458999999999998765


Q ss_pred             CCCceEEeeCC
Q 023078          208 ASRQVFNISGE  218 (287)
Q Consensus       208 ~~~~~~~~~~~  218 (287)
                      ..|+.+++.+|
T Consensus       244 ~~G~~~~vdgG  254 (291)
T 3rd5_A          244 PGDSFVGPRFG  254 (291)
T ss_dssp             CTTCEEEETTS
T ss_pred             CCCceeCCccc
Confidence            57788887654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.67  E-value=5.4e-16  Score=126.58  Aligned_cols=185  Identities=15%  Similarity=0.168  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+....               ...+..+.+|++|.+++.++++..     ++|+
T Consensus        20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986652               135678899999999888877643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +...+.++    ++  +..++|++||...+...           .+...|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-----------KNAAAY  153 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCChhH
Confidence            9999986321                    22233333    22  56799999998765321           122346


Q ss_pred             -cchHHHHHHHH----h--cCCcEEEEccCceecCCCCC----------chhHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          130 -KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       130 -~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                       .+|...+.+.+    +  .++++..++||.+.++....          .........+....         ....+.++
T Consensus       154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p  224 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH---------PMGRIGRP  224 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS---------TTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC---------CCCCCcCH
Confidence             99999888763    2  27999999999998762100          00011111111111         12346789


Q ss_pred             HHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          193 KDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +|+|++++.++....  ..|+.+++.+|..
T Consensus       225 edvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          225 EEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            999999999987543  3689999998854

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.67  E-value=1e-15  Score=125.45  Aligned_cols=193  Identities=13%  Similarity=0.130  Sum_probs=129.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEec-CCccccccCCCCCchhhhhh-cCCcEEEEecCCCh----HHHHhhhccC---
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~~~---   71 (287)
                      |||+|+||+++++.|+++|++|++++| +.....+..     ..+... ..++.++.+|++|.    +++.++++..   
T Consensus        17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV-----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-----HHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            899999999999999999999999999 544321110     111111 34688999999999    8888777532   


Q ss_pred             --CccEEEEccCCCc--------------------c-----------chHHHHHh----CC-CC------CcEEEEeeee
Q 023078           72 --GFDVVYDINGREA--------------------D-----------EVEPILDA----LP-NL------EQFIYCSSAG  107 (287)
Q Consensus        72 --~~d~vi~~a~~~~--------------------~-----------~~~~l~~a----~~-~~------~~~i~~Ss~~  107 (287)
                        ++|++||+||...                    +           +..+++++    +. +.      .++|++||..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A           92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence              6899999998631                    1           11123333    32 33      7999999987


Q ss_pred             EeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCccc
Q 023078          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       108 ~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      .+..           ..+...| .+|...+.+.+       ..+++++.++||.+.++ .  .+.......+....+.  
T Consensus       172 ~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~p~--  235 (276)
T 1mxh_A          172 TDLP-----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKVPL--  235 (276)
T ss_dssp             GGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTCTT--
T ss_pred             hcCC-----------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcCCC--
Confidence            6421           1123346 99999887753       34899999999999998 2  1222233333332211  


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       180 ~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                            .+++.+++|+|++++.++....  ..|+.+++.++..
T Consensus       236 ------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 ------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             ------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence                  1227889999999999987533  2688999988753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.67  E-value=2.5e-16  Score=128.87  Aligned_cols=195  Identities=17%  Similarity=0.187  Sum_probs=122.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.++.....+.+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV----VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            899999999999999999999988754433322111    1122222457889999999998888877643     7899


Q ss_pred             EEEccCCCcc---------------------chHHHHHh----CC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD---------------------EVEPILDA----LP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a----~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +||+||....                     +...++++    +.     +..++|++||...+....          ..
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~  177 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA----------TQ  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT----------TT
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC----------CC
Confidence            9999986321                     12223222    22     346899999977542211          11


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      ...| .+|...+.+.+       ..+++++.++||.+.++..................         ....+.+++|+|+
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~edvA~  248 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---------PMQRAGMPEEVAD  248 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CC---------TTSSCBCHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcC---------CcCCCcCHHHHHH
Confidence            2336 99999887653       34899999999999888432211111111111111         1223567999999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +++.++....  ..|+.|++.+|
T Consensus       249 ~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          249 AILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCCccccccCCEEeecCC
Confidence            9999987543  36889999876

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.67  E-value=7.8e-17  Score=133.44  Aligned_cols=208  Identities=17%  Similarity=0.128  Sum_probs=136.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcC---CcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+.....   ++.++.+|++|.+++.++++..     +
T Consensus        32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999865522111     11111122   6888999999998888877632     6


Q ss_pred             ccEEEEccCCCcc----------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~~----------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|++||+||....                      +..+++++    +. ...++|++||...+...          ..+
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~  176 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA----------HSG  176 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------CTT
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC----------CCC
Confidence            8999999986321                      11233333    22 22799999998654221          012


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc--hh------HHHHHHHHcCCCcccCCCCCceeee
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ...| .+|...+.+.+       ..+++++.++||.+.++.....  ..      ......+...  .       ....+
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~  247 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC--I-------PVGHC  247 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C-------TTSSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc--C-------CCCCC
Confidence            2346 99999887753       3689999999999988731100  00      0011111110  1       11247


Q ss_pred             eeHHHHHHHHHHHhcCC---cCCCceEEeeCCCcccHHHHHHHHHH
Q 023078          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~i~~~i~~  232 (287)
                      .+++|+|++++.++...   ...|+.+++.+|..+.+.+.+..+.+
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence            88999999999998654   34688999998876665554444443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.67  E-value=2.8e-16  Score=127.44  Aligned_cols=196  Identities=18%  Similarity=0.224  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++++.........    .........++.++.+|++|.+++.++++..     ++|+
T Consensus        19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW----LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            899999999999999999999999884433211111    1122223457889999999998888877643     7899


Q ss_pred             EEEccCCCcc--------------------chHHHH----HhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~----~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.    ..++  +..++|++||...+..           ..+...|
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  163 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTNY  163 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-----------CSCCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-----------CCCCccc
Confidence            9999986321                    222233    3333  6679999999765321           1223346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+..+.... ..+.....+....+.         ..+.+++|+|+++..
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             99998887653       358999999999997763111 112233333332221         235679999999999


Q ss_pred             HhcCC--cCCCceEEeeCCCcc
Q 023078          202 VLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      ++...  ...|+.+++.+|..+
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            88653  236899999887643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.67  E-value=4.8e-16  Score=126.82  Aligned_cols=193  Identities=16%  Similarity=0.154  Sum_probs=131.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++.++........    ...+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET----LNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            899999999999999999999988776543321111    1122223467899999999999888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC------C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~------~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +..++++++      + +..++|++||...+...           .+...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  176 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN-----------RGQVN  176 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------CCCch
Confidence            9999986321                    233444443      2 56799999997754221           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.+.++.....  ...........+.         ..+.+++|+|+++.
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~  245 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLAS  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            6 89998776652       3589999999999988853221  2233333333222         23567999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+++.+|.
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          246 YLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCCcccCccCCEEEeCCCc
Confidence            9987532  368899998763

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.67  E-value=4.8e-16  Score=126.65  Aligned_cols=190  Identities=17%  Similarity=0.234  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+.        ..+...++.++.+|++|.+++.++++..     ++|+
T Consensus        33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI--------AADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986653221        1122457889999999999888877632     7999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +    ++.++..++  +..++|++||...+...           .+...|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y  173 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----------PGQTNY  173 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------CCchhH
Confidence            9999997421                    2    222333333  66799999998754221           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+.++.... ........+....++         ..+.+++|+|++++.
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~edvA~~v~~  243 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89998887653       358999999999998763111 112222333333222         245678999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  -.|+.+++.+|.
T Consensus       244 L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCccccCccCCEEEECCCe
Confidence            987543  368999998875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.67  E-value=4.2e-16  Score=127.67  Aligned_cols=194  Identities=14%  Similarity=0.106  Sum_probs=131.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA--------TKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999866532111        112357889999999998888777643     7899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.++    +.  +..++|++||...+..           ..+...|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  175 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----------VGGTGAY  175 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCchhH
Confidence            9999997321                    22233333    22  5678999999765321           1223346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCC--Cccc-CCC---CCceeeeeeHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR--PIPI-PGS---GIQVTQLGHVKDL  195 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~--~~~~-~~~---~~~~~~~i~~~Dv  195 (287)
                       .+|...+.+.+       ..+++++.++||.+.++.     ..    ......  .... ...   ......+.+++|+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  246 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM-----QQ----TAMAMFDGALGAGGARSMIARLQGRMAAPEEM  246 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HH----HHHTCC------CCHHHHHHHHHSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch-----HH----HhhhcchhhHHHHhhhhhhhccccCCCCHHHH
Confidence             99999887753       368999999999998872     11    111100  0000 000   0011246789999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      |++++.++....  ..|+.+++.+|...+
T Consensus       247 A~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          247 AGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            999999987543  368999999886543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.67  E-value=4.2e-16  Score=125.64  Aligned_cols=183  Identities=19%  Similarity=0.257  Sum_probs=123.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+.                ..+..+.+|++|.+++.++++..     .+|+
T Consensus        21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999986542                11223789999998888777632     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..+++++    ++  +..++|++||...+...           .+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQANY  153 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------CCChhH
Confidence            9999986421                    12233333    22  56899999998653211           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+.++... .+............+         ...+.+++|+|++++.
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQFIP---------AKRVGTPAEVAGVVSF  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGGGCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-hcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             89998887653       35899999999998765210 001111111111111         1247899999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  ..|+.+++.++..
T Consensus       224 l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          224 LASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HcCccccCCcCCEEEECCCcc
Confidence            987532  3688999988754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.67  E-value=1.2e-16  Score=133.68  Aligned_cols=222  Identities=16%  Similarity=0.121  Sum_probs=132.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..... +.+. ...........++.++.+|++|.+++.++++..     ++|
T Consensus        11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~-~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD   89 (324)
T 3u9l_A           11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVE-AIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRID   89 (324)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHH-HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHH-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999742211 0000 000111222457899999999999888887643     799


Q ss_pred             EEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||...                    .++.++++++    +  +..++|++||...+...          ......
T Consensus        90 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~----------~~~~~~  159 (324)
T 3u9l_A           90 VLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT----------PPYLAP  159 (324)
T ss_dssp             EEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------CSSCHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----------CCcchh
Confidence            9999999632                    2344455554    3  67899999998754211          011234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC---C--chhHHHHHHHHcCCCcccCCCCCc--------ee
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---N--PVEEWFFHRLKAGRPIPIPGSGIQ--------VT  187 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~--------~~  187 (287)
                      | .+|...|.+.+       ..|+++++++||.+.++...   .  ................   +.++.        ..
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~  236 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNA---GLGEEIKKAFAAIVP  236 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTT---THHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhcccccc---CCHHHHHHHHHHhcC
Confidence            6 99999987763       35899999999999865321   0  0000111111111000   00000        01


Q ss_pred             eeeeHHHHHHHHHHHhcCCcC-CCceEEeeCCCccc-------HHHHHHHHHHHhCCC
Q 023078          188 QLGHVKDLARAFVQVLGNEKA-SRQVFNISGEKYVT-------FDGLARACAKAAGFP  237 (287)
Q Consensus       188 ~~i~~~Dva~~~~~~~~~~~~-~~~~~~~~~~~~~s-------~~~i~~~i~~~~g~~  237 (287)
                      +..+++|+|++++.+++.+.. ....+.++ +....       ..++.+.+.+.+|..
T Consensus       237 ~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g-p~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          237 PDADVSLVADAIVRVVGTASGKRPFRVHVD-PAEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             TTCCTHHHHHHHHHHHTSCTTCCCSEEEEC-TTCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             CCCCHHHHHHHHHHHhcCCCCCCCeEEEeC-CcchHHHHHHHHHHHHHHHHHHHcChH
Confidence            125789999999999987642 23345554 33334       334444455566654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.67  E-value=1.2e-16  Score=129.93  Aligned_cols=198  Identities=17%  Similarity=0.111  Sum_probs=124.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA--------GEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532211        122457889999999998888877643     7899


Q ss_pred             EEEccCCCcc---------------------chHHHHHhC----C------CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD---------------------EVEPILDAL----P------NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a~----~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +||+||....                     +..++.+++    +      ...++|++||...+..           ..
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-----------RP  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----------CT
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----------CC
Confidence            9999986421                     122233332    1      1446999999764311           11


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|...+.+.+       ..+++++.++||.+.++......     ..... ..............+++++|+|
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM-----GEDSE-EIRKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc-----ccCcH-HHHHHHhhcCCcCCCcCHHHHH
Confidence            22346 99999887753       35899999999999887421110     00000 0000011112223578999999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCcccH
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~s~  223 (287)
                      +++..++....  ..|+.+++.+|..++-
T Consensus       230 ~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          230 EAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            99999986533  3789999999876654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.67  E-value=3e-17  Score=133.24  Aligned_cols=196  Identities=14%  Similarity=0.080  Sum_probs=122.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..               ..   +.+|+++.+++.++++..  ++|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~---~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------AD---LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------CC---TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------cc---cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            799999999999999999999999999865521               11   568999999998888743  6799999


Q ss_pred             ccCCCc-c------------chHHHHHhC-----C-CCCcEEEEeeeeEeecCCCCCCCCC-----------------CC
Q 023078           79 INGREA-D------------EVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT  122 (287)
Q Consensus        79 ~a~~~~-~------------~~~~l~~a~-----~-~~~~~i~~Ss~~~y~~~~~~~~~e~-----------------~~  122 (287)
                      +||... .            +..++++++     + +..++|++||...+......+..+.                 ..
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            999754 1            233344443     2 5689999999887632110000000                 11


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..+...| .+|...+.+.+       ..++++++++||.+.++.................  +     ......+.+++|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--F-----VPPMGRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------C-----CCSTTSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--c-----ccccCCCCCHHH
Confidence            1123346 89999888763       3589999999999988742111000000010000  0     001124688999


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      +|++++.++..+  ...|+.+++.++...
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999998764  336889999887543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.67  E-value=4.6e-16  Score=126.50  Aligned_cols=199  Identities=13%  Similarity=0.082  Sum_probs=132.0

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+.+. .+.+     .++.....++.++.+|++|.+++.++++..     ++
T Consensus        14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1111     111111134788999999999888877642     68


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        ++.++++++.    ...++|++||...+..           ..+
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  156 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----------CCC
Confidence            999999986421                        2334555543    1358999999765321           112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..+++++.++||.++++..... ........+....+.         ..+.+++|+|
T Consensus       157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva  227 (261)
T 2wyu_A          157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVG  227 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2346 89999887763       3489999999999998843211 112222222222221         1356799999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCcccHHH
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~  225 (287)
                      ++++.++....  ..|+.+++.++..++..+
T Consensus       228 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          228 NLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            99999986532  368899999886655433

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.67  E-value=5.1e-16  Score=124.17  Aligned_cols=166  Identities=17%  Similarity=0.103  Sum_probs=111.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+.         .....++.++.+|++|.+++.++++..     ++|+
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A           11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL---------AAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211         111136888999999998888777532     7899


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +.    +.+++.++  +..++|++||...+..           ..+...|
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  150 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------FKGGAAY  150 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------CCCCchh
Confidence            9999986321                    11    23444443  6789999999865421           1223346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++++|||.+..+...         .. . ..          ..+++++|+|++++.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---------~~-~-~~----------~~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG---------NT-P-GQ----------AWKLKPEDVAQAVLF  209 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc---------cc-c-cc----------cCCCCHHHHHHHHHH
Confidence             89998877652       36899999999988765211         00 0 00          115789999999999


Q ss_pred             HhcCCc
Q 023078          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       210 l~~~~~  215 (234)
T 2ehd_A          210 ALEMPG  215 (234)
T ss_dssp             HHHSCC
T ss_pred             HhCCCc
Confidence            987643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.67  E-value=3e-16  Score=128.35  Aligned_cols=194  Identities=19%  Similarity=0.201  Sum_probs=130.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+.    ..+.....++.++.+|+++.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK----NELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            8999999999999999999999999997654322211    122223457899999999998888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.++    ++  +..++|++||...+..           ..+...|
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  179 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----------NMGQTNY  179 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------CCCchHh
Confidence            9999997321                    12223333    33  5679999999775422           1123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+..+....     +.......     .........+.+++|+|+++..
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~-----~~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKAD-----YVKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGGGCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHHH-----HHhcCCcCCCcCHHHHHHHHHH
Confidence             99999887753       368999999999997773211     11111110     0111122357889999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|+.+++.+|.
T Consensus       250 l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCcCCEEEeCCCe
Confidence            987543  378999998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.67  E-value=4.9e-16  Score=126.70  Aligned_cols=194  Identities=18%  Similarity=0.221  Sum_probs=129.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+ .....++.++.+|+++.+++.++++..     ++|
T Consensus        27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (267)
T 1vl8_A           27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-----QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD  101 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865422111     111 112356788999999998888777632     699


Q ss_pred             EEEEccCCCcc--------------------chHHH----HHhCC--CCCcEEEEeeee-EeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l----~~a~~--~~~~~i~~Ss~~-~y~~~~~~~~~e~~~~~p~~  127 (287)
                      ++||+||....                    +..++    +..++  +..++|++||.. .+.           ...+..
T Consensus       102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  170 (267)
T 1vl8_A          102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TMPNIS  170 (267)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CSSSCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CCCCCh
Confidence            99999986321                    12223    33333  568999999976 211           111233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .| .+|...+.+.+       ..++++++++||.+..+...... .......+....+.         ..+.+++|+|++
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~~  241 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL---------GRTGVPEDLKGV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT---------SSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC---------CCCcCHHHHHHH
Confidence            46 99999888763       35899999999999877421100 01112222222111         136789999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++....  ..|+.+.+.+|.
T Consensus       242 v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          242 AVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHcCccccCCcCCeEEECCCC
Confidence            999987532  368889988774

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.66  E-value=6e-17  Score=132.37  Aligned_cols=196  Identities=15%  Similarity=0.172  Sum_probs=133.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     .++.....++.++.+|++|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-----QEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            899999999999999999999999999876532211     122223457889999999999888887642     6999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.++    ++  +..++|++||...+..           ..+...|
T Consensus       107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~Y  175 (271)
T 4ibo_A          107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-----------RATVAPY  175 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTTCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-----------CCCchhH
Confidence            9999996321                    22333333    22  5579999999764311           1123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..++++..++||.+..+...... .+.+...+....+.         ..+.+++|+|++++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~  246 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAV  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             99999887753       36899999999999887321100 01122222222221         23567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCcc
Q 023078          201 QVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      .++....  ..|+.+++.+|...
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          247 FLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCccccCCCCcEEEECCCeec
Confidence            9887533  36899999988654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.66  E-value=7.4e-17  Score=133.85  Aligned_cols=186  Identities=15%  Similarity=0.104  Sum_probs=120.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAV-----NGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999999876532211     122222457899999999999888877642     7999


Q ss_pred             EEEccCCCc--------------------cchHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...                    .+..++++++    .  + ..++|++||...+..           ..+...
T Consensus       112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  180 (301)
T 3tjr_A          112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----------NAGLGT  180 (301)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------CCCchH
Confidence            999999632                    1233344442    2  3 568999999875421           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHH-----HHcCCCcccCCCCCceeeeeeHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      | .+|...+.+.+       ..|++++.++||.+..+.     .......     .....+...++.......+++++|+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL-----VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH-----HHHHHHHC----------------------CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc-----ccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence            6 99998887653       358999999999987762     1111000     0001111112222334568999999


Q ss_pred             HHHHHHHhcCCc
Q 023078          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.+++.+.
T Consensus       256 A~~i~~~l~~~~  267 (301)
T 3tjr_A          256 ARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCC
Confidence            999999998753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.66  E-value=2.8e-16  Score=128.07  Aligned_cols=193  Identities=16%  Similarity=0.176  Sum_probs=129.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA--------KKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876532111        111357889999999999888887632     7999


Q ss_pred             EEEccCCCcc--------------------------chHHHHHhC----C--------CCCcEEEEeeeeEeecCCCCCC
Q 023078           76 VYDINGREAD--------------------------EVEPILDAL----P--------NLEQFIYCSSAGVYLKSDLLPH  117 (287)
Q Consensus        76 vi~~a~~~~~--------------------------~~~~l~~a~----~--------~~~~~i~~Ss~~~y~~~~~~~~  117 (287)
                      +||++|....                          +..++++++    +        +..++|++||...+...     
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  164 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  164 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence            9999986311                          122333332    1        34689999998765321     


Q ss_pred             CCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       118 ~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                            .+...| .+|...+.+.+       ..++++++++||.+.++.... ........+....+  .      ...+
T Consensus       165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~--~------~~~~  229 (265)
T 2o23_A          165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP--F------PSRL  229 (265)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS--S------SCSC
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcCC--C------cCCC
Confidence                  123346 89998887653       358999999999998874211 10001111111111  0      0246


Q ss_pred             eeHHHHHHHHHHHhcCCcCCCceEEeeCCCcc
Q 023078          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~  221 (287)
                      ++++|+|++++.++......|+.+++.++..+
T Consensus       230 ~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          230 GDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            78999999999999876667889999887543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.66  E-value=4.2e-16  Score=126.45  Aligned_cols=191  Identities=17%  Similarity=0.181  Sum_probs=130.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+.+           ..++.++.+|++|.+++.++++..    ++|++
T Consensus        15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A           15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-----------GDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-----------CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-----------CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999665533322           357899999999998888777532    79999


Q ss_pred             EEccCCCc------------------------cchHHHHHhC----C----------CCCcEEEEeeeeEeecCCCCCCC
Q 023078           77 YDINGREA------------------------DEVEPILDAL----P----------NLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        77 i~~a~~~~------------------------~~~~~l~~a~----~----------~~~~~i~~Ss~~~y~~~~~~~~~  118 (287)
                      ||+||...                        .+...+.+++    .          +..++|++||...+...      
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  157 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ------  157 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC------
Confidence            99998531                        1122233332    1          23479999998764211      


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                           .+...| .+|...+.+.+       ..++++..++||.+..+.... .............+.        ...+.
T Consensus       158 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~r~~  223 (257)
T 3tl3_A          158 -----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--------PSRLG  223 (257)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--------SCSCB
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--------CCCcc
Confidence                 112346 89998887653       358999999999998874321 122222222222211        02467


Q ss_pred             eHHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +++|+|++++.++..+...|+.+++.+|..++
T Consensus       224 ~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          224 NPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             CHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            89999999999998766689999999886544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.66  E-value=1.4e-16  Score=132.46  Aligned_cols=196  Identities=12%  Similarity=0.182  Sum_probs=129.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-----hcCCcEEEEecCCChHHHHhhhccC----
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~----   71 (287)
                      |||+|+||+++++.|+++|++|++++|+........     .++..     ...++.++.+|++|.+++.++++..    
T Consensus        24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999865422110     01111     1357889999999999888887632    


Q ss_pred             -CccEEEEccCCCc--------------------cchHHHHHhCC------CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           72 -GFDVVYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        72 -~~d~vi~~a~~~~--------------------~~~~~l~~a~~------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                       ++|+|||+||...                    .++.++++++.      +..++|++||.. +..           ..
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~-----------~~  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAG-----------FP  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTC-----------CT
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccC-----------CC
Confidence             5999999998521                    12344444421      457899999876 211           11


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh---HHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      ....| .+|...+.+.+       ..+++++++|||.++++.......   ..+...+...         .....+.+++
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~  237 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---------IPAKRIGVPE  237 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---------STTSSCBCTH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---------CcccCCCCHH
Confidence            12345 88888776653       348999999999999983111110   0011010000         0112478899


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      |+|++++.++....  ..|+.+++.+|...+
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999986533  368899999886543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.66  E-value=1.9e-16  Score=129.98  Aligned_cols=194  Identities=16%  Similarity=0.200  Sum_probs=131.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-----DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999999876532211     122222457889999999999888877642     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC------C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL------P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~------~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||+||....                    ++.++.+++      +  +..++|++||...+..           ..+..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~  173 (279)
T 3sju_A          105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG-----------VMYAA  173 (279)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC-----------CCCCh
Confidence            9999987321                    223333332      2  5679999999875321           11223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc----------hhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      .| .+|...+.+.+       ..++++..++||.+.++.....          ........+....+         ...+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~  244 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP---------LGRY  244 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT---------TSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC---------CCCC
Confidence            46 99998887653       3689999999999977621000          01112222222211         2246


Q ss_pred             eeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .+++|+|++++.++....  ..|+.+++.+|.
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            789999999999887643  478999998875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.66  E-value=5.2e-16  Score=127.45  Aligned_cols=195  Identities=13%  Similarity=0.115  Sum_probs=132.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.......     .........++.++.+|++|.+++.++++.     -.+|+
T Consensus        40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-----EHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHH-----HHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542111     011112235788999999999988888763     14999


Q ss_pred             EEEccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |||++|....                      +    ++.+++.++  +..++|++||...+..         ....+..
T Consensus       115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~~~~~  185 (279)
T 3ctm_A          115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIPQLQA  185 (279)
T ss_dssp             EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred             EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCCCCcc
Confidence            9999985321                      1    344555554  6789999999764311         0012334


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...|.+.+       ..+ +++.++||.+.++.... ........+....+         ...+++++|+|+++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~  254 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWWQLTP---------LGREGLTQELVGGY  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHHHHST---------TCSCBCGGGTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHHHhCC---------ccCCcCHHHHHHHH
Confidence            46 89999998764       246 89999999998874321 11122222221111         12478899999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCCc
Q 023078          200 VQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      ..++...  ...|+.+++.+|..
T Consensus       255 ~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          255 LYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCccCCEEEECCCee
Confidence            9998753  23688999988753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.66  E-value=1.4e-15  Score=122.51  Aligned_cols=188  Identities=18%  Similarity=0.187  Sum_probs=128.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+...          ..++.++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A           11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221110          114788999999999888877632     5899


Q ss_pred             EEEccCCCcc--------------------chHHH----HHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l----~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++    +..++  +..++|++||...++.            .....|
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~~~Y  148 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------LGQANY  148 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC------------CCchhH
Confidence            9999986321                    12223    33333  5679999999872211            112346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+.... +............+.         ..+.+++|+|++++.
T Consensus       149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~  218 (245)
T 1uls_A          149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRAGKPLEVAYAALF  218 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCCcCHHHHHHHHHH
Confidence             88988876653       358999999999998874321 111222222222111         136789999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  ..|+.+++.++..
T Consensus       219 l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          219 LLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCchhcCCcCCEEEECCCcc
Confidence            987532  3688999988754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.66  E-value=2.1e-16  Score=128.26  Aligned_cols=195  Identities=16%  Similarity=0.167  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc--ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+...  ..+..     ..+.....++.++.+|++|.+++.++++..     ++
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-----KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998654  21110     111112356889999999998888777532     69


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHh----CC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD--------------------EVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      |++||+||....                    +..+++++    ++  +. .++|++||...+..           ..+.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  151 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-----------FPIL  151 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----------CTTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----------CCCc
Confidence            999999986321                    12223333    32  55 79999999865321           1123


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-----------HHHHHHHHcCCCcccCCCCCcee
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVT  187 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  187 (287)
                      ..| .+|...+.+.+       ..+++++.++||.+..+.... ..           ......+....         ...
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~~  221 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ-IDAELSKINGKPIGENFKEYSSSI---------ALG  221 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH-HHHHHHHHHCCCTTHHHHHHHTTC---------TTS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh-hhhhhccccCCchHHHHHHHHhcC---------CCC
Confidence            346 89999887653       358999999999987652100 00           00011111111         112


Q ss_pred             eeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          188 QLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       188 ~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      .+.+++|+|++++.++....  ..|+.+++.+|..+
T Consensus       222 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          222 RPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             CccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            36889999999999987542  36889999887543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.66  E-value=1.7e-16  Score=128.58  Aligned_cols=196  Identities=20%  Similarity=0.187  Sum_probs=133.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.+...+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR--------EEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999866532111        111357889999999998887776532     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +...+.+++.    ...++|++||...+...           .+...| .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  154 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----------PGMSVYSA  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----------TTBHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CCchHHHH
Confidence            9999987421                    2333444432    33589999998754221           123346 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCC-ch----hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      +|...+.+.+       ..++++..++||.+..+.... ..    ...+........+.         ..+.+++|+|++
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~  225 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGTADEVARA  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            9999887753       358999999999999885321 11    11122222221111         235689999999


Q ss_pred             HHHHhcC-CcCCCceEEeeCCCcccHH
Q 023078          199 FVQVLGN-EKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       199 ~~~~~~~-~~~~~~~~~~~~~~~~s~~  224 (287)
                      ++.++.. ....|+.+++.+|...++.
T Consensus       226 v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          226 VLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             HHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             HHHHcCcCcCccCCEEEECCCccccCc
Confidence            9988865 2237899999998765543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.65  E-value=7.9e-16  Score=124.11  Aligned_cols=190  Identities=16%  Similarity=0.194  Sum_probs=131.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..        .....+...+.+|++|++++.++++..     ++|+
T Consensus        15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS--------DYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532111        111245678999999999888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.+++    +  +..++|++||...+...           .+...|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  155 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQANY  155 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence            9999996321                    233334432    2  56799999997654221           123346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..++++..++||.+..+.... .............+         ...+.+++|+|+++..
T Consensus       156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~  225 (248)
T 3op4_A          156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-LNDEQRTATLAQVP---------AGRLGDPREIASAVAF  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             99998887653       358999999999998874321 11222222222221         1246789999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  ..|+.+++.+|.
T Consensus       226 L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          226 LASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HcCCccCCccCcEEEECCCe
Confidence            887543  368999998875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.65  E-value=5.4e-16  Score=126.35  Aligned_cols=177  Identities=16%  Similarity=0.134  Sum_probs=122.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+........           ..++.++.+|++|.+++.++++..     ++|+
T Consensus        22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876633222           247888999999998888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHH----hCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~----a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.+    .++  +..++|++||...+..           ..+...|
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  159 (266)
T 3p19_A           91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----------FPDHAAY  159 (266)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----------CCCCchH
Confidence            9999997321                    2233333    333  6789999999875421           1122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+.++................. ..+       ...+++++|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~  231 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLF  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHH
Confidence             99999887653       3689999999999988742111111111111110 001       1246789999999999


Q ss_pred             HhcCCc
Q 023078          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       232 l~~~~~  237 (266)
T 3p19_A          232 AYQQPQ  237 (266)
T ss_dssp             HHHSCT
T ss_pred             HHcCCC
Confidence            998765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.65  E-value=3.8e-16  Score=127.70  Aligned_cols=195  Identities=14%  Similarity=0.122  Sum_probs=131.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|+||+++++.|+++|++|++++|++.. .+.     ..++.....++.++.+|++|.+++.++.+.    -++|++
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l  110 (273)
T 3uf0_A           37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEV-----ADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL  110 (273)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHH-----HHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence            7999999999999999999999999976432 111     111222245688999999999887776432    279999


Q ss_pred             EEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           77 YDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      ||+||....                    +..++++++    +  +..++|++||...+..           ..+...| 
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~  179 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-----------GRNVAAYA  179 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CSSCHHHH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-----------CCCChhHH
Confidence            999987321                    233344433    2  6679999999875421           1123346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      .+|...+.+.+       ..++++..++||.+.++...... .......+....+.         ..+.+++|+|++++.
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~  250 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWATPEDMVGPAVF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            99999887753       36899999999999887421100 11112222222211         246779999999999


Q ss_pred             HhcCC--cCCCceEEeeCCCcc
Q 023078          202 VLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      ++...  ...|+.+++.+|...
T Consensus       251 L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          251 LASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCchhcCCcCCEEEECcCccC
Confidence            98753  237899999988654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.65  E-value=4.7e-16  Score=125.67  Aligned_cols=175  Identities=10%  Similarity=0.099  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+.                 ....+.+|++|.+++.++++..     .+|+
T Consensus        28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987652                 1234678899998888877642     6899


Q ss_pred             EEEccCCCc---------------------cchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREA---------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||...                     .+..++++++.    ...++|++||...+..           ..+...| 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  159 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-----------TSGMIAYG  159 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-----------CCCCchhH
Confidence            999998521                     12333444432    3358999999875421           1223346 


Q ss_pred             cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|...+.+.+         ..+++++.++||.+..+.         .......         .....+++++|+|++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---------~~~~~~~---------~~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---------NRKYMSD---------ANFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---------HHHHCTT---------SCGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---------hhhhccc---------ccccccCCHHHHHHHHH
Confidence            99999888763         257999999999886651         1121111         12345788999999999


Q ss_pred             HHhcC---CcCCCceEEeeCCCcc
Q 023078          201 QVLGN---EKASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~---~~~~~~~~~~~~~~~~  221 (287)
                      .++..   ....|+.+++.+++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99987   3347889999876653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.65  E-value=9.9e-16  Score=123.62  Aligned_cols=183  Identities=14%  Similarity=0.198  Sum_probs=122.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC-ChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+..... .+            ..+.++ +|+. +.+.+.+.+.  ++|++||+
T Consensus        25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~------------~~~~~~-~D~~~~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           25 LAASRGIGRAVADVLSQEGAEVTICARNEELLK-RS------------GHRYVV-CDLRKDLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HT------------CSEEEE-CCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-hh------------CCeEEE-eeHHHHHHHHHHHhc--CCCEEEEC
Confidence            799999999999999999999999999863311 11            245666 9982 2333434443  79999999


Q ss_pred             cCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      ||....                    +    ++.+++.++  +..++|++||...+...           .+...| .+|
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK  157 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENLYTSNSAR  157 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCCchHHHHH
Confidence            986321                    1    223344444  67899999998765321           122346 889


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHH-HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      ...+.+.+       ..+++++.++||.+.++.... ....... .+....+         ...+.+++|+|++++.++.
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcC
Confidence            98887653       368999999999999884210 1111111 2222111         1247899999999999887


Q ss_pred             CCc--CCCceEEeeCCCc
Q 023078          205 NEK--ASRQVFNISGEKY  220 (287)
Q Consensus       205 ~~~--~~~~~~~~~~~~~  220 (287)
                      ...  ..|+.+++.++..
T Consensus       228 ~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            532  3588999988753

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.65  E-value=3.1e-16  Score=127.87  Aligned_cols=196  Identities=15%  Similarity=0.167  Sum_probs=131.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     .++.+ ...++.++.+|++|.+++.++++..     ++|
T Consensus        26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  100 (266)
T 4egf_A           26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD  100 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999866532211     11111 2467899999999998887777532     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      ++||+||....                    +...+.+++    .  + ..++|++||...+..           ..+..
T Consensus       101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  169 (266)
T 4egf_A          101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----------LPDHY  169 (266)
T ss_dssp             EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----------CCCCh
Confidence            99999986421                    223333332    2  2 468999999875421           11223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .| .+|...+.+.+       ..++++..++||.+..+...... .......+....+.         ..+.+++|+|++
T Consensus       170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~  240 (266)
T 4egf_A          170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAVPHEVSDA  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            46 99998887653       35899999999999876210000 01112222222221         235679999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCcc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++.++....  ..|+.+++.+|..+
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          241 VVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCccCcEEEECCCccC
Confidence            999987532  36899999887643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.64  E-value=7.7e-16  Score=123.91  Aligned_cols=184  Identities=13%  Similarity=0.147  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC---CccEE
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~d~v   76 (287)
                      |||+|+||+++++.|++ .|+.|++.+|+....               ...+.++.+|++|.+++.++++..   ++|++
T Consensus        10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A           10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999 789999999876521               246788999999999888877533   79999


Q ss_pred             EEccCCCc--------------------cchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           77 YDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        77 i~~a~~~~--------------------~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      ||+||...                    .+...+++++.    ...++|++||...+..           ..+...| .+
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~as  143 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----------KPNSFAYTLS  143 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----------CTTBHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----------CCCCchhHHH
Confidence            99999732                    12444556554    2248999999875421           1122346 99


Q ss_pred             hHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHH-----------HHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       132 k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      |...+.+.+       ..+++++.++||.+.++.... ....           ........         .....+.+++
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~  213 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKE---------FPLNRIAQPQ  213 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTT---------STTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhc---------CCCCCCcCHH
Confidence            999887763       468999999999997762110 0000           11111111         1123467899


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      |+|++++.++....  ..|+.+++.+|..
T Consensus       214 dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          214 EIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhcCccccccCCeEeECCCcc
Confidence            99999999997543  3688999988753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.64  E-value=2.8e-15  Score=122.46  Aligned_cols=196  Identities=16%  Similarity=0.135  Sum_probs=130.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++++.....+.+    ...+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999888654422211    1122233467899999999999888887643     7899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +..++.++    ++...++|++||....          .....+...| .
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~a  169 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKHSLYSG  169 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCCchhHH
Confidence            9999997321                    22333333    3344589999996421          0111223446 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCC----------c-hhHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----------P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      +|...+.+.+       ..++++..++||.+..+....          . .............+         ...+.++
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p  240 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP---------LHRNGWP  240 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST---------TCSCBCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC---------CCCCCCH
Confidence            9999887753       358999999999998874110          0 01111112221111         1235679


Q ss_pred             HHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          193 KDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +|+|++++.++....  -.|+.+++.+|.
T Consensus       241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          241 QDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            999999999986532  368899998774

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.64  E-value=6.6e-16  Score=123.91  Aligned_cols=187  Identities=18%  Similarity=0.246  Sum_probs=125.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+           +.  ++.++.+|+++ +++.++++.     .++|+
T Consensus         8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ-----------SL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-----------HH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-----------hh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765111           11  37788999998 665555432     17999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||++|....                    +..++.++    ++  +..++|++||...+....         ..+...|
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y  144 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAY  144 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccH
Confidence            9999986321                    12223333    33  678999999987653211         1223346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                       .+|...+.+.+       ..+++++.++||.+.++...... .+.+...+....+         ...+.+++|+|++++
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAA  215 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             99999887653       35899999999999887321100 0112222222111         123678999999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  ..|+.+++.+|.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            9886532  368889988774

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.64  E-value=1.3e-15  Score=123.05  Aligned_cols=183  Identities=15%  Similarity=0.215  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+.                ..+.++.+|++|++++.++++..     .+|+
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976541                23778999999998888877631     5799


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..+++++    ++  +..++|++||...+..           ..+...|
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  159 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-----------SAGQANY  159 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-----------HHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCcHHH
Confidence            9999986321                    12233333    22  5679999999765311           0112246


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+.... +.......+....+         ...+++++|+|++++.
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVP---------LGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             89998887753       357999999999987763211 10001111111111         1247899999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++..+.  ..|+.+.+.++..
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCcCcEEEECCccc
Confidence            987643  3688999988754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.64  E-value=3.6e-16  Score=128.42  Aligned_cols=195  Identities=15%  Similarity=0.117  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcC---CcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+.....   ++.++.+|++|.+++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (280)
T 1xkq_A           12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   86 (280)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            899999999999999999999999999865422110     01111112   6888999999998888877632     6


Q ss_pred             ccEEEEccCCCcc------------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD------------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                      +|++||+||....                        +..++++++    .  + .++|++||...+...          
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------  155 (280)
T 1xkq_A           87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA----------  155 (280)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC----------
T ss_pred             CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC----------
Confidence            8999999986321                        122233332    2  4 799999998754221          


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc--hh------HHHHHHHHcCCCcccCCCCCce
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                      ..+...| .+|...+.+.+       ..+++++.++||.+.++.....  ..      ..+.......  .       ..
T Consensus       156 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~  226 (280)
T 1xkq_A          156 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC--I-------PI  226 (280)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C-------TT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC--C-------CC
Confidence            0123346 89999887753       3589999999999988731110  00      0011111111  1       11


Q ss_pred             eeeeeHHHHHHHHHHHhcCC---cCCCceEEeeCCCc
Q 023078          187 TQLGHVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (287)
Q Consensus       187 ~~~i~~~Dva~~~~~~~~~~---~~~~~~~~~~~~~~  220 (287)
                      ..+.+++|+|++++.++...   ...|+.+++.++..
T Consensus       227 ~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          227 GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            24789999999999988653   23688999988854

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.64  E-value=2.3e-16  Score=130.48  Aligned_cols=198  Identities=22%  Similarity=0.256  Sum_probs=130.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+++++.|+++|++|++++|+... ..+.+    .........++.++.+|++|.+++.++++..     ++|
T Consensus        55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV----KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHH----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987432 11111    0111222457889999999998887777532     799


Q ss_pred             EEEEccCCCc---------------------cchHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~~---------------------~~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      ++||+||...                     .+..++++++    +...++|++||...+...           .....|
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y  199 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS-----------PHLLDY  199 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----------TTCHHH
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----------CCchHH
Confidence            9999998632                     1233344443    234589999998765321           122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+.++......        .................+..++|+|++++.
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG--------QTQDKIPQFGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT--------SCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC--------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             99999887753       35899999999999886310000        000001111111222346789999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCcc
Q 023078          202 VLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++....  ..|+++++.+|..+
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            986543  36899999988654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.64  E-value=1.1e-15  Score=125.41  Aligned_cols=206  Identities=13%  Similarity=0.112  Sum_probs=131.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc---------ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA---------QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-   70 (287)
                      |||+|.||+++++.|+++|++|++++|+.....         +.+. ...........++.++.+|++|.+++.++++. 
T Consensus        17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   95 (277)
T 3tsc_A           17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLS-ETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDG   95 (277)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            799999999999999999999999998532100         0000 00011122245788999999999988888764 


Q ss_pred             ----CCccEEEEccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCC
Q 023078           71 ----KGFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCE  119 (287)
Q Consensus        71 ----~~~d~vi~~a~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e  119 (287)
                          -.+|++||+||....                    +..+++++    +.  + ..++|++||...+...       
T Consensus        96 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  168 (277)
T 3tsc_A           96 VAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ-------  168 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC-------
Confidence                269999999987321                    22333333    22  2 4689999998753211       


Q ss_pred             CCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc-ccCCCCCceeeee
Q 023078          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLG  190 (287)
Q Consensus       120 ~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i  190 (287)
                          .....| .+|...+.+.+       ..++++..++||.+..+.................... ........ .-+.
T Consensus       169 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~  243 (277)
T 3tsc_A          169 ----PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DWVA  243 (277)
T ss_dssp             ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS-CSCB
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC-CCCC
Confidence                122346 99999887763       3589999999999988742221111122222121111 11111111 2478


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +++|+|++++.++....  ..|+.+++.+|.
T Consensus       244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          244 EPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            99999999999997543  368899998875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.64  E-value=6.7e-16  Score=126.49  Aligned_cols=192  Identities=15%  Similarity=0.166  Sum_probs=127.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     .++.. ..++.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-----TRLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865422111     11111 126788899999998888777632     6999


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCC--CC----CcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~--~~----~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +||+||....                    ++.+    ++..++  +.    .++|++||...+....           .
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~-----------~  177 (276)
T 2b4q_A          109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG-----------E  177 (276)
T ss_dssp             EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-----------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-----------C
Confidence            9999985321                    1222    233232  33    7999999987643211           1


Q ss_pred             Cc-cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHc--CCCcccCCCCCceeeeeeHHH
Q 023078          126 KS-RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       126 ~~-~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .. .| .+|...+.+.+       ..+++++.++||.+..+.... ........+..  ..+         ...+.+++|
T Consensus       178 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p---------~~r~~~p~d  247 (276)
T 2b4q_A          178 QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIP---------MGRWGRPEE  247 (276)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTST---------TSSCCCHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCC---------CCCcCCHHH
Confidence            22 45 99999887763       358999999999998874211 11001111111  111         123678999


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +|++++.++....  ..|+.+++.+|.
T Consensus       248 vA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          248 MAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999987542  368899998774

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.64  E-value=1.3e-15  Score=124.18  Aligned_cols=196  Identities=14%  Similarity=0.105  Sum_probs=129.9

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+. ...+.+     .++.....+..++.+|++|++++.++++..     ++
T Consensus        15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHH-----HHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7999  9999999999999999999999986 211111     111111123578899999998888777632     68


Q ss_pred             cEEEEccCCCcc-------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |++||+||....                         ++.++++++.    ...++|++||...+...           .
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  157 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-----------P  157 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------T
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC-----------C
Confidence            999999986431                         1223444433    23589999997653211           1


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      +...| .+|...+.+.+       ..+++++.++||.++++..... ....+...+....++         ..+.+++|+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  228 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDV  228 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            22346 89999888763       2489999999999998853211 112222232222221         135789999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      |++++.++....  ..|+.+++.++..++
T Consensus       229 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          229 GNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999987533  268899999886543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.64  E-value=1.7e-15  Score=122.21  Aligned_cols=179  Identities=15%  Similarity=0.098  Sum_probs=118.5

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-------
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-------   71 (287)
                      |||+|+||+++++.|+++|  ++|++++|+..+... +..     .  ...++.++.+|+++.+++.++++..       
T Consensus         9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKS-----I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHT-----C--CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHh-----c--cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999  999999998665321 110     0  1357899999999999888887642       


Q ss_pred             CccEEEEccCCCc-c--------------------chHHHHHhCC------------C-----CCcEEEEeeeeEeecCC
Q 023078           72 GFDVVYDINGREA-D--------------------EVEPILDALP------------N-----LEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        72 ~~d~vi~~a~~~~-~--------------------~~~~l~~a~~------------~-----~~~~i~~Ss~~~y~~~~  113 (287)
                      ++|+|||+||... .                    +..++++++.            +     ..++|++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            7999999998643 1                    1233444432            1     67899999987643221


Q ss_pred             CCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCc
Q 023078          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                      .    ...+..+...| .+|...+.+.+       ..++++++++||.+.++....                        
T Consensus       161 ~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  212 (250)
T 1yo6_A          161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------
Confidence            1    11111234456 99999888763       248999999999987662100                        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc--CCCceEEee
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNIS  216 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~  216 (287)
                       ..+++.+|+|++++.++....  ..|..+.+.
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  244 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence             145789999999999998653  245555543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.64  E-value=7e-15  Score=120.94  Aligned_cols=196  Identities=17%  Similarity=0.113  Sum_probs=129.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+.+    ...+.....++.++.+|+++.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999865421111    0111222357888999999998887776532     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +..+++++    +++..++|++||...+...          ..+...| .
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~a  180 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKHAVYSG  180 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSCHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCCcchHH
Confidence            9999986421                    22333333    3456799999997643110          1123446 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCc---h-------hHHHHHHHHc--CCCcccCCCCCceeeeee
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---V-------EEWFFHRLKA--GRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~---~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~i~  191 (287)
                      +|...+.+.+       ..++++++++||.+.++.....   +       .......+..  ..+         ...+.+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  251 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---------LRRVGL  251 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---------TCSCBC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---------CCCCcC
Confidence            9999887763       3589999999999987621000   0       0111111111  111         123678


Q ss_pred             HHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++|+|++++.++....  ..|+.+++.+|.
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            9999999999987542  368899998774

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.64  E-value=4.9e-17  Score=136.24  Aligned_cols=213  Identities=16%  Similarity=0.126  Sum_probs=139.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCC-C----CCchhhhhhcCCcEEEEecCCChHHHHhhhccC----
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-G----ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----   71 (287)
                      |||+|.||+++++.|+++|++|++++|+......... .    ....++.....++.++.+|++|.+++.++++..    
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  112 (322)
T 3qlj_A           33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF  112 (322)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            8999999999999999999999999987210000000 0    001122222456788999999999888877642    


Q ss_pred             -CccEEEEccCCCcc--------------------chHHHHHhCC------------CCCcEEEEeeeeEeecCCCCCCC
Q 023078           72 -GFDVVYDINGREAD--------------------EVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        72 -~~d~vi~~a~~~~~--------------------~~~~l~~a~~------------~~~~~i~~Ss~~~y~~~~~~~~~  118 (287)
                       ++|++||+||....                    +..++++++.            ...++|++||...+...      
T Consensus       113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------  186 (322)
T 3qlj_A          113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------  186 (322)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC------
Confidence             79999999997421                    1223333321            02589999998754221      


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                           .....| .+|...+.+.+       ..++++..++|| +..+........ ..            ........++
T Consensus       187 -----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~~------------~~~~~~~~~~  247 (322)
T 3qlj_A          187 -----VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-MM------------ATQDQDFDAM  247 (322)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------------CCTT
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-hh------------hccccccCCC
Confidence                 122346 99999887763       368999999999 655422111100 00            0111223456


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCCcc-----------------cHHHHHHHHHHHhCCCC
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYV-----------------TFDGLARACAKAAGFPE  238 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~-----------------s~~~i~~~i~~~~g~~~  238 (287)
                      .++|+|++++.++....  ..|+.+++.+|...                 +..|+++.+.+.+|.+.
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~  314 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKAR  314 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence            79999999999986543  36889999988654                 67999999999998654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.63  E-value=1e-15  Score=125.37  Aligned_cols=195  Identities=17%  Similarity=0.167  Sum_probs=132.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+...+.     ..++.....++.++.+|++|.+++.++++..     ++|+
T Consensus        38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV-----ADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986653211     1122233457889999999999888887643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +..++++++    .  + ..++|++||...+...         ...+...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~~~~  183 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQVSH  183 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSCCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCCcch
Confidence            9999987421                    223333332    2  2 3689999997643111         1112344


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..++++..++||.+..+.... . ...........++         ..+..++|+|++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-~-~~~~~~~~~~~p~---------~r~~~pedvA~~v~  252 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP-L-ADYHALWEPKIPL---------GRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG-G-GGGHHHHGGGSTT---------SSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            6 99999887753       368999999999998874321 1 1122222222111         23567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCc
Q 023078          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .++....  ..|+.+++.+|..
T Consensus       253 fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHcCccccCccCcEEEECcCcc
Confidence            9987533  3688999988753

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.63  E-value=2.9e-16  Score=128.11  Aligned_cols=201  Identities=13%  Similarity=0.116  Sum_probs=132.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-CccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi   77 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     .++...  ...+..+.+|+++.+.+.++++.. ++|++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETI-----KEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            899999999999999999999999999876532211     111111  245678899999999888887754 699999


Q ss_pred             EccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        78 ~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      |+||....                    +    ++.++..++  +..++|++||...+..           ..+...| .
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  159 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP-----------SQEMAHYSA  159 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC-----------CTTCHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC-----------CCcchHHHH
Confidence            99986321                    1    222333332  5579999999875421           1223446 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCc----------ccCCCCCceeeeeeHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI----------PIPGSGIQVTQLGHVK  193 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~  193 (287)
                      +|...+.+.+       ..++++..++||.+..+.     ...+..........          .-.........+.+++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH
Confidence            9999887763       247899999999887652     11111110000000          0000001123578899


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      |+|++++.++....  -.|+.+++.+|...+
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            99999999987532  368999999886544

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.63  E-value=4.8e-15  Score=121.06  Aligned_cols=194  Identities=18%  Similarity=0.184  Sum_probs=130.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++++.....+.+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV----VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999987764322211    1122233467889999999999888877643     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +...++++    +++..++|++||.....          .+..+...| .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~~Y~a  182 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGISLYSA  182 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCchHHHH
Confidence            9999986321                    22233333    44557899999864310          011223346 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+.+       ..++++..++||.+.++......  ..........+.         ..+..++|+|++++.++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            9999887753       35899999999999887532110  011122222211         13567999999999988


Q ss_pred             cCC--cCCCceEEeeCCC
Q 023078          204 GNE--KASRQVFNISGEK  219 (287)
Q Consensus       204 ~~~--~~~~~~~~~~~~~  219 (287)
                      ...  ...|+.+++.+|.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            643  3368899998774

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.63  E-value=9.4e-16  Score=124.49  Aligned_cols=200  Identities=16%  Similarity=0.111  Sum_probs=125.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++++.....+..    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA----VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH----HHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999955443311111    1112222457889999999999888877643     7999


Q ss_pred             EEEccCCC-c--------------------cchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGRE-A--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||.. .                    .+..++.+++.    ...++|++||...+..          ...+...| 
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~  159 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------GGPGALAYA  159 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------CSTTCHHHH
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------CCCCcHHHH
Confidence            99999853 1                    12334444433    2348999999876411          01122346 


Q ss_pred             cchHHHHHHHH----h--cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 ~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      .+|...+.+.+    +  .++++..+.||.+..+.......+.....+         ........+.+++|+|+++..++
T Consensus       160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHc
Confidence            99999887763    2  238999999999877632111001111111         11122235678999999999998


Q ss_pred             cCCc--CCCceEEeeCCCcccH
Q 023078          204 GNEK--ASRQVFNISGEKYVTF  223 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~~~~s~  223 (287)
                      ....  ..|+.+++.++...+.
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC-
T ss_pred             CccccCccCCEEEECCCcCCCC
Confidence            7543  3789999988865443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.63  E-value=1.2e-15  Score=124.15  Aligned_cols=191  Identities=18%  Similarity=0.254  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+...+...        +...++.++.+|++|.+++.++++..     .+|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA--------ALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------TCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999998655321111        11246788999999999888877632     5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +..++.++    ++...++|++||...++.            .+...| .
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~Y~a  151 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA  151 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------------CCcHHHHH
Confidence            9999986321                    22233333    222468999999876410            112346 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+.+       ..++++++++||.+.++.... ........+....+.         ..+.+++|+|++++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            8988777653       358999999999998874221 112222222222211         13678999999999998


Q ss_pred             cCCc--CCCceEEeeCCCcc
Q 023078          204 GNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~~~~  221 (287)
                      ....  ..|+.+++.++..+
T Consensus       222 s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          222 SEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCcCCEEEECCCccc
Confidence            7542  36889999888643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.62  E-value=9.4e-16  Score=126.05  Aligned_cols=202  Identities=15%  Similarity=0.144  Sum_probs=132.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     .++.....++.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA-----DEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876532111     111222457889999999998888877643     7999


Q ss_pred             EEEccCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...                     .+...+++++    +  +..++|++||...+...         ...+...
T Consensus       109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~~~~~~  179 (283)
T 3v8b_A          109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TTPGATA  179 (283)
T ss_dssp             EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CSTTCHH
T ss_pred             EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CCCCchH
Confidence            999998631                     1233344443    3  66799999997643110         1112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCce--eeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+       ..++++..++||.+..+.........   ......+..........  ..+..++|+|++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH---EEETAIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC---HHHHSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc---chhhhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            6 99999887763       35799999999999887432111000   00000011111111111  245789999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++....  -.|+.+++.+|.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHcCccccCCcCCEEEECcCc
Confidence            999987543  368899998874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.62  E-value=1.1e-15  Score=124.99  Aligned_cols=201  Identities=14%  Similarity=0.118  Sum_probs=133.6

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+.... +.+     ..+.....++.++.+|++|.+++.++++..     .+
T Consensus        20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRI-----TEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHH-----HHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  9999999999999999999999984331 111     112222345889999999999888887643     78


Q ss_pred             cEEEEccCCCcc-------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |++||+||....                         +..++.+++.    ...++|++||...+..           ..
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  162 (271)
T 3ek2_A           94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-----------IP  162 (271)
T ss_dssp             EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-----------CC
Confidence            999999986421                         1233444432    2458999999765321           11


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      +...| .+|...+.+.+       ..+++++.++||.+..+...... ...+........+.         ..+..++|+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedv  233 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQV  233 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHH
Confidence            23346 89999887753       35899999999999887532211 12233333332222         235678999


Q ss_pred             HHHHHHHhcCC--cCCCceEEeeCCCcccHHHHH
Q 023078          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLA  227 (287)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~i~  227 (287)
                      |++++.++...  ...|+.+++.+|..++..+++
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            99999998753  347899999999877766554

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.62  E-value=2.4e-16  Score=129.25  Aligned_cols=197  Identities=12%  Similarity=0.176  Sum_probs=133.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     .++ .....++.++.+|++|.+++.++++..     ++|
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  107 (277)
T 4fc7_A           33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA-----RKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID  107 (277)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865532211     111 112457889999999998888877642     799


Q ss_pred             EEEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||...                    .+..++.++    +.  +..++|++||...+...           .....
T Consensus       108 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  176 (277)
T 4fc7_A          108 ILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ-----------ALQVH  176 (277)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC-----------TTCHH
T ss_pred             EEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----------CCcHH
Confidence            9999998532                    123334443    22  45799999998754221           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+       ..++++..++||.+.++......  ............++         ..+.+++|+|++
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~  247 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGNKTEIAHS  247 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            6 89998887653       35899999999999876210000  01122222222221         235689999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCccc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      ++.++....  ..|+.+++.+|..++
T Consensus       248 v~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          248 VLYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHcCCccCCcCCCEEEECCCcccC
Confidence            999987532  378999999886544

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.62  E-value=7.6e-16  Score=125.53  Aligned_cols=194  Identities=21%  Similarity=0.222  Sum_probs=125.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++.+++.....+.+.    ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVA----GKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHH----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998665443222111    122222457889999999999888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +..++++++    +...++|++||...+...           .....| .
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  177 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----------PSYGIYAA  177 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----------TTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----------CCchHHHH
Confidence            9999987321                    223333332    234589999997654221           122346 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+.+       ..++++..++||.+..+.............+....+         ...+..++|+|++++.++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP---------LERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHh
Confidence            9999888763       258999999999987764211111111122222211         224678999999999998


Q ss_pred             cCCc--CCCceEEeeCC
Q 023078          204 GNEK--ASRQVFNISGE  218 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~  218 (287)
                      ....  ..|+.+++.+|
T Consensus       249 s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             STTTTTCCSEEEEESSS
T ss_pred             CccccCccCCEEEeCCC
Confidence            7543  37889998876

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.62  E-value=5.3e-15  Score=123.56  Aligned_cols=206  Identities=12%  Similarity=0.113  Sum_probs=131.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCc-------hhhhhhcCCcEEEEecCCChHHHHhhhccC--
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--   71 (287)
                      |||+|.||+++++.|+++|++|++++|+.............       ........++.++.+|++|.+++.++++..  
T Consensus        52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  131 (317)
T 3oec_A           52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA  131 (317)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            89999999999999999999999999874321111110000       111223457889999999999888877643  


Q ss_pred             ---CccEEEEccCCCcc--------------------chHHHHHhC----C---CCCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           72 ---GFDVVYDINGREAD--------------------EVEPILDAL----P---NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        72 ---~~d~vi~~a~~~~~--------------------~~~~l~~a~----~---~~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                         ++|++||+||....                    +...+++++    .   ...++|++||...+...         
T Consensus       132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------  202 (317)
T 3oec_A          132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA---------  202 (317)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---------
Confidence               79999999986321                    233333332    2   24679999998754211         


Q ss_pred             CCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcC---CC----cc-cCCCCCc
Q 023078          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP----IP-IPGSGIQ  185 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~---~~----~~-~~~~~~~  185 (287)
                        .....| .+|...+.+.+       ..+++++.++||.+.++.....   .....+...   ..    .. +......
T Consensus       203 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          203 --PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHHHHhhhccC
Confidence              123346 99999887753       3589999999999988631100   011111100   00    00 0000111


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ...+.+++|+|++++.++....  ..|+.+++.+|..
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            1467899999999999886533  3689999988854

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.62  E-value=1.5e-15  Score=124.09  Aligned_cols=197  Identities=17%  Similarity=0.160  Sum_probs=129.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|++......         .....++.++.+|++|.+++.++++..     ++|+
T Consensus        15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL---------EQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211         111235788999999999888877632     6899


Q ss_pred             EEEccCCCcc---------------------chHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                     +..++++++    + +..++|++||...+...           .....|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----------AQAVPY  154 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----------CCCccc
Confidence            9999986321                     122233332    2 35799999997643111           112346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       .+|...+.+.+       ..+++++.++||.++++....     .-............++         ..+...+|+|
T Consensus       155 ~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva  225 (270)
T 1yde_A          155 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVG  225 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CCCcCHHHHH
Confidence             99999887753       368999999999998873100     0000001111111111         1356899999


Q ss_pred             HHHHHHhcCC-cCCCceEEeeCCCcccHHHH
Q 023078          197 RAFVQVLGNE-KASRQVFNISGEKYVTFDGL  226 (287)
Q Consensus       197 ~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~i  226 (287)
                      +++..++... ...|+.+++.+|..+.+...
T Consensus       226 ~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          226 AAAVFLASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             HHHHHHcccCCCcCCCEEEECCCeecccCcC
Confidence            9999888642 33688999999876654433

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.62  E-value=1.5e-14  Score=119.01  Aligned_cols=194  Identities=13%  Similarity=0.064  Sum_probs=128.9

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+     ..+.....++.++.+|++|.+++.++++..     ++
T Consensus        27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1111     111111134788999999998888877632     68


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |++||+||....                        ++.++++++.     ...++|++||...+...           .
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  169 (285)
T 2p91_A          101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV-----------P  169 (285)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC-----------T
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC-----------C
Confidence            999999986421                        1233444432     33699999997653211           1


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      +...| .+|...+.+.+       ..+++++.++||.+.++..... ....+...+....++         ..+.+++|+
T Consensus       170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  240 (285)
T 2p91_A          170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDV  240 (285)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            22346 89999887753       3589999999999999853221 112222222222221         135679999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      |++++.++....  ..|+.+++.++..
T Consensus       241 a~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          241 GDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            999999986532  2688899988753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.62  E-value=7.9e-16  Score=124.62  Aligned_cols=188  Identities=16%  Similarity=0.089  Sum_probs=124.6

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCCh-HHHHhhhccC-----
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSAK-----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~-~~~~~~~~~~-----   71 (287)
                      |||+|+||+++++.|+++|++ |++++|+....  .+     .++...  ..++.++.+|++|. +++.++++..     
T Consensus        11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~--~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A           11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPT--AL-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH--HH-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCcEEEEEecCchHH--HH-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            799999999999999999997 99999986421  00     111111  24678899999998 7777766532     


Q ss_pred             CccEEEEccCCCc------------cchHHHHHhC----C--C---CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           72 GFDVVYDINGREA------------DEVEPILDAL----P--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        72 ~~d~vi~~a~~~~------------~~~~~l~~a~----~--~---~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      ++|++||+||...            .+..++++++    .  +   ..++|++||...+...           .+...| 
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  152 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQVPVYS  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTSHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------CCchHHH
Confidence            7999999998632            2233444442    2  1   4679999998764221           123346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC--chh--HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .+|...+.+.+       ..+++++.++||.+.++....  ...  .........            ..++.+++|+|++
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~  220 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQN  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHH
Confidence            99999887763       268999999999998873100  000  000001110            1234589999999


Q ss_pred             HHHHhcCCcCCCceEEeeCCC
Q 023078          199 FVQVLGNEKASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~  219 (287)
                      ++.+++.. ..|+.|++.+|.
T Consensus       221 i~~~~~~~-~~G~~~~v~gG~  240 (254)
T 1sby_A          221 FVKAIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHC-CTTCEEEEETTE
T ss_pred             HHHHHHcC-CCCCEEEEeCCc
Confidence            99988743 368899998873

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.61  E-value=7.9e-16  Score=125.94  Aligned_cols=176  Identities=15%  Similarity=0.060  Sum_probs=120.7

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|++ +|++|++++|+.++..+..     ..+.....++.++.+|++|.+++.++++..     ++|
T Consensus        10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            89999999999999999 8999999999865422111     111122357889999999998888877643     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhCC----CCCcEEEEeeeeEeecC-C----------CCCCCC
Q 023078           75 VVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKS-D----------LLPHCE  119 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~-~----------~~~~~e  119 (287)
                      +|||+||....                    ++.++++++.    ...++|++||...+... .          ...++|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            99999986421                    2334555543    23489999998765320 0          001111


Q ss_pred             C-------------------CCCCCCccc-cchHHHHHHHH-------h----cCCcEEEEccCceecCCCCCchhHHHH
Q 023078          120 T-------------------DTVDPKSRH-KGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWFF  168 (287)
Q Consensus       120 ~-------------------~~~~p~~~~-~~k~~~E~~~~-------~----~~~~~~ilr~~~v~g~~~~~~~~~~~~  168 (287)
                      +                   ....|...| .+|...+.+.+       .    .+++++.++||.+.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            1                   112234557 99998887653       2    58999999999987763110       


Q ss_pred             HHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                                        ..+.+++|+|++++.++..+
T Consensus       238 ------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ------------------cccCChhHhhhhHhhhhcCc
Confidence                              13578999999999999754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.61  E-value=6.3e-16  Score=126.95  Aligned_cols=183  Identities=17%  Similarity=0.177  Sum_probs=119.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+...  ...+.++.+|++|.+++.++++..     ++
T Consensus        38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-----HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865422110     011111  135788999999999888777632     69


Q ss_pred             cEEEEccCCCcc--------------------c----hHHHHHhCC--CC--CcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD--------------------E----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~l~~a~~--~~--~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |+|||+||....                    +    ++.+++.++  +.  .++|++||...+..         .+..+
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~~~  183 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  183 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCCCC
Confidence            999999986321                    1    344555554  43  79999999875421         11122


Q ss_pred             Cccc-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ...| .+|...+.+.+         ..+++++.++||.+.++..     .    ............ ......+++++|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~-----~----~~~~~~~~~~~~-~~~~~~~~~~~dv  253 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA-----F----KLHDKDPEKAAA-TYEQMKCLKPEDV  253 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH-----H----HHTTTCHHHHHH-HHC---CBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh-----h----hhcccChhHHhh-hcccccCCCHHHH
Confidence            3346 89998877652         4579999999999977621     0    000000000000 0011246889999


Q ss_pred             HHHHHHHhcCCc
Q 023078          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.++..+.
T Consensus       254 A~~i~~l~~~~~  265 (279)
T 1xg5_A          254 AEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhcCCc
Confidence            999999998643

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.61  E-value=2e-14  Score=117.99  Aligned_cols=194  Identities=9%  Similarity=0.060  Sum_probs=131.6

Q ss_pred             CCcccc--hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+  ||+++++.|+++|++|++++|+...  +.     ...+.....++.++.+|+++.+++.++++..     .+
T Consensus        32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK--DR-----VEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH--HH-----HHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH--HH-----HHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            799977  9999999999999999999998711  00     1122222356889999999999888887642     68


Q ss_pred             cEEEEccCCCcc-------------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        74 d~vi~~a~~~~~-------------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      |++||+||....                         +..+++++    ++ ...++|++||...+..           .
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~  173 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-----------M  173 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-----------C
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-----------C
Confidence            999999986421                         12223333    22 4568999999875321           1


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .+...| .+|...+.+.+       ..++++..++||.+..+..... .............+.         ..+..++|
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~ped  244 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIME  244 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHH
Confidence            123346 89999887753       3689999999999988742211 112223332222221         23567899


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      +|++++.++....  ..|+.+++.+|..+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            9999999887532  47899999988653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.61  E-value=4.9e-16  Score=127.11  Aligned_cols=171  Identities=14%  Similarity=0.121  Sum_probs=119.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-----HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            799999999999999999999999999865422111     112222357889999999998888777532     6899


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      |||+||....                    +.    +.++..++  +..++|++||...+...           .+...|
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  180 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------PFLLAY  180 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------HHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CCchhH
Confidence            9999986321                    12    22333332  67899999998765321           122346


Q ss_pred             -cchHHHHHHHH----------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       130 -~~k~~~E~~~~----------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                       .+|...+.+.+          ..++++++++||.+.++....             . .      .....+++++|+|++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-------------~-~------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------P-S------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------T-H------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-------------c-c------ccccCCCCHHHHHHH
Confidence             89998887653          237999999999988874211             0 0      012356889999999


Q ss_pred             HHHHhcCCc
Q 023078          199 FVQVLGNEK  207 (287)
Q Consensus       199 ~~~~~~~~~  207 (287)
                      ++.++..+.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.60  E-value=3e-15  Score=121.77  Aligned_cols=173  Identities=17%  Similarity=0.111  Sum_probs=116.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|+++.+++.++++..     .+|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-----REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999876532211     122222457889999999999888877642     6999


Q ss_pred             EEEccCCC-c--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||.. .                    .+..+++++    ++  +..++|++||...+..           ..+...
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  178 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----------VADGAA  178 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----------CTTCHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----------CCCCch
Confidence            99999872 1                    122333333    22  5679999999875421           122334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.++||.+..+...         ....         ......++..+|+|+++.
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~---------~~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV---------GLSA---------KKSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc---------cccc---------ccccccCCCHHHHHHHHH
Confidence            6 89998887653       36899999999988765211         0000         011234678999999999


Q ss_pred             HHhcCCc
Q 023078          201 QVLGNEK  207 (287)
Q Consensus       201 ~~~~~~~  207 (287)
                      .++....
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9997643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.60  E-value=3.3e-15  Score=122.03  Aligned_cols=178  Identities=19%  Similarity=0.154  Sum_probs=114.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.+...+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA--------AEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999866532111        111357889999999999888887643     7999


Q ss_pred             EEEccCCCcc---------------------chHHHHHh----CC--C--CCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD---------------------EVEPILDA----LP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~---------------------~~~~l~~a----~~--~--~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +||+||....                     +...+.++    ++  +  ..++|++||...+..           ..+.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~  174 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----------RPYS  174 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----------CTTC
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----------CCCc
Confidence            9999987321                     12222333    22  2  468999999765311           1223


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|...+.+.+       ..++++..++||.+..+....     +    .......  ........+.+++|+|++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~----~~~~~~~--~~~~~~~~~~~pedvA~~  243 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK-----M----KAGVPQA--DLSIKVEPVMDVAHVASA  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh-----h----cccchhh--hhcccccCCCCHHHHHHH
Confidence            346 99999887753       358999999999987763111     1    0100000  001122347899999999


Q ss_pred             HHHHhcCCcC
Q 023078          199 FVQVLGNEKA  208 (287)
Q Consensus       199 ~~~~~~~~~~  208 (287)
                      ++.++..+..
T Consensus       244 v~fL~s~~~~  253 (272)
T 4dyv_A          244 VVYMASLPLD  253 (272)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCCc
Confidence            9999987553

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.60  E-value=2.6e-15  Score=123.40  Aligned_cols=194  Identities=16%  Similarity=0.162  Sum_probs=131.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~v   76 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+..        .+...++.++.+|++|.+++.++++.    .++|++
T Consensus        36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA--------DELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            799999999999999999999999999876532111        11235789999999999888887763    268999


Q ss_pred             EEc-cCCCc-------------------------cchHHHHHhC------------CCCCcEEEEeeeeEeecCCCCCCC
Q 023078           77 YDI-NGREA-------------------------DEVEPILDAL------------PNLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        77 i~~-a~~~~-------------------------~~~~~l~~a~------------~~~~~~i~~Ss~~~y~~~~~~~~~  118 (287)
                      ||+ ++...                         .+..++.+++            .+..++|++||...+..       
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  180 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-------  180 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-------
Confidence            999 54321                         0122233322            13458999999876421       


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                          ..+...| .+|...+.+.+       ..+++++.++||.+..+.... .............+.        ...+.
T Consensus       181 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~~~~  247 (281)
T 3ppi_A          181 ----QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--------PKRLG  247 (281)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--------SSSCB
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--------CCCCC
Confidence                1123346 99998887653       358999999999987652111 111222233332221        12468


Q ss_pred             eHHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +++|+|++++.++......|+.+++.+|..++
T Consensus       248 ~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          248 TPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            89999999999998766689999999887654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.60  E-value=6.1e-15  Score=120.20  Aligned_cols=195  Identities=8%  Similarity=0.051  Sum_probs=130.6

Q ss_pred             CCcccc--hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+  ||+++++.|+++|++|++++|+..... .+.    ....+. ..++.++.+|++|.+++.++++..     .
T Consensus        13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A           13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVH----ELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHH----HHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHH----HHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            799988  999999999999999999999854311 110    001111 136899999999998888877642     6


Q ss_pred             ccEEEEccCCCcc------------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +|++||++|....                        +..++++++    +...++|++||...+..           ..
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  156 (266)
T 3oig_A           88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----------MP  156 (266)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CT
T ss_pred             eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----------CC
Confidence            8999999986420                        122344443    23468999999765321           11


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ....| .+|...+.+.+       ..+++++.++||.+..+..... .............+.         ..+.+++|+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dv  227 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEV  227 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            23346 89999887753       3589999999999988642211 112222333222221         235678999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      |++++.++....  ..|+.+++.+|..
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeE
Confidence            999999997533  4789999988864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.60  E-value=3.4e-15  Score=120.69  Aligned_cols=180  Identities=15%  Similarity=0.112  Sum_probs=112.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..    ++|++
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l   87 (252)
T 3h7a_A           13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-----AEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT   87 (252)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence            799999999999999999999999999876532211     122222457899999999999888887643    78999


Q ss_pred             EEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           77 YDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      ||+||....                    +...+.++    ++  +..++|++||...+..           ......| 
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  156 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG-----------GSGFAAFA  156 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC-----------CTTCHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC-----------CCCCccHH
Confidence            999996321                    22233333    33  5679999999865321           1122346 


Q ss_pred             cchHHHHHHHH-------hcCCcE-EEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~-~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      .+|...+.+.+       ..++++ ..+.||.+..+..... ......         ......... +.+++|+|++++.
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-~~~~~~---------~~~~~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-REQMFG---------KDALANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-chhhhh---------hhhhcCCcc-CCCHHHHHHHHHH
Confidence            99998887653       358999 8999998876632111 000000         001111223 8899999999999


Q ss_pred             HhcCCc
Q 023078          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       226 l~s~~~  231 (252)
T 3h7a_A          226 LYQQPK  231 (252)
T ss_dssp             HHHCCG
T ss_pred             HHhCch
Confidence            998654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.60  E-value=3.2e-15  Score=123.15  Aligned_cols=206  Identities=16%  Similarity=0.142  Sum_probs=131.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCC----CC-------CchhhhhhcCCcEEEEecCCChHHHHhhhc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP----GE-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   69 (287)
                      |||+|.||+++++.|+++|++|++++|+.........    ..       ....+.....++.++.+|++|.+++.++++
T Consensus        17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   96 (286)
T 3uve_A           17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD   96 (286)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            7999999999999999999999999997432111100    00       001112224578899999999998888776


Q ss_pred             cC-----CccEEEEccCCCcc---------------------chHHHHHhC----C--C-CCcEEEEeeeeEeecCCCCC
Q 023078           70 AK-----GFDVVYDINGREAD---------------------EVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLP  116 (287)
Q Consensus        70 ~~-----~~d~vi~~a~~~~~---------------------~~~~l~~a~----~--~-~~~~i~~Ss~~~y~~~~~~~  116 (287)
                      ..     ++|++||+||....                     +..++++++    .  + ..++|++||...+..     
T Consensus        97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  171 (286)
T 3uve_A           97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA-----  171 (286)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----
T ss_pred             HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC-----
Confidence            32     79999999986321                     122333332    2  2 468999999875321     


Q ss_pred             CCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcC---CC------ccc
Q 023078          117 HCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP------IPI  179 (287)
Q Consensus       117 ~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~---~~------~~~  179 (287)
                            ......| .+|...+.+.+       ..++++..++||.+..+.......   .......   ..      ...
T Consensus       172 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  242 (286)
T 3uve_A          172 ------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT---FKMFRPDLENPGPDDMAPICQ  242 (286)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHHHHHHHHH
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch---hhhccccccccchhhHHHHHH
Confidence                  1122346 99998887653       368999999999998875322110   0111000   00      000


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       180 ~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ...... ..+.+++|+|++++.++....  -.|+.+++.+|..+
T Consensus       243 ~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          243 MFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            011111 457899999999999987543  36899999988643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.59  E-value=7.9e-15  Score=118.74  Aligned_cols=196  Identities=16%  Similarity=0.191  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC---------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------   71 (287)
                      |||+|.||+++++.|+++|++|++++++.....+..    ..++.....++.++.+|+++.+++.++++..         
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET----VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH----HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            899999999999999999999999755443311111    1122223456788999999988877776531         


Q ss_pred             --CccEEEEccCCCcc--------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           72 --GFDVVYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 --~~d~vi~~a~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                        .+|++||+||....                    +...+++++.    +..++|++||...+..           ...
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------LPD  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC-----------CTT
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC-----------CCC
Confidence              39999999987321                    2334455433    3458999999865321           112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+..+....... ..+........+         ...+.+++|+|
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva  228 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA---------FNRLGEVEDIA  228 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------TSSCBCHHHHH
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------cCCCCCHHHHH
Confidence            2346 99998887653       358999999999998875322111 111222222221         12456799999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      +++..++...  ...|+.+++.+|..
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             HHHHHHhCcccCCccCCEEEecCCee
Confidence            9999988653  23789999988753

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.59  E-value=4.5e-15  Score=120.62  Aligned_cols=180  Identities=20%  Similarity=0.137  Sum_probs=115.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A           10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-----TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532211     122222456788999999998888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +...+.++    ++  +..++|++||...+..           ......|
T Consensus        85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  153 (264)
T 3tfo_A           85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-----------VPTAAVY  153 (264)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-----------CCCChhH
Confidence            9999987421                    12223333    32  5679999999875421           1122346


Q ss_pred             -cchHHHHHHHH----h-cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 -KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 -~~k~~~E~~~~----~-~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                       .+|...+.+.+    + .++++..++||.+..+....     +    ..........  .....+...+|+|++++.++
T Consensus       154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-----~----~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~  222 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT-----I----THEETMAAMD--TYRAIALQPADIARAVRQVI  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc-----c----cchhHHHHHH--hhhccCCCHHHHHHHHHHHh
Confidence             99998887653    2 38999999999987763111     0    0000000000  01112468999999999999


Q ss_pred             cCCc
Q 023078          204 GNEK  207 (287)
Q Consensus       204 ~~~~  207 (287)
                      ..+.
T Consensus       223 s~~~  226 (264)
T 3tfo_A          223 EAPQ  226 (264)
T ss_dssp             HSCT
T ss_pred             cCCc
Confidence            8765

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.59  E-value=1.9e-14  Score=119.03  Aligned_cols=195  Identities=13%  Similarity=0.080  Sum_probs=132.1

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|  .||+++++.|+++|++|++++|+.+... .+     ........++.++.+|++|.+++.++++..     ++
T Consensus        36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK-RV-----DPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHH-HH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            79987  9999999999999999999999854311 11     111111245788999999999888887643     78


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        +..++++++    +...++|++||...+..           ...
T Consensus       110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-----------~~~  178 (296)
T 3k31_A          110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-----------VPH  178 (296)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CTT
T ss_pred             CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-----------CCC
Confidence            999999986421                        133344443    23458999999875321           112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+..+...... ............++         ..+..++|+|
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  249 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVG  249 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2346 89999887753       35899999999999987532211 11222222222222         1346689999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      ++++.++...  ...|+.+++.+|..+
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCCccCCccCCEEEECCCccc
Confidence            9999999753  337899999988654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.59  E-value=1.2e-15  Score=127.59  Aligned_cols=191  Identities=10%  Similarity=0.071  Sum_probs=115.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhc--CCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS--SKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+....  .++.++.+|+++.+++.++++..     .+
T Consensus        14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A           14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-----ATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876532211     1111112  27889999999999888887632     68


Q ss_pred             cEEEEccCCCc--------------------cchHHHHHhCC------------CCCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           74 DVVYDINGREA--------------------DEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        74 d~vi~~a~~~~--------------------~~~~~l~~a~~------------~~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                      |++||+||...                    .++.++++++.            +..++|++||...+...         
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---------  159 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---------  159 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---------
Confidence            99999999632                    12333444322            24579999998764321         


Q ss_pred             CCCCCccc-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCC-CCceeeeee
Q 023078          122 TVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGS-GIQVTQLGH  191 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~  191 (287)
                        .....| .+|...+.+.       ...+++++.++||.+.++..... .....+.............. .......++
T Consensus       160 --~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (319)
T 3ioy_A          160 --GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME  237 (319)
T ss_dssp             --SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBC
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCC
Confidence              112346 9999666543       24589999999999988742111 00000000000000000000 011112279


Q ss_pred             HHHHHHHHHHHhcCCc
Q 023078          192 VKDLARAFVQVLGNEK  207 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~  207 (287)
                      ++|+|++++.+++++.
T Consensus       238 pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          238 PDVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999998753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.59  E-value=2.7e-15  Score=124.32  Aligned_cols=209  Identities=12%  Similarity=0.164  Sum_probs=131.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCC-------CchhhhhhcCCcEEEEecCCChHHHHhhhccC--
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE-------SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--   71 (287)
                      |||+|.||+++++.|+++|++|++++|++......+...       ....+.....++.++.+|++|.+++.++++..  
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  113 (299)
T 3t7c_A           34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT  113 (299)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            799999999999999999999999999743211111000       01112233467899999999998888877632  


Q ss_pred             ---CccEEEEccCCCcc---------------------chHHHHHh----CC---CCCcEEEEeeeeEeecCCCCCCCCC
Q 023078           72 ---GFDVVYDINGREAD---------------------EVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        72 ---~~d~vi~~a~~~~~---------------------~~~~l~~a----~~---~~~~~i~~Ss~~~y~~~~~~~~~e~  120 (287)
                         .+|++||+||....                     +...+.++    +.   +..++|++||...+..         
T Consensus       114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~---------  184 (299)
T 3t7c_A          114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG---------  184 (299)
T ss_dssp             HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC---------
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC---------
Confidence               79999999986321                     12233333    21   3568999999875321         


Q ss_pred             CCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcc------cCCCCCce
Q 023078          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQV  186 (287)
Q Consensus       121 ~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  186 (287)
                        ......| .+|...+.+.+       ..++++..++||.+..+.....................      ....... 
T Consensus       185 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  261 (299)
T 3t7c_A          185 --AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-  261 (299)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-
Confidence              1122346 99999887653       35899999999999888532211000000000000000      0000001 


Q ss_pred             eeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          187 TQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       187 ~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ..+..++|+|++++.++....  ..|+.+++.+|..+
T Consensus       262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            346789999999999997543  36899999988643

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.58  E-value=8.1e-16  Score=123.99  Aligned_cols=188  Identities=14%  Similarity=0.107  Sum_probs=128.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.+...+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A           12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA--------ASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999876532111        112357889999999999888877642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +..++.++    ++  + ..++|++||...+...           .+...
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  152 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----------PNMAA  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----------TTCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----------CCchh
Confidence            9999996321                    22333333    33  3 5799999997754321           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC---chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       ..++++..++||.+..+....   .....+....   .+         ...+..++|+|+
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~---------~~r~~~pedva~  220 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA---------MKGKGQPEHIAD  220 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS---------SCSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc---------cCCCcCHHHHHH
Confidence            6 89988887653       368999999999987763110   0000011000   11         123467899999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCC
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++..++....  -.|+.+++.+|.
T Consensus       221 ~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          221 VVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            9999987643  368899998874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.58  E-value=2.7e-15  Score=119.04  Aligned_cols=176  Identities=17%  Similarity=0.142  Sum_probs=123.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||+|+||+++++.|+++|++|++++|+..                         +|++|++++.++++.. ++|++||+
T Consensus        12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A           12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999998632                         6899998888887643 69999999


Q ss_pred             cCCCc---------------------cchHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchH
Q 023078           80 NGREA---------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (287)
Q Consensus        80 a~~~~---------------------~~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~  133 (287)
                      ||...                     .+..++.+++.    ...++|++||...+..           ..+...| .+|.
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~asK~  135 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------VANTYVKAAINA  135 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------CCCchHHHHHHH
Confidence            99641                     12333444432    2358999999865421           1123346 8999


Q ss_pred             HHHHHHH----hc-CCcEEEEccCceecCCCCCch---hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          134 NTESVLE----SK-GVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       134 ~~E~~~~----~~-~~~~~ilr~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      ..+.+.+    +. .+++..++||.+..+......   ...+........+.         ..+.+++|+|++++.++..
T Consensus       136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHHHccC
Confidence            9887763    22 399999999999887422111   11122222222221         2467899999999999987


Q ss_pred             CcCCCceEEeeCCCcc
Q 023078          206 EKASRQVFNISGEKYV  221 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~  221 (287)
                      ....|+.+++.+|..+
T Consensus       207 ~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          207 SYMTGTVIDVDGGALL  222 (223)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCCCcEEEecCCeec
Confidence            6667899999988654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.58  E-value=2.5e-14  Score=118.12  Aligned_cols=195  Identities=10%  Similarity=0.077  Sum_probs=129.8

Q ss_pred             CCcccc--hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|+  ||+++++.|+++|++|++++|++... +.+     ..+.....++.++.+|++|.+++.++++..     ++
T Consensus        37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRV-----EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHH-----HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHH-----HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799988  99999999999999999999985321 111     111222346889999999999888887642     79


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        +...++++    ++...++|++||...+...           ..
T Consensus       111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----------~~  179 (293)
T 3grk_A          111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM-----------PN  179 (293)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC-----------TT
T ss_pred             CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC-----------Cc
Confidence            999999997420                        12223333    3345689999998754221           12


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..++++..++||.+..+..... .............+.         ..+..++|+|
T Consensus       180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  250 (293)
T 3grk_A          180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVG  250 (293)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            2346 99999887753       3589999999999988742111 112222222222221         2356789999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++++.++....  ..|+.+++.+|..+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCccccCCcceEEEECCCccc
Confidence            99999987532  47899999988653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.58  E-value=5e-15  Score=118.53  Aligned_cols=175  Identities=13%  Similarity=0.110  Sum_probs=119.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-------CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|++....               ....++.+|++|.+++.++++.       -++
T Consensus         9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999865521               2346678999998888777653       279


Q ss_pred             cEEEEccCCCc------c---------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           74 DVVYDINGREA------D---------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~------~---------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |++||+||...      .               +..++.+++    +...++|++||...+..           ..+...
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  142 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHH
Confidence            99999998532      1               122223332    22358999999875421           122334


Q ss_pred             c-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+         ..+++++.++||.+.++.         .......         .....+++.+|+|++
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPN---------ADHSSWTPLSFISEH  204 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTT---------CCGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCC---------ccccccCCHHHHHHH
Confidence            6 89999887753         235999999999987761         1111111         111245778999999


Q ss_pred             HHHHhcCC---cCCCceEEeeCCC
Q 023078          199 FVQVLGNE---KASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~---~~~~~~~~~~~~~  219 (287)
                      ++..+..+   ...|+.+++.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            98766332   2358888887764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.58  E-value=1.2e-15  Score=124.88  Aligned_cols=193  Identities=12%  Similarity=0.106  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~v   76 (287)
                      |||+|.||+++++.|+++|++|++++|+.......     ..++.....++.++.+|++|.+++.++++..    .+|++
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l  113 (275)
T 4imr_A           39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAV-----QQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL  113 (275)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHH-----HHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence            89999999999999999999999999987653221     1122223467899999999988877776532    78999


Q ss_pred             EEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           77 YDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      ||+||....                    +..++++++    +  +..++|++||...+.           +..+...| 
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~  182 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVVTAYA  182 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCchhhH
Confidence            999996321                    233334442    2  567999999986532           11222336 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .+|...+.+.+       ..++++..++||.+..+......  .+.......... ++         .-+..++|+|+++
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v  253 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCcCHHHHHHHH
Confidence            99999887753       35899999999998776210000  011111111111 11         1245689999999


Q ss_pred             HHHhcCCc--CCCceEEeeCC
Q 023078          200 VQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~  218 (287)
                      +.++....  ..|+.+++.+|
T Consensus       254 ~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          254 LFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHcCcccCCCCCCEEEeCCC
Confidence            99987543  36889998776

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.58  E-value=1.8e-14  Score=117.26  Aligned_cols=197  Identities=16%  Similarity=0.155  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-h-cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+..     ..+.. . ..++.++.+|++|.+++.++++..     .+
T Consensus        14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A           14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-----SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999866532111     11111 1 235889999999998888777642     78


Q ss_pred             cEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||+||....                    +...+.++    ++  +..++|++||...+..           .....
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-----------EPHMV  157 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----------CTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----------CCCch
Confidence            999999987321                    12333333    23  4678999999865311           11223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc---------hhHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      .| .+|...+.+.+       ..++++..++||.+..+.....         -...+...+......+       ...+.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~  230 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-------LGRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-------TCSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-------cCCCc
Confidence            46 99998887753       3589999999999877621000         0011111111111111       12467


Q ss_pred             eHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .++|+|++++.++....  ..|+.+++.+|..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            89999999999987532  3788999988753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.57  E-value=1.2e-14  Score=118.48  Aligned_cols=177  Identities=17%  Similarity=0.156  Sum_probs=122.6

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC------
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~------   71 (287)
                      |||+|+||+++++.|+++|   ++|++++|+...... +     .++.....++.++.+|+++.+++.++++..      
T Consensus        27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-H-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            8999999999999999999   999999998765221 1     122222357899999999998888887632      


Q ss_pred             -CccEEEEccCCCc---------------------cchHHHHHhCC-----C------------CCcEEEEeeeeEeecC
Q 023078           72 -GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKS  112 (287)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~l~~a~~-----~------------~~~~i~~Ss~~~y~~~  112 (287)
                       ++|++||+||...                     .+..++++++.     .            ..++|++||...+...
T Consensus       101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence             6999999998643                     01223333321     1            4789999998765322


Q ss_pred             CCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCC
Q 023078          113 DLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI  184 (287)
Q Consensus       113 ~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (287)
                      .        ...+...| .+|...+.+.+       ..+++++++|||.+..+...              .         
T Consensus       181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------------~---------  229 (267)
T 1sny_A          181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG--------------S---------  229 (267)
T ss_dssp             C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC--------------T---------
T ss_pred             C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC--------------C---------
Confidence            1        11133346 99999887763       25899999999998666210              0         


Q ss_pred             ceeeeeeHHHHHHHHHHHhcCC--cCCCceEEee
Q 023078          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNIS  216 (287)
Q Consensus       185 ~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~  216 (287)
                        ..++..+|+|+.++.++...  ...|..+.+.
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  261 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYD  261 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccC
Confidence              12467899999999998753  2255555544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.57  E-value=9.2e-14  Score=114.52  Aligned_cols=192  Identities=15%  Similarity=0.117  Sum_probs=127.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCC-ccccccCCCCCchhhh-hhcCCcEEEEecCCC----hHHHHhhhccC---
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~~~---   71 (287)
                      |||+|+||+++++.|+++|++|++++|+. ....+..     ..+. ....++.++.+|+++    .+++.++++..   
T Consensus        29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA-----DELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-----HHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            89999999999999999999999999987 4321110     1111 123568899999999    88887776532   


Q ss_pred             --CccEEEEccCCCc----------c-----c---------------hHHH----HHhCC--C------CCcEEEEeeee
Q 023078           72 --GFDVVYDINGREA----------D-----E---------------VEPI----LDALP--N------LEQFIYCSSAG  107 (287)
Q Consensus        72 --~~d~vi~~a~~~~----------~-----~---------------~~~l----~~a~~--~------~~~~i~~Ss~~  107 (287)
                        ++|++||+||...          .     .               ...+    +..++  +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              7999999998631          1     0               1112    23333  2      56899999976


Q ss_pred             EeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCccc
Q 023078          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       108 ~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      .+..           ..+...| .+|...+.+.+       ..+++++.++||.++++. . . .......+....+.  
T Consensus       184 ~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~~~~~~~~~~~~p~--  247 (288)
T 2x9g_A          184 VDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-GEEEKDKWRRKVPL--  247 (288)
T ss_dssp             TTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-CHHHHHHHHHTCTT--
T ss_pred             ccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-ChHHHHHHHhhCCC--
Confidence            5321           1123346 89998877653       358999999999999985 2 1 12122222222211  


Q ss_pred             CCCCCceeee-eeHHHHHHHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          180 PGSGIQVTQL-GHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       180 ~~~~~~~~~~-i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                       +      .+ ..++|+|++++.++...  ...|+.+++.+|..
T Consensus       248 -~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          248 -G------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             -T------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -C------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence             1      23 67899999999998753  23688899888754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.57  E-value=1.2e-14  Score=116.25  Aligned_cols=185  Identities=18%  Similarity=0.117  Sum_probs=124.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhh-hhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.++..+..     ..+. ....++.++.+|++|.+++.++++..     ++|
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (235)
T 3l77_A            8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIA-----HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD   82 (235)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999876532211     1111 22467889999999999998888743     799


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      ++||+||....                    +..++++++    + +..++|++||...+..           ......|
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  151 (235)
T 3l77_A           83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----------IPYGGGY  151 (235)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----------CTTCHHH
T ss_pred             EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----------CCCcchH
Confidence            99999987321                    233334443    2 3456777777653211           1112236


Q ss_pred             -cchHHHHHHHH-----hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          130 -KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       130 -~~k~~~E~~~~-----~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                       .+|...+.+.+     ..+++++.++||.+..+.....               .  . ......++.++|+|+++..++
T Consensus       152 ~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~---------------~--~-~~~~~~~~~p~dva~~v~~l~  213 (235)
T 3l77_A          152 VSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK---------------P--G-KPKEKGYLKPDEIAEAVRCLL  213 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC---------------S--C-CCGGGTCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc---------------C--C-cccccCCCCHHHHHHHHHHHH
Confidence             89999888764     3589999999998876531100               0  0 111125688999999999999


Q ss_pred             cCCcC--CCceEEeeCCC
Q 023078          204 GNEKA--SRQVFNISGEK  219 (287)
Q Consensus       204 ~~~~~--~~~~~~~~~~~  219 (287)
                      ..+..  .+++....++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          214 KLPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             TSCTTCCCCEEEECCTTS
T ss_pred             cCCCCCccceEEEeeccc
Confidence            87643  45555554443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.57  E-value=2.3e-14  Score=115.55  Aligned_cols=189  Identities=14%  Similarity=0.116  Sum_probs=121.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..        .+...++.++.+|++|.+++.++++..     ++|+
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELK--------DELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            899999999999999999999999999865422110        111246888999999999998887643     6899


Q ss_pred             EEEccCCCc--c-------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREA--D-------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~--~-------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||...  .                   +...+.++    ++  +..++|++||...+..           ..+...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNV  146 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-----------CCCCch
Confidence            999998641  0                   12223333    32  5689999999865321           112334


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceec-CCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYG-PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       ..+++++.++||.+.| +.....+     ..  ......   .......+++++|+|+++
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~-----~~--~~~~~~---~~~~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF-----KG--DDGKAE---KTYQNTVALTPEDVSEAV  216 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcc-----cC--chHHHH---HHHhccCCCCHHHHHHHH
Confidence            6 99999888763       2489999999999984 5211000     00  000000   000011346899999999


Q ss_pred             HHHhcCCc-CCCceEEeeCC
Q 023078          200 VQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~-~~~~~~~~~~~  218 (287)
                      +.++..+. ..+..+.+.+.
T Consensus       217 ~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          217 WWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHSCTTCCCCEEEECCT
T ss_pred             HHHhcCCccceeeEEEEccc
Confidence            99987643 35566666543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.57  E-value=8.1e-15  Score=118.11  Aligned_cols=181  Identities=17%  Similarity=0.125  Sum_probs=118.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     .++.....++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALG-----DELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     111222356889999999998888777532     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +..++.+++    .  + .++|++||...+..           ..+...|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  155 (247)
T 2jah_A           88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------VRNAAVY  155 (247)
T ss_dssp             EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------CCCCcHH
Confidence            9999986321                    222333332    2  4 79999999765321           1122346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       ..+++++.++||.+..+................   .  ++    .+.+++.+|+|++++.
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~---~--~~----~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ---R--IS----QIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH---H--TT----TSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh---c--cc----ccCCCCHHHHHHHHHH
Confidence             89988876652       468999999999998774211000111111110   0  11    1125889999999999


Q ss_pred             HhcCCc
Q 023078          202 VLGNEK  207 (287)
Q Consensus       202 ~~~~~~  207 (287)
                      ++..+.
T Consensus       227 l~s~~~  232 (247)
T 2jah_A          227 AVTAPH  232 (247)
T ss_dssp             HHHSCT
T ss_pred             HhCCCc
Confidence            987643

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.57  E-value=1.8e-14  Score=120.83  Aligned_cols=194  Identities=11%  Similarity=0.034  Sum_probs=130.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEe-cCCccccccCCCCCchhhh-hhcCCcEEEEecCCChH----------------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~----------------   62 (287)
                      |||+|+||+++++.|+++|++|++++ |+.....+..     ..+. ....++.++.+|++|.+                
T Consensus        52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            89999999999999999999999999 8755422111     1111 11356889999999988                


Q ss_pred             -HHHhhhccC-----CccEEEEccCCCcc----------------------------------chHHHHHh----CC--C
Q 023078           63 -FVKSSLSAK-----GFDVVYDINGREAD----------------------------------EVEPILDA----LP--N   96 (287)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~a~~~~~----------------------------------~~~~l~~a----~~--~   96 (287)
                       ++.++++..     .+|++||+||....                                  +...++++    +.  +
T Consensus       127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  206 (328)
T 2qhx_A          127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  206 (328)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             887777632     78999999986311                                  11122232    22  3


Q ss_pred             ------CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc
Q 023078           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (287)
Q Consensus        97 ------~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~  162 (287)
                            ..++|++||...+..           ..+...| .+|...+.+.+       ..+++++.++||.+..+. . .
T Consensus       207 ~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~  273 (328)
T 2qhx_A          207 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M  273 (328)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-S
T ss_pred             CcCCCCCcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-c
Confidence                  578999999765321           1123346 99999887753       358999999999998885 2 2


Q ss_pred             hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      . +.....+....++   +     .-+..++|+|++++.++...  ...|+.+++.+|..+
T Consensus       274 ~-~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          274 P-PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             C-HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             c-HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            1 2233333332221   1     03567999999999998643  236889999887543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.56  E-value=5.8e-15  Score=120.06  Aligned_cols=193  Identities=14%  Similarity=0.202  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111     111112346888999999998887776532     7899


Q ss_pred             EEEccCCC-cc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~-~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||.. ..                    +..+++++    +.  +..++|++||...+...           .....
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  156 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCCch
Confidence            99999864 11                    12223333    22  56799999998754221           12234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc------------h--hHH-HHHHHHcCCCcccCCCCCc
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------V--EEW-FFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~------------~--~~~-~~~~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       ..+++++.++||.+..+.....            .  ... ....+....+         
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------  227 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP---------  227 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST---------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC---------
Confidence            6 88988776652       3589999999998866521000            0  000 1111111111         


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                      ...+...+|+|++++.++....  ..|+.+.+.+|
T Consensus       228 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          228 MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            1135678999999999887532  36778877654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.56  E-value=9.8e-15  Score=117.98  Aligned_cols=190  Identities=13%  Similarity=0.098  Sum_probs=124.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecC--CChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~--~~~~~~~~~~~~~-----~   72 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+.. ...++.++.+|+  ++.+++.++++..     +
T Consensus        18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   92 (252)
T 3f1l_A           18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA-----SHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR   92 (252)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999876532211     11111 123788999999  8888777776532     6


Q ss_pred             ccEEEEccCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|++||+||...                     .+...+.+++    +  +..++|++||...+..           ..+
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~  161 (252)
T 3f1l_A           93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-----------RAN  161 (252)
T ss_dssp             CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC-----------CCC
Confidence            999999998631                     1223334442    2  5679999999765311           112


Q ss_pred             Cccc-cchHHHHHHHH----hc--CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~----~~--~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ...| .+|...+.+.+    +.  .+++..+.||.+..+         +........         ....+..++|+|++
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva~~  223 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------MRASAFPTE---------DPQKLKTPADIMPL  223 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------HHHHHCTTC---------CGGGSBCTGGGHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------hhhhhCCcc---------chhccCCHHHHHHH
Confidence            2346 99999887753    22  388999999987554         111111111         11236788999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCcccHH
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKYVTFD  224 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~~s~~  224 (287)
                      ++.++....  ..|+.+++.+|...++.
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            999987643  36899999998766554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.56  E-value=1.1e-15  Score=124.27  Aligned_cols=201  Identities=12%  Similarity=0.092  Sum_probs=124.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|....... +. ....++.....++.++.+|++|.+++.++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-AN-KLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHH-HH-HHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHH-HH-HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999886433110 00 001112222457889999999999888887642     7999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                    +...+.+++.    +..++|++||...+....           ....| .
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-----------~~~~Y~a  163 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG-----------FYSTYAG  163 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------CCCC---
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------CCchhHH
Confidence            9999996321                    2333444432    446899999987543221           12235 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+.+       ..++++..++||.+..+......         ................+..++|+|++++.++
T Consensus       164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~  234 (262)
T 3ksu_A          164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---------TKESTAFHKSQAMGNQLTKIEDIAPIIKFLT  234 (262)
T ss_dssp             --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCCCSCCGGGTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---------chHHHHHHHhcCcccCCCCHHHHHHHHHHHc
Confidence            8998887753       35899999999988654200000         0000000011111234678899999999998


Q ss_pred             cCC-cCCCceEEeeCCCcccH
Q 023078          204 GNE-KASRQVFNISGEKYVTF  223 (287)
Q Consensus       204 ~~~-~~~~~~~~~~~~~~~s~  223 (287)
                      ... ...|+.+++.++.....
T Consensus       235 s~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          235 TDGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TTTTTCCSCEEEESTTCCCC-
T ss_pred             CCCCCccCCEEEECCCccCCC
Confidence            762 23689999988865443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.56  E-value=2.5e-14  Score=117.09  Aligned_cols=194  Identities=11%  Similarity=0.055  Sum_probs=128.1

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+  |+||+++++.|+++|++|++++|+... .+.+     .++.....++.++.+|++|.+++.++++..     ++
T Consensus        12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A           12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998641 1111     111111134788999999998888877632     68


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+||....                        +..++++++.    ...++|++||...+..           ..+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------MAH  154 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------CCC
Confidence            999999986421                        1233444433    2358999999764311           112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       ..+++++.++||.+.++..... ........+....++         ..+.+++|+|
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva  225 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  225 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2346 89999887753       3489999999999988742211 111222222222111         1246789999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++++.++....  ..|+.+++.++..
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999986532  3678899887753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.56  E-value=1.7e-14  Score=115.76  Aligned_cols=175  Identities=11%  Similarity=0.047  Sum_probs=121.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-------CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+.....               ....++.+|++|++++.++++.       -++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A           13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999865421               1346778999999888877763       279


Q ss_pred             cEEEEccCCCc------c---------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           74 DVVYDINGREA------D---------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        74 d~vi~~a~~~~------~---------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      |++||+||...      .               +...+.+++    +...++|++||...+..           ..+...
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------TPGMIG  146 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------CCCchH
Confidence            99999998532      1               122233332    22358999999876421           112334


Q ss_pred             c-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+         ..+++++.++||.+-.+.         .......         .....+++.+|+|++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~---------~~~~~~~---------~~~~~~~~~~~vA~~  208 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---------NRKSMPE---------ADFSSWTPLEFLVET  208 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---------HHHHSTT---------SCGGGSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc---------ccccCcc---------hhhccCCCHHHHHHH
Confidence            6 89999887763         346999999999886551         1111111         112345788999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++....  ..|+.+++.++.
T Consensus       209 v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          209 FHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHhcCCCcCccceEEEEeCCC
Confidence            999987543  357888887654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.55  E-value=1.3e-14  Score=119.46  Aligned_cols=191  Identities=12%  Similarity=0.084  Sum_probs=128.2

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC----
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~----   71 (287)
                      |||+|.||+++++.|+++|+   +|++++|+.....+..     ..+...  ..++.++.+|++|.+++.++++..    
T Consensus        39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK-----KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999987   9999999876532111     111111  346888999999999998888753    


Q ss_pred             -CccEEEEccCCCc---------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           72 -GFDVVYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        72 -~~d~vi~~a~~~~---------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                       ++|++||+||...                     .+..++.+++    +  +..++|++||...+..           .
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~  182 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA-----------Y  182 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------C
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC-----------C
Confidence             6999999998632                     1233334443    2  6679999999865311           1


Q ss_pred             CCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC---CchhHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       124 ~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      .....| .+|...+.+.+       ..+++++.++||.+..+...   ........ .....            ..++.+
T Consensus       183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~------------~~p~~p  249 (287)
T 3rku_A          183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAK-NVYKD------------TTPLMA  249 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHH-HHHTT------------SCCEEH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHH-Hhhcc------------cCCCCH
Confidence            123346 99998887753       36899999999999876210   00000000 10000            123489


Q ss_pred             HHHHHHHHHHhcCCcC--CCceEEeeCCCc
Q 023078          193 KDLARAFVQVLGNEKA--SRQVFNISGEKY  220 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~~--~~~~~~~~~~~~  220 (287)
                      +|+|++++.++..+..  .++++.+.+++.
T Consensus       250 edvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          250 DDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            9999999999987543  477888887764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.55  E-value=3e-14  Score=116.31  Aligned_cols=191  Identities=14%  Similarity=0.097  Sum_probs=121.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+.. ..++.++.+|++|.+++.++++..     .+|+
T Consensus        27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALA-----GELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            899999999999999999999999999865422111     01111 136888999999999998888742     4799


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC--CCC-cEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~--~~~-~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||+||....                     +    ++.++..++  +.. ++|++||...+..           ..+..
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~~~~~  169 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------YPGSH  169 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------CCCCc
Confidence            9999986421                     1    222333333  556 9999999865321           11223


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..+++++.++||.+.++.......    ..  .........    ...++..+|+|+++
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~----~~--~~~~~~~~~----~~~~~~pedvA~~v  239 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFG----GD--QARYDKTYA----GAHPIQPEDIAETI  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccc----cc--hHHHHHhhc----cCCCCCHHHHHHHH
Confidence            46 99999888763       257999999999998773211000    00  000000000    11247899999999


Q ss_pred             HHHhcCCcC-CCceEEeeCC
Q 023078          200 VQVLGNEKA-SRQVFNISGE  218 (287)
Q Consensus       200 ~~~~~~~~~-~~~~~~~~~~  218 (287)
                      +.++..+.. .++.+.+.++
T Consensus       240 ~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          240 FWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHTSCTTEEEEEEEEEET
T ss_pred             HHHhCCCccCccceEEEeec
Confidence            999976432 4556666544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.55  E-value=4e-15  Score=119.77  Aligned_cols=179  Identities=15%  Similarity=0.149  Sum_probs=107.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHH---HhhhccC-CccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSAK-GFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~-~~d~v   76 (287)
                      |||+|+||+++++.|++ |+.|++++|+.........          ..++.++.+|+.+.+..   .+.++.. ++|++
T Consensus        11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A           11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999988 9999999998765322111          24688899999876441   2222222 69999


Q ss_pred             EEccCCCcc--------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           77 YDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        77 i~~a~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      ||+||....                    +...+.++    ++ ...++|++||...+...           .+...| .
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  148 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPH-----------PGNTIYAA  148 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCC-----------CCchHHHH
Confidence            999987321                    12222333    33 23789999998875422           122346 9


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...+.+.+       ..+++++.++||.+.++....     +....  +       .......+++++|+|++++.++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~--~-------~~~~~~~~~~p~dvA~~i~~l~  214 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQ--G-------TNFRPEIYIEPKEIANAIRFVI  214 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhh--h-------cccccccCCCHHHHHHHHHHHH
Confidence            9999888763       368999999999998873211     10000  0       0011234688999999999999


Q ss_pred             cCCcCCCceEEee
Q 023078          204 GNEKASRQVFNIS  216 (287)
Q Consensus       204 ~~~~~~~~~~~~~  216 (287)
                      ..+. .+.++++.
T Consensus       215 ~~~~-~~~~~~i~  226 (245)
T 3e9n_A          215 DAGE-TTQITNVD  226 (245)
T ss_dssp             TSCT-TEEEEEEE
T ss_pred             cCCC-ccceeeeE
Confidence            8765 45677764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.54  E-value=1.8e-14  Score=116.62  Aligned_cols=192  Identities=13%  Similarity=0.133  Sum_probs=127.0

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||+|.||+++++.|+++|  +.|++++|+.....+..        .+...++.++.+|++|.+++.++++..     ++
T Consensus         8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK--------EKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH--------HHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH--------HHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            8999999999999999984  78999999865522111        111357889999999999888887643     79


Q ss_pred             cEEEEccCCCcc---------------------chHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           74 DVVYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      |++||+||....                     +..++.+++    + ...++|++||...+..           ..+..
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~-----------~~~~~  148 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMY-----------FSSWG  148 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCS-----------SCCSH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccC-----------CCCcc
Confidence            999999987311                     223333333    3 2379999999875421           12233


Q ss_pred             cc-cchHHHHHHHH----h-cCCcEEEEccCceecCCCCCc--------hhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          128 RH-KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       128 ~~-~~k~~~E~~~~----~-~~~~~~ilr~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      .| .+|...+.+.+    + .++++..++||.+..+.....        ........+....+         ...+.+++
T Consensus       149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~  219 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NNQLLDSS  219 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC----CH
T ss_pred             hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cCCcCCcc
Confidence            46 99999887763    2 489999999999988742211        01112222222111         12467889


Q ss_pred             HHHHHHHHHhcCCc---CCCceEEeeCCCc
Q 023078          194 DLARAFVQVLGNEK---ASRQVFNISGEKY  220 (287)
Q Consensus       194 Dva~~~~~~~~~~~---~~~~~~~~~~~~~  220 (287)
                      |+|++++.++....   ..|+.+++.+++.
T Consensus       220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          220 VPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             HHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             cHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence            99999999887542   4788999877653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.54  E-value=4.9e-14  Score=112.63  Aligned_cols=169  Identities=17%  Similarity=0.147  Sum_probs=115.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..        .....++.++.+|++|.+++.++++..     .+|+
T Consensus         9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE--------LLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999999999999876532111        111236889999999998888877642     6899


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||....                    +...+.++    ++ ...++|++||...+...           .....| 
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~  149 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK-----------ANESLYC  149 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC-----------SSHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC-----------CCCcHHH
Confidence            9999997321                    22223333    33 23399999998754211           122346 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       ..++++..++||.+..+....         ...          .....+.+++|+|++++.+
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------~~~----------~~~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN---------TDH----------VDPSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc---------cCC----------CCCcCCCCHHHHHHHHHHH
Confidence            99999887753       357999999999987663110         000          0112578899999999999


Q ss_pred             hcCCc
Q 023078          203 LGNEK  207 (287)
Q Consensus       203 ~~~~~  207 (287)
                      +..+.
T Consensus       211 ~~~~~  215 (235)
T 3l6e_A          211 LEARS  215 (235)
T ss_dssp             TCCCS
T ss_pred             HhCCC
Confidence            98654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.53  E-value=3.3e-14  Score=116.71  Aligned_cols=181  Identities=13%  Similarity=0.095  Sum_probs=118.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     .++... ...+.++.+|++|.+++.++++..     .+|
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  113 (281)
T 4dry_A           39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA-----GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD  113 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999876532111     111111 223588999999999888877643     689


Q ss_pred             EEEEccCCCcc---------------------chHHHH----HhCC--C--CCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           75 VVYDINGREAD---------------------EVEPIL----DALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        75 ~vi~~a~~~~~---------------------~~~~l~----~a~~--~--~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      ++||+||....                     +...+.    ..++  +  ..++|++||...+..           ..+
T Consensus       114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~  182 (281)
T 4dry_A          114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----------RPN  182 (281)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----------CTT
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----------CCC
Confidence            99999986321                     122222    2222  2  468999999765311           122


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      ...| .+|...+.+.+       ..++++..++||.+..+..         ...... .... ........++.++|+|+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---------~~~~~~-~~~~-~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT---------ARMSTG-VLQA-NGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECT-TSCEEECCCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---------hhhcch-hhhh-hhcccccCCCCHHHHHH
Confidence            3346 99998887753       3689999999999877621         111111 0000 11112234788999999


Q ss_pred             HHHHHhcCCcC
Q 023078          198 AFVQVLGNEKA  208 (287)
Q Consensus       198 ~~~~~~~~~~~  208 (287)
                      +++.++..+..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999987653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.53  E-value=2.3e-14  Score=114.24  Aligned_cols=170  Identities=14%  Similarity=0.073  Sum_probs=113.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC--CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~d~vi~   78 (287)
                      |||+|.||+++++.|+++|++|++++|+.+...+...        +...++.++.+|+++.+++.++++..  ..|++||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN--------CLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            7999999999999999999999999998765322111        11357889999999999999888742  2499999


Q ss_pred             ccCCCcc--------------------chHHHHHh----CC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           79 INGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        79 ~a~~~~~--------------------~~~~l~~a----~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      +||....                    +..+++++    ++ ...++|++||...+..           ..+...| .+|
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK  147 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------KAQESTYCAVK  147 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------CTTCHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------CCCCchhHHHH
Confidence            9986321                    22233333    23 2338999999875421           1123346 999


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      ...+.+.+       ..++++..++||.+..+..         .....         ......+.+++|+|+++..++..
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---------~~~~~---------~~~~~~~~~~~dvA~~i~~l~~~  209 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW---------ETSGK---------SLDTSSFMSAEDAALMIHGALAN  209 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCE
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHH---------HhcCC---------CCCcccCCCHHHHHHHHHHHHhC
Confidence            99887753       3489999999998876621         11000         01134678899999999998875


Q ss_pred             Cc
Q 023078          206 EK  207 (287)
Q Consensus       206 ~~  207 (287)
                      +.
T Consensus       210 ~~  211 (230)
T 3guy_A          210 IG  211 (230)
T ss_dssp             ET
T ss_pred             cC
Confidence            43

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.52  E-value=4.6e-14  Score=116.12  Aligned_cols=189  Identities=17%  Similarity=0.212  Sum_probs=123.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC---chhhhhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+ +....   ...+.....++.++.+|++|.+++.++++..     +
T Consensus        15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   93 (285)
T 3sc4_A           15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPK-LPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGG   93 (285)
T ss_dssp             ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhh-hhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998765221 11111   1122233467899999999998888877643     7


Q ss_pred             ccEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +|++||+||....                    +...+.++    ++  +..++|++||...+...          ..+.
T Consensus        94 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  163 (285)
T 3sc4_A           94 IDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----------WLRP  163 (285)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----------GSCS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----------CCCC
Confidence            9999999996321                    22233333    33  45799999997643211          0112


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|...+.+.+       ..++++..++||.+...    .    +.........        ....+...+|+|++
T Consensus       164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t----~----~~~~~~~~~~--------~~~r~~~pedvA~~  227 (285)
T 3sc4_A          164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT----A----AVQNLLGGDE--------AMARSRKPEVYADA  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC----H----HHHHHHTSCC--------CCTTCBCTHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc----H----HHHhhccccc--------cccCCCCHHHHHHH
Confidence            346 99998887753       36899999999843222    1    1222222111        11235678999999


Q ss_pred             HHHHhcCCc-CCCceEEee
Q 023078          199 FVQVLGNEK-ASRQVFNIS  216 (287)
Q Consensus       199 ~~~~~~~~~-~~~~~~~~~  216 (287)
                      ++.++.... ..|+.+.+.
T Consensus       228 ~~~l~s~~~~~tG~~i~~d  246 (285)
T 3sc4_A          228 AYVVLNKPSSYTGNTLLCE  246 (285)
T ss_dssp             HHHHHTSCTTCCSCEEEHH
T ss_pred             HHHHhCCcccccceEEEEc
Confidence            999997653 244444443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.52  E-value=1.7e-13  Score=111.72  Aligned_cols=197  Identities=16%  Similarity=0.120  Sum_probs=131.4

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+  |.||.++++.|+++|++|++++|+........    ..++ .....++.++.+|++|.+++.++++..     .
T Consensus        26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEEN----VKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHH----HHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHH----HHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999  89999999999999999999998865421111    0111 122457889999999999888877643     6


Q ss_pred             ccEEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +|++||+||....                    +..++.+++    +  +..++|++||...+...         ...+.
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  172 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------FPQEQ  172 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------SSSCC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------CCCCC
Confidence            8999999986321                    233344443    2  56799999997643111         01123


Q ss_pred             ccc-cchHHHHHHHH----hc--CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~----~~--~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      ..| .+|...+.+.+    +.  .+++..+.||.+..+... ..............+         ...+.+++|+|+++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~---------~~r~~~~~dva~~~  242 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-FVPKETQQLWHSMIP---------MGRDGLAKELKGAY  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-GSCHHHHHHHHTTST---------TSSCEETHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-hCCHHHHHHHHhcCC---------CCCCcCHHHHHhHh
Confidence            346 99999887763    22  378999999998776421 112222223332221         23467899999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCCc
Q 023078          200 VQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      +.++...  ...|+.+++.+|..
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGG
T ss_pred             heeecCccccccCCEEEECCcee
Confidence            9998753  23689999988754

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.52  E-value=5.7e-13  Score=105.74  Aligned_cols=188  Identities=15%  Similarity=0.163  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++-||+.+++.|+++|++|++.+|+.+......           ..++..+.+|++|++++.+++++. ++|++||+
T Consensus        17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A           17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999999999999876643222           357888999999999988888764 69999999


Q ss_pred             cCCCcc------------------chHHH----HHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHH
Q 023078           80 NGREAD------------------EVEPI----LDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        80 a~~~~~------------------~~~~l----~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~  135 (287)
                      ||....                  +...+    +..++ +-.++|.+||......           ......| .+|...
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-----------~~~~~~Y~asKaav  154 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG-----------SADRPAYSASKGAI  154 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC-----------CSSCHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC-----------CCCCHHHHHHHHHH
Confidence            997421                  12222    22232 3468999999764211           1112246 899988


Q ss_pred             HHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          136 ESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       136 E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      ..+.+       .+|+++..+.||.+..|..... ..+...+.+.+..|+.         -+-.++|+|++++.++....
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchh
Confidence            77643       4689999999999877632111 1122333444443331         23458999999999886533


Q ss_pred             --CCCceEEeeCCC
Q 023078          208 --ASRQVFNISGEK  219 (287)
Q Consensus       208 --~~~~~~~~~~~~  219 (287)
                        -+|+.+.+.+|-
T Consensus       226 ~~iTG~~l~VDGG~  239 (242)
T 4b79_A          226 SFVTGAVLAVDGGY  239 (242)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             cCccCceEEECccH
Confidence              378899988763

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.52  E-value=4.3e-14  Score=114.03  Aligned_cols=173  Identities=16%  Similarity=0.189  Sum_probs=116.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh---hcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..     ..+..   ...++.++.+|++|.+++.++++..     .
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A           13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVH-----DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHH-----HHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999876532211     01111   1257889999999998888777642     6


Q ss_pred             ccEEEEccCCCcc-------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           73 FDVVYDINGREAD-------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        73 ~d~vi~~a~~~~~-------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +|++||+||....                   +...+.+++    +  +..++|++||...+..           ..+..
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------FADGG  156 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCTT
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------CCCCc
Confidence            9999999987321                   122333332    2  5679999999875421           11233


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       ..++++..++||.+..+         +.....  ..       .....+++++|+|+++
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------~~~~~~--~~-------~~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------MAKKAG--TP-------FKDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------HHHHTT--CC-------SCGGGSBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------hhhhcC--CC-------cccccCCCHHHHHHHH
Confidence            46 99998887653       35899999999988655         111111  11       1123478999999999


Q ss_pred             HHHhcCCc
Q 023078          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +.++..+.
T Consensus       219 ~~l~s~~~  226 (250)
T 3nyw_A          219 RCLLNLSE  226 (250)
T ss_dssp             HHHHTSCT
T ss_pred             HHHHcCCC
Confidence            99998654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.51  E-value=8.3e-14  Score=114.93  Aligned_cols=194  Identities=11%  Similarity=0.043  Sum_probs=128.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEe-cCCccccccCCCCCchhhh-hhcCCcEEEEecCCChH----------------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~----------------   62 (287)
                      |||+|.||+++++.|+++|++|++++ |+.....+..     ..+. ....++.++.+|+++.+                
T Consensus        15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-----HHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            89999999999999999999999999 8765422111     1111 11357889999999988                


Q ss_pred             -HHHhhhccC-----CccEEEEccCCCcc----------------------------------chHHHHHh----CC--C
Q 023078           63 -FVKSSLSAK-----GFDVVYDINGREAD----------------------------------EVEPILDA----LP--N   96 (287)
Q Consensus        63 -~~~~~~~~~-----~~d~vi~~a~~~~~----------------------------------~~~~l~~a----~~--~   96 (287)
                       ++.++++..     .+|++||+||....                                  +...++++    +.  +
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~  169 (291)
T 1e7w_A           90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  169 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence             887777642     79999999986321                                  11122233    22  3


Q ss_pred             ------CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc
Q 023078           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (287)
Q Consensus        97 ------~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~  162 (287)
                            ..++|++||...+..           ......| .+|...+.+.+       ..+++++.++||.+..+. .  
T Consensus       170 ~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--  235 (291)
T 1e7w_A          170 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--  235 (291)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--
T ss_pred             CCCCCCCcEEEEEechhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--
Confidence                  578999999765321           1122346 89998887653       358999999999987663 1  


Q ss_pred             hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      +.+.....+....++   +     .-+..++|+|++++.++...  ...|+.+++.+|..+
T Consensus       236 ~~~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          236 MPPAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             SCHHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            112222333322211   1     02567999999999998753  236888999887543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.51  E-value=7.3e-15  Score=120.66  Aligned_cols=192  Identities=15%  Similarity=0.138  Sum_probs=126.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++++|+.....+..        .....++.++.+|+++.+++.++++..     .+|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A           11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH--------HHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999866532111        112457889999999998887777642     7899


Q ss_pred             EEEccCCCcc-------------------------chHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD-------------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +||+||....                         +...+.+++    . ...++|++||...+..           ...
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  151 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----------NGG  151 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----------SSS
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----------CCC
Confidence            9999986310                         122233332    2 3368999999765311           112


Q ss_pred             Cccc-cchHHHHHHHH----h--cCCcEEEEccCceecCCCCCch---hH------HHHHHHHcCCCcccCCCCCceeee
Q 023078          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPV---EE------WFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      ...| .+|...+.+.+    +  .++++..+.||.+..+......   ..      .....+....++         ..+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  222 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---------GRM  222 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---------SSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---------CCC
Confidence            2346 99999887763    1  2499999999999876321100   00      011122222111         235


Q ss_pred             eeHHHHHHHHHHHhcC-Cc--CCCceEEeeCCCc
Q 023078          190 GHVKDLARAFVQVLGN-EK--ASRQVFNISGEKY  220 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~-~~--~~~~~~~~~~~~~  220 (287)
                      ..++|+|++++.++.. ..  -.|+.+++.+|..
T Consensus       223 ~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          223 PALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             CCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             CCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            6789999999999873 22  3789999988854

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.50  E-value=3.9e-14  Score=116.67  Aligned_cols=173  Identities=15%  Similarity=0.104  Sum_probs=116.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhc-CCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+..+.....     ..+.... .++.++.+|++|.+++.++++..     ++|
T Consensus        34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999866532111     0111111 36889999999998888777532     799


Q ss_pred             EEEEc-cCCCc-------------------cchHHHHHhC----C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           75 VVYDI-NGREA-------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        75 ~vi~~-a~~~~-------------------~~~~~l~~a~----~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      ++||+ ++...                   .+..++++++    + +..++|++||...+..           ..+...|
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  177 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------YPMVAAY  177 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------CTTCHHH
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----------CCCccHH
Confidence            99999 55421                   1222333332    2 3469999999865321           1123346


Q ss_pred             -cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                       .+|...+.+.+         ..++++++++||.+..+.         ......+         .....+++++|+|+.+
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---------AMKAVSG---------IVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---------HHHHSCG---------GGGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---------HHHhccc---------cccCCCCCHHHHHHHH
Confidence             89998887652         248999999999886551         1111110         1123568899999999


Q ss_pred             HHHhcCCc
Q 023078          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +..++.+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99988654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.49  E-value=2.7e-14  Score=115.53  Aligned_cols=192  Identities=16%  Similarity=0.124  Sum_probs=118.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhh-cc-CCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SA-KGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~-~~~d~vi~   78 (287)
                      |||+|+||+++++.|+++|++|++++|+.++... +     ..+.....++..+  |..+.+.+.+.+ +. -++|++||
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~-----~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-L-----EAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-H-----HHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-----HHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            8999999999999999999999999998654221 1     0111112233333  444433222211 11 17999999


Q ss_pred             ccCCC-cc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           79 INGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        79 ~a~~~-~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||.. ..                    +..++.++    ++  +..++|++||...+..           ..+...| .
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~  147 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------WKELSTYTS  147 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------CTTCHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------CCCchHHHH
Confidence            99865 21                    12233333    22  5679999999765321           1122346 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHH-------HHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-------FHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      +|...+.+.+       ..+++++.++||.++|+.........+       ...+....+         ...+.+++|+|
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---------~~~~~~p~dvA  218 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---------LQRLGTQKELG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---------SSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---------CCCCcCHHHHH
Confidence            9999887653       358999999999998875322111111       111111111         11367899999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++++.++....  ..|+.+++.++..
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcccCCccCCEEEECCCch
Confidence            99999987643  3688999988753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.49  E-value=3.5e-13  Score=107.62  Aligned_cols=185  Identities=17%  Similarity=0.175  Sum_probs=126.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+..         +...++..+.+|++|++++.++++.     -++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~---------~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA---------KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---------TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876533221         1245788899999999888777653     27999


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-ccc
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~~~  129 (287)
                      +||+||....                    +...    ++..+. +..++|.+||...+.            ..|. ..|
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~------------~~~~~~~Y  146 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ------------SEPDSEAY  146 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS------------CCTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc------------CCCCCHHH
Confidence            9999987422                    1222    222333 447899999976521            1122 236


Q ss_pred             -cchHHHHHHHH------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 -~~k~~~E~~~~------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                       .+|.....+.+      ..++++..+.||.+-.+... .    +.+...+..++.         -+...+|+|++++.+
T Consensus       147 ~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-~----~~~~~~~~~Pl~---------R~g~pediA~~v~fL  212 (247)
T 3ged_A          147 ASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-E----FTQEDCAAIPAG---------KVGTPKDISNMVLFL  212 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTTS---------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-H----HHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence             88988776643      24899999999988655321 1    112222222221         135689999999999


Q ss_pred             hcCCcCCCceEEeeCCCc
Q 023078          203 LGNEKASRQVFNISGEKY  220 (287)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~  220 (287)
                      +...--+|+.+.+.+|-.
T Consensus       213 ~s~~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          213 CQQDFITGETIIVDGGMS  230 (247)
T ss_dssp             HHCSSCCSCEEEESTTGG
T ss_pred             HhCCCCCCCeEEECcCHH
Confidence            976555789999988743

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.48  E-value=1.5e-13  Score=120.97  Aligned_cols=196  Identities=16%  Similarity=0.116  Sum_probs=128.7

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~   75 (287)
                      |||+|+||.++++.|+++|++ |++++|+...... .. ....++.....++.++.+|++|.+++.++++..    .+|.
T Consensus       232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~  309 (486)
T 2fr1_A          232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-AG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA  309 (486)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999985 9999998643110 00 001122333457889999999999999988743    4699


Q ss_pred             EEEccCCCc--------------------cchHHHHHhCC--CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCccc-cc
Q 023078           76 VYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a~~--~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      |||++|...                    .++.++.+++.  +..+||++||... +|..            ....| .+
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------g~~~Yaaa  377 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------GLGGYAPG  377 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------TCTTTHHH
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC------------CCHHHHHH
Confidence            999998632                    23566777766  6789999999764 3321            11235 78


Q ss_pred             hHHHHHHH---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          132 KLNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       132 k~~~E~~~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      |...+.+.   +..++++++++||.+.+++.....        .. ..+   .  .....+++.+|+++++..++..+..
T Consensus       378 ka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~--------~~-~~~---~--~~g~~~i~~e~~a~~l~~~l~~~~~  443 (486)
T 2fr1_A          378 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP--------VA-DRF---R--RHGVIEMPPETACRALQNALDRAEV  443 (486)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECCBC---------------------C---T--TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchh--------HH-HHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC
Confidence            88877665   457999999999998776421100        00 001   1  1225789999999999999987542


Q ss_pred             CCceEEeeCCCcccHHHHHHHH
Q 023078          209 SRQVFNISGEKYVTFDGLARAC  230 (287)
Q Consensus       209 ~~~~~~~~~~~~~s~~~i~~~i  230 (287)
                         .+.+.   .+.+..+...+
T Consensus       444 ---~~~v~---~~d~~~~~~~~  459 (486)
T 2fr1_A          444 ---CPIVI---DVRWDRFLLAY  459 (486)
T ss_dssp             ---SCEEC---EECHHHHHHHH
T ss_pred             ---eEEEE---eCCHHHHhhhh
Confidence               23332   25566665543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.48  E-value=1e-13  Score=112.57  Aligned_cols=184  Identities=16%  Similarity=0.084  Sum_probs=114.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |||+|+||+++++.|+++|++|++++|+.....+..     ..+.....++.++.+|++|.+++.++++.      -.+|
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A           11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-----QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            899999999999999999999999999865422111     11122234678899999999888777652      2579


Q ss_pred             EEEEccCC--C-------------------------ccch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           75 VVYDINGR--E-------------------------ADEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        75 ~vi~~a~~--~-------------------------~~~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                      ++||+||.  .                         ..+.    +.++..+.  +..++|++||...+.           
T Consensus        86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  154 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ-----------  154 (260)
T ss_dssp             EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS-----------
T ss_pred             EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC-----------
Confidence            99999942  1                         0012    22233332  567999999986532           


Q ss_pred             CCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                       ..+...| .+|...+.+.+       ..+++++.++||.+..+.........   .............  ....+...+
T Consensus       155 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~pe  228 (260)
T 2qq5_A          155 -YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKS--AFSSAETTE  228 (260)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHh--hhccCCCHH
Confidence             1123456 99999888753       35899999999999877421110000   0000000000000  001135789


Q ss_pred             HHHHHHHHHhcCC
Q 023078          194 DLARAFVQVLGNE  206 (287)
Q Consensus       194 Dva~~~~~~~~~~  206 (287)
                      |+|++++.++..+
T Consensus       229 ~va~~v~~l~s~~  241 (260)
T 2qq5_A          229 LSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHTCT
T ss_pred             HHHHHHHHHhcCc
Confidence            9999999998764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.47  E-value=1.8e-13  Score=115.40  Aligned_cols=189  Identities=15%  Similarity=0.127  Sum_probs=124.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC---chhhhhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+ +....   ...+.....++.++.+|++|++++.++++..     +
T Consensus        51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~-l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  129 (346)
T 3kvo_A           51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPK-LLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGG  129 (346)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhh-hHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998765322 11111   1122233457888999999999888887643     7


Q ss_pred             ccEEEEccCCCc--------------------cchHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +|++||+||...                    .+..++.+++    +  +..++|++||...+...         ...+.
T Consensus       130 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---------~~~~~  200 (346)
T 3kvo_A          130 IDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---------WFKQH  200 (346)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------GTSSS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------CCCCc
Confidence            999999998632                    2233444443    3  56799999998754221         01123


Q ss_pred             ccc-cchHHHHHHHH----h--cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~----~--~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      ..| .+|...+.+.+    +  .++++..+.||.+....        +...+....         ....+..++|+|+++
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------~~~~~~~~~---------~~~r~~~pedvA~~v  263 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------AMDMLGGPG---------IESQCRKVDIIADAA  263 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------HHHHHCC-----------CGGGCBCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------HHHhhcccc---------ccccCCCHHHHHHHH
Confidence            346 99998887653    2  57999999999633321        112211111         122356789999999


Q ss_pred             HHHhcCCc-CCCceEEeeC
Q 023078          200 VQVLGNEK-ASRQVFNISG  217 (287)
Q Consensus       200 ~~~~~~~~-~~~~~~~~~~  217 (287)
                      +.++.... ..|+.+ +.+
T Consensus       264 ~~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          264 YSIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHHTSCTTCCSCEE-EHH
T ss_pred             HHHHhcCCCCCceEE-ECC
Confidence            99998732 255544 443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.46  E-value=2.6e-13  Score=110.98  Aligned_cols=185  Identities=18%  Similarity=0.175  Sum_probs=119.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC---chhhhhhcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||+|.||+++++.|+++|++|++++|+..+..+ +....   .........++.++.+|++|.+++.++++..     +
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   90 (274)
T 3e03_A           12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPK-LPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGG   90 (274)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTT-SCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhh-hHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998765222 11111   1112223457889999999998888877642     7


Q ss_pred             ccEEEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        73 ~d~vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +|++||+||...                    .+...+.++    ++  +..++|++||...+....         ..+.
T Consensus        91 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~~  161 (274)
T 3e03_A           91 IDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---------WGAH  161 (274)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---------HHHC
T ss_pred             CCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------CCCC
Confidence            999999998632                    122233333    33  567999999976532100         0112


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      ..| .+|...+.+.+       ..++++..++||.+....    +.    .. ....         ....+..++|+|++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~----~~----~~-~~~~---------~~~~~~~pedvA~~  223 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD----AI----NM-LPGV---------DAAACRRPEIMADA  223 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CC---------CGGGSBCTHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc----hh----hh-cccc---------cccccCCHHHHHHH
Confidence            236 99998887653       358999999999543321    10    11 1111         11226689999999


Q ss_pred             HHHHhcCCcC--CCceE
Q 023078          199 FVQVLGNEKA--SRQVF  213 (287)
Q Consensus       199 ~~~~~~~~~~--~~~~~  213 (287)
                      ++.++.....  .|+.+
T Consensus       224 v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          224 AHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHTSCCTTCCSCEE
T ss_pred             HHHHhCccccccCCeEE
Confidence            9999876432  45555

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.46  E-value=1.6e-13  Score=110.49  Aligned_cols=181  Identities=15%  Similarity=0.115  Sum_probs=118.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecC--CChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~--~~~~~~~~~~~~~-----~   72 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+..     ..+... ..+..++.+|+  ++.+++.++++..     +
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~   94 (247)
T 3i1j_A           20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVS-----DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR   94 (247)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHH-----HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999876532111     111111 24677788887  8887777766532     7


Q ss_pred             ccEEEEccCCCc---------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        73 ~d~vi~~a~~~~---------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +|++||+||...                     .+...++++    ++  +..++|++||...+..           ..+
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  163 (247)
T 3i1j_A           95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG-----------RAN  163 (247)
T ss_dssp             CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC-----------CCC
Confidence            999999998631                     123333343    23  5679999999765321           112


Q ss_pred             Cccc-cchHHHHHHHH-------h-cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~-~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       . .++++..++||.+..+         +.......         .....+...+|+|
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~---------~~~~~~~~p~dva  225 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG---------MRAQAYPD---------ENPLNNPAPEDIM  225 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------HHHHHSTT---------SCGGGSCCGGGGT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------cchhcccc---------cCccCCCCHHHHH
Confidence            3346 89999887753       2 5789999999987554         11111111         1112356789999


Q ss_pred             HHHHHHhcCCc--CCCceEEe
Q 023078          197 RAFVQVLGNEK--ASRQVFNI  215 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~  215 (287)
                      ++++.++....  ..|+.+++
T Consensus       226 ~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          226 PVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHhCchhccccCeeecC
Confidence            99999986532  25666554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.45  E-value=4.1e-13  Score=118.63  Aligned_cols=198  Identities=18%  Similarity=0.174  Sum_probs=132.0

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |||+|+||.++++.|.++|+ +|++++|+...... .. ....++.....++.++.+|++|.+++.++++...+|+|||+
T Consensus       265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~-~~-~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~  342 (511)
T 2z5l_A          265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG-AA-ELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT  342 (511)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-HH-HHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH-HH-HHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence            79999999999999999998 68899998643110 00 00112222245688999999999999999984459999999


Q ss_pred             cCCCc--------------------cchHHHHHhCC---CCCcEEEEeeeeE-eecCCCCCCCCCCCCCCCccc-cchHH
Q 023078           80 NGREA--------------------DEVEPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KGKLN  134 (287)
Q Consensus        80 a~~~~--------------------~~~~~l~~a~~---~~~~~i~~Ss~~~-y~~~~~~~~~e~~~~~p~~~~-~~k~~  134 (287)
                      +|...                    .++.++.+++.   +..+||++||... +|..            ....| .+|..
T Consensus       343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~------------g~~~YaaaKa~  410 (511)
T 2z5l_A          343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA------------GQGAYAAANAA  410 (511)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT------------TBHHHHHHHHH
T ss_pred             CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC------------CCHHHHHHHHH
Confidence            98632                    23455677765   5679999999753 3221            12346 88998


Q ss_pred             HHHHHH---hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          135 TESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       135 ~E~~~~---~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                      .+.+.+   ..++++++++||.+-+.+......   ...+..           .....++.+|+++++..++..+..   
T Consensus       411 ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~---~~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---  473 (511)
T 2z5l_A          411 LDALAERRRAAGLPATSVAWGLWGGGGMAAGAG---EESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---  473 (511)
T ss_dssp             HHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH---HHHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---
T ss_pred             HHHHHHHHHHcCCcEEEEECCcccCCccccccc---HHHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---
Confidence            888764   579999999999874333222211   111111           113568899999999999986542   


Q ss_pred             eEEeeCCCcccHHHHHHHHHH
Q 023078          212 VFNISGEKYVTFDGLARACAK  232 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~  232 (287)
                      .+.+.   .+.+..+...+..
T Consensus       474 ~v~v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          474 CVTVV---DVDWERFAPATNA  491 (511)
T ss_dssp             EEEEC---CBCHHHHHHHHHH
T ss_pred             EEEEE---eCCHHHHHhhhcc
Confidence            23333   2557666665543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.43  E-value=2.4e-12  Score=103.25  Aligned_cols=196  Identities=13%  Similarity=0.125  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+.+++.|+++|.+|++.+|+++...+..     .++.....++..+.+|++|++++.++++..     ++|+
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-----~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A           13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-----QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532211     223333567889999999998888776532     7999


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                     +    .+.++..++  +..++|++||......           ......
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~-----------~~~~~~  156 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG-----------GFAGAP  156 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS-----------SSSCHH
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC-----------CCCChH
Confidence            9999985311                     1    222333333  5678999999764211           111223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|.....+.+       .+|+++..+.||.+-.|......  .....+......  ...+      -+..++|+|.+
T Consensus       157 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~~------R~g~pediA~~  228 (254)
T 4fn4_A          157 YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM--SLSS------RLAEPEDIANV  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHH--TTCC------CCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcC--CCCC------CCcCHHHHHHH
Confidence            6 88998876643       46899999999998766321111  111111111111  0001      23458999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++.++....  -+|+.+.+.+|-.
T Consensus       229 v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          229 IVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCCEEEeCCCcc
Confidence            999986543  3788999987743

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.41  E-value=3.2e-12  Score=104.18  Aligned_cols=193  Identities=16%  Similarity=0.092  Sum_probs=123.7

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-------
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-------   71 (287)
                      |||  +|.||+++++.|+++|++|++++|+..+..+.+.       .+...++.++.+|++|++++.++++..       
T Consensus        13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH-------HhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            788  9999999999999999999999998754211111       011246788999999999888887642       


Q ss_pred             -CccEEEEccCCCcc-------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCC
Q 023078           72 -GFDVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETD  121 (287)
Q Consensus        72 -~~d~vi~~a~~~~~-------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~  121 (287)
                       ++|++||+||....                         +...+.+++.    ...++|++||...++           
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------  154 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-----------  154 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------
Confidence             79999999986430                         1223344432    225899999864321           


Q ss_pred             CCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc----hhHH-------HHHHHHcCCCcccCCC
Q 023078          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----VEEW-------FFHRLKAGRPIPIPGS  182 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~----~~~~-------~~~~~~~~~~~~~~~~  182 (287)
                       ......| .+|...+.+.+       ..+++++.++||.+..+.....    ....       +...+....+.   + 
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-  229 (269)
T 2h7i_A          155 -MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-  229 (269)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-
T ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c-
Confidence             1122346 89998887653       3589999999998865410000    0000       01111111111   1 


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       183 ~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                          +.+..++|+|++++.++....  ..|+.+++.+|..
T Consensus       230 ----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          230 ----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             ----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             ----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence                124567999999999997532  3688899887743

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.41  E-value=5.1e-13  Score=107.19  Aligned_cols=194  Identities=14%  Similarity=0.140  Sum_probs=128.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+.+++.|+++|++|++.+|+.+...+..     .++.....++..+.+|++|++++.++++..     ++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-----~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-----DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-----HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            899999999999999999999999999876532221     222333457888999999998887776532     6999


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +.    +.++..+.   +..++|.+||.......           .....
T Consensus        90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~-----------~~~~~  158 (255)
T 4g81_D           90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR-----------PTVAP  158 (255)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC-----------CCchh
Confidence            9999997422                    12    22333332   44689999998653111           11223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|.....+.+       .+|+++..+.||.+..+...... .+.+...+.+..++.         -+..++|+|.++
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pediA~~v  229 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ---------RWGRPEELIGTA  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC---------SCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC---------CCcCHHHHHHHH
Confidence            6 88998877653       46899999999998766311000 011222233322221         134578999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +.++....  -+|+.+.+.+|-
T Consensus       230 ~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          230 IFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCCEEEECCCe
Confidence            99886533  378899988773

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.40  E-value=2.3e-12  Score=107.19  Aligned_cols=187  Identities=15%  Similarity=0.107  Sum_probs=118.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCCh-HHHHhhhcc-----CCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDY-DFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~~~-----~~~   73 (287)
                      |||+|+||+++++.|+++|++|++++|+..+..+...     ++.. ...++.++.+|+++. +.+..+++.     -++
T Consensus        18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i   92 (311)
T 3o26_A           18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE-----KLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL   92 (311)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence            8999999999999999999999999998765322111     1111 124789999999997 766666542     279


Q ss_pred             cEEEEccCCCc--------------------------------------------------cchHH----HHHhCC--CC
Q 023078           74 DVVYDINGREA--------------------------------------------------DEVEP----ILDALP--NL   97 (287)
Q Consensus        74 d~vi~~a~~~~--------------------------------------------------~~~~~----l~~a~~--~~   97 (287)
                      |++||+||...                                                  .+...    ++..++  +.
T Consensus        93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~  172 (311)
T 3o26_A           93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS  172 (311)
T ss_dssp             CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence            99999999641                                                  11222    333333  56


Q ss_pred             CcEEEEeeeeEeecCCC--------------------------------CCCCCCCCCCCCccc-cchHHHHHHHH----
Q 023078           98 EQFIYCSSAGVYLKSDL--------------------------------LPHCETDTVDPKSRH-KGKLNTESVLE----  140 (287)
Q Consensus        98 ~~~i~~Ss~~~y~~~~~--------------------------------~~~~e~~~~~p~~~~-~~k~~~E~~~~----  140 (287)
                      .++|++||...+.....                                ..........+...| .+|...+.+.+    
T Consensus       173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  252 (311)
T 3o26_A          173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN  252 (311)
T ss_dssp             CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence            79999999765422100                                000011111222346 99999988763    


Q ss_pred             h-cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC-CCceEEeeC
Q 023078          141 S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SRQVFNISG  217 (287)
Q Consensus       141 ~-~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~~~~~~~~~  217 (287)
                      + .+++++.+.||.+..+...             +            ......++.++.++.++..+.. .+..|...+
T Consensus       253 e~~~i~v~~v~PG~v~T~~~~-------------~------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          253 KIPKFQVNCVCPGLVKTEMNY-------------G------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             HCTTSEEEEECCCSBCSGGGT-------------T------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             hcCCceEEEecCCceecCCcC-------------C------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence            2 3689999999988665210             0            0124678999999888775432 333444443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.39  E-value=5.6e-12  Score=100.26  Aligned_cols=192  Identities=18%  Similarity=0.152  Sum_probs=129.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||++-||+.+++.|.++|.+|++.+|+.....       .....+...++..+.+|++|++++.++++.-++|++||+|
T Consensus        15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~-------~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A           15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDET-------LDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHH-------HHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            899999999999999999999999999754310       1122333567889999999999998888877899999999


Q ss_pred             CCCcc--------------------ch----HHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           81 GREAD--------------------EV----EPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        81 ~~~~~--------------------~~----~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      |....                    +.    +.++..+.  + ..++|.+||.......           .....| .+|
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-----------~~~~~Y~asK  156 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-----------IRVPSYTAAK  156 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------SSCHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-----------CCChHHHHHH
Confidence            97422                    12    22233332  3 4689999997642111           112236 899


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      .....+.+       .+|+++..+.||.+-.|...... .....+.+.+..|+.         -+-..+|+|.+++.++.
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaS  227 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG---------RWGHSEDIAGAAVFLSS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS---------SCBCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhC
Confidence            98876643       46899999999998665210000 011223333333321         13457999999999886


Q ss_pred             CCc--CCCceEEeeCCC
Q 023078          205 NEK--ASRQVFNISGEK  219 (287)
Q Consensus       205 ~~~--~~~~~~~~~~~~  219 (287)
                      ...  -.|+.+.+.+|-
T Consensus       228 d~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          228 AAADYVHGAILNVDGGW  244 (247)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhcCCcCCeEEECccc
Confidence            543  378899988763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.39  E-value=3e-12  Score=103.71  Aligned_cols=190  Identities=17%  Similarity=0.207  Sum_probs=127.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+.+++.|+++|++|++.+|+.+...+.        ..+...++..+.+|++|++++.++++..     ++|+
T Consensus        35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~--------~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA--------IAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987653221        1223467888999999998887776542     6999


Q ss_pred             EEEccCCCcc--------------------chHHHHHhC----CCCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-
Q 023078           76 VYDINGREAD--------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~----~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-  129 (287)
                      +||+||....                    +...+.+++    +...++|.+||......            .| ...| 
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~------------~~~~~~Y~  174 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG------------TPAFSVYA  174 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC------------CTTCHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC------------CCCchHHH
Confidence            9999987321                    233333332    23457899998764211            12 2246 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-----c-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----P-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      .+|.....+.+       .+|+++..+.||.+-.+....     . ....+...+.+..|+.         -+..++|+|
T Consensus       175 asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA  245 (273)
T 4fgs_A          175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RVGRAEEVA  245 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            89998887653       468999999999987663111     0 0112333333333321         134589999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++....  -.|+.+.+.+|.
T Consensus       246 ~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          246 AAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhCchhcCccCCeEeECcCh
Confidence            99999986543  378899998774

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.39  E-value=1.3e-11  Score=99.74  Aligned_cols=194  Identities=10%  Similarity=0.079  Sum_probs=126.2

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhcc-----CC
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~-----~~   72 (287)
                      |||+|  -||..+++.|+++|++|++.+|+++...+..     ....+. ..++.++.+|+++++++.++++.     -+
T Consensus        12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (256)
T 4fs3_A           12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE-----KLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN   86 (256)
T ss_dssp             ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----HHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            78876  8999999999999999999999876522110     111121 34788999999999887776653     27


Q ss_pred             ccEEEEccCCCcc-------------c-----------hHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD-------------E-----------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~-------------~-----------~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +|++||++|....             .           ...+..+    +++..++|++||....-           ...
T Consensus        87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-----------~~~  155 (256)
T 4fs3_A           87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-----------AVQ  155 (256)
T ss_dssp             CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS-----------CCT
T ss_pred             CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc-----------Ccc
Confidence            9999999986311             0           0111111    22446899999976421           111


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ....| .+|...+.+.+       .+|+++..+.||.+-.+.... .-.+...+.+.+..|+.         -+...+|+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~peev  226 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK---------RNVDQVEV  226 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS---------SCCCHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC---------CCcCHHHH
Confidence            12336 89998877653       468999999999887653211 11233444444433331         13458999


Q ss_pred             HHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      |++++.++....  -+|+.+.+.+|-
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCH
Confidence            999999886533  378899988774

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.38  E-value=1.5e-11  Score=99.28  Aligned_cols=180  Identities=16%  Similarity=0.169  Sum_probs=120.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+....               ......+++|+++++++..+++.     -++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           17 TAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------LPEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             eccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            89999999999999999999999999975431               12344689999998887776653     16999


Q ss_pred             EEEccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +||++|....                      +    ++.++..++  +..++|++||....-.          .+....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----------~~~~~~  151 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----------LPESTT  151 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTTCH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----------CCCccH
Confidence            9999985211                      1    222333333  5678999999764210          011123


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHH------------------HHHHcCCCcccCC
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF------------------HRLKAGRPIPIPG  181 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~------------------~~~~~~~~~~~~~  181 (287)
                      +| .+|...+.+.+       .+|+++..+.||.+-.+.     ...+.                  .......|+    
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl----  222 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA-----SVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL----  222 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH-----HHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT----
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc-----hhhhhHHHHHhhccchhhHHHHHHHHhcCCCC----
Confidence            46 88998887653       468999999999885542     11111                  111111111    


Q ss_pred             CCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          182 SGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       182 ~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                           --+...+|+|++++.++....  -+|+.+.+.+|-
T Consensus       223 -----gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          223 -----GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence                 124568999999999886533  378899998774

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.36  E-value=6.5e-12  Score=100.86  Aligned_cols=188  Identities=14%  Similarity=0.145  Sum_probs=113.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEE-e--cCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHH-HhhhccC-CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSAK-GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~-~~d~   75 (287)
                      |||+|+||+++++.|+++|++|+++ +  |+.........        +. .+..+.  |..+.+.+ .++.+.. ++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~--------~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES--------EN-PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH--------HS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHH--------Hh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999 6  87654221110        00 122222  33333222 2222211 6999


Q ss_pred             EEEccCCCcc-----------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD-----------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (287)
Q Consensus        76 vi~~a~~~~~-----------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~  126 (287)
                      +||+||....                       +...+.++    ++  +..++|++||...+...           .+.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~  144 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----------AYN  144 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTC
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----------CCc
Confidence            9999986422                       12223333    22  56799999998754221           122


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC--Cchh-HHHHHHHHc-CCCcccCCCCCceeeeeeHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKA-GRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      ..| .+|...+.+.+       ..+++++.++||.+..+...  .... ......+.. ..+.         ..+...+|
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pe~  215 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL---------GRLGRPDE  215 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT---------CSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC---------CCCcCHHH
Confidence            346 89999887753       35899999999998776320  1100 011111111 1111         13568999


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +|++++.++....  ..|+.+.+.++.
T Consensus       216 vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          216 MGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHHcCccccCccCCEEEeCCCC
Confidence            9999999987643  367888887763

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.36  E-value=9.7e-13  Score=110.22  Aligned_cols=142  Identities=15%  Similarity=0.090  Sum_probs=100.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh------hcCCcEEEEecCCChHHHHhhhccC---
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAK---   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~---   71 (287)
                      |||+|+||+++++.|+++|++|+++.|+...... ..    .....      ...++.++.+|++|.+++.++++..   
T Consensus         8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT-QG----RLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG-TH----HHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHH-HH----HHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            8999999999999999999999998886544211 10    01111      1257889999999999999888742   


Q ss_pred             CccEEEEccCCCc--------------------cchHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 ~~d~vi~~a~~~~--------------------~~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      .+|++||+||...                    .++.+++++    ++  +..++|++||...+...           ..
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----------~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------PF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------TT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------CC
Confidence            4999999998632                    123334444    32  67899999998653211           11


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCC
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~  158 (287)
                      ...| .+|...+.+.+       ..+++++.++||.+..+.
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            2346 99999887753       368999999999998764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.34  E-value=1.7e-11  Score=98.76  Aligned_cols=194  Identities=18%  Similarity=0.163  Sum_probs=129.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+.+++.|+++|.+|++.+|+.+... .     .....+...++.++.+|++|++++.+++++     -++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A           13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGA-F-----LDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-H-----HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-H-----HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876521 1     122333456889999999999887777653     27999


Q ss_pred             EEEccCCCcc-------------------ch----HHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD-------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~----~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||....                   +.    +.++..++ +..++|.+||...+....           ....| .
T Consensus        87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~-----------~~~~Y~a  155 (258)
T 4gkb_A           87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG-----------NTSGYCA  155 (258)
T ss_dssp             EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS-----------SCHHHHH
T ss_pred             EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC-----------CchHHHH
Confidence            9999987321                   12    22223333 346899999987532111           12236 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      +|.....+.+       .+|+++..+.||.+-.|......     .......+....++   +     .-+..++|+|++
T Consensus       156 sKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~  227 (258)
T 4gkb_A          156 SKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADT  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHH
Confidence            8998887653       47899999999998776421110     01112222222221   1     124568999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCC
Q 023078          199 FVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++.++....  -+|+.+.+.+|.
T Consensus       228 v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          228 AVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhcCccCCeEEECCCc
Confidence            999886533  378999998875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.34  E-value=2.1e-12  Score=112.57  Aligned_cols=190  Identities=16%  Similarity=0.154  Sum_probs=122.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC------Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~------~~d   74 (287)
                      |||+|.||.++++.|+++|++|++++|+.....  +     ..... ..++.++.+|++|.+++.++++..      .+|
T Consensus       219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~--l-----~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          219 TGAARGIGATIAEVFARDGATVVAIDVDGAAED--L-----KRVAD-KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH--H-----HHHHH-HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH--H-----HHHHH-HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            899999999999999999999999998643210  0     00111 125678999999998888777532      399


Q ss_pred             EEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +|||+||....                    +..++.+++    .  +..+||++||...+....           ....
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------g~~~  359 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------GQTN  359 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------TCHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------CCHH
Confidence            99999997422                    233444442    2  557899999987532211           1234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       ..+++++.+.||.+..+.... .............+         ...+...+|+|+++.
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---------l~r~g~pedvA~~v~  429 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATREVGRRLNS---------LFQGGQPVDVAELIA  429 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh-cchhhHHHHHhhcc---------ccCCCCHHHHHHHHH
Confidence            6 88997776542       468999999999997763211 00000000011011         112457899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  .+|+.+++.++.
T Consensus       430 fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          430 YFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHCGGGTTCCSCEEEESSSB
T ss_pred             HHhCCccCCCCCcEEEECCcc
Confidence            9887532  378899998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.32  E-value=9.7e-13  Score=106.66  Aligned_cols=185  Identities=15%  Similarity=0.135  Sum_probs=116.2

Q ss_pred             CCcccchHHHHHHHHHH---CCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC----
Q 023078            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~----   71 (287)
                      |||+|.||+++++.|++   +|++|++++|+.+...+..     ..+...  ..++.++.+|++|++++.++++..    
T Consensus        12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A           12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            89999999999999999   8999999999865422111     111111  246788999999998888776532    


Q ss_pred             ---Ccc--EEEEccCCCc---------cc--------------hHHHHHh----CC-C---CCcEEEEeeeeEeecCCCC
Q 023078           72 ---GFD--VVYDINGREA---------DE--------------VEPILDA----LP-N---LEQFIYCSSAGVYLKSDLL  115 (287)
Q Consensus        72 ---~~d--~vi~~a~~~~---------~~--------------~~~l~~a----~~-~---~~~~i~~Ss~~~y~~~~~~  115 (287)
                         .+|  ++||+||...         ..              ..++.++    ++ .   ..++|++||...+..    
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC----
Confidence               457  9999998631         11              1222333    32 2   257999999876421    


Q ss_pred             CCCCCCCCCCCccc-cchHHHHHHHH----hc-CCcEEEEccCceecCCCCCchhHHHH---------HHHHcCCCcccC
Q 023078          116 PHCETDTVDPKSRH-KGKLNTESVLE----SK-GVNWTSLRPVYIYGPLNYNPVEEWFF---------HRLKAGRPIPIP  180 (287)
Q Consensus       116 ~~~e~~~~~p~~~~-~~k~~~E~~~~----~~-~~~~~ilr~~~v~g~~~~~~~~~~~~---------~~~~~~~~~~~~  180 (287)
                             ..+...| .+|...+.+.+    +. ++++..+.||.+-.+     +...+.         ..+...  .+  
T Consensus       163 -------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~-----~~~~~~~~~~~~~~~~~~~~~--~p--  226 (259)
T 1oaa_A          163 -------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND-----MQQLARETSKDPELRSKLQKL--KS--  226 (259)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH-----HHHHHHHHCSCHHHHHHHHHH--HH--
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc-----hHHHHhhccCChhHHHHHHHh--hh--
Confidence                   1123346 99999888764    22 488888999877544     111111         011100  00  


Q ss_pred             CCCCceeeeeeHHHHHHHHHHHhcCCc-CCCceEEe
Q 023078          181 GSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNI  215 (287)
Q Consensus       181 ~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~~~~  215 (287)
                           ...+.+++|+|++++.++.... ..|+.+++
T Consensus       227 -----~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          227 -----DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             -----TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             -----cCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence                 1235789999999999886422 24555544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.30  E-value=1.4e-13  Score=115.34  Aligned_cols=145  Identities=12%  Similarity=0.122  Sum_probs=95.6

Q ss_pred             CCcccchHHHHHHHHHHCCC-------eEEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCC
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   72 (287)
                      |||+||||++++..|+++|+       +|+++++.+.. .....    ..++.  ...+.++ +|+.+.+.+.++++  +
T Consensus        10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~----~~dl~--~~~~~~~-~di~~~~~~~~a~~--~   80 (327)
T 1y7t_A           10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGV----VMELE--DCAFPLL-AGLEATDDPKVAFK--D   80 (327)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH----HHHHH--TTTCTTE-EEEEEESCHHHHTT--T
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccch----hhhhh--ccccccc-CCeEeccChHHHhC--C
Confidence            79999999999999999886       89999886421 00000    00111  1112233 57766666777887  9


Q ss_pred             ccEEEEccCCC--------------ccchHHHHHhCC--C-CC-cEEEEeeee-EeecCCCCCCC-CCC-CCCCCccc-c
Q 023078           73 FDVVYDINGRE--------------ADEVEPILDALP--N-LE-QFIYCSSAG-VYLKSDLLPHC-ETD-TVDPKSRH-K  130 (287)
Q Consensus        73 ~d~vi~~a~~~--------------~~~~~~l~~a~~--~-~~-~~i~~Ss~~-~y~~~~~~~~~-e~~-~~~p~~~~-~  130 (287)
                      +|+|||+|+..              ...+.+++++++  + .+ +++++|+.. +..     +.. +.. ...|...| .
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~~~yg~  155 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPRNFTAM  155 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGGGEEEC
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChhheecc
Confidence            99999999863              234677888876  4 44 677766542 000     011 111 23455567 8


Q ss_pred             chHHHHHHH----HhcCCcEEEEccCceecCCC
Q 023078          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (287)
Q Consensus       131 ~k~~~E~~~----~~~~~~~~ilr~~~v~g~~~  159 (287)
                      +|...|++.    +..+++.+++|++++|||.+
T Consensus       156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            999999875    34689999999999999865

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.24  E-value=2.4e-11  Score=101.30  Aligned_cols=178  Identities=13%  Similarity=0.110  Sum_probs=112.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCC---------ccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---------APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-   70 (287)
                      |||+|+||+++++.|+++|++|++.+|..         .+....     ..++..  .+. ...+|+.+.+++.++++. 
T Consensus        15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~-----~~~l~~--~~~-~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A           15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV-----VEEIRR--RGG-KAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHH-----HHHHHH--TTC-EEEEECCCGGGHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHH-----HHHHHh--hCC-eEEEeCCCHHHHHHHHHHH
Confidence            89999999999999999999999986632         221100     011111  111 235799988766555432 


Q ss_pred             ----CCccEEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeE-eecCCCCCCCC
Q 023078           71 ----KGFDVVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCE  119 (287)
Q Consensus        71 ----~~~d~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~-y~~~~~~~~~e  119 (287)
                          -++|++||+||....                    +..++.++    ++  +..++|++||... ++..       
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-------  159 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-------  159 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-------
Confidence                169999999986321                    12223333    33  5689999999753 3211       


Q ss_pred             CCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeee
Q 023078          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       120 ~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                           +...| .+|...+.+.+       ..+++++.++||.+ .+.. ....+                  .....+++
T Consensus       160 -----~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-~~~~~------------------~~~~~~~~  214 (319)
T 1gz6_A          160 -----GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-ETVMP------------------EDLVEALK  214 (319)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-GGGSC------------------HHHHHHSC
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-cccCC------------------hhhhccCC
Confidence                 22346 99998887653       35899999999976 3311 00000                  01123467


Q ss_pred             HHHHHHHHHHHhcCCc-CCCceEEeeCC
Q 023078          192 VKDLARAFVQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~-~~~~~~~~~~~  218 (287)
                      ++|+|.+++.++..+. ..|+.|++.++
T Consensus       215 p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          215 PEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            8999999999887542 36778887665

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.22  E-value=2.4e-11  Score=106.64  Aligned_cols=181  Identities=18%  Similarity=0.148  Sum_probs=121.7

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~   75 (287)
                      |||+|.||.++++.|.++|+ +|++++|+...... . .....++.....++.++.+|++|.+++.++++..    .+|.
T Consensus       245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~-~-~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~  322 (496)
T 3mje_A          245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPG-A-AELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA  322 (496)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred             ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHH-H-HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999998 78888887433110 0 0011223333567899999999999999888742    5899


Q ss_pred             EEEccCCC-c--------------------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cc
Q 023078           76 VYDINGRE-A--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (287)
Q Consensus        76 vi~~a~~~-~--------------------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~  131 (287)
                      |||+||.. .                    .++.++.+++.  ...+||++||...+-+.           .....| .+
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~-----------~g~~~YaAa  391 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS-----------GGQPGYAAA  391 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC-----------TTCHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC-----------CCcHHHHHH
Confidence            99999874 1                    23556666655  67899999997643111           112236 88


Q ss_pred             hHHHHHHH---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          132 KLNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       132 k~~~E~~~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      |...+.+.   +..|++++.+.||.+.+++....  ......+.+.           -...+..++.++++..++..+.
T Consensus       392 Ka~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          392 NAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVRQ-----------GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHHT-----------TEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCCC
Confidence            88887765   45799999999998877643211  0011111111           1345788999999999887653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.15  E-value=5.4e-10  Score=92.29  Aligned_cols=199  Identities=9%  Similarity=-0.044  Sum_probs=114.6

Q ss_pred             CCcc--cchHHHHHHHHHHCCCeEEEEecCCcc-------ccccCCCCCchhhhhhc--CCcEEEEec--------CC--
Q 023078            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAP-------IAQQLPGESDQEFAEFS--SKILHLKGD--------RK--   59 (287)
Q Consensus         1 tGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~d--------~~--   59 (287)
                      |||+  |.||+++++.|+++|++|++++|++..       ....+..  ...+....  .....+.+|        +.  
T Consensus        14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~D   91 (297)
T 1d7o_A           14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ--SRVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG--GGBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh--hhhhccccccccccccccceeccchhhhhhh
Confidence            7998  999999999999999999999865210       0001100  00000000  001233333        22  


Q ss_pred             --C--------hHHHHhhhcc-----CCccEEEEccCCCc----------------------cchHHHHHhCC----CCC
Q 023078           60 --D--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (287)
Q Consensus        60 --~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~~a~~----~~~   98 (287)
                        |        ++++.++++.     -++|++||+||...                      .+...+++++.    ...
T Consensus        92 v~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g  171 (297)
T 1d7o_A           92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG  171 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCc
Confidence              1        3334443331     16999999997521                      12333444432    236


Q ss_pred             cEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH--------hcCCcEEEEccCceecCCCCCc-hhHHHH
Q 023078           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNP-VEEWFF  168 (287)
Q Consensus        99 ~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~--------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~  168 (287)
                      ++|++||...+...          +.....| .+|...+.+.+        ..+++++.++||.+.++..... ....+.
T Consensus       172 ~iv~isS~~~~~~~----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~  241 (297)
T 1d7o_A          172 ASISLTYIASERII----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             EEEEEECGGGTSCC----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             eEEEEeccccccCC----------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHH
Confidence            89999997643111          0111246 89998887652        2689999999999998853321 122222


Q ss_pred             HHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .......+.         ..+.+++|+|++++.++....  ..|+.+++.++..
T Consensus       242 ~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          242 EYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            222222211         134679999999999886532  3688999988753

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.10  E-value=1.4e-10  Score=102.81  Aligned_cols=198  Identities=14%  Similarity=0.064  Sum_probs=123.6

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEE-ecCCccc---------cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPI---------AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l-~r~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   69 (287)
                      |||+|.||.++++.|.++|++ |+++ +|+....         .+.. .....++.....++.++.+|++|.+++.++++
T Consensus       257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  335 (525)
T 3qp9_A          257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGL-AGLVAELADLGATATVVTCDLTDAEAAARLLA  335 (525)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------C-HHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHH-HHHHHHHHhcCCEEEEEECCCCCHHHHHHHHH
Confidence            899999999999999999987 5555 6764220         0000 00112233345678999999999999999887


Q ss_pred             cC----CccEEEEccCCCc--------------------cchHHHHHhCC------C-CCcEEEEeeeeEeecCCCCCCC
Q 023078           70 AK----GFDVVYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        70 ~~----~~d~vi~~a~~~~--------------------~~~~~l~~a~~------~-~~~~i~~Ss~~~y~~~~~~~~~  118 (287)
                      ..    .+|.|||+||...                    .++.++.+++.      + ..+||++||...+-+.      
T Consensus       336 ~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~------  409 (525)
T 3qp9_A          336 GVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG------  409 (525)
T ss_dssp             TSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC------
T ss_pred             HHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC------
Confidence            43    5899999999732                    13444555432      2 6799999998743111      


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH---hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~---~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                           .....| .+|...+.+.+   ..|++++.+.||.+ +.+....  ......+...           ....+..++
T Consensus       410 -----~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~--~~~~~~~~~~-----------g~~~l~pee  470 (525)
T 3qp9_A          410 -----AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTE--GATGERLRRL-----------GLRPLAPAT  470 (525)
T ss_dssp             -----TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGS--SHHHHHHHHT-----------TBCCBCHHH
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccc--hhhHHHHHhc-----------CCCCCCHHH
Confidence                 112336 88998888764   46899999999988 3221100  0111111111           124577899


Q ss_pred             HHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHH
Q 023078          195 LARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC  230 (287)
Q Consensus       195 va~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i  230 (287)
                      +++++..++..+..   ...+.   .+.+..+...+
T Consensus       471 ~a~~l~~~l~~~~~---~v~v~---~~dw~~~~~~~  500 (525)
T 3qp9_A          471 ALTALDTALGHGDT---AVTIA---DVDWSSFAPGF  500 (525)
T ss_dssp             HHHHHHHHHHHTCS---EEEEC---CBCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCC---eEEEE---eCCHHHHHhhc
Confidence            99999999986532   22222   25565555544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.98  E-value=3.3e-09  Score=88.88  Aligned_cols=146  Identities=8%  Similarity=-0.087  Sum_probs=88.2

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCcc-----ccccCCCCCchhh--hhhcCCcEEEEecCCCh--H-------
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAP-----IAQQLPGESDQEF--AEFSSKILHLKGDRKDY--D-------   62 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~--~-------   62 (287)
                      |||++  .||.++++.|+++|++|++.+|++..     ..+..........  ......+.++.+|+++.  +       
T Consensus         8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   87 (329)
T 3lt0_A            8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK   87 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCCHHHH
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhhhhhc
Confidence            68765  99999999999999999988765410     0000000000000  00113467788888766  5       


Q ss_pred             -----------HHHhhhcc-----CCccEEEEccCCCc----------------------cchHHHHHh----CCCCCcE
Q 023078           63 -----------FVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDA----LPNLEQF  100 (287)
Q Consensus        63 -----------~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~~a----~~~~~~~  100 (287)
                                 ++.++++.     -.+|++||+||...                      .+...+.++    ++...++
T Consensus        88 ~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~I  167 (329)
T 3lt0_A           88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI  167 (329)
T ss_dssp             TSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             ccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeE
Confidence                       55555542     16999999998521                      112223333    2222689


Q ss_pred             EEEeeeeEeecCCCCCCCCCCCCCCCc-cc-cchHHHHHHH-------Hh-cCCcEEEEccCceecC
Q 023078          101 IYCSSAGVYLKSDLLPHCETDTVDPKS-RH-KGKLNTESVL-------ES-KGVNWTSLRPVYIYGP  157 (287)
Q Consensus       101 i~~Ss~~~y~~~~~~~~~e~~~~~p~~-~~-~~k~~~E~~~-------~~-~~~~~~ilr~~~v~g~  157 (287)
                      |++||...+...           .... .| .+|...+.+.       .. .++++..+.||.+..+
T Consensus       168 v~isS~~~~~~~-----------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          168 ISLTYHASQKVV-----------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             EEEeCccccCCC-----------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            999997642111           1111 46 8998887664       24 6899999999988654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.97  E-value=6.7e-10  Score=100.53  Aligned_cols=184  Identities=12%  Similarity=0.032  Sum_probs=104.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC----chhhhhhcCCcEEEEecCCChHHHHhhhccC-----
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES----DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----   71 (287)
                      |||+|.||+++++.|+++|++|++++|.............    ..++..  .+.. ..+|+.+.+++.++++..     
T Consensus        25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~--~~~~-~~~D~~d~~~~~~~~~~~~~~~g  101 (613)
T 3oml_A           25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK--AGGE-AVADYNSVIDGAKVIETAIKAFG  101 (613)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH--TTCC-EEECCCCGGGHHHHHC-------
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH--hCCe-EEEEeCCHHHHHHHHHHHHHHCC
Confidence            8999999999999999999999999883221000000000    011111  1122 347999887777776532     


Q ss_pred             CccEEEEccCCCcc--------------------chHHHHHhC----C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           72 GFDVVYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        72 ~~d~vi~~a~~~~~--------------------~~~~l~~a~----~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      .+|++||+||....                    +..++.+++    +  +..++|++||...+...           ..
T Consensus       102 ~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~-----------~~  170 (613)
T 3oml_A          102 RVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN-----------FG  170 (613)
T ss_dssp             ---CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC-----------TT
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-----------CC
Confidence            68999999997321                    223333432    2  55799999997643211           11


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      ...| .+|...+.+.+       ..++.+..+.||.+ .+.             ..+. .     +......+..+|+|.
T Consensus       171 ~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~-------------~~~~-~-----~~~~~~~~~pedvA~  230 (613)
T 3oml_A          171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRM-------------TEGI-L-----PDILFNELKPKLIAP  230 (613)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------CCC-C-----CHHHHTTCCGGGTHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chh-------------hhhc-c-----chhhhhcCCHHHHHH
Confidence            2336 99998887653       35899999999853 110             0000 0     011123347899999


Q ss_pred             HHHHHhcCCc-CCCceEEeeCC
Q 023078          198 AFVQVLGNEK-ASRQVFNISGE  218 (287)
Q Consensus       198 ~~~~~~~~~~-~~~~~~~~~~~  218 (287)
                      +++.++.... ..|+.+++.+|
T Consensus       231 ~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          231 VVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             HHHHTTSTTCCCCSCEEEEETT
T ss_pred             HHHHhcCCCcCCCceEEEECCC
Confidence            9998886642 25777776543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.93  E-value=2.4e-09  Score=89.33  Aligned_cols=205  Identities=12%  Similarity=-0.014  Sum_probs=98.2

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCC-----------ccccc--cCCC----CCchhhhhhc---CCcEEEEecC
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQ--QLPG----ESDQEFAEFS---SKILHLKGDR   58 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~-----------~~~~~--~~~~----~~~~~~~~~~---~~~~~~~~d~   58 (287)
                      |||  +|.||+++++.|+++|++|++++|++           .....  .+..    ....++....   ....++.+|.
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   94 (319)
T 2ptg_A           15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDA   94 (319)
T ss_dssp             ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCT
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccccc
Confidence            688  89999999999999999999998752           11000  0000    0000111000   0124444442


Q ss_pred             ------------CC--------hHHHHhhhcc-----CCccEEEEccCCCc----------------------cchHHHH
Q 023078           59 ------------KD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPIL   91 (287)
Q Consensus        59 ------------~~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~   91 (287)
                                  ++        .+++.++++.     -.+|++||+||...                      .+...+.
T Consensus        95 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  174 (319)
T 2ptg_A           95 VFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLL  174 (319)
T ss_dssp             TCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHH
Confidence                        22        2234444332     16999999987431                      1123344


Q ss_pred             HhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------h-cCCcEEEEccCceecCC
Q 023078           92 DALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPL  158 (287)
Q Consensus        92 ~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~-~~~~~~ilr~~~v~g~~  158 (287)
                      +++.    ...++|++||...+....          .....| .+|...+.+.+       . .+++++.++||.+..+.
T Consensus       175 ~~~~~~m~~~g~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          175 QHFLPLMKEGGSALALSYIASEKVIP----------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             HHHGGGEEEEEEEEEEEECC----------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             HHHHHHHhcCceEEEEeccccccccC----------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            4432    226899999987542111          011235 88888776542       2 68999999999987763


Q ss_pred             CCCch---hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          159 NYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       159 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      .....   ...+.....+     .........-+..++|+|++++.++...  ...|+.+.+.++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          245 ASAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             hhhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            11100   0000000000     0000001123568999999999988753  23688999988754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.91  E-value=9.2e-09  Score=85.59  Aligned_cols=199  Identities=14%  Similarity=0.034  Sum_probs=110.8

Q ss_pred             CCc--ccchHHHHHHHHHHCCCeEEEEecCCc-------cccccCCCCCchhhhhhc--CCcEEEEec------------
Q 023078            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEFS--SKILHLKGD------------   57 (287)
Q Consensus         1 tGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~d------------   57 (287)
                      |||  +|.||+++++.|+++|++|++++|++.       .....+..  ...+....  ..+.++.+|            
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   92 (315)
T 2o2s_A           15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDE--DRKLPDGSLIEFAGVYPLDAAFDKPEDVPQD   92 (315)
T ss_dssp             ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHH--HHBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred             eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhh--hhhhhccccccccccccccccccccchhhhh
Confidence            688  899999999999999999999987531       00000000  00000000  012344443            


Q ss_pred             CCC--------hHHHHhhhcc-----CCccEEEEccCCCc----------------------cchHHHHHhCC----CCC
Q 023078           58 RKD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (287)
Q Consensus        58 ~~~--------~~~~~~~~~~-----~~~d~vi~~a~~~~----------------------~~~~~l~~a~~----~~~   98 (287)
                      ++|        .+++.++++.     -++|++||+||...                      .+...+.+++.    ...
T Consensus        93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g  172 (315)
T 2o2s_A           93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG  172 (315)
T ss_dssp             HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEE
T ss_pred             hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Confidence            222        3344444332     16999999998531                      11333444433    226


Q ss_pred             cEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH--------hcCCcEEEEccCceecCCCC-------Cc
Q 023078           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNY-------NP  162 (287)
Q Consensus        99 ~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~--------~~~~~~~ilr~~~v~g~~~~-------~~  162 (287)
                      ++|++||...+...          ......| .+|...+.+.+        ..+++++.++||.+..+...       ..
T Consensus       173 ~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~  242 (315)
T 2o2s_A          173 SAVTLSYLAAERVV----------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKS  242 (315)
T ss_dssp             EEEEEEEGGGTSCC----------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSC
T ss_pred             EEEEEecccccccC----------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccch
Confidence            89999997643211          0111246 89998887652        26899999999988654100       00


Q ss_pred             hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +...+........+.         .-+..++|+|++++.++....  ..|+.+.+.++..
T Consensus       243 ~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          243 FIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            001111111111111         124678999999999887432  3688888887753

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.83  E-value=2.5e-08  Score=92.69  Aligned_cols=182  Identities=17%  Similarity=0.157  Sum_probs=117.9

Q ss_pred             CCcccchHHHHHHHHH-HCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----Ccc
Q 023078            1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d   74 (287)
                      |||+|.||..+++.|. ++|. +|++++|+....... . ....++.....++.++.+|++|.+++.++++..    .+|
T Consensus       536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~-~-~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id  613 (795)
T 3slk_A          536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGA-A-ELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT  613 (795)
T ss_dssp             ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTH-H-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred             ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHH-H-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence            7999999999999999 7897 589999984431100 0 001223333567889999999999998888643    589


Q ss_pred             EEEEccCCC--------------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           75 VVYDINGRE--------------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        75 ~vi~~a~~~--------------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      .+||+||..                    ..++.++.+++. .. +||++||...+-+..           ....| .+|
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~-----------g~~~YaAak  681 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSG-----------GQGNYAAAN  681 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCS-----------SCHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCC-----------CCHHHHHHH
Confidence            999999873                    335677777765 44 899999976432111           11235 778


Q ss_pred             HHHHHHH---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       133 ~~~E~~~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      ...+.+.   +..|++++.+.||.+-.++............+.+..           ...+..++....+..++..+.
T Consensus       682 a~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          682 SFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHhCCC
Confidence            7666554   457999999999987655311111111111221111           234567888888888887644

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.77  E-value=5.9e-09  Score=73.41  Aligned_cols=85  Identities=24%  Similarity=0.182  Sum_probs=67.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|+ |++|+.+++.|.+.| ++|++++|++.+.....           ..++.++.+|+.+.+.+.++++  ++|+||++
T Consensus        11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   76 (118)
T 3ic5_A           11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA   76 (118)
T ss_dssp             ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence            588 999999999999999 99999999876532111           2477889999999999999998  99999999


Q ss_pred             cCCCccchHHHHHhCC--CCCcEE
Q 023078           80 NGREADEVEPILDALP--NLEQFI  101 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~--~~~~~i  101 (287)
                      ++..  ....+++++.  +++++.
T Consensus        77 ~~~~--~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           77 APFF--LTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             SCGG--GHHHHHHHHHHTTCEEEC
T ss_pred             CCch--hhHHHHHHHHHhCCCEEE
Confidence            9643  3466777765  555444

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.66  E-value=1.8e-07  Score=84.38  Aligned_cols=199  Identities=14%  Similarity=0.117  Sum_probs=121.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecC-CChHHH-Hhhhcc-CCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFV-KSSLSA-KGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~~~~~~-~~~d~vi   77 (287)
                      |||++-||+.+++.|+++|++|++.+|.....   .    ..++.....++..+.+|+ .+.+.+ .++.+. -.+|++|
T Consensus       328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~---~----~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK---T----VDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH---H----HHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH---H----HHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            89999999999999999999999988632210   0    111111123456667788 554332 222221 1699999


Q ss_pred             EccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        78 ~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      |+||....                    +    ++.++..++  +..++|++||....-..           .....| .
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-----------~~~~~Y~a  469 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-----------FGQANYSS  469 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----------TTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----------CCChhHHH
Confidence            99996321                    1    222333332  45689999997642110           012236 8


Q ss_pred             chHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|.....+.       ..+|+++..+.||. -.+     +.....    . .         ........+|+|.++..++
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~-----m~~~~~----~-~---------~~~~~~~pe~vA~~v~~L~  529 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA-----MTLSIM----R-E---------QDKNLYHADQVAPLLVYLG  529 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC-----C-----------------------CCSSCGGGTHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc-----cccccC----c-h---------hhccCCCHHHHHHHHHHHh
Confidence            999887664       24689999999983 211     111000    0 0         0112347899999999887


Q ss_pred             cCCc-CCCceEEeeCCC-----------------cccHHHHHHHHHHHhCCC
Q 023078          204 GNEK-ASRQVFNISGEK-----------------YVTFDGLARACAKAAGFP  237 (287)
Q Consensus       204 ~~~~-~~~~~~~~~~~~-----------------~~s~~~i~~~i~~~~g~~  237 (287)
                      .... ..|+.+.+.+|.                 ..+..++.+.+.+.....
T Consensus       530 s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          530 TDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             STTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             CCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            6432 467788877652                 357788888888777654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.59  E-value=5.4e-08  Score=93.40  Aligned_cols=189  Identities=12%  Similarity=0.062  Sum_probs=110.6

Q ss_pred             CCcccc-hHHHHHHHHHHCCCeEEEEe-cCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc--------
Q 023078            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (287)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------   70 (287)
                      |||+|. ||.++++.|+++|++|++++ |+.....+.... ..........++.++.+|++|.+++.++++.        
T Consensus       482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~e-L~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~  560 (1688)
T 2pff_A          482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS-IYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  560 (1688)
T ss_dssp             CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHH-TTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSS
T ss_pred             ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHH-HHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccc
Confidence            899998 99999999999999999984 544332110000 0000001124678899999999888777642        


Q ss_pred             -C--CccEEEEccCCCccc-----------------------hHHHHHhC------C--CCCcEEEEeeeeEeecCCCCC
Q 023078           71 -K--GFDVVYDINGREADE-----------------------VEPILDAL------P--NLEQFIYCSSAGVYLKSDLLP  116 (287)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~l~~a~------~--~~~~~i~~Ss~~~y~~~~~~~  116 (287)
                       .  .+|++||+||....+                       ...+.+++      +  +..++|++||.....+     
T Consensus       561 GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----  635 (1688)
T 2pff_A          561 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  635 (1688)
T ss_dssp             SCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----
Confidence             2  489999999863211                       11222322      2  2257999998643210     


Q ss_pred             CCCCCCCCCCccc-cchHHHHHHH-H----hc--CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceee
Q 023078          117 HCETDTVDPKSRH-KGKLNTESVL-E----SK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       117 ~~e~~~~~p~~~~-~~k~~~E~~~-~----~~--~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                              ....| .+|...+.+. +    +.  .++++.+.||.+.+.......      .. .....   .  .....
T Consensus       636 --------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~------e~-~~~~l---~--~iplR  695 (1688)
T 2pff_A          636 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN------NI-IAEGI---E--KMGVR  695 (1688)
T ss_dssp             --------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT------TT-CSTTT---S--SSSCC
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc------hH-HHHHH---H--hCCCC
Confidence                    12346 9999988873 1    11  277888999988743211100      00 00000   0  00112


Q ss_pred             eeeHHHHHHHHHHHhcCC-c--CCCceEEe
Q 023078          189 LGHVKDLARAFVQVLGNE-K--ASRQVFNI  215 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~~-~--~~~~~~~~  215 (287)
                      +...+|+|++++.++... .  ..|+.+.+
T Consensus       696 ~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          696 TFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             CCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            347899999999988765 1  14566655

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.56  E-value=6.1e-08  Score=95.60  Aligned_cols=187  Identities=12%  Similarity=0.055  Sum_probs=111.9

Q ss_pred             CCcccc-hHHHHHHHHHHCCCeEEEEe-cCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc--------
Q 023078            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (287)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------   70 (287)
                      |||+|. ||.++++.|+++|++|++++ |+.....+... ...........++.++.+|++|.+++.++++.        
T Consensus       681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~-eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~  759 (1887)
T 2uv8_A          681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQ-SIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  759 (1887)
T ss_dssp             ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHH-HHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999985 55443211100 00000011134678899999999888877652        


Q ss_pred             -C--CccEEEEccCCCccc-----------------------hHHHHHhC---C-----CCCcEEEEeeeeEeecCCCCC
Q 023078           71 -K--GFDVVYDINGREADE-----------------------VEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP  116 (287)
Q Consensus        71 -~--~~d~vi~~a~~~~~~-----------------------~~~l~~a~---~-----~~~~~i~~Ss~~~y~~~~~~~  116 (287)
                       .  .+|++||+||....+                       ...+.+++   .     +..++|++||...+.+     
T Consensus       760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----  834 (1887)
T 2uv8_A          760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  834 (1887)
T ss_dssp             SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence             2  489999999864211                       11223322   1     2258999998753211     


Q ss_pred             CCCCCCCCCCccc-cchHHHHHH-HH----hc--CCcEEEEccCceec-CCCC-CchhHHHHHHHHcCCCcccCCCCCce
Q 023078          117 HCETDTVDPKSRH-KGKLNTESV-LE----SK--GVNWTSLRPVYIYG-PLNY-NPVEEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       117 ~~e~~~~~p~~~~-~~k~~~E~~-~~----~~--~~~~~ilr~~~v~g-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                              ....| .+|...+.+ .+    +.  .++++.+.||++.+ +... .....    ......+          
T Consensus       835 --------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~~p----------  892 (1887)
T 2uv8_A          835 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGIEKMG----------  892 (1887)
T ss_dssp             --------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTH----HHHHTTS----------
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHH----HHHHhcC----------
Confidence                    12246 899988776 21    11  28899999999974 3111 01111    1111110          


Q ss_pred             eeeeeHHHHHHHHHHHhcCC-c--CCCceEEe
Q 023078          187 TQLGHVKDLARAFVQVLGNE-K--ASRQVFNI  215 (287)
Q Consensus       187 ~~~i~~~Dva~~~~~~~~~~-~--~~~~~~~~  215 (287)
                      .-+...+|+|.+++.++... .  ..|..+.+
T Consensus       893 lr~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          893 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             CCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            12347999999999888654 1  13556665

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.52  E-value=3.3e-07  Score=90.37  Aligned_cols=188  Identities=9%  Similarity=0.015  Sum_probs=112.6

Q ss_pred             CCcccc-hHHHHHHHHHHCCCeEEEEecC-CccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-------C
Q 023078            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (287)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~   71 (287)
                      |||+|. ||.++++.|+++|++|++++++ .....+... .....+.....++.++.+|++|.+++.++++.       .
T Consensus       658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~-eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~  736 (1878)
T 2uv9_A          658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQ-GIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGL  736 (1878)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSC
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHH-HHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhccc
Confidence            799999 9999999999999999998644 333111000 00001111134678899999999888877652       2


Q ss_pred             --CccEEEEccCCCccc-----------------------hHHHHHh------CC--CCCcEEEEeeeeEeecCCCCCCC
Q 023078           72 --GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHC  118 (287)
Q Consensus        72 --~~d~vi~~a~~~~~~-----------------------~~~l~~a------~~--~~~~~i~~Ss~~~y~~~~~~~~~  118 (287)
                        .+|++||+||....+                       ...+.++      +.  +..+||++||...+.+       
T Consensus       737 G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-------  809 (1878)
T 2uv9_A          737 GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-------  809 (1878)
T ss_dssp             CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-------
T ss_pred             CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-------
Confidence              489999999863211                       1112222      22  2358999999753211       


Q ss_pred             CCCCCCCCccc-cchHHHHHHHH----h---cCCcEEEEccCcee-cCCCCCchhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          119 ETDTVDPKSRH-KGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       119 e~~~~~p~~~~-~~k~~~E~~~~----~---~~~~~~ilr~~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                            ....| .+|...+.+.+    +   .+++++.+.||++- .+....   ...........++          -+
T Consensus       810 ------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~---~~~~~~~~~~~pl----------r~  870 (1878)
T 2uv9_A          810 ------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA---NNLVAEGVEKLGV----------RT  870 (1878)
T ss_dssp             ------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH---HHHTHHHHHTTTC----------CC
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc---chhhHHHHHhcCC----------CC
Confidence                  12245 89998777642    1   13889999999886 332111   0111111111110          23


Q ss_pred             eeHHHHHHHHHHHhcCCc---CCCceEEe
Q 023078          190 GHVKDLARAFVQVLGNEK---ASRQVFNI  215 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~---~~~~~~~~  215 (287)
                      ...+|+|++++.++....   ..|..+.+
T Consensus       871 ~sPeEVA~avlfLaSd~a~s~iTGq~I~V  899 (1878)
T 2uv9_A          871 FSQQEMAFNLLGLMAPAIVNLCQSDPVFA  899 (1878)
T ss_dssp             BCHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred             CCHHHHHHHHHHHhCCcccccccCcEEEE
Confidence            478999999998886532   24666766

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.40  E-value=6.2e-07  Score=65.19  Aligned_cols=91  Identities=13%  Similarity=0.109  Sum_probs=64.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~   79 (287)
                      +|+ |.+|+.+++.|.+.|++|++++|++.... .+.          ..+...+.+|..+.+.+.++ +.  ++|+||++
T Consensus        12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   77 (144)
T 2hmt_A           12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA   77 (144)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-TTT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence            476 99999999999999999999999765532 222          12456788999988887765 55  89999999


Q ss_pred             cCCCccchHHHHHhCC--CCCcEEEEee
Q 023078           80 NGREADEVEPILDALP--NLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~--~~~~~i~~Ss  105 (287)
                      ++........+...++  +..+++..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           78 IGANIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence            8865333334444444  5556654443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.39  E-value=1.6e-06  Score=78.28  Aligned_cols=201  Identities=12%  Similarity=0.083  Sum_probs=114.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcccc-----ccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhh----cc-
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-----QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~-   70 (287)
                      |||++-||+.+++.|+++|++|++.+|+.....     +.+. ....++..  .+-. ..+|..|.+++.+++    +. 
T Consensus        14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~-~~~~~i~~--~g~~-~~~d~~d~~~~~~~v~~~~~~~   89 (604)
T 2et6_A           14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAAD-VVVDEIVK--NGGV-AVADYNNVLDGDKIVETAVKNF   89 (604)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHH-HHHHHHHH--TTCE-EEEECCCTTCHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHH-HHHHHHHh--cCCe-EEEEcCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999999987641100     0000 00011111  1112 234666653332222    21 


Q ss_pred             CCccEEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           71 KGFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      -.+|++||+||....                    +    ++.++..++  +..++|++||....-...           
T Consensus        90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~-----------  158 (604)
T 2et6_A           90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF-----------  158 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-----------
Confidence            169999999996321                    1    222333333  456899999976421110           


Q ss_pred             CCccc-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          125 PKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ....| .+|.....+.       ..+|+++..+.|+ +  .   ..+    ..   ....       .........+|+|
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~--~---T~m----~~---~~~~-------~~~~~~~~pe~vA  218 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A--R---SRM----TE---SIMP-------PPMLEKLGPEKVA  218 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C--C---CHH----HH---TTSC-------HHHHTTCSHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C--c---Ccc----cc---ccCC-------hhhhccCCHHHHH
Confidence            12236 8999887664       2468999999996 2  1   111    10   0000       0011224789999


Q ss_pred             HHHHHHhcCCc-CCCceEEeeCC------------------CcccHHHHHHHHHHHhCC
Q 023078          197 RAFVQVLGNEK-ASRQVFNISGE------------------KYVTFDGLARACAKAAGF  236 (287)
Q Consensus       197 ~~~~~~~~~~~-~~~~~~~~~~~------------------~~~s~~~i~~~i~~~~g~  236 (287)
                      .++..++.... ..|+.+.+.++                  ...+..++.+.+.+....
T Consensus       219 ~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          219 PLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             HHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            99999887542 25777777654                  235667888877766543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.36  E-value=7.5e-07  Score=76.34  Aligned_cols=82  Identities=6%  Similarity=-0.076  Sum_probs=58.2

Q ss_pred             CCcccchHHH--HHHHHHHCCCeEEEEecCCccccccCC-------CCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-
Q 023078            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (287)
Q Consensus         1 tGatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-   70 (287)
                      |||++-||.+  ++..|.++|++|++++|+.........       .............+..+.+|+++.+++.++++. 
T Consensus        66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i  145 (418)
T 4eue_A           66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI  145 (418)
T ss_dssp             ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            7999999999  999999999999999997654221110       000111122245678899999998877776653 


Q ss_pred             ----CCccEEEEccCC
Q 023078           71 ----KGFDVVYDINGR   82 (287)
Q Consensus        71 ----~~~d~vi~~a~~   82 (287)
                          -++|++||++|.
T Consensus       146 ~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          146 KDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHTTCCEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCcc
Confidence                169999999886

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.35  E-value=1.6e-06  Score=73.30  Aligned_cols=82  Identities=11%  Similarity=-0.044  Sum_probs=58.4

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEEecCCccccccCCC-------CCchhhhhhcCCcEEEEecCCChHHHHhhhcc--
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--   70 (287)
                      |||++-||.++++.|++ +|++|++++|+.......+..       ............+..+.+|+++++++.++++.  
T Consensus        53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  132 (405)
T 3zu3_A           53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK  132 (405)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999876542211100       00111222235678899999998877776653  


Q ss_pred             ---CCccEEEEccCC
Q 023078           71 ---KGFDVVYDINGR   82 (287)
Q Consensus        71 ---~~~d~vi~~a~~   82 (287)
                         -++|++||+||.
T Consensus       133 ~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          133 QDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCEEEEcCcc
Confidence               169999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.26  E-value=1.3e-06  Score=74.48  Aligned_cols=82  Identities=12%  Similarity=-0.046  Sum_probs=58.1

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEEecCCccccccCCC-------CCchhhhhhcCCcEEEEecCCChHHHHhhhcc--
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--   70 (287)
                      |||++-||.++++.|++ +|++|++++|+..........       ............+..+.+|+++++++.++++.  
T Consensus        67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  146 (422)
T 3s8m_A           67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK  146 (422)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            79999999999999999 999999999976542211100       00012222245678899999998776665542  


Q ss_pred             --C--CccEEEEccCC
Q 023078           71 --K--GFDVVYDINGR   82 (287)
Q Consensus        71 --~--~~d~vi~~a~~   82 (287)
                        .  ++|++||+||.
T Consensus       147 ~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          147 TEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHSCSCEEEEEECCCC
T ss_pred             HHcCCCCCEEEEcCcc
Confidence              2  68999999875

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.18  E-value=2.3e-06  Score=62.06  Aligned_cols=85  Identities=24%  Similarity=0.187  Sum_probs=60.2

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      .|.+|+++++.|.++|++|+++++++......         .  ..++.++.+|.++++.+.++- ..++|+||.+.+ +
T Consensus        14 ~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~---------~--~~~~~~~~gd~~~~~~l~~~~-~~~~d~vi~~~~-~   80 (141)
T 3llv_A           14 SEAAGVGLVRELTAAGKKVLAVDKSKEKIELL---------E--DEGFDAVIADPTDESFYRSLD-LEGVSAVLITGS-D   80 (141)
T ss_dssp             CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------H--HTTCEEEECCTTCHHHHHHSC-CTTCSEEEECCS-C
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH---------H--HCCCcEEECCCCCHHHHHhCC-cccCCEEEEecC-C
Confidence            49999999999999999999999987653211         1  246788999999999887762 237999998877 3


Q ss_pred             ccchHHHHHhCC--CCCcEE
Q 023078           84 ADEVEPILDALP--NLEQFI  101 (287)
Q Consensus        84 ~~~~~~l~~a~~--~~~~~i  101 (287)
                      ......+...++  +..+++
T Consensus        81 ~~~n~~~~~~a~~~~~~~ii  100 (141)
T 3llv_A           81 DEFNLKILKALRSVSDVYAI  100 (141)
T ss_dssp             HHHHHHHHHHHHHHCCCCEE
T ss_pred             HHHHHHHHHHHHHhCCceEE
Confidence            333333444444  544444

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.10  E-value=1.7e-06  Score=70.80  Aligned_cols=75  Identities=19%  Similarity=0.197  Sum_probs=58.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|.+|++++..|+++|++|++++|+..+..+..     ..+... .++.++.+|+++.+++.++++  .+|+|||++
T Consensus       125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~-----~~~~~~-~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a  196 (287)
T 1lu9_A          125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVNKR-FKVNVTAAETADDASRAEAVK--GAHFVFTAG  196 (287)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHH-HTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH-----HHHHhc-CCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence            699999999999999999999999999865532111     111111 246678899999999999998  799999999


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.02  E-value=3.9e-06  Score=86.72  Aligned_cols=143  Identities=17%  Similarity=0.149  Sum_probs=93.8

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~~~d~   75 (287)
                      |||+|-||..+++.|+++|++ |++++|+..+......  ....+.....++.++.+|++|.+++.++++.    -.+|.
T Consensus      1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~--~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A         1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR--QVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH--HHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH--HHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999986 7778887654210000  0111222235678889999999888777653    26899


Q ss_pred             EEEccCCCc--------------------cchHHHHHh----CCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~--------------------~~~~~l~~a----~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+||...                    .++.++.++    +....+||++||....-+.           .....| .
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~-----------~g~~~Y~a 2036 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN-----------AGQANYGF 2036 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC-----------TTCHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC-----------CCcHHHHH
Confidence            999998631                    234444333    3345789999997642111           011236 8


Q ss_pred             chHHHHHHHH---hcCCcEEEEccCceec
Q 023078          131 GKLNTESVLE---SKGVNWTSLRPVYIYG  156 (287)
Q Consensus       131 ~k~~~E~~~~---~~~~~~~ilr~~~v~g  156 (287)
                      +|...+.+.+   ..|++...+..+.+-+
T Consensus      2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence            8998887764   5688887777765533

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.01  E-value=6.5e-06  Score=59.38  Aligned_cols=88  Identities=17%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~   79 (287)
                      +|+ |++|+.+++.|.+.|++|++++|++..... +        .. ..++.++.+|..+.+.+.+. ++  ++|+||++
T Consensus        10 iG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~-~--------~~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   76 (140)
T 1lss_A           10 AGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-A--------SA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAV   76 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H--------HH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-H--------HH-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence            354 999999999999999999999997654211 1        10 12567788999888777654 55  89999998


Q ss_pred             cCCCccchHHHHHhCC--CCCcEEE
Q 023078           80 NGREADEVEPILDALP--NLEQFIY  102 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~--~~~~~i~  102 (287)
                      .+... ....+.+.++  +..++|.
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~~ii~  100 (140)
T 1lss_A           77 TGKEE-VNLMSSLLAKSYGINKTIA  100 (140)
T ss_dssp             CSCHH-HHHHHHHHHHHTTCCCEEE
T ss_pred             eCCch-HHHHHHHHHHHcCCCEEEE
Confidence            76532 1223334433  5556664

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.97  E-value=8.3e-06  Score=67.86  Aligned_cols=94  Identities=16%  Similarity=0.262  Sum_probs=61.2

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |||+|++|..++..|+.+|  ++|+++++++.. ..      ..++........ +.+ +.+..++.++++  ++|+|||
T Consensus        14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~------~~dL~~~~~~~~-v~~-~~~t~d~~~al~--gaDvVi~   82 (326)
T 1smk_A           14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GV------TADISHMDTGAV-VRG-FLGQQQLEAALT--GMDLIIV   82 (326)
T ss_dssp             ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HH------HHHHHTSCSSCE-EEE-EESHHHHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hH------HHHhhcccccce-EEE-EeCCCCHHHHcC--CCCEEEE
Confidence            6899999999999999988  899999877641 10      001111011111 122 233556777888  9999999


Q ss_pred             ccCCCc--------------cchHHHHHhCC--CCCcEEEEee
Q 023078           79 INGREA--------------DEVEPILDALP--NLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss  105 (287)
                      +++...              ..++++++++.  +.+.+|+++|
T Consensus        83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            998632              23566777765  6667777776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.96  E-value=1.3e-05  Score=69.71  Aligned_cols=71  Identities=17%  Similarity=0.192  Sum_probs=55.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +| +|++|+++++.|++.|++|++.+|+..+.......         ..++..+.+|+.+.+++.++++  ++|+|||++
T Consensus         9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~---------~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a   76 (450)
T 1ff9_A            9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLI   76 (450)
T ss_dssp             EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh---------cCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence            46 89999999999999999999999987653222110         1246778899999999999888  899999999


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        77 ~~~   79 (450)
T 1ff9_A           77 PYT   79 (450)
T ss_dssp             C--
T ss_pred             ccc
Confidence            863

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.72  E-value=7.4e-05  Score=54.85  Aligned_cols=72  Identities=15%  Similarity=0.258  Sum_probs=54.0

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a   80 (287)
                      | .|.+|+.+++.|.+.|++|+++++++....+.+.       .....++.++.+|.++++.+.++ ++  ++|+||-+.
T Consensus        10 G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   79 (153)
T 1id1_A           10 G-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALS   79 (153)
T ss_dssp             C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECS
T ss_pred             C-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEec
Confidence            5 5999999999999999999999997532111110       00124688999999999988876 66  899999877


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        80 ~~d   82 (153)
T 1id1_A           80 DND   82 (153)
T ss_dssp             SCH
T ss_pred             CCh
Confidence            643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.70  E-value=6.4e-06  Score=68.68  Aligned_cols=95  Identities=9%  Similarity=0.016  Sum_probs=59.7

Q ss_pred             CCcccchHHHHHHHHHHCCC-------eEEEEecC----CccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-------~V~~l~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   69 (287)
                      |||+|++|++++..|+.+|.       +|++++++    ..+....     ..++......+   ..++....++.++++
T Consensus        11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~-----~~dl~~~~~~~---~~~i~~~~~~~~al~   82 (329)
T 1b8p_A           11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGV-----MMEIDDCAFPL---LAGMTAHADPMTAFK   82 (329)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHH-----HHHHHTTTCTT---EEEEEEESSHHHHTT
T ss_pred             ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhh-----HHHHhhhcccc---cCcEEEecCcHHHhC
Confidence            79999999999999998875       79998887    3221100     00111000011   235544455677888


Q ss_pred             cCCccEEEEccCCCcc--------------chHHHHHhCC--C-CC-cEEEEee
Q 023078           70 AKGFDVVYDINGREAD--------------EVEPILDALP--N-LE-QFIYCSS  105 (287)
Q Consensus        70 ~~~~d~vi~~a~~~~~--------------~~~~l~~a~~--~-~~-~~i~~Ss  105 (287)
                        ++|+|||+++....              .++++++++.  . .. +||++|.
T Consensus        83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence              99999999986432              2455666654  3 33 7888875

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.67  E-value=0.0002  Score=52.66  Aligned_cols=68  Identities=16%  Similarity=0.349  Sum_probs=52.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|++++|++.+......          ..+...+.+|..+.+.+.++ ++  ++|+||.+.+
T Consensus        26 G~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~   93 (155)
T 2g1u_A           26 GCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGME--KADMVFAFTN   93 (155)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSS
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeC
Confidence            35999999999999999999999998766332210          13566778898888777665 55  7999998877


Q ss_pred             C
Q 023078           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        94 ~   94 (155)
T 2g1u_A           94 D   94 (155)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.60  E-value=4.5e-05  Score=66.46  Aligned_cols=70  Identities=21%  Similarity=0.144  Sum_probs=55.5

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|| |++|+.++..|++. +++|++.+|+.++....         ... .++..+.+|+.+.+++.++++  ++|+|||+
T Consensus        29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l---------a~~-~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~   95 (467)
T 2axq_A           29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQAL---------AKP-SGSKAISLDVTDDSALDKVLA--DNDVVISL   95 (467)
T ss_dssp             ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHH---------HGG-GTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred             ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH---------HHh-cCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence            476 99999999999998 78999999987653211         111 246677899999989988888  89999999


Q ss_pred             cCCC
Q 023078           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      ++..
T Consensus        96 tp~~   99 (467)
T 2axq_A           96 IPYT   99 (467)
T ss_dssp             SCGG
T ss_pred             Cchh
Confidence            8864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.58  E-value=6.9e-05  Score=63.40  Aligned_cols=86  Identities=15%  Similarity=0.089  Sum_probs=64.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|| |++|+.+++.|.+ .++|++.+++.++....            ...+..+..|..|.+++.++++  ++|+||+++
T Consensus        22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~------------~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~   85 (365)
T 3abi_A           22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV------------KEFATPLKVDASNFDKLVEVMK--EFELVIGAL   85 (365)
T ss_dssp             ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH------------TTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH------------hccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence            377 9999999998865 58999999987663222            2456778899999999999998  899999998


Q ss_pred             CCCccchHHHHHhCC-CCCcEEEEe
Q 023078           81 GREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~-~~~~~i~~S  104 (287)
                      +...  ...++++|- ...+++=+|
T Consensus        86 p~~~--~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGFL--GFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGGG--HHHHHHHHHHHTCEEEECC
T ss_pred             CCcc--cchHHHHHHhcCcceEeee
Confidence            8652  345777765 334555443

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.58  E-value=5.9e-05  Score=62.38  Aligned_cols=94  Identities=18%  Similarity=0.146  Sum_probs=57.7

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEec--CCccccccCCCCCchhhhh---hc-CCcEEEEecCCChHHHHhhhccCC
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAE---FS-SKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~d~~~~~~~~~~~~~~~   72 (287)
                      |||+|++|++++..|+.++.  ++.++++  +..+.....     .++..   .. ..+.+...    .+++.++++  +
T Consensus         6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~-----~dl~~~~~~~~~~~~i~~~----~d~l~~al~--g   74 (313)
T 1hye_A            6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLR-----EDIYDALAGTRSDANIYVE----SDENLRIID--E   74 (313)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHH-----HHHHHHHTTSCCCCEEEEE----ETTCGGGGT--T
T ss_pred             ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHH-----HHHHHhHHhcCCCeEEEeC----CcchHHHhC--C
Confidence            69999999999999998874  6777887  432111000     00100   00 12232221    123456677  9


Q ss_pred             ccEEEEccCCC--------------ccchHHHHHhCC--CCCcEEEEeee
Q 023078           73 FDVVYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSA  106 (287)
Q Consensus        73 ~d~vi~~a~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~  106 (287)
                      +|+|||+++..              ...+++++++++  + +++++++|-
T Consensus        75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            99999999863              223666777776  6 778877763

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.56  E-value=5e-05  Score=59.35  Aligned_cols=69  Identities=17%  Similarity=0.288  Sum_probs=54.5

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a   80 (287)
                      | .|.+|+++++.|.++|++|+++++++.......         . ..++.++.+|.++.+.+.++ ++  ++|+||-+.
T Consensus         7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~---------~-~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            7 G-GETTAYYLARSMLSRKYGVVIINKDRELCEEFA---------K-KLKATIIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH---------H-HSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH---------H-HcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            5 599999999999999999999999876632111         0 23678899999999988876 55  899999776


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus        74 ~~d   76 (218)
T 3l4b_C           74 PRD   76 (218)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            654

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.56  E-value=5.6e-05  Score=64.87  Aligned_cols=87  Identities=13%  Similarity=0.068  Sum_probs=63.2

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecCCccccccCCCCCchhhhh-hcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      +|| |++|+.+++.|++.|   .+|++.+|+..+..+...     .+.. ...++..+.+|++|.+++.++++..++|+|
T Consensus         7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~-----~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQ-----SIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHH-----HHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHH-----HhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            577 899999999999987   389999998766322110     1110 013588899999999999999984459999


Q ss_pred             EEccCCCccchHHHHHhCC
Q 023078           77 YDINGREADEVEPILDALP   95 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~   95 (287)
                      ||+++...  ...++++|.
T Consensus        81 in~ag~~~--~~~v~~a~l   97 (405)
T 4ina_A           81 LNIALPYQ--DLTIMEACL   97 (405)
T ss_dssp             EECSCGGG--HHHHHHHHH
T ss_pred             EECCCccc--ChHHHHHHH
Confidence            99998643  345666654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.53  E-value=8.8e-05  Score=53.59  Aligned_cols=68  Identities=10%  Similarity=0.166  Sum_probs=54.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|+++++++..... +        .  ..++.++.+|.++++.+.++ ++  ++|+||-+.+
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~--------~--~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~   80 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDE-L--------R--ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP   80 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-H--------H--HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-H--------H--HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence            46999999999999999999999998776321 1        1  25788899999999888765 44  7899997766


Q ss_pred             CC
Q 023078           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus        81 ~~   82 (140)
T 3fwz_A           81 NG   82 (140)
T ss_dssp             CH
T ss_pred             Ch
Confidence            54

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.49  E-value=0.00025  Score=55.40  Aligned_cols=64  Identities=14%  Similarity=0.207  Sum_probs=44.9

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHH----HHhhhccCCccEEEEc
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF----VKSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~~~~~~d~vi~~   79 (287)
                      ||.+|.++++.|+++|++|++++|+.... ...           ..++..+  +..+.++    +.+.+.  ++|++||+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~-----------~~~~~~~--~v~s~~em~~~v~~~~~--~~Dili~a   91 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALK-PEP-----------HPNLSIR--EITNTKDLLIEMQERVQ--DYQVLIHS   91 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCC-----------CTTEEEE--ECCSHHHHHHHHHHHGG--GCSEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccC-----------CCCeEEE--EHhHHHHHHHHHHHhcC--CCCEEEEc
Confidence            99999999999999999999999975421 100           1345544  4444433    333444  79999999


Q ss_pred             cCCC
Q 023078           80 NGRE   83 (287)
Q Consensus        80 a~~~   83 (287)
                      |++.
T Consensus        92 AAvs   95 (232)
T 2gk4_A           92 MAVS   95 (232)
T ss_dssp             SBCC
T ss_pred             Cccc
Confidence            9974

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.47  E-value=4.4e-05  Score=62.82  Aligned_cols=91  Identities=16%  Similarity=0.142  Sum_probs=56.5

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEec--CCccccccCCCCCchhhhh---hcCCcEEEEecCCChHHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~   73 (287)
                      |||+|++|++++..|+.++.  ++.++++  ++.+....     ..++..   ...++.+.. +  +    .++++  ++
T Consensus         6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~-----~~dl~~~~~~~~~~~v~~-~--~----~~a~~--~a   71 (303)
T 1o6z_A            6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQ-----AADTNHGIAYDSNTRVRQ-G--G----YEDTA--GS   71 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHH-----HHHHHHHHTTTCCCEEEE-C--C----GGGGT--TC
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHH-----HHHHHHHHhhCCCcEEEe-C--C----HHHhC--CC
Confidence            69999999999999998875  6888877  43321110     011111   112333333 1  2    34566  99


Q ss_pred             cEEEEccCCCc--------------cchHHHHHhCC--CCCcEEEEee
Q 023078           74 DVVYDINGREA--------------DEVEPILDALP--NLEQFIYCSS  105 (287)
Q Consensus        74 d~vi~~a~~~~--------------~~~~~l~~a~~--~~~~~i~~Ss  105 (287)
                      |+|||+++...              ..+++++++++  +...+++++|
T Consensus        72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99999998642              23566777765  5567777765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.40  E-value=0.00019  Score=55.00  Aligned_cols=92  Identities=16%  Similarity=0.137  Sum_probs=59.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH---HHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+... .        .+  .+... ..|..+.+   .+.+.....++|++|
T Consensus        45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-~--------~~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-L--------SR--LGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-H--------HT--TCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HH--cCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            6999999999999999999999999997654211 1        01  12221 23555543   333333333699999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ++++.  ......++.++...+++.+++.
T Consensus       113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  139 (198)
T 1pqw_A          113 NSLAG--EAIQRGVQILAPGGRFIELGKK  139 (198)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCG
T ss_pred             ECCch--HHHHHHHHHhccCCEEEEEcCC
Confidence            99873  3455566666644578877653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.36  E-value=0.00014  Score=54.98  Aligned_cols=79  Identities=19%  Similarity=0.097  Sum_probs=57.7

Q ss_pred             cccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh--hccCCccEEEEc
Q 023078            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~d~vi~~   79 (287)
                      |.|.+|+.+++.|.+. |++|+++++++.+... +        .  ..++..+.+|.++.+.+.++  ++  ++|+||.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~--------~--~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~  112 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQ-H--------R--SEGRNVISGDATDPDFWERILDTG--HVKLVLLA  112 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-H--------H--HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-H--------H--HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence            3699999999999999 9999999998765321 1        1  24677889999998888776  65  89999987


Q ss_pred             cCCCccchHHHHHhCC
Q 023078           80 NGREADEVEPILDALP   95 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~   95 (287)
                      .+.. .....++..++
T Consensus       113 ~~~~-~~~~~~~~~~~  127 (183)
T 3c85_A          113 MPHH-QGNQTALEQLQ  127 (183)
T ss_dssp             CSSH-HHHHHHHHHHH
T ss_pred             CCCh-HHHHHHHHHHH
Confidence            6642 23333444443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.18  E-value=0.0009  Score=52.11  Aligned_cols=64  Identities=11%  Similarity=0.100  Sum_probs=45.2

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc--CCccEEEEccC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~d~vi~~a~   81 (287)
                      ||.+|.++++.|.++|++|++++++..- .  .           ..++.  ..|+.+.+++.+.+..  .++|++||+||
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~-----------~~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVSL-P--T-----------PPFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC-C--C-----------CTTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCccc-c--c-----------CCCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence            7999999999999999999999886521 1  1           12333  4577776554443321  16999999999


Q ss_pred             CC
Q 023078           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus        97 v~   98 (226)
T 1u7z_A           97 VA   98 (226)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.00056  Score=56.84  Aligned_cols=91  Identities=16%  Similarity=0.122  Sum_probs=60.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH---HHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+... .        .+.  +... ..|..+.+   .+.+.....++|++|
T Consensus       147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~-~--------~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-A--------LKA--GAWQ-VINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-H--------HHH--TCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HHc--CCCE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence            6999999999999999999999999998654211 1        111  1211 23554433   333433334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|  .......++.++...+++.+++
T Consensus       215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~  240 (327)
T 1qor_A          215 DSVG--RDTWERSLDCLQRRGLMVSFGN  240 (327)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence            9998  4556667777774457776664

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.09  E-value=0.00088  Score=55.78  Aligned_cols=91  Identities=19%  Similarity=0.203  Sum_probs=59.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|++|++++|++.+... +        .+....  . ..|..+.   +.+.+.....++|++|
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~--------~~~g~~--~-~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET-A--------RKLGCH--H-TINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HHHTCS--E-EEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HHcCCC--E-EEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            6999999999999999999999999998654211 1        111121  1 2355443   3344444334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~  245 (333)
T 1wly_A          220 DSIGK--DTLQKSLDCLRPRGMCAAYGH  245 (333)
T ss_dssp             ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred             ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence            99986  455666777764446776653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=96.97  E-value=0.00065  Score=57.49  Aligned_cols=92  Identities=12%  Similarity=0.089  Sum_probs=62.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |.+|+.+++.|...|.+|++++|++.+....         .+ .-+.. +.+|..+.+.+.+.++  ++|+||+++
T Consensus       172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~---------~~-~~g~~-~~~~~~~~~~l~~~~~--~~DvVi~~~  237 (369)
T 2eez_A          172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYL---------DD-VFGGR-VITLTATEANIKKSVQ--HADLLIGAV  237 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HH-HTTTS-EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH---------HH-hcCce-EEEecCCHHHHHHHHh--CCCEEEECC
Confidence            477 9999999999999999999999987652111         00 01111 4567777888888887  899999998


Q ss_pred             CCCcc-----chHHHHHhCCCCCcEEEEeee
Q 023078           81 GREAD-----EVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        81 ~~~~~-----~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +....     -....++.++....+|.+|+.
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence            85431     145566777755578877754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.85  E-value=0.002  Score=54.13  Aligned_cols=82  Identities=12%  Similarity=0.043  Sum_probs=59.5

Q ss_pred             CCcccchHHHHHHHHH-HCCCeEEEEecCCccccccCCC-------CCchhhhhhcCCcEEEEecCCChHHHHhhhccC-
Q 023078            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-   71 (287)
                      |||++-+|.+.+..|. +.|..|+++.+......+....       .......+.......+.+|+++++.+.++++.. 
T Consensus        56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~  135 (401)
T 4ggo_A           56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK  135 (401)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence            7999999999999998 6799999999876653322211       001222333467788999999988777776532 


Q ss_pred             ----CccEEEEccCC
Q 023078           72 ----GFDVVYDINGR   82 (287)
Q Consensus        72 ----~~d~vi~~a~~   82 (287)
                          ++|++||.++.
T Consensus       136 ~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          136 KKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HTTCCEEEEEECCCC
T ss_pred             HhcCCCCEEEEeccc
Confidence                79999999885

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.78  E-value=0.0021  Score=53.67  Aligned_cols=91  Identities=16%  Similarity=0.096  Sum_probs=60.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|..+++.+...|.+|+++++++.+... .        .+.  +... ..|..+.   +.+.+.....++|+||
T Consensus       173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~--------~~~--ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR-A--------KAL--GADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HHH--TCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------Hhc--CCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            6999999999999999999999999998665221 1        111  2211 1355543   2344443334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|  .......++.++...+++.+++
T Consensus       241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~  266 (343)
T 2eih_A          241 DHTG--ALYFEGVIKATANGGRIAIAGA  266 (343)
T ss_dssp             ESSC--SSSHHHHHHHEEEEEEEEESSC
T ss_pred             ECCC--HHHHHHHHHhhccCCEEEEEec
Confidence            9999  3556677788774447777664

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.78  E-value=0.00059  Score=71.37  Aligned_cols=82  Identities=11%  Similarity=0.068  Sum_probs=57.0

Q ss_pred             CCcccc-hHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---------
Q 023078            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (287)
Q Consensus         1 tGatG~-iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------   70 (287)
                      |||++- ||..+++.|+++|.+|++.+|+..............++......+..+.+|+++.+++.++++.         
T Consensus      2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D         2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred             eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence            799999 9999999999999999999998655100000000011111124567889999999888776431         


Q ss_pred             CCccEEEEccCC
Q 023078           71 KGFDVVYDINGR   82 (287)
Q Consensus        71 ~~~d~vi~~a~~   82 (287)
                      -++|++||+||.
T Consensus      2222 G~IDILVNNAGi 2233 (3089)
T 3zen_D         2222 GPQSIHLKDAQT 2233 (3089)
T ss_dssp             SSSEEEECCCCC
T ss_pred             CCCCEEEECCCc
Confidence            158999999986

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.75  E-value=0.00074  Score=53.21  Aligned_cols=65  Identities=12%  Similarity=-0.042  Sum_probs=51.8

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~~   82 (287)
                      .|.+|+.+++.|.+.|+ |+++++++.....         +.   .++.++.+|.++++.+.++ ++  ++|.||.+.+.
T Consensus        17 ~G~~G~~la~~L~~~g~-v~vid~~~~~~~~---------~~---~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~   81 (234)
T 2aef_A           17 WSESTLECLRELRGSEV-FVLAEDENVRKKV---------LR---SGANFVHGDPTRVSDLEKANVR--GARAVIVDLES   81 (234)
T ss_dssp             CCHHHHHHHHHSTTSEE-EEEESCGGGHHHH---------HH---TTCEEEESCTTCHHHHHHTTCT--TCSEEEECCSC
T ss_pred             CChHHHHHHHHHHhCCe-EEEEECCHHHHHH---------Hh---cCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcCCC
Confidence            49999999999999999 9999988665211         11   4688999999999988876 66  89999987654


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus        82 d   82 (234)
T 2aef_A           82 D   82 (234)
T ss_dssp             H
T ss_pred             c
Confidence            3

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.68  E-value=0.0024  Score=53.60  Aligned_cols=91  Identities=11%  Similarity=0.066  Sum_probs=58.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|..+++.+...|.+|++++|++++....         .+.  +.. ...|..+.   +.+.+.....++|++|
T Consensus       169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA---------EKL--GAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHH--TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HHc--CCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            68999999999999999999999999986552111         111  121 12355443   3344443334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|..  .....++.++...+++.++.
T Consensus       237 ~~~G~~--~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          237 DCIGGS--YWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             ESSCGG--GHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCch--HHHHHHHhccCCCEEEEEec
Confidence            999863  45556666664446766553

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.66  E-value=0.0028  Score=52.77  Aligned_cols=91  Identities=20%  Similarity=0.277  Sum_probs=59.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++.+.. ..        .+.... ..  .|..+   .+.+.+.....++|+||
T Consensus       155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~~ga~-~~--~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IA--------KEYGAE-YL--INASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------HHTTCS-EE--EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------HHcCCc-EE--EeCCCchHHHHHHHHhCCCCceEEE
Confidence            589999999999999999999999999766522 11        111111 12  23333   23444444445799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       223 d~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (334)
T 3qwb_A          223 DSVGK--DTFEISLAALKRKGVFVSFGN  248 (334)
T ss_dssp             ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence            99985  455667777774457776653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.58  E-value=0.0026  Score=52.73  Aligned_cols=91  Identities=15%  Similarity=0.065  Sum_probs=58.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++.+.. ..        .+.... ..  .|..+.   +.+.+.....++|+||
T Consensus       147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~~Ga~-~~--~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HA--------KALGAW-ET--IDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HH--------HHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--------HHcCCC-EE--EeCCCccHHHHHHHHhCCCCceEEE
Confidence            589999999999999989999999999766521 11        111111 12  234332   3444444445799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|.  ......++.++...+++.++.
T Consensus       215 d~~g~--~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence            99985  444555666664456766653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.39  E-value=0.0011  Score=55.52  Aligned_cols=91  Identities=12%  Similarity=0.020  Sum_probs=55.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH----HHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ..        .+  .+.. ...|+.+.+    .+.++... ++|+|
T Consensus       176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~--------~~--~g~~-~~~d~~~~~~~~~~~~~~~~~-~~D~v  242 (347)
T 2hcy_A          176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LF--------RS--IGGE-VFIDFTKEKDIVGAVLKATDG-GAHGV  242 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HH--------HH--TTCC-EEEETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HH--------HH--cCCc-eEEecCccHhHHHHHHHHhCC-CCCEE
Confidence            589999999999999999999999999876531 11        11  1222 123665332    33333333 79999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |++++.. ......++.++...+++.+++
T Consensus       243 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          243 INVSVSE-AAIEASTRYVRANGTTVLVGM  270 (347)
T ss_dssp             EECSSCH-HHHHHHTTSEEEEEEEEECCC
T ss_pred             EECCCcH-HHHHHHHHHHhcCCEEEEEeC
Confidence            9998742 222333344443346776654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.37  E-value=0.0012  Score=54.40  Aligned_cols=69  Identities=25%  Similarity=0.316  Sum_probs=44.9

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~   75 (287)
                      +||+|++|..++..|+..+  .+|.++++++... .      ..++......     +++..   .+++.++++  ++|+
T Consensus         6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~-~------a~dL~~~~~~-----~~l~~~~~t~d~~~a~~--~aDv   71 (314)
T 1mld_A            6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-V------AADLSHIETR-----ATVKGYLGPEQLPDCLK--GCDV   71 (314)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-H------HHHHTTSSSS-----CEEEEEESGGGHHHHHT--TCSE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHH-H------HHHHhccCcC-----ceEEEecCCCCHHHHhC--CCCE
Confidence            5889999999999999887  7999999986221 0      0011110111     11211   234666777  9999


Q ss_pred             EEEccCCC
Q 023078           76 VYDINGRE   83 (287)
Q Consensus        76 vi~~a~~~   83 (287)
                      ||++++..
T Consensus        72 Vvi~ag~~   79 (314)
T 1mld_A           72 VVIPAGVP   79 (314)
T ss_dssp             EEECCSCC
T ss_pred             EEECCCcC
Confidence            99999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.34  E-value=0.0085  Score=49.99  Aligned_cols=92  Identities=15%  Similarity=0.189  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||+|.+|...++.+...|.+|+++++++.+.. .        ..+.... .++..+ .+ .+.+.+.....++|+||++
T Consensus       166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~--------~~~~ga~-~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-F--------VKSVGAD-IVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-H--------HHHHTCS-EEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-H--------HHhcCCc-EEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            689999999999999999999999999876521 1        1111121 222222 22 2344555444479999999


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +|..  .....++.++...+++.++.
T Consensus       235 ~g~~--~~~~~~~~l~~~G~iv~~G~  258 (342)
T 4eye_A          235 IGGP--AFDDAVRTLASEGRLLVVGF  258 (342)
T ss_dssp             CC----CHHHHHHTEEEEEEEEEC--
T ss_pred             Cchh--HHHHHHHhhcCCCEEEEEEc
Confidence            9863  45566666664457776654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.34  E-value=0.0037  Score=52.50  Aligned_cols=91  Identities=15%  Similarity=0.170  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|. +|+++++++.+....         .+ .-+.. ...|..+.   +.+.+.... ++|++
T Consensus       167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~---------~~-~~g~~-~~~d~~~~~~~~~~~~~~~~-~~d~v  234 (357)
T 2zb4_A          167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL---------TS-ELGFD-AAINYKKDNVAEQLRESCPA-GVDVY  234 (357)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---------HH-TSCCS-EEEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH---------HH-HcCCc-eEEecCchHHHHHHHHhcCC-CCCEE
Confidence            69999999999999999999 999999986542111         00 01221 12355443   234443333 69999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |+++|.  ......++.++...+++.++.
T Consensus       235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~  261 (357)
T 2zb4_A          235 FDNVGG--NISDTVISQMNENSHIILCGQ  261 (357)
T ss_dssp             EESCCH--HHHHHHHHTEEEEEEEEECCC
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEECC
Confidence            999983  344555666664457776654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.32  E-value=0.0067  Score=50.78  Aligned_cols=91  Identities=15%  Similarity=0.208  Sum_probs=59.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.... .+  .|..+.   +.+.+.....++|+|+
T Consensus       171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~~Ga~-~~--~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL---------LKDIGAA-HV--LNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH---------HHHHTCS-EE--EETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHcCCC-EE--EECCcHHHHHHHHHHhcCCCCcEEE
Confidence            5899999999999998889999999987765211         1111221 12  233332   3344443334899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|..  .....++.++...+++.++.
T Consensus       239 d~~g~~--~~~~~~~~l~~~G~iv~~G~  264 (349)
T 3pi7_A          239 DAVTGP--LASAIFNAMPKRARWIIYGR  264 (349)
T ss_dssp             ESSCHH--HHHHHHHHSCTTCEEEECCC
T ss_pred             ECCCCh--hHHHHHhhhcCCCEEEEEec
Confidence            998843  34567777876668887664

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.24  E-value=0.0034  Score=53.78  Aligned_cols=67  Identities=18%  Similarity=0.258  Sum_probs=53.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.+.|++|+++++++.......           ..++.++.||.++++.+.++ ++  ++|+||-+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-----------~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-----------KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-----------HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence            4599999999999999999999999987632211           24678899999999988877 55  8899987655


Q ss_pred             C
Q 023078           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.20  E-value=0.00085  Score=51.93  Aligned_cols=79  Identities=16%  Similarity=0.143  Sum_probs=47.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|+.++..|++.|++|++++|++++... +.    ........     ..|+. .+++.++++  ++|+||++.
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~-----~~~~~-~~~~~~~~~--~~D~Vi~~~   72 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KA----AEYRRIAG-----DASIT-GMKNEDAAE--ACDIAVLTI   72 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HH----HHHHHHHS-----SCCEE-EEEHHHHHH--HCSEEEECS
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHhccccc-----cCCCC-hhhHHHHHh--cCCEEEEeC
Confidence            4789999999999999999999999998655221 10    00000000     01111 123445566  789999987


Q ss_pred             CCCccchHHHHHhC
Q 023078           81 GREADEVEPILDAL   94 (287)
Q Consensus        81 ~~~~~~~~~l~~a~   94 (287)
                      ...  ....+++.+
T Consensus        73 ~~~--~~~~~~~~l   84 (212)
T 1jay_A           73 PWE--HAIDTARDL   84 (212)
T ss_dssp             CHH--HHHHHHHHT
T ss_pred             Chh--hHHHHHHHH
Confidence            642  234444443

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.20  E-value=0.0076  Score=50.55  Aligned_cols=90  Identities=18%  Similarity=0.177  Sum_probs=58.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.... ..  .|..+.   +.+.+.. ..++|+||
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~~--~~~~~~~~~~~~~~~~-~~g~Dvvi  240 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA---------CERLGAK-RG--INYRSEDFAAVIKAET-GQGVDIIL  240 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHHTCS-EE--EETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhcCCC-EE--EeCCchHHHHHHHHHh-CCCceEEE
Confidence            5899999999999999999999999998765221         1111122 12  233332   3344433 45899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|..  .....++.++...+++.++.
T Consensus       241 d~~g~~--~~~~~~~~l~~~G~iv~~g~  266 (353)
T 4dup_A          241 DMIGAA--YFERNIASLAKDGCLSIIAF  266 (353)
T ss_dssp             ESCCGG--GHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCHH--HHHHHHHHhccCCEEEEEEe
Confidence            999853  44556666664456665553

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.19  E-value=0.0039  Score=52.27  Aligned_cols=90  Identities=11%  Similarity=0.137  Sum_probs=57.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH---HHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+.. ..        .+  .+... ..|..+.+   .+.+.....++|+||
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~--------~~--~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IV--------LQ--NGAHE-VFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------HH--TTCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HH--------HH--cCCCE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            589999999999999999999999999866522 11        11  12221 23554433   333433334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +++|.  ......++.++...+++.++
T Consensus       245 ~~~G~--~~~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          245 EMLAN--VNLSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ECCCh--HHHHHHHHhccCCCEEEEEe
Confidence            99884  23444556666445676655

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.19  E-value=0.0061  Score=51.33  Aligned_cols=91  Identities=21%  Similarity=0.145  Sum_probs=58.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|+++++++.+... .        .+  -+...+ .|..+.   +.+.+.. ..++|+||
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--~Ga~~~-~~~~~~~~~~~~~~~~-~~g~D~vi  236 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF-L--------KS--LGCDRP-INYKTEPVGTVLKQEY-PEGVDVVY  236 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCSEE-EETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------HH--cCCcEE-EecCChhHHHHHHHhc-CCCCCEEE
Confidence            6899999999999999999999999998655211 1        11  122211 233332   2233222 23799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +++|.  ......++.++...+++.+++.
T Consensus       237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~  263 (362)
T 2c0c_A          237 ESVGG--AMFDLAVDALATKGRLIVIGFI  263 (362)
T ss_dssp             ECSCT--HHHHHHHHHEEEEEEEEECCCG
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEeCC
Confidence            99885  3455566777644578777654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.16  E-value=0.0061  Score=50.65  Aligned_cols=91  Identities=14%  Similarity=0.238  Sum_probs=56.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH----HHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+....         .+  .+.. ...|..+.+    .+.+... .++|++
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~---------~~--~g~~-~~~d~~~~~~~~~~~~~~~~-~~~d~v  218 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL---------KQ--IGFD-AAFNYKTVNSLEEALKKASP-DGYDCY  218 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HH--TTCS-EEEETTSCSCHHHHHHHHCT-TCEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------Hh--cCCc-EEEecCCHHHHHHHHHHHhC-CCCeEE
Confidence            58999999999999999999999999876552111         11  1221 224665522    2333222 369999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      |+++|.  ......++.++...+++.++..
T Consensus       219 i~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (333)
T 1v3u_A          219 FDNVGG--EFLNTVLSQMKDFGKIAICGAI  246 (333)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCCC
T ss_pred             EECCCh--HHHHHHHHHHhcCCEEEEEecc
Confidence            999984  2234444555544577766643

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.15  E-value=0.0084  Score=43.95  Aligned_cols=79  Identities=15%  Similarity=0.104  Sum_probs=52.3

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh--HHHHhhhcc----CCccEEE
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY   77 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~----~~~d~vi   77 (287)
                      +|.++...++.|.+.|.+|++..|++.... ..+. ......+.+..+..+.+|++++  +++.++++.    .+-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~-~~~~-~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKD-AHPD-EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTT-SCTT-HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCccccc-cccc-HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            678999999999999999998888654321 1100 0112222234456678899888  777666542    3449999


Q ss_pred             EccCCCc
Q 023078           78 DINGREA   84 (287)
Q Consensus        78 ~~a~~~~   84 (287)
                      ||+|...
T Consensus       103 nnAgg~r  109 (157)
T 3gxh_A          103 HCLANYR  109 (157)
T ss_dssp             ECSBSHH
T ss_pred             ECCCCCC
Confidence            9998753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.12  E-value=0.0055  Score=50.99  Aligned_cols=92  Identities=18%  Similarity=0.256  Sum_probs=57.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|++++|++.+.....        .+  .+... ..|..+.   +.+.+.. ..++|+||
T Consensus       156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~~--~g~~~-~~~~~~~~~~~~~~~~~-~~~~d~vi  223 (336)
T 4b7c_A          156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV--------EE--LGFDG-AIDYKNEDLAAGLKREC-PKGIDVFF  223 (336)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HT--TCCSE-EEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HH--cCCCE-EEECCCHHHHHHHHHhc-CCCceEEE
Confidence            699999999999999999999999999876532110        11  12211 1344443   2333333 23799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEeee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +++|.  ......++.++...+++.++..
T Consensus       224 ~~~g~--~~~~~~~~~l~~~G~iv~~G~~  250 (336)
T 4b7c_A          224 DNVGG--EILDTVLTRIAFKARIVLCGAI  250 (336)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCG
T ss_pred             ECCCc--chHHHHHHHHhhCCEEEEEeec
Confidence            99884  3344455555544577776654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.02  E-value=0.0044  Score=51.62  Aligned_cols=66  Identities=14%  Similarity=-0.011  Sum_probs=53.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+.+++.|.++|+ |++++++++...  +.          ..++.++.||.++++.+.++ ++  ++|.|+-+.+
T Consensus       122 G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~  186 (336)
T 1lnq_A          122 GWSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLE  186 (336)
T ss_dssp             SCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCS
T ss_pred             CCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCC
Confidence            359999999999999999 999998876632  21          25788999999999999877 65  8999997765


Q ss_pred             CC
Q 023078           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus       187 ~d  188 (336)
T 1lnq_A          187 SD  188 (336)
T ss_dssp             SH
T ss_pred             cc
Confidence            43

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=95.98  E-value=0.0064  Score=49.75  Aligned_cols=88  Identities=15%  Similarity=0.130  Sum_probs=56.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|.+|...++.+...|.+|+++++++.+... .        .+  .+... ..|..+.+++.+.+.  ++|+||+ +
T Consensus       132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--~ga~~-~~~~~~~~~~~~~~~--~~d~vid-~  196 (302)
T 1iz0_A          132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-P--------LA--LGAEE-AATYAEVPERAKAWG--GLDLVLE-V  196 (302)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-H--------HH--TTCSE-EEEGGGHHHHHHHTT--SEEEEEE-C
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------Hh--cCCCE-EEECCcchhHHHHhc--CceEEEE-C
Confidence            5899999999999999899999999997665211 1        11  12221 134444133344444  8999999 8


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |.  ......++.++...+++.++.
T Consensus       197 g~--~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          197 RG--KEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             SC--TTHHHHHTTEEEEEEEEEC--
T ss_pred             CH--HHHHHHHHhhccCCEEEEEeC
Confidence            75  445566666664447776654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=95.94  E-value=0.00089  Score=55.64  Aligned_cols=74  Identities=14%  Similarity=0.092  Sum_probs=43.0

Q ss_pred             CCcccchHHHHHHHHHHCCC--e-----EEEEecCCcc-ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCC
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~-----V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   72 (287)
                      |||+|++|++++..|...+.  +     ++++++++.. ..+..    ..++.......  . .+....+...+.++  +
T Consensus         9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~----a~DL~~~~~~~--~-~~~~~~~~~~~~~~--d   79 (333)
T 5mdh_A            9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGV----LMELQDCALPL--L-KDVIATDKEEIAFK--D   79 (333)
T ss_dssp             SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH----HHHHHHTCCTT--E-EEEEEESCHHHHTT--T
T ss_pred             ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhh----HhhhHhhhhcc--c-CCEEEcCCcHHHhC--C
Confidence            79999999999999988764  4     8888886421 00000    01111100011  1 12222223455676  9


Q ss_pred             ccEEEEccCCC
Q 023078           73 FDVVYDINGRE   83 (287)
Q Consensus        73 ~d~vi~~a~~~   83 (287)
                      +|+||+++|..
T Consensus        80 aDvVvitAg~p   90 (333)
T 5mdh_A           80 LDVAILVGSMP   90 (333)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEEeCCCC
Confidence            99999999863

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.80  E-value=0.0046  Score=53.82  Aligned_cols=68  Identities=16%  Similarity=0.301  Sum_probs=53.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |.|-+|++|++.|.++|++|+++++++..... +        .. .-++..+.||.++++.+.++-- .++|++|-+.+
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~-~--------~~-~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~   77 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLRE-L--------QD-KYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTN   77 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHH-H--------HH-HSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-H--------HH-hcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcC
Confidence            67999999999999999999999998766321 1        11 2367889999999999888733 28999885444

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=95.80  E-value=0.012  Score=49.15  Aligned_cols=91  Identities=13%  Similarity=0.169  Sum_probs=55.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh----HHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~d~v   76 (287)
                      +||+|.+|..+++.+...|.+|++++|++.+......        +  .+... ..|..+.    +.+.+.. ..++|+|
T Consensus       162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~--------~--~g~~~-~~d~~~~~~~~~~~~~~~-~~~~d~v  229 (345)
T 2j3h_A          162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT--------K--FGFDD-AFNYKEESDLTAALKRCF-PNGIDIY  229 (345)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------T--SCCSE-EEETTSCSCSHHHHHHHC-TTCEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------H--cCCce-EEecCCHHHHHHHHHHHh-CCCCcEE
Confidence            6999999999999999999999999998655221100        0  12211 2254432    2333332 2379999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |+++|.  ......++.++...+++.++.
T Consensus       230 i~~~g~--~~~~~~~~~l~~~G~~v~~G~  256 (345)
T 2j3h_A          230 FENVGG--KMLDAVLVNMNMHGRIAVCGM  256 (345)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCC
T ss_pred             EECCCH--HHHHHHHHHHhcCCEEEEEcc
Confidence            999874  234445555554446766553

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.60  E-value=0.032  Score=48.31  Aligned_cols=93  Identities=13%  Similarity=0.178  Sum_probs=58.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEe--cCCC----------------hH
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--DRKD----------------YD   62 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~----------------~~   62 (287)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+......+-..  |+.+                .+
T Consensus       227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~---------~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAA---------VRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            6899999999999999999999999987655211         1111122111111  1110                23


Q ss_pred             HHHhhhccCCccEEEEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           63 FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        63 ~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      .+.+.. ..++|+||+++|.  ......++.++...+++.+++
T Consensus       298 ~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  337 (447)
T 4a0s_A          298 LVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGS  337 (447)
T ss_dssp             HHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCC
T ss_pred             HHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEec
Confidence            344444 3479999999885  345566677775568887764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=95.49  E-value=0.03  Score=46.59  Aligned_cols=91  Identities=14%  Similarity=0.093  Sum_probs=57.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++++...         ..+..... .  .|..+.   +.+.+.....++|+||
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~lga~~-~--~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE---------LLRLGAAY-V--IDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHHTCSE-E--EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhCCCcE-E--EeCCcccHHHHHHHHhCCCCCcEEE
Confidence            5899999999999888889999999998765211         11112221 2  234332   3444444445899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +++|...  ....++.++...+++.++.
T Consensus       219 d~~g~~~--~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          219 DSIGGPD--GNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             ESSCHHH--HHHHHHTEEEEEEEEECCC
T ss_pred             ECCCChh--HHHHHHHhcCCCEEEEEee
Confidence            9988432  3344455554456666553

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.04  E-value=0.049  Score=45.00  Aligned_cols=89  Identities=18%  Similarity=0.174  Sum_probs=53.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh--HHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|...++.+...|.+|+++++++.+... .        .+  -+...+ .|..+.  +.+.+ +...++|+||+
T Consensus       156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~-~--------~~--lGa~~~-i~~~~~~~~~~~~-~~~~~~d~vid  222 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-L--------RV--LGAKEV-LAREDVMAERIRP-LDKQRWAAAVD  222 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-H--------HH--TTCSEE-EECC----------CCSCCEEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------HH--cCCcEE-EecCCcHHHHHHH-hcCCcccEEEE
Confidence            5899999999999998899999999998655211 1        11  122111 233332  12222 22237999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++|.  ......++.++...+++.++
T Consensus       223 ~~g~--~~~~~~~~~l~~~G~~v~~G  246 (328)
T 1xa0_A          223 PVGG--RTLATVLSRMRYGGAVAVSG  246 (328)
T ss_dssp             CSTT--TTHHHHHHTEEEEEEEEECS
T ss_pred             CCcH--HHHHHHHHhhccCCEEEEEe
Confidence            9885  34556666666445666554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.03  E-value=0.026  Score=47.56  Aligned_cols=90  Identities=13%  Similarity=0.140  Sum_probs=59.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|...++.+...|.+|+++++++.+.....        .+  -+... ..|..+.+.+.++..  ++|+||+++
T Consensus       194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~--------~~--lGa~~-v~~~~~~~~~~~~~~--~~D~vid~~  259 (366)
T 1yqd_A          194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL--------KN--FGADS-FLVSRDQEQMQAAAG--TLDGIIDTV  259 (366)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH--------HT--SCCSE-EEETTCHHHHHHTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hh--cCCce-EEeccCHHHHHHhhC--CCCEEEECC
Confidence            364 89999999999889999999998876532111        01  12221 235666666766665  899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +... .....++.++...+++.+++
T Consensus       260 g~~~-~~~~~~~~l~~~G~iv~~g~  283 (366)
T 1yqd_A          260 SAVH-PLLPLFGLLKSHGKLILVGA  283 (366)
T ss_dssp             SSCC-CSHHHHHHEEEEEEEEECCC
T ss_pred             CcHH-HHHHHHHHHhcCCEEEEEcc
Confidence            8542 24556677774457776664

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.00  E-value=0.082  Score=43.41  Aligned_cols=83  Identities=14%  Similarity=0.203  Sum_probs=54.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|++...                .++....    ..+++.++++  ++|+|+.+...
T Consensus       146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~~----~~~~l~ell~--~aDiV~l~~Pl  203 (315)
T 3pp8_A          146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESYV----GREELRAFLN--QTRVLINLLPN  203 (315)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEEE----SHHHHHHHHH--TCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhhc----ccCCHHHHHh--hCCEEEEecCC
Confidence            579999999999999999999999986541                1222111    2357778887  88999876654


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..  +  ....+..++...-+|.+|...
T Consensus       204 t~~t~~li~~~~l~~mk~gailIN~aRG~  232 (315)
T 3pp8_A          204 TAQTVGIINSELLDQLPDGAYVLNLARGV  232 (315)
T ss_dssp             CGGGTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred             chhhhhhccHHHHhhCCCCCEEEECCCCh
Confidence            322  1  134455555445566666543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=94.99  E-value=0.11  Score=42.38  Aligned_cols=93  Identities=10%  Similarity=0.039  Sum_probs=46.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC--chhhhhhcCCcEEEEecCCChHHHHhhhcc------CCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~d   74 (287)
                      |.|..|..+++.|++.||+|++.+|++++..+......  .....+......++-.-+.+...+.+.+..      ..-+
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~   91 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG   91 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence            57999999999999999999999999877433222110  001111112233333333343333222110      1345


Q ss_pred             EEEEccCCCccchHHHHHhCC
Q 023078           75 VVYDINGREADEVEPILDALP   95 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~   95 (287)
                      ++|.+....+..++.+.+.++
T Consensus        92 iiid~sT~~p~~~~~~~~~~~  112 (297)
T 4gbj_A           92 VHVSMSTISPETSRQLAQVHE  112 (297)
T ss_dssp             EEEECSCCCHHHHHHHHHHHH
T ss_pred             EEEECCCCChHHHHHHHHHHH
Confidence            667777776666666666554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=94.89  E-value=0.054  Score=45.67  Aligned_cols=92  Identities=15%  Similarity=0.095  Sum_probs=53.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.+...|.+|+++++. .+. +.        ..+  -+... ..|..+.+....+.+..++|+||+++
T Consensus       190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~-~~~-~~--------~~~--lGa~~-v~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          190 LGASGGVGTFAIQVMKAWDAHVTAVCSQ-DAS-EL--------VRK--LGADD-VIDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECG-GGH-HH--------HHH--TTCSE-EEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCh-HHH-HH--------HHH--cCCCE-EEECCchHHHHHHhhcCCCCEEEECC
Confidence            4889999999999988889999988843 331 11        111  12221 12444433222332223799999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |.........++.++...+++.+++
T Consensus       257 g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          257 GGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             CChhhhhHHHHHhhcCCcEEEEeCC
Confidence            8652222333444555557776653

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=94.86  E-value=0.041  Score=44.91  Aligned_cols=93  Identities=11%  Similarity=0.066  Sum_probs=55.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCC--CchhhhhhcCCcEEEEecCCChHHHHhhhccC--------C
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE--SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G   72 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--------~   72 (287)
                      |.|..|..+++.|++.||+|++.+|++++........  ......+......++-.-+.+.+.+.+++...        .
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~   89 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   89 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence            5689999999999999999999999987643221100  00011111233444555555666555554310        1


Q ss_pred             ccEEEEccCCCccchHHHHHhCC
Q 023078           73 FDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~a~~   95 (287)
                      =.+||.+....+..++.+.+.++
T Consensus        90 g~iiId~sT~~p~~~~~~a~~~~  112 (300)
T 3obb_A           90 GTLVLECSTIAPTSARKIHAAAR  112 (300)
T ss_dssp             -CEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            24677777777776776666654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=94.77  E-value=0.039  Score=47.92  Aligned_cols=91  Identities=12%  Similarity=0.222  Sum_probs=57.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-------------h------
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------Y------   61 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-------------~------   61 (287)
                      +||+|-+|...++.+...|.+|+++++++.+.. .+        .+.... .++  |..+             .      
T Consensus       235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~-~~--------~~lGa~-~vi--~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          235 WGASGGLGSYATQFALAGGANPICVVSSPQKAE-IC--------RAMGAE-AII--DRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------HHHTCC-EEE--ETTTTTCCSEEETTEECHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH-HH--------HhhCCc-EEE--ecCcCcccccccccccchHHHHHH
Confidence            589999999999999889999999998765521 11        111121 111  2211             1      


Q ss_pred             -HHHHhhhccCCccEEEEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           62 -DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        62 -~~~~~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                       +.+.++....++|+||+++|.  ......++.++...+++.+++
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  345 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS  345 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence             444444444589999999885  445556666664446665553

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=94.70  E-value=0.086  Score=43.08  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (287)
                      .||..|.++++.++++|++|+.+.+..+
T Consensus        63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           63 SSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            3599999999999999999999999654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=94.69  E-value=0.015  Score=48.93  Aligned_cols=91  Identities=13%  Similarity=0.196  Sum_probs=57.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|+.+++.|...|.+|++++|++.+... +.       ......+..   ...+.+.+.+.+.  ++|+||++.
T Consensus       173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~-~~-------~~~~~~~~~---~~~~~~~~~~~~~--~~DvVI~~~  238 (361)
T 1pjc_A          173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LE-------TLFGSRVEL---LYSNSAEIETAVA--EADLLIGAV  238 (361)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HH-------HHHGGGSEE---EECCHHHHHHHHH--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HH-------HhhCceeEe---eeCCHHHHHHHHc--CCCEEEECC
Confidence            466 999999999999999999999998765221 10       000112211   2234556667777  899999998


Q ss_pred             CCCcc-----chHHHHHhCCCCCcEEEEee
Q 023078           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~-----~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +....     -....++.++....++-++.
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~  268 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAV  268 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence            75321     13455666664445665553

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=94.66  E-value=0.055  Score=44.40  Aligned_cols=73  Identities=11%  Similarity=0.136  Sum_probs=49.1

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCC---ccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      +|+ |-+|+.++..|.+.|. +|++..|++   ++.. .+.    .++.. ..+..+...++.+.+++.+.+.  ++|+|
T Consensus       160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~-~la----~~~~~-~~~~~~~~~~~~~~~~l~~~l~--~aDiI  230 (315)
T 3tnl_A          160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAE-KTV----EKINS-KTDCKAQLFDIEDHEQLRKEIA--ESVIF  230 (315)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHH-HHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred             ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHH-HHH----HHhhh-hcCCceEEeccchHHHHHhhhc--CCCEE
Confidence            365 8899999999999997 899999983   3321 110    01111 1123344556777777878887  89999


Q ss_pred             EEccCC
Q 023078           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      |++...
T Consensus       231 INaTp~  236 (315)
T 3tnl_A          231 TNATGV  236 (315)
T ss_dssp             EECSST
T ss_pred             EECccC
Confidence            998654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.61  E-value=0.055  Score=45.43  Aligned_cols=92  Identities=14%  Similarity=0.184  Sum_probs=58.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      +| +|.+|...++.+...|.+|+++++++.+...         ..+.... .++.-+-.+ .+.+.++....++|+||++
T Consensus       196 ~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~vi~~~~~~~~~~v~~~~~g~g~D~vid~  264 (363)
T 3uog_A          196 QG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR---------AFALGAD-HGINRLEEDWVERVYALTGDRGADHILEI  264 (363)
T ss_dssp             ES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHTCS-EEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred             EC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH---------HHHcCCC-EEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            36 8999999999888899999999988665211         1111221 222211112 2345555554589999999


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +|  .......++.++...+++.++.
T Consensus       265 ~g--~~~~~~~~~~l~~~G~iv~~G~  288 (363)
T 3uog_A          265 AG--GAGLGQSLKAVAPDGRISVIGV  288 (363)
T ss_dssp             TT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred             CC--hHHHHHHHHHhhcCCEEEEEec
Confidence            98  3456667777775557776654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=94.57  E-value=0.069  Score=42.29  Aligned_cols=101  Identities=11%  Similarity=0.107  Sum_probs=58.8

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCc--EEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKI--LHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~d~~~~~~~~   65 (287)
                      |.|-+|+.+++.|.+.|. ++++++++.-.....-+..              ....+....+.+  +.+..++. .+.+.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~  116 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA  116 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence            468899999999999996 8999988762211000000              011222222333  44444554 45566


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~  107 (287)
                      +.++  ++|+||.+.. +...-..+.++++ ..+.+|+.+..+
T Consensus       117 ~~~~--~~DvVi~~~d-~~~~~~~l~~~~~~~~~p~i~~~~~g  156 (249)
T 1jw9_B          117 ALIA--EHDLVLDCTD-NVAVRNQLNAGCFAAKVPLVSGAAIR  156 (249)
T ss_dssp             HHHH--TSSEEEECCS-SHHHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred             HHHh--CCCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEeeecc
Confidence            7777  8999998764 3333334455555 345677665443

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=94.54  E-value=0.023  Score=47.48  Aligned_cols=89  Identities=16%  Similarity=0.249  Sum_probs=51.1

Q ss_pred             CCcccchHHHHHHHHHHCC-----C-eEEEEecCCcc---ccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-----~-~V~~l~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   71 (287)
                      .||||++|+.|++.|++++     + +++++.+..+.   .....+.     +.. ...+.+  .++ +.+    .+.  
T Consensus        15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~-----l~~-~~~~~~--~~~-~~~----~~~--   79 (352)
T 2nqt_A           15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPH-----LTP-LAHRVV--EPT-EAA----VLG--   79 (352)
T ss_dssp             ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTT-----CGG-GTTCBC--EEC-CHH----HHT--
T ss_pred             ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccc-----ccc-cceeee--ccC-CHH----Hhc--
Confidence            4999999999999999877     3 77777653321   1111110     000 011121  122 222    244  


Q ss_pred             CccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeee
Q 023078           72 GFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (287)
Q Consensus        72 ~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~  107 (287)
                      ++|+||.+.+...  ...++..++ + .++|-+|+..
T Consensus        80 ~~DvVf~alg~~~--s~~~~~~~~~G-~~vIDlSa~~  113 (352)
T 2nqt_A           80 GHDAVFLALPHGH--SAVLAQQLSPE-TLIIDCGADF  113 (352)
T ss_dssp             TCSEEEECCTTSC--CHHHHHHSCTT-SEEEECSSTT
T ss_pred             CCCEEEECCCCcc--hHHHHHHHhCC-CEEEEECCCc
Confidence            8999999887653  334444445 4 4788888765

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=94.52  E-value=0.028  Score=48.58  Aligned_cols=30  Identities=23%  Similarity=0.447  Sum_probs=28.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|++|..++..|++.|++|++++|++.+.
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            689999999999999999999999998874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.49  E-value=0.036  Score=46.17  Aligned_cols=90  Identities=17%  Similarity=0.333  Sum_probs=55.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      +||+|-+|...++.+...|.+|+++ +++.+.. .        ..+  .+...+. +-.+ .+.+.+.....++|+||++
T Consensus       157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~-~--------~~~--lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDLE-Y--------VRD--LGATPID-ASREPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH-H--------HHH--HTSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH-H--------HHH--cCCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence            4889999999999999999999998 5544421 1        111  1333322 2222 2344444444589999999


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEee
Q 023078           80 NGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +|.  ......++.++...+++.++.
T Consensus       224 ~g~--~~~~~~~~~l~~~G~iv~~g~  247 (343)
T 3gaz_A          224 LGG--PVLDASFSAVKRFGHVVSCLG  247 (343)
T ss_dssp             SCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred             CCc--HHHHHHHHHHhcCCeEEEEcc
Confidence            883  345556666664456665543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.47  E-value=0.03  Score=46.74  Aligned_cols=91  Identities=13%  Similarity=0.065  Sum_probs=56.4

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~v   76 (287)
                      +|| |.+|...++.+...|. +|+++++++.+.. ..        .+.  +... ..|..+.   +.+.++....++|+|
T Consensus       174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~--------~~~--Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRE-LA--------KKV--GADY-VINPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHH-HH--------HHH--TCSE-EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HH--------HHh--CCCE-EECCCCcCHHHHHHHHcCCCCCCEE
Confidence            488 9999999999988998 9999999865521 11        111  2221 1244332   234443333479999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |++++.. ......++.++...+++.+++
T Consensus       241 id~~g~~-~~~~~~~~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          241 LEFSGAP-KALEQGLQAVTPAGRVSLLGL  268 (348)
T ss_dssp             EECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEEcc
Confidence            9998842 334556666664457776664

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.45  E-value=0.053  Score=42.79  Aligned_cols=93  Identities=14%  Similarity=0.192  Sum_probs=57.4

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhh---ccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~d~v   76 (287)
                      +|++|.+|+.+++.+.+. ++++++.........         .+..  .+.. +-.|++.++...+.+   .+.+.++|
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~---------~~~~--~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V   73 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS---------LLTD--GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   73 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH---------HHHH--TTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH---------HHhc--cCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence            489999999999999876 899987765432211         1111  1222 456777765544433   33588999


Q ss_pred             EEccCCCccchHHHHHhCC-C-CCcEEEEee
Q 023078           77 YDINGREADEVEPILDALP-N-LEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~-~-~~~~i~~Ss  105 (287)
                      +-..|.+.+....+.++++ . ...+++.+.
T Consensus        74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N  104 (245)
T 1p9l_A           74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPN  104 (245)
T ss_dssp             ECCCCCCHHHHHHHHHHHHTSTTCEEEECSC
T ss_pred             EcCCCCCHHHHHHHHHHHHhCCCCCEEEECC
Confidence            9887877655555555555 2 334555554

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.44  E-value=0.048  Score=42.13  Aligned_cols=59  Identities=22%  Similarity=0.216  Sum_probs=41.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|+.+++.|.+.|++|++.+|++++.....           ..++...        ++.++++  ++|+||.+...
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g~~~~--------~~~~~~~--~~DvVi~av~~   93 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSAAQVT--------FQEEAVS--SPEVIFVAVFR   93 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCcee--------cHHHHHh--CCCEEEECCCh
Confidence            3899999999999999999999999866532211           1233331        2344566  89999987764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.19  E-value=0.32  Score=38.44  Aligned_cols=104  Identities=18%  Similarity=0.141  Sum_probs=59.7

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCCcEE--EEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~d~~~~~~~~   65 (287)
                      |.|-+|+++++.|...|. ++++++++.-.....-+..              ....+.+..+.+++  +..++ +.+.+.
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~  113 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL-TGEALK  113 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC-CHHHHH
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            356799999999999995 7888877543211111100              01122233344443  33333 445677


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      ++++  ++|+||.+.. +...-..+.++|. ..+.+|+.+..+.+|
T Consensus       114 ~~~~--~~DvVi~~~d-~~~~r~~l~~~~~~~~~p~i~~~~~g~~G  156 (251)
T 1zud_1          114 DAVA--RADVVLDCTD-NMATRQEINAACVALNTPLITASAVGFGG  156 (251)
T ss_dssp             HHHH--HCSEEEECCS-SHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred             HHHh--cCCEEEECCC-CHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence            7787  8999998765 3333334445555 556788776655443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.18  E-value=0.051  Score=44.78  Aligned_cols=90  Identities=17%  Similarity=0.186  Sum_probs=55.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.+...|.+|+++++++++.. .        ..+..... ++  |..+.+.+ +.+...++|+|+.+.
T Consensus       153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~-~--------~~~lGa~~-vi--~~~~~~~~-~~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHG-Y--------LKSLGANR-IL--SRDEFAES-RPLEKQLWAGAIDTV  219 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-H--------HHHHTCSE-EE--EGGGSSCC-CSSCCCCEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-H--------HHhcCCCE-EE--ecCCHHHH-HhhcCCCccEEEECC
Confidence            589999999999999989999999998876521 1        11112221 12  22222222 222234799999988


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |..  .....++.++...+++.++.
T Consensus       220 g~~--~~~~~~~~l~~~G~iv~~G~  242 (324)
T 3nx4_A          220 GDK--VLAKVLAQMNYGGCVAACGL  242 (324)
T ss_dssp             CHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             CcH--HHHHHHHHHhcCCEEEEEec
Confidence            742  44455566654456766553

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=94.13  E-value=0.017  Score=46.42  Aligned_cols=28  Identities=18%  Similarity=0.099  Sum_probs=22.5

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~   28 (287)
                      +|++|.+|+.+++.+.+. ++++++..+.
T Consensus        11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A           11 AGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            589999999999998864 7888855443

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.04  E-value=0.064  Score=44.95  Aligned_cols=30  Identities=23%  Similarity=0.393  Sum_probs=27.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|..++..|.+.|++|++.+|++.+.
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~   58 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNAV   58 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            579999999999999999999999987663

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.00  E-value=0.014  Score=50.54  Aligned_cols=29  Identities=14%  Similarity=0.351  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|..++..|.+.|++|++++|++.+
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            57999999999999999999999998765

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=93.92  E-value=0.16  Score=41.80  Aligned_cols=83  Identities=12%  Similarity=0.087  Sum_probs=53.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|+..... ...              ..+.     .+++.++++  ++|+|+.+...
T Consensus       144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-~~~--------------~~~~-----~~~l~ell~--~aDvV~l~lPl  201 (324)
T 3evt_A          144 GTGQIGQSLAAKASALGMHVIGVNTTGHPAD-HFH--------------ETVA-----FTATADALA--TANFIVNALPL  201 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSCCCCT-TCS--------------EEEE-----GGGCHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEECCCcchhH-hHh--------------hccc-----cCCHHHHHh--hCCEEEEcCCC
Confidence            5799999999999999999999999865421 110              1111     234456666  78999876654


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..    -....+..++...-+|.+|...
T Consensus       202 t~~t~~li~~~~l~~mk~gailIN~aRG~  230 (324)
T 3evt_A          202 TPTTHHLFSTELFQQTKQQPMLINIGRGP  230 (324)
T ss_dssp             CGGGTTCBSHHHHHTCCSCCEEEECSCGG
T ss_pred             chHHHHhcCHHHHhcCCCCCEEEEcCCCh
Confidence            321    1244566676555677777544

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=93.80  E-value=0.11  Score=42.28  Aligned_cols=30  Identities=23%  Similarity=0.439  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      ||.|.+|..++..|.+.|++|++++|++..
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~~   57 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDWA   57 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCccc
Confidence            579999999999999999999999987643

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.76  E-value=0.062  Score=44.29  Aligned_cols=30  Identities=27%  Similarity=0.441  Sum_probs=27.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|..++..|.+.|++|++.+|++++.
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   67 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPARA   67 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence            579999999999999999999999987763

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=93.75  E-value=0.025  Score=48.91  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|..++..|.+.|++|++++|++.+
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            58999999999999999999999998765

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=93.72  E-value=0.16  Score=42.91  Aligned_cols=91  Identities=14%  Similarity=0.119  Sum_probs=59.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|+.+++.+...|.+|++++|++.+.... .       ......+   ..+..+.+.+.+.+.  ++|+||.++
T Consensus       174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~-~-------~~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~~  239 (377)
T 2vhw_A          174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL-D-------AEFCGRI---HTRYSSAYELEGAVK--RADLVIGAV  239 (377)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H-------HHTTTSS---EEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-H-------HhcCCee---EeccCCHHHHHHHHc--CCCEEEECC
Confidence            365 9999999999999999999999987652110 0       0011222   123344566777777  899999987


Q ss_pred             CCCcc-----chHHHHHhCCCCCcEEEEee
Q 023078           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~-----~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +....     -....++.++....+|.+|.
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            64321     14556677775557777773

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=93.67  E-value=0.082  Score=44.01  Aligned_cols=91  Identities=14%  Similarity=0.201  Sum_probs=53.7

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHH---HHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~d~v   76 (287)
                      +||+|-+|..+++.+... |.+|+++++++.+... .        .+.... .  ..|..+.+.   +.+.....++|+|
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~-~--------~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-A--------KRAGAD-Y--VINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-H--------HHHTCS-E--EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-H--------HHhCCC-E--EecCCCccHHHHHHHHhcCCCceEE
Confidence            589889999999999998 9999999987655211 1        111111 1  124444332   4444321279999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |+++|.. ......++.++...+++.++
T Consensus       245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g  271 (347)
T 1jvb_A          245 IDLNNSE-KTLSVYPKALAKQGKYVMVG  271 (347)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEEC
Confidence            9998842 12222334444334666554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=93.62  E-value=0.32  Score=40.52  Aligned_cols=90  Identities=12%  Similarity=0.078  Sum_probs=56.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC----hHHHHhhhc---cCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLS---AKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~---~~~~   73 (287)
                      +|+ |-+|...++.+...|.+|+++++++.+.. ..        .+.... ..+  |..+    .+.+.+...   ..++
T Consensus       175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~--------~~lGa~-~~~--~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLE-VA--------KNCGAD-VTL--VVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------HHTTCS-EEE--ECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHH-HH--------HHhCCC-EEE--cCcccccHHHHHHHHhccccCCCC
Confidence            365 88999999988888999999988766521 11        111122 222  3332    344554442   2479


Q ss_pred             cEEEEccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           74 DVVYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |+||++++.. ......++.++...+++.++
T Consensus       242 D~vid~~g~~-~~~~~~~~~l~~~G~iv~~G  271 (352)
T 1e3j_A          242 NVTIDCSGNE-KCITIGINITRTGGTLMLVG  271 (352)
T ss_dssp             SEEEECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             CEEEECCCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            9999998742 23455677777556787665

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=93.51  E-value=0.1  Score=44.49  Aligned_cols=92  Identities=15%  Similarity=0.144  Sum_probs=56.3

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~v   76 (287)
                      +|| |-+|...++.+...|. +|+++++++.+.. .        ..+.... .++  |..+   .+.+.++....++|+|
T Consensus       220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~--------~~~lGa~-~vi--~~~~~~~~~~i~~~t~g~g~D~v  286 (404)
T 3ip1_A          220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN-L--------AKELGAD-HVI--DPTKENFVEAVLDYTNGLGAKLF  286 (404)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-H--------HHHHTCS-EEE--CTTTSCHHHHHHHHTTTCCCSEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-H--------HHHcCCC-EEE--cCCCCCHHHHHHHHhCCCCCCEE
Confidence            376 8999999998888898 8999988766521 1        1111111 122  3332   2445555554579999


Q ss_pred             EEccCCCccchHHHHHhC----CCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDAL----PNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~----~~~~~~i~~Ss  105 (287)
                      |.++|........+++++    +...+++.++.
T Consensus       287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            999886533333444444    65567776653

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=93.47  E-value=0.11  Score=42.13  Aligned_cols=80  Identities=15%  Similarity=0.027  Sum_probs=52.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+.....                .+.       ..+++.++++  ++|+|+.+...
T Consensus       129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~-------~~~~l~ell~--~aDiV~l~~P~  183 (290)
T 3gvx_A          129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN----------------VDV-------ISESPADLFR--QSDFVLIAIPL  183 (290)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSCCCTT----------------CSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccCchhHHHHHHHHhhCcEEEEEeccccccc----------------ccc-------ccCChHHHhh--ccCeEEEEeec
Confidence            5799999999999999999999999865421                111       1124455666  78988877654


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..  .  ....++.++...-+|.+|+..
T Consensus       184 t~~t~~li~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          184 TDKTRGMVNSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             CTTTTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred             cccchhhhhHHHHhhhhcCceEEEeehhc
Confidence            322  1  234556666555677666544

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.46  E-value=0.05  Score=44.06  Aligned_cols=30  Identities=30%  Similarity=0.520  Sum_probs=27.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|+.++..|.+.|++|++.+|++.+.
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKA   37 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            579999999999999999999999987763

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=93.46  E-value=0.02  Score=46.03  Aligned_cols=30  Identities=17%  Similarity=0.022  Sum_probs=26.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +|+ |.+|+.++..|.+.|.+|++..|+.++
T Consensus       125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~  154 (271)
T 1nyt_A          125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR  154 (271)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            476 679999999999999999999998765

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=93.40  E-value=0.065  Score=43.91  Aligned_cols=30  Identities=30%  Similarity=0.460  Sum_probs=27.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|..++..|.+.|++|++.+|++.+.
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   57 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKC   57 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            579999999999999999999999987763

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=93.31  E-value=0.1  Score=42.03  Aligned_cols=60  Identities=15%  Similarity=0.124  Sum_probs=42.3

Q ss_pred             ccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      +|-.|+.++..|.+.|. +|++..|+.++.. .+.           ..+..     ...+++.+++.  ++|+||++...
T Consensus       125 aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~-~la-----------~~~~~-----~~~~~~~~~~~--~aDiVInaTp~  185 (277)
T 3don_A          125 AGGASKGIANELYKIVRPTLTVANRTMSRFN-NWS-----------LNINK-----INLSHAESHLD--EFDIIINTTPA  185 (277)
T ss_dssp             CSHHHHHHHHHHHTTCCSCCEEECSCGGGGT-TCC-----------SCCEE-----ECHHHHHHTGG--GCSEEEECCC-
T ss_pred             CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHH-----------Hhccc-----ccHhhHHHHhc--CCCEEEECccC
Confidence            48899999999999998 8999999977633 222           12221     13455666676  78999998654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=93.27  E-value=0.078  Score=44.01  Aligned_cols=89  Identities=10%  Similarity=0.042  Sum_probs=55.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +|| |.+|..+++.+...|.+|+++++++.+... .        .+  .+... ..|..+.   +.+.+...  ++|+||
T Consensus       171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~--------~~--lGa~~-~~d~~~~~~~~~~~~~~~--~~d~vi  235 (339)
T 1rjw_A          171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-A--------KE--LGADL-VVNPLKEDAAKFMKEKVG--GVHAAV  235 (339)
T ss_dssp             ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-H--------HH--TTCSE-EECTTTSCHHHHHHHHHS--SEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HH--CCCCE-EecCCCccHHHHHHHHhC--CCCEEE
Confidence            478 669999999999899999999988665211 1        11  12221 2355432   23333333  899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ++++.. ......++.++...+++.++.
T Consensus       236 d~~g~~-~~~~~~~~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          236 VTAVSK-PAFQSAYNSIRRGGACVLVGL  262 (339)
T ss_dssp             ESSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCCH-HHHHHHHHHhhcCCEEEEecc
Confidence            998742 234556666664447776653

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=93.20  E-value=0.19  Score=42.44  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=47.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++.++......+             --..+..|+.|.+.+.++++  .+|+|..
T Consensus        19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~   79 (377)
T 3orq_A           19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY   79 (377)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence            5788999999999999999999987655422221             12456789999999999988  7898864

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=93.19  E-value=0.077  Score=46.24  Aligned_cols=28  Identities=21%  Similarity=0.388  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHC-CC-eEEEEecCCc
Q 023078            3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~L~~~-g~-~V~~l~r~~~   30 (287)
                      |.|++|..++..|++. |+ +|+++++++.
T Consensus        25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            6899999999999999 99 9999999988

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.15  E-value=0.023  Score=40.77  Aligned_cols=63  Identities=10%  Similarity=0.108  Sum_probs=41.5

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   83 (287)
                      +|.+|+.+++.|.+.|++|++.+|+..+... +.       ...  +....  ..   +++.+.++  ++|+||.+.+..
T Consensus        29 ~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a-------~~~--~~~~~--~~---~~~~~~~~--~~Divi~at~~~   91 (144)
T 3oj0_A           29 NGMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FA-------EKY--EYEYV--LI---NDIDSLIK--NNDVIITATSSK   91 (144)
T ss_dssp             CSHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HH-------HHH--TCEEE--EC---SCHHHHHH--TCSEEEECSCCS
T ss_pred             CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HH-------HHh--CCceE--ee---cCHHHHhc--CCCEEEEeCCCC
Confidence            5999999999999999999999998765321 10       011  12211  22   23445566  899999987754

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=93.01  E-value=0.11  Score=43.35  Aligned_cols=89  Identities=11%  Similarity=0.020  Sum_probs=48.9

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      .||||++|+.+++.|.+++ .+++++.+..+. ...+... ...+    .+..  ...+.+.+   + +.  ++|+|+.+
T Consensus        10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~-~~~~----~g~~--~~~~~~~~---~-~~--~vDvV~~a   75 (345)
T 2ozp_A           10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFV-HPNL----RGRT--NLKFVPPE---K-LE--PADILVLA   75 (345)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGT-CGGG----TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHh-Cchh----cCcc--cccccchh---H-hc--CCCEEEEc
Confidence            4899999999999999875 488887764332 1111100 0000    0100  11122222   2 44  89999998


Q ss_pred             cCCCccchHHHHHh-CC-CCCcEEEEeee
Q 023078           80 NGREADEVEPILDA-LP-NLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~l~~a-~~-~~~~~i~~Ss~  106 (287)
                      .+....  ..++.. ++ |. ++|-.|+.
T Consensus        76 ~g~~~s--~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           76 LPHGVF--AREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             CCTTHH--HHTHHHHHTTCS-EEEECSST
T ss_pred             CCcHHH--HHHHHHHHHCCC-EEEEcCcc
Confidence            876532  223322 33 54 57777774

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=92.99  E-value=0.1  Score=37.20  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=45.9

Q ss_pred             Ccc---cchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|   |.+|..+++.|++.||+|+.+..+....                .++.       -..++.++.+  .+|+++-
T Consensus        21 GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~-------~~~s~~el~~--~vDlvii   75 (138)
T 1y81_A           21 GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLK-------CYRSVRELPK--DVDVIVF   75 (138)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-------CBSSGGGSCT--TCCEEEE
T ss_pred             eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCee-------ecCCHHHhCC--CCCEEEE
Confidence            565   8999999999999999977776653221                1221       1122233333  6899887


Q ss_pred             ccCCCccchHHHHHhC-C-CCCcEEEEe
Q 023078           79 INGREADEVEPILDAL-P-NLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~-~-~~~~~i~~S  104 (287)
                      +..  ......+++.+ + +++.++..+
T Consensus        76 ~vp--~~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           76 VVP--PKVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             CSC--HHHHHHHHHHHHHTTCCEEEECT
T ss_pred             EeC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence            665  34455555443 2 666655433

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=92.99  E-value=0.0069  Score=50.42  Aligned_cols=69  Identities=12%  Similarity=0.161  Sum_probs=42.7

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhh---cCCcEEEEecCCChHHHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~d~   75 (287)
                      +|++|++|+.++..|+..|  .+|++++.+..+.....     .++...   ..++.+       ..+..++++  ++|+
T Consensus        14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a-----~DL~~~~~~~~~i~~-------t~d~~~al~--dADv   79 (343)
T 3fi9_A           14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVA-----EEIRHCGFEGLNLTF-------TSDIKEALT--DAKY   79 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHH-----HHHHHHCCTTCCCEE-------ESCHHHHHT--TEEE
T ss_pred             ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHH-----HhhhhCcCCCCceEE-------cCCHHHHhC--CCCE
Confidence            4888999999999999887  58999998765421100     001100   012211       123445676  9999


Q ss_pred             EEEccCCC
Q 023078           76 VYDINGRE   83 (287)
Q Consensus        76 vi~~a~~~   83 (287)
                      ||.++|..
T Consensus        80 VvitaG~p   87 (343)
T 3fi9_A           80 IVSSGGAP   87 (343)
T ss_dssp             EEECCC--
T ss_pred             EEEccCCC
Confidence            99999863

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=92.97  E-value=0.48  Score=39.55  Aligned_cols=94  Identities=13%  Similarity=0.099  Sum_probs=57.9

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHH----HHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF----VKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~~~~~~d~   75 (287)
                      +|| |-+|...++.+...|.+ |+++++++.+.. .        ..+....+..+..|..+.++    +.+.....++|+
T Consensus       186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~--------a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLK-F--------AKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHH-H--------HHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-H--------HHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            376 99999999988888986 889888766521 1        11111233333333333333    333333457999


Q ss_pred             EEEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           76 VYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        76 vi~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ||.+.|.. ......++.++...+++.++.
T Consensus       256 vid~~g~~-~~~~~~~~~l~~~G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGVE-SSIAAAIWAVKFGGKVFVIGV  284 (363)
T ss_dssp             EEECSCCH-HHHHHHHHHSCTTCEEEECCC
T ss_pred             EEECCCCh-HHHHHHHHHhcCCCEEEEEcc
Confidence            99998832 234566777875568876653

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=92.97  E-value=0.2  Score=43.57  Aligned_cols=86  Identities=19%  Similarity=0.252  Sum_probs=59.7

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      -|.|.+|.++++.|. ++++|.++.++..+..         .+.+..++..++.||-+|.+-+.++=- ...|+++-+.+
T Consensus       241 ~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~---------~la~~l~~~~Vi~GD~td~~~L~ee~i-~~~D~~ia~T~  309 (461)
T 4g65_A          241 VGGGNIGASLAKRLE-QTYSVKLIERNLQRAE---------KLSEELENTIVFCGDAADQELLTEENI-DQVDVFIALTN  309 (461)
T ss_dssp             ECCSHHHHHHHHHHT-TTSEEEEEESCHHHHH---------HHHHHCTTSEEEESCTTCHHHHHHTTG-GGCSEEEECCS
T ss_pred             EcchHHHHHHHHHhh-hcCceEEEecCHHHHH---------HHHHHCCCceEEeccccchhhHhhcCc-hhhcEEEEccc
Confidence            378999999999974 5699999999877632         122223678899999999988776522 27899987665


Q ss_pred             CCccchHHHHHh--CC--CCCcEE
Q 023078           82 READEVEPILDA--LP--NLEQFI  101 (287)
Q Consensus        82 ~~~~~~~~l~~a--~~--~~~~~i  101 (287)
                      ..-   .|++-+  ++  ++++.|
T Consensus       310 ~De---~Ni~~~llAk~~gv~kvI  330 (461)
T 4g65_A          310 EDE---TNIMSAMLAKRMGAKKVM  330 (461)
T ss_dssp             CHH---HHHHHHHHHHHTTCSEEE
T ss_pred             CcH---HHHHHHHHHHHcCCcccc
Confidence            432   233333  22  787776

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=92.89  E-value=0.14  Score=42.50  Aligned_cols=89  Identities=15%  Similarity=0.109  Sum_probs=55.0

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~v   76 (287)
                      +|| |-+|...++.+...|. +|+++++++.+.. ....         .  .. .-.|..+.   +.+.++. ..++|+|
T Consensus       171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~~---------l--a~-~v~~~~~~~~~~~~~~~~-~~g~D~v  235 (343)
T 2dq4_A          171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA-FARP---------Y--AD-RLVNPLEEDLLEVVRRVT-GSGVEVL  235 (343)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG-GGTT---------T--CS-EEECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHH---------h--HH-hccCcCccCHHHHHHHhc-CCCCCEE
Confidence            478 9999999999888998 9999999866522 1110         1  11 11243332   2333332 3479999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |+++|.. ......++.++...+++.++.
T Consensus       236 id~~g~~-~~~~~~~~~l~~~G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGNE-AAIHQGLMALIPGGEARILGI  263 (343)
T ss_dssp             EECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9998742 234556666664447776653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=92.82  E-value=0.24  Score=40.15  Aligned_cols=83  Identities=17%  Similarity=0.188  Sum_probs=54.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+..+... .        .  ..++..+     +.+++.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-~--------~--~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  223 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLAR-I--------A--EMGMEPF-----HISKAAQELR--DVDVCINTIPA  223 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------H--HTTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H--------H--HCCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence            46999999999999999999999998654211 0        1  1133322     1234666677  89999988765


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .... ...++.++....+|.++
T Consensus       224 ~~i~-~~~l~~mk~~~~lin~a  244 (293)
T 3d4o_A          224 LVVT-ANVLAEMPSHTFVIDLA  244 (293)
T ss_dssp             CCBC-HHHHHHSCTTCEEEECS
T ss_pred             HHhC-HHHHHhcCCCCEEEEec
Confidence            4332 24566676445565554

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=92.82  E-value=0.18  Score=41.47  Aligned_cols=82  Identities=13%  Similarity=0.082  Sum_probs=51.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|+.....                ...-.    ....++.++++  ++|+|+.+...
T Consensus       147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~----~~~~~l~ell~--~aDvV~l~lPl  204 (324)
T 3hg7_A          147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRERA----------------GFDQV----YQLPALNKMLA--QADVIVSVLPA  204 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCT----------------TCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHhCCCEEEEEcCChHHhh----------------hhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence            6799999999999999999999999864311                11000    12355677787  89999977654


Q ss_pred             CccchHH-----HHHhCCCCCcEEEEeeee
Q 023078           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~~~~~-----l~~a~~~~~~~i~~Ss~~  107 (287)
                      +.. +..     .+..++...-+|.+|...
T Consensus       205 t~~-T~~li~~~~l~~mk~gailIN~aRG~  233 (324)
T 3hg7_A          205 TRE-THHLFTASRFEHCKPGAILFNVGRGN  233 (324)
T ss_dssp             CSS-STTSBCTTTTTCSCTTCEEEECSCGG
T ss_pred             CHH-HHHHhHHHHHhcCCCCcEEEECCCch
Confidence            322 122     223333344566666544

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=92.81  E-value=0.047  Score=45.12  Aligned_cols=89  Identities=18%  Similarity=0.226  Sum_probs=51.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh--HHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|...++.+...|.+|+++++++.+.. .        ..+.... .++  |..+.  +.+.+ +...++|+||+
T Consensus       157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~--------~~~lGa~-~v~--~~~~~~~~~~~~-~~~~~~d~vid  223 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAAD-Y--------LKQLGAS-EVI--SREDVYDGTLKA-LSKQQWQGAVD  223 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH-H--------HHHHTCS-EEE--EHHHHCSSCCCS-SCCCCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-H--------HHHcCCc-EEE--ECCCchHHHHHH-hhcCCccEEEE
Confidence            488999999999988888999999999865521 1        1111111 122  22111  11111 22237999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++|.  ......++.++...+++.++
T Consensus       224 ~~g~--~~~~~~~~~l~~~G~iv~~G  247 (330)
T 1tt7_A          224 PVGG--KQLASLLSKIQYGGSVAVSG  247 (330)
T ss_dssp             SCCT--HHHHHHHTTEEEEEEEEECC
T ss_pred             CCcH--HHHHHHHHhhcCCCEEEEEe
Confidence            9885  23444455555444666554

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.80  E-value=0.045  Score=44.31  Aligned_cols=30  Identities=30%  Similarity=0.469  Sum_probs=27.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|+.++..|.+.|++|++.+|++.+.
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAKC   37 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGGG
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            589999999999999999999999987763

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=92.71  E-value=0.051  Score=45.57  Aligned_cols=26  Identities=15%  Similarity=0.374  Sum_probs=20.4

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEe
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFT   26 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~   26 (287)
                      .||||++|..|++.|.++++   ++..+.
T Consensus         8 vGATG~vG~eLlrlL~~~~~p~~el~~~a   36 (366)
T 3pwk_A            8 VGATGAVGAQMIKMLEESTLPIDKIRYLA   36 (366)
T ss_dssp             ETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred             ECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence            49999999999998888755   344444

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=92.66  E-value=0.17  Score=41.94  Aligned_cols=81  Identities=17%  Similarity=0.075  Sum_probs=50.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|++...                .+...       ..++.++++  ++|+|+.+...
T Consensus       178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~-------~~sl~ell~--~aDvVil~vP~  232 (340)
T 4dgs_A          178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWIA-------HQSPVDLAR--DSDVLAVCVAA  232 (340)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCcee-------cCCHHHHHh--cCCEEEEeCCC
Confidence            569999999999999999999999876541                11111       124556676  88999876553


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeeeeE
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~~  108 (287)
                      +..  .  ....+..++....+|.+|...+
T Consensus       233 t~~t~~li~~~~l~~mk~gailIN~aRG~v  262 (340)
T 4dgs_A          233 SAATQNIVDASLLQALGPEGIVVNVARGNV  262 (340)
T ss_dssp             --------CHHHHHHTTTTCEEEECSCC--
T ss_pred             CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence            321  1  2345566665556777776554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=92.53  E-value=0.1  Score=43.70  Aligned_cols=90  Identities=18%  Similarity=0.172  Sum_probs=56.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|...++.+...|.+|+++++++.+......        +.... .+  .|..+.+.+.++..  ++|+||+++
T Consensus       187 ~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~--------~lGa~-~v--i~~~~~~~~~~~~~--g~D~vid~~  252 (357)
T 2cf5_A          187 LGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ--------DLGAD-DY--VIGSDQAKMSELAD--SLDYVIDTV  252 (357)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT--------TSCCS-CE--EETTCHHHHHHSTT--TEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH--------HcCCc-ee--eccccHHHHHHhcC--CCCEEEECC
Confidence            364 889999999888889999999998765321110        01111 11  24455566666554  899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |.. ......++.++...+++.++.
T Consensus       253 g~~-~~~~~~~~~l~~~G~iv~~G~  276 (357)
T 2cf5_A          253 PVH-HALEPYLSLLKLDGKLILMGV  276 (357)
T ss_dssp             CSC-CCSHHHHTTEEEEEEEEECSC
T ss_pred             CCh-HHHHHHHHHhccCCEEEEeCC
Confidence            853 223445566664446666553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=92.42  E-value=0.046  Score=44.22  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|.+|+.++..|.+.|++|++.+|+++.
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            56999999999999999999999998765

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=92.41  E-value=0.25  Score=42.12  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=47.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++ .+......+.           .....+.+++.|.+.+.++.+  .+|+|+.
T Consensus        31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~   92 (403)
T 3k5i_A           31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA   92 (403)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence            468999999999999999999999 6544222221           122456789999999999998  7888874

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=92.39  E-value=0.34  Score=40.26  Aligned_cols=81  Identities=16%  Similarity=0.150  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|...|.+|++.+|+.....   .           ..+.+     .   ++.++++  ++|+|+.+...
T Consensus       155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~-----------~~~~~-----~---~l~ell~--~aDvV~l~~Pl  210 (343)
T 2yq5_A          155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---E-----------PFLTY-----T---DFDTVLK--EADIVSLHTPL  210 (343)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG---T-----------TTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ecCHHHHHHHHHHhhCCCEEEEECCChhhhh---h-----------ccccc-----c---CHHHHHh--cCCEEEEcCCC
Confidence            5799999999999999999999999875411   0           12221     1   3455666  78999877654


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..    -....+..++...-+|.+|+..
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~aRg~  239 (343)
T 2yq5_A          211 FPSTENMIGEKQLKEMKKSAYLINCARGE  239 (343)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred             CHHHHHHhhHHHHhhCCCCcEEEECCCCh
Confidence            322    1244566677556777777654

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=92.37  E-value=0.076  Score=42.60  Aligned_cols=29  Identities=14%  Similarity=0.162  Sum_probs=23.4

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEE-ecCC
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l-~r~~   29 (287)
                      +||+|.+|+.+++.+.+. +.++++. +|+.
T Consensus        13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A           13 AGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            589999999999999876 5787774 5554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=92.32  E-value=0.25  Score=40.18  Aligned_cols=83  Identities=16%  Similarity=0.234  Sum_probs=53.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+..+... +        .+  .+++.+     +.+++.++++  ++|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~-~--------~~--~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLAR-I--------TE--MGLVPF-----HTDELKEHVK--DIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCEEE-----EGGGHHHHST--TCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------HH--CCCeEE-----chhhHHHHhh--CCCEEEECCCh
Confidence            46999999999999999999999998654211 0        01  133322     1234666777  89999988776


Q ss_pred             CccchHHHHHhCCCCCcEEEEe
Q 023078           83 EADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .... ...++.++....+|.++
T Consensus       226 ~~i~-~~~~~~mk~g~~lin~a  246 (300)
T 2rir_A          226 MILN-QTVLSSMTPKTLILDLA  246 (300)
T ss_dssp             CCBC-HHHHTTSCTTCEEEECS
T ss_pred             hhhC-HHHHHhCCCCCEEEEEe
Confidence            4332 23455565444555554

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=92.32  E-value=0.068  Score=44.92  Aligned_cols=87  Identities=22%  Similarity=0.291  Sum_probs=54.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCC---ccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~   75 (287)
                      +|| |-+|..+++.+...|.+|+++++++   .+. +..        .+  -+...+  | .+  .+.+.+ .. .++|+
T Consensus       187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------~~--~ga~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVI--------EE--TKTNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHH--------HH--HTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHH--------HH--hCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence            488 9999999999988899999999987   442 111        11  133433  4 33  233433 22 37999


Q ss_pred             EEEccCCCccch-HHHHHhCCCCCcEEEEee
Q 023078           76 VYDINGREADEV-EPILDALPNLEQFIYCSS  105 (287)
Q Consensus        76 vi~~a~~~~~~~-~~l~~a~~~~~~~i~~Ss  105 (287)
                      ||+++|... .. ...++.++...+++.++.
T Consensus       250 vid~~g~~~-~~~~~~~~~l~~~G~iv~~g~  279 (366)
T 2cdc_A          250 IIDATGADV-NILGNVIPLLGRNGVLGLFGF  279 (366)
T ss_dssp             EEECCCCCT-HHHHHHGGGEEEEEEEEECSC
T ss_pred             EEECCCChH-HHHHHHHHHHhcCCEEEEEec
Confidence            999988532 23 445555553346666553

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=92.24  E-value=0.073  Score=44.25  Aligned_cols=27  Identities=26%  Similarity=0.463  Sum_probs=21.1

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEec
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r   27 (287)
                      .||||++|..|++.|.++.+   ++..+..
T Consensus         7 vGatG~vG~el~~lL~~h~fp~~el~~~~s   36 (344)
T 3tz6_A            7 VGATGQVGQVMRTLLDERDFPASAVRFFAS   36 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCCceEEEEEEC
Confidence            49999999999999888743   4555543

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=92.22  E-value=0.79  Score=38.69  Aligned_cols=61  Identities=15%  Similarity=0.156  Sum_probs=46.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++.++......+             --..+..++.|.+.+.++++  .+|+|..
T Consensus        21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvI~~   81 (389)
T 3q2o_A           21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------------ADIEIVASYDDLKAIQHLAE--ISDVVTY   81 (389)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------------CSEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------------CCceEecCcCCHHHHHHHHH--hCCEeee
Confidence            5678999999999999999999987654422111             11345678889999999998  7898854

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=92.16  E-value=0.089  Score=44.08  Aligned_cols=91  Identities=22%  Similarity=0.332  Sum_probs=50.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      .||+|++|+.+++.|.+++ .+++++.+..+. ...+.    .....+ .+..  ..|+.-.+  .+.++  ++|+||.+
T Consensus        22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~----~~~~~~-~~~v--~~dl~~~~--~~~~~--~vDvVf~a   89 (359)
T 1xyg_A           22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSME----SVFPHL-RAQK--LPTLVSVK--DADFS--TVDAVFCC   89 (359)
T ss_dssp             ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHH----HHCGGG-TTSC--CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred             ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHH----HhCchh-cCcc--cccceecc--hhHhc--CCCEEEEc
Confidence            4899999999999999875 488888765322 11110    000000 1110  12332222  33455  89999998


Q ss_pred             cCCCccchHHHHHhCC-CCCcEEEEeee
Q 023078           80 NGREADEVEPILDALP-NLEQFIYCSSA  106 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~-~~~~~i~~Ss~  106 (287)
                      .+....  ......++ |. ++|-.|+.
T Consensus        90 tp~~~s--~~~a~~~~aG~-~VId~sa~  114 (359)
T 1xyg_A           90 LPHGTT--QEIIKELPTAL-KIVDLSAD  114 (359)
T ss_dssp             CCTTTH--HHHHHTSCTTC-EEEECSST
T ss_pred             CCchhH--HHHHHHHhCCC-EEEECCcc
Confidence            865432  23333335 44 57777764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=92.14  E-value=0.092  Score=42.42  Aligned_cols=71  Identities=11%  Similarity=0.076  Sum_probs=44.8

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|+ |-+|+.++..|.+.|. +|++.+|+.++..+..     ..+......+.+...++   +++.+.+.  ++|+||++
T Consensus       133 lGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la-----~~~~~~~~~~~i~~~~~---~~l~~~l~--~~DiVIna  201 (283)
T 3jyo_A          133 VGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA-----DVINNAVGREAVVGVDA---RGIEDVIA--AADGVVNA  201 (283)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHH-----HHHHHHHTSCCEEEECS---TTHHHHHH--HSSEEEEC
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEcCH---HHHHHHHh--cCCEEEEC
Confidence            365 8899999999999997 7999999876632211     11111112233333343   33445566  78999998


Q ss_pred             cCC
Q 023078           80 NGR   82 (287)
Q Consensus        80 a~~   82 (287)
                      ...
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            754

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=92.13  E-value=0.15  Score=40.46  Aligned_cols=61  Identities=10%  Similarity=0.088  Sum_probs=42.3

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|..|++++..|.+.|. +|++..|+.++.. .+.           ......  .   .+++.+.++  ++|+||++..
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~-~la-----------~~~~~~--~---~~~~~~~~~--~aDiVInatp  175 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAK-ALD-----------FPVKIF--S---LDQLDEVVK--KAKSLFNTTS  175 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHH-TCC-----------SSCEEE--E---GGGHHHHHH--TCSEEEECSS
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHH-----------HHcccC--C---HHHHHhhhc--CCCEEEECCC
Confidence            458899999999999997 8999999877633 232           112111  1   234555666  8999999764


Q ss_pred             C
Q 023078           82 R   82 (287)
Q Consensus        82 ~   82 (287)
                      .
T Consensus       176 ~  176 (253)
T 3u62_A          176 V  176 (253)
T ss_dssp             T
T ss_pred             C
Confidence            3

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=92.10  E-value=0.36  Score=43.08  Aligned_cols=65  Identities=14%  Similarity=0.180  Sum_probs=52.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-+|+++++.|.+.|++|+++++++....+              .. .++.||.+|++.+.++-- .++|.+|-+.+.
T Consensus       355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~--------------~~-~~i~gD~t~~~~L~~agi-~~ad~vi~~~~~  418 (565)
T 4gx0_A          355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCN--------------DH-VVVYGDATVGQTLRQAGI-DRASGIIVTTND  418 (565)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC--------------SS-CEEESCSSSSTHHHHHTT-TSCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECChHHHhh--------------cC-CEEEeCCCCHHHHHhcCc-cccCEEEEECCC
Confidence            45899999999999999999999999876321              11 688999999988877643 489999977765


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus       419 d  419 (565)
T 4gx0_A          419 D  419 (565)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=92.08  E-value=0.32  Score=37.25  Aligned_cols=26  Identities=23%  Similarity=0.381  Sum_probs=23.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (287)
                      |.|.+|+.++..|.+.|++|++.+|+
T Consensus        26 G~G~mG~~la~~l~~~g~~V~~~~~~   51 (209)
T 2raf_A           26 GKGNMGQAIGHNFEIAGHEVTYYGSK   51 (209)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            48999999999999999999999876

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=92.06  E-value=0.87  Score=37.96  Aligned_cols=100  Identities=13%  Similarity=0.117  Sum_probs=59.5

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCC--------------CchhhhhhcCC--cEEEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~--------------~~~~~~~~~~~--~~~~~~d~~~~~~~~   65 (287)
                      |.|-+|+.++..|...|. ++++++++.-.....-+..              ....+.+..+.  ++.+..++.+...+.
T Consensus       125 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~  204 (353)
T 3h5n_A          125 GCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLH  204 (353)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGG
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhh
Confidence            457899999999999984 8888888653211111100              11222333344  455556666555455


Q ss_pred             hhhccCCccEEEEccCCCccchHH-HHHhCC-CCCcEEEEeee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSA  106 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~-l~~a~~-~~~~~i~~Ss~  106 (287)
                      + ++  ++|+||.+.. +...++. +.++|. ..+.+|+.+..
T Consensus       205 ~-~~--~~DlVvd~~D-n~~~~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          205 K-VP--EADIWVVSAD-HPFNLINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             G-SC--CCSEEEECCC-CSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             H-hc--cCCEEEEecC-ChHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            6 76  8999998753 3332444 445565 55677776543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=92.05  E-value=0.36  Score=40.55  Aligned_cols=89  Identities=15%  Similarity=0.153  Sum_probs=55.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.+.+.++..  ++|+||+++
T Consensus       201 ~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~---------a~~l--Ga~~-vi~~~~~~~~~~~~~--g~Dvvid~~  265 (369)
T 1uuf_A          201 VGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA---------AKAL--GADE-VVNSRNADEMAAHLK--SFDFILNTV  265 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHH--TCSE-EEETTCHHHHHTTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcE-EeccccHHHHHHhhc--CCCEEEECC
Confidence            366 779999999888889999999988765211         1111  2211 135555554554443  899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +.. ......++.++...+++.++.
T Consensus       266 g~~-~~~~~~~~~l~~~G~iv~~G~  289 (369)
T 1uuf_A          266 AAP-HNLDDFTTLLKRDGTMTLVGA  289 (369)
T ss_dssp             SSC-CCHHHHHTTEEEEEEEEECCC
T ss_pred             CCH-HHHHHHHHHhccCCEEEEecc
Confidence            853 234455666664446766553

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=92.05  E-value=0.79  Score=35.98  Aligned_cols=98  Identities=12%  Similarity=0.132  Sum_probs=54.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEE-EecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhh-ccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~d~vi~   78 (287)
                      +|+ |.+|+.+++.+.+.+.++++ ++|+... ....+..  ..+.+.. ...+ -.|++.++...+.+ .+.+..+|+.
T Consensus         9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~-~~gv~v~--~dl~~l~-~~DV-vIDft~p~a~~~~~~l~~g~~vVig   82 (243)
T 3qy9_A            9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKA-TTPYQQY--QHIADVK-GADV-AIDFSNPNLLFPLLDEDFHLPLVVA   82 (243)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC---CCSCBC--SCTTTCT-TCSE-EEECSCHHHHHHHHTSCCCCCEEEC
T ss_pred             ECc-CHHHHHHHHHHHhCCCEEEEEEecCccc-cCCCcee--CCHHHHh-CCCE-EEEeCChHHHHHHHHHhcCCceEeC
Confidence            477 99999999999988667776 4555432 1011100  0001111 2222 35777776655544 2346788887


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ..|........+.++++. ..+++.+.
T Consensus        83 TTG~s~e~~~~l~~aa~~-~~v~~a~N  108 (243)
T 3qy9_A           83 TTGEKEKLLNKLDELSQN-MPVFFSAN  108 (243)
T ss_dssp             CCSSHHHHHHHHHHHTTT-SEEEECSS
T ss_pred             CCCCCHHHHHHHHHHHhc-CCEEEECC
Confidence            777665555556666654 34444443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=92.04  E-value=0.099  Score=43.54  Aligned_cols=90  Identities=11%  Similarity=0.147  Sum_probs=54.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|...++.+...|.+|+++++++.+.. .        ..+.... .++  |..+  .+.+.+. ...++|+|++
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~--------~~~lGa~-~vi--~~~~~~~~~~~~~-~~~g~Dvv~d  223 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETIE-W--------TKKMGAD-IVL--NHKESLLNQFKTQ-GIELVDYVFC  223 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHH-H--------HHHHTCS-EEE--CTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-H--------HHhcCCc-EEE--ECCccHHHHHHHh-CCCCccEEEE
Confidence            489999999999999989999999999765521 1        1111111 122  2222  2344443 3347999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +++.. ......++.++...+++.++
T Consensus       224 ~~g~~-~~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          224 TFNTD-MYYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             SSCHH-HHHHHHHHHEEEEEEEEESS
T ss_pred             CCCch-HHHHHHHHHhccCCEEEEEC
Confidence            88732 22345566666444666443

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=91.96  E-value=0.23  Score=41.65  Aligned_cols=89  Identities=12%  Similarity=0.111  Sum_probs=54.6

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+.. .|.+|+++++++.+.. .+        .+  .+...+ .|..+  .+.+.++ ...++|+||
T Consensus       178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~-~~--------~~--lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvi  244 (363)
T 4dvj_A          178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQE-WV--------KS--LGAHHV-IDHSKPLAAEVAAL-GLGAPAFVF  244 (363)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HH--------HH--TTCSEE-ECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-HH--------HH--cCCCEE-EeCCCCHHHHHHHh-cCCCceEEE
Confidence            48899999998887776 5899999999866521 11        11  122211 23322  2333333 334799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEE
Q 023078           78 DINGREADEVEPILDALPNLEQFIYC  103 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~  103 (287)
                      .++|.. ......++.++...+++.+
T Consensus       245 d~~g~~-~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          245 STTHTD-KHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ECSCHH-HHHHHHHHHSCTTCEEEEC
T ss_pred             ECCCch-hhHHHHHHHhcCCCEEEEE
Confidence            988732 2345567777755677765

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=91.91  E-value=0.18  Score=43.27  Aligned_cols=61  Identities=16%  Similarity=0.122  Sum_probs=47.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+.+++.+.+.|++|++++.++......+             --+.+..|+.|.+.+.++.+  ++|+|+.
T Consensus        42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~a~--~~D~V~~  102 (419)
T 4e4t_A           42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV-------------ADRHLRAAYDDEAALAELAG--LCEAVST  102 (419)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH-------------SSEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhh-------------CCEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence            5689999999999999999999986654422111             12355688899999999987  8999984

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=91.88  E-value=0.37  Score=39.44  Aligned_cols=77  Identities=17%  Similarity=0.093  Sum_probs=49.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+..+.                .      .+.   .++.++++  ++|+|+.+...
T Consensus       151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~----------------~------~~~---~~l~ell~--~aDvV~l~~p~  203 (311)
T 2cuk_A          151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL----------------P------YPF---LSLEELLK--EADVVSLHTPL  203 (311)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------S------SCB---CCHHHHHH--HCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHHCCCEEEEECCCCccc----------------c------ccc---CCHHHHHh--hCCEEEEeCCC
Confidence            579999999999999999999999876541                1      112   23445566  78888876544


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeee
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +..  .  ....+..++....+|.+|+.
T Consensus       204 ~~~t~~li~~~~l~~mk~ga~lin~srg  231 (311)
T 2cuk_A          204 TPETHRLLNRERLFAMKRGAILLNTARG  231 (311)
T ss_dssp             CTTTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             ChHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence            321  1  12344555544556666653

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=91.70  E-value=0.16  Score=42.83  Aligned_cols=91  Identities=12%  Similarity=0.093  Sum_probs=55.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC---Ch---HHHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK---DY---DFVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~---~~~~~~~~~~~~   73 (287)
                      +| +|-+|...++.+...| .+|+++++++.+.. ..        .+  -+...+ .|..   +.   +.+.++....++
T Consensus       202 ~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~--------~~--lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          202 QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK-LA--------EE--IGADLT-LNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HH--------HH--TTCSEE-EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH-HH--------HH--cCCcEE-EeccccCcchHHHHHHHHhCCCCC
Confidence            36 7999999999888889 69999998876521 11        11  122211 2333   22   233333333479


Q ss_pred             cEEEEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      |+||+++|.. ......++.++...+++.++.
T Consensus       269 Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~G~  299 (380)
T 1vj0_A          269 DFILEATGDS-RALLEGSELLRRGGFYSVAGV  299 (380)
T ss_dssp             EEEEECSSCT-THHHHHHHHEEEEEEEEECCC
T ss_pred             cEEEECCCCH-HHHHHHHHHHhcCCEEEEEec
Confidence            9999998843 234556667764456766553

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=91.63  E-value=0.42  Score=40.19  Aligned_cols=90  Identities=9%  Similarity=0.090  Sum_probs=56.7

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC----C-hHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----D-YDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~~~~~~~d   74 (287)
                      +|+ |-+|...++.+...|. +|+++++++.+.. ..        .+  -+... ..|..    + .+.+.++... ++|
T Consensus       200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a--------~~--lGa~~-vi~~~~~~~~~~~~i~~~~~g-g~D  265 (378)
T 3uko_A          200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TA--------KK--FGVNE-FVNPKDHDKPIQEVIVDLTDG-GVD  265 (378)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HH--------HT--TTCCE-EECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HH--------HH--cCCcE-EEccccCchhHHHHHHHhcCC-CCC
Confidence            366 8899999998888898 8999998877632 11        11  12221 12332    1 2445554444 899


Q ss_pred             EEEEccCCCccchHHHHHhCCC-CCcEEEEee
Q 023078           75 VVYDINGREADEVEPILDALPN-LEQFIYCSS  105 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~~-~~~~i~~Ss  105 (287)
                      +||.++|.. ......++.++. ..+++.++.
T Consensus       266 ~vid~~g~~-~~~~~~~~~l~~g~G~iv~~G~  296 (378)
T 3uko_A          266 YSFECIGNV-SVMRAALECCHKGWGTSVIVGV  296 (378)
T ss_dssp             EEEECSCCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCCH-HHHHHHHHHhhccCCEEEEEcc
Confidence            999998842 234556677774 478877663

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=91.62  E-value=0.11  Score=42.93  Aligned_cols=71  Identities=15%  Similarity=0.124  Sum_probs=42.8

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +|+ |.+|+.++..|+..+.  +++++++++.+.......  ......+..++.+..+|       .+.++  ++|+||.
T Consensus        15 iGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~D--L~~~~~~~~~~~i~~~~-------~~a~~--~aDiVvi   82 (326)
T 3vku_A           15 VGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAID--LEDALPFTSPKKIYSAE-------YSDAK--DADLVVI   82 (326)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHH--HHTTGGGSCCCEEEECC-------GGGGT--TCSEEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhh--HhhhhhhcCCcEEEECc-------HHHhc--CCCEEEE
Confidence            464 9999999999998875  899999976542210000  00000011234443322       23466  9999999


Q ss_pred             ccCCC
Q 023078           79 INGRE   83 (287)
Q Consensus        79 ~a~~~   83 (287)
                      ++|..
T Consensus        83 ~ag~~   87 (326)
T 3vku_A           83 TAGAP   87 (326)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99864

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=91.61  E-value=0.069  Score=43.94  Aligned_cols=27  Identities=7%  Similarity=-0.068  Sum_probs=25.4

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCC
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~   29 (287)
                      |.|.+|..++..|.+.| ++|++.+|++
T Consensus        31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           31 GFGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            57999999999999999 9999999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=91.59  E-value=0.39  Score=44.79  Aligned_cols=89  Identities=16%  Similarity=0.118  Sum_probs=57.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi   77 (287)
                      .||+|-+|...++.+...|.+|++++++++.  +.+..         ... .++  |..+   .+.+.+.....++|+|+
T Consensus       352 ~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~--~~l~l---------ga~-~v~--~~~~~~~~~~i~~~t~g~GvDvVl  417 (795)
T 3slk_A          352 HSAAGGVGMAAIQLARHLGAEVYATASEDKW--QAVEL---------SRE-HLA--SSRTCDFEQQFLGATGGRGVDVVL  417 (795)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCCEEEECCGGGG--GGSCS---------CGG-GEE--CSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred             ecCCCHHHHHHHHHHHHcCCEEEEEeChHHh--hhhhc---------Chh-hee--ecCChhHHHHHHHHcCCCCeEEEE
Confidence            4889999999999988889999999876522  11110         111 111  3333   23444444456899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ++.+.  ......++.++...+||.++.
T Consensus       418 d~~gg--~~~~~~l~~l~~~Gr~v~iG~  443 (795)
T 3slk_A          418 NSLAG--EFADASLRMLPRGGRFLELGK  443 (795)
T ss_dssp             ECCCT--TTTHHHHTSCTTCEEEEECCS
T ss_pred             ECCCc--HHHHHHHHHhcCCCEEEEecc
Confidence            98764  344566677776668887653

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=91.53  E-value=0.16  Score=41.71  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=24.9

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCC
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK   29 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~   29 (287)
                      |.|.+|..++..|.+.|+ +|++.+|++
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            579999999999999999 999999974

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=91.46  E-value=0.17  Score=42.94  Aligned_cols=89  Identities=16%  Similarity=0.127  Sum_probs=55.8

Q ss_pred             CcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC----hHHHHhhhccCCccEE
Q 023078            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~d~v   76 (287)
                      |+ |-+|...++.+...|. +|+++++++.+... .        .+  -+...+  |..+    .+.+.+.....++|+|
T Consensus       193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a--------~~--lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL-L--------SD--AGFETI--DLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-H--------HT--TTCEEE--ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-H--------HH--cCCcEE--cCCCcchHHHHHHHHhCCCCCCEE
Confidence            65 9999999988887898 89999988765221 1        11  233433  4433    3445554443479999


Q ss_pred             EEccCCCc-------------cchHHHHHhCCCCCcEEEEe
Q 023078           77 YDINGREA-------------DEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        77 i~~a~~~~-------------~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |.+++...             ......++.++...+++.++
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G  299 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG  299 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence            99988642             13455666666434666554

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=91.37  E-value=0.13  Score=42.66  Aligned_cols=86  Identities=19%  Similarity=0.171  Sum_probs=46.2

Q ss_pred             CCcccchHHHHHHHHHHCCC---eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      .||||++|+.+++.|.++++   +++++....+. .+.+.          ..+..+...+. +++    .+.  ++|+||
T Consensus        12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~~----------~~g~~i~~~~~-~~~----~~~--~~DvV~   73 (340)
T 2hjs_A           12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG----------FAESSLRVGDV-DSF----DFS--SVGLAF   73 (340)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE----------ETTEEEECEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCccc----------cCCcceEEecC-CHH----Hhc--CCCEEE
Confidence            48999999999999997654   55665432111 00000          01111111122 121    244  899999


Q ss_pred             EccCCCccchHHHHHhCC--CCCcEEEEeeee
Q 023078           78 DINGREADEVEPILDALP--NLEQFIYCSSAG  107 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~--~~~~~i~~Ss~~  107 (287)
                      .+.+...  ....+..+.  ++ ++|.+|+..
T Consensus        74 ~a~g~~~--s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           74 FAAAAEV--SRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             ECSCHHH--HHHHHHHHHHTTC-EEEETTCTT
T ss_pred             EcCCcHH--HHHHHHHHHHCCC-EEEEeCCCC
Confidence            9877432  334444433  55 467777654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=91.27  E-value=0.39  Score=40.39  Aligned_cols=28  Identities=14%  Similarity=0.308  Sum_probs=20.7

Q ss_pred             CCcccchHHHHHH-HHHHCC---CeEEEEecC
Q 023078            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~-~L~~~g---~~V~~l~r~   28 (287)
                      .||||++|+.|++ .|.++.   .++..++.+
T Consensus        10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~   41 (377)
T 3uw3_A           10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS   41 (377)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCceEEEEEech
Confidence            4999999999999 666655   356666543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=91.19  E-value=0.17  Score=42.37  Aligned_cols=89  Identities=11%  Similarity=0.068  Sum_probs=52.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~d~vi~~   79 (287)
                      +|| |-+|...++.+...|.+|+++++++.+...         ..+.... .+  .|..+. +....+..  ++|+||.+
T Consensus       186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~v--~~~~~~~~~~~~~~~--~~D~vid~  250 (360)
T 1piw_A          186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRED---------AMKMGAD-HY--IATLEEGDWGEKYFD--TFDLIVVC  250 (360)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHHTCS-EE--EEGGGTSCHHHHSCS--CEEEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHHcCCC-EE--EcCcCchHHHHHhhc--CCCEEEEC
Confidence            478 999999999888889999999988765211         1111111 12  234333 33333323  89999999


Q ss_pred             cCCC-ccchHHHHHhCCCCCcEEEEe
Q 023078           80 NGRE-ADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        80 a~~~-~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++.. .......++.++...+++.++
T Consensus       251 ~g~~~~~~~~~~~~~l~~~G~iv~~g  276 (360)
T 1piw_A          251 ASSLTDIDFNIMPKAMKVGGRIVSIS  276 (360)
T ss_dssp             CSCSTTCCTTTGGGGEEEEEEEEECC
T ss_pred             CCCCcHHHHHHHHHHhcCCCEEEEec
Confidence            8851 122333445555334666554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=91.15  E-value=0.4  Score=38.89  Aligned_cols=30  Identities=13%  Similarity=0.157  Sum_probs=27.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|..++..|.+.|++|++.+|++.+.
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            579999999999999999999999988763

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=91.11  E-value=0.38  Score=40.32  Aligned_cols=28  Identities=14%  Similarity=0.387  Sum_probs=20.8

Q ss_pred             CCcccchHHHHHH-HHHHCCC---eEEEEecC
Q 023078            1 MGGTRFIGVFLSR-LLVKEGH---QVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~-~L~~~g~---~V~~l~r~   28 (287)
                      .||||++|+.|++ .|.++.+   ++..++.+
T Consensus         6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~   37 (370)
T 3pzr_A            6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (370)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence            4999999999999 6666553   66666543

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=91.10  E-value=0.6  Score=38.05  Aligned_cols=79  Identities=18%  Similarity=0.146  Sum_probs=50.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+... .   .             .       ....++.++++  .+|+|+.+...
T Consensus       131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~---~-------------~-------~~~~~l~ell~--~aDvV~l~~P~  184 (303)
T 1qp8_A          131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G---P-------------W-------RFTNSLEEALR--EARAAVCALPL  184 (303)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S---S-------------S-------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCccc-c---C-------------c-------ccCCCHHHHHh--hCCEEEEeCcC
Confidence            57999999999999999999999987541 0   0             0       01123345666  78988876654


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..  .  ....+..++...-+|.+|+..
T Consensus       185 ~~~t~~~i~~~~l~~mk~gailin~srg~  213 (303)
T 1qp8_A          185 NKHTRGLVKYQHLALMAEDAVFVNVGRAE  213 (303)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             chHHHHHhCHHHHhhCCCCCEEEECCCCc
Confidence            321  1  124555566555677777643

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=91.07  E-value=0.21  Score=42.16  Aligned_cols=69  Identities=14%  Similarity=0.251  Sum_probs=44.6

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEEE
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi~   78 (287)
                      ||+|-+|...++.+...|.+|+++++++++... .        .+.... .++  |..+.   +.+.++....++|+||.
T Consensus       179 ag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~-~--------~~lGa~-~~~--~~~~~~~~~~v~~~t~~~g~d~v~d  246 (379)
T 3iup_A          179 AAASNLGQMLNQICLKDGIKLVNIVRKQEQADL-L--------KAQGAV-HVC--NAASPTFMQDLTEALVSTGATIAFD  246 (379)
T ss_dssp             STTSHHHHHHHHHHHHHTCCEEEEESSHHHHHH-H--------HHTTCS-CEE--ETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------HhCCCc-EEE--eCCChHHHHHHHHHhcCCCceEEEE
Confidence            389999999999888889999999987665211 1        111121 122  33332   34444444347999999


Q ss_pred             ccCC
Q 023078           79 INGR   82 (287)
Q Consensus        79 ~a~~   82 (287)
                      +.|.
T Consensus       247 ~~g~  250 (379)
T 3iup_A          247 ATGG  250 (379)
T ss_dssp             SCEE
T ss_pred             CCCc
Confidence            9875

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=91.03  E-value=0.13  Score=40.70  Aligned_cols=72  Identities=14%  Similarity=0.088  Sum_probs=45.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.++..|.+.|++|.+.+|++++... +        .+. .++..    ..+   +.++++  ++|+||-+.. 
T Consensus        10 G~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~-~--------~~~-~g~~~----~~~---~~~~~~--~~D~Vi~~v~-   69 (259)
T 2ahr_A           10 GVGKMASAIIKGLKQTPHELIISGSSLERSKE-I--------AEQ-LALPY----AMS---HQDLID--QVDLVILGIK-   69 (259)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHH-H--------HHH-HTCCB----CSS---HHHHHH--TCSEEEECSC-
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCHHHHHH-H--------HHH-cCCEe----eCC---HHHHHh--cCCEEEEEeC-
Confidence            47999999999999999999999998665221 1        000 01111    122   334455  7899987765 


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                       ......+++.++
T Consensus        70 -~~~~~~v~~~l~   81 (259)
T 2ahr_A           70 -PQLFETVLKPLH   81 (259)
T ss_dssp             -GGGHHHHHTTSC
T ss_pred             -cHhHHHHHHHhc
Confidence             334455665554

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=90.94  E-value=0.68  Score=38.27  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=50.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|++|++.+|+....                .++..    ..   ++.++++  ++|+|+-+...
T Consensus       171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~----~~---~l~ell~--~aDvVil~vP~  225 (333)
T 3ba1_A          171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY----YG---SVVELAS--NSDILVVACPL  225 (333)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE----ES---CHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee----cC---CHHHHHh--cCCEEEEecCC
Confidence            579999999999999999999999876541                12211    11   2445666  88999877654


Q ss_pred             Ccc--ch--HHHHHhCCCCCcEEEEeee
Q 023078           83 EAD--EV--EPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~--~~--~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +..  ..  ...+..++....+|.+|+.
T Consensus       226 ~~~t~~li~~~~l~~mk~gailIn~srG  253 (333)
T 3ba1_A          226 TPETTHIINREVIDALGPKGVLINIGRG  253 (333)
T ss_dssp             CGGGTTCBCHHHHHHHCTTCEEEECSCG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            321  11  3455556544456655543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=90.91  E-value=0.33  Score=39.46  Aligned_cols=29  Identities=14%  Similarity=0.059  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..++..|.+.|++|++.+|++.+
T Consensus        14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   42 (303)
T 3g0o_A           14 GLGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=90.90  E-value=0.51  Score=39.42  Aligned_cols=97  Identities=14%  Similarity=0.194  Sum_probs=55.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecC---CC-hHHHHhhh--ccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR---KD-YDFVKSSL--SAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~-~~~~~~~~--~~~~~d   74 (287)
                      +||+|-+|...++.+...|.+|++++++.++..+..     ....+.... .++..+-   .+ .+.+.++.  ...++|
T Consensus       174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----~~~~~lGa~-~vi~~~~~~~~~~~~~i~~~t~~~~~g~D  247 (364)
T 1gu7_A          174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGGEAK  247 (364)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHH-----HHHHhcCCe-EEEecCccchHHHHHHHHHHhhccCCCce
Confidence            589999999999888888999999987654300000     001111121 1221110   11 22344433  234799


Q ss_pred             EEEEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           75 VVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +||++.|...  ....++.++...+++.++.
T Consensus       248 vvid~~G~~~--~~~~~~~l~~~G~~v~~g~  276 (364)
T 1gu7_A          248 LALNCVGGKS--STGIARKLNNNGLMLTYGG  276 (364)
T ss_dssp             EEEESSCHHH--HHHHHHTSCTTCEEEECCC
T ss_pred             EEEECCCchh--HHHHHHHhccCCEEEEecC
Confidence            9999987432  2355677775567776653

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=90.87  E-value=0.091  Score=42.89  Aligned_cols=29  Identities=31%  Similarity=0.393  Sum_probs=26.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.++..|.+.|++|++++|++.+
T Consensus        10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~   38 (316)
T 2ew2_A           10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAH   38 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            46999999999999999999999998655

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=90.78  E-value=0.11  Score=42.86  Aligned_cols=68  Identities=16%  Similarity=0.299  Sum_probs=43.0

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhh---hh-cCCcEEEEecCCChHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFA---EF-SSKILHLKGDRKDYDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~d~~~~~~~~~~~~~~~~d   74 (287)
                      +| +|++|+.++..|+..|.  +|+++++++.+.....     .++.   .. ..++.+...|       .+.++  ++|
T Consensus        11 iG-aG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a-----~DL~~~~~~~~~~v~i~~~~-------~~a~~--~aD   75 (326)
T 3pqe_A           11 IG-AGFVGSSYAFALINQGITDELVVIDVNKEKAMGDV-----MDLNHGKAFAPQPVKTSYGT-------YEDCK--DAD   75 (326)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH-----HHHHHTGGGSSSCCEEEEEC-------GGGGT--TCS
T ss_pred             EC-CCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHH-----HHHHhccccccCCeEEEeCc-------HHHhC--CCC
Confidence            36 49999999999999886  8999999765422100     0010   00 1234443332       23566  899


Q ss_pred             EEEEccCCC
Q 023078           75 VVYDINGRE   83 (287)
Q Consensus        75 ~vi~~a~~~   83 (287)
                      +||.++|..
T Consensus        76 vVvi~ag~p   84 (326)
T 3pqe_A           76 IVCICAGAN   84 (326)
T ss_dssp             EEEECCSCC
T ss_pred             EEEEecccC
Confidence            999999864

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=90.75  E-value=0.54  Score=39.05  Aligned_cols=83  Identities=16%  Similarity=0.107  Sum_probs=52.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|+.......             .++.+.       +++.++++  ++|+|+.+...
T Consensus       180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~g~~~~-------~~l~ell~--~sDvV~l~~Pl  237 (345)
T 4g2n_A          180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------EGAIYH-------DTLDSLLG--ASDIFLIAAPG  237 (345)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------TTCEEC-------SSHHHHHH--TCSEEEECSCC
T ss_pred             EeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------cCCeEe-------CCHHHHHh--hCCEEEEecCC
Confidence            579999999999999999999999976431100             122211       24556666  78888876654


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..    -....+..++...-||.+|...
T Consensus       238 t~~T~~li~~~~l~~mk~gailIN~aRG~  266 (345)
T 4g2n_A          238 RPELKGFLDHDRIAKIPEGAVVINISRGD  266 (345)
T ss_dssp             CGGGTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence            322    1244566666555666666543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=90.73  E-value=0.73  Score=38.32  Aligned_cols=103  Identities=16%  Similarity=0.106  Sum_probs=60.4

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCcc---ccccCC-----------CCCchhhhhhcCCcE--EEEecCCChHHHH
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLP-----------GESDQEFAEFSSKIL--HLKGDRKDYDFVK   65 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~---~~~~~~-----------~~~~~~~~~~~~~~~--~~~~d~~~~~~~~   65 (287)
                      |.|-+|..+++.|...|. ++++++.+.-.   ...+.-           ......+.+..+.++  .+..++.+  ...
T Consensus        43 G~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~  120 (346)
T 1y8q_A           43 GLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIEK--KPE  120 (346)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCGGG--CCH
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecccCc--chH
Confidence            468899999999999995 78888654321   111110           001222333344544  44444432  234


Q ss_pred             hhhccCCccEEEEccCCCccchHHHHHhCC-CCCcEEEEeeeeEee
Q 023078           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (287)
Q Consensus        66 ~~~~~~~~d~vi~~a~~~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~  110 (287)
                      +.++  ++|+||.+.. +...-..+.++|+ ....||..++.+.+|
T Consensus       121 ~~~~--~~dvVv~~~d-~~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          121 SFFT--QFDAVCLTCC-SRDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             HHHT--TCSEEEEESC-CHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             HHhc--CCCEEEEcCC-CHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            5566  8999997643 3344444566676 567888887777666

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=90.72  E-value=0.084  Score=43.00  Aligned_cols=68  Identities=9%  Similarity=0.037  Sum_probs=44.0

Q ss_pred             CcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+ |.+|+.++..|.+.|. +|++..|+.++......        .......    +..+.+++.+.+.  ++|+||++.
T Consensus       148 Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~--------~~~~~~~----~~~~~~~~~~~~~--~aDivIn~t  212 (297)
T 2egg_A          148 GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVR--------EGDERRS----AYFSLAEAETRLA--EYDIIINTT  212 (297)
T ss_dssp             CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH--------HSCSSSC----CEECHHHHHHTGG--GCSEEEECS
T ss_pred             Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--------HhhhccC----ceeeHHHHHhhhc--cCCEEEECC
Confidence            55 7799999999999997 99999998765321110        0001000    1112345666676  899999998


Q ss_pred             CCCc
Q 023078           81 GREA   84 (287)
Q Consensus        81 ~~~~   84 (287)
                      +...
T Consensus       213 ~~~~  216 (297)
T 2egg_A          213 SVGM  216 (297)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            7643

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=90.64  E-value=1.3  Score=37.11  Aligned_cols=61  Identities=16%  Similarity=0.086  Sum_probs=45.4

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|.+|+.+++.|.+.|++|++++.++......+            . -..+..|..|.+.+.++++  ++|+|+..
T Consensus         9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~------------~-~~~~~~~~~d~~~l~~~~~--~~d~v~~~   69 (380)
T 3ax6_A            9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV------------A-DEQIVAGFFDSERIEDLVK--GSDVTTYD   69 (380)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG------------S-SEEEECCTTCHHHHHHHHH--TCSEEEES
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh------------C-ceEEECCCCCHHHHHHHHh--cCCEEEec
Confidence            478999999999999999999987654321111            1 1345678889898888886  89998854

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=90.54  E-value=0.22  Score=41.53  Aligned_cols=85  Identities=13%  Similarity=0.055  Sum_probs=52.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|++......         .  ..++..       .+++.++++  .+|+|+.+...
T Consensus       171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---------~--~~g~~~-------~~~l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE---------K--ETGAKF-------VEDLNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH---------H--HHCCEE-------CSCHHHHGG--GCSEEEECSCC
T ss_pred             EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH---------H--hCCCeE-------cCCHHHHHh--cCCEEEECCCC
Confidence            578999999999999999999999876431100         0  012221       124556676  78988876654


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..    -....+..++...-+|.+|...
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~  259 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGA  259 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCch
Confidence            321    1245566676555666666543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=90.51  E-value=0.12  Score=41.68  Aligned_cols=31  Identities=13%  Similarity=0.266  Sum_probs=27.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +|+||.+|+.++..|.+.|++|++++|++.+
T Consensus        17 IG~tG~mG~~la~~l~~~g~~V~~~~r~~~~   47 (286)
T 3c24_A           17 LGAGGKMGARITRKIHDSAHHLAAIEIAPEG   47 (286)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEECCSHHH
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            3677999999999999999999999998655

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=90.32  E-value=0.87  Score=38.20  Aligned_cols=90  Identities=10%  Similarity=0.078  Sum_probs=55.1

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-----hHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~~~d   74 (287)
                      +|+ |-+|...++.+...|. +|+++++++.+... .        .+  -+...+ .|..+     .+.+.++... ++|
T Consensus       202 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a--------~~--lGa~~v-i~~~~~~~~~~~~v~~~~~~-g~D  267 (376)
T 1e3i_A          202 FGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-A--------KA--LGATDC-LNPRELDKPVQDVITELTAG-GVD  267 (376)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-H--------HH--TTCSEE-ECGGGCSSCHHHHHHHHHTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-H--------HH--hCCcEE-EccccccchHHHHHHHHhCC-Ccc
Confidence            364 8999999998888898 89999887765211 1        11  122211 23322     1334443333 799


Q ss_pred             EEEEccCCCccchHHHHHhCCCC-CcEEEEee
Q 023078           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~~~-~~~i~~Ss  105 (287)
                      +||+++|.. ......++.++.. .+++.++.
T Consensus       268 vvid~~G~~-~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          268 YSLDCAGTA-QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             EEEESSCCH-HHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEEECCCCH-HHHHHHHHHhhcCCCEEEEECC
Confidence            999998742 2345567777755 68876653

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=90.29  E-value=0.98  Score=37.84  Aligned_cols=90  Identities=8%  Similarity=0.022  Sum_probs=54.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++. ++.+. +..        .+  -+... -.|..+.   +.+.++... ++|+||
T Consensus       171 ~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~-~~~--------~~--lGa~~-vi~~~~~~~~~~v~~~t~g-~~d~v~  236 (371)
T 3gqv_A          171 YGGSTATATVTMQMLRLSGYIPIATC-SPHNF-DLA--------KS--RGAEE-VFDYRAPNLAQTIRTYTKN-NLRYAL  236 (371)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HHH--------HH--TTCSE-EEETTSTTHHHHHHHHTTT-CCCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH-HHH--------HH--cCCcE-EEECCCchHHHHHHHHccC-CccEEE
Confidence            48899999999999988999999886 33331 111        11  12221 1233333   334444332 599999


Q ss_pred             EccCCCccchHHHHHhC-CCCCcEEEEee
Q 023078           78 DINGREADEVEPILDAL-PNLEQFIYCSS  105 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~-~~~~~~i~~Ss  105 (287)
                      .+.|.. ......++.+ +...+++.++.
T Consensus       237 d~~g~~-~~~~~~~~~l~~~~G~iv~~g~  264 (371)
T 3gqv_A          237 DCITNV-ESTTFCFAAIGRAGGHYVSLNP  264 (371)
T ss_dssp             ESSCSH-HHHHHHHHHSCTTCEEEEESSC
T ss_pred             ECCCch-HHHHHHHHHhhcCCCEEEEEec
Confidence            998842 2344566777 45567776653

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=90.28  E-value=0.66  Score=38.64  Aligned_cols=89  Identities=16%  Similarity=0.149  Sum_probs=54.1

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC--C-hH---HHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-YD---FVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~-~~---~~~~~~~~~~~   73 (287)
                      +|+ |-+|...++.+...|. +|+++++++.+.. ..        .+.... .+  .|..  + .+   .+.+... .++
T Consensus       178 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a--------~~lGa~-~v--i~~~~~~~~~~~~~i~~~~~-~g~  243 (356)
T 1pl8_A          178 CGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KA--------KEIGAD-LV--LQISKESPQEIARKVEGQLG-CKP  243 (356)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HH--------HHTTCS-EE--EECSSCCHHHHHHHHHHHHT-SCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HH--------HHhCCC-EE--EcCcccccchHHHHHHHHhC-CCC
Confidence            364 8899999988888898 8999998766521 11        111121 22  2333  2 22   2323222 379


Q ss_pred             cEEEEccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           74 DVVYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        74 d~vi~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |+||+++|.. ......++.++...+++.++
T Consensus       244 D~vid~~g~~-~~~~~~~~~l~~~G~iv~~G  273 (356)
T 1pl8_A          244 EVTIECTGAE-ASIQAGIYATRSGGTLVLVG  273 (356)
T ss_dssp             SEEEECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             CEEEECCCCh-HHHHHHHHHhcCCCEEEEEe
Confidence            9999998742 23455677787556777665

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=90.21  E-value=0.63  Score=39.32  Aligned_cols=89  Identities=16%  Similarity=0.086  Sum_probs=53.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC----------------------C
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D   60 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------------------~   60 (287)
                      |.|-+|...++.+...|.+|++.+|++.+... .        .+  -+..++..|..                      .
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~-~--------~~--~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQ-V--------ES--LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHH-H--------HH--TTCEECCC-----------------------CCH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH--cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            36999999999999999999999998755211 0        00  12222111110                      1


Q ss_pred             hHHHHhhhccCCccEEEEcc---CCCcc--chHHHHHhCCCCCcEEEEe
Q 023078           61 YDFVKSSLSAKGFDVVYDIN---GREAD--EVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        61 ~~~~~~~~~~~~~d~vi~~a---~~~~~--~~~~l~~a~~~~~~~i~~S  104 (287)
                      .+.+.+.+.  ++|+||+++   +....  -....++.++....+|.++
T Consensus       248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva  294 (384)
T 1l7d_A          248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA  294 (384)
T ss_dssp             HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred             HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence            233667777  899999988   42221  1355677777444566555

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=90.13  E-value=0.14  Score=42.82  Aligned_cols=28  Identities=18%  Similarity=0.358  Sum_probs=22.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (287)
                      .||||++|..|++.|.++. .++..+..+
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpk_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            5999999999999887764 477766543

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=90.13  E-value=0.14  Score=42.82  Aligned_cols=28  Identities=18%  Similarity=0.358  Sum_probs=22.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (287)
                      .||||++|..|++.|.++. .++..+..+
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpl_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            5999999999999887764 477766543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=90.06  E-value=0.65  Score=38.31  Aligned_cols=83  Identities=17%  Similarity=0.111  Sum_probs=51.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|++|++.+|+..+....         .  ..++..     .   ++.++++  ++|+|+-+...
T Consensus       162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~---------~--~~g~~~-----~---~l~e~l~--~aDvVi~~vp~  220 (330)
T 2gcg_A          162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA---------A--EFQAEF-----V---STPELAA--QSDFIVVACSL  220 (330)
T ss_dssp             CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH---------H--TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH---------H--hcCcee-----C---CHHHHHh--hCCEEEEeCCC
Confidence            469999999999999999999999876542110         0  112322     1   2344565  78999977654


Q ss_pred             Ccc--ch--HHHHHhCCCCCcEEEEeee
Q 023078           83 EAD--EV--EPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~--~~--~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ...  ..  ..++..++...-+|.+|+.
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence            321  11  3456667644456655543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=90.01  E-value=0.39  Score=41.93  Aligned_cols=82  Identities=11%  Similarity=0.063  Sum_probs=54.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.++++.+.....           ..++..     .+.   .++++  ++|+||.+.+.
T Consensus       281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-----------~~Ga~~-----~~l---~e~l~--~aDvVi~atgt  339 (494)
T 3ce6_A          281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAM-----------MEGFDV-----VTV---EEAIG--DADIVVTATGN  339 (494)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE-----CCH---HHHGG--GCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCEE-----ecH---HHHHh--CCCEEEECCCC
Confidence            3599999999999999999999999866521110           123332     122   33455  89999988765


Q ss_pred             CccchHHHHHhCCCCCcEEEEee
Q 023078           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ...-....++.++...+++.++.
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~  362 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGH  362 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSS
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCC
Confidence            43233457777875567776665

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=90.00  E-value=0.22  Score=41.29  Aligned_cols=90  Identities=16%  Similarity=0.166  Sum_probs=54.2

Q ss_pred             CCcccchHHHHHHHHHHC--CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi   77 (287)
                      +|| |-+|...++.+...  |.+|+++++++.+.. ..        .+.... .+  .|..+ .+.+.++....++|+||
T Consensus       177 ~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~-~~--------~~lGa~-~v--i~~~~~~~~~~~~~~g~g~D~vi  243 (344)
T 2h6e_A          177 NGI-GGLAVYTIQILKALMKNITIVGISRSKKHRD-FA--------LELGAD-YV--SEMKDAESLINKLTDGLGASIAI  243 (344)
T ss_dssp             ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHH-HH--------HHHTCS-EE--ECHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-HH--------HHhCCC-EE--eccccchHHHHHhhcCCCccEEE
Confidence            477 99999999988888  999999998766521 11        111111 11  23333 33333333333799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++++.. ......++.++...+++.++
T Consensus       244 d~~g~~-~~~~~~~~~l~~~G~iv~~g  269 (344)
T 2h6e_A          244 DLVGTE-ETTYNLGKLLAQEGAIILVG  269 (344)
T ss_dssp             ESSCCH-HHHHHHHHHEEEEEEEEECC
T ss_pred             ECCCCh-HHHHHHHHHhhcCCEEEEeC
Confidence            998742 23455666666444666554

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=89.91  E-value=0.13  Score=42.62  Aligned_cols=85  Identities=12%  Similarity=0.062  Sum_probs=46.4

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      .||+|++|+.+++.|.+++   .+++++....+. .+.+.          ..+..+...+. +++    .+.  ++|+||
T Consensus         9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~----------~~~~~i~~~~~-~~~----~~~--~vDvVf   70 (336)
T 2r00_A            9 FGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR----------FNGKTVRVQNV-EEF----DWS--QVHIAL   70 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee----------ecCceeEEecC-ChH----Hhc--CCCEEE
Confidence            3899999999999999873   467777632211 00010          01111111222 121    234  799999


Q ss_pred             EccCCCccchHHHHHhC-C-CCCcEEEEeee
Q 023078           78 DINGREADEVEPILDAL-P-NLEQFIYCSSA  106 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~-~-~~~~~i~~Ss~  106 (287)
                      .+.+...  .......+ + |. ++|-.|+.
T Consensus        71 ~a~g~~~--s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           71 FSAGGEL--SAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             ECSCHHH--HHHHHHHHHHTTC-EEEECSST
T ss_pred             ECCCchH--HHHHHHHHHHcCC-EEEEcCCc
Confidence            8877442  23333333 2 54 67777765

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=89.87  E-value=1.2  Score=37.38  Aligned_cols=65  Identities=11%  Similarity=-0.058  Sum_probs=48.1

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      +|.+|..+++.+.+.|++|++++..+.......             --+.+..+..|.+.+.++++..++|+|+....
T Consensus        19 ~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-------------~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e   83 (391)
T 1kjq_A           19 SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPEIE   83 (391)
T ss_dssp             CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEECCCCCchhhh-------------ccceEECCCCCHHHHHHHHHHcCCCEEEECCC
Confidence            478899999999999999999988654421111             11345678888888888887678999987544

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=89.87  E-value=0.4  Score=40.33  Aligned_cols=90  Identities=10%  Similarity=0.027  Sum_probs=57.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecC------------------CChHHH
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV   64 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------------------~~~~~~   64 (287)
                      |.|-+|...++.|...|.+|++++|++.+....         .+  .+.+++..+.                  .+.+.+
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---------~~--lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV---------RS--VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH---------HH--TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            458999999999999999999999987652211         11  1333332110                  123567


Q ss_pred             HhhhccCCccEEEEccCCCc-----cchHHHHHhCCCCCcEEEEee
Q 023078           65 KSSLSAKGFDVVYDINGREA-----DEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        65 ~~~~~~~~~d~vi~~a~~~~-----~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      .++++  ++|+||.++....     --+...++.++.-.-+|-++.
T Consensus       260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            77787  9999998753321     125678888874445555543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=89.87  E-value=0.74  Score=37.71  Aligned_cols=71  Identities=15%  Similarity=0.027  Sum_probs=45.7

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |++..+|+.+++.|+..|.+|++..|+.......-...        .... .......++++++.+.++  ++|+||...
T Consensus       184 G~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l--------a~~~~~~t~~~~t~~~~L~e~l~--~ADIVIsAt  253 (320)
T 1edz_A          184 NRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL--------KLNKHHVEDLGEYSEDLLKKCSL--DSDVVITGV  253 (320)
T ss_dssp             CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS--------SCCCCEEEEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             CCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH--------hhhcccccccccccHhHHHHHhc--cCCEEEECC
Confidence            66678899999999999999999988754422111100        0111 111111133477888888  899999887


Q ss_pred             CC
Q 023078           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      +.
T Consensus       254 g~  255 (320)
T 1edz_A          254 PS  255 (320)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=89.84  E-value=0.49  Score=39.15  Aligned_cols=80  Identities=14%  Similarity=0.019  Sum_probs=52.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|...|.+|++.+|+....   ..           ..+.     ..   ++.++++  ++|+|+.+...
T Consensus       152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~P~  207 (333)
T 1dxy_A          152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFD-----YV---SLEDLFK--QSDVIDLHVPG  207 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hccc-----cC---CHHHHHh--cCCEEEEcCCC
Confidence            569999999999999999999999976542   11           1111     11   3445666  78999977655


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +...    ....+..++....+|.+|+.
T Consensus       208 ~~~t~~li~~~~l~~mk~ga~lIn~srg  235 (333)
T 1dxy_A          208 IEQNTHIINEAAFNLMKPGAIVINTARP  235 (333)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred             chhHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            4321    13466677755567766654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=89.78  E-value=0.42  Score=39.50  Aligned_cols=87  Identities=9%  Similarity=0.019  Sum_probs=52.4

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEEE
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi~   78 (287)
                      |+ |-+|...++.+...|.+|+++++++++.. ..        .+  -+...+ .|..+.   +.+.+...  ++|+||.
T Consensus       174 Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~--------~~--lGa~~~-i~~~~~~~~~~~~~~~g--~~d~vid  238 (340)
T 3s2e_A          174 GI-GGLGHVAVQYARAMGLRVAAVDIDDAKLN-LA--------RR--LGAEVA-VNARDTDPAAWLQKEIG--GAHGVLV  238 (340)
T ss_dssp             CC-STTHHHHHHHHHHTTCEEEEEESCHHHHH-HH--------HH--TTCSEE-EETTTSCHHHHHHHHHS--SEEEEEE
T ss_pred             CC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HH--------HH--cCCCEE-EeCCCcCHHHHHHHhCC--CCCEEEE
Confidence            65 88999999998889999999999876522 11        11  122211 233332   33333222  7899999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +++. .......++.++...+++.++
T Consensus       239 ~~g~-~~~~~~~~~~l~~~G~iv~~G  263 (340)
T 3s2e_A          239 TAVS-PKAFSQAIGMVRRGGTIALNG  263 (340)
T ss_dssp             SSCC-HHHHHHHHHHEEEEEEEEECS
T ss_pred             eCCC-HHHHHHHHHHhccCCEEEEeC
Confidence            8763 233445666666445666554

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=89.69  E-value=0.62  Score=38.13  Aligned_cols=82  Identities=15%  Similarity=0.049  Sum_probs=53.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|++|++.+|+..+..  .        .  ..++..     .+   +.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~--------~--~~g~~~-----~~---l~ell~--~aDvVvl~~P~  206 (313)
T 2ekl_A          149 GFGRIGTKVGIIANAMGMKVLAYDILDIREK--A--------E--KINAKA-----VS---LEELLK--NSDVISLHVTV  206 (313)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--H--------H--HTTCEE-----CC---HHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCCcchhH--H--------H--hcCcee-----cC---HHHHHh--hCCEEEEeccC
Confidence            5799999999999999999999999875521  0        0  123332     12   345566  78999877654


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeee
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +..  .  ....+..++....+|.+|+.
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            321  1  13456667655566666654

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=89.67  E-value=0.45  Score=41.33  Aligned_cols=82  Identities=11%  Similarity=-0.091  Sum_probs=53.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++++++........           ..++.+        .++.++++  ..|+|+-+.+.
T Consensus       264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g~~~--------~~l~ell~--~aDiVi~~~~t  322 (479)
T 1v8b_A          264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNV--------VTLDEIVD--KGDFFITCTGN  322 (479)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence            5799999999999999999999999875421111           123322        13566777  89999977533


Q ss_pred             CccchHHHHHhCCCCCcEEEEee
Q 023078           83 EADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      ...-....++.++....+|.+++
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgr  345 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGH  345 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSS
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCC
Confidence            22223456666775556666665

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=89.66  E-value=0.19  Score=36.12  Aligned_cols=28  Identities=14%  Similarity=0.165  Sum_probs=23.5

Q ss_pred             Ccc---cchHHHHHHHHHHCCCeEEEEecCC
Q 023078            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGK   29 (287)
Q Consensus         2 Gat---G~iG~~l~~~L~~~g~~V~~l~r~~   29 (287)
                      |+|   |.+|..+++.|++.|++|+.+..+.
T Consensus        20 Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~   50 (145)
T 2duw_A           20 GASDKPDRPSYRVMKYLLDQGYHVIPVSPKV   50 (145)
T ss_dssp             SCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence            666   8899999999999999977766654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=89.66  E-value=0.25  Score=40.28  Aligned_cols=29  Identities=24%  Similarity=0.621  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|++|++.+|++.+
T Consensus        16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   44 (306)
T 3l6d_A           16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGK   44 (306)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=89.63  E-value=0.86  Score=38.15  Aligned_cols=90  Identities=14%  Similarity=0.151  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-----hHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~~~d   74 (287)
                      +|+ |-+|...++.+...|. +|+++++++.+.. ..        .+.... .++  |..+     .+.+.++... ++|
T Consensus       197 ~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~-~~--------~~lGa~-~vi--~~~~~~~~~~~~v~~~~~~-g~D  262 (373)
T 2fzw_A          197 FGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RA--------KEFGAT-ECI--NPQDFSKPIQEVLIEMTDG-GVD  262 (373)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HH--------HHHTCS-EEE--CGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HH--------HHcCCc-eEe--ccccccccHHHHHHHHhCC-CCC
Confidence            364 8999999998888898 8999988766521 11        111121 122  3322     2334443332 799


Q ss_pred             EEEEccCCCccchHHHHHhCCCC-CcEEEEee
Q 023078           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~~~-~~~i~~Ss  105 (287)
                      +||++++.. ......++.++.. .+++.++.
T Consensus       263 ~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  293 (373)
T 2fzw_A          263 YSFECIGNV-KVMRAALEACHKGWGVSVVVGV  293 (373)
T ss_dssp             EEEECSCCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCcH-HHHHHHHHhhccCCcEEEEEec
Confidence            999998742 2345567777755 78876653

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=89.59  E-value=0.1  Score=41.11  Aligned_cols=72  Identities=11%  Similarity=0.123  Sum_probs=43.8

Q ss_pred             cccchHHHHHHHHHHCCC----eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGH----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~----~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |.|.+|+.++..|.+.|+    +|++.+|++++......        .  .++..    ..+   ..++++  ++|+||-
T Consensus         9 G~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~--------~--~g~~~----~~~---~~e~~~--~aDvVil   69 (247)
T 3gt0_A            9 GCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASE--------K--YGLTT----TTD---NNEVAK--NADILIL   69 (247)
T ss_dssp             CCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHH--------H--HCCEE----CSC---HHHHHH--HCSEEEE
T ss_pred             CccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHH--------H--hCCEE----eCC---hHHHHH--hCCEEEE
Confidence            589999999999999998    99999998765321110        0  12221    122   233444  6899987


Q ss_pred             ccCCCccchHHHHHhCC
Q 023078           79 INGREADEVEPILDALP   95 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~   95 (287)
                      +.  .......+++.+.
T Consensus        70 av--~~~~~~~v~~~l~   84 (247)
T 3gt0_A           70 SI--KPDLYASIINEIK   84 (247)
T ss_dssp             CS--CTTTHHHHC---C
T ss_pred             Ee--CHHHHHHHHHHHH
Confidence            76  3444555555443

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=89.58  E-value=0.33  Score=34.72  Aligned_cols=27  Identities=15%  Similarity=0.219  Sum_probs=22.0

Q ss_pred             CCcc---cchHHHHHHHHHHCCCeEEEEec
Q 023078            1 MGGT---RFIGVFLSRLLVKEGHQVTLFTR   27 (287)
Q Consensus         1 tGat---G~iG~~l~~~L~~~g~~V~~l~r   27 (287)
                      +|+|   |.+|..+++.|.+.||+|+.+..
T Consensus        28 VGas~~~g~~G~~~~~~l~~~G~~v~~Vnp   57 (144)
T 2d59_A           28 VGASPKPERDANIVMKYLLEHGYDVYPVNP   57 (144)
T ss_dssp             ETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             EccCCCCCchHHHHHHHHHHCCCEEEEECC
Confidence            3777   89999999999999998665543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=89.56  E-value=0.43  Score=39.59  Aligned_cols=83  Identities=14%  Similarity=0.167  Sum_probs=52.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +|+ |-+|...++.+...|.+|+++++++.+...         ..+  -+...+.   .+.+.+    +. ++|+||++.
T Consensus       183 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~--lGa~~v~---~~~~~~----~~-~~D~vid~~  242 (348)
T 3two_A          183 AGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD---------ALS--MGVKHFY---TDPKQC----KE-ELDFIISTI  242 (348)
T ss_dssp             ESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH---------HHH--TTCSEEE---SSGGGC----CS-CEEEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH---------HHh--cCCCeec---CCHHHH----hc-CCCEEEECC
Confidence            365 899999999888889999999988766321         111  1222222   333332    22 899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEe
Q 023078           81 GREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +.. ......++.++...+++.++
T Consensus       243 g~~-~~~~~~~~~l~~~G~iv~~G  265 (348)
T 3two_A          243 PTH-YDLKDYLKLLTYNGDLALVG  265 (348)
T ss_dssp             CSC-CCHHHHHTTEEEEEEEEECC
T ss_pred             CcH-HHHHHHHHHHhcCCEEEEEC
Confidence            854 23455666666445666654

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=89.53  E-value=0.13  Score=44.73  Aligned_cols=30  Identities=17%  Similarity=0.289  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHC--CCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~--g~~V~~l~r~~~~~   32 (287)
                      |.|++|..++..|++.  |++|++++|++++.
T Consensus        12 G~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~   43 (467)
T 2q3e_A           12 GAGYVGGPTCSVIAHMCPEIRVTVVDVNESRI   43 (467)
T ss_dssp             CCSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            5799999999999998  89999999987663

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=89.52  E-value=0.091  Score=43.54  Aligned_cols=29  Identities=17%  Similarity=0.308  Sum_probs=24.1

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~   29 (287)
                      +||||++|+.|++.|.+. .+++..+.++.
T Consensus        10 vGatG~vG~~l~~~L~~~p~~el~~l~s~~   39 (337)
T 3dr3_A           10 VGASGYAGAELVTYVNRHPHMNITALTVSA   39 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence            499999999999999985 56888876554

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=89.51  E-value=0.26  Score=39.84  Aligned_cols=29  Identities=17%  Similarity=0.261  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.++..|.+.|++|++.+|++++
T Consensus         7 G~G~mG~~~a~~l~~~g~~V~~~~~~~~~   35 (296)
T 2gf2_A            7 GLGNMGNPMAKNLMKHGYPLIIYDVFPDA   35 (296)
T ss_dssp             CCSTTHHHHHHHHHHTTCCEEEECSSTHH
T ss_pred             eccHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            47999999999999999999999998765

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=89.46  E-value=0.92  Score=38.84  Aligned_cols=65  Identities=18%  Similarity=0.101  Sum_probs=48.2

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      +|.+|..+++.+.+.|++|++++..+.......             --+.+..|..|.+.+.++++..++|+|+....
T Consensus        27 ~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e   91 (433)
T 2dwc_A           27 SGELGKEIAIEAQRLGVEVVAVDRYANAPAMQV-------------AHRSYVGNMMDKDFLWSVVEREKPDAIIPEIE   91 (433)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCHHHHH-------------SSEEEESCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------cceEEECCCCCHHHHHHHHHHcCCCEEEECcc
Confidence            478999999999999999999987654311111             12345678888888888887668999987554

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=89.45  E-value=1.1  Score=37.58  Aligned_cols=90  Identities=9%  Similarity=0.055  Sum_probs=55.1

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-----hHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~~~d   74 (287)
                      +| +|-+|...++.+...|. +|+++++++.+... .        .+  -+...+ .|..+     .+.+.++... ++|
T Consensus       199 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~--------~~--lGa~~v-i~~~~~~~~~~~~~~~~~~~-g~D  264 (374)
T 1cdo_A          199 FG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK-A--------KV--FGATDF-VNPNDHSEPISQVLSKMTNG-GVD  264 (374)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-H--------HH--TTCCEE-ECGGGCSSCHHHHHHHHHTS-CBS
T ss_pred             EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-H--------HH--hCCceE-EeccccchhHHHHHHHHhCC-CCC
Confidence            36 48999999998888898 89999887765211 1        11  122211 23332     2233333332 799


Q ss_pred             EEEEccCCCccchHHHHHhCCCC-CcEEEEee
Q 023078           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~~~-~~~i~~Ss  105 (287)
                      +||++++.. ......++.++.. .+++.++.
T Consensus       265 ~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~  295 (374)
T 1cdo_A          265 FSLECVGNV-GVMRNALESCLKGWGVSVLVGW  295 (374)
T ss_dssp             EEEECSCCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCCH-HHHHHHHHHhhcCCcEEEEEcC
Confidence            999998742 2345567777755 78876653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=89.42  E-value=0.22  Score=41.56  Aligned_cols=88  Identities=15%  Similarity=0.175  Sum_probs=55.0

Q ss_pred             CCcccchHHHH-HHHH-HHCCCe-EEEEecCCc---cccccCCCCCchhhhhhcCCcEEEEecCCCh--HHHHhhhccCC
Q 023078            1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l-~~~L-~~~g~~-V~~l~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~   72 (287)
                      +|| |-+|... ++.+ ...|.+ |++++++++   +.. ..        .  .-+...+  |..+.  .++.++ .. +
T Consensus       179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~-~~--------~--~lGa~~v--~~~~~~~~~i~~~-~g-g  242 (357)
T 2b5w_A          179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID-II--------E--ELDATYV--DSRQTPVEDVPDV-YE-Q  242 (357)
T ss_dssp             ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH-HH--------H--HTTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred             ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH-HH--------H--HcCCccc--CCCccCHHHHHHh-CC-C
Confidence            477 9999999 8877 667887 999999876   421 11        1  1244444  55432  124444 43 7


Q ss_pred             ccEEEEccCCCccchHHHHHhCCCCCcEEEEee
Q 023078           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +|+||+++|.. ......++.++...+++.++.
T Consensus       243 ~Dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~  274 (357)
T 2b5w_A          243 MDFIYEATGFP-KHAIQSVQALAPNGVGALLGV  274 (357)
T ss_dssp             EEEEEECSCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred             CCEEEECCCCh-HHHHHHHHHHhcCCEEEEEeC
Confidence            99999998742 234456666664446776653

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=89.38  E-value=0.55  Score=38.46  Aligned_cols=86  Identities=15%  Similarity=0.154  Sum_probs=53.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.+...|.+|++++++.+.  +.        ..+.  +... ..|..+.+.+.+.++  ++|+||++.
T Consensus       159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~--~~--------~~~l--Ga~~-~i~~~~~~~~~~~~~--g~D~v~d~~  223 (321)
T 3tqh_A          159 HAGAGGVGHLAIQLAKQKGTTVITTASKRNH--AF--------LKAL--GAEQ-CINYHEEDFLLAIST--PVDAVIDLV  223 (321)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEECHHHH--HH--------HHHH--TCSE-EEETTTSCHHHHCCS--CEEEEEESS
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeccchH--HH--------HHHc--CCCE-EEeCCCcchhhhhcc--CCCEEEECC
Confidence            4899999999999999899999998754321  11        1111  2221 235555443555565  899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEE
Q 023078           81 GREADEVEPILDALPNLEQFIYC  103 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~  103 (287)
                      |..  .....++.++...+++.+
T Consensus       224 g~~--~~~~~~~~l~~~G~iv~~  244 (321)
T 3tqh_A          224 GGD--VGIQSIDCLKETGCIVSV  244 (321)
T ss_dssp             CHH--HHHHHGGGEEEEEEEEEC
T ss_pred             CcH--HHHHHHHhccCCCEEEEe
Confidence            843  224455555544466544

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=89.37  E-value=1.1  Score=37.43  Aligned_cols=89  Identities=15%  Similarity=0.166  Sum_probs=54.5

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-----hHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~~~d   74 (287)
                      +| +|-+|...++.+...|. +|+++++++.+... .        .+  -+...+ .|..+     .+.+.++... ++|
T Consensus       198 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~--------~~--lGa~~v-i~~~~~~~~~~~~~~~~~~~-g~D  263 (374)
T 2jhf_A          198 FG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAK-A--------KE--VGATEC-VNPQDYKKPIQEVLTEMSNG-GVD  263 (374)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-H--------HH--TTCSEE-ECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-H--------HH--hCCceE-ecccccchhHHHHHHHHhCC-CCc
Confidence            36 58999999998888898 89999987765211 1        11  122211 23322     1233333332 799


Q ss_pred             EEEEccCCCccchHHHHHhCCCC-CcEEEEe
Q 023078           75 VVYDINGREADEVEPILDALPNL-EQFIYCS  104 (287)
Q Consensus        75 ~vi~~a~~~~~~~~~l~~a~~~~-~~~i~~S  104 (287)
                      +||++++.. ......++.++.. .+++.++
T Consensus       264 ~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G  293 (374)
T 2jhf_A          264 FSFEVIGRL-DTMVTALSCCQEAYGVSVIVG  293 (374)
T ss_dssp             EEEECSCCH-HHHHHHHHHBCTTTCEEEECS
T ss_pred             EEEECCCCH-HHHHHHHHHhhcCCcEEEEec
Confidence            999998742 2345567777755 6887665

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=89.36  E-value=0.71  Score=38.69  Aligned_cols=65  Identities=20%  Similarity=0.357  Sum_probs=36.2

Q ss_pred             CCcccchHHHHHHHHHH-CCC---eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVK-EGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v   76 (287)
                      .||+|++|+.|++.|+. +++   .++.+..+. . ...++     .+    .+..+...+..+++.    ++  ++|+|
T Consensus         7 vGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~-G~~v~-----~~----~g~~i~~~~~~~~~~----~~--~~DvV   69 (367)
T 1t4b_A            7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-L-GQAAP-----SF----GGTTGTLQDAFDLEA----LK--ALDII   69 (367)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-T-TSBCC-----GG----GTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-C-CCCcc-----cc----CCCceEEEecCChHH----hc--CCCEE
Confidence            38999999999995554 443   556665542 1 11221     00    011222223434443    34  89999


Q ss_pred             EEccCC
Q 023078           77 YDINGR   82 (287)
Q Consensus        77 i~~a~~   82 (287)
                      |.+.+.
T Consensus        70 f~a~g~   75 (367)
T 1t4b_A           70 VTCQGG   75 (367)
T ss_dssp             EECSCH
T ss_pred             EECCCc
Confidence            998774

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=89.35  E-value=0.79  Score=37.38  Aligned_cols=83  Identities=17%  Similarity=0.075  Sum_probs=53.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|++.+|+..+.. .         .  ..++..     .+   +.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~---------~--~~g~~~-----~~---l~ell~--~aDvV~l~~p~  206 (307)
T 1wwk_A          149 GFGRIGYQVAKIANALGMNILLYDPYPNEER-A---------K--EVNGKF-----VD---LETLLK--ESDVVTIHVPL  206 (307)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-H---------H--HTTCEE-----CC---HHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCChhh-H---------h--hcCccc-----cC---HHHHHh--hCCEEEEecCC
Confidence            5799999999999999999999999865411 0         0  123322     12   445566  78999977654


Q ss_pred             Ccc--c--hHHHHHhCCCCCcEEEEeeee
Q 023078           83 EAD--E--VEPILDALPNLEQFIYCSSAG  107 (287)
Q Consensus        83 ~~~--~--~~~l~~a~~~~~~~i~~Ss~~  107 (287)
                      +..  .  ....+..++....+|.+|+..
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~  235 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGP  235 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCc
Confidence            321  1  134566677555677776643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	287
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-22
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-21
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-19
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-17
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	7e-15
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-13
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	9e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-12
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-11
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-11
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-10
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-09
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-09
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-08
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-08
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	5e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.003
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.003
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.004

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 91.0 bits (225), Expect = 8e-22
 Identities = 45/272 (16%), Positives = 87/272 (31%), Gaps = 24/272 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
           GG  FIG    R L+   +            +    G  ++    +   ++  + GD +D
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 61  YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
              +             +A+              E        +L       + + ++ S
Sbjct: 67  AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126

Query: 105 SAGVYLKSDLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL- 158
           +  VY   D     E+  ++P      S+    L   +   + G++    R    YGP  
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186

Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           +   +   F   L  G  +P+ G G  V +  H  D  R    VL   +A  ++++I G 
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245

Query: 219 KYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
             +T   L      + G     +     ++  
Sbjct: 246 LELTNRELTGILLDSLGADWSSVRKVADRKGH 277

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 91.0 bits (225), Expect = 1e-21
 Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 33/269 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L+  L+++G++V    R  +    +      Q+    + K     GD  D 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
             +   L     D VY++       V    P             +L+A     L    +F
Sbjct: 68  SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
              S++ +Y     +P  ET    P+S +   KL    +     ES G+   +       
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187

Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            P          +     +  +        G+   +   GH KD  +    +L  E+   
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245

Query: 211 QVFNISGEKYVTFDGLARACAKAAGFPEP 239
           + F I+     +        A   G    
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGIKLR 274

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 4e-19
 Identities = 50/269 (18%), Positives = 92/269 (34%), Gaps = 47/269 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  F+G  L+  L+ +GH+VT+         + +              I H   +  ++
Sbjct: 8   GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
           D V+        D +Y      +        PI     N                + +  
Sbjct: 57  DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113

Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
           S++ VY   ++ P  E      + + P++   +GK   E++     + +GV     R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +  
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231

Query: 211 QVFNISGEKYVTFDGLARACAKAAGFPEP 239
              N+   +  T    A+      G    
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVGSGSE 260

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 79.0 bits (194), Expect = 2e-17
 Identities = 50/304 (16%), Positives = 85/304 (27%), Gaps = 52/304 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           GG  FIG  + R ++K      V +     A   + L   S+     F         D  
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60

Query: 60  DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
           D   +         D V      +  +     P      N+                   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 99  ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
                 +F + S+  VY         E     P                 K +++ ++  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
              + G+          YGP ++   +          G+P+PI G G Q+    +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKA 256
           RA   V+   KA  + +NI G        +            P+   Y  +      +  
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPG 299

Query: 257 FPFR 260
              R
Sbjct: 300 HDRR 303

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 71.4 bits (173), Expect = 7e-15
 Identities = 35/270 (12%), Positives = 83/270 (30%), Gaps = 18/270 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F   +S    + G   D+
Sbjct: 10  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV    G    E +  +          +  + S  G  + +      
Sbjct: 68  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                + K++ +  +       ++G+ +T +      G   +                + 
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKAAGFP 237
           I G G         +D+    ++ + + +   +  +       ++ + L     K     
Sbjct: 178 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 237

Query: 238 EPELVHYNPKEFDFGKKKAFPFRDQVIASL 267
                 Y P+E         PF   +  ++
Sbjct: 238 LE--KAYVPEEEVLKLIADTPFPANISIAI 265

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 66.7 bits (161), Expect = 3e-13
 Identities = 24/279 (8%), Positives = 69/279 (24%), Gaps = 17/279 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R +         +              ++    D+
Sbjct: 10  GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 62  DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
             +  +L      +         +                  +    S  G+        
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
             E            K      +E+  + +T +      G      + +   H +     
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKAAG 235
           + I G G          D+    ++ + + +   + ++       ++   + +   + + 
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240

Query: 236 FPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVN 274
                   Y   +      K   + ++++          
Sbjct: 241 QNLD--KIYISSQDFLADMKDKSYEEKIVRCHLYQIFFR 277

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (159), Expect = 6e-13
 Identities = 39/252 (15%), Positives = 75/252 (29%), Gaps = 32/252 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G +L+  L+++G++V    R   +    ++        A     +    GD  D
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67

Query: 61  YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
              +   ++      +                    D++G     +   +    L N  +
Sbjct: 68  STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
           F   S++ +Y K   +P  ET    P+S +   KL    ++    E+  +   +      
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187

Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
             P          +                 G+       GH KD   A   +L N++  
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPE 247

Query: 210 RQVFNISGEKYV 221
             V        V
Sbjct: 248 DFVIATGEVHSV 259

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (154), Expect = 9e-13
 Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 22/217 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P  +     +        K      
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +   L     D+       E             +++ + C+SA +      +P     
Sbjct: 70  AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
               ++     +    VL   G+ + ++ P                  +   G    +  
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTL 167

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
            G   +++    DL    ++ L  ++        S +
Sbjct: 168 DGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 64.2 bits (155), Expect = 2e-12
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 27/261 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+K   +V           + L         +  S    ++GD ++ 
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 62  DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
           D    +            +        +PI     N++                F Y +S
Sbjct: 83  DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142

Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
           +  Y     LP  E     P S     ++  +L  +      G +   LR   ++G    
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202

Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFN 214
               Y  V   +   +  G  + I G G       ++++  +A +        A  QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262

Query: 215 ISGEKYVTFDGLARACAKAAG 235
           I+     + + L  A      
Sbjct: 263 IAVGGRTSLNQLFFALRDGLA 283

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 61.9 bits (149), Expect = 1e-11
 Identities = 41/277 (14%), Positives = 85/277 (30%), Gaps = 36/277 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L++LL+++G++V      ++                    I +  GD  D 
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61

Query: 62  DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
             V+ ++       V                     ++G     +   +       +F  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
            S++ ++         E     P+S +      G   T +  ES G++ +S        P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181

Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           L               R+K G+   +  G+       G   D   A   +L  +K     
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239

Query: 213 FNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF 249
           + ++     T   + +   +  G    + +  +P  F
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF 276

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.0 bits (149), Expect = 1e-11
 Identities = 33/241 (13%), Positives = 65/241 (26%), Gaps = 18/241 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +    +         G   +
Sbjct: 10  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
                  +               +   + I       +      +   Y+ S +  H   
Sbjct: 61  NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
                      K   E+ +   G+  T +            P   +    +  G      
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177

Query: 180 PGSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGF 236
           P    I +  L    D+  A +Q+  +  +K +     ++ E   +   +  A ++A   
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALNR 236

Query: 237 P 237
            
Sbjct: 237 R 237

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 57.2 bits (137), Expect = 4e-10
 Identities = 47/285 (16%), Positives = 85/285 (29%), Gaps = 72/285 (25%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + R L + G    +                              + +  D 
Sbjct: 9   GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43

Query: 62  DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
             V    +++  D VY            N   AD +   +    N+          + ++
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
             S+ +Y K    P  E++ +              K+    + ES     G ++ S+ P 
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
            +YGP  N++P        L              + + GSG  + +  HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223

Query: 203 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKAAGFPEP 239
           +                  N+      T   LA+  AK  G+   
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR 268

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 55.0 bits (131), Expect = 3e-09
 Identities = 50/294 (17%), Positives = 91/294 (30%), Gaps = 57/294 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG+ +IG      L++ GH V +       K  +   +     +           ++GD 
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59

Query: 59  KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
           ++   +   L     D V     +        +P+     N               ++ F
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
           I+ SSA VY     +P+ E+                  ++ T+        +   LR   
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 195
             G      + E           +  ++  GR   + I G+      G  V    HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 196 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK 247
           A   V  +          ++N+      +   +  A +KA G P     H+ P+
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPR 291

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.0 bits (131), Expect = 3e-09
 Identities = 44/280 (15%), Positives = 85/280 (30%), Gaps = 30/280 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FI   ++R L  EGH V      K     +     +    +       LK   +  
Sbjct: 22  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
           D V +  +  G       N         +          +  +++F Y SSA        
Sbjct: 81  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140

Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
           +   +  L   +    +P+      KL TE + +      G+     R   IYGP     
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200

Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                    +      +     + G G+Q      + +     +++   +   R+  NI 
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258

Query: 217 GEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKA 256
            ++ V+ + +A           P  +H+ P       + +
Sbjct: 259 SDEMVSMNEMAEMVLSFEEKKLP--IHHIPGPEGVRGRNS 296

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 54.2 bits (129), Expect = 4e-09
 Identities = 46/282 (16%), Positives = 77/282 (27%), Gaps = 38/282 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG      +      V +    K   A    G      A    ++  + GD  D 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64

Query: 62  DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
           + V    +     V Y   +  +    +P      N                     S+ 
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
            VY    L+ DL  H              +P S +   K  ++ ++     S GV  T  
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184

Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
                YGP  +           + AG    + G G  V    H  D +     +L   + 
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244

Query: 209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFD 250
                  +  +    + +     +  G P+    H   +   
Sbjct: 245 GETYLIGADGEKNNKE-VLELILEKMGQPKDAYDHVTDRAGH 285

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.8 bits (125), Expect = 1e-08
 Identities = 35/246 (14%), Positives = 63/246 (25%), Gaps = 33/246 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G T   G +L+  L+ +G++V    R  +    Q       +    +  ++ L   D  D
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 61  YDFVKSSLSAKGFDVVYDI----------------------NGREADEVEPILDALPNLE 98
              ++  +     D VY++                            E            
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
              Y + +     S   P  ET    P+S +          T +  E+ G+   +     
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187

Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
              P          +           +     G+       G   D   A   +L  EK 
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247

Query: 209 SRQVFN 214
              V  
Sbjct: 248 DDYVVA 253

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.8 bits (122), Expect = 2e-08
 Identities = 27/232 (11%), Positives = 56/232 (24%), Gaps = 24/232 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +   G  + + L +   +       ++   ++  G     F    +    +    +  
Sbjct: 10  GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDAL--------------PNLEQFIYCSSAG 107
           D +    SA           +         D                   +         
Sbjct: 70  DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVV 129

Query: 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
           V       P    + +   +    K   E  L   G  +T +R   +         E   
Sbjct: 130 VGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK------EGGV 183

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
              L       +      V       D+A   +Q L  E+A  + F++  + 
Sbjct: 184 RELLVGKDDELLQTDTKTV----PRADVAEVCIQALLFEEAKNKAFDLGSKP 231

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 50.9 bits (120), Expect = 5e-08
 Identities = 46/294 (15%), Positives = 87/294 (29%), Gaps = 65/294 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L+   + +G  +     L  +G       L    + EF         + GD
Sbjct: 7   GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
            ++ + V   ++    D  + + G+ A       P +D   N+                 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
             IY S+  VY   +   + ET+T           +  + L                   
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 188
                G+N    R   +YG   +   ++ +           +    +P  I G+G QV  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 189 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKAAGFPEP 239
           + H +D+   +   L N    R        +    ++   L +           
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR 291

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (116), Expect = 2e-07
 Identities = 47/294 (15%), Positives = 84/294 (28%), Gaps = 63/294 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  +IG      L++ G+   +    +        +L   +          I   + D 
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60

Query: 59  KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
            D   ++        D V                  Y  N      V   L    N+ +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
           ++ SSA VY  +    +++P  E   + P + +   K   E++L        K   +  L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 197
           R     G      + E                 +     + I G          ++D   
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

Query: 198 AFVQVLGNEKASR------------QVFNISGEKYVTFDGLARACAKAAGFPEP 239
                 G+  A +            + +N+   K  T   +  A  KA+G   P
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP 294

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (105), Expect = 3e-06
 Identities = 31/230 (13%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F     +    + 
Sbjct: 21  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
                                G E          L + E           L S       
Sbjct: 81  HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
           ++ +  + + +       V E K   ++  RP  +      +   EW   +         
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGS 186

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                       V  + RA +  +      +Q+  +  +       L +A
Sbjct: 187 LPDSWASGHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.8 bits (104), Expect = 3e-06
 Identities = 26/212 (12%), Positives = 52/212 (24%), Gaps = 20/212 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L   ++ E     +    +  +A+    ++                  +  
Sbjct: 9   GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGP------------LAELL 56

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +  S+      +   I    ++E    +D    L         G      +       
Sbjct: 57  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
                         +++ E      T  RP  ++GP     + E     +       I  
Sbjct: 117 KSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILP 171

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
                       DLARA  ++   E    +  
Sbjct: 172 GKYHGI---EACDLARALWRLALEEGKGVRFV 200

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (99), Expect = 3e-05
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 47/285 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
           GG  +IG      L++ G+    +     A        ES +   E + + +   + D  
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 60  DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
           D   ++       F  V     +        +P+     NL   I             L 
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 117 HCETDTVDPKSRH-----------------KGKLNTESVLES-----KGVNWTSLRPVYI 154
              + TV    ++                 K K   E ++       K  N   LR    
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188

Query: 155 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 196
            G      + E           +  ++  GR   +           G  V    HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248

Query: 197 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEP 239
           +  +       E+   +++N+      +   + +A  KA+G   P
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 26/282 (9%), Positives = 64/282 (22%), Gaps = 52/282 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   F+   +   L++ G++V    R  + +A        +    F + +     D    
Sbjct: 18  GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74

Query: 62  DFVKSSLSAKGFDV----VYDINGREADEVEPILDALPNLEQFIYC------------SS 105
                 +           V   + +  + V P +    N  +                + 
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134

Query: 106 AGVYLKSDLLPHCETDTVDPKSRH-------------------KGKLNTESVLESKGVNW 146
           + +  K ++      +                             K   E          
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194

Query: 147 TSLRPVY----------IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
                +           I+ P   +     +   L  G   P     +         D+ 
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPE 238
              +  L   +  R+    +   +  ++ +     K   +P 
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTF-DWNTVLATFRKL--YPS 292

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 37.5 bits (85), Expect = 0.001
 Identities = 25/237 (10%), Positives = 63/237 (26%), Gaps = 16/237 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + + L  +  +V         I               +      K +    
Sbjct: 8   GANGQLGREIQKQLKGKNVEVIPTDVQDLDIT---------NVLAVNKFFNEKKPNVVIN 58

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
               +++                        A     + +  S+  V+      P  E D
Sbjct: 59  CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118

Query: 122 T-VDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
                 +  K KL  E+ +++    +  +R  ++YG  N          +      +   
Sbjct: 119 EVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHD 178

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFP 237
             G   + +   +      V +   ++ +   F+ + +   ++   A    +  G  
Sbjct: 179 QVGTPTSTVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGID 229

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.4 bits (82), Expect = 0.003
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T F G +LS  L   G  V  ++     +          E A  +  +    GD +D 
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68

Query: 62 DFV 64
          + +
Sbjct: 69 NKL 71

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 36.1 bits (81), Expect = 0.003
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 23/79 (29%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T  +G  L R L   G+ + L    K                          GD  + 
Sbjct: 7  GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43

Query: 62 DFVKSSLSAKGFDVVYDIN 80
            V  ++     DV+ +  
Sbjct: 44 KGVAETVRKLRPDVIVNAA 62

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 45/322 (13%), Positives = 83/322 (25%), Gaps = 84/322 (26%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLF------------TRGKAPIAQQLPGESDQEFAEFS 48
           GG  +IG    R L+++  H V +                +  +A++L      +     
Sbjct: 9   GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWAD 68

Query: 49  SKILHLKGDRKDYDFVK----SSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
                  GD ++ DF+               +           +P+     N+   +   
Sbjct: 69  RYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLL 128

Query: 105 SAGVYLKSDLLPHCETDTVDP---------------------------KSRHKGKLNTES 137
            A +  K D +    +  +                             +S+   +     
Sbjct: 129 QAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD 188

Query: 138 VLESKGVNWTSLRPVYIYGPLNYNPVEEWF--------------------------FHRL 171
             E+ G+    LR     G      + E +                              
Sbjct: 189 CAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDA 248

Query: 172 KAGRPIPIPGS------GIQVTQLGHVKDLARAFVQVLGN--------EKASRQVFNISG 217
              + +PI G+      G  V    HV DLA A +  L          +     VFN+  
Sbjct: 249 STDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT 308

Query: 218 EKYVTFDGLARACAKAAGFPEP 239
            +  +   +     K  G P P
Sbjct: 309 SRGYSVREVIEVARKTTGHPIP 330

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	287
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.98
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.95
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.92
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.84
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.55
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.55
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.54
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.53
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.53
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.51
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.51
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.51
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.5
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.5
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.5
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.5
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.49
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.49
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.47
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.47
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.46
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.45
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.45
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.45
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.45
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.45
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.44
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.44
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.44
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.44
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.43
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.42
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.41
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.4
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.4
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.39
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.39
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.36
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.35
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.34
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.34
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.34
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.31
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.3
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.28
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.28
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.26
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.26
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.23
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.23
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.2
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.16
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.16
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.12
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.12
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.07
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.04
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.03
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.02
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.02
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.01
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.99
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	98.98
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.97
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.91
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.86
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.85
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.55
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.52
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.46
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.44
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.73
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.64
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.2
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.16
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.09
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.83
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.69
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.67
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.55
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.49
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.46
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.43
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.37
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.36
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.18
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.04
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.98
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.96
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.91
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.71
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.59
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.59
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.37
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.34
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.29
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.16
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.84
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.74
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	94.57
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	94.52
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.42
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	94.42
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.4
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	94.23
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	94.15
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.1
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.92
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	93.9
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.76
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.74
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	93.63
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.55
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	93.53
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.43
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.39
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.79
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	92.66
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	92.66
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.64
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.62
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	92.4
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.39
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	92.36
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	92.29
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.21
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.16
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	91.92
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	91.68
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.68
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.57
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.07
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.97
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	90.72
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	90.65
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.38
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	90.32
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	90.19
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	90.02
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	89.72
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.68
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	89.65
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.56
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.49
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.27
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.79
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	88.63
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	88.62
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.53
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	88.51
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.34
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	88.33
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	88.31
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	88.19
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	88.04
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.99
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.93
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.86
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	87.46
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	87.4
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.32
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	87.24
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.19
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	86.73
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	86.55
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	86.52
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	86.45
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	86.27
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	86.01
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	85.57
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	85.46
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.43
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	85.37
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.2
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	85.19
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	85.05
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	84.34
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	84.2
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.9
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.84
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	83.5
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	83.36
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.16
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	83.1
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	81.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	81.51
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	80.55
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	80.45
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	80.35

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.4e-41  Score=284.84  Aligned_cols=277  Identities=18%  Similarity=0.135  Sum_probs=201.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|..+...................+++++++|++|.+.+.++++..++|+|||+|
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~a   86 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLG   86 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEee
Confidence            79999999999999999999999999965431111100011111222468999999999999999999977889999999


Q ss_pred             CC----------------CccchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHH
Q 023078           81 GR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~  138 (287)
                      +.                |+.++.+++++|+     +++||||+||..+||.....+++|+++..|.+.| .+|+.+|.+
T Consensus        87 a~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~  166 (357)
T d1db3a_          87 AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWI  166 (357)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             cccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence            86                2346888999875     4457999999999998777789999999999988 999999988


Q ss_pred             HH----hcCCcEEEEccCceecCCCCCch----hHHHHHHHHcCCC-cccCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          139 LE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       139 ~~----~~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      ++    +++++++++||+++|||......    +...+.....+.. ...++++++.++++|++|+++++..++++.  .
T Consensus       167 ~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--~  244 (357)
T d1db3a_         167 TVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--Q  244 (357)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS--S
T ss_pred             HHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC--C
Confidence            74    46899999999999999643322    2334444455543 445588899999999999999999998875  4


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEc-----------CCCCcCC---C-------Ccccccccccc-ccch
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHY-----------NPKEFDF---G-------KKKAFPFRDQV-IASL  267 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~-----------~~~~~~~---~-------~~~~~~~~~~~-~~~~  267 (287)
                      ++.||+++++++|++|+++.+.+.+|... .+...           .......   +       .....|..... .+|+
T Consensus       245 ~~~yni~sg~~~s~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~  323 (357)
T d1db3a_         245 PEDFVIATGVQYSVRQFVEMAAAQLGIKL-RFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDP  323 (357)
T ss_dssp             CCCEEECCCCCEEHHHHHHHHHHTTTEEE-EEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCC
T ss_pred             CCeEEECCCCceehHHHHHHHHHHhCCcc-ccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCH
Confidence            57999999999999999999999999543 21111           0000000   0       00001112222 6799


Q ss_pred             hhHhhhhcccccc
Q 023078          268 KTAFSVNMVKRSM  280 (287)
Q Consensus       268 ~k~~~~lg~~p~~  280 (287)
                      +|++++|||+|.+
T Consensus       324 skakk~LGw~P~~  336 (357)
T d1db3a_         324 TKAHEKLGWKPEI  336 (357)
T ss_dssp             HHHHHHHCCCCCS
T ss_pred             HHHHHHHCCCcCC
Confidence            9999999999964

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=3.3e-40  Score=275.79  Aligned_cols=262  Identities=18%  Similarity=0.244  Sum_probs=214.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEE------EEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVT------LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~------~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d   74 (287)
                      ||||||||++|++.|+++|++|.      .+++........     .........+++++.+|..+.........  .+|
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d   78 (322)
T d1r6da_           6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-----NLAPVDADPRLRFVHGDIRDAGLLARELR--GVD   78 (322)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-----GGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-----HhhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence            79999999999999999988554      443322110000     00011124689999999999998888777  999


Q ss_pred             EEEEccCC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHH
Q 023078           75 VVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        75 ~vi~~a~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~  135 (287)
                      .|+|+|+.                |..++.+++++++  ++++|||+||..+||.....+++|+.+..|.+.| .+|..+
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~  158 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGS  158 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            99999976                3456788999987  8899999999999999888889999999999988 999999


Q ss_pred             HHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       136 E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                      |.+++    +++++++++||+++|||++. ..+++.+++++.+++++.+++++++.++|+|++|+|+++..+++++. .+
T Consensus       159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~~  237 (322)
T d1r6da_         159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AG  237 (322)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TT
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-CC
Confidence            99874    56899999999999999864 45788889999999999888999999999999999999999998866 56


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccc-cccchhhHhhhhcccccc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~lg~~p~~  280 (287)
                      ++||++++++++..|+++.+.+.+|.+.+.+...+....          ... ..+|++|+++.|||+|..
T Consensus       238 ~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~d~~k~~~~lg~~p~~  298 (322)
T d1r6da_         238 EIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKG----------HDLRYSLDGGKIERELGYRPQV  298 (322)
T ss_dssp             CEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTT----------CCCBCCBCCHHHHHHHCCCCCS
T ss_pred             CeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCC----------CCceeeeCHHHHHHHHCCCCCC
Confidence            899999999999999999999999988655554432211          111 168999999999999975

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-39  Score=267.64  Aligned_cols=255  Identities=19%  Similarity=0.241  Sum_probs=196.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|......+.+..      ......+++...|.     +..++.  ++|+|||+|
T Consensus         7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~-----~~~~~~--~~d~VihlA   73 (312)
T d2b69a1           7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH------WIGHENFELINHDV-----VEPLYI--EVDQIYHLA   73 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG------GTTCTTEEEEECCT-----TSCCCC--CCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH------hcCCCceEEEehHH-----HHHHHc--CCCEEEECc
Confidence            79999999999999999999999998754432222210      00023344444444     344555  899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCC-----CCCCCCccc-cchHHHHH
Q 023078           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~-----~~~~p~~~~-~~k~~~E~  137 (287)
                      +..                +.++.+++++++ ...++||+||..+||.....+.+|+     .+..|.+.| .+|.++|.
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence            862                335788999988 3348999999999997665555554     355677778 99999999


Q ss_pred             HHH----hcCCcEEEEccCceecCCCC---CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCC
Q 023078          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (287)
Q Consensus       138 ~~~----~~~~~~~ilr~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~  210 (287)
                      +++    +++++++++||+++|||++.   ..+++.++.++..++++.+++++.+.++|+|++|+++++..+++...  +
T Consensus       154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~--~  231 (312)
T d2b69a1         154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--S  231 (312)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--C
T ss_pred             HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc--C
Confidence            884    56999999999999999753   34677888899999999888999999999999999999999887653  5


Q ss_pred             ceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          211 QVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       211 ~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +.||++++..+++.++++.+.+.+|.+. .+...+....   .      .....+|++|++++|||+|..
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~------~~~~~~d~~k~~~~lgw~p~~  291 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQD---D------PQKRKPDIKKAKLMLGWEPVV  291 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCC-CEEEECCCTT---C------CCCCCBCCHHHHHHHCCCCCS
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCC-ceEECCCCCC---C------CCeeeECHHHHHHHHCCCCCC
Confidence            6899999999999999999999999875 4444332211   0      011267999999999999974

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.3e-38  Score=268.26  Aligned_cols=270  Identities=19%  Similarity=0.175  Sum_probs=202.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEE-EecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|++|++ +++..... ...+..      .....+++++++|++|.+.+.++++..++|+|||
T Consensus         6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD------ISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHh------hhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999997555 44322211 111110      0114689999999999999999998778999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC-----------CCCcEEEEeeeeEeecCCCCC----------CCCCC
Q 023078           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLP----------HCETD  121 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~-----------~~~~~i~~Ss~~~y~~~~~~~----------~~e~~  121 (287)
                      +|+..                ..++.+++++|+           ++++||++||..+||.....+          ..|..
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            99863                234677888764           246899999999999643221          23455


Q ss_pred             CCCCCccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      +..|.+.| .+|.++|.++.    +++++++++||+++|||++. ..+++.++.++..++++.+++++++.++|+|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            66788888 99999999884    46999999999999999754 45678888999999998888999999999999999


Q ss_pred             HHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhh
Q 023078          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVN  274 (287)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~l  274 (287)
                      |+++..++++.. .+++||++++.+++..|+++.+.+.++...+........   +......+..... .+|++|++++|
T Consensus       240 a~ai~~~~~~~~-~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~k~~~~l  315 (361)
T d1kewa_         240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQ---ITYVADRPGHDRRYAIDAGKISREL  315 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGG---EEEECCCTTCCCBCCBCCHHHHHHH
T ss_pred             HHHHHHHHhcCC-CCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccc---eeecCCCCCCCceeeeCHHHHHHHH
Confidence            999999998765 467999999999999999999998776433211110000   0000001111222 78999999999


Q ss_pred             cccccc
Q 023078          275 MVKRSM  280 (287)
Q Consensus       275 g~~p~~  280 (287)
                      ||+|..
T Consensus       316 gw~P~~  321 (361)
T d1kewa_         316 GWKPLE  321 (361)
T ss_dssp             CCCCSC
T ss_pred             CCCCCC
Confidence            999974

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.2e-38  Score=266.79  Aligned_cols=272  Identities=18%  Similarity=0.153  Sum_probs=212.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++||+|++++|........+.............+++++.+|..|...+.....  .++.|+|++
T Consensus        22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~   99 (341)
T d1sb8a_          22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA   99 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence            799999999999999999999999997443211100000000001123678999999999998888877  999999998


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-
Q 023078           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-  140 (287)
                      +.                |+.++.+++++|+  ++++|||+||..+||.....+.+|+.+..|.+.| .+|.++|.++. 
T Consensus       100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence            75                3457889999987  8889999999999998888889999999999998 99999999874 


Q ss_pred             ---hcCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc-CCCc
Q 023078          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQ  211 (287)
Q Consensus       141 ---~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~~~  211 (287)
                         +.+++++++||+++||++..     ..++..++..+..++++.+++++.+.++|+|++|++.++..++.... ..++
T Consensus       180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~  259 (341)
T d1sb8a_         180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ  259 (341)
T ss_dssp             HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence               45899999999999998642     34677788888999998888999999999999999999999887643 3678


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +||++++..+|++|+++.+.+.++.+...... ....     ....+..... .+|++|+++.|||+|..
T Consensus       260 ~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~d~~k~~~~LGw~p~~  323 (341)
T d1sb8a_         260 VYNIAVGGRTSLNQLFFALRDGLAENGVSYHR-EPVY-----RDFREGDVRHSLADISKAAKLLGYAPKY  323 (341)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHHTTCCCCC-CCEE-----ECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred             eeeecccccchHHHHHHHHHHHhccccccccc-cccc-----cCCCCCCcCeeeeCHHHHHHHHCCCcCC
Confidence            99999999999999999999999865411111 0000     0001111112 67999999999999965

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-36  Score=253.76  Aligned_cols=265  Identities=22%  Similarity=0.245  Sum_probs=200.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|........+.    ........+++++++|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            7999999999999999999999999874433111110    000111358999999999999999999988899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCC-CCCCCccc-cchHHHHHHHH
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~-~~~p~~~~-~~k~~~E~~~~  140 (287)
                      +..                +.++.+++++|+  ++++||++||..+|+.....+..|+. ...|.+.| .+|..+|.++.
T Consensus        82 a~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~  161 (338)
T d1udca_          82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT  161 (338)
T ss_dssp             SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred             CccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHH
Confidence            862                346888999997  89999999999999876655554444 45677777 99999999874


Q ss_pred             h-----cCCcEEEEccCceecCCCC-----------CchhHHHHHHHHcC-CCcccCC------CCCceeeeeeHHHHHH
Q 023078          141 S-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR  197 (287)
Q Consensus       141 ~-----~~~~~~ilr~~~v~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~Dva~  197 (287)
                      +     .+++++++|++++||+...           ..+++.++.....+ .++.+++      ++.+.++|+|++|++.
T Consensus       162 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~  241 (338)
T d1udca_         162 DLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLAD  241 (338)
T ss_dssp             HHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhh
Confidence            2     4789999999999998532           22445555555443 3444443      4678899999999999


Q ss_pred             HHHHHhcC--CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhh
Q 023078          198 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVN  274 (287)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~l  274 (287)
                      +...+...  ....+++||++++.++|+.|+++.+.+.+|.+. .+...+...          ....+ .+|++|++++|
T Consensus       242 ~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~-~~~~~~~~~----------~~~~~~~~d~~k~~~~l  310 (338)
T d1udca_         242 GHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV-NYHFAPRRE----------GDLPAYWADASKADREL  310 (338)
T ss_dssp             HHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCC-CEEEECCCT----------TCCSBCCBCCHHHHHHH
T ss_pred             hccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCC-ceEECCCCC----------CCCCEeeECHHHHHHHH
Confidence            88776653  333567999999999999999999999999776 444333211          11122 68999999999


Q ss_pred             cccccc
Q 023078          275 MVKRSM  280 (287)
Q Consensus       275 g~~p~~  280 (287)
                      ||+|..
T Consensus       311 gwkp~~  316 (338)
T d1udca_         311 NWRVTR  316 (338)
T ss_dssp             CCCCCC
T ss_pred             CCCcCC
Confidence            999965

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.2e-36  Score=251.40  Aligned_cols=266  Identities=18%  Similarity=0.157  Sum_probs=206.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++||+|++++|..+.....     ..+.....++++++.+|+.|.+.+.+.+....+++++|++
T Consensus         6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRW-----RLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCH-----HHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHH-----HHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            79999999999999999999999999976542100     0000111357899999999999999988877889999988


Q ss_pred             CC----------------CccchHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH
Q 023078           81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~  140 (287)
                      +.                |..++.+++++++  + .++|++.||..+||.....+.+|+.+..|.+.| .+|.++|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            75                2346788899987  4 557888888889988777778899999999998 99999999874


Q ss_pred             ----hcCCcEEEEccCceecCCCCCch----hHHHHHHHHcCC-CcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCc
Q 023078          141 ----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (287)
Q Consensus       141 ----~~~~~~~ilr~~~v~g~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~  211 (287)
                          +.+++++++||+++|||......    +..++.+...++ +...++++++.++|+|++|+|+++..+++++.  ++
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~  238 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD  238 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC
T ss_pred             HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--cC
Confidence                46899999999999999643322    233444444443 44456888999999999999999999998865  46


Q ss_pred             eEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          212 VFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       212 ~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      .||+++++..|+.++++.+.+.+|.+.+.....++...+       |..... ..|++|+++.|||+|.+
T Consensus       239 ~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r-------p~~~~~~~~d~~k~~k~lG~~P~~  301 (321)
T d1rpna_         239 DYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFR-------PAEVDVLLGNPAKAQRVLGWKPRT  301 (321)
T ss_dssp             CEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCC-------SSCCCBCCBCTHHHHHHHCCCCCS
T ss_pred             CceecccccceehhhhHHHHHHhCCCccceeecCCCCCC-------CCccCCccCCHHHHHHHHCCCcCC
Confidence            899999999999999999999999875444444332221       111222 67999999999999964

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.7e-36  Score=255.65  Aligned_cols=266  Identities=17%  Similarity=0.134  Sum_probs=206.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|.++.++.........    ..-.....+++++.+|+.|.+.+..+++  +.+.|+|+|
T Consensus         8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~----~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~a   81 (346)
T d1oc2a_           8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA----NLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHYA   81 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG----GTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH----HHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhhh
Confidence            7999999999999999999987776654321100000    0000113689999999999999999998  899999998


Q ss_pred             CC----------------CccchHHHHHhCC-CCCcEEEEeeeeEeecC------------CCCCCCCCCCCCCCccc-c
Q 023078           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~------------~~~~~~e~~~~~p~~~~-~  130 (287)
                      +.                |..++.++++++. ...++|++||..+||..            .....+|+.+..|.+.| .
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~  161 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS  161 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHH
Confidence            76                2346888888887 44689999999999842            12245566777888888 9


Q ss_pred             chHHHHHHHH----hcCCcEEEEccCceecCCCC-CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       131 ~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      +|.++|++++    +.+++++++||+++|||... ...+..++.....+.++.+++++++.++++|++|+|+++..++++
T Consensus       162 sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         162 TKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence            9999998874    56899999999999999753 455666777778888888889999999999999999999998887


Q ss_pred             CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccceee
Q 023078          206 EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSMLAF  283 (287)
Q Consensus       206 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~~~~  283 (287)
                      +. .++.||++++...++.++++.+.+.++.+...+...+...          ..... .+|++|++++|||+|....+
T Consensus       242 ~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~LGw~P~~t~l  309 (346)
T d1oc2a_         242 GR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRA----------GHDLRYAIDASKLRDELGWTPQFTDF  309 (346)
T ss_dssp             CC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCT----------TCCCBCCBCCHHHHHHHCCCCSCCCH
T ss_pred             cc-cCccccccccccccchHHHHHHHHHhCCCCcceEECCCCC----------CCCceeeeCHHHHHHHHCCCCcCCCH
Confidence            66 5679999999999999999999999998765554443221          11112 67999999999999986543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-36  Score=253.91  Aligned_cols=277  Identities=17%  Similarity=0.106  Sum_probs=205.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc-cCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++||+|++++|..+.... .+.............+++++.+|++|.+.+..++...++++++|+
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~   86 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL   86 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence            7999999999999999999999999997653111 110000001111135789999999999999999987889999999


Q ss_pred             cCC----------------CccchHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHH
Q 023078           80 NGR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        80 a~~----------------~~~~~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      ++.                |+.++.+++++++     +.++|||+||..+||.....+++|+.+..|.+.| .+|.++|+
T Consensus        87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~  166 (347)
T d1t2aa_          87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  166 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            875                3346788888865     4468999999999998777789999999999988 99999999


Q ss_pred             HHH----hcCCcEEEEccCceecCCCCCch-----hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcC
Q 023078          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (287)
Q Consensus       138 ~~~----~~~~~~~ilr~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  208 (287)
                      ++.    +.+++++++||+++|||......     ...+........+...++++++.++++|++|+++++..++++.. 
T Consensus       167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-  245 (347)
T d1t2aa_         167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  245 (347)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-
Confidence            874    46899999999999999643322     22234444556666677889999999999999999999998864 


Q ss_pred             CCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCc-----------CCCCcccccccccc-ccchhhHhhhhcc
Q 023078          209 SRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEF-----------DFGKKKAFPFRDQV-IASLKTAFSVNMV  276 (287)
Q Consensus       209 ~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~~k~~~~lg~  276 (287)
                       .+.|++......+..+..+.+...++... .........+           ........|..... .+|++|++++|||
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw  323 (347)
T d1t2aa_         246 -PEDFVIATGEVHSVREFVEKSFLHIGKTI-VWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNW  323 (347)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCE-EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCC
T ss_pred             -Cccceeccccccccchhhhhhhhhhccee-eecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCC
Confidence             35789988888999999999999999764 2211111110           00011112222223 6799999999999


Q ss_pred             cccc
Q 023078          277 KRSM  280 (287)
Q Consensus       277 ~p~~  280 (287)
                      +|.+
T Consensus       324 ~P~~  327 (347)
T d1t2aa_         324 KPRV  327 (347)
T ss_dssp             CCCS
T ss_pred             CcCC
Confidence            9974

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-35  Score=251.91  Aligned_cols=254  Identities=17%  Similarity=0.169  Sum_probs=198.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++||+|++++|.........           ....++..+|+.+.+.+..+++  ++|+|||++
T Consensus        21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a   87 (363)
T d2c5aa1          21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA   87 (363)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence            799999999999999999999999988655421111           2466888999999999999998  999999998


Q ss_pred             CCC-----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCC-------CCCCCCCCCccc-cchH
Q 023078           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPH-------CETDTVDPKSRH-KGKL  133 (287)
Q Consensus        81 ~~~-----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~-------~e~~~~~p~~~~-~~k~  133 (287)
                      +..                 ..++.+++++++  ++++||++||..+|+.....+.       .+..+..|.+.| .+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            663                 335778888876  8999999999999986544333       234456788888 9999


Q ss_pred             HHHHHHH----hcCCcEEEEccCceecCCCCC------chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilr~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      ++|++++    +.+++++++||+++||+.+..      ..............+...++++.+.++|+|++|+++++..++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9999874    468999999999999987421      122233444455566667788899999999999999999998


Q ss_pred             cCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccccccchhhHhhhhcccccc
Q 023078          204 GNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQVIASLKTAFSVNMVKRSM  280 (287)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  280 (287)
                      +..  .+++||++++..+|+.++++.+.+..|.+. .+...+....          .....+|++|++++|||+|..
T Consensus       248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~-~i~~~~~~~~----------~~~~~~d~ska~~~LGw~p~~  311 (363)
T d2c5aa1         248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL-PIHHIPGPEG----------VRGRNSDNNLIKEKLGWAPNM  311 (363)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC-CEEEECCCCC----------CSBCEECCHHHHHHHSCCCCC
T ss_pred             hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCCC-ceEeCCCCCC----------ccccccCHHHHHHHhCCCCCC
Confidence            764  457999999999999999999999999876 4444432210          111267999999999999964

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-35  Score=249.89  Aligned_cols=267  Identities=18%  Similarity=0.177  Sum_probs=199.7

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHh-hhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++| ++|+++++......+...          .++++++.+|+++.+.+.+ +++  ++|+|||
T Consensus         6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih   73 (342)
T d2blla1           6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (342)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence            7999999999999999998 589999987665443333          4789999999988766555 555  8999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCC-------CCCCCCccc-cchH
Q 023078           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-------DTVDPKSRH-KGKL  133 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~-------~~~~p~~~~-~~k~  133 (287)
                      +|+..                +.++.++++++. ...++++.||..+|+........+.       ....|.+.| .+|.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence            99873                446888999987 5567789999999997654433332       233455667 8999


Q ss_pred             HHHHHHH----hcCCcEEEEccCceecCCCC---------CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       134 ~~E~~~~----~~~~~~~ilr~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|+++.    +.+++++++|++.+||+...         ......++.++..++++.+++++++.++|+|++|+++++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            9999874    45899999999999998532         2245667888889999888899999999999999999999


Q ss_pred             HHhcCC--cCCCceEEeeCCC-cccHHHHHHHHHHHhCCCCCeEEEcCCCCcC-CCC-ccccc---ccccc-ccchhhHh
Q 023078          201 QVLGNE--KASRQVFNISGEK-YVTFDGLARACAKAAGFPEPELVHYNPKEFD-FGK-KKAFP---FRDQV-IASLKTAF  271 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~-~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~-~~~-~~~~~---~~~~~-~~~~~k~~  271 (287)
                      .+++++  ...+++||+++++ .+|++|+++.+.+.+|... .....+..... ... ....+   ....+ .+|++|++
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP-LRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH  312 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT-TGGGSCCCCCEEEC------------CCCCCBCCHHHH
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCc-cccccCcccccceeccccccccccccccccccCHHHHH
Confidence            999874  3357899998765 4899999999999998664 22222211110 000 00000   00112 67999999


Q ss_pred             hhhcccccc
Q 023078          272 SVNMVKRSM  280 (287)
Q Consensus       272 ~~lg~~p~~  280 (287)
                      ++|||+|..
T Consensus       313 ~~lgw~P~~  321 (342)
T d2blla1         313 RCLDWEPKI  321 (342)
T ss_dssp             HHHCCCCCC
T ss_pred             HHHCCCcCC
Confidence            999999974

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.8e-34  Score=239.85  Aligned_cols=270  Identities=16%  Similarity=0.102  Sum_probs=194.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccc-cCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++||+|++++|..+.... .+..............++++.+|+.+.+.+.+.++..++|+|||+
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~   86 (339)
T d1n7ha_           7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL   86 (339)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence            7999999999999999999999999996543111 111100001111135678999999999999999887789999999


Q ss_pred             cCCC----------------ccchHHHHHhCC-------CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHH
Q 023078           80 NGRE----------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (287)
Q Consensus        80 a~~~----------------~~~~~~l~~a~~-------~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~  135 (287)
                      |+..                ..++.+++++++       ...++++.||..+|+... .+.+|+.+..|.+.| .+|..+
T Consensus        87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~~sK~~~  165 (339)
T d1n7ha_          87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYAASKCAA  165 (339)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhhHHHHHH
Confidence            9873                223566666654       344677777777765543 468899999999988 999999


Q ss_pred             HHHH----HhcCCcEEEEccCceecCCCCCchhH----H-HHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPVEE----W-FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       136 E~~~----~~~~~~~~ilr~~~v~g~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      |.++    +.++++++++||+++|||........    . +...........+.+++.+.++++|++|+++++..+++++
T Consensus       166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            9886    45799999999999999975432222    2 2223333344455678899999999999999999999987


Q ss_pred             cCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          207 KASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       207 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      ..  ..+++..+...+..++++.+.+.+|..............       .+..... .+|++|++++|||+|..
T Consensus       246 ~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~d~~Kak~~LGw~P~~  311 (339)
T d1n7ha_         246 KP--DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF-------RPAEVDNLQGDASKAKEVLGWKPQV  311 (339)
T ss_dssp             SC--CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS-------CSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred             CC--CccccccccccccchhhhhhhhhhhcccCceeeeccCCC-------CCCCCCeeeECHHHHHHHHCCCcCC
Confidence            53  457777788899999999999999987533333322211       1111122 67999999999999963

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.6e-34  Score=239.74  Aligned_cols=265  Identities=18%  Similarity=0.179  Sum_probs=194.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|+++++..........    ........+++++.+|+.|.+.+.+++...++|+|||+|
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            7999999999999999999999999864332111000    001111468999999999999999999888999999999


Q ss_pred             CCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCC----CCCCCCCCCCCCCccc-cchHHHHH
Q 023078           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES  137 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~----~~~~~e~~~~~p~~~~-~~k~~~E~  137 (287)
                      +..                ..++.+++++|+  ++++||++||..+||...    ..+.+|+.+..|.+.| .+|.++|+
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~  162 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN  162 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence            863                345788899987  899999999999998543    3457788888898888 99999999


Q ss_pred             HHH------hcCCcEEEEccCceecCCCC-----------CchhHHHHHHHH-cCCCcccCCCC------CceeeeeeHH
Q 023078          138 VLE------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIPGSG------IQVTQLGHVK  193 (287)
Q Consensus       138 ~~~------~~~~~~~ilr~~~v~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~i~~~  193 (287)
                      ++.      ..+++++++|++++||+...           ..+++.+..... ...++.+++++      ...+|++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~  242 (347)
T d1z45a2         163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV  242 (347)
T ss_dssp             HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence            874      24789999999999997421           123444444443 33455555543      4567899999


Q ss_pred             HHHHHHHHHhcC------CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccc
Q 023078          194 DLARAFVQVLGN------EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IAS  266 (287)
Q Consensus       194 Dva~~~~~~~~~------~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  266 (287)
                      |.+.++..+++.      ....+++||+++++++|+.|+++.+.+.+|.+.+. ...+..          +....+ .+|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~-~~~~~~----------~~~~~~~~~d  311 (347)
T d1z45a2         243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY-KVTGRR----------AGDVLNLTAK  311 (347)
T ss_dssp             HHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--------------------CCCCCBC
T ss_pred             cccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCce-EeCCCC----------CCCCCEeeEC
Confidence            999988887753      22346799999999999999999999999987532 211110          111112 679


Q ss_pred             hhhHhhhhcccccc
Q 023078          267 LKTAFSVNMVKRSM  280 (287)
Q Consensus       267 ~~k~~~~lg~~p~~  280 (287)
                      ++|++++|||+|..
T Consensus       312 ~sk~~~~lGw~p~~  325 (347)
T d1z45a2         312 PDRAKRELKWQTEL  325 (347)
T ss_dssp             CHHHHHHTCCCCCC
T ss_pred             HHHHHHHHCCCCCC
Confidence            99999999999964

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-33  Score=233.25  Aligned_cols=269  Identities=17%  Similarity=0.140  Sum_probs=197.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC-chhh-hhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|+++|+++|++|++++|............. .... .....+++++++|++|.+.+.+++...++++++|
T Consensus         8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h   87 (346)
T d1ek6a_           8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence            7999999999999999999999999874333111111100 0011 1124688999999999999999998888999999


Q ss_pred             ccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCC-CCCCCCCccc-cchHHHHHH
Q 023078           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE-TDTVDPKSRH-KGKLNTESV  138 (287)
Q Consensus        79 ~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e-~~~~~p~~~~-~~k~~~E~~  138 (287)
                      +|+..                +.++.+++++++  ++++|+++||..+|+........+ .....|.++| .+|..+|+.
T Consensus        88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            99863                345788899887  899999999999998765433333 3344566667 999999987


Q ss_pred             HH-----hcCCcEEEEccCceecCCCC-----------CchhHHHHHHHHc-CCCcccC------CCCCceeeeeeHHHH
Q 023078          139 LE-----SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIP------GSGIQVTQLGHVKDL  195 (287)
Q Consensus       139 ~~-----~~~~~~~ilr~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~i~~~Dv  195 (287)
                      +.     ..+++++++|++.+||+...           ..+++.+...... +.++.++      .++.+.+||+|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~  247 (346)
T d1ek6a_         168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (346)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence            64     25899999999999998531           2234555544443 3444332      356778999999999


Q ss_pred             HHHHHHHhcC--CcCCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhh
Q 023078          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFS  272 (287)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~  272 (287)
                      |.++..++..  ....+++||++++..+++.|+++.+.+.+|.+. .+...+...          ..... .+|++|+++
T Consensus       248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~-~~~~~~~~~----------~e~~~~~~d~~k~~~  316 (346)
T d1ek6a_         248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI-PYKVVARRE----------GDVAACYANPSLAQE  316 (346)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC-CEEEECCCT----------TCCSEECBCCHHHHH
T ss_pred             cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCC-CeEECCCCC----------CCCCEeeECHHHHHH
Confidence            9998887543  233567999999999999999999999999876 334433221          11122 679999999


Q ss_pred             hhcccccc
Q 023078          273 VNMVKRSM  280 (287)
Q Consensus       273 ~lg~~p~~  280 (287)
                      +|||+|.+
T Consensus       317 ~lgw~p~~  324 (346)
T d1ek6a_         317 ELGWTAAL  324 (346)
T ss_dssp             TTCCCCCC
T ss_pred             HHCCCcCC
Confidence            99999975

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.8e-33  Score=239.81  Aligned_cols=271  Identities=15%  Similarity=0.145  Sum_probs=193.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc---c----cccCCCCCch----hh-hhhcCCcEEEEecCCChHHHHhhh
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---I----AQQLPGESDQ----EF-AEFSSKILHLKGDRKDYDFVKSSL   68 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~---~----~~~~~~~~~~----~~-~~~~~~~~~~~~d~~~~~~~~~~~   68 (287)
                      ||||||||++|++.|+++||+|++++.-...   .    ....+.....    .+ .....+++++.+|++|.+.+.+++
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~   86 (393)
T d1i24a_           7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   86 (393)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence            7999999999999999999999999721100   0    0000100000    01 111368999999999999999999


Q ss_pred             ccCCccEEEEccCC-------------------CccchHHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCC--------
Q 023078           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHC--------  118 (287)
Q Consensus        69 ~~~~~d~vi~~a~~-------------------~~~~~~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~--------  118 (287)
                      +..++|+|||+|+.                   |+.++.+++++++  +. +++++.||..+|+.... +..        
T Consensus        87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~  165 (393)
T d1i24a_          87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITH  165 (393)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEE
T ss_pred             HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccccccccc
Confidence            87789999999985                   2346788899887  44 46777787777765432 111        


Q ss_pred             ------CCCCCCCCccc-cchHHHHHHH----HhcCCcEEEEccCceecCCCC------------------CchhHHHHH
Q 023078          119 ------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (287)
Q Consensus       119 ------e~~~~~p~~~~-~~k~~~E~~~----~~~~~~~~ilr~~~v~g~~~~------------------~~~~~~~~~  169 (287)
                            +..+..|.+.| .+|..+|.++    ++.+++++++||+++|||+..                  ..++..++.
T Consensus       166 ~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  245 (393)
T d1i24a_         166 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  245 (393)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             cccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhH
Confidence                  11245677778 9999999887    467999999999999998642                  124567788


Q ss_pred             HHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEe-eCCCcccHHHHHHHHHHHhC---CCCCeEEEcC
Q 023078          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKAAG---FPEPELVHYN  245 (287)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~i~~~i~~~~g---~~~~~~~~~~  245 (287)
                      +...++++.+++++.+.+||+|++|+++++..++++....+..+.+ .+++.+|++++++.+.+..+   ... .....+
T Consensus       246 ~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~-~~~~~~  324 (393)
T d1i24a_         246 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV-KKMTVP  324 (393)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC-CEEEEC
T ss_pred             HhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc-ceeecc
Confidence            8889999999999999999999999999999999887655543222 34567999999999988764   333 233222


Q ss_pred             CCCcCCCCcccccccccc-ccchhhHhhhhccccccee
Q 023078          246 PKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSMLA  282 (287)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~~~  282 (287)
                      ....        +..... ..|++|+++ |||+|...-
T Consensus       325 ~~~~--------~~~~~~~~~d~~k~~~-LGw~P~~~~  353 (393)
T d1i24a_         325 NPRV--------EAEEHYYNAKHTKLME-LGLEPHYLS  353 (393)
T ss_dssp             CSSC--------SCSSCCCCBCCCHHHH-TTCCCCCCC
T ss_pred             CCCC--------CCCccEecCCHHHHHH-cCCccccCH
Confidence            2211        111112 678899975 999998743

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.4e-32  Score=234.54  Aligned_cols=269  Identities=20%  Similarity=0.229  Sum_probs=193.9

Q ss_pred             CCcccchHHHHHHHHHH-CCCeEEEEecCCccccccCCCCCchh------------hhhhcCCcEEEEecCCChHHHHhh
Q 023078            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQE------------FAEFSSKILHLKGDRKDYDFVKSS   67 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~d~~~~~~~~~~   67 (287)
                      ||||||||++|+++|++ .||+|+++++-...............            ......++.++.+|++|.+.+.++
T Consensus         8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (383)
T d1gy8a_           8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (383)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence            79999999999999997 58999999852211000000000000            001134688999999999999999


Q ss_pred             hccC-CccEEEEccCCC----------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCC-------CCCCCCCC
Q 023078           68 LSAK-GFDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (287)
Q Consensus        68 ~~~~-~~d~vi~~a~~~----------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~-------~~~~~e~~  121 (287)
                      ++.. ++|+|||+|+..                ..++.+++++++  ++++++++|+..+|+...       ..+..|+.
T Consensus        88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~  167 (383)
T d1gy8a_          88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (383)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence            8754 569999999863                345778888877  889999999999988543       23566777


Q ss_pred             CCCCCccc-cchHHHHHHHH----hcCCcEEEEccCceecCCCCC----------chhHHHHHHHH--------------
Q 023078          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK--------------  172 (287)
Q Consensus       122 ~~~p~~~~-~~k~~~E~~~~----~~~~~~~ilr~~~v~g~~~~~----------~~~~~~~~~~~--------------  172 (287)
                      +..|.+.| .+|...|++++    .++++++++|++++|||.+..          .+++.++.++.              
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~  247 (383)
T d1gy8a_         168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (383)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence            78888888 99999999884    468999999999999997532          12333333222              


Q ss_pred             --cCCCcccC------CCCCceeeeeeHHHHHHHHHHHhcCC--------cCCCceEEeeCCCcccHHHHHHHHHHHhCC
Q 023078          173 --AGRPIPIP------GSGIQVTQLGHVKDLARAFVQVLGNE--------KASRQVFNISGEKYVTFDGLARACAKAAGF  236 (287)
Q Consensus       173 --~~~~~~~~------~~~~~~~~~i~~~Dva~~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~  236 (287)
                        .+.++.++      +++.+.+||+|++|+++++..+++..        ...+++||++++.++|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence              22233332      34678899999999999999988631        224579999999999999999999999998


Q ss_pred             CCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          237 PEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +. .+...+...          ..... ..|++|++++|||+|..
T Consensus       328 ~~-~~~~~~~~~----------~d~~~~~~d~~k~~k~LGw~P~~  361 (383)
T d1gy8a_         328 PI-PVRECGRRE----------GDPAYLVAASDKAREVLGWKPKY  361 (383)
T ss_dssp             CC-CEEEECCCT----------TCCSEECBCCHHHHHHTCCCCSC
T ss_pred             CC-ceEECCCCC----------CCcCEeeeCHHHHHHHHCCccCC
Confidence            86 333332211          11122 67999999999999974

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=1.2e-32  Score=225.17  Aligned_cols=242  Identities=17%  Similarity=0.138  Sum_probs=198.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|.++||+|++++|++                          +|+.|.+.+.++++..++|+|||++
T Consensus         7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            79999999999999999999999998852                          3778999999999877899999999


Q ss_pred             CCCcc----------------chHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~~~----------------~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +....                ....+.+.+. ...++++.||..+|+.....+..|.++..|...| ..|...|.++++.
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            87432                2233344444 5678889999999998888888899888888887 9999999999999


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeCCCccc
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~~~~~s  222 (287)
                      +.+++++||+++||++  ..+...++..+..+..+.+.+  ++.++++|++|+++++..++++..  .++||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDG--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSS--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEE
T ss_pred             CCCccccceeEEeCCC--cccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccc
Confidence            9999999999999996  346667788888887776654  578999999999999999998764  3599999999999


Q ss_pred             HHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          223 FDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       223 ~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      +.|+++.+.+.+|.+. .+.+++...+.....     ++.. .+|++|+++.|||+|..
T Consensus       215 ~~e~~~~i~~~~g~~~-~i~~i~~~~~~~~a~-----rp~~~~ld~~k~~~~~g~~~~~  267 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDV-KVTPCTTEEFPRPAK-----RPKYSVLRNYMLELTTGDITRE  267 (281)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEEECSTTSCCSSC-----CCSBCCBCCHHHHHTTCCCCCB
T ss_pred             hHHHHHHHHHHhCCCc-eEEeccHHHcCCcCC-----CccccccCHHHHHHHhCCCCCC
Confidence            9999999999999886 677666554321111     1122 68999999999999864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-32  Score=225.59  Aligned_cols=243  Identities=18%  Similarity=0.233  Sum_probs=187.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|+.|+++++..                         +.|+.+.+.+.++++..++|.|+|++
T Consensus         8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           8 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence            79999999999999999999988765432                         23778889998888877899999998


Q ss_pred             CC-----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCC-----CCCccc-cchHHH
Q 023078           81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPKSRH-KGKLNT  135 (287)
Q Consensus        81 ~~-----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~-----~p~~~~-~~k~~~  135 (287)
                      +.                 |+.++.+++++|+  +++||||+||.++||.....+.+|+.+.     .|.+.| .+|.++
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            65                 2346788999986  8899999999999998777677765433     233457 999999


Q ss_pred             HHHHH----hcCCcEEEEccCceecCCCCC-----chh-----HHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          136 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       136 E~~~~----~~~~~~~ilr~~~v~g~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                      |+++.    +.+++++++||+++|||.+..     .+.     .........+..+...+++.+.++++|++|++.++..
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99874    568999999999999997431     111     1233445556777777888999999999999999999


Q ss_pred             HhcCCc--------CCCceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCccccccccc-cccchhhHhh
Q 023078          202 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQ-VIASLKTAFS  272 (287)
Q Consensus       202 ~~~~~~--------~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~  272 (287)
                      ++++..        .....++++.+.+.+..++++.+.+.+|.+. .+...+...          .... ..+|++|++ 
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~-~i~~~~~~~----------~~~~~~~~d~sk~k-  290 (315)
T d1e6ua_         223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG-RVVFDASKP----------DGTPRKLLDVTRLH-  290 (315)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS-EEEEETTSC----------CCCSBCCBCCHHHH-
T ss_pred             hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCc-ceEECCCCC----------CCCceeccCHHHHH-
Confidence            886532        2456899999999999999999999999886 555433211          1111 167999996 


Q ss_pred             hhcccccc
Q 023078          273 VNMVKRSM  280 (287)
Q Consensus       273 ~lg~~p~~  280 (287)
                      +|||+|..
T Consensus       291 ~Lg~~p~~  298 (315)
T d1e6ua_         291 QLGWYHEI  298 (315)
T ss_dssp             HTTCCCCC
T ss_pred             HcCCCCCC
Confidence            59999974

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.98  E-value=1.5e-31  Score=224.18  Aligned_cols=264  Identities=19%  Similarity=0.254  Sum_probs=192.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|+++++-.......     .........+++++.+|+.+.+.+.++++..++|+|||+|
T Consensus         6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~-----~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD-----NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh-----HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            79999999999999999999999997532221100     0011122468999999999999999999876789999999


Q ss_pred             CC----------------CccchHHHHHhCC--CCCcEEEEeeeeEeecCC-CC----------------CCCCCCCCCC
Q 023078           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LL----------------PHCETDTVDP  125 (287)
Q Consensus        81 ~~----------------~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~-~~----------------~~~e~~~~~p  125 (287)
                      +.                |+.++.++++++.  +++++++.||..+++... ..                ...+..+..|
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            86                3456889999987  777777777766554322 11                1223344456


Q ss_pred             Cccc-cchHHHHHHH----HhcCCcEEEEccCceecCCCC----CchhHHHHHHHH-----cCCCcccCCCCCceeeeee
Q 023078          126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~----~~~~~~~~ilr~~~v~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~  191 (287)
                      .+.| ..|...|.+.    +.++...+++|++.+|++...    ...+..++..+.     .++++.+++++.+.++|+|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            6666 8888888775    457899999999999987532    223344444433     3567888899999999999


Q ss_pred             HHHHHHHHHHHhcCCc-CCCceEEeeC--CCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccch
Q 023078          192 VKDLARAFVQVLGNEK-ASRQVFNISG--EKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASL  267 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~-~~~~~~~~~~--~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  267 (287)
                      ++|++++++.++++.. ..+++|++..  +..+++.|+++.+.+..|.+. .+...+...          ..... ..|+
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~----------~~~~~~~~d~  309 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM-RFTNLPVRE----------SDQRVFVADI  309 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC-CEEEECCCS----------SCCSEECBCC
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCc-eeEeCCCCC----------CCcCeeeECH
Confidence            9999999999997743 3678999854  455899999999999999875 445443221          11112 6799


Q ss_pred             hhHhhhhcccccc
Q 023078          268 KTAFSVNMVKRSM  280 (287)
Q Consensus       268 ~k~~~~lg~~p~~  280 (287)
                      +|++++|||+|..
T Consensus       310 ~k~~~~Lg~~p~~  322 (338)
T d1orra_         310 KKITNAIDWSPKV  322 (338)
T ss_dssp             HHHHHHHCCCCCS
T ss_pred             HHHHHHHCCCcCC
Confidence            9999999999964

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.97  E-value=4.9e-30  Score=216.60  Aligned_cols=263  Identities=14%  Similarity=0.127  Sum_probs=191.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+..+....+      .......+++++.+|++|.+.+.++++...+|+|+|++
T Consensus        14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~------~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_          14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHH------hhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            799999999999999999999999999876633211      11111358999999999999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC--C-CCcEEEEeeeeEeec-CCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~--~-~~~~i~~Ss~~~y~~-~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      +..                ..++.+++++++  + ...+++.|+..++.. ....+.+++.+..|.+.| .+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            863                345788888876  4 445555555544443 334456667777788877 8888888665


Q ss_pred             H-------------hcCCcEEEEccCceecCCCC--CchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       140 ~-------------~~~~~~~ilr~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      .             ..++.++++||+++|||++.  ..+++.+++....+.++ .++.+.+.++++|++|++.++..+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccchhhhhhh
Confidence            2             35789999999999999853  45666777777766654 45778899999999999999998887


Q ss_pred             CCcC----CCceEE--eeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhccc
Q 023078          205 NEKA----SRQVFN--ISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVK  277 (287)
Q Consensus       205 ~~~~----~~~~~~--~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~  277 (287)
                      +...    .+...+  ...+..++..++++.+.+.++.+. .+......         .|..... .+|++|++++|||+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~---------~~~~~~~~~~d~skak~~LGw~  316 (356)
T d1rkxa_         247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA-SWQLDGNA---------HPHEAHYLKLDCSKAKMQLGWH  316 (356)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC-CEEC----------------CCCCCCBCCHHHHHHHCCC
T ss_pred             hhcccccccccccccccccccccccchhhhhhHHHhCCCc-cEEEcCCC---------CCCCcCeeeEcHHHHHHHHCCC
Confidence            5322    122333  334456899999999999999765 33322111         1111122 67999999999999


Q ss_pred             ccc
Q 023078          278 RSM  280 (287)
Q Consensus       278 p~~  280 (287)
                      |.+
T Consensus       317 P~~  319 (356)
T d1rkxa_         317 PRW  319 (356)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            975

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=6.5e-30  Score=214.66  Aligned_cols=230  Identities=13%  Similarity=0.057  Sum_probs=167.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|+++|++|++++|+.++.....+   .............+.+|+.+.+.+.+++.  ++|+|+|++
T Consensus        17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a   91 (342)
T d1y1pa1          17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK---RWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA   91 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHH---hhhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence            7999999999999999999999999998654221110   00001111234557799999999999998  999999998


Q ss_pred             CC-------------CccchHHHHHhCC---CCCcEEEEeeeeEeec-CC---CCC----------------CCCCCCCC
Q 023078           81 GR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLK-SD---LLP----------------HCETDTVD  124 (287)
Q Consensus        81 ~~-------------~~~~~~~l~~a~~---~~~~~i~~Ss~~~y~~-~~---~~~----------------~~e~~~~~  124 (287)
                      +.             |+.++.+++++|+   ++++|||+||..+++. ..   ...                ..|+.+..
T Consensus        92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            87             3346888998874   6899999999764332 11   111                12333445


Q ss_pred             CCccc-cchHHHHHHH----Hhc--CCcEEEEccCceecCCC----CCchhHHHHHHHHcCCCcccCCCCCceeeeeeHH
Q 023078          125 PKSRH-KGKLNTESVL----ESK--GVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~----~~~--~~~~~ilr~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (287)
                      |.+.| .+|..+|+++    +++  ++.++++||+++|||..    .......++..+..++..... .+.+.++|+|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHH
Confidence            55667 9999999865    333  57789999999999852    233455677777777654332 345668999999


Q ss_pred             HHHHHHHHHhcCCcCCCceEEeeCCCcccHHHHHHHHHHHhCCC
Q 023078          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       194 Dva~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~g~~  237 (287)
                      |+|++++.+++++...+ .|+++++..+|++|+++.+.+.++..
T Consensus       251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p~~  293 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcCCC
Confidence            99999999998876555 56688888999999999999998543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.95  E-value=2.7e-28  Score=200.58  Aligned_cols=249  Identities=17%  Similarity=0.120  Sum_probs=184.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|++.|.++|+ +++++++...                      +.+|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           6 FGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             ECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            79999999999999998886 4455544322                      246899999999999877899999999


Q ss_pred             CCC----------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        81 ~~~----------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      |..                ...+.+++++++ ...+++++||..+|+.....+.+|+.+..|.+.| .+|..+|.++...
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            863                234677888887 5678999999999988888889999999999887 9999999999877


Q ss_pred             CCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC---CcCCCceEEeeCCC
Q 023078          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (287)
Q Consensus       143 ~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~---~~~~~~~~~~~~~~  219 (287)
                      .....++|++..++... ......+.+.+.....+...  +....+++|++|+++++..++..   ....+++||++++.
T Consensus       143 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKG-NNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSS-CCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             hcccccccccceeeccC-Cccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            77777777777765533 23344555666666665543  34678999999999998887752   33356799999998


Q ss_pred             cccHHHHHHHHHHHhCC---C--CCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          220 YVTFDGLARACAKAAGF---P--EPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       220 ~~s~~~i~~~i~~~~g~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      .++..++++.+.+..+.   .  .+.+..++...+....     .++.+ .+|++|+++.|||+|..
T Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a-----~RP~~~~ld~~K~~~~~~~~~~~  281 (298)
T d1n2sa_         220 TTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPA-----SRPGNSRLNTEKFQRNFDLILPQ  281 (298)
T ss_dssp             CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSS-----CCCSBCCBCCHHHHHHHTCCCCB
T ss_pred             ceecHHHHHHHHhhhhccCccccccceeeeehhhcCccC-----CCccccccCHHHHHHHHCCCCCc
Confidence            99999999998776543   2  2233333333221111     11222 68999999999999864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1e-27  Score=197.80  Aligned_cols=257  Identities=17%  Similarity=0.143  Sum_probs=160.6

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHH-HHhhh---ccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSL---SAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~---~~~~~d~   75 (287)
                      ||||||||++|++.|+++|+ +|+++++-...... .      .+..  ..    ..|..+.+. ....+   ....+++
T Consensus         5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~------~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V------NLVD--LN----IADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H------HHHT--SC----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h------cccc--cc----hhhhccchHHHHHHhhhhcccchhh
Confidence            79999999999999999995 78888643322100 0      0000  01    112222111 11111   1137899


Q ss_pred             EEEccCCC--------------ccchHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHH
Q 023078           76 VYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (287)
Q Consensus        76 vi~~a~~~--------------~~~~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~  139 (287)
                      |+|+|+..              ..++.+++++++ ...++++.||..+|+........++....|.+.| .+|..+|.++
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence            99998753              234666777776 4446888888888776665556666666777777 9999999887


Q ss_pred             H----hcCCcEEEEccCceecCCCC-----CchhHHHHHHHHcCCCcc-cCCCCCceeeeeeHHHHHHHHHHHhcCCcCC
Q 023078          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (287)
Q Consensus       140 ~----~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  209 (287)
                      +    +.+++++++|++++|||.+.     ..+...+.+.+..++... ..+++...++|+|++|++.++..++++..  
T Consensus       152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--  229 (307)
T d1eq2a_         152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (307)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence            4    56899999999999999753     233455667777776543 34777888999999999999999988754  


Q ss_pred             CceEEeeCCCcccHHHHHHHHHHHhCCCCCeEEEcCCCCcCCCCcccccccccc-ccchhhHhhhhcccccc
Q 023078          210 RQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQV-IASLKTAFSVNMVKRSM  280 (287)
Q Consensus       210 ~~~~~~~~~~~~s~~~i~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~lg~~p~~  280 (287)
                      .+.||+++++..|++|+++.+.+..+.........+...        ....... ..|++|+++.+||+|..
T Consensus       230 ~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~d~~k~~~~~~~~p~~  293 (307)
T d1eq2a_         230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRAAGYDKPFK  293 (307)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCC
T ss_pred             ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccC--------CCCCceeeecCHHHHHHHHCCCCCC
Confidence            468999999999999999999887764432222221110        0000111 56999999999999975

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.4e-27  Score=184.55  Aligned_cols=184  Identities=16%  Similarity=0.212  Sum_probs=145.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||||++|+++++.|+++||+|++++|++++.....           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus         9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~   75 (205)
T d1hdoa_           9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (205)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----------ccccccccccccchhhHHHHhc--CCCEEEEEe
Confidence            699999999999999999999999999977743322           3679999999999999999999  999999998


Q ss_pred             CCCc---------cchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEE
Q 023078           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (287)
Q Consensus        81 ~~~~---------~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~il  149 (287)
                      |...         .++.+++++++  +++|||++||.++++.....      +.....++..|..+|+++++.+++|+++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------~~~~~~~~~~~~~~e~~l~~~~~~~tii  149 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PPRLQAVTDDHIRMHKVLRESGLKYVAV  149 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CGGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------cccccccchHHHHHHHHHHhcCCceEEE
Confidence            7632         34778999987  99999999998876443221      1111123478889999999999999999


Q ss_pred             ccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeC
Q 023078          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~  217 (287)
                      ||+.+++....+              ...+..++.....+++.+|+|++++.+++++...|+.+.++.
T Consensus       150 rp~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         150 MPPHIGDQPLTG--------------AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CCSEEECCCCCS--------------CCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ecceecCCCCcc--------------cEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            999998764321              112223455667899999999999999998876788777653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=1.6e-27  Score=197.15  Aligned_cols=233  Identities=12%  Similarity=0.088  Sum_probs=171.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||||++|+++|+++||+|++++|+.........   .........+++++.+|+.|.+.+.++++  +.+.+++++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~~   83 (312)
T d1qyda_           9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV---QMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISAL   83 (312)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH---HHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHH---HHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhhh
Confidence            7999999999999999999999999997654211100   00001114679999999999999999998  899999987


Q ss_pred             CC-----CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcEEEEccC
Q 023078           81 GR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPV  152 (287)
Q Consensus        81 ~~-----~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~~ilr~~  152 (287)
                      +.     +.....+++++++  +..++++.||.+++...      +..+..|...+ ..+..++++.++.+++++++||+
T Consensus        84 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~  157 (312)
T d1qyda_          84 AGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSN  157 (312)
T ss_dssp             CCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECC
T ss_pred             hhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchhhhhhHHHHHHHHhhcccccceEEeccc
Confidence            65     4456777777766  67788888887654322      22233344444 77888888888999999999999


Q ss_pred             ceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCce-EEeeCCCcccHHHHHHHHH
Q 023078          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACA  231 (287)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~i~~~i~  231 (287)
                      .+||+.... +...+......+..+.+++++++.++|+|++|+|++++.+++++...++. |++++++.+|++|+++.+.
T Consensus       158 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~  236 (312)
T d1qyda_         158 MFAGYFAGS-LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWE  236 (312)
T ss_dssp             EEHHHHTTT-SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeecCCccc-hhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHH
Confidence            999974321 11111112234455666788899999999999999999999987766665 5566567799999999999


Q ss_pred             HHhCCCCCeEEEcCC
Q 023078          232 KAAGFPEPELVHYNP  246 (287)
Q Consensus       232 ~~~g~~~~~~~~~~~  246 (287)
                      +.+|.+. +...++.
T Consensus       237 ~~~g~~~-~~~~i~~  250 (312)
T d1qyda_         237 RLSEQNL-DKIYISS  250 (312)
T ss_dssp             HHHTCCC-EECCBCS
T ss_pred             HHHCCCC-eEEECCH
Confidence            9999886 5555554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=2.5e-27  Score=195.10  Aligned_cols=233  Identities=14%  Similarity=0.147  Sum_probs=171.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      ||||||+|+++++.|+++|++|++++|++.........  .........+++++.+|+.+.+.+...++  +.+.++|++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~~   84 (307)
T d1qyca_           9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA--QLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVISTV   84 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH--HHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHH--HHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeecc
Confidence            79999999999999999999999999986652111100  00001113578999999999999999998  899999998


Q ss_pred             CC-CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhcCCcEEEEccCceec
Q 023078           81 GR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYG  156 (287)
Q Consensus        81 ~~-~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~~~~~~ilr~~~v~g  156 (287)
                      +. +.....++++++.  +++++++.|+.+.+.       .+.....+...+ ..+...+.++++.+++++++||+++||
T Consensus        85 ~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g  157 (307)
T d1qyca_          85 GSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG  157 (307)
T ss_dssp             CGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHH
T ss_pred             cccccchhhHHHHHHHHhccccceeeecccccc-------ccccccccccccccccccccchhhccCCCceecccceecC
Confidence            75 4456677888876  888898888765421       121222222233 667778888889999999999999999


Q ss_pred             CCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCce-EEeeCCCcccHHHHHHHHHHHhC
Q 023078          157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKAAG  235 (287)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~i~~~i~~~~g  235 (287)
                      +....  +..+.....++....+++.+++.++|+|++|+|++++.+++++...++. |++++++.+|+.|+++.+.+.+|
T Consensus       158 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G  235 (307)
T d1qyca_         158 YFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  235 (307)
T ss_dssp             HHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             CCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHC
Confidence            85321  1112222334455566678899999999999999999999987655554 56677788999999999999999


Q ss_pred             CCCCeEEEcCCC
Q 023078          236 FPEPELVHYNPK  247 (287)
Q Consensus       236 ~~~~~~~~~~~~  247 (287)
                      .+. .+..++.+
T Consensus       236 ~~~-~~~~~~~~  246 (307)
T d1qyca_         236 KTL-EKAYVPEE  246 (307)
T ss_dssp             SCC-EEEEECHH
T ss_pred             CCC-cEEECCHH
Confidence            876 66666554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-25  Score=175.91  Aligned_cols=185  Identities=18%  Similarity=0.187  Sum_probs=141.4

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||+|++|++.|+++|+  +|++++|++.+.....           ..+++...+|+.+.+.+.++++  ++|++||
T Consensus        20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~   86 (232)
T d2bkaa1          20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   86 (232)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence            79999999999999999984  8999999875532211           3578888899999999999998  8999999


Q ss_pred             ccCCC-------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHhc
Q 023078           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (287)
Q Consensus        79 ~a~~~-------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~~  142 (287)
                      +++..             ...+.+++++|.  ++++|||+||.++++.             +.+.| ++|..+|+.+.+.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~-------------~~~~Y~~~K~~~E~~l~~~  153 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL  153 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccC-------------ccchhHHHHHHhhhccccc
Confidence            99863             234677888876  8999999999876422             22346 9999999999988


Q ss_pred             CCc-EEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCcCCCceEEeeC
Q 023078          143 GVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (287)
Q Consensus       143 ~~~-~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~~~~~~  217 (287)
                      +.+ ++|+||+.+||++.......++...+....     .........|+++|+|++++.++..+.. ++.+.+.+
T Consensus       154 ~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         154 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             cccceEEecCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            875 999999999999755444444444443322     2223344679999999999999887663 45666653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=8.6e-24  Score=168.48  Aligned_cols=205  Identities=14%  Similarity=0.098  Sum_probs=142.3

Q ss_pred             CCcccchHHHHHHHHHHCCCe--EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~--V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||+++++.|+++|++  |+.++|++++.. .+           ..+++++.+|+.+.+.+.++++  ++|+|||
T Consensus         9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   74 (252)
T ss_dssp             ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-hc-----------cCCcEEEEeeeccccccccccc--cceeeEE
Confidence            799999999999999999965  666778766532 22           3578999999999999999998  9999999


Q ss_pred             ccCCC-----------------------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCc
Q 023078           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (287)
Q Consensus        79 ~a~~~-----------------------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~  127 (287)
                      +++..                             ..++.++++.+.  ..+++.+.|+..++.....      ....+..
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~~~~~~  148 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LNKLGNG  148 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GGGGGGC
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------ccccccc
Confidence            98752                             123556666655  6778888887654321110      0111112


Q ss_pred             cc-cchHHHHHHHHhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCC
Q 023078          128 RH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (287)
Q Consensus       128 ~~-~~k~~~E~~~~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  206 (287)
                      .+ ..+...+.+..+.+++++++||+++||+......      . ..+....   ......+++|++|+|++++.+++++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~------~-~~~~~~~---~~~~~~~~i~~~Dva~a~~~~l~~~  218 (252)
T d2q46a1         149 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE------L-LVGKDDE---LLQTDTKTVPRADVAEVCIQALLFE  218 (252)
T ss_dssp             CHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC------E-EEESTTG---GGGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             chhhhhhhhhhhhhcccccceeecceEEECCCcchhh------h-hhccCcc---cccCCCCeEEHHHHHHHHHHHhCCc
Confidence            22 5555566667788999999999999999632110      0 0001101   1123467999999999999999988


Q ss_pred             cCCCceEEeeCCC---cccHHHHHHHHHHHhC
Q 023078          207 KASRQVFNISGEK---YVTFDGLARACAKAAG  235 (287)
Q Consensus       207 ~~~~~~~~~~~~~---~~s~~~i~~~i~~~~g  235 (287)
                      ...|++||++++.   ..+++++.+.+.+..+
T Consensus       219 ~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         219 EAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             cccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            8788999998753   3567777776655443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=7.5e-23  Score=171.80  Aligned_cols=230  Identities=13%  Similarity=0.055  Sum_probs=163.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~d~vi~~   79 (287)
                      ||||||||++|++.|+++||+|++++|+.++....        ......+++++.+|+.|. +.+..++.  ++|++++.
T Consensus         9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--------~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~   78 (350)
T d1xgka_           9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--------ELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN   78 (350)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--------HHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--------hhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEee
Confidence            79999999999999999999999999987653210        011136899999999885 45677787  88888876


Q ss_pred             cCC----CccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccccchHHHHHHHHhcCCcEEEEccCc
Q 023078           80 NGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVY  153 (287)
Q Consensus        80 a~~----~~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~~~k~~~E~~~~~~~~~~~ilr~~~  153 (287)
                      ...    +.....++++++.  +++++++.||.........        .....++.+|...|.++.+.+++++++|++.
T Consensus        79 ~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~--------~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~  150 (350)
T d1xgka_          79 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP--------WPAVPMWAPKFTVENYVRQLGLPSTFVYAGI  150 (350)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS--------CCCCTTTHHHHHHHHHHHTSSSCEEEEEECE
T ss_pred             cccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc--------ccchhhhhhHHHHHHHHHhhccCceeeeece
Confidence            543    3345788899976  8899999998654322111        1112234788999999999999999999999


Q ss_pred             eecCCCCCchhHHHHHHHHcCC-CcccCCCCCceeeeeeH-HHHHHHHHHHhcCCc--CCCceEEeeCCCcccHHHHHHH
Q 023078          154 IYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARA  229 (287)
Q Consensus       154 v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~i~~~  229 (287)
                      ++++................+. ....+.+++..++++++ +|+++++..+++..+  ..|+.|++++ +.+|++|+++.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~  229 (350)
T d1xgka_         151 YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAA  229 (350)
T ss_dssp             EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHH
T ss_pred             eeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHH
Confidence            8886421110000000011111 12334556778888886 799999999986542  3678999986 56999999999


Q ss_pred             HHHHhCCCCCeEEEcCCCCcC
Q 023078          230 CAKAAGFPEPELVHYNPKEFD  250 (287)
Q Consensus       230 i~~~~g~~~~~~~~~~~~~~~  250 (287)
                      +.+++|++. ++.++|...+.
T Consensus       230 l~~~~G~~v-~~~~vp~~~~~  249 (350)
T d1xgka_         230 FSRALNRRV-TYVQVPKVEIK  249 (350)
T ss_dssp             HHHHHTSCE-EEEECSSCCCC
T ss_pred             HHHHHCCcc-eEEECCHHHHH
Confidence            999999886 88888876643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=1e-21  Score=153.18  Aligned_cols=167  Identities=19%  Similarity=0.158  Sum_probs=116.3

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      ||||||||++|++.|+++|+  +|++++|++...               .+.+   ..+..|..++.+.+. ..+|.|||
T Consensus         8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------------~~~~---~~~~~d~~~~~~~~~-~~~d~vi~   68 (212)
T d2a35a1           8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRL---DNPVGPLAELLPQLD-GSIDTAFC   68 (212)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTE---ECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------------cccc---cccccchhhhhhccc-cchheeee
Confidence            79999999999999999997  677777764331               1222   334445555555443 26899999


Q ss_pred             ccCCC--------------ccchHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHHh
Q 023078           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (287)
Q Consensus        79 ~a~~~--------------~~~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~~  141 (287)
                      ++|..              ...+.+++++++  ++++|+++||.++++.             +.++| .+|..+|+.+++
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~  135 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  135 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             eeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc
Confidence            98763              234677888877  8999999999877432             23456 899999999988


Q ss_pred             cCC-cEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          142 KGV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       142 ~~~-~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      .+. +++|+||+.+||+.........+      ..++....  ...+.+||++|+|++++.+++++.
T Consensus       136 ~~~~~~~I~Rp~~v~G~~~~~~~~~~~------~~~~~~~~--~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGPREEFRLAEIL------AAPIARIL--PGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT------TCCCC------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cccccceeeCCcceeCCcccccHHHHH------HHHHhhcc--CCCCcEEEHHHHHHHHHHHHcCCC
Confidence            887 59999999999997533221111      11111111  123466999999999999998765

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.55  E-value=3.6e-14  Score=111.72  Aligned_cols=188  Identities=18%  Similarity=0.187  Sum_probs=128.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+.+++.|+++|++|++.+|++++..+...          ..+.+.+.+|++|++++.++++..     .+|+
T Consensus        11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_          11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998766322211          246788999999998888776542     6999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +    .+.++..++  +..+++.+||....+            ......|
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~------------~~~~~~Y  148 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------NLGQANY  148 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------CTTCHHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC------------CCCCcch
Confidence            9999987422                    1    222333333  455666777643211            1112346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+|+++..+.||.+-.+... ...........+..++.         -+..++|+|+++..
T Consensus       149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedia~~v~f  218 (242)
T d1ulsa_         149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-KVPEKVREKAIAATPLG---------RAGKPLEVAYAALF  218 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-SSCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh-cCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHH
Confidence             89998887653       46899999999998776422 22233344444443331         24468999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  -+|+.+.+.+|..
T Consensus       219 L~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         219 LLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhchhhCCCCCcEEEECCCcc
Confidence            886432  3788999988754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.55  E-value=2.8e-14  Score=111.88  Aligned_cols=182  Identities=19%  Similarity=0.276  Sum_probs=124.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+.+++.|+++|++|++.+|+...                ..++..+.+|++|++++.++++..     ++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1          13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCcch----------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            8999999999999999999999999998765                246678899999998887776542     7999


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +.    +.++..+.  +..++|++||.......           .....|
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----------~~~~~Y  145 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQANY  145 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC-----------cccHHH
Confidence            9999987422                    12    22233333  55689999997653211           112236


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+|+++..+.||.+..+.. ..+.........+..++         .-+...+|+|+++..
T Consensus       146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~-~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~f  215 (237)
T d1uzma1         146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPA---------KRVGTPAEVAGVVSF  215 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-HHSCHHHHHHHGGGCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh-hccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             99998887653       4689999999998865421 01111222222222221         124678999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  -+|+.+.+.+|-
T Consensus       216 L~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         216 LASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCchhcCCcCCeEEECCCC
Confidence            886533  378899998773

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.54  E-value=1.6e-14  Score=114.38  Aligned_cols=193  Identities=17%  Similarity=0.243  Sum_probs=131.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+..     .++.....++..+.+|++|++++.++++..     .+|+
T Consensus        16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-----DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-----HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            799999999999999999999999999876532211     122333457889999999998888777642     7999


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+++....                    +.    +.++..++  +..++|++||...+...           .....|
T Consensus        91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~-----------~~~~~Y  159 (251)
T d2c07a1          91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------VGQANY  159 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC-----------CCCHHH
Confidence            9999987321                    12    22333333  56799999997653211           112236


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+|+++..+.||.+-.+.. ........+.+.+..++.         -+...+|+|+++..
T Consensus       160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~-~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~f  229 (251)
T d2c07a1         160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMT-DKISEQIKKNIISNIPAG---------RMGTPEEVANLACF  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccc-cccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence             99998887753       4689999999999877632 112233444444443321         24568999999999


Q ss_pred             HhcCCc--CCCceEEeeCCC
Q 023078          202 VLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++....  -+|+.+.+.+|-
T Consensus       230 L~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCchhCCCcCcEEEECCCc
Confidence            886533  378899988763

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=2.1e-14  Score=113.90  Aligned_cols=194  Identities=13%  Similarity=0.136  Sum_probs=130.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+..     .++.+...++..+++|+++++++.++++..     .+|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVV-----DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999876532211     223333457889999999998877776532     7999


Q ss_pred             EEEccCCCcc-------------------chHHHHH----hCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD-------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~-------------------~~~~l~~----a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||....                   +...+.+    .+.  +..++|++||...+..           ......| 
T Consensus        92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~  160 (255)
T d1fmca_          92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc-----------ccccccch
Confidence            9999987421                   1222222    222  5568899998764211           1112246 


Q ss_pred             cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       130 ~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      .+|...+.+.+       .+|+++..+.||.+-.+.......+...+.+.+..++.         -+..++|+|+++..+
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL  231 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            89998887653       46899999999988655211111223334444433321         245689999999999


Q ss_pred             hcCCc--CCCceEEeeCCC
Q 023078          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~  219 (287)
                      +....  -+|+.+.+.+|.
T Consensus       232 ~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         232 CSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCchhcCCcCCEEEECcCc
Confidence            86533  378899998885

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.53  E-value=3.3e-14  Score=112.54  Aligned_cols=192  Identities=16%  Similarity=0.105  Sum_probs=126.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+..        .+...++.++.+|+++++++.++++..     .+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_          11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--------RELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            799999999999999999999999999876633222        122356889999999998888777542     7999


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +.    +.++..++  +..++|++||...+..           ......|
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~-----------~~~~~~Y  151 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------LALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc-----------ccchhhH
Confidence            9999987422                    12    22333333  5679999999864211           1112246


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+++++..+.||.+..+     +    .........-.........+-....+|+|++++.
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~-----~----~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~f  222 (254)
T d1hdca_         152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP-----M----TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVK  222 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-----H----HHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-----c----chhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence             89998887653       46899999999987544     1    1111111110000000001111357999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  -+|+.+.+.+|-.
T Consensus       223 L~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         223 LLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhchhhCCCCCceEEeCCCcc
Confidence            986432  3789999988753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=3.4e-14  Score=111.91  Aligned_cols=191  Identities=16%  Similarity=0.190  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+..        .+...+...+.+|+++++++.++++..     ++|+
T Consensus        10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_          10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQAIS--------DYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------HHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            899999999999999999999999999876532211        122356788999999998877776542     6999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+|+....                    +    .+.++..+.  +..++|++||...+.+..           ....|
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~~~~Y  150 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG-----------GQANY  150 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----------CCHHH
Confidence            9999987422                    1    222333333  567899999987532111           12246


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+|+++..+.||.+-.+.. ..........+.+..++         .-+...+|+|+++..
T Consensus       151 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~f  220 (243)
T d1q7ba_         151 AAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT-RALSDDQRAGILAQVPA---------GRLGGAQEIANAVAF  220 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-HTSCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh-hhhhhhHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             99999887753       4689999999998754421 11112222333333222         124578999999999


Q ss_pred             HhcCCc--CCCceEEeeCCCc
Q 023078          202 VLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~~--~~~~~~~~~~~~~  220 (287)
                      ++....  -+|+.+++.+|..
T Consensus       221 L~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         221 LASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             HHSGGGTTCCSCEEEESTTSS
T ss_pred             HhCchhcCCcCCeEEECCCeE
Confidence            986533  3788999988753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.51  E-value=4.5e-14  Score=111.25  Aligned_cols=194  Identities=17%  Similarity=0.203  Sum_probs=129.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+++.....+.+.    ..+.....++.++.+|++|++++.++++.     -++|+
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS----KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            8999999999999999999999988765544222221    22233346788899999999888777653     27999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+|+....                    +    ++.++..++  +..++|++||...+-+.           .....|
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~-----------~~~~~Y  151 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQANY  151 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC-----------CCCHHH
Confidence            9999987432                    1    233334333  66799999997653211           112236


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+|+++..+.||.+-.+.. ..+.....+.+.+..++.         -+..++|+|+++..
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~---------R~~~p~dvA~~v~f  221 (244)
T d1edoa_         152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKKILGTIPLG---------RTGQPENVAGLVEF  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH-HTTCHHHHHHHHTSCTTC---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH-HHhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence             89999887753       4689999999998855421 111222334444433321         24568999999998


Q ss_pred             HhcCCc---CCCceEEeeCCC
Q 023078          202 VLGNEK---ASRQVFNISGEK  219 (287)
Q Consensus       202 ~~~~~~---~~~~~~~~~~~~  219 (287)
                      ++..+.   -+|+.+.+.+|-
T Consensus       222 La~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         222 LALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTTT
T ss_pred             HHCCchhcCCcCCeEEeCCCe
Confidence            863322   378899988774

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.51  E-value=1.5e-13  Score=109.29  Aligned_cols=196  Identities=17%  Similarity=0.164  Sum_probs=129.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.....+.+    ..++.....++..+.+|++|++++.++++.     -++|+
T Consensus        13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~----~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            899999999999999999999999999865422221    122233345678899999999888777753     27999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--C-CCcEEEEeeeeEeecCCCCCCCCCCCCCCC-c
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~-~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~  127 (287)
                      +||+||....                    +    ++.++..+.  + ..++|++||.....            ..|. .
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~------------~~~~~~  156 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI------------PWPLFV  156 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------------CCTTCH
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc------------cCcccc
Confidence            9999987421                    1    222333332  3 33588899875421            1222 2


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      .| .+|...+.+.+       .+++++..+.||.+..+...... .+.....+.+..++.         -+..++|+|++
T Consensus       157 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~  227 (261)
T d1geea_         157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YIGEPEEIAAV  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHH
T ss_pred             ccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHH
Confidence            36 99999887753       46899999999998665311110 011222333322221         24568999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCcc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      ++.++....  -+|+.+.+.+|..+
T Consensus       228 v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         228 AAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCCcCCeEEECCCeeC
Confidence            999886433  37899999888643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.50  E-value=1.2e-13  Score=109.18  Aligned_cols=195  Identities=18%  Similarity=0.220  Sum_probs=130.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+.+++.|+++|++|++.+|+.++..+...    ........++..+.+|+++++++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_          11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998766332211    111223457888999999998887777542     7999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Ccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~  128 (287)
                      +||+||....                    +    ++.++..++  +..++|++||....           ....+ ...
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~-----------~~~~~~~~~  155 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE-----------EVTMPNISA  155 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT-----------CCCSSSCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc-----------cccCccccc
Confidence            9999987422                    1    233344444  55689999886431           01112 234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+...... .+.....+.+..++.         -+..++|+|+++
T Consensus       156 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v  226 (251)
T d1vl8a_         156 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG---------RTGVPEDLKGVA  226 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS---------SCBCGGGGHHHH
T ss_pred             hHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHH
Confidence            6 88998887653       46899999999998766321110 012233333333321         234578999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      +.++....  -+|+.+.+.+|.
T Consensus       227 ~fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         227 VFLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCcEEEeCcCe
Confidence            99886433  378899998774

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=4.9e-14  Score=112.07  Aligned_cols=196  Identities=15%  Similarity=0.146  Sum_probs=118.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----C--Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~--~~d   74 (287)
                      |||++-||+.+++.|+++|++|++.+|++++..+..     .++.....++..+.+|+++++++.++++.    .  .+|
T Consensus        14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-----SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            899999999999999999999999999876633221     12223345788999999998877766643    1  489


Q ss_pred             EEEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||++|....                    +.    +.++..++  +..++|++||.......           .....
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------~~~~~  157 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SVGSI  157 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc-----------ccccc
Confidence            99999987321                    12    22333333  56799999997753211           11234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+...........+.+.+..+         ..-+..++|+|++++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedvA~~v~  228 (259)
T d1xq1a_         158 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKP---------LGRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             ccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCC---------CCCCcCHHHHHHHHH
Confidence            6 89998887653       468999999999886653211111111111111111         112456899999999


Q ss_pred             HHhcCC--cCCCceEEeeCCCcc
Q 023078          201 QVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       201 ~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      .++...  --+|+.+.+.+|-.+
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHhCchhcCCcCcEEEeCCCEEC
Confidence            988543  237889998887543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.50  E-value=5.5e-14  Score=110.58  Aligned_cols=186  Identities=17%  Similarity=0.175  Sum_probs=126.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|++++..+..        .+...++.++.+|++|++++.+++++.     .+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_          12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA--------AELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            799999999999999999999999999876532211        122356788999999998887776542     6999


Q ss_pred             EEEccCCCcc--------------------chHHHH----HhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~----~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +...+.    ..+.  +..++|++||...+.+.           .....|
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----------~~~~~Y  152 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY  152 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-----------ccccch
Confidence            9999987422                    122222    2233  55789999997652111           112236


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (287)
                       .+|...+.+.+       .+|+++..+.||.+-.+..     .++    .+ . .    ......-+..++|+|+++..
T Consensus       153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~-----~~~----~~-~-~----~~~pl~R~~~p~diA~~v~f  217 (244)
T d1nffa_         153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT-----DWV----PE-D-I----FQTALGRAAEPVEVSNLVVY  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG-----TTS----CT-T-C----SCCSSSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhH-----hhh----hH-H-H----HhccccCCCCHHHHHHHHHH
Confidence             99999887753       4689999999998865521     000    00 0 0    00011236789999999999


Q ss_pred             HhcCC--cCCCceEEeeCCCc
Q 023078          202 VLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       202 ~~~~~--~~~~~~~~~~~~~~  220 (287)
                      ++...  --+|+.+.+.+|..
T Consensus       218 L~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         218 LASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhChhhCCCcCCEEEECCCee
Confidence            98643  23788999988753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1e-13  Score=109.21  Aligned_cols=189  Identities=13%  Similarity=0.130  Sum_probs=128.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++.||+++++.|+++|++|++.+|++++..+.         .....++..+.+|++|++++++++++. ++|++||+
T Consensus        13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_          13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            79999999999999999999999999987653221         122357888999999999998888764 69999999


Q ss_pred             cCCCcc--------------------c----hHHHHHhC-C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-c
Q 023078           80 NGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-K  130 (287)
Q Consensus        80 a~~~~~--------------------~----~~~l~~a~-~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-~  130 (287)
                      |+....                    +    .+.++..+ +  +..++|++||.....            ..| ...| .
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------~~~~~~~Y~a  151 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------AVTNHSVYCS  151 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------CCTTBHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc------------cccchhhhhh
Confidence            987422                    1    22233322 2  456899999976421            112 2236 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      +|...+.+.+       .+++++..+.||.+..+..... ......+.+.+..++         --+...+|+|+++..+
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA~~v~fL  222 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHVVNAILFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            8998887653       4689999999998866521000 011122333333222         1256789999999998


Q ss_pred             hcCCc--CCCceEEeeCCC
Q 023078          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~  219 (287)
                      +....  -+|+.+.+.+|-
T Consensus       223 ~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         223 LSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HSGGGTTCCSCEEEESTTG
T ss_pred             hCchhCCcCCcEEEECccH
Confidence            86533  378899988764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.49  E-value=1.8e-13  Score=108.02  Aligned_cols=192  Identities=15%  Similarity=0.165  Sum_probs=123.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|++.....       ........++..+.+|++|++++.++++.     -++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-------~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1          11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-------AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH-------HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211       12233346788999999999888777653     27999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Ccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~  128 (287)
                      +||+||....                    +    .+.++..++  +..++|++||.....            ..| ...
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~------------~~~~~~~  151 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL------------KIEAYTH  151 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------------CCSSCHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc------------cCccccc
Confidence            9999997432                    1    222333333  567899999976421            112 223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+.................        .....-+..++|+|++++
T Consensus       152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~--------~~~l~r~~~pedvA~~v~  223 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM--------LQAIPRLQVPLDLTGAAA  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT--------TSSSCSCCCTHHHHHHHH
T ss_pred             chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHH--------hccCCCCCCHHHHHHHHH
Confidence            6 89998887652       4689999999998866532111111111111100        001112456899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCC
Q 023078          201 QVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .++....  -+|+.+.+.+|-
T Consensus       224 fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         224 FLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHTSGGGTTCCSCEEEESSSC
T ss_pred             HHhCchhcCCcCCeEEECCCE
Confidence            9886433  378899998774

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.49  E-value=8.2e-14  Score=110.98  Aligned_cols=199  Identities=17%  Similarity=0.192  Sum_probs=125.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccC-----Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d   74 (287)
                      |||++-||+++++.|+++|++|++.+|++....+.+.    ..+ .....++.++.+|++|++++.++++..     ++|
T Consensus        10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1          10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            8999999999999999999999999998654222211    111 222457888999999998888877642     699


Q ss_pred             EEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +    .+.++..++  +..++|++||......           ......
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------~~~~~~  154 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------SANKSA  154 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec-----------cCCcch
Confidence            99999997422                    1    222333333  5679999999865211           111223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcc-------cCCCCCceeeeeeHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVK  193 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~  193 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+..     ..............       .........-+..++
T Consensus       155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  229 (260)
T d1x1ta1         155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV-----EKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHHHCTTCCCBCHH
T ss_pred             hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhh-----hhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHH
Confidence            6 89998887653       4689999999998866531     11111100000000       000000011256799


Q ss_pred             HHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          194 DLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       194 Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      |+|++++.++....  -+|+.+++.+|-
T Consensus       230 diA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         230 QLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhChhhCCCcCCEEEECcch
Confidence            99999999886432  378899998773

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.47  E-value=1.8e-13  Score=108.76  Aligned_cols=194  Identities=15%  Similarity=0.134  Sum_probs=128.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc----C--Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~--~~d   74 (287)
                      |||++-||+++++.|+++|++|++.+|++++..+..     .++.....++..+.+|+++++++.++++.    .  .+|
T Consensus        14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-----TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            799999999999999999999999999876633221     22333345678899999998887776543    2  489


Q ss_pred             EEEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||++|....                    +.    +.++..++  +..++|++||......           ......
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------~~~~~~  157 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPYEAV  157 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc-----------cccccc
Confidence            99999987321                    12    22223332  4568999999764211           111223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCC----CCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      | .+|...+.+.+       .+++++..+.||.+-.+..    ...........+.+..++.         -+..++|+|
T Consensus       158 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~pedvA  228 (259)
T d2ae2a_         158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------RMGEPKELA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------SCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            6 89998887653       4689999999998865420    0111112223333332221         245689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++....  -+|+.+.+.+|-
T Consensus       229 ~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         229 AMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCCcCcEEEECCCe
Confidence            99999886533  378899998774

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=8.8e-14  Score=109.44  Aligned_cols=189  Identities=16%  Similarity=0.171  Sum_probs=127.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-CccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~d~vi~~   79 (287)
                      |||++.||+.+++.|+++|++|++.+|++++..+         ..+...++..+.+|++|++++++++++. ++|++||+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~---------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_          11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS---------LAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            7999999999999999999999999998765322         1122357889999999999999988865 68999999


Q ss_pred             cCCCcc--------------------chHHH----HHhC-C--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-c
Q 023078           80 NGREAD--------------------EVEPI----LDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-K  130 (287)
Q Consensus        80 a~~~~~--------------------~~~~l----~~a~-~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-~  130 (287)
                      ||....                    +...+    +..+ +  ...++|++||...+.            ..| ...| .
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~~~~Y~a  149 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV------------TFPNLITYSS  149 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------CCTTBHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc------------cCCccccccc
Confidence            987422                    12222    2221 1  345899999875421            112 2236 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHH
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (287)
                      +|...+.+.+       .+|+++..+.||.+-.+.... ...+.....+.+..++         .-+..++|+|+++..+
T Consensus       150 sKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peeva~~v~fL  220 (242)
T d1cyda_         150 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDVVNSILFL  220 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            9998887753       468999999999886541000 0001122233322221         1245689999999998


Q ss_pred             hcCCc--CCCceEEeeCCC
Q 023078          203 LGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       203 ~~~~~--~~~~~~~~~~~~  219 (287)
                      +....  -+|+.+.+.+|-
T Consensus       221 ~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         221 LSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HSGGGTTCCSSEEEESTTG
T ss_pred             hCchhcCcCCceEEeCcch
Confidence            86532  378899998774

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.46  E-value=1.3e-13  Score=108.82  Aligned_cols=191  Identities=13%  Similarity=0.102  Sum_probs=124.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++.. +..        .  ..+..++++|++|++++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~--------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1          11 TGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVA--------E--AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHH--------H--HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHH--------H--HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            79999999999999999999999999986542 111        1  125678899999998877776542     7999


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                    +...    ++..++  +..++|++||...+.+.           .....|
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-----------~~~~~Y  148 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAY  148 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHH
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-----------cccchh
Confidence            9999987422                    1222    233332  55689999998653111           112346


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       .+|...+.+.+       .+|+++..+.||.+-.+....     .......+.+.+..++         .-+...+|+|
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedia  219 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RRLGKPEEVA  219 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence             89999887653       468999999999875441000     0000011111111111         1245789999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      +++..++....  -+|+.+.+.+|-..|
T Consensus       220 ~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         220 EAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            99999986432  378899998875433

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.45  E-value=7.9e-14  Score=110.72  Aligned_cols=190  Identities=18%  Similarity=0.183  Sum_probs=127.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+.+++.|+++|++|++.+|++++..+..     .++.....++..+.+|++|++++.++++..     ++|+
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-----SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999876532211     223333457888999999998888776542     7999


Q ss_pred             EEEccCCCcc--------------------chHHH----HHhCC---CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPI----LDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l----~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||+||....                    +...+    +..+.   ...+++++||...+..           ......
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----------~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------NPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc-----------Cccccc
Confidence            9999987422                    12222    22222   3457889998764211           111234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHH---------------HHHcCCCcccCCCCCc
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------------RLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+     +...+..               .+.+..++        
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--------  217 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP-----MWAEIDRQVSEAAGKPLGYGTAEFAKRITL--------  217 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH-----HHHHHHHHHHHHHTCCTTHHHHHHHTTCTT--------
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh-----HHhhhhhhhHhhhcccchhHHHHHHhcCCC--------
Confidence            6 88998887753       46899999999987544     2222211               11111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                       .-+...+|+|++++.++....  -+|+.+.+.+|-.
T Consensus       218 -~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         218 -GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence             124678999999999886432  3788999988753

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.45  E-value=2.6e-13  Score=107.95  Aligned_cols=193  Identities=12%  Similarity=0.202  Sum_probs=126.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+..     ..+.....++..+.+|+++++++.++++..     .+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1          11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-----ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            799999999999999999999999999876532211     122333457889999999998887777642     7999


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                     +    ++.++..+.  +..++|++||...+...           .....
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-----------~~~~~  154 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  154 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC-----------cchHH
Confidence            9999986321                     1    222233332  56789999998753211           11223


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCC---------------CCchhHHHHHHHHcCCCcccCCCCCc
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN---------------YNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+..               .......+.+.+....|+        
T Consensus       155 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------  226 (260)
T d1zema1         155 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM--------  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT--------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC--------
Confidence            6 89998887653       4689999999998865520               000011122222222222        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCC
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~  218 (287)
                       .-+..++|+|+++..++....  -+|+.+.+.+|
T Consensus       227 -~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         227 -RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             124568999999999886532  36788887664

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.45  E-value=2.8e-13  Score=106.52  Aligned_cols=190  Identities=18%  Similarity=0.253  Sum_probs=126.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++.||+.+++.|+++|++|++.+|+.++..+..        .+...++.++++|++++++++++++..     .+|+
T Consensus        11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1          11 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--------AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999999999887643222        122457888999999998887776642     6999


Q ss_pred             EEEccCCCcc--------------------chHH----HHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------EVEP----ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~----l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+++....                    ....    ++..+++.+.++.+|+.+..            .......| .
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~~~~~~Y~~  150 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GAFGLAHYAA  150 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CHHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------cccCccccch
Confidence            9999886321                    1222    22223344444444443211            01112236 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHh
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  203 (287)
                      +|...|.+.+       .+|+++..+.||.+-.+.. ....+...+...+..++.         -+..++|+|+++..++
T Consensus       151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-~~~~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-AGLPPWAWEQEVGASPLG---------RAGRPEEVAQAALFLL  220 (241)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-TTSCHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-HhhhHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHh
Confidence            8999988763       4679999999998855421 112233344444433321         2457899999999999


Q ss_pred             cCCc--CCCceEEeeCCCc
Q 023078          204 GNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       204 ~~~~--~~~~~~~~~~~~~  220 (287)
                      ....  -+|+.+.+.+|..
T Consensus       221 S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         221 SEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             cchhCCCcCceEEeCCCcc
Confidence            6532  3788999988754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.45  E-value=1.5e-13  Score=109.14  Aligned_cols=189  Identities=16%  Similarity=0.176  Sum_probs=128.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.++..+.        ..+...++..+.+|+++++++.++++.     -.+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~--------~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_          11 TGSARGIGRAFAEAYVREGARVAIADINLEAARAT--------AAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            79999999999999999999999999986653221        123346788999999999888887764     27999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh-----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREAD--------------------EVEPILDA-----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a-----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|....                    +...+.++     ++  ...++|++||...+-.           ......
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~  151 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-----------EALVGV  151 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-----------cccccc
Confidence            9999997421                    12222222     12  3468999999764211           111234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHH---------------HHHcCCCcccCCCCCc
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------------RLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  185 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+.     ...+..               .+.+..++        
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------  218 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH-----WDGVDAKFADYENLPRGEKKRQVGAAVPF--------  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT-----HHHHHHHHHHHHTCCTTHHHHHHHHHSTT--------
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh-----hhhhhhhhhhhccCChHHHHHHHHhcCCC--------
Confidence            6 88998887653       468999999999886652     111111               11111111        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                       .-+...+|+|++++.++....  -+|+.+.+.+|..+|
T Consensus       219 -gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         219 -GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             -SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence             124568999999999885432  378999999887553

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.45  E-value=4.7e-13  Score=106.22  Aligned_cols=194  Identities=15%  Similarity=0.131  Sum_probs=127.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc----cC--Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK--GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~--~~d   74 (287)
                      |||++-||+++++.|+++|++|++.+|++.+..+..     ..+......+.++.+|+++.+++.++++    ..  .+|
T Consensus        12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_          12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-----EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            799999999999999999999999999876532221     2333344667888999999987766654    22  489


Q ss_pred             EEEEccCCCcc--------------------chHHHHHh----CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cc
Q 023078           75 VVYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~~~l~~a----~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~  127 (287)
                      +++|+++....                    +...+.++    +.  +..++|++||.....+            .| ..
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~------------~~~~~  154 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA------------LPSVS  154 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC------------CTTCH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc------------cccch
Confidence            99999987422                    12222322    22  6779999999875211            12 22


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      .| .+|...+.+.+       ..++++..+.||.+..+....     .........+....++         .-+...+|
T Consensus       155 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------gR~~~ped  225 (258)
T d1ae1a_         155 LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQE  225 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHH
Confidence            35 88988887753       468999999999997763111     1112233333332222         12578999


Q ss_pred             HHHHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       195 va~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      +|.++..++...  --+|+.+.+.+|-.
T Consensus       226 iA~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         226 VSALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence            999999999543  23788899887743

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.8e-13  Score=105.11  Aligned_cols=192  Identities=18%  Similarity=0.182  Sum_probs=127.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+         ..+...++.++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~---------~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1          12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---------LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765321         1222357889999999998888777642     7999


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~  129 (287)
                      +||+||....                     +    ++.++..++ +..++|++||.......           .....|
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~-----------~~~~~Y  151 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----------AQAVPY  151 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc-----------cCcchh
Confidence            9999985311                     1    222233333 34689999998753211           112246


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCCC-----CCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                       .+|...+.+.+       .+++++..+.||.+-.+..     ...-....++......++         .-+...+|+|
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eva  222 (250)
T d1ydea1         152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVG  222 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence             89998887653       4689999999998854410     000011122222222222         1246789999


Q ss_pred             HHHHHHhcC-CcCCCceEEeeCCCcc
Q 023078          197 RAFVQVLGN-EKASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~-~~~~~~~~~~~~~~~~  221 (287)
                      +++..++.. .--+|+.+.+.+|..+
T Consensus       223 ~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         223 AAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHHHHHhCccCCCcCCeEEECCCccc
Confidence            999988753 2237889999887543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.44  E-value=4.1e-13  Score=106.55  Aligned_cols=194  Identities=18%  Similarity=0.183  Sum_probs=127.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||++-||+.+++.|+++|++|++.+|+.++..+..     .++..  ...++..+.+|++|++++.++++..     .+
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   84 (258)
T d1iy8a_          10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   84 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999876532111     11111  1346788899999998887776542     79


Q ss_pred             cEEEEccCCCcc---------------------chHHHH----HhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-
Q 023078           74 DVVYDINGREAD---------------------EVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-  125 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~~~~l~----~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-  125 (287)
                      |++||+||....                     +...+.    ..++  +..++|++||...+-            ..| 
T Consensus        85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------~~~~  152 (258)
T d1iy8a_          85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR------------GIGN  152 (258)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------------BCSS
T ss_pred             CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc------------CCCC
Confidence            999999986311                     122222    3333  567899999976421            112 


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC-------chhHHHHHHHHcCCCcccCCCCCceeeee
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (287)
                      ...| .+|...+.+.+       .+++++..+.||.+..+....       .........+.+..++         .-+.
T Consensus       153 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~  223 (258)
T d1iy8a_         153 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---------KRYG  223 (258)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT---------CSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC---------CCCc
Confidence            2336 89998887652       468999999999886541000       0011122222222221         1246


Q ss_pred             eHHHHHHHHHHHhcCC--cCCCceEEeeCCCc
Q 023078          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      ..+|+|++++.++...  --+|+.+.+.+|..
T Consensus       224 ~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         224 EAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            7899999999988643  23788999988864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.44  E-value=3.6e-13  Score=106.51  Aligned_cols=191  Identities=21%  Similarity=0.232  Sum_probs=123.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.+...+..     ..+ ....++.++.+|++|++++.++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1          12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSV-GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHh-CCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            899999999999999999999999999876532111     111 11357889999999998877776542     7999


Q ss_pred             EEEccCCCcc--------------------ch----HHHHHhCC--CC-CcEEEEeeeeEeecCCCCCCCCCCCCCC-Cc
Q 023078           76 VYDINGREAD--------------------EV----EPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDP-KS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~----~~l~~a~~--~~-~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~  127 (287)
                      +||+||....                    +.    +.++..++  +. .++|++||...+-            ..| ..
T Consensus        86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~------------~~~~~~  153 (251)
T d1zk4a1          86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------------GDPSLG  153 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------------CCTTCH
T ss_pred             EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec------------cCCCch
Confidence            9999987422                    12    22333333  33 4789999876421            112 22


Q ss_pred             cc-cchHHHHHHH---------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcC-CCcccCCCCCceeeeeeHHHHH
Q 023078          128 RH-KGKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       128 ~~-~~k~~~E~~~---------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      .| .+|...+.+.         ..+|+++..+.||.+-.+.........   ..... ..++       .--+..++|+|
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~p-------l~R~~~pedvA  223 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE---EAMSQRTKTP-------MGHIGEPNDIA  223 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH---HHHTSTTTCT-------TSSCBCHHHHH
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH---HHHHHHhCCC-------CCCCcCHHHHH
Confidence            36 8888776543         245899999999988654210000000   11111 1111       11256789999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCC
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ++++.++....  -+|+.+.+.+|-
T Consensus       224 ~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         224 YICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCCcCcEEEECccc
Confidence            99999886533  378899998774

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.44  E-value=4e-13  Score=106.73  Aligned_cols=193  Identities=20%  Similarity=0.243  Sum_probs=127.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+..     .++.....++..+.+|++|++++.++++..     ++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-----KELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999876532221     223333457889999999998887776542     6999


Q ss_pred             EEEccCCCcc--------------------chHHHHHh----CC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-C
Q 023078           76 VYDINGREAD--------------------EVEPILDA----LP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-K  126 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a----~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~  126 (287)
                      +||+||....                    +...+.++    +.    +..++|.+||...+.+            .| .
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~------------~~~~  150 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG------------VVHA  150 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC------------CTTC
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc------------cccc
Confidence            9999987421                    22223332    22    4467899988764211            12 2


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC----------CchhHHHHHHHHcCCCcccCCCCCceee
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      ..| .+|...+.+.+       .+++++..+.||.+-.+...          ....+.....+.+..|+         --
T Consensus       151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl---------gR  221 (257)
T d2rhca1         151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI---------GR  221 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT---------SS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC---------CC
Confidence            236 99998887753       35799999999988543100          00011122233332222         12


Q ss_pred             eeeHHHHHHHHHHHhcCC--cCCCceEEeeCCC
Q 023078          189 LGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~  219 (287)
                      +..++|+|+++..++...  --+|+.+.+.+|-
T Consensus       222 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         222 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            466899999999998643  2378899998763

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.43  E-value=1.2e-12  Score=102.51  Aligned_cols=183  Identities=15%  Similarity=0.202  Sum_probs=121.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccCCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~d~vi~~   79 (287)
                      |||++-||+.+++.|+++|++|++.+|+++...              ..+.+++.+|+++. +.+.+.+.  ++|++||+
T Consensus        10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn   73 (234)
T d1o5ia_          10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN   73 (234)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence            799999999999999999999999999865422              23556788999763 55555555  79999999


Q ss_pred             cCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      ||....                    +    ++.++..++  +..++|.+||......           ......| .+|
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~-----------~~~~~~Y~asK  142 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----------IENLYTSNSAR  142 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc-----------ccccccchhHH
Confidence            986322                    1    222333333  5568999998754211           1112235 889


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcC
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  205 (287)
                      ...+.+.+       .+|+++..+.||.+-.+...........+.+.+..++         .-+...+|+|+++..++..
T Consensus       143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~S~  213 (234)
T d1o5ia_         143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM---------RRMAKPEEIASVVAFLCSE  213 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCh
Confidence            98886652       4689999999998866631111111222333333222         1256689999999998864


Q ss_pred             Cc--CCCceEEeeCCC
Q 023078          206 EK--ASRQVFNISGEK  219 (287)
Q Consensus       206 ~~--~~~~~~~~~~~~  219 (287)
                      ..  -+|+++.+.+|-
T Consensus       214 ~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCCcCcEEEECccc
Confidence            33  378899998774

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.4e-13  Score=111.45  Aligned_cols=198  Identities=11%  Similarity=0.168  Sum_probs=124.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+...+ ....+ .....++..+.+|++|++++.++++.     -.+|
T Consensus        18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~e-l~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   96 (297)
T d1yxma1          18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE-LQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN   96 (297)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeE
Confidence            79999999999999999999999999987652211100 00000 01135788899999999888877653     2799


Q ss_pred             EEEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+|+....                    +.    +.++..+.  +..++|.+|+....+            ......
T Consensus        97 iLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~------------~~~~~~  164 (297)
T d1yxma1          97 FLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG------------FPLAVH  164 (297)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC------------CTTCHH
T ss_pred             EEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc------------cccccc
Confidence            99999986421                    12    22333333  455677776532210            011234


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCC---chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|...+.+.+       .+|+++..+.||.+..+....   .....+.....+..++         .-+...+|+|+
T Consensus       165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~  235 (297)
T d1yxma1         165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSS  235 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            5 88998887653       468999999999987663111   1111111111111111         12456899999


Q ss_pred             HHHHHhcCCc--CCCceEEeeCCCc
Q 023078          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +++.++....  -+|+.+.+.+|..
T Consensus       236 ~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         236 VVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhcCcCCcEEEeCcChh
Confidence            9999986432  3789999998864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.3e-14  Score=112.90  Aligned_cols=202  Identities=16%  Similarity=0.171  Sum_probs=128.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh--hcCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+...     ++.+  ...++.++.+|+++++++.++++..     ++
T Consensus         9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (254)
T d2gdza1           9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKA-----ALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998765321110     1111  1346788999999998888776532     69


Q ss_pred             cEEEEccCCCccc----------------hHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cccc-c
Q 023078           74 DVVYDINGREADE----------------VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-K  130 (287)
Q Consensus        74 d~vi~~a~~~~~~----------------~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~~~-~  130 (287)
                      |++||+|+.....                .+.++..+.     ...++|++||...+-            ..| ...| .
T Consensus        84 DilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~------------~~~~~~~Y~a  151 (254)
T d2gdza1          84 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM------------PVAQQPVYCA  151 (254)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------------CCTTCHHHHH
T ss_pred             CeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc------------CCCCccchHH
Confidence            9999999985321                223334333     125699999976421            112 2236 8


Q ss_pred             chHHHHHHH---------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCccc---CCCCCceeeeeeHHHHHHH
Q 023078          131 GKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI---PGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       131 ~k~~~E~~~---------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~Dva~~  198 (287)
                      +|...+.+.         ..+++++..+.||.+-.+.     ...+......+.....   ..+.....-+...+|+|++
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  226 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI-----LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH-----HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh-----hhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            888776553         2468999999999874431     1110000000000000   0000001124568999999


Q ss_pred             HHHHhcCCcCCCceEEeeCCCcccHH
Q 023078          199 FVQVLGNEKASRQVFNISGEKYVTFD  224 (287)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~s~~  224 (287)
                      ++.++..+.-+|+.+.+.+|..+.++
T Consensus       227 v~fL~s~~~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         227 LITLIEDDALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             HHHHHcCCCCCCCEEEECCCCeeecc
Confidence            99999876668999999998876554

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.40  E-value=3.5e-12  Score=101.35  Aligned_cols=194  Identities=20%  Similarity=0.196  Sum_probs=125.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||.++++.|+++|++|++.+++.....+..    ...+.....++..+.+|++|++++.+.++.     -.+|+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            899999999999999999999998887765532221    122233345788999999998887776653     27999


Q ss_pred             EEEccCCCccc------------------------hHHHHHhCCCCCcEEEEeeee-EeecCCCCCCCCCCCCCC-Cccc
Q 023078           76 VYDINGREADE------------------------VEPILDALPNLEQFIYCSSAG-VYLKSDLLPHCETDTVDP-KSRH  129 (287)
Q Consensus        76 vi~~a~~~~~~------------------------~~~l~~a~~~~~~~i~~Ss~~-~y~~~~~~~~~e~~~~~p-~~~~  129 (287)
                      +||++|.....                        .+.++..++...+.+.++|.. ...            ..| ...|
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~------------~~~~~~~Y  155 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT------------GIPNHALY  155 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC------------SCCSCHHH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc------------CCCCchhH
Confidence            99999974221                        222333344334565565543 211            111 1235


Q ss_pred             -cchHHHHHHHH-------hcCCcEEEEccCceecCC------------CCCchhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       130 -~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                       .+|...+.+.+       ..|+++..+.||.+-.+.            ........+...+.+..++         .-+
T Consensus       156 ~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~  226 (259)
T d1ja9a_         156 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL---------KRI  226 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT---------SSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC---------CCC
Confidence             88998887653       468999999999885431            0011112233333333332         135


Q ss_pred             eeHHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ...+|+|+++..++....  -+|+.+.+.+|.
T Consensus       227 g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         227 GYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            678999999999987643  378889888764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.40  E-value=9.9e-13  Score=105.06  Aligned_cols=197  Identities=15%  Similarity=0.151  Sum_probs=128.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+.+++.|+++|++|++.+|+.++..+..     .++. ...++.++.+|++|++++.++++.     -.+|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1          12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhc-CCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            799999999999999999999999999876532211     0111 124577889999999888887753     27999


Q ss_pred             EEEccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-
Q 023078           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (287)
Q Consensus        76 vi~~a~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-  126 (287)
                      +||++|....                      +    ++.++..+.  +..++|++||...+..           ..+. 
T Consensus        86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~-----------~~~~~  154 (268)
T d2bgka1          86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA-----------GEGVS  154 (268)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC-----------CTTSC
T ss_pred             eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc-----------ccccc
Confidence            9999985211                      1    222333333  5568899988764211           1122 


Q ss_pred             ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       127 ~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ..| .+|...+.+.+       .+|+++..+.||.+-.+.....+  .............. .      .--+...+|+|
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~------~gr~~~pedvA  227 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-L------KGTLLRAEDVA  227 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-S------CSCCCCHHHHH
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-c------CCCCcCHHHHH
Confidence            246 88999887653       46899999999998776421111  11111111111110 0      01245689999


Q ss_pred             HHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                      ++++.++...  --+|+.+.+.+|-..
T Consensus       228 ~~v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         228 DAVAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhChhhCCccCceEEECcCccc
Confidence            9999998643  237899999888653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.39  E-value=4.9e-13  Score=105.82  Aligned_cols=194  Identities=15%  Similarity=0.174  Sum_probs=124.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC-----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+++...+..        .+...+..++.+|+++++++.++++..     .+|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_          12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA--------AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--------HHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            899999999999999999999999999876532211        122456788999999988777776542     7999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-  129 (287)
                      +||+||....                    +    .+.++..++ +..++|++||...+..           ......| 
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~-----------~~~~~~Y~  152 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-----------IEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC-----------CTTBHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC-----------cccccccc
Confidence            9999997422                    1    233344444 4578999999764211           1112346 


Q ss_pred             cchHHHHHHHH-------h--cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          130 KGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       130 ~~k~~~E~~~~-------~--~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      .+|...+.+.+       .  +++++..+.||.+..+.....+.....+.......     .....--+..++|+|++++
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-----~~~~~gr~~~pedvA~~v~  227 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP-----KLNRAGRAYMPERIAQLVL  227 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT-----TTBTTCCEECHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCc-----cccccCCCCCHHHHHHHHH
Confidence            88988776642       2  35899999999886541000000000011111110     0001113677899999999


Q ss_pred             HHhcCCc--CCCceEEeeCC
Q 023078          201 QVLGNEK--ASRQVFNISGE  218 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~  218 (287)
                      .++....  -+|+.+++.+|
T Consensus       228 fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         228 FLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHSGGGTTCCSCEEEESSS
T ss_pred             HHhChhhCCCcCcEEEECcc
Confidence            9886433  37889998776

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2.7e-12  Score=100.97  Aligned_cols=191  Identities=13%  Similarity=0.097  Sum_probs=126.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-CCccEEEEc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~d~vi~~   79 (287)
                      |||++-||+++++.|+++|++|++.+|++++..+...          ..+++...+|+.+.+.+....+. ..+|.+||+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1          12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccccccccceeEEec
Confidence            7999999999999999999999999998766332221          35788888999887666655543 379999999


Q ss_pred             cCCCcc--------------------chHHH----HHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           80 NGREAD--------------------EVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        80 a~~~~~--------------------~~~~l----~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      +|....                    +...+    +..+.  +..++|++||...-          .........| .+|
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK  151 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence            987432                    12222    22222  55689999886420          0111222346 899


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCC-----chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      ...+.+.+       .+|+++..+.||.+-.|....     .........+.+..++         .-+...+|+|+++.
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~  222 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCV  222 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            99888763       468999999999886652100     0011122232332222         13567899999999


Q ss_pred             HHhcCCc--CCCceEEeeCCCc
Q 023078          201 QVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       201 ~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      .++....  -.|+.+.+.+|..
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhChhhCCCcCceEEeCCCcC
Confidence            9997533  3788999988753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.36  E-value=6e-12  Score=99.85  Aligned_cols=195  Identities=12%  Similarity=0.090  Sum_probs=123.2

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|  -||+++++.|+++|++|++.+|+++... ..     .+......+...+.+|++|++++.++++.     -++
T Consensus        14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP-EA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH-HH-----HHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            79987  6999999999999999998888754321 11     11222234677899999999888777653     269


Q ss_pred             cEEEEccCCCcc------------------------chHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~------------------------~~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+++....                        +...+.+++.    ...++|++||......           ...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-----------~~~  156 (256)
T d1ulua_          88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (256)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-----------CCC
Confidence            999999986321                        1122233321    3357899998764211           111


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCc-hhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       .+|+++..+.||.+..+..... ........+.+..++.         -+..++|+|
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA  227 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------RNITQEEVG  227 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            2346 89998887753       4689999999998877642211 1122333333333321         145689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      +++..++....  -+|+.+.+.+|..+
T Consensus       228 ~~v~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         228 NLGLFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhCCccCCeEEECcCEeC
Confidence            99999886533  37889999887543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.35  E-value=1.4e-12  Score=103.64  Aligned_cols=200  Identities=15%  Similarity=0.197  Sum_probs=127.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||+++++.|+++|++|++.+|+.++..+...    ....+...++..+.+|+++++++.++++.     -.+|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTE----KVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHH----HHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            7999999999999999999999999998876332211    11122345788999999999888777653     26999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC---CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS  127 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~  127 (287)
                      +||+++....                    +    .+.++..+.   ...+++.+|+.........     .....| ..
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-----~~~~~~~~~  165 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----SLNGSLTQV  165 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----ETTEECSCH
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-----ccccCcccc
Confidence            9999986421                    1    122233332   3345555555433111000     000111 22


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      .| .+|...+.+.+       .+|+++..+.||.+-.+.. ....+.......+..++.         -+..++|+|+++
T Consensus       166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~---------R~g~pedvA~~v  235 (260)
T d1h5qa_         166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDHQASNIPLN---------RFAQPEEMTGQA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG-GGSCHHHHHHHHHTCTTS---------SCBCGGGGHHHH
T ss_pred             chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch-hccCHHHHHHHHhcCCCC---------CCcCHHHHHHHH
Confidence            36 88998887653       4789999999998865531 112233344444433321         135589999999


Q ss_pred             HHHhcCCc--CCCceEEeeCCC
Q 023078          200 VQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       200 ~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      ..++....  -+|+.+.+.+|.
T Consensus       236 ~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         236 ILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHhcchhCCCcCceEEECCCe
Confidence            99886533  378899998875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.34  E-value=1.6e-12  Score=102.02  Aligned_cols=172  Identities=15%  Similarity=0.141  Sum_probs=116.5

Q ss_pred             CCcccchHHHHHHHHHHCCCe-------EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---   70 (287)
                      |||++-||+++++.|+++|++       |++.+|+.....+..     .++......+.++.+|++|++++.++++.   
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-----~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-----LECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-----HHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999987       888888866532211     12222345678899999999887776653   


Q ss_pred             --CCccEEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           71 --KGFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        71 --~~~d~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                        -.+|++||+||....                    +    ++.++..++  +..++|++||...+.+.          
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------  151 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----------  151 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC----------
Confidence              269999999987421                    1    233344443  56789999998653111          


Q ss_pred             CCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       123 ~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                       .....| .+|...+.+.+       .+|+++..+.||.+-.+...               .+    ..+....+...+|
T Consensus       152 -~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~---------------~~----~~~~~~~~~~Ped  211 (240)
T d2bd0a1         152 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG---------------KV----DDEMQALMMMPED  211 (240)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC---------------CC----CSTTGGGSBCHHH
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh---------------hc----CHhhHhcCCCHHH
Confidence             112346 88988877653       46899999999988655210               00    0111123466899


Q ss_pred             HHHHHHHHhcCCc
Q 023078          195 LARAFVQVLGNEK  207 (287)
Q Consensus       195 va~~~~~~~~~~~  207 (287)
                      +|++++.++..+.
T Consensus       212 vA~~v~~l~s~~~  224 (240)
T d2bd0a1         212 IAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHTSCT
T ss_pred             HHHHHHHHHcCCc
Confidence            9999999988654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.34  E-value=3.5e-11  Score=96.19  Aligned_cols=196  Identities=16%  Similarity=0.123  Sum_probs=126.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+.+    ...+.+....+.++.+|+++++++.+.++.     -++|+
T Consensus        24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHH----HHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            899999999999999999999999998865432221    122333356788999999998887777653     27899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-c
Q 023078           76 VYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~  130 (287)
                      +||+++....                    +    .+.++..+....+.++++|....  .        ........| .
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~--~--------~~~~~~~~Y~a  169 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ--A--------KAVPKHAVYSG  169 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT--C--------SSCSSCHHHHH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc--c--------ccccchhhHHH
Confidence            9999987422                    1    23334445544577777765421  0        011122346 8


Q ss_pred             chHHHHHHHH-------hcCCcEEEEccCceecCCC----------CCch-hHHHHH-HHHcCCCcccCCCCCceeeeee
Q 023078          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----------YNPV-EEWFFH-RLKAGRPIPIPGSGIQVTQLGH  191 (287)
Q Consensus       131 ~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~----------~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~i~  191 (287)
                      +|...+.+.+       .+|+++..+.||.+-.+..          .... .....+ ...+..++         --+..
T Consensus       170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~  240 (272)
T d1g0oa_         170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---------RRVGL  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---------CSCBC
T ss_pred             HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---------CCCcC
Confidence            8998887753       4689999999998854310          0000 000111 11111111         13567


Q ss_pred             HHHHHHHHHHHhcCCc--CCCceEEeeCCC
Q 023078          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (287)
Q Consensus       192 ~~Dva~~~~~~~~~~~--~~~~~~~~~~~~  219 (287)
                      .+|+|.++..++....  -+|+.+.+.+|.
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            8999999999986533  378899998875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.34  E-value=4.4e-12  Score=100.98  Aligned_cols=195  Identities=15%  Similarity=0.147  Sum_probs=121.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhh---hcCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+..     .++..   ...++.++.+|+++++++.++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_          11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999876532211     11111   1235889999999998888777542     7


Q ss_pred             ccEEEEccCCCcc------------------------c----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~  123 (287)
                      +|++||++|....                        +    ++.++..++ +..++|.++|....           ...
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~-----------~~~  154 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASG-----------LHA  154 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSS-----------SSC
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccc-----------ccc
Confidence            9999999986210                        1    122222233 33456666654320           011


Q ss_pred             CCC-ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--------hHHHHHHHHcCCCcccCCCCCce
Q 023078          124 DPK-SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQV  186 (287)
Q Consensus       124 ~p~-~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  186 (287)
                      .|. ..| .+|...+.+.+       .+|+++..+.||.+-.+......        .......+.+..++         
T Consensus       155 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------  225 (264)
T d1spxa_         155 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA---------  225 (264)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT---------
T ss_pred             CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC---------
Confidence            222 336 89998887653       46899999999998665311100        00111111221111         


Q ss_pred             eeeeeHHHHHHHHHHHhcCC---cCCCceEEeeCCCc
Q 023078          187 TQLGHVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (287)
Q Consensus       187 ~~~i~~~Dva~~~~~~~~~~---~~~~~~~~~~~~~~  220 (287)
                      .-+...+|+|+++..++..+   --+|+.+.+.+|..
T Consensus       226 ~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         226 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            12456899999999988632   24788999988754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.31  E-value=2.2e-12  Score=102.04  Aligned_cols=188  Identities=14%  Similarity=0.083  Sum_probs=120.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||+.+++.|+++|++|++.+|+.+...+ +        ..  ....+..+|+.+.+++.++++.     -++|+
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~-~--------~~--~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-L--------EA--FAETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-H--------HH--HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H--------Hh--hhCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            8999999999999999999999999997665321 1        11  1112345677776555444432     17999


Q ss_pred             EEEccCCCcc---------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-c
Q 023078           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (287)
Q Consensus        76 vi~~a~~~~~---------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~  127 (287)
                      +||+||....                     +    ++.++..++  +..++|++||...+..            .|. .
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~------------~~~~~  142 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP------------WKELS  142 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC------------CTTCH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc------------ccccc
Confidence            9999875321                     1    122233333  5678999999764211            122 2


Q ss_pred             cc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-------hHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       128 ~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                      .| .+|...+.+.+       .+++++..+.||.+-.+......       .+.....+.+..++.         -+...
T Consensus       143 ~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R~g~p  213 (252)
T d1zmta1         143 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------RLGTQ  213 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------SCBCH
T ss_pred             ccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------CCcCH
Confidence            36 89998887653       46899999999998765321111       112223333322221         14568


Q ss_pred             HHHHHHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          193 KDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +|+|+++..++....  -+|+.+.+.+|-.
T Consensus       214 edvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         214 KELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            999999999986543  3788999988753

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.30  E-value=9.6e-12  Score=98.83  Aligned_cols=180  Identities=16%  Similarity=0.126  Sum_probs=117.2

Q ss_pred             CCcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccC----CccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~~d~   75 (287)
                      |||+|.||..++++|+++|+ +|++++|+...... .. ....++.....++.++.+|++|.+++.++++..    .+|.
T Consensus        15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~-~~-~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~   92 (259)
T d2fr1a1          15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-AG-ELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA   92 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-HH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHH-HH-HHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence            79999999999999999998 58888886433111 00 011223333567899999999999888877642    5899


Q ss_pred             EEEccCCCcc--------------------chHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           76 VYDINGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        76 vi~~a~~~~~--------------------~~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      |+|+++....                    +..++.++++  +..++|++||....-+...           ...| .+|
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~-----------~~~YaAak  161 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG-----------LGGYAPGN  161 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-----------CTTTHHHH
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc-----------cHHHHHHH
Confidence            9999987322                    2444556555  6678999999875311111           1235 888


Q ss_pred             HHHHHHH---HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc
Q 023078          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (287)
Q Consensus       133 ~~~E~~~---~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  207 (287)
                      ...+.+.   +..|++++.+.||.+.+++.....   ..      ..+.     ..-...+..+++++++..++....
T Consensus       162 a~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~---~~------~~~~-----~~G~~~~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         162 AYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP---VA------DRFR-----RHGVIEMPPETACRALQNALDRAE  225 (259)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCBC---------------------CT-----TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HhHHHHHHHHHhCCCCEEECCCCcccCCccccch---HH------HHHH-----hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            8877765   457899999999988776421110   00      0010     011356789999999999988755

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.3e-12  Score=101.22  Aligned_cols=170  Identities=15%  Similarity=0.153  Sum_probs=115.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+.+++.|+++|++|++.+|+.++..+..     .+......++..+.+|++|++++.++++.     -.+|+
T Consensus        13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_          13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-----AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            799999999999999999999999999876632221     12233356789999999999888776652     26999


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-cc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SR  128 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~~  128 (287)
                      +||++|....                    +    ++.++..+.  +..++|++||...+.            ..|. ..
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~------------~~~~~~~  155 (244)
T d1yb1a_          88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV------------SVPFLLA  155 (244)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC------------CHHHHHH
T ss_pred             eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC------------CCCCcHH
Confidence            9999987422                    1    222333333  567899999987531            1222 23


Q ss_pred             c-cchHHHHHHHH-------h---cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          129 H-KGKLNTESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~---~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      | .+|.+...+.+       .   .|+.++.+.||.+-.+....             ..       .....++..+|+|+
T Consensus       156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-------------~~-------~~~~~~~~pe~va~  215 (244)
T d1yb1a_         156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-------------PS-------TSLGPTLEPEEVVN  215 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-------------TH-------HHHCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-------------cC-------ccccCCCCHHHHHH
Confidence            6 88998776642       1   47999999999874442111             00       01123456899999


Q ss_pred             HHHHHhcCCc
Q 023078          198 AFVQVLGNEK  207 (287)
Q Consensus       198 ~~~~~~~~~~  207 (287)
                      .+...+...+
T Consensus       216 ~i~~~~~~~~  225 (244)
T d1yb1a_         216 RLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHhcCC
Confidence            9988777643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.28  E-value=1.6e-11  Score=99.32  Aligned_cols=196  Identities=17%  Similarity=0.172  Sum_probs=123.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||+|.||+++++.|+++|++|++.+|+..+..+...    .........+..+.+|+++.+.+.++++.     .++|+
T Consensus        31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~----~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            7999999999999999999999999998765322211    01112245678899999999887766543     27999


Q ss_pred             EEEccCCCccc--------------------hHHHHHh----C--C-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           76 VYDINGREADE--------------------VEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        76 vi~~a~~~~~~--------------------~~~l~~a----~--~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      +||++|.....                    ...+...    .  . ....++.+|+.......           .....
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~-----------~~~~~  175 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------GFVVP  175 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-----------cccch
Confidence            99999874321                    1111111    1  1 34456666655431111           11123


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch--hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (287)
                      | .+|...+.+.+       .+|+++..|.||.+-.+......  .........+..++.         -+...+|+|++
T Consensus       176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~  246 (294)
T d1w6ua_         176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANL  246 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHH
Confidence            6 88998887753       46899999999999766321110  111233333333221         24568999999


Q ss_pred             HHHHhcCCc--CCCceEEeeCCCc
Q 023078          199 FVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +..++....  -+|+++.+.+|..
T Consensus       247 v~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         247 AAFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHHhCchhcCCCCcEEEECCChh
Confidence            999986533  4789999988864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.26  E-value=7.7e-12  Score=99.97  Aligned_cols=197  Identities=16%  Similarity=0.168  Sum_probs=122.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh---cCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||++-||+.+++.|+++|++|++.+|++++..+..     .++.+.   ..++..+.+|+++++++.++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_          11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999876532111     111111   235788999999998887776532     7


Q ss_pred             ccEEEEccCCCcc------------------------chHHH----HHhCC-CCCcEEEEeee-eEeecCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD------------------------EVEPI----LDALP-NLEQFIYCSSA-GVYLKSDLLPHCETDT  122 (287)
Q Consensus        73 ~d~vi~~a~~~~~------------------------~~~~l----~~a~~-~~~~~i~~Ss~-~~y~~~~~~~~~e~~~  122 (287)
                      +|++||++|....                        +...+    +..++ +...+|.++|. +..            .
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~------------~  153 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP------------Q  153 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS------------S
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc------------c
Confidence            9999999986321                        11112    22222 33455555553 321            1


Q ss_pred             CCC-Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCC-----CCchhHHHHHHHHcC-CCcccCCCCCcee
Q 023078          123 VDP-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAG-RPIPIPGSGIQVT  187 (287)
Q Consensus       123 ~~p-~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  187 (287)
                      ..| ...| .+|...+.+.+       .+|+++..+.||.+-.+..     ............... ..+++       .
T Consensus       154 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------g  226 (272)
T d1xkqa_         154 AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-------G  226 (272)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------S
T ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-------C
Confidence            112 2236 89998887653       4689999999998865521     000111111111111 11111       1


Q ss_pred             eeeeHHHHHHHHHHHhcCC---cCCCceEEeeCCCcc
Q 023078          188 QLGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (287)
Q Consensus       188 ~~i~~~Dva~~~~~~~~~~---~~~~~~~~~~~~~~~  221 (287)
                      -+...+|+|++++.++..+   --+|+.+.+.+|..+
T Consensus       227 R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         227 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            2556899999999988532   247899999888654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.26  E-value=6.3e-12  Score=100.58  Aligned_cols=197  Identities=16%  Similarity=0.142  Sum_probs=123.5

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh---cCCcEEEEecCCChHHHHhhhccC-----C
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAK-----G   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~-----~   72 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+..     .++.+.   ..++..+.+|+++++++.++++..     .
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_          10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-----QQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            899999999999999999999999999876532111     111111   235788999999998887776532     6


Q ss_pred             ccEEEEccCCCcc----------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           73 FDVVYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        73 ~d~vi~~a~~~~~----------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      +|++||++|....                      +    .+.++..+.  +..+++++||......           ..
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~-----------~~  153 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA-----------HS  153 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC-----------CT
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc-----------CC
Confidence            8999999985311                      1    122222232  4456777776543111           11


Q ss_pred             CCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCC-----CchhHHHHHHHHcC-CCcccCCCCCceeeee
Q 023078          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAG-RPIPIPGSGIQVTQLG  190 (287)
Q Consensus       125 p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i  190 (287)
                      ....| .+|...+.+.+       .+|+++..+.||.+-.|...     ..........+... ..+++       .-+.
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-------gR~g  226 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-------GHCG  226 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCB
T ss_pred             CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-------CCCc
Confidence            12346 88998887653       46899999999998665210     00011111111111 11111       1245


Q ss_pred             eHHHHHHHHHHHhcCC---cCCCceEEeeCCCc
Q 023078          191 HVKDLARAFVQVLGNE---KASRQVFNISGEKY  220 (287)
Q Consensus       191 ~~~Dva~~~~~~~~~~---~~~~~~~~~~~~~~  220 (287)
                      .++|+|++++.++..+   --+|+.+.+.+|..
T Consensus       227 ~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         227 KPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            6899999999988532   24789999988864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.4e-11  Score=97.57  Aligned_cols=183  Identities=16%  Similarity=0.153  Sum_probs=113.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhccC-----Cc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~-----~~   73 (287)
                      |||++-||.++++.|+++|++|++.+|+..+..+..     .++...  ..++.++.+|+++++++.++++..     ++
T Consensus        16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999876532211     111111  236788899999998877766532     69


Q ss_pred             cEEEEccCCCcc--------------------c----hHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREAD--------------------E----VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~--------------------~----~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+|+....                    +    ++.++..++    ...++|++||...+..         .+...
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------~p~~~  161 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  161 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------CCCcc
Confidence            999999987422                    1    222333322    3468999998764210         01111


Q ss_pred             Cccc-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHH
Q 023078          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (287)
                      ...| .+|...+.+.+         ..++++..+.||.+-.+... ..............         ....+...+|+
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~-~~~~~~~~~~~~~~---------~~~r~~~pedv  231 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-KLHDKDPEKAAATY---------EQMKCLKPEDV  231 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH-HHTTTCHHHHHHHH---------C---CBCHHHH
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh-hcChhhHHHHHhcC---------CCCCCcCHHHH
Confidence            2236 88888776642         35789999999876443100 00000001111100         11235679999


Q ss_pred             HHHHHHHhcCCc
Q 023078          196 ARAFVQVLGNEK  207 (287)
Q Consensus       196 a~~~~~~~~~~~  207 (287)
                      |++++.++..+.
T Consensus       232 A~~v~fL~s~~a  243 (257)
T d1xg5a_         232 AEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhCChh
Confidence            999999987653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.23  E-value=9.1e-12  Score=99.74  Aligned_cols=190  Identities=19%  Similarity=0.192  Sum_probs=121.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++-||+++++.|+++|++|++.+|+.++..+.        ..+...++..+.+|+++.+++.++++.     -.+|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~--------~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_          11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL--------ETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            79999999999999999999999999987653221        112245788899999998877777653     27999


Q ss_pred             EEEccCCCcc-------------------------c----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           76 VYDINGREAD-------------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        76 vi~~a~~~~~-------------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      +||+||....                         +    ++.++..++ ...++|++||...+-            ..|
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~------------~~~  150 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY------------PNG  150 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS------------TTS
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc------------CCC
Confidence            9999985211                         1    122233333 335788888765321            112


Q ss_pred             C-ccc-cchHHHHHHHH------hcCCcEEEEccCceecCCCCCch---------hHHHHHHHHcCCCcccCCCCCceee
Q 023078          126 K-SRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQ  188 (287)
Q Consensus       126 ~-~~~-~~k~~~E~~~~------~~~~~~~ilr~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
                      . ..| .+|...+.+.+      ..++++..+.||.+-.+......         ...+...+.+..++.         -
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R  221 (276)
T d1bdba_         151 GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG---------R  221 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS---------S
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC---------C
Confidence            2 236 88998887653      13599999999988655211110         001122222222221         1


Q ss_pred             eeeHHHHHHHHHHHhcC---CcCCCceEEeeCCC
Q 023078          189 LGHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (287)
Q Consensus       189 ~i~~~Dva~~~~~~~~~---~~~~~~~~~~~~~~  219 (287)
                      +..++|+|++++.++..   .--+|+.+++.+|-
T Consensus       222 ~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         222 MPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             CCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             CcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            34578999999888742   23478999998874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.20  E-value=8.8e-11  Score=92.65  Aligned_cols=194  Identities=16%  Similarity=0.100  Sum_probs=120.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC-ChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~-----~~~d   74 (287)
                      |||++-||..++++|+++|++|+++.|+.+.... +.   .........++.++.+|++ +.+++.++++.     -++|
T Consensus        11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1          11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LA---ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HH---HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HH---HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987665211 10   0011111346888999997 55455554432     2799


Q ss_pred             EEEEccCCCcc------------c----hHHHHHhCC-----CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cch
Q 023078           75 VVYDINGREAD------------E----VEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (287)
Q Consensus        75 ~vi~~a~~~~~------------~----~~~l~~a~~-----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k  132 (287)
                      ++|++||....            +    ++.++..+.     ...++|++||...+.+           ......| .+|
T Consensus        87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~asK  155 (254)
T d1sbya1          87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------IHQVPVYSASK  155 (254)
T ss_dssp             EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTSHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-----------CCCCHHHHHHH
Confidence            99999997432            1    222333332     2357999998765211           1112236 889


Q ss_pred             HHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcc-cCCCCCceeeeeeHHHHHHHHHHHhc
Q 023078          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLG  204 (287)
Q Consensus       133 ~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~  204 (287)
                      .....+.+       ..++++..+.||.+..+.         .+......... ..............+++|++++.+++
T Consensus       156 aal~~~t~~la~el~~~gIrVn~I~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~  226 (254)
T d1sbya1         156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPL---------VHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH---------HHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc---------ccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh
Confidence            88776642       468999999999987651         00000000000 00000011234578999999998887


Q ss_pred             CCcCCCceEEeeCCC
Q 023078          205 NEKASRQVFNISGEK  219 (287)
Q Consensus       205 ~~~~~~~~~~~~~~~  219 (287)
                      ... .|+++.+.+|.
T Consensus       227 ~~~-tG~vi~vdgG~  240 (254)
T d1sbya1         227 ANK-NGAIWKLDLGT  240 (254)
T ss_dssp             HCC-TTCEEEEETTE
T ss_pred             CCC-CCCEEEECCCE
Confidence            654 78899988874

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=3.1e-10  Score=89.84  Aligned_cols=194  Identities=14%  Similarity=0.123  Sum_probs=123.9

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|  -||+++++.|+++|++|++.+|+++... ..     .+..........+..|..+..+....+..     ...
T Consensus        11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_          11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence            79998  7899999999999999999999854321 11     12233345667788888887655554432     268


Q ss_pred             cEEEEccCCCccc-------------------------hHHHHHhCC----CCCcEEEEeeeeEeecCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREADE-------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (287)
Q Consensus        74 d~vi~~a~~~~~~-------------------------~~~l~~a~~----~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~  124 (287)
                      |.+||+++.....                         ...+.+++.    +...++++||....            ...
T Consensus        85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~------------~~~  152 (258)
T d1qsga_          85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------RAI  152 (258)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------SBC
T ss_pred             ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc------------cCC
Confidence            9999998763211                         122222222    33467888886531            111


Q ss_pred             C-Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch-hHHHHHHHHcCCCcccCCCCCceeeeeeHHH
Q 023078          125 P-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (287)
Q Consensus       125 p-~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (287)
                      | ...| .+|.+.+.+.+       .+++++..++||.+..+...... .........+..++   +      -+..++|
T Consensus       153 ~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---~------R~~~pee  223 (258)
T d1qsga_         153 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---R------RTVTIED  223 (258)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---S------SCCCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC---C------CCcCHHH
Confidence            2 2336 89999888764       36899999999999876432211 12223333332222   1      2456899


Q ss_pred             HHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       195 va~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                      +|+++..++....  -+|+++.+.+|..+
T Consensus       224 ia~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         224 VGNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCchhcCccCceEEECcCHHH
Confidence            9999999986532  47889999888653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.16  E-value=7.1e-11  Score=95.51  Aligned_cols=206  Identities=13%  Similarity=0.090  Sum_probs=126.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC-chhhhhhcCCcEEEEecCCChHHHHhhhc----cC-Ccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK-GFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~-~~d   74 (287)
                      |||++-||+.+++.|+++|++|++.+|+.+.......... +....+.......+.+|+.+.++..+.++    .. ++|
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD   92 (302)
T d1gz6a_          13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   92 (302)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999887654211111100 11111222344556778887655544443    22 699


Q ss_pred             EEEEccCCCcc--------------------c----hHHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCcc
Q 023078           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~----~~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~  128 (287)
                      ++||+||....                    +    .+.++..++  +..++|++||...+-+..           ....
T Consensus        93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~-----------~~~~  161 (302)
T d1gz6a_          93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----------GQAN  161 (302)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHH
T ss_pred             EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC-----------CcHH
Confidence            99999997432                    1    222333343  567999999987532111           1224


Q ss_pred             c-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHH
Q 023078          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (287)
Q Consensus       129 ~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (287)
                      | .+|...+.+.+       .+|+++..+.||.+-.+.  ....+                  +....++..+|+|.+++
T Consensus       162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~--~~~~~------------------~~~~~~~~PedvA~~v~  221 (302)
T d1gz6a_         162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT--ETVMP------------------EDLVEALKPEYVAPLVL  221 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT--GGGSC------------------HHHHHHSCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch--hhcCc------------------HhhHhcCCHHHHHHHHH
Confidence            6 89998887653       468999999998652221  11110                  11112344689999999


Q ss_pred             HHhcCC-cCCCceEEeeCC-------------------CcccHHHHHHHHHHHhCCC
Q 023078          201 QVLGNE-KASRQVFNISGE-------------------KYVTFDGLARACAKAAGFP  237 (287)
Q Consensus       201 ~~~~~~-~~~~~~~~~~~~-------------------~~~s~~~i~~~i~~~~g~~  237 (287)
                      .++... .-+|+++.+.+|                   .+.|..++++.+.+....+
T Consensus       222 fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         222 WLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             HHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             HHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            887532 236777776544                   2346667777776666544

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=9.2e-11  Score=94.19  Aligned_cols=143  Identities=16%  Similarity=0.091  Sum_probs=94.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEec---CCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc---CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~d   74 (287)
                      |||++-||+++++.|+++|.+|+.+.+   +..... .+.+ ..........++..+.+|++|.+++.++++.   -.+|
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~-~l~~-~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id   85 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG-RLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD   85 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTH-HHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhH-HHHH-HHHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence            899999999999999999987655543   322211 0000 0011112245789999999999888887654   3699


Q ss_pred             EEEEccCCCcc--------------------ch----HHHHHhCC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCC-Cc
Q 023078           75 VVYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KS  127 (287)
Q Consensus        75 ~vi~~a~~~~~--------------------~~----~~l~~a~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p-~~  127 (287)
                      +++++++....                    +.    +.++..++  +..++|++||....-            ..| ..
T Consensus        86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~------------~~~~~~  153 (285)
T d1jtva_          86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM------------GLPFND  153 (285)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS------------CCTTCH
T ss_pred             hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC------------CCCCch
Confidence            99999987322                    12    22333343  667999999986421            112 23


Q ss_pred             cc-cchHHHHHHH-------HhcCCcEEEEccCceecC
Q 023078          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       128 ~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~  157 (287)
                      .| .+|...+.+.       ..+|+++..+.||.+-.+
T Consensus       154 ~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence            46 8999988765       346899999999988654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=2.6e-11  Score=96.25  Aligned_cols=190  Identities=15%  Similarity=0.099  Sum_probs=116.2

Q ss_pred             CCcccchHHHHHHHHHH---CCCeEEEEecCCccccccCCCCCchhhhhh--cCCcEEEEecCCChHHHHhhhcc-----
Q 023078            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~-----   70 (287)
                      |||++.||..+++.|.+   +|++|++++|+.++..+..     .++...  ..++..+.+|+++++++.++++.     
T Consensus        12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_          12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            89999999999999986   6999999999876532211     112111  24678899999999888777632     


Q ss_pred             ----CCccEEEEccCCCc-----------------------cc----hHHHHHhCC--C--CCcEEEEeeeeEeecCCCC
Q 023078           71 ----KGFDVVYDINGREA-----------------------DE----VEPILDALP--N--LEQFIYCSSAGVYLKSDLL  115 (287)
Q Consensus        71 ----~~~d~vi~~a~~~~-----------------------~~----~~~l~~a~~--~--~~~~i~~Ss~~~y~~~~~~  115 (287)
                          ...|++++++|...                       .+    ++.++..++  +  ..++|++||...+.+    
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~----  162 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC----
Confidence                25678999887521                       01    233344444  2  357999998764211    


Q ss_pred             CCCCCCCCCCCccc-cchHHHHHHHH-----hcCCcEEEEccCceecCCCCC----chhHHHHHHHHcCCCcccCCCCCc
Q 023078          116 PHCETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       116 ~~~e~~~~~p~~~~-~~k~~~E~~~~-----~~~~~~~ilr~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                             ......| .+|...+.+.+     ..++++..+.||.+-.+....    ...+.....+....+.        
T Consensus       163 -------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--------  227 (259)
T d1oaaa_         163 -------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD--------  227 (259)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT--------
T ss_pred             -------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC--------
Confidence                   1112346 88998887653     468999999999886552000    0000111111110000        


Q ss_pred             eeeeeeHHHHHHHHHHHhcCCc-CCCceEEe
Q 023078          186 VTQLGHVKDLARAFVQVLGNEK-ASRQVFNI  215 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~~-~~~~~~~~  215 (287)
                       --+..++|+|++++.++.... ..|+.+++
T Consensus       228 -~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         228 -GALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             -TCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             -CCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence             123568999999998886532 24555554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.07  E-value=1.3e-09  Score=85.20  Aligned_cols=183  Identities=16%  Similarity=0.165  Sum_probs=114.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhc----cCCccEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AKGFDVV   76 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~~~d~v   76 (287)
                      |||++.||+++++.|+++|++|++.+|+++.                 .+....++|+.+......+..    ....+.+
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            7999999999999999999999999998654                 345567889887654444432    2244555


Q ss_pred             EEccCCCcc------------------------c----hHHHHHh------CC--CCCcEEEEeeeeEeecCCCCCCCCC
Q 023078           77 YDINGREAD------------------------E----VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (287)
Q Consensus        77 i~~a~~~~~------------------------~----~~~l~~a------~~--~~~~~i~~Ss~~~y~~~~~~~~~e~  120 (287)
                      ++.++....                        .    .+.++..      +.  +..++|++||...+.+..       
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-------  142 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  142 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence            544433110                        0    1112222      11  345899999976532111       


Q ss_pred             CCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeH
Q 023078          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (287)
Q Consensus       121 ~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (287)
                          ....| .+|...+.+.+       .+|+++..+.||.+-.+..... ............++  .+      -+..+
T Consensus       143 ----~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~--~~------R~g~p  209 (241)
T d1uaya_         143 ----GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PEKAKASLAAQVPF--PP------RLGRP  209 (241)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CHHHHHHHHTTCCS--SC------SCCCH
T ss_pred             ----CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh-hhhHHHHHHhcCCC--CC------CCcCH
Confidence                12246 89999887753       4689999999998865421111 11222233332221  11      13468


Q ss_pred             HHHHHHHHHHhcCCcCCCceEEeeCCCc
Q 023078          193 KDLARAFVQVLGNEKASRQVFNISGEKY  220 (287)
Q Consensus       193 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~  220 (287)
                      +|+|+++..++...--+|+.+.+.+|-.
T Consensus       210 edvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         210 EEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence            9999999999886555789999988753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.04  E-value=3e-09  Score=84.34  Aligned_cols=194  Identities=15%  Similarity=0.156  Sum_probs=115.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhh-hhcCCcEEEEecCCC----hHHHHhhhc----c-
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLS----A-   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~----~-   70 (287)
                      |||++-||+.+++.|+++|++|++.+|+.++..+.+.    .++. ...........|..+    .+.+.++++    . 
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH----HHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999998765332221    1111 112455556655543    233333222    1 


Q ss_pred             CCccEEEEccCCCccc-----------------------------------hHHHHHhCC-------CCCcEEEEeeeeE
Q 023078           71 KGFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGV  108 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~-----------------------------------~~~l~~a~~-------~~~~~i~~Ss~~~  108 (287)
                      -.+|++||++|.....                                   .......+.       ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            2699999999863210                                   000111111       1123334443322


Q ss_pred             eecCCCCCCCCCCCCCCC-ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCccc
Q 023078          109 YLKSDLLPHCETDTVDPK-SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (287)
Q Consensus       109 y~~~~~~~~~e~~~~~p~-~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (287)
                      .            ...|. ..| .+|...+.+.+       .+|+++..+.||.+..+...   .......+.+..++  
T Consensus       163 ~------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~~~~~~~~~~~~pl--  225 (266)
T d1mxha_         163 D------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---PQETQEEYRRKVPL--  225 (266)
T ss_dssp             G------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---CHHHHHHHHTTCTT--
T ss_pred             c------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---CHHHHHHHHhcCCC--
Confidence            1            11122 235 78998887653       46899999999988765322   22334444444332  


Q ss_pred             CCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCcc
Q 023078          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (287)
Q Consensus       180 ~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (287)
                       +     +-+...+|+|++++.++....  -+|+.+.+.+|-.+
T Consensus       226 -~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         226 -G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             -T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence             1     123568999999999997543  37889999887644

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.03  E-value=1.3e-09  Score=84.94  Aligned_cols=170  Identities=13%  Similarity=0.083  Sum_probs=107.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHH-------HhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-------KSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~~~~~~~   73 (287)
                      |||+|.||+++++.|+++|++|.++++++....               .....+..+..+.++.       .+.+...++
T Consensus         8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999998765411               1222334444433322       223333368


Q ss_pred             cEEEEccCCCcc---------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-c
Q 023078           74 DVVYDINGREAD---------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~  127 (287)
                      |++||+||....                     +    .+.++..+++..++|++||.....            ..|. .
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------~~~~~~  140 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD------------GTPGMI  140 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------CCTTBH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC------------CccCCc
Confidence            999999985211                     0    122233334446899999976421            1122 2


Q ss_pred             cc-cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          128 RH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      .| .+|...+.+.+         ..++++..+.||.+..|         +.+.....         ...-.|+..+++|+
T Consensus       141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~---------~~~~~~~~pe~va~  202 (236)
T d1dhra_         141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPE---------ADFSSWTPLEFLVE  202 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTT---------SCGGGSEEHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC---------cchhhCcc---------chhhcCCCHHHHHH
Confidence            36 99999888763         24799999999988655         11111111         11224678999999


Q ss_pred             HHHHHhcCCc--CCCceEEe
Q 023078          198 AFVQVLGNEK--ASRQVFNI  215 (287)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~~  215 (287)
                      .+..++....  ..|..+.+
T Consensus       203 ~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         203 TFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHHhCCCccCCCCCeEEE
Confidence            9999887533  35666655

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.3e-09  Score=83.27  Aligned_cols=187  Identities=16%  Similarity=0.188  Sum_probs=113.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      |||++.||.++++.|+++|++|++++|+.+...+.        ..+..........|..+.+.+.+....     ...|.
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1          11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ--------AKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH--------HHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHHhCCCcccccccccccccccccccccccccccccc
Confidence            79999999999999999999999999987663221        122245677788888886555443321     26788


Q ss_pred             EEEccCCCcc--------------------------chHHHHHhC----C--------CCCcEEEEeeeeEeecCCCCCC
Q 023078           76 VYDINGREAD--------------------------EVEPILDAL----P--------NLEQFIYCSSAGVYLKSDLLPH  117 (287)
Q Consensus        76 vi~~a~~~~~--------------------------~~~~l~~a~----~--------~~~~~i~~Ss~~~y~~~~~~~~  117 (287)
                      .++.++.+..                          +...+.+++    .        +..++|++||...+.+.     
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~-----  157 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  157 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC-----
Confidence            8877654211                          112222221    1        23479999998753211     


Q ss_pred             CCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeee
Q 023078          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       118 ~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                            .....| .+|...+.+.+       .+|+++..+.||.+..+.. ..+.......+.+..++  .+      -+
T Consensus       158 ------~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl--~~------R~  222 (248)
T d2o23a1         158 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL-TSLPEKVCNFLASQVPF--PS------RL  222 (248)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSS--SC------SC
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh-hcCCHHHHHHHHhcCCC--CC------CC
Confidence                  112346 99999887763       4689999999998866531 11111111122222111  01      14


Q ss_pred             eeHHHHHHHHHHHhcCCcCCCceEEe
Q 023078          190 GHVKDLARAFVQVLGNEKASRQVFNI  215 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~~~~~~~~~~  215 (287)
                      ..++|+|+++..+++..--+|++.+|
T Consensus       223 g~peevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         223 GDPAEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             cCHHHHHHHHHHHHhCCCCCceEeEC
Confidence            57899999999988754345665553

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.02  E-value=8.3e-10  Score=86.04  Aligned_cols=172  Identities=15%  Similarity=0.143  Sum_probs=105.6

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChH-------HHHhhhccCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-------FVKSSLSAKGF   73 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~~~~~~~   73 (287)
                      |||+|-||+++++.|+++|++|++++|++....               .....+.+|..+.+       .+...++.-.+
T Consensus         8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            799999999999999999999999999865421               11223344554322       22333332368


Q ss_pred             cEEEEccCCCcc---------------------c----hHHHHHhCCCCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-c
Q 023078           74 DVVYDINGREAD---------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-S  127 (287)
Q Consensus        74 d~vi~~a~~~~~---------------------~----~~~l~~a~~~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~  127 (287)
                      |++||+||....                     +    .+.++..+++..++|++||...+.            ..|. .
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~------------~~~~~~  140 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------PTPSMI  140 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------CCTTBH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC------------Cccccc
Confidence            999999985211                     1    112223333346899999876421            1122 3


Q ss_pred             cc-cchHHHHHHHHh---------cCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHH
Q 023078          128 RH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (287)
Q Consensus       128 ~~-~~k~~~E~~~~~---------~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (287)
                      .| .+|.+.+.+.+.         .++.+..+.||.+-.+         +.+.....         .....++..+|+++
T Consensus       141 ~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~---------~~~~~~~~~~~va~  202 (235)
T d1ooea_         141 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPN---------ADHSSWTPLSFISE  202 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTT---------CCGGGCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcC---------CccccCCCHHHHHH
Confidence            46 999998887632         3567888899876433         12222111         11234678999999


Q ss_pred             HHHHHhcCC---cCCCceEEeeC
Q 023078          198 AFVQVLGNE---KASRQVFNISG  217 (287)
Q Consensus       198 ~~~~~~~~~---~~~~~~~~~~~  217 (287)
                      .++..+..+   ...|..+.+..
T Consensus       203 ~~~~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         203 HLLKWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHHhcCccccCCCceEEEEEe
Confidence            987666442   23566677643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.01  E-value=2.8e-09  Score=85.40  Aligned_cols=196  Identities=11%  Similarity=0.040  Sum_probs=115.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCC-----------------cEEEEecCCChH
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSK-----------------ILHLKGDRKDYD   62 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~~~~d~~~~~   62 (287)
                      |||++-||+++++.|+++|++|++.+|+.....+.+.    .++... ...                 +....+|+++.+
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS----ATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH----HHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            8999999999999999999999998887654222111    011100 112                 233456677777


Q ss_pred             HHHhhhcc-----CCccEEEEccCCCccc----------------------------------hHHHHHh----------
Q 023078           63 FVKSSLSA-----KGFDVVYDINGREADE----------------------------------VEPILDA----------   93 (287)
Q Consensus        63 ~~~~~~~~-----~~~d~vi~~a~~~~~~----------------------------------~~~l~~a----------   93 (287)
                      ++.++++.     -++|++||++|.....                                  ...+.++          
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            77766542     2799999999863210                                  0001111          


Q ss_pred             CC--CCCcEEEEeeeeEeecCCCCCCCCCCCCCCCccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCch
Q 023078           94 LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV  163 (287)
Q Consensus        94 ~~--~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~  163 (287)
                      .+  +..+++.+++....           .+......| .+|...+.+.+       .+|+++..+.||..-..   ...
T Consensus       164 ~~~~~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~---~~~  229 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV---DDM  229 (284)
T ss_dssp             GGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG---GGS
T ss_pred             HhcCCCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc---ccC
Confidence            11  22345555554321           111112236 88998887753       46899999999863222   122


Q ss_pred             hHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHHHHHhcCCc--CCCceEEeeCCCccc
Q 023078          164 EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (287)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~~~~~~~~~~s  222 (287)
                      .....+...+..++  .+      -+...+|+|+++..++....  -+|+.+.+.+|..++
T Consensus       230 ~~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         230 PPAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             CHHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            23344444443321  11      23568999999999986533  378999999887654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.99  E-value=3.3e-09  Score=83.31  Aligned_cols=183  Identities=14%  Similarity=0.075  Sum_probs=106.7

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-------C
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~   71 (287)
                      |||++-||.++++.|+++|+  .|++.+|+.++..+...        ....++.++.+|+++.+++.++++.       .
T Consensus         9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~--------~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS--------IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT--------CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH--------hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999985  78888998766322111        1145789999999998777666542       2


Q ss_pred             CccEEEEccCCCcc---------------------chHHHHHhC----C-------------CCCcEEEEeeeeEeecCC
Q 023078           72 GFDVVYDINGREAD---------------------EVEPILDAL----P-------------NLEQFIYCSSAGVYLKSD  113 (287)
Q Consensus        72 ~~d~vi~~a~~~~~---------------------~~~~l~~a~----~-------------~~~~~i~~Ss~~~y~~~~  113 (287)
                      .+|++||+||....                     +...+.+++    +             ...+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            48999999986311                     122222221    1             123456666543321110


Q ss_pred             CCCCCCCCCCCCCccc-cchHHHHHHH-------HhcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCc
Q 023078          114 LLPHCETDTVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (287)
Q Consensus       114 ~~~~~e~~~~~p~~~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (287)
                          .......+...| .+|.+...+.       +..++++..+.||.+--+     +    .   ..            
T Consensus       161 ----~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~-----m----~---~~------------  212 (250)
T d1yo6a1         161 ----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN-----L----G---GK------------  212 (250)
T ss_dssp             ----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             ----cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC-----C----C---CC------------
Confidence                001111222236 8999877664       356899999999977433     1    0   00            


Q ss_pred             eeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       186 ~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                       ...+..++.+..++..+...  ...|..|+ .++.+.
T Consensus       213 -~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~  248 (250)
T d1yo6a1         213 -NAALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPY  248 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEEC
T ss_pred             -CCCCCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeC
Confidence             11245688888888888653  22455443 445544

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.98  E-value=2e-09  Score=84.57  Aligned_cols=142  Identities=18%  Similarity=0.214  Sum_probs=95.3

Q ss_pred             CCcccchHHHHHHHHHH---CCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-------
Q 023078            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------   70 (287)
                      |||++-||..+++.|++   +|++|++.+|++++..+ +     .++.....++.++.+|++|++++.++++.       
T Consensus         8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H-----HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            89999999999999974   68999999999776322 1     12333356899999999998777766542       


Q ss_pred             CCccEEEEccCCCcc---------------------c----hHHHHHhCC-------------CCCcEEEEeeeeEeecC
Q 023078           71 KGFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKS  112 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~---------------------~----~~~l~~a~~-------------~~~~~i~~Ss~~~y~~~  112 (287)
                      .++|++||+||....                     +    ++.++..++             +..++|.+||....  .
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence            369999999986311                     1    111111111             34678999886421  0


Q ss_pred             CCCCCCCCCCCCCCc-cc-cchHHHHHHH-------HhcCCcEEEEccCceecC
Q 023078          113 DLLPHCETDTVDPKS-RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (287)
Q Consensus       113 ~~~~~~e~~~~~p~~-~~-~~k~~~E~~~-------~~~~~~~~ilr~~~v~g~  157 (287)
                      .       ....|.. .| .+|.+...+.       ...++++..+.||.+-.+
T Consensus       160 ~-------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 Q-------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             T-------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             C-------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            0       1112222 36 8999877664       356899999999987554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.97  E-value=3.3e-09  Score=84.53  Aligned_cols=194  Identities=12%  Similarity=0.076  Sum_probs=119.2

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCc
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~   73 (287)
                      |||+|  -||.++++.|+++|++|++.+|+++.. +.     ..++.+......+...|+++.+.+.++++.     -.+
T Consensus        11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~-~~-----~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1          11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KR-----VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH-HH-----HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HH-----HHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            68887  699999999999999999999985431 11     122333345667889999988776666532     279


Q ss_pred             cEEEEccCCCccc------------------------hHHHHHhC-C--CCCc-EEEEeeeeEeecCCCCCCCCCCCCCC
Q 023078           74 DVVYDINGREADE------------------------VEPILDAL-P--NLEQ-FIYCSSAGVYLKSDLLPHCETDTVDP  125 (287)
Q Consensus        74 d~vi~~a~~~~~~------------------------~~~l~~a~-~--~~~~-~i~~Ss~~~y~~~~~~~~~e~~~~~p  125 (287)
                      |++||+++.....                        .......+ .  +... ++.+|+.+...           ....
T Consensus        85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-----------~~~~  153 (274)
T d2pd4a1          85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------YMAH  153 (274)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------BCTT
T ss_pred             CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-----------cccc
Confidence            9999999863220                        11111111 1  2223 44444433211           1112


Q ss_pred             Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchh-HHHHHHHHcCCCcccCCCCCceeeeeeHHHHH
Q 023078          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (287)
Q Consensus       126 ~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (287)
                      ...| .+|...+.+.+       .+|+++..+.||.+..+....... ...........+.         .-+...+|+|
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedIA  224 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  224 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCHHHHH
Confidence            2235 78888887653       468999999999887764221111 1222222222221         1345689999


Q ss_pred             HHHHHHhcCCc--CCCceEEeeCCCc
Q 023078          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (287)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~~~~~~~  220 (287)
                      +++..++....  -+|+.+.+.+|..
T Consensus       225 ~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         225 NAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCceEEECCChh
Confidence            99999987533  3788999998864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=4.4e-10  Score=89.81  Aligned_cols=78  Identities=21%  Similarity=0.212  Sum_probs=61.0

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d   74 (287)
                      |||++-||..+++.|+++ |++|++.+|+.++..+..     .++.....++.++.+|++|.++++++++.     -.+|
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            899999999999999986 899999999987632221     12233346789999999998887766543     2799


Q ss_pred             EEEEccCCC
Q 023078           75 VVYDINGRE   83 (287)
Q Consensus        75 ~vi~~a~~~   83 (287)
                      ++||+||..
T Consensus        84 iLVnNAGi~   92 (275)
T d1wmaa1          84 VLVNNAGIA   92 (275)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEcCCcC
Confidence            999999974

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.86  E-value=6.8e-09  Score=82.35  Aligned_cols=194  Identities=16%  Similarity=0.107  Sum_probs=113.8

Q ss_pred             CCccc--chHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc--------
Q 023078            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (287)
Q Consensus         1 tGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------   70 (287)
                      |||+|  .||.++++.|+++|++|++.+|+..+..+.+.       .....+...+++|+.++++..++++.        
T Consensus        12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~-------~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1          12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH-------HHcCCceeeEeeecccccccccccchhhhccccC
Confidence            78665  59999999999999999999998765322111       11135677889999987655554332        


Q ss_pred             CCccEEEEccCCCccc-------------------------hHHHHHhCC---CCCcEEEEeeeeEeecCCCCCCCCCCC
Q 023078           71 KGFDVVYDINGREADE-------------------------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~-------------------------~~~l~~a~~---~~~~~i~~Ss~~~y~~~~~~~~~e~~~  122 (287)
                      -..|+++|+++.....                         ......+..   +....+.++|....            .
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~------------~  152 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS------------R  152 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS------------S
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc------------c
Confidence            1579999999853110                         011111111   22233444433221            1


Q ss_pred             CCCC-ccc-cchHHHHHHHH-------hcCCcEEEEccCceecCC-------CCCch----hHHHHHHHHcCCCcccCCC
Q 023078          123 VDPK-SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-------NYNPV----EEWFFHRLKAGRPIPIPGS  182 (287)
Q Consensus       123 ~~p~-~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~-------~~~~~----~~~~~~~~~~~~~~~~~~~  182 (287)
                      ..|. ..| .+|...+.+.+       ..++++..+.||.+-.+.       .....    ...+.....+..++.    
T Consensus       153 ~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~----  228 (268)
T d2h7ma1         153 AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG----  228 (268)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC----
T ss_pred             cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC----
Confidence            1122 235 88988887753       468999999999875431       00100    111122222222211    


Q ss_pred             CCceeeeeeHHHHHHHHHHHhcCC--cCCCceEEeeCCCcc
Q 023078          183 GIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (287)
Q Consensus       183 ~~~~~~~i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~~~~  221 (287)
                          +-+..++|+|+++..++...  --+|+++.+.+|...
T Consensus       229 ----rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         229 ----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             ----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             ----CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence                12345799999999998542  237889999888654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.1e-09  Score=83.72  Aligned_cols=173  Identities=15%  Similarity=0.111  Sum_probs=108.9

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhcc-----CCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~   75 (287)
                      ||||+.||+++++.|+++|++|++++|+.++..+...    .........+..+.+|..+.+........     -..|+
T Consensus        20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            8999999999999999999999999998766322211    01112234567788899887655554432     26899


Q ss_pred             EEEccCCCcc--------------------c----hHHHHHhCC-CCCcEEEEeeeeEeecCCCCCCCCCCCCCCC-ccc
Q 023078           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-SRH  129 (287)
Q Consensus        76 vi~~a~~~~~--------------------~----~~~l~~a~~-~~~~~i~~Ss~~~y~~~~~~~~~e~~~~~p~-~~~  129 (287)
                      ++++++....                    +    ++.++..++ +..++|++||...+            ...|. ..|
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~------------~~~p~~~~Y  163 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK------------VAYPMVAAY  163 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT------------SCCTTCHHH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc------------CCCCCchHH
Confidence            9998876321                    1    222233333 45689999987642            11222 246


Q ss_pred             -cchHHHHHHHH---------hcCCcEEEEccCceecCCCCCchhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       130 -~~k~~~E~~~~---------~~~~~~~ilr~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                       .+|...+.+.+         ..++++..+.||.+-.+         +......+.         ........+++|+.+
T Consensus       164 ~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~~e~~a~~i  225 (269)
T d1xu9a_         164 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGI---------VHMQAAPKEECALEI  225 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGG---------GGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCC---------ccccCCCHHHHHHHH
Confidence             99998887642         24688889999877433         112211111         112345678999988


Q ss_pred             HHHhcCCc
Q 023078          200 VQVLGNEK  207 (287)
Q Consensus       200 ~~~~~~~~  207 (287)
                      +..+...+
T Consensus       226 ~~~~~~~~  233 (269)
T d1xu9a_         226 IKGGALRQ  233 (269)
T ss_dssp             HHHHHTTC
T ss_pred             HHHhhcCC
Confidence            87766543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.55  E-value=3.2e-07  Score=74.71  Aligned_cols=30  Identities=17%  Similarity=0.080  Sum_probs=25.8

Q ss_pred             CC--cccchHHHHHHHHHHCCCeEEEEecCCc
Q 023078            1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         1 tG--atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (287)
                      ||  ++.-||+.+++.|.++|.+|++..++..
T Consensus         8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~   39 (329)
T d1uh5a_           8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV   39 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred             eCCCCCChHHHHHHHHHHHcCCEEEEEeCchh
Confidence            67  5568999999999999999999887643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.52  E-value=3.3e-08  Score=74.13  Aligned_cols=75  Identities=19%  Similarity=0.190  Sum_probs=60.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |||+|.||+.+++.|+++|.+|++++|+.++..+..     ..+. ...++....+|+.+.+++.+++.  ++|++||++
T Consensus        29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A  100 (191)
T d1luaa1          29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVN-KRFKVNVTAAETADDASRAEAVK--GAHFVFTAG  100 (191)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHH-HHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHH-----HHHH-hccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence            799999999999999999999999999976632221     1111 12356678899999999999998  899999999


Q ss_pred             CCC
Q 023078           81 GRE   83 (287)
Q Consensus        81 ~~~   83 (287)
                      +..
T Consensus       101 g~g  103 (191)
T d1luaa1         101 AIG  103 (191)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.46  E-value=1.2e-06  Score=70.12  Aligned_cols=83  Identities=7%  Similarity=-0.004  Sum_probs=54.3

Q ss_pred             ccchHHHHHHH--------HhcCCcEEEEccCceecCCCCC-chhHHHHHHHHcCCCcccCCCCCceeeeeeHHHHHHHH
Q 023078          129 HKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (287)
Q Consensus       129 ~~~k~~~E~~~--------~~~~~~~~ilr~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (287)
                      +.+|...+.+.        ..+++++..+.||.+..+.... .....+.+...+..++   +      -+...+|+|.++
T Consensus       193 ~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl---g------R~~~peevA~~v  263 (297)
T d1d7oa_         193 SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI---Q------KTLTADEVGNAA  263 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS---C------CCBCHHHHHHHH
T ss_pred             ecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCC---C------CCCCHHHHHHHH
Confidence            37777766554        2468999999999998775322 1223344444443332   1      245689999999


Q ss_pred             HHHhcCC--cCCCceEEeeCCCc
Q 023078          200 VQVLGNE--KASRQVFNISGEKY  220 (287)
Q Consensus       200 ~~~~~~~--~~~~~~~~~~~~~~  220 (287)
                      +.++...  --+|+.+.+.+|..
T Consensus       264 ~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         264 AFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhcCCcCceEEECcCHh
Confidence            9998653  24788999988753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.44  E-value=2e-06  Score=67.23  Aligned_cols=188  Identities=17%  Similarity=0.141  Sum_probs=97.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh----hcc--CCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS----LSA--KGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~--~~~d   74 (287)
                      |||++.||+++++.|+++|++|++++|++.+.                      ..|+.+.+.....    ...  ...|
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999976542                      2244443222221    111  2589


Q ss_pred             EEEEccCCCccc-------------hHHHHH----hCC--CCCcEEEEeeeeEeec-CCCCCCC---------------C
Q 023078           75 VVYDINGREADE-------------VEPILD----ALP--NLEQFIYCSSAGVYLK-SDLLPHC---------------E  119 (287)
Q Consensus        75 ~vi~~a~~~~~~-------------~~~l~~----a~~--~~~~~i~~Ss~~~y~~-~~~~~~~---------------e  119 (287)
                      .++++++.....             ...+.+    ...  .......+++...... ....+..               .
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            999999864321             111111    111  2223333333221100 0000000               0


Q ss_pred             CCCCCC-Cccc-cchHHHHHHHH-------hcCCcEEEEccCceecCCCCCchhH-HHHHHHHcCCCcccCCCCCceeee
Q 023078          120 TDTVDP-KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQL  189 (287)
Q Consensus       120 ~~~~~p-~~~~-~~k~~~E~~~~-------~~~~~~~ilr~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  189 (287)
                      .....+ ...| .+|...+.+.+       .+|+++..+.||.+-.+.....+.. .....+.+.. .     +  .--+
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~-----P--lgR~  216 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-P-----P--MGRR  216 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-C-----S--TTSC
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-C-----C--CCCC
Confidence            000111 1126 88998887753       4689999999998866531111100 0111111110 0     0  0124


Q ss_pred             eeHHHHHHHHHHHhcCC--cCCCceEEeeCC
Q 023078          190 GHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (287)
Q Consensus       190 i~~~Dva~~~~~~~~~~--~~~~~~~~~~~~  218 (287)
                      ...+|+|+++..++...  --+|+.+.+.+|
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            56899999999998643  247889999877

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.73  E-value=3.2e-05  Score=53.73  Aligned_cols=70  Identities=16%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhh-hccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~d~vi~~a~   81 (287)
                      |.|.+|+++++.|.++|++|++++.+++.... +.          ..+...+.+|.++++.+.++ ++  ++|.||-..+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~-~~----------~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNA-YA----------SYATHAVIANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHH-TT----------TTCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHH-HH----------HhCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence            45999999999999999999999998877433 22          24667888999999988877 55  7898886666


Q ss_pred             CCcc
Q 023078           82 READ   85 (287)
Q Consensus        82 ~~~~   85 (287)
                      .+..
T Consensus        74 ~~~~   77 (134)
T d2hmva1          74 ANIQ   77 (134)
T ss_dssp             SCHH
T ss_pred             chHH
Confidence            5433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.64  E-value=2.9e-05  Score=53.86  Aligned_cols=69  Identities=19%  Similarity=0.312  Sum_probs=53.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|.++|++|++++++++.... +        .+ ..+..++.||.++++.+.++-- .++|+++-+...
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~--------~~-~~~~~vi~Gd~~~~~~l~~~~i-~~a~~vv~~t~~   75 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKK-A--------SA-EIDALVINGDCTKIKTLEDAGI-EDADMYIAVTGK   75 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H--------HH-HCSSEEEESCTTSHHHHHHTTT-TTCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhhh-h--------hh-hhhhhhccCcccchhhhhhcCh-hhhhhhcccCCc
Confidence            45999999999999999999999998776321 1        11 1367889999999999888732 278998876554

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.20  E-value=0.00025  Score=51.85  Aligned_cols=97  Identities=13%  Similarity=0.229  Sum_probs=63.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.....|.+|+++++++++.. .        ..+......+..-|-...+.+.+.....++|+|+++.
T Consensus        36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~-~--------~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA-Y--------LKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-H--------HHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH-H--------HHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence            599999999999999999999999999876521 1        1111222222223333345555666666899999998


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEeeeeE
Q 023078           81 GREADEVEPILDALPNLEQFIYCSSAGV  108 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss~~~  108 (287)
                      |.  ......++.++...+++.++....
T Consensus       107 G~--~~~~~~~~~l~~~G~~v~~G~~~~  132 (182)
T d1v3va2         107 GG--EFLNTVLSQMKDFGKIAICGAISV  132 (182)
T ss_dssp             CH--HHHHHHGGGEEEEEEEEECCCGGG
T ss_pred             Cc--hhhhhhhhhccCCCeEEeecceee
Confidence            73  345556666664456766554443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.16  E-value=0.00036  Score=50.54  Aligned_cols=68  Identities=16%  Similarity=0.138  Sum_probs=49.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|+++++.|.++|++|++++|+..+......         ..........+..+.......+.  ..|.++.+..
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~---------~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~   76 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA---------GVQHSTPISLDVNDDAALDAEVA--KHDLVISLIP   76 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT---------TCTTEEEEECCTTCHHHHHHHHT--TSSEEEECSC
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh---------cccccccccccccchhhhHhhhh--ccceeEeecc
Confidence            45999999999999999999999999887432211         12344445556666777777777  7788876554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00082  Score=44.52  Aligned_cols=63  Identities=13%  Similarity=0.008  Sum_probs=50.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|+-++....+.|++|++++.++.....++             .-.++.+|+.|.+.+.++....++|+|..
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            6899999999999999999999999877643332             23567899999999998876447898864

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.83  E-value=0.002  Score=45.20  Aligned_cols=85  Identities=12%  Similarity=0.213  Sum_probs=49.4

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccC-CccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAK-GFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~d~vi~   78 (287)
                      +||.|.+|+.+++.|.++||+|.+.+|+.....+....         .....+........ +.+.+..... .=.++++
T Consensus        15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA---------NADVVIVSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT---------TCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh---------hccccccccchhhheeeeecccccccCCceEEE
Confidence            37899999999999999999999999987663322110         12233332333221 2222222211 2347778


Q ss_pred             ccCCCccchHHHHHhC
Q 023078           79 INGREADEVEPILDAL   94 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~   94 (287)
                      +++......+.+.+..
T Consensus        86 ~~Svk~~~~~~~~~~~  101 (152)
T d2pv7a2          86 LTSVKREPLAKMLEVH  101 (152)
T ss_dssp             CCSCCHHHHHHHHHHC
T ss_pred             ecccCHHHHHHHHHHc
Confidence            8776655555454444

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.69  E-value=0.0011  Score=48.27  Aligned_cols=90  Identities=17%  Similarity=0.158  Sum_probs=59.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++++. +.+.        +  .+...+ .|..++   +.+.+.....++|+|+
T Consensus        32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~--------~--~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLS--------R--LGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHH--------T--TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCCcccccchhhccccccceeeecccccc-cccc--------c--cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            58999999999999988899999999886652 1221        1  232222 244443   4455544446899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++.+.  ......++.++...++|.++
T Consensus       100 d~~g~--~~~~~~~~~l~~~G~~v~~G  124 (183)
T d1pqwa_         100 NSLAG--EAIQRGVQILAPGGRFIELG  124 (183)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECS
T ss_pred             ecccc--hHHHHHHHHhcCCCEEEEEc
Confidence            99883  34555667776445777664

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.67  E-value=0.0023  Score=45.96  Aligned_cols=87  Identities=16%  Similarity=0.164  Sum_probs=54.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.+...|.+|+++++++++...         ..+  .+...+ .|..+...-...  ..++|+|+++.
T Consensus        34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~---------~~~--lGa~~~-i~~~~~~~~~~~--~~g~D~v~d~~   99 (171)
T d1iz0a2          34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL---------PLA--LGAEEA-ATYAEVPERAKA--WGGLDLVLEVR   99 (171)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH---------HHH--TTCSEE-EEGGGHHHHHHH--TTSEEEEEECS
T ss_pred             Eeccccchhhhhhhhccccccccccccccccccc---------ccc--ccccee-eehhhhhhhhhc--ccccccccccc
Confidence            5899999999999998899999999988665221         111  122221 244333222222  34899999988


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEe
Q 023078           81 GREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |.   .....++.++...+++.++
T Consensus       100 G~---~~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         100 GK---EVEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             CT---THHHHHTTEEEEEEEEEC-
T ss_pred             ch---hHHHHHHHHhcCCcEEEEe
Confidence            73   2445566666445677654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.0022  Score=44.62  Aligned_cols=31  Identities=19%  Similarity=0.357  Sum_probs=23.6

Q ss_pred             CCcccchHHHHHHHHHHCC----CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~   31 (287)
                      .||||++|+.+++.|+++.    .+++++.++...
T Consensus         7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~   41 (146)
T d1t4ba1           7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG   41 (146)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred             ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccc
Confidence            4999999999999988763    266766665443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.49  E-value=0.00052  Score=50.45  Aligned_cols=32  Identities=28%  Similarity=0.397  Sum_probs=29.2

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      +||+|.+|+.|++.|+++||+|++.+|++++.
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~~   37 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            48889999999999999999999999987663

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0014  Score=47.20  Aligned_cols=90  Identities=12%  Similarity=0.159  Sum_probs=59.1

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|.+|...++.+...|.+|+++++++++.. ..        .+  -+...+ .|.++.   +.+.+.....++|+|+
T Consensus        35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~-~~--------~~--~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IV--------LQ--NGAHEV-FNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HH--------HH--TTCSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             EeccccccccccccccccCcccccccccccccc-cc--------cc--cCcccc-cccccccHHHHhhhhhccCCceEEe
Confidence            488999999999999889999999998765521 11        11  122211 255443   3444455556799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++.+.  ......++.++...+++.++
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLAN--VNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ecccH--HHHHHHHhccCCCCEEEEEe
Confidence            98873  34555667777445777664

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.43  E-value=0.0034  Score=43.58  Aligned_cols=71  Identities=25%  Similarity=0.288  Sum_probs=44.5

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|.+|++++..|..++  .++++++.++.+...       .++. ...-......-. ...+..+.++  ++|+||.
T Consensus         6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-------~Dl~-~~~~~~~~~~~~-~~~~~~~~~~--~aDivVi   74 (144)
T d1mlda1           6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-------ADLS-HIETRATVKGYL-GPEQLPDCLK--GCDVVVI   74 (144)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-------HHHT-TSSSSCEEEEEE-SGGGHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-------HHHh-hhhhhcCCCeEE-cCCChHHHhC--CCCEEEE
Confidence            5899999999999999887  478888876543110       0111 011111122222 3445556676  9999999


Q ss_pred             ccCC
Q 023078           79 INGR   82 (287)
Q Consensus        79 ~a~~   82 (287)
                      .+|.
T Consensus        75 tag~   78 (144)
T d1mlda1          75 PAGV   78 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9885

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.37  E-value=0.0012  Score=46.07  Aligned_cols=29  Identities=28%  Similarity=0.447  Sum_probs=22.6

Q ss_pred             CCcccchHHHHHHHHHHCC---CeEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g---~~V~~l~r~~   29 (287)
                      .||||++|+.|++.|.+++   .++..+..+.
T Consensus         8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           8 VGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             ECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            4999999999999998754   3677665543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.0033  Score=44.12  Aligned_cols=73  Identities=15%  Similarity=0.213  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-+|+.+++.|.++|++|+++..+++.......       .....++.++.||.++++.+.++-- ..+++||-+...
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~   81 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN   81 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence            56899999999999999999999988754221110       0113579999999999998876543 378999877654


Q ss_pred             C
Q 023078           83 E   83 (287)
Q Consensus        83 ~   83 (287)
                      .
T Consensus        82 d   82 (153)
T d1id1a_          82 D   82 (153)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.18  E-value=0.0093  Score=42.80  Aligned_cols=92  Identities=15%  Similarity=0.113  Sum_probs=56.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|++.||+|++.+|++++..+....         ........ -....+.+.+.+.  .+|.++-+...
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~---------~~~~~~~~-~a~~~~~~~~~~~--~~~~ii~~~~~   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN---------EAKGTKVL-GAHSLEEMVSKLK--KPRRIILLVKA   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT---------TTTTSSCE-ECSSHHHHHHHBC--SSCEEEECSCT
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh---------cccccccc-chhhhhhhhhhhc--ccceEEEecCc
Confidence            569999999999999999999999998774322110         01100011 1235566777776  78888876544


Q ss_pred             Cc---cchHHHHHhCCCCCcEEEEeee
Q 023078           83 EA---DEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~---~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      ..   .....++..++..+.+|-.||.
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcc
Confidence            31   1123345555544556655654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.04  E-value=0.0032  Score=45.37  Aligned_cols=93  Identities=16%  Similarity=0.099  Sum_probs=57.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|+..++.+...|.+|++.++++++....         .+..... .+.-+-.+ ++........++|+|++..
T Consensus        38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~---------~~lGa~~-vi~~~~~~-~~~~~~~~~~gvD~vid~v  106 (176)
T d1xa0a2          38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL---------RVLGAKE-VLAREDVM-AERIRPLDKQRWAAAVDPV  106 (176)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH---------HHTTCSE-EEECC----------CCSCCEEEEEECS
T ss_pred             EeccchHHHHHHHHHHHcCCceEEecCchHHHHHH---------Hhcccce-eeecchhH-HHHHHHhhccCcCEEEEcC
Confidence            59999999999999999999999999987763211         1112222 22211111 2223344455899999987


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEeee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +-.  .....++.++...|++.++..
T Consensus       107 gg~--~~~~~l~~l~~~Griv~~G~~  130 (176)
T d1xa0a2         107 GGR--TLATVLSRMRYGGAVAVSGLT  130 (176)
T ss_dssp             TTT--THHHHHHTEEEEEEEEECSCC
T ss_pred             Cch--hHHHHHHHhCCCceEEEeecc
Confidence            733  355667777755577766654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.98  E-value=0.0022  Score=46.38  Aligned_cols=86  Identities=12%  Similarity=-0.001  Sum_probs=48.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|..++..|.++|++|.+++|+++...........   ..................++.++++  ++|+||-+.. 
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~-   81 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI---IAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP-   81 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE---EEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCC---chhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence            569999999999999999999999986552211100000   0000111111111111223456676  8999997643 


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                       ......+++.++
T Consensus        82 -~~~~~~~~~~i~   93 (184)
T d1bg6a2          82 -AIHHASIAANIA   93 (184)
T ss_dssp             -GGGHHHHHHHHG
T ss_pred             -hhHHHHHHHHhh
Confidence             445566666544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.96  E-value=0.009  Score=44.66  Aligned_cols=64  Identities=11%  Similarity=0.055  Sum_probs=45.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC--hHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~d~vi~~a   80 (287)
                      .||..|.+|++.+..+|++|+++.......   .           ..++..+...-.+  .+.+.+.+.  .+|++|+.|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---~-----------p~~~~~~~~~t~~~m~~~~~~~~~--~~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLP---T-----------PPFVKRVDVMTALEMEAAVNASVQ--QQNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCC---C-----------CTTEEEEECCSHHHHHHHHHHHGG--GCSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccC---c-----------ccccccceehhhHHHHHHHHhhhc--cceeEeeee
Confidence            689999999999999999999998865431   1           2455555443221  234444455  789999998


Q ss_pred             CC
Q 023078           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      ++
T Consensus        94 Av   95 (223)
T d1u7za_          94 AV   95 (223)
T ss_dssp             BC
T ss_pred             ch
Confidence            87

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.91  E-value=0.0091  Score=42.22  Aligned_cols=93  Identities=11%  Similarity=0.063  Sum_probs=53.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCC--chhhhhhcCCcEEEEecCCChHHHHhhhcc--------CC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------KG   72 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------~~   72 (287)
                      |.|.+|+.+++.|+++||+|.+.+|++++.........  .....+......++..-+.+.....+++..        ..
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~   87 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   87 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence            67999999999999999999999998766322111100  000111112233344344444444433321        02


Q ss_pred             ccEEEEccCCCccchHHHHHhCC
Q 023078           73 FDVVYDINGREADEVEPILDALP   95 (287)
Q Consensus        73 ~d~vi~~a~~~~~~~~~l~~a~~   95 (287)
                      =++||++....+.....+.+.++
T Consensus        88 g~iiid~st~~p~~~~~~~~~~~  110 (162)
T d3cuma2          88 GTLVLECSTIAPTSARKIHAAAR  110 (162)
T ss_dssp             TCEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            35777777777777777766665

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.71  E-value=0.011  Score=40.97  Aligned_cols=28  Identities=21%  Similarity=0.402  Sum_probs=21.4

Q ss_pred             CCcccchHHHHHHHHHHCC----CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g----~~V~~l~r~   28 (287)
                      .|||||+|+.|++.|+++.    .++..++.+
T Consensus         6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             ECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            4999999999999998753    356655544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.59  E-value=0.0063  Score=43.02  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.+++.|+++||+|++.+|++++
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~   35 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEA   35 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence            57999999999999999999999998776

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.59  E-value=0.0032  Score=39.67  Aligned_cols=64  Identities=16%  Similarity=0.058  Sum_probs=43.1

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      ||+|.-|  |++.|.++|++|.+.++......+.|.          ..++.+..+.  +.+.    ++  ++|.||...+
T Consensus        10 gG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~gh--~~~~----i~--~~d~vV~SsA   69 (89)
T d1j6ua1          10 GGIGMSA--VALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVPH--SADN----WY--DPDLVIKTPA   69 (89)
T ss_dssp             TSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESSC--CTTS----CC--CCSEEEECTT
T ss_pred             CHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEeee--cccc----cC--CCCEEEEecC
Confidence            5555555  788999999999999998765433332          3567665542  2222    23  7899999888


Q ss_pred             CCcc
Q 023078           82 READ   85 (287)
Q Consensus        82 ~~~~   85 (287)
                      ...+
T Consensus        70 I~~~   73 (89)
T d1j6ua1          70 VRDD   73 (89)
T ss_dssp             CCTT
T ss_pred             cCCC
Confidence            7544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.37  E-value=0.013  Score=37.31  Aligned_cols=64  Identities=20%  Similarity=0.294  Sum_probs=43.0

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      ||+|.  +.||+.|.++|++|.+.++......+.+.          ..++.+..+.-.  +.    +.  ++|.||...+
T Consensus        17 gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~L~----------~~Gi~v~~g~~~--~~----i~--~~d~vV~S~A   76 (96)
T d1p3da1          17 GGAGM--SGIAEILLNEGYQISGSDIADGVVTQRLA----------QAGAKIYIGHAE--EH----IE--GASVVVVSSA   76 (96)
T ss_dssp             TSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHHHH----------HTTCEEEESCCG--GG----GT--TCSEEEECTT
T ss_pred             CHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhHHH----------HCCCeEEECCcc--cc----CC--CCCEEEECCC
Confidence            55555  56899999999999999997655332222          356766554432  22    23  7899999888


Q ss_pred             CCcc
Q 023078           82 READ   85 (287)
Q Consensus        82 ~~~~   85 (287)
                      ...+
T Consensus        77 I~~~   80 (96)
T d1p3da1          77 IKDD   80 (96)
T ss_dssp             SCTT
T ss_pred             cCCC
Confidence            7544

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.014  Score=41.81  Aligned_cols=90  Identities=17%  Similarity=0.126  Sum_probs=58.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      +||+|-+|...++.+...|.+|+++++++++....         .+.... ++  .|.+++   +.+.++-...++|+|+
T Consensus        35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~---------~~lGa~-~v--i~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA---------LKAGAW-QV--INYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH---------HHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EccccccchHHHHHHHHhCCeEeecccchHHHHHH---------HhcCCe-EE--EECCCCCHHHHHHHHhCCCCeEEEE
Confidence            58999999999999998999999999998773211         111222 22  255443   3455544456899999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .+.+.  ......++.++...+++..+
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2         103 DSVGR--DTWERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             ECSCG--GGHHHHHHTEEEEEEEEECC
T ss_pred             eCccH--HHHHHHHHHHhcCCeeeecc
Confidence            98874  34455666665333555433

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.29  E-value=0.002  Score=45.94  Aligned_cols=29  Identities=28%  Similarity=0.405  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.+++.|.++|++|++++|+++.
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~   35 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQST   35 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            56999999999999999999999998665

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.16  E-value=0.0036  Score=44.67  Aligned_cols=92  Identities=16%  Similarity=0.164  Sum_probs=53.8

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|...++.....|.+|+++++++++...         ..+......+.+-|... +. .......++|+|+++.
T Consensus        30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~---------~~~lGad~vi~~~~~~~-~~-~~~~~~~gvd~vid~v   98 (167)
T d1tt7a2          30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY---------LKQLGASEVISREDVYD-GT-LKALSKQQWQGAVDPV   98 (167)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH---------HHHHTCSEEEEHHHHCS-SC-CCSSCCCCEEEEEESC
T ss_pred             eCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH---------HHhhcccceEeccchhc-hh-hhcccCCCceEEEecC
Confidence            4899999999999888889999999998876321         12222222211111111 11 1112224799999886


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +-  ......++.++...+++.++.
T Consensus        99 gg--~~~~~~~~~l~~~G~iv~~G~  121 (167)
T d1tt7a2          99 GG--KQLASLLSKIQYGGSVAVSGL  121 (167)
T ss_dssp             CT--HHHHHHHTTEEEEEEEEECCC
T ss_pred             cH--HHHHHHHHHhccCceEEEeec
Confidence            62  234445555554446665543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.84  E-value=0.0043  Score=43.62  Aligned_cols=20  Identities=20%  Similarity=0.370  Sum_probs=17.6

Q ss_pred             CCcccchHHHHHHHHHHCCC
Q 023078            1 MGGTRFIGVFLSRLLVKEGH   20 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~   20 (287)
                      .|||||+|..|++.|.++.+
T Consensus         7 vGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           7 VGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             ETTTSHHHHHHHHHHHTCCS
T ss_pred             ECCCcHHHHHHHHHHHcCCC
Confidence            49999999999999988754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.74  E-value=0.0091  Score=41.72  Aligned_cols=78  Identities=12%  Similarity=0.050  Sum_probs=49.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|++|++.|.+.|++|++..|+.++..+..        ..  .++..    ..   +..++++  ++|+|+-+.  
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~--------~~--~g~~~----~~---~~~~~~~--~~dvIilav--   65 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIA--------EQ--LALPY----AM---SHQDLID--QVDLVILGI--   65 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHH--------HH--HTCCB----CS---SHHHHHH--TCSEEEECS--
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhc--------cc--cceee----ec---hhhhhhh--ccceeeeec--
Confidence            6899999999999999999999999866532111        01  11111    11   2344555  889998665  


Q ss_pred             CccchHHHHHhCCCCCcEE
Q 023078           83 EADEVEPILDALPNLEQFI  101 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i  101 (287)
                      .+.....+++.++..+.+|
T Consensus        66 kp~~~~~vl~~l~~~~~ii   84 (152)
T d2ahra2          66 KPQLFETVLKPLHFKQPII   84 (152)
T ss_dssp             CGGGHHHHHTTSCCCSCEE
T ss_pred             chHhHHHHhhhcccceeEe
Confidence            3455566776665444443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=94.57  E-value=0.043  Score=38.73  Aligned_cols=92  Identities=11%  Similarity=0.085  Sum_probs=56.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEe-cCCChHHHHhhhc---cCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-DRKDYDFVKSSLS---AKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~---~~~~d~vi~   78 (287)
                      |+|.+|...++.+...|.+|+++++++.+...         ..+......+..- ...+.....+.++   ..++|+||.
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~---------a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEV---------AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHHH---------HHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence            47889999999888889999999998776311         1111222222221 1123333333332   247999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++|.. ......++.++...+++.++
T Consensus       105 ~~g~~-~~~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2         105 CSGNE-KCITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             CSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             cCCCh-HHHHHHHHHHhcCCceEEEe
Confidence            98743 33455677888666777665

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=94.52  E-value=0.019  Score=34.75  Aligned_cols=31  Identities=26%  Similarity=0.251  Sum_probs=28.3

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +||+|-+|...++.+...|.+|+++++++++
T Consensus        38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          38 TGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            5999999999999888889999999998766

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.0059  Score=43.22  Aligned_cols=30  Identities=30%  Similarity=0.451  Sum_probs=27.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|.+|+.++..|.+.|++|++++|++...
T Consensus         7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           7 GCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            349999999999999999999999988763

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.42  E-value=0.043  Score=39.53  Aligned_cols=97  Identities=14%  Similarity=0.204  Sum_probs=52.1

Q ss_pred             CCcccchHHHHHHHHHHCCCe-EEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh-HHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~d~vi~   78 (287)
                      +||+|-+|+..++.+...|.+ |++.++++++......        +.... .++...-.+. +.+.++. ..++|+|+.
T Consensus        37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~--------~~gad-~vi~~~~~~~~~~~~~~~-~~GvDvv~D  106 (187)
T d1vj1a2          37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS--------ELGFD-AAVNYKTGNVAEQLREAC-PGGVDVYFD  106 (187)
T ss_dssp             SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH--------HSCCS-EEEETTSSCHHHHHHHHC-TTCEEEEEE
T ss_pred             ECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh--------cccce-EEeeccchhHHHHHHHHh-ccCceEEEe
Confidence            589999999999998888875 4445555444211110        01111 2222222222 3344433 358999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEeeeeEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCSSAGVY  109 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~Ss~~~y  109 (287)
                      +.|-  ......++.++...|++.++..+-|
T Consensus       107 ~vGg--~~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         107 NVGG--DISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             SSCH--HHHHHHHTTEEEEEEEEEC------
T ss_pred             cCCc--hhHHHHhhhccccccEEEecccccc
Confidence            8872  3344555555555678777655433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.40  E-value=0.032  Score=40.32  Aligned_cols=97  Identities=12%  Similarity=0.201  Sum_probs=57.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEE--ecCCCh-HHHHhhhc--cCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--GDRKDY-DFVKSSLS--AKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~-~~~~~~~~--~~~~d~   75 (287)
                      +||+|-+|...++.....|.+|++++|+++...+..     ....+......+..  .|..+. +.+.+...  ..++|+
T Consensus        36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~-----~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdv  110 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKL  110 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEE
T ss_pred             eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHH-----hhhhhccccEEEeccccchhHHHHHHHHHHhhccCCceE
Confidence            489999999999988888999999998766532111     01111122222211  122111 12232221  236999


Q ss_pred             EEEccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           76 VYDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        76 vi~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |+++.|  .......++.++...++|.++
T Consensus       111 v~D~vg--~~~~~~~~~~l~~~G~~v~~G  137 (189)
T d1gu7a2         111 ALNCVG--GKSSTGIARKLNNNGLMLTYG  137 (189)
T ss_dssp             EEESSC--HHHHHHHHHTSCTTCEEEECC
T ss_pred             EEECCC--cchhhhhhhhhcCCcEEEEEC
Confidence            999876  334566778888666787554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=94.23  E-value=0.012  Score=40.83  Aligned_cols=70  Identities=16%  Similarity=0.176  Sum_probs=43.3

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhh-hhhcCCcEEEEecCCChHHHHhhhccCCccEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi   77 (287)
                      +| +|++|..++..|+.+|  .+++++++++.....+..   +... ...........+|+   +    .++  ++|+|+
T Consensus        11 IG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~---Dl~~a~~~~~~~~~~~~d~---~----~~~--~adivv   77 (146)
T d1ez4a1          11 VG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL---DLEDAQAFTAPKKIYSGEY---S----DCK--DADLVV   77 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH---HHHGGGGGSCCCEEEECCG---G----GGT--TCSEEE
T ss_pred             EC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHH---HHhccccccCCceEeeccH---H----Hhc--cccEEE
Confidence            36 5999999999999987  689999988754211110   0000 11123344445543   2    244  899999


Q ss_pred             EccCCC
Q 023078           78 DINGRE   83 (287)
Q Consensus        78 ~~a~~~   83 (287)
                      .++|..
T Consensus        78 itag~~   83 (146)
T d1ez4a1          78 ITAGAP   83 (146)
T ss_dssp             ECCCC-
T ss_pred             Eecccc
Confidence            998863

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=94.15  E-value=0.037  Score=39.64  Aligned_cols=91  Identities=13%  Similarity=0.173  Sum_probs=54.7

Q ss_pred             CcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh----HHHHhhhccCCccEE
Q 023078            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~d~v   76 (287)
                      |+ |.+|...++.+...|. +|+++++++.+.. ..        .+..+. .++...-.+.    +.+.+.....++|+|
T Consensus        36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~-~a--------~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv  104 (182)
T d1vj0a2          36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK-LA--------EEIGAD-LTLNRRETSVEERRKAIMDITHGRGADFI  104 (182)
T ss_dssp             CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HH--------HHTTCS-EEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CC-Cccchhheeccccccccccccccccccccc-cc--------ccccce-EEEeccccchHHHHHHHHHhhCCCCceEE
Confidence            65 8899999999988896 7999999877621 11        111121 2222111222    223343444579999


Q ss_pred             EEccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        77 i~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      |.+.|.. ......++.++...+++.++
T Consensus       105 id~vG~~-~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         105 LEATGDS-RALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             EECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             eecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence            9998753 33455677777445666655

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.0026  Score=46.60  Aligned_cols=102  Identities=16%  Similarity=0.220  Sum_probs=57.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhh-cCCc-----------EEEEecCCChHHHHhhhcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKI-----------LHLKGDRKDYDFVKSSLSA   70 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~d~~~~~~~~~~~~~   70 (287)
                      |+|.+|+.++..++..|++|++++++++........ ....+... ..+.           .-....+....++.+++. 
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~-i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~~a~~-   88 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG-IEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVH-   88 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTT-
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh-HHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhHhhhc-
Confidence            569999999999999999999999987642211100 00000000 0000           000000111123445566 


Q ss_pred             CCccEEEEccCCCccchHHHHHhCC--CCCcEEEEeeee
Q 023078           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (287)
Q Consensus        71 ~~~d~vi~~a~~~~~~~~~l~~a~~--~~~~~i~~Ss~~  107 (287)
                       ++|.|+-+...+.+.-+.++..+.  -....|+.|+++
T Consensus        89 -~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS  126 (192)
T d1f0ya2          89 -STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTS  126 (192)
T ss_dssp             -SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred             -ccceehhhcccchhHHHHHHHHHhhhcccCceeeccCc
Confidence             899999998887776666666655  233455555544

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.10  E-value=0.0095  Score=41.60  Aligned_cols=29  Identities=24%  Similarity=0.315  Sum_probs=26.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.+|+.+++.|+++|++|++.++.+++
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            57999999999999999999998887665

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.92  E-value=0.085  Score=37.70  Aligned_cols=78  Identities=17%  Similarity=0.098  Sum_probs=51.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|..-|.+|++.+|.+.....                        .-.+++.++++  .+|+|+.+...
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------------------------~~~~~l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGPW------------------------RFTNSLEEALR--EARAAVCALPL  102 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSSS------------------------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccccccccceeeeeccccccccccccccccce------------------------eeeechhhhhh--ccchhhccccc
Confidence            57899999999999999999999987543110                        01123556777  88988876655


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +...    ....++.++....||.+|..
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~RG  130 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGRA  130 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             ccccccccccceeeeccccceEEecccc
Confidence            4321    24455566655566666643

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.90  E-value=0.018  Score=39.77  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=26.0

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA   30 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~   30 (287)
                      +||+|.+|+.++..|..++  .++.++++++.
T Consensus         6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            4899999999999999887  58999998753

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.76  E-value=0.04  Score=39.20  Aligned_cols=89  Identities=13%  Similarity=0.069  Sum_probs=55.3

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEEE
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi~   78 (287)
                      |+|.+|...++.+...|. +|+++++++.+...         ..+... .+++  |..+   .+.+.+.....++|+||.
T Consensus        35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~---------a~~lGa-~~~i--~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEA---------AKFYGA-TDIL--NYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHH---------HHHHTC-SEEE--CGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             cCCcchhhhhhhhhcccccccccccchhhhHHH---------HHhhCc-cccc--cccchhHHHHHHHHhhccCcceEEE
Confidence            359999998888888885 79999988765211         111111 1222  3322   345556555567999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++|.. ......++.++...+++.++
T Consensus       103 ~~g~~-~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         103 AGGGS-ETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             CSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             ccCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            98854 23345567777555666655

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.74  E-value=0.081  Score=37.83  Aligned_cols=76  Identities=17%  Similarity=0.156  Sum_probs=51.8

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|..|++++..|.+.|. ++++..|+++...+...  ...++.. .........++.+.+.+.+.+.  .+|+||++..
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~--l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp   99 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA--FAQRVNE-NTDCVVTVTDLADQQAFAEALA--SADILTNGTK   99 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH--HHHHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH--HHHHHHh-hcCcceEeeecccccchhhhhc--ccceeccccC
Confidence            568889999999999985 78899998765322110  0001111 1234455678888888888887  8999999876


Q ss_pred             CC
Q 023078           82 RE   83 (287)
Q Consensus        82 ~~   83 (287)
                      ..
T Consensus       100 ~G  101 (182)
T d1vi2a1         100 VG  101 (182)
T ss_dssp             TT
T ss_pred             Cc
Confidence            43

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=93.63  E-value=0.0095  Score=41.97  Aligned_cols=63  Identities=19%  Similarity=0.168  Sum_probs=44.1

Q ss_pred             CcccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+ |-+|+.+++.|.+.|. ++++..|+..+......        +  -+.+     ..+.+++.+.+.  ++|+||.+.
T Consensus        31 Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~--------~--~~~~-----~~~~~~~~~~l~--~~Divi~at   92 (159)
T d1gpja2          31 GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR--------D--LGGE-----AVRFDELVDHLA--RSDVVVSAT   92 (159)
T ss_dssp             SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH--------H--HTCE-----ECCGGGHHHHHH--TCSEEEECC
T ss_pred             CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH--------h--hhcc-----cccchhHHHHhc--cCCEEEEec
Confidence            54 9999999999999996 68889988666322111        1  1222     234456777787  899999987


Q ss_pred             CC
Q 023078           81 GR   82 (287)
Q Consensus        81 ~~   82 (287)
                      +.
T Consensus        93 ss   94 (159)
T d1gpja2          93 AA   94 (159)
T ss_dssp             SS
T ss_pred             CC
Confidence            64

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.55  E-value=0.015  Score=41.90  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=22.4

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEec
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r   27 (287)
                      .|||||+|+.|++.|.++. .++..+..
T Consensus        11 lGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1          11 LGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             ESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            4999999999999999975 47766654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=93.53  E-value=0.02  Score=39.38  Aligned_cols=28  Identities=11%  Similarity=0.156  Sum_probs=23.9

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~   28 (287)
                      +||+|.+|+.++..|..++  .++.+++..
T Consensus         6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           6 VGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             ECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            4899999999999999987  378888864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.43  E-value=0.076  Score=38.54  Aligned_cols=80  Identities=14%  Similarity=0.089  Sum_probs=48.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|..-|.+|++.++..+.....             ..        ...+++.++++  .+|+|+.+...
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-------------~~--------~~~~~l~~~l~--~sDii~~~~pl  106 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-------------KG--------YYVDSLDDLYK--QADVISLHVPD  106 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-------------TT--------CBCSCHHHHHH--HCSEEEECSCC
T ss_pred             cccccchhHHHhHhhhcccccccCccccccccc-------------ce--------eeecccccccc--ccccccccCCc
Confidence            679999999999998999999998765431110             01        11234556666  67877765544


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +..    -....++.++....||.+|-
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cccccccccHHHHhhhCCccEEEecCc
Confidence            322    12344555554445555553

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.39  E-value=0.099  Score=37.26  Aligned_cols=84  Identities=18%  Similarity=0.178  Sum_probs=50.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc-ccccCCC-CCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|..|..|+..|.++|++|.+..|..+. ..+.+.. .....     -.......++.-.+++.++++  ++|+|+.+.
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~av   79 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPR-----LGVKLNGVEIFWPEQLEKCLE--NAEVVLLGV   79 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTT-----TTBCCCSEEEECGGGHHHHHT--TCSEEEECS
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhh-----hcchhccccccccccHHHHHh--ccchhhccc
Confidence            67999999999999999999999985432 1111100 00000     011111112233456777787  899998754


Q ss_pred             CCCccchHHHHHhCC
Q 023078           81 GREADEVEPILDALP   95 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~   95 (287)
                      .  ....+.+++.+.
T Consensus        80 p--s~~~~~~~~~l~   92 (180)
T d1txga2          80 S--TDGVLPVMSRIL   92 (180)
T ss_dssp             C--GGGHHHHHHHHT
T ss_pred             c--hhhhHHHHHhhc
Confidence            3  556666776654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.79  E-value=0.25  Score=32.85  Aligned_cols=26  Identities=19%  Similarity=0.423  Sum_probs=22.0

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEe
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFT   26 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~   26 (287)
                      .|++|..|+.+.+.+.++++++.+..
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            48999999999998888898877643

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.66  E-value=0.088  Score=37.02  Aligned_cols=93  Identities=13%  Similarity=0.210  Sum_probs=52.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~   78 (287)
                      +|++|-+|...++.+...| .+|++.++++.+.. .        ..+.... ..+..+-.| .+.+.+.....++|+|+.
T Consensus        34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~-~--------~~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid  103 (170)
T d1jvba2          34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-A--------AKRAGAD-YVINASMQDPLAEIRRITESKGVDAVID  103 (170)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-H--------HHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             EeccccceeeeeecccccccccccccccchhhHH-H--------HHHcCCc-eeeccCCcCHHHHHHHHhhcccchhhhc
Confidence            4889999999999888888 58888888866521 1        1111121 223222222 233343333347999999


Q ss_pred             ccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           79 INGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +++.. ......++.++...+++.++
T Consensus       104 ~~g~~-~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         104 LNNSE-KTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             SCCCH-HHHTTGGGGEEEEEEEEECC
T ss_pred             ccccc-hHHHhhhhhcccCCEEEEec
Confidence            87732 11122334444334666554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=92.66  E-value=0.21  Score=34.95  Aligned_cols=87  Identities=15%  Similarity=0.156  Sum_probs=56.1

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      | +|-+|...++.+...|.+++++++++++.. .        ..+.  +... ..|..+.+......+  ++|++|.+.+
T Consensus        38 G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~--------a~~l--Gad~-~i~~~~~~~~~~~~~--~~D~vid~~g  102 (168)
T d1uufa2          38 G-IGGLGHMGIKLAHAMGAHVVAFTTSEAKRE-A--------AKAL--GADE-VVNSRNADEMAAHLK--SFDFILNTVA  102 (168)
T ss_dssp             C-CSHHHHHHHHHHHHTTCEEEEEESSGGGHH-H--------HHHH--TCSE-EEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred             c-cchHHHHHHHHhhcccccchhhccchhHHH-H--------Hhcc--CCcE-EEECchhhHHHHhcC--CCceeeeeee
Confidence            5 488999999888888999999998776521 1        1111  2221 236666666666565  8999999987


Q ss_pred             CCccchHHHHHhCCCCCcEEEEe
Q 023078           82 READEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ... .....++.++.-.+++.++
T Consensus       103 ~~~-~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         103 APH-NLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             SCC-CHHHHHTTEEEEEEEEECC
T ss_pred             cch-hHHHHHHHHhcCCEEEEec
Confidence            542 3444555555445666554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.64  E-value=0.02  Score=39.74  Aligned_cols=68  Identities=19%  Similarity=0.346  Sum_probs=42.4

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhh---h-cCCcEEEEecCCChHHHHhhhccCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE---F-SSKILHLKGDRKDYDFVKSSLSAKGFD   74 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~d~~~~~~~~~~~~~~~~d   74 (287)
                      +|| |.+|+.++..|+.++  .++.+++++++......     .++..   + ...+.+..+|.       +.++  ++|
T Consensus        12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a-----~Dl~~~~~~~~~~~~~~~~d~-------~~l~--daD   76 (148)
T d1ldna1          12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDA-----MDFNHGKVFAPKPVDIWHGDY-------DDCR--DAD   76 (148)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHHHTTSSSSCCEEEECCG-------GGTT--TCS
T ss_pred             ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchh-----ccHhhCccccCCCeEEEECCH-------HHhc--cce
Confidence            475 999999999999886  48999998765521110     11111   1 12333333332       3355  899


Q ss_pred             EEEEccCCC
Q 023078           75 VVYDINGRE   83 (287)
Q Consensus        75 ~vi~~a~~~   83 (287)
                      +|+.+++..
T Consensus        77 vvvitag~~   85 (148)
T d1ldna1          77 LVVICAGAN   85 (148)
T ss_dssp             EEEECCSCC
T ss_pred             eEEEecccc
Confidence            999998864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.62  E-value=0.053  Score=36.36  Aligned_cols=66  Identities=17%  Similarity=0.069  Sum_probs=48.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |-|-+|+.+++.|.  +++|.++..++.......           ..++.++.||.++++.+.++-- .+++.++-+...
T Consensus         7 G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-----------~~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi~~~~~   72 (129)
T d2fy8a1           7 GWSESTLECLRELR--GSEVFVLAEDENVRKKVL-----------RSGANFVHGDPTRVSDLEKANV-RGARAVIVNLES   72 (129)
T ss_dssp             SCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-----------HTTCEEEESCTTSHHHHHHTTC-TTCSEEEECCSS
T ss_pred             CCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-----------hcCccccccccCCHHHHHHhhh-hcCcEEEEeccc
Confidence            46889999999984  667888888776532111           3688999999999988877533 378888866554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.40  E-value=0.11  Score=36.96  Aligned_cols=90  Identities=17%  Similarity=0.157  Sum_probs=55.7

Q ss_pred             CCcccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a   80 (287)
                      +||+|-+|+..++.+...|.+|+++++++++... +        .+  .+...+ .|..+.+ ..+.+.....|.++++.
T Consensus        38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~-~--------~~--lGad~v-i~~~~~~-~~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY-L--------KS--LGASRV-LPRDEFA-ESRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH-H--------HH--HTEEEE-EEGGGSS-SCCSSCCCCEEEEEESS
T ss_pred             EEccccchHHHHHHHHHcCCCeEEEecchhHHHH-H--------Hh--hccccc-cccccHH-HHHHHHhhcCCeeEEEc
Confidence            5999999999999999999999999998877321 1        11  122222 2332222 22334444689999877


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEee
Q 023078           81 GREADEVEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +-.  .....++.++...+++.++.
T Consensus       105 gg~--~~~~~l~~l~~~Griv~~G~  127 (177)
T d1o89a2         105 GDK--VLAKVLAQMNYGGCVAACGL  127 (177)
T ss_dssp             CHH--HHHHHHHTEEEEEEEEECCC
T ss_pred             chH--HHHHHHHHhccccceEeecc
Confidence            632  34455555554446665543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.39  E-value=0.17  Score=34.58  Aligned_cols=29  Identities=28%  Similarity=0.462  Sum_probs=23.2

Q ss_pred             CCcccchHHHHHHHHHHC---CCeEEEEecCC
Q 023078            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGK   29 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g~~V~~l~r~~   29 (287)
                      +|++|.+|++++-.|..+   ..++.+++..+
T Consensus         6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            589999999999887543   47899998754

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.5  Score=32.90  Aligned_cols=90  Identities=14%  Similarity=0.133  Sum_probs=56.2

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCChHHHHhhhc---cCCccEEE
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~---~~~~d~vi   77 (287)
                      |.|.+|...++.+...|. +|++.++++.+...         ..+  -+. .++..+-.+.....+.+.   ..++|+||
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~---------a~~--~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK---------AKE--IGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH---------HHH--TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHHH---------HHH--hCCcccccccccccccccccccccCCCCceEEE
Confidence            459999999999988897 79999988766211         011  122 222333334433333332   24799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .+.|.. ......++.++.-.++++++
T Consensus       103 d~~G~~-~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         103 ECTGAE-ASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             ECSCCH-HHHHHHHHHSCTTCEEEECS
T ss_pred             eccCCc-hhHHHHHHHhcCCCEEEEEe
Confidence            988853 23455677787556777665

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.29  E-value=0.14  Score=35.48  Aligned_cols=19  Identities=21%  Similarity=0.135  Sum_probs=17.0

Q ss_pred             CCcccchHHHHHHHHHHCC
Q 023078            1 MGGTRFIGVFLSRLLVKEG   19 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g   19 (287)
                      +||+|++|++++..|...+
T Consensus        10 iGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1          10 TGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             SSTTSHHHHHHHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHhcc
Confidence            6999999999999998764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.21  E-value=0.14  Score=36.83  Aligned_cols=80  Identities=16%  Similarity=0.047  Sum_probs=50.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|..-|.+|+..++.......               ..  .     ..+.+.++++  ..|+|+.+...
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---------------~~--~-----~~~~l~ell~--~sDii~i~~pl  106 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---------------NA--T-----QVQHLSDLLN--MSDVVSLHVPE  106 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---------------TC--E-----ECSCHHHHHH--HCSEEEECCCS
T ss_pred             ecccchhhhhhhcccccceEeeccccccchhh---------------hh--h-----hhhhHHHHHh--hccceeecccC
Confidence            67999999999999999999999986543211               11  0     1124556666  67877765554


Q ss_pred             Ccc----chHHHHHhCCCCCcEEEEeee
Q 023078           83 EAD----EVEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~----~~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +..    -....++.++....||.+|-.
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1         107 NPSTKNMMGAKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred             CcchhhhccHHHHhhCCCCCEEEEcCcH
Confidence            322    134556666655556655543

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.16  E-value=0.18  Score=36.62  Aligned_cols=91  Identities=14%  Similarity=0.098  Sum_probs=49.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |++..|..+++.|++.|++|.++...+++............+.. ..++.++..+-.+.+.+.+.++..++|+++.+...
T Consensus         7 ~~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~-~~~i~~~~~~~~~~~~~~~~i~~~~~Dlii~~g~~   85 (203)
T d2blna2           7 AYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA-ERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYR   85 (203)
T ss_dssp             ECHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH-HHTCCEECCSCCCSHHHHHHHHHTCCSEEEEESCC
T ss_pred             ecCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH-HcCCcceecccccchhhhhhhhhhcccceeeeecc
Confidence            34567999999999999999876644333111111111111111 23566555333344445566676799999877654


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                      ..-. ..+++..+
T Consensus        86 ~ii~-~~il~~~~   97 (203)
T d2blna2          86 HLIY-DEILQLAP   97 (203)
T ss_dssp             SCCC-HHHHTTCT
T ss_pred             cchh-cccchhhH
Confidence            3322 34555543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.92  E-value=0.05  Score=38.35  Aligned_cols=87  Identities=11%  Similarity=0.095  Sum_probs=51.0

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC-ChHHHHhhhccCCccEEEEccCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      +|.+|...++.+...|.+|+++++++.+..         ...+.... +++  |.. +.+......+  ++|+++.+.+.
T Consensus        36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~---------~a~~lGa~-~~i--~~~~~~~~~~~~~~--~~d~vi~~~~~  101 (168)
T d1piwa2          36 LGGIGSMGTLISKAMGAETYVISRSSRKRE---------DAMKMGAD-HYI--ATLEEGDWGEKYFD--TFDLIVVCASS  101 (168)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEEESSSTTHH---------HHHHHTCS-EEE--EGGGTSCHHHHSCS--CEEEEEECCSC
T ss_pred             CCCcchhHHHHhhhccccccccccchhHHH---------HhhccCCc-EEe--eccchHHHHHhhhc--ccceEEEEecC
Confidence            489999988887778999999999877632         11122222 222  222 2333444444  89999998765


Q ss_pred             Cccc-hHHHHHhCCCCCcEEEEe
Q 023078           83 EADE-VEPILDALPNLEQFIYCS  104 (287)
Q Consensus        83 ~~~~-~~~l~~a~~~~~~~i~~S  104 (287)
                      .... ....++.++...+++.++
T Consensus       102 ~~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         102 LTDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             STTCCTTTGGGGEEEEEEEEECC
T ss_pred             CccchHHHHHHHhhccceEEEec
Confidence            4332 233444555334666554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.68  E-value=0.014  Score=40.12  Aligned_cols=68  Identities=19%  Similarity=0.328  Sum_probs=39.0

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCccccccCCCCCchhhhh---hcCCcEEEEecCCChHHHHhhhccCCccE
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~   75 (287)
                      +|+ |.+|+.++-.|+.++  .+++++++++.....+     ..++..   .........+   +.    +.++  ++|+
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~-----a~Dl~~~~~~~~~~~~~~~---~~----~~~~--~adi   71 (142)
T d1y6ja1           7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGE-----AMDINHGLPFMGQMSLYAG---DY----SDVK--DCDV   71 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHH-----HHHHTTSCCCTTCEEEC-----CG----GGGT--TCSE
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCcccee-----eeeeccCcccCCCeeEeeC---cH----HHhC--CCce
Confidence            475 999999999999886  4899999887652111     111110   1122222222   22    3355  8999


Q ss_pred             EEEccCCC
Q 023078           76 VYDINGRE   83 (287)
Q Consensus        76 vi~~a~~~   83 (287)
                      |+-++|..
T Consensus        72 vvitag~~   79 (142)
T d1y6ja1          72 IVVTAGAN   79 (142)
T ss_dssp             EEECCCC-
T ss_pred             EEEecccc
Confidence            99998864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.68  E-value=0.042  Score=39.17  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=27.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |.|..|..+++.|++.||+|.+.+|++++.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.57  E-value=0.2  Score=36.22  Aligned_cols=79  Identities=15%  Similarity=0.078  Sum_probs=50.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-||+.+++.|..-|.+|++.++.......              ..+.        ..++.++++  .+|+|+.+...
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~~~--------~~~l~~l~~--~~D~v~~~~pl  107 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------------PDFD--------YVSLEDLFK--QSDVIDLHVPG  107 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------------TTCE--------ECCHHHHHH--HCSEEEECCCC
T ss_pred             ecccccccccccccccceeeeccCCccchhhh--------------cchh--------HHHHHHHHH--hcccceeeecc
Confidence            67999999999999999999999987544110              1111        123455666  67888765544


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss  105 (287)
                      +...    ....++.++...-+|.+|-
T Consensus       108 t~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         108 IEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             cccccccccHHHhhccCCceEEEeccc
Confidence            3321    3445566665556665554

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.07  E-value=0.063  Score=39.16  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.||+|..++..|++.|++|++++.++..
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            68999999999999999999999987655

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.97  E-value=0.25  Score=38.04  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (287)
                      .||..|.+|++.|+.+|++|+.+.+..+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            6899999999999999999999988654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=90.72  E-value=0.045  Score=38.43  Aligned_cols=88  Identities=15%  Similarity=0.121  Sum_probs=47.1

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEE-ecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEE
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~   78 (287)
                      .|++|..|+.+++.+.+. +.++++. +|........-....   ......++. +.      +.+...++  .+|+||.
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~---~~~~~~~~~-~~------~~~~~~~~--~~DViID   77 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL---AGAGKTGVT-VQ------SSLDAVKD--DFDVFID   77 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS---SSSSCCSCC-EE------SCSTTTTT--SCSEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhh---hccccCCce-ee------ccHHHHhc--ccceEEE
Confidence            599999999999999886 5676554 444332110000000   000001111 11      12233455  8999999


Q ss_pred             ccCCCccchHHHHHhCC-CCCcEEE
Q 023078           79 INGREADEVEPILDALP-NLEQFIY  102 (287)
Q Consensus        79 ~a~~~~~~~~~l~~a~~-~~~~~i~  102 (287)
                      +.-+  +.+...++.|. ...++|.
T Consensus        78 Fs~p--~~~~~~~~~a~~~~~~~Vi  100 (162)
T d1diha1          78 FTRP--EGTLNHLAFCRQHGKGMVI  100 (162)
T ss_dssp             CSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred             eccH--HHHHHHHHHHHhccceeEE
Confidence            8653  55566666665 4445553

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=90.65  E-value=0.093  Score=37.93  Aligned_cols=29  Identities=14%  Similarity=0.095  Sum_probs=25.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|-||+.+++.|..-|.+|.+.++....
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ccccccccceeeeeccccceeeccCcccc
Confidence            67999999999999999999999986543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.38  E-value=0.45  Score=33.45  Aligned_cols=92  Identities=11%  Similarity=0.081  Sum_probs=55.6

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |.|-+|...++.+...| .+|+++++++++...         -.++.+...+-.-|-.+ .+.+.+.....++|++|.+.
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~---------Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~  107 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEK---------AMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI  107 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH---------HHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHHH---------HHhcCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence            46999999999999998 589999998877311         11112222221122222 34455555556899999988


Q ss_pred             CCCccchHHHHHhCC-CCCcEEEEe
Q 023078           81 GREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~-~~~~~i~~S  104 (287)
                      +.... ....+..+. +-.+++.++
T Consensus       108 g~~~~-~~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2         108 GHLET-MIDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             CCHHH-HHHHHTTSCTTTCEEEECS
T ss_pred             CchHH-HHHHHHHhhcCCeEEEEEE
Confidence            75422 233334444 556777666

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=90.32  E-value=0.26  Score=34.80  Aligned_cols=74  Identities=15%  Similarity=0.101  Sum_probs=39.0

Q ss_pred             CCcccchHHHHHHHHHHC---C--C--eEEEEecCCccccccCCCCCchhhhhh-cCCcEEEEecCCChHHHHhhhccCC
Q 023078            1 MGGTRFIGVFLSRLLVKE---G--H--QVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKG   72 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~---g--~--~V~~l~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~   72 (287)
                      |||+|.||++++..|++.   |  .  .++.++......  .+.. ...++... .+....+..  .  ....+.++  +
T Consensus        30 ~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~--~l~g-~~mdl~d~a~~~~~~~~~--~--~~~~~~~~--~  100 (175)
T d7mdha1          30 SGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQ--ALEG-VAMELEDSLYPLLREVSI--G--IDPYEVFE--D  100 (175)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH--HHHH-HHHHHHTTTCTTEEEEEE--E--SCHHHHTT--T
T ss_pred             ECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccc--hhcc-hhhhhcccccccccCccc--c--ccchhhcc--C
Confidence            699999999999999874   3  1  445555544321  1100 00011100 112211111  1  12345566  9


Q ss_pred             ccEEEEccCCC
Q 023078           73 FDVVYDINGRE   83 (287)
Q Consensus        73 ~d~vi~~a~~~   83 (287)
                      .|+||-.+|..
T Consensus       101 aDvVvi~ag~~  111 (175)
T d7mdha1         101 VDWALLIGAKP  111 (175)
T ss_dssp             CSEEEECCCCC
T ss_pred             CceEEEeeccC
Confidence            99999999874

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.19  E-value=0.12  Score=36.72  Aligned_cols=28  Identities=29%  Similarity=0.504  Sum_probs=22.6

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecC
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG   28 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~   28 (287)
                      .||||++|+.|++.|.++. .++..+..+
T Consensus         7 vGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           7 IGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             ECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            4999999999999999875 477766544

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.02  E-value=0.095  Score=37.33  Aligned_cols=27  Identities=19%  Similarity=0.322  Sum_probs=22.2

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEec
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR   27 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~r   27 (287)
                      .|||||+|+.|++.|.++ ..++..+..
T Consensus         7 iGATGyvG~eLlrlL~~HP~~ei~~l~~   34 (179)
T d2g17a1           7 VGASGYAGAELVSYVNRHPHMTITALTV   34 (179)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence            499999999999999997 467766543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=89.72  E-value=0.06  Score=37.03  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=24.8

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (287)
                      +| +|++|+.++..|+.+|  .+++++++++.+
T Consensus         7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            46 5999999999999876  589998887654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.68  E-value=0.22  Score=34.31  Aligned_cols=18  Identities=17%  Similarity=0.032  Sum_probs=16.2

Q ss_pred             CCcccchHHHHHHHHHHC
Q 023078            1 MGGTRFIGVFLSRLLVKE   18 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~   18 (287)
                      +||+|.+|++++..|...
T Consensus         9 iGA~G~VG~~la~~l~~~   26 (154)
T d5mdha1           9 TGAAGQIAYSLLYSIGNG   26 (154)
T ss_dssp             SSTTSHHHHTTHHHHHTT
T ss_pred             ECCCCHHHHHHHHHHHHH
Confidence            699999999999999864

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.65  E-value=0.33  Score=31.32  Aligned_cols=83  Identities=14%  Similarity=0.097  Sum_probs=52.0

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|..-++.|++.|.+|++++.........+.         ...+++++...+.+.+     +.  +++.|+-+.+ 
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~d-----l~--~~~lv~~at~-   81 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVWA---------NEGMLTLVEGPFDETL-----LD--SCWLAIAATD-   81 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH---------TTTSCEEEESSCCGGG-----GT--TCSEEEECCS-
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH---------hcCCceeeccCCCHHH-----hC--CCcEEeecCC-
Confidence            68999999999999999999999876654322211         1346777776665322     44  7788875443 


Q ss_pred             CccchHHHHHhCCCCCcEEE
Q 023078           83 EADEVEPILDALPNLEQFIY  102 (287)
Q Consensus        83 ~~~~~~~l~~a~~~~~~~i~  102 (287)
                      +..-...+.+.++....+|.
T Consensus        82 d~~~n~~i~~~a~~~~ilVN  101 (113)
T d1pjqa1          82 DDTVNQRVSDAAESRRIFCN  101 (113)
T ss_dssp             CHHHHHHHHHHHHHTTCEEE
T ss_pred             CHHHHHHHHHHHHHcCCEEE
Confidence            22333455555553333443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.56  E-value=0.019  Score=41.65  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|.-|++++..|.+.|++|.+.+|+++.
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~   42 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEE   42 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHH
Confidence            68999999999999999999999997654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.49  E-value=0.18  Score=33.22  Aligned_cols=29  Identities=24%  Similarity=0.268  Sum_probs=26.9

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|..++..|.++|.+|+++.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            78999999999999999999999998754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.27  E-value=0.19  Score=32.76  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|..++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            68999999999999999999999998653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.79  E-value=0.19  Score=33.14  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=26.6

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            68999999999999999999999998654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=88.63  E-value=0.15  Score=34.70  Aligned_cols=30  Identities=13%  Similarity=0.190  Sum_probs=25.7

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (287)
                      +|| |.+|+.++..|+.++  .++.+++.++..
T Consensus         6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~   37 (142)
T d1guza1           6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGI   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSH
T ss_pred             ECc-CHHHHHHHHHHHhCCCCceEEEecccccc
Confidence            475 999999999999886  589999988765

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=88.62  E-value=0.095  Score=37.62  Aligned_cols=29  Identities=10%  Similarity=0.138  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|.+|+.++..++..|++|+++++++..
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            45999999999999999999999998765

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.53  E-value=0.16  Score=36.58  Aligned_cols=84  Identities=14%  Similarity=0.089  Sum_probs=49.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.||+.+++.|..-|.+|...++..........           ..       ....+++.++++  .+|+|+-....
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-----------~~-------~~~~~~l~~ll~--~sD~v~l~~pl  113 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-----------YQ-------ATFHDSLDSLLS--VSQFFSLNAPS  113 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-----------HT-------CEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ecccchHHHHHHHHhhccccccccccccccchhhc-----------cc-------ccccCCHHHHHh--hCCeEEecCCC
Confidence            57999999999999999999999876543111000           00       011234566666  67877755444


Q ss_pred             Cccc----hHHHHHhCCCCCcEEEEeee
Q 023078           83 EADE----VEPILDALPNLEQFIYCSSA  106 (287)
Q Consensus        83 ~~~~----~~~l~~a~~~~~~~i~~Ss~  106 (287)
                      +.+.    ....++.++....||.+|-.
T Consensus       114 t~~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         114 TPETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             CchHhheecHHHhhCcCCccEEEecCCc
Confidence            3221    23455556554555555543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=88.51  E-value=0.039  Score=38.20  Aligned_cols=81  Identities=16%  Similarity=0.145  Sum_probs=42.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |+|.+|+++++.|.+.++.+.+..|+.++..+.         .+....      ...+   ..++.+  ..|+|+-+...
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l---------~~~~~~------~~~~---~~~~~~--~~DiVil~v~d   65 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNL---------AEVYGG------KAAT---LEKHPE--LNGVVFVIVPD   65 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHH---------HHHTCC------CCCS---SCCCCC-----CEEECSCT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcch---------hhcccc------cccc---hhhhhc--cCcEEEEeccc
Confidence            689999999998765444445788877663221         111111      1111   223455  78999876643


Q ss_pred             CccchHHHHHhCC-CCCcEEEEee
Q 023078           83 EADEVEPILDALP-NLEQFIYCSS  105 (287)
Q Consensus        83 ~~~~~~~l~~a~~-~~~~~i~~Ss  105 (287)
                        .....+++.+. +.+-+|++|+
T Consensus        66 --~~i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          66 --RYIKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             --TTHHHHHTTTCCSSCCEEECCS
T ss_pred             --hhhhHHHhhhcccceeeeeccc
Confidence              44556666665 4455566554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.34  E-value=0.3  Score=32.12  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|..++..|.+.|.+|+++.+.+.-
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            78999999999999999999999997654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=88.33  E-value=0.86  Score=28.03  Aligned_cols=63  Identities=13%  Similarity=0.219  Sum_probs=41.7

Q ss_pred             ccchHHHHHHHHHHCCCeEEEEecCCccc-cccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      -|-.|.++++.|.++|++|++.+.+.... .+.+           .....++.+.. +.+.    +.  ++|.||-.-|.
T Consensus        13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~----~~--~~d~vi~SPGi   74 (93)
T d2jfga1          13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL-----------PEAVERHTGSL-NDEW----LM--AADLIVASPGI   74 (93)
T ss_dssp             CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS-----------CTTSCEEESBC-CHHH----HH--HCSEEEECTTS
T ss_pred             ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH-----------hhccceeeccc-chhh----hc--cCCEEEECCCC
Confidence            47789999999999999999999866542 1122           23444555443 2222    33  67999987776


Q ss_pred             Cc
Q 023078           83 EA   84 (287)
Q Consensus        83 ~~   84 (287)
                      ..
T Consensus        75 ~~   76 (93)
T d2jfga1          75 AL   76 (93)
T ss_dssp             CT
T ss_pred             CC
Confidence            43

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=88.31  E-value=0.19  Score=30.16  Aligned_cols=30  Identities=20%  Similarity=0.136  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~   32 (287)
                      |+|.+|+-++....+-|++|++++-+++..
T Consensus         8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             BCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             cCCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            689999999999999999999999876653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.19  E-value=0.28  Score=34.06  Aligned_cols=87  Identities=9%  Similarity=0.100  Sum_probs=48.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEEEc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi~~   79 (287)
                      |+|.+|...++.+...|.+|+++++++.+....         .+.... +++  |..+.   +.+.+...  +.+.++.+
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a---------~~~Ga~-~~i--~~~~~~~~~~~~~~~~--g~~~~i~~  100 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELA---------RKLGAS-LTV--NARQEDPVEAIQRDIG--GAHGVLVT  100 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHTTCS-EEE--ETTTSCHHHHHHHHHS--SEEEEEEC
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhHHHhh---------hccCcc-ccc--cccchhHHHHHHHhhc--CCcccccc
Confidence            458999998888888899999999987662111         111121 222  33333   33333333  56666655


Q ss_pred             cCCCccchHHHHHhCCCCCcEEEEe
Q 023078           80 NGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ++.. ......++.++...+++.++
T Consensus       101 ~~~~-~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         101 AVSN-SAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             CSCH-HHHHHHHTTEEEEEEEEECC
T ss_pred             cccc-hHHHHHHHHhcCCcEEEEEE
Confidence            5442 33444455555445666554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.09  E-value=0.22  Score=35.60  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=25.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|.||+.+++.|..-|.+|...++....
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cccccchhhhhhhhccCceEEEEeecccc
Confidence            67999999999999999999999986543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.04  E-value=0.18  Score=35.99  Aligned_cols=30  Identities=20%  Similarity=0.259  Sum_probs=25.8

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      .|.|.||+.+++.|..-|.+|.+.++...+
T Consensus        50 iG~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          50 VGLGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             ECCSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccchhHHHHHHhhhccceEEeecCCCCh
Confidence            367999999999999889999999987554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.99  E-value=0.26  Score=32.23  Aligned_cols=29  Identities=24%  Similarity=0.339  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|+||-.++..|.+.|.+|+++.|++.-
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            68999999999999999999999998653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.93  E-value=0.21  Score=32.87  Aligned_cols=28  Identities=39%  Similarity=0.600  Sum_probs=25.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~   30 (287)
                      |+|++|-.++..|.+.|.+|+++.|.+.
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcHHHHHHHHHhhcccceEEEEecccc
Confidence            7899999999999999999999998754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.86  E-value=0.28  Score=33.66  Aligned_cols=29  Identities=28%  Similarity=0.390  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      +.||+|..++..|.+.|.+|+++.+.+.-
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            67999999999999999999999997543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=87.46  E-value=0.13  Score=35.37  Aligned_cols=29  Identities=24%  Similarity=0.351  Sum_probs=25.9

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (287)
                      |+|.+|+++++.|++.| ++|++.+|++++
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            56999999999999887 999999998766

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.40  E-value=0.26  Score=32.41  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=24.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~   28 (287)
                      |+|++|..++..|.+.|.+|+++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            68999999999999999999999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.32  E-value=0.22  Score=32.35  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            78999999999999999999999997643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=87.24  E-value=0.21  Score=33.98  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=24.6

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (287)
                      +|+ |.+|+.++-.|..++ .++.+++.+++.
T Consensus         7 IGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           7 IGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            465 999999999988876 489999887765

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.19  E-value=0.24  Score=32.34  Aligned_cols=29  Identities=28%  Similarity=0.497  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhccc
Confidence            68999999999999999999999998643

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.73  E-value=0.3  Score=31.72  Aligned_cols=29  Identities=34%  Similarity=0.516  Sum_probs=26.5

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|..++..|.+.|.+|+++.|.+.-
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            68999999999999999999999998644

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.55  E-value=0.31  Score=32.17  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=26.4

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.|++.-
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            68999999999999999999999998643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.52  E-value=0.43  Score=33.02  Aligned_cols=88  Identities=11%  Similarity=0.091  Sum_probs=51.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecC-CC-hHHHHhhhccCCccEEEEcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KD-YDFVKSSLSAKGFDVVYDIN   80 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~-~~~~~~~~~~~~~d~vi~~a   80 (287)
                      |+|-+|...++.+...|.+|+++++++.+.. .        ..+  -+...+...- .+ .+.+.+..+  +.+.+|.++
T Consensus        35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-~--------~k~--~Ga~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~  101 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-L--------AKE--LGADLVVNPLKEDAAKFMKEKVG--GVHAAVVTA  101 (168)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-H--------HHH--TTCSEEECTTTSCHHHHHHHHHS--SEEEEEESS
T ss_pred             ecccchhhhhHHHhcCCCeEeccCCCHHHhh-h--------hhh--cCcceecccccchhhhhcccccC--CCceEEeec
Confidence            5689999988888888999999998876621 1        111  2333322211 12 234444444  667777665


Q ss_pred             CCCccchHHHHHhCCCCCcEEEEe
Q 023078           81 GREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        81 ~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      +. .......+++++...+++.++
T Consensus       102 ~~-~~~~~~a~~~l~~~G~i~~~g  124 (168)
T d1rjwa2         102 VS-KPAFQSAYNSIRRGGACVLVG  124 (168)
T ss_dssp             CC-HHHHHHHHHHEEEEEEEEECC
T ss_pred             CC-HHHHHHHHHHhccCCceEecc
Confidence            42 344556666776444555443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=86.45  E-value=0.35  Score=33.85  Aligned_cols=91  Identities=16%  Similarity=0.163  Sum_probs=51.5

Q ss_pred             cccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|...++.+...| ..|++.++++.+.. ..        .+. ...+++..+-.+.+...+.....++|+||.+++
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~-~~--------~~~-ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLK-LA--------ERL-GADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HH--------HHT-TCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHHH-HH--------hhc-ccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            46999999999887777 46777777765421 11        111 122333322222344444444457999999888


Q ss_pred             CCccchHHHHHhCCCCCcEEEEe
Q 023078           82 READEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      ... .....++.++...+++.++
T Consensus       110 ~~~-~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         110 SQA-TVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             CHH-HHHHGGGGEEEEEEEEECC
T ss_pred             cch-HHHHHHHHHhCCCEEEEEe
Confidence            532 2233444555445666554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=86.27  E-value=0.39  Score=32.60  Aligned_cols=30  Identities=20%  Similarity=0.299  Sum_probs=25.3

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (287)
                      +|+ |.+|++++..|..++  .++.++++++..
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~   38 (143)
T d1llda1           7 IGA-GAVGSTLAFAAAQRGIAREIVLEDIAKER   38 (143)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence            475 999999999999887  489999987755

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=86.01  E-value=0.24  Score=34.13  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=24.1

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (287)
                      +|+ |.+|+.++..|..++ .++++++.++..
T Consensus        13 IGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1          13 IGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            365 999999998888777 489888877654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.57  E-value=1.6  Score=29.03  Aligned_cols=26  Identities=12%  Similarity=0.197  Sum_probs=20.8

Q ss_pred             CCcccchHHHHHHHHHHC-CCeEEEEe
Q 023078            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT   26 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~-g~~V~~l~   26 (287)
                      .|++|..|+.+++.+.+. ++++.+..
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            489999999999998775 57766543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=85.46  E-value=0.77  Score=32.03  Aligned_cols=88  Identities=13%  Similarity=0.137  Sum_probs=49.0

Q ss_pred             CcccchHHHHHHHHHHCCCeE-EEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCCh---HHHHhhhccCCccEEE
Q 023078            2 GGTRFIGVFLSRLLVKEGHQV-TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V-~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~d~vi   77 (287)
                      |+ |.+|...++.+...|.++ ++.++++.+.. ..        .+... .+++  |..++   +.+.++.. -++|+||
T Consensus        36 G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~-~a--------~~~Ga-~~~i--~~~~~~~~~~i~~~t~-gg~D~vi  101 (174)
T d1f8fa2          36 GA-GAVGLSALLAAKVCGASIIIAVDIVESRLE-LA--------KQLGA-THVI--NSKTQDPVAAIKEITD-GGVNFAL  101 (174)
T ss_dssp             SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HH--------HHHTC-SEEE--ETTTSCHHHHHHHHTT-SCEEEEE
T ss_pred             CC-CHHHhhhhhcccccccceeeeeccHHHHHH-HH--------HHcCC-eEEE--eCCCcCHHHHHHHHcC-CCCcEEE
Confidence            54 899999998888888755 55565554421 11        11111 2333  33333   33333333 3799999


Q ss_pred             EccCCCccchHHHHHhCCCCCcEEEEe
Q 023078           78 DINGREADEVEPILDALPNLEQFIYCS  104 (287)
Q Consensus        78 ~~a~~~~~~~~~l~~a~~~~~~~i~~S  104 (287)
                      .+.|.. ......++.++...+++.++
T Consensus       102 d~~G~~-~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         102 ESTGSP-EILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             ECSCCH-HHHHHHHHTEEEEEEEEECC
T ss_pred             EcCCcH-HHHHHHHhcccCceEEEEEe
Confidence            998743 22344456666445666555

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.43  E-value=0.46  Score=31.68  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=26.8

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.+.+..
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            68999999999999999999999998764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.37  E-value=0.28  Score=33.24  Aligned_cols=30  Identities=20%  Similarity=0.246  Sum_probs=24.5

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (287)
                      +|| |.+|+.++..|+.++  .++.+++.++.+
T Consensus         6 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~   37 (140)
T d1a5za1           6 VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKR   37 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             ECc-CHHHHHHHHHHHhCCCCCEEEEEeccccc
Confidence            475 999999999888876  589999987654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.20  E-value=0.33  Score=31.96  Aligned_cols=29  Identities=21%  Similarity=0.360  Sum_probs=26.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.|++.-
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            68999999999999999999999998655

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=85.19  E-value=1.9  Score=29.80  Aligned_cols=89  Identities=17%  Similarity=0.130  Sum_probs=50.2

Q ss_pred             CcccchHHHHHHHHHHCC-CeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC-hHHHHhhhccCCccEEEEc
Q 023078            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~vi~~   79 (287)
                      |+ |-+|...+..+...| ..|++.++++++.....         +......+...+..+ .+.........++|++|.+
T Consensus        36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~---------~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~  105 (176)
T d2jhfa2          36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK---------EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV  105 (176)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH---------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH---------HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence            66 558999999888887 58888888877632111         111111111222222 2344444444589999998


Q ss_pred             cCCCccchHHHHHhCC-CCCcEE
Q 023078           80 NGREADEVEPILDALP-NLEQFI  101 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~-~~~~~i  101 (287)
                      .|... .....++.++ +...++
T Consensus       106 ~G~~~-~~~~a~~~~~~~~g~~~  127 (176)
T d2jhfa2         106 IGRLD-TMVTALSCCQEAYGVSV  127 (176)
T ss_dssp             SCCHH-HHHHHHHHBCTTTCEEE
T ss_pred             CCchh-HHHHHHHHHhcCCcceE
Confidence            87542 2334455565 433443

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=85.05  E-value=2.5  Score=29.33  Aligned_cols=91  Identities=13%  Similarity=0.106  Sum_probs=54.4

Q ss_pred             cccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCC--ChHHHHhhhccCCccEEEEc
Q 023078            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--DYDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~d~vi~~   79 (287)
                      |.|.+|...++.+...|. .|++.++++.+.. .        -.++.. ..++...-.  ......+.....++|++|.+
T Consensus        36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~--------a~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFP-K--------AKALGA-TDCLNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-H--------HHHTTC-SEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCChHHHHHHHHHHHhCCceeeeeccchHHHH-H--------HHHhCC-CcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            469999999999999996 6778888766521 0        011111 122222111  23344444455689999999


Q ss_pred             cCCCccchHHHHHhCC-CCCcEEEEe
Q 023078           80 NGREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~-~~~~~i~~S  104 (287)
                      +|... .....++.++ +-.+++.++
T Consensus       106 ~G~~~-~~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2         106 AGTAQ-TLKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             SCCHH-HHHHHHHTBCTTTCEEEECC
T ss_pred             cccch-HHHHHHHHhhcCCeEEEecC
Confidence            88542 3445556666 446777665

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=84.34  E-value=0.19  Score=35.00  Aligned_cols=30  Identities=10%  Similarity=0.121  Sum_probs=25.1

Q ss_pred             CCcccchHHHHHHHHHHCCC--eEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (287)
                      +|+ |.+|+.++..|..+|.  ++.+++++++.
T Consensus        26 IGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          26 VGV-GQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            364 9999999999999984  89999987655

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.20  E-value=0.37  Score=33.02  Aligned_cols=30  Identities=30%  Similarity=0.483  Sum_probs=23.8

Q ss_pred             CCcccchHHHHHHHHHHCC-CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~   31 (287)
                      +| +|.+|+.++..|..++ .++.++++++..
T Consensus         9 IG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           9 VG-SGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             EC-CCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            36 4999999998777776 588889887755

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.90  E-value=0.33  Score=33.40  Aligned_cols=28  Identities=14%  Similarity=0.186  Sum_probs=22.7

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |.|..|..++++|++.|+.+ ...|+.++
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            56999999999999988865 56776655

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.84  E-value=0.41  Score=31.60  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=26.3

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~   31 (287)
                      |+|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            68999999999999999999999997644

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.50  E-value=0.44  Score=33.02  Aligned_cols=72  Identities=10%  Similarity=-0.025  Sum_probs=50.1

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|.+|+.+++.|...|.+|.+...++..+.+..           -.+...        ..+.+++.  ..|+|+-+.|.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-----------~dG~~v--------~~~~~a~~--~adivvtaTGn   89 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINALQAA-----------MEGYEV--------TTMDEACQ--EGNIFVTTTGC   89 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE--------CCHHHHTT--TCSEEEECSSC
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhHHhh-----------cCceEe--------eehhhhhh--hccEEEecCCC
Confidence            6799999999999999999999999875532111           123322        23456666  78999988876


Q ss_pred             CccchHHHHHhCC
Q 023078           83 EADEVEPILDALP   95 (287)
Q Consensus        83 ~~~~~~~l~~a~~   95 (287)
                      ...-...-++.++
T Consensus        90 ~~vI~~eh~~~MK  102 (163)
T d1li4a1          90 IDIILGRHFEQMK  102 (163)
T ss_dssp             SCSBCHHHHTTCC
T ss_pred             ccchhHHHHHhcc
Confidence            4444555666666

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=83.36  E-value=0.19  Score=35.15  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=56.2

Q ss_pred             cccchHHHHHHHHHHCCCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccCC
Q 023078            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~~   82 (287)
                      |.|-.|..=++.+.+.|.+|++++.+.+... .+.       ..+...++.   -..+.+.+.+.++  ++|+||.++-.
T Consensus        39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~-~l~-------~~~~~~~~~---~~~~~~~l~~~~~--~aDivI~aali  105 (168)
T d1pjca1          39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLS-YLE-------TLFGSRVEL---LYSNSAEIETAVA--EADLLIGAVLV  105 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHH-------HHHGGGSEE---EECCHHHHHHHHH--TCSEEEECCCC
T ss_pred             CCChHHHHHHHHHhhCCCEEEEEeCcHHHHH-HHH-------Hhhccccee---ehhhhhhHHHhhc--cCcEEEEeeec
Confidence            5688999999999999999999999876632 111       111223333   3456788888898  89999988754


Q ss_pred             Cc-----cchHHHHHhCC
Q 023078           83 EA-----DEVEPILDALP   95 (287)
Q Consensus        83 ~~-----~~~~~l~~a~~   95 (287)
                      ..     --++..++.++
T Consensus       106 pG~~aP~lIt~~mv~~Mk  123 (168)
T d1pjca1         106 PGRRAPILVPASLVEQMR  123 (168)
T ss_dssp             TTSSCCCCBCHHHHTTSC
T ss_pred             CCcccCeeecHHHHhhcC
Confidence            32     23677888887

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.16  E-value=1  Score=31.25  Aligned_cols=76  Identities=13%  Similarity=0.182  Sum_probs=43.6

Q ss_pred             cccchHHHHHHHHHHC-CCeEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCChHHHHhhhccCCccEEEEccC
Q 023078            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (287)
Q Consensus         3 atG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~vi~~a~   81 (287)
                      |+|.+|+..++.|.+. +.+++++.........               ......     ..+......  ++|+|+.+..
T Consensus        10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------------~~~~~~-----~~~~~~~~~--~~D~Vvi~tp   67 (170)
T d1f06a1          10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------------KTPVFD-----VADVDKHAD--DVDVLFLCMG   67 (170)
T ss_dssp             CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------------SSCEEE-----GGGGGGTTT--TCSEEEECSC
T ss_pred             CChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------------cccccc-----chhhhhhcc--ccceEEEeCC
Confidence            5799999999999876 5787776654433111               111111     112233444  8999997766


Q ss_pred             CCccchHHHHHhCCCCCcEE
Q 023078           82 READEVEPILDALPNLEQFI  101 (287)
Q Consensus        82 ~~~~~~~~l~~a~~~~~~~i  101 (287)
                      ... ....+..+++.-+++|
T Consensus        68 ~~~-h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          68 SAT-DIPEQAPKFAQFACTV   86 (170)
T ss_dssp             TTT-HHHHHHHHHTTTSEEE
T ss_pred             Ccc-cHHHHHHHHHCCCcEE
Confidence            553 3444555566334444

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=83.10  E-value=0.33  Score=33.82  Aligned_cols=29  Identities=17%  Similarity=0.368  Sum_probs=24.9

Q ss_pred             cccchHHHHHHHHHHCCC--eEEEEecCCcc
Q 023078            3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (287)
Q Consensus         3 atG~iG~~l~~~L~~~g~--~V~~l~r~~~~   31 (287)
                      |.|.+|..+++.|.+.|+  +|++.+++++.
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            579999999999999985  78888888655

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.87  E-value=0.21  Score=34.65  Aligned_cols=30  Identities=13%  Similarity=0.236  Sum_probs=24.8

Q ss_pred             CCcccchHHHHHHHHHHCC--CeEEEEecCCcc
Q 023078            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (287)
Q Consensus         1 tGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~   31 (287)
                      +|+ |.+|..++..|..+|  .+++++++++..
T Consensus        25 IGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          25 VGV-GDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             ECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            364 999999999999887  489999987654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.51  E-value=0.88  Score=32.50  Aligned_cols=67  Identities=15%  Similarity=0.038  Sum_probs=41.7

Q ss_pred             ccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCcEEEEecCCC---hHHHHhhhccCCccEEEEc
Q 023078            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~d~vi~~   79 (287)
                      +|.+|...+..+...|. +|++.++++.+.. ..        .  .-+...+. |..+   .+.+.++....++|++|.+
T Consensus        34 aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~-~a--------~--~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          34 AGPVGLAAAASARLLGAAVVIVGDLNPARLA-HA--------K--AQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HH--------H--HTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             cCHHHHHHHHHHHhhcccceeeecccchhhH-hh--------h--hccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            58999887777776764 7888888766521 11        1  12333322 3322   2455555566689999999


Q ss_pred             cCC
Q 023078           80 NGR   82 (287)
Q Consensus        80 a~~   82 (287)
                      .|.
T Consensus       102 vG~  104 (195)
T d1kola2         102 VGF  104 (195)
T ss_dssp             CCT
T ss_pred             ccc
Confidence            874

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.55  E-value=2  Score=29.82  Aligned_cols=27  Identities=22%  Similarity=0.348  Sum_probs=18.2

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEecC
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTRG   28 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r~   28 (287)
                      |.|..+|+.|+..|+++|..|+.....
T Consensus        46 GrS~iVGrPLa~lL~~~gatVt~~~~~   72 (170)
T d1a4ia1          46 GRSKIVGAPMHDLLLWNNATVTTCHSK   72 (170)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             ecCCccchHHHHHHHhccCceEEEecc
Confidence            566677777777777777666665543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=80.45  E-value=4.7  Score=27.77  Aligned_cols=89  Identities=13%  Similarity=0.014  Sum_probs=52.7

Q ss_pred             ccchHHHHHHHHHHCCC-eEEEEecCCccccccCCCCCchhhhhhcCCc-EEEEecCCC--hHHHHhhhccCCccEEEEc
Q 023078            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (287)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~--~~~~~~~~~~~~~d~vi~~   79 (287)
                      .|-+|...++.+...|. +|++.++++++....         .+  -+. .++...-.|  .+.........+.|++|.+
T Consensus        36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a---------~~--lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA---------IE--LGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH---------HH--TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCchhHHHHHHHHHcCCceeeccCChHHHHHHH---------HH--cCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            48899999999988885 788888887663111         11  122 222211112  2344444444589999998


Q ss_pred             cCCCccchHHHHHhCC-CCCcEEEEe
Q 023078           80 NGREADEVEPILDALP-NLEQFIYCS  104 (287)
Q Consensus        80 a~~~~~~~~~l~~a~~-~~~~~i~~S  104 (287)
                      .+.. ......++.++ +-.+++.++
T Consensus       105 ~g~~-~~~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2         105 AGRI-ETMMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             SCCH-HHHHHHHHTBCTTTCEEEECC
T ss_pred             CCCc-hHHHHHHHHHHHhcCceEEEE
Confidence            8753 23344555555 455676555

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=80.35  E-value=1.2  Score=30.79  Aligned_cols=26  Identities=27%  Similarity=0.383  Sum_probs=17.6

Q ss_pred             CcccchHHHHHHHHHHCCCeEEEEec
Q 023078            2 GGTRFIGVFLSRLLVKEGHQVTLFTR   27 (287)
Q Consensus         2 GatG~iG~~l~~~L~~~g~~V~~l~r   27 (287)
                      |-+..+|+.|+..|.++|.+|+....
T Consensus        44 GrS~~VG~Pla~lL~~~gatVt~~h~   69 (166)
T d1b0aa1          44 GASNIVGRPMSMELLLAGCTTTVTHR   69 (166)
T ss_dssp             CCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             eccccccHHHHHHHHHhhcccccccc
Confidence            56667777777777777777665543